BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006973
(623 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225457192|ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Vitis vinifera]
Length = 625
Score = 1019 bits (2635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/625 (76%), Positives = 552/625 (88%), Gaps = 4/625 (0%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M K+++P+ ISTILSNPSPDSS+++PEI+VQV+DL GNRY F A+DGK +LKA+ PS+
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
SSE+ SGNIQN GLI+++DY LN+IP+K EKYLIVTKCE VSPALE+E K EVKS+E+G
Sbjct: 61 FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVKSEETG 120
Query: 121 IIFKPKQ----EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHP 176
I+ +PKQ + EVK +G GI LKPKQE+VAKSAAQI+ +Q+GNMAPAAR+AMTRRVHP
Sbjct: 121 ILLRPKQVVEIQREVKTEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHP 180
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
LVSLNPYQGNWTIKVR+T+KG MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF
Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 240
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
Y++FQLGKVYYIS+G L+VANKQFKTVQNDYEM LNENSEVEEA NE FIP+ KF FV
Sbjct: 241 YEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVE 300
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I+ELG YVNG ELVD+IGVVQ+VSPTMSIRRKSNN++VPKRDIT+AD+TK+TV VSLWN+
Sbjct: 301 IEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWND 360
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
ATNVGQELLDNADK PIVAIKSLKVGDFQG+SLSTL +S VLV+PD PE+KKL+SWY+S
Sbjct: 361 HATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDS 420
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP 476
EGKG SMASIGS + +K G +SMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKP
Sbjct: 421 EGKGASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKP 480
Query: 477 DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNE 536
DQ MWYRACKTCNKKVTDA+GSGYWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FNE
Sbjct: 481 DQTMWYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNE 540
Query: 537 EAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVR 596
+AER+ GCSADEL++LKSQ G++N +Q KLKE WVPHL R+SVAQ EY NEKRQR+T R
Sbjct: 541 QAERMFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITAR 600
Query: 597 AVAPVDFAAESKFLLEEISKKVSHQ 621
AV PVDFAAES+ LLEEISK + Q
Sbjct: 601 AVVPVDFAAESRLLLEEISKMKTSQ 625
>gi|255547187|ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1, putative [Ricinus communis]
Length = 622
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/618 (77%), Positives = 550/618 (88%), Gaps = 3/618 (0%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M K VSPDAI+ +LSNP PDS SDIPEI+VQ+ +L+ G Y F+A+DGK+++KAI S
Sbjct: 1 MGKRVSPDAIAALLSNPKPDSISDIPEIIVQITNLEPKGKSYGFDANDGKRKIKAIFNSR 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
LS+E+ISGNIQN GLIR+LDY +NEIP+KSE YLI+TKCEVVSPALEMEIK E K++E+
Sbjct: 61 LSTEIISGNIQNLGLIRILDYTVNEIPSKSENYLIITKCEVVSPALEMEIKDEAKTEEAA 120
Query: 121 IIFKPKQEDEVKKD--GPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLV 178
I KPKQE +V K GI+LKPKQEMVAKSAAQI+ +Q+ NMAP AR+AMTRRVHPLV
Sbjct: 121 ITLKPKQETQVIKQEVSGGILLKPKQEMVAKSAAQIVHEQHKNMAPTARMAMTRRVHPLV 180
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD
Sbjct: 181 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 240
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+FQLGKVYYIS+G+L+VANKQF+TVQNDYEMNLNENS+VEEA +E AFIP+TKFNFVPID
Sbjct: 241 KFQLGKVYYISKGSLKVANKQFRTVQNDYEMNLNENSQVEEASDEAAFIPETKFNFVPID 300
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+LG YV+ ELVD+IGVVQ+VSPTMSIRRKSNN++VPKRDIT+ADETK+TV VSLWN+LA
Sbjct: 301 QLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADETKKTVVVSLWNDLA 360
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
T+VGQELLD ADKSP+VAIK+LKVGDFQG+SLSTLGRS + V+PD PE+KKLKSW++SEG
Sbjct: 361 TDVGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQVNPDTPESKKLKSWFDSEG 420
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQ 478
K TS+AS+G+GL K+G SMYSDRVS++HITSNPSLG +KP FFSI+AYIS IKPDQ
Sbjct: 421 KETSLASVGAGLSPSTKSGGGSMYSDRVSISHITSNPSLGSDKPAFFSIRAYISFIKPDQ 480
Query: 479 AMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
+MWYRACKTCNKKVT+A+G GYWCEGCQKND ECSLRYIMV +V D SGE W+S FN E
Sbjct: 481 SMWYRACKTCNKKVTEAIGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGWVSAFNNEG 540
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
ERIIGCSADEL++LKSQ D NSY++KLKE TW PHL RVSVAQ EYNNEKRQR+TVRAV
Sbjct: 541 ERIIGCSADELDKLKSQ-EDGNSYELKLKEATWSPHLFRVSVAQNEYNNEKRQRITVRAV 599
Query: 599 APVDFAAESKFLLEEISK 616
AP+DFAAES+FLLEEISK
Sbjct: 600 APLDFAAESRFLLEEISK 617
>gi|147778951|emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
Length = 634
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/634 (74%), Positives = 550/634 (86%), Gaps = 13/634 (2%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M K+++P+ ISTILSNPSPDSS+++PEI+VQV+DL GNRY F A+DGK +LKA+ PS+
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
SSE+ SGNIQN GLI+++DY LN+IP+K EKYLIVTKCE VSPALE+E K EVKS+E+G
Sbjct: 61 FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVKSEETG 120
Query: 121 IIFKPKQ----EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHP 176
I+ PKQ + EVK +G GI LKPKQE+VAKSAAQI+ +Q+GNMAPAAR+AMTRRVHP
Sbjct: 121 ILLXPKQVVEIQXEVKXEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHP 180
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
LVSLNPYQGNWTIKVR+T+KG MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF
Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 240
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
Y++FQLGKVYYIS+G L+VANKQFKTVQNDYEM LNENSEVEEA NE FIP+ KF FV
Sbjct: 241 YEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVE 300
Query: 297 IDELGRYVNGTELV---------DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
I+ELG YVNG ELV D+IGVVQ+VSPTMSIRRKSNN++VPKRDIT+AD+TK+
Sbjct: 301 IEELGPYVNGKELVGPLTSLLIPDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKK 360
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
TV VSLWN+ ATNVGQELLDNADK PIVAIKSLKVGDFQG+SLSTL +S VLV+PD PE+
Sbjct: 361 TVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPES 420
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
KKL+SWY+SEGKG SMASIGS + +K G SMY DRVSL+H+TSNPSLG++KP FFSI
Sbjct: 421 KKLRSWYDSEGKGASMASIGSDISPSSKGGVXSMYYDRVSLSHVTSNPSLGEDKPSFFSI 480
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+AYIS IKPDQ MWYRACKTCNKKVTDA+GSGYWCEGCQKND+ECSLRYIMV +V D SG
Sbjct: 481 RAYISFIKPDQTMWYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASG 540
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
EAW+S+FNE+AER+ GCSADEL++LKSQ G++N +Q KLKE WVPHL R+SVAQ EY N
Sbjct: 541 EAWLSLFNEQAERMFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMN 600
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQ 621
EKRQR+T RAV PVDFAAES+ LLEEISK + Q
Sbjct: 601 EKRQRITARAVVPVDFAAESRLLLEEISKMKTSQ 634
>gi|149676205|dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/616 (75%), Positives = 539/616 (87%), Gaps = 17/616 (2%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M+++V+PDAIS IL+NPSPDS SD+PE++VQV+DLK GNRYMF A+DGK +LKAIL S+
Sbjct: 1 MERSVTPDAISAILANPSPDSGSDLPELIVQVVDLKQAGNRYMFTANDGKMKLKAILQSS 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
LSSEVISG+IQN GL+R+LDY LN+IP K+EKYLIVTKC+ VS LE E K VK++E+G
Sbjct: 61 LSSEVISGSIQNLGLVRILDYTLNDIPMKNEKYLIVTKCDAVSSPLEAEYKTGVKTEENG 120
Query: 121 IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
I VL+PKQE VAKSAAQI+ +QNGN+ P ARLAMTRR+HPLVSL
Sbjct: 121 I-----------------VLRPKQEFVAKSAAQIVHEQNGNIVPPARLAMTRRIHPLVSL 163
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQG WTIKVRVTSKGNMR YKNARGEGCVFNVEL D+DGT+IQATMFN+AARKFYD+F
Sbjct: 164 NPYQGIWTIKVRVTSKGNMRFYKNARGEGCVFNVELADQDGTEIQATMFNQAARKFYDKF 223
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+LGKVYYIS+GTLRVANKQFKTVQNDYEM LNENSEVEEA+NE AF+P+TKFNFV IDEL
Sbjct: 224 ELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEAINEAAFVPETKFNFVAIDEL 283
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YVNG ELVD+IGVVQNVS TMSIRRKSNNEM+PKRDIT+ADETK+TV VSLW++LATN
Sbjct: 284 GSYVNGRELVDVIGVVQNVSSTMSIRRKSNNEMIPKRDITIADETKKTVVVSLWSDLATN 343
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
VGQELLD ADKSP+VAI+S+KVGDFQG+SLS + RSTVLV+PD+PEAKKL+SWY+ EGK
Sbjct: 344 VGQELLDMADKSPVVAIRSVKVGDFQGLSLSAITRSTVLVNPDMPEAKKLRSWYDCEGKE 403
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
TS+ S+GSGL S AK SMYSDRVSL HITSNP+LG++KPVFFSIKA IS IKP+QAM
Sbjct: 404 TSLTSVGSGLSSSAKGVLWSMYSDRVSLLHITSNPNLGEDKPVFFSIKANISFIKPEQAM 463
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVT+A+GSGYWCEGCQKND +CSLRYI+ RV D SGEAW+S+FNE+AE+
Sbjct: 464 WYRACKTCNKKVTEAIGSGYWCEGCQKNDTDCSLRYIVAMRVSDTSGEAWLSVFNEQAEK 523
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
IIGCSADEL+ L+SQ GD ++YQMKLKE TWVP+L RVSV QEYNNEKRQR+TVRA AP
Sbjct: 524 IIGCSADELDRLRSQDGDSSAYQMKLKEATWVPYLFRVSVTPQEYNNEKRQRITVRAAAP 583
Query: 601 VDFAAESKFLLEEISK 616
VDFAAES++ LEE++K
Sbjct: 584 VDFAAESRYFLEEMAK 599
>gi|297733862|emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/621 (74%), Positives = 535/621 (86%), Gaps = 19/621 (3%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M K+++P+ ISTILSNPSPDSS+++PEI+VQV+DL GNRY F A+DGK +LKA+ PS+
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
SSE+ SGNIQN GLI+++DY LN+IP+K EKYLIVTKCE VSPALE+E K EVK
Sbjct: 61 FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVKRT--- 117
Query: 121 IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
GI LKPKQE+VAKSAAQI+ +Q+GNMAPAAR+AMTRRVHPLVSL
Sbjct: 118 ----------------GIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHPLVSL 161
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQGNWTIKVR+T+KG MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY++F
Sbjct: 162 NPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKF 221
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
QLGKVYYIS+G L+VANKQFKTVQNDYEM LNENSEVEEA NE FIP+ KF FV I+EL
Sbjct: 222 QLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVEIEEL 281
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YVNG ELVD+IGVVQ+VSPTMSIRRKSNN++VPKRDIT+AD+TK+TV VSLWN+ ATN
Sbjct: 282 GPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATN 341
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
VGQELLDNADK PIVAIKSLKVGDFQG+SLSTL +S VLV+PD PE+KKL+SWY+SEGKG
Sbjct: 342 VGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKG 401
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
SMASIGS + +K G +SMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKPDQ M
Sbjct: 402 ASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTM 461
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVTDA+GSGYWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FNE+AER
Sbjct: 462 WYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAER 521
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
+ GCSADEL++LKSQ G++N +Q KLKE WVPHL R+SVAQ EY NEKRQR+T RAV P
Sbjct: 522 MFGCSADELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVP 581
Query: 601 VDFAAESKFLLEEISKKVSHQ 621
VDFAAES+ LLEEISK + Q
Sbjct: 582 VDFAAESRLLLEEISKMKTSQ 602
>gi|224130162|ref|XP_002328669.1| predicted protein [Populus trichocarpa]
gi|222838845|gb|EEE77196.1| predicted protein [Populus trichocarpa]
Length = 603
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/616 (75%), Positives = 533/616 (86%), Gaps = 22/616 (3%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
++K+VSPD IS +LS P PDS + +PEI++QV +L+ G Y F+ASDGK ++KAI S
Sbjct: 5 IEKSVSPDGISKMLSIPKPDSFTHLPEIILQVTNLEPKGKSYGFDASDGKMKIKAIFSSR 64
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
LSSE++SGNIQN LIR+LDY +NEIP+KSEK+LI+TKCEVVSPALE EIK E K
Sbjct: 65 LSSEILSGNIQNLCLIRVLDYTVNEIPSKSEKFLIITKCEVVSPALEKEIKEEAK----- 119
Query: 121 IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
G++LKPKQE+VAKSAAQI+ +Q+GNMAPAAR+AMTRRVHPLVSL
Sbjct: 120 ----------------GLILKPKQEIVAKSAAQIVHEQHGNMAPAARMAMTRRVHPLVSL 163
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQGNWTIKVRVTSKGNMRTY+NARGEGCVFNVELTD DGTQIQATMFNEAA+KFYDRF
Sbjct: 164 NPYQGNWTIKVRVTSKGNMRTYRNARGEGCVFNVELTDGDGTQIQATMFNEAAKKFYDRF 223
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+LGKVYYIS+GTLRVANKQFKTVQNDYEM LNENSEVEEA +E A IP+TKF FVPID+L
Sbjct: 224 ELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEASDEAACIPETKFKFVPIDQL 283
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YVN +LVD+IG+VQ+VSPT SIRRKSNNE VPKRDI VADETK+TV VSLWNELAT+
Sbjct: 284 GPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPKRDIVVADETKKTVVVSLWNELATS 343
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
VGQEL D ADKSP+VAIKSLKVGDFQGISLSTLG+S V V+P + E++KL++WY+SEGK
Sbjct: 344 VGQELHDIADKSPVVAIKSLKVGDFQGISLSTLGKSIVQVNPVIAESEKLRNWYDSEGKE 403
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
TSMAS+GSGL K+GARSMYSDRVSL+HITSNPSLG++KP FFSI+AYIS IKPDQ M
Sbjct: 404 TSMASVGSGLSPSTKSGARSMYSDRVSLSHITSNPSLGEDKPAFFSIRAYISFIKPDQTM 463
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVTDALG GYWCEGCQKND ECSLRYIMV +V DGSGE W+S FNEEAE+
Sbjct: 464 WYRACKTCNKKVTDALGGGYWCEGCQKNDAECSLRYIMVVKVSDGSGEGWVSAFNEEAEK 523
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
IIGCSADEL+ LKSQ+ ++N+YQ +LKE TW PHLLR+SV+Q EYNNEKRQR+TVRAVAP
Sbjct: 524 IIGCSADELDLLKSQI-EENTYQQRLKEATWNPHLLRISVSQNEYNNEKRQRMTVRAVAP 582
Query: 601 VDFAAESKFLLEEISK 616
VDFAAES+FLLEEISK
Sbjct: 583 VDFAAESRFLLEEISK 598
>gi|356511809|ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 620
Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/616 (73%), Positives = 534/616 (86%), Gaps = 4/616 (0%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLS 62
KTV+PDA+ST+L+NPSPDS+SD+P+IVVQVLDLK TGN+YMF A+DGK +LKA++PS++
Sbjct: 4 KTVTPDAVSTLLANPSPDSTSDLPDIVVQVLDLKATGNKYMFTANDGKTKLKAMIPSDMR 63
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
S+V+SG IQN GLIR+LDY +N+IP KS+KYL+ KCE VSPALEMEIK E SGI+
Sbjct: 64 SQVLSGAIQNLGLIRVLDYTVNDIPNKSDKYLLAIKCEAVSPALEMEIKSE--ESGSGIL 121
Query: 123 FKPKQEDEVKKDGP--GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
KPK E VK +G GI+LKPKQE+V KSA QILR+Q+GN APAAR+AMTRRV PLVSL
Sbjct: 122 LKPKVEGGVKTEGAAAGILLKPKQEVVTKSANQILREQHGNSAPAARMAMTRRVRPLVSL 181
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQGNWTIKV VTSKGNMRTYKNARG+GCVFNVELTDEDGTQIQATMFN AARKF+D+F
Sbjct: 182 NPYQGNWTIKVSVTSKGNMRTYKNARGDGCVFNVELTDEDGTQIQATMFNNAARKFFDKF 241
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
LGKVYYISRGTL+VANKQFKTVQNDYEM LNENSEVEE V E +F+P+TKFNFV ID+L
Sbjct: 242 VLGKVYYISRGTLKVANKQFKTVQNDYEMTLNENSEVEEVVGEASFVPETKFNFVQIDQL 301
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G +VN +ELVD+IGVV+NVS TMSIRRKS+NE +PKRDIT+AD+TK+TV VSLWNELAT
Sbjct: 302 GPHVNKSELVDVIGVVKNVSSTMSIRRKSDNESIPKRDITIADDTKKTVVVSLWNELATT 361
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
G+ELLD DKSP+VAIKSLKVGDFQG+SLST+GRS VLV+PD+PEAK L+SWY+ EGK
Sbjct: 362 TGEELLDIVDKSPVVAIKSLKVGDFQGVSLSTIGRSVVLVNPDIPEAKNLRSWYDFEGKD 421
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
+M S+GSG ++ NG RS+Y+DR+ L+ I SNPSLGD KP FFS++ +I+ IKPDQAM
Sbjct: 422 AAMDSVGSGSSPISNNGIRSVYTDRIHLSDIISNPSLGDGKPAFFSLRGHITFIKPDQAM 481
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVT++ GSGYWC+GCQK+DE+CSLRYIMVA+V DGS E +IS+FN+EAE+
Sbjct: 482 WYRACKTCNKKVTESFGSGYWCDGCQKSDEQCSLRYIMVAKVSDGSAETFISVFNQEAEK 541
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
I+GCSAD+L+ LK Q G+DN YQM LKE TW HL RVSV EYN EKRQR+TVRAV P
Sbjct: 542 IVGCSADDLDNLKLQEGEDNPYQMTLKEATWAQHLFRVSVTPNEYNGEKRQRITVRAVVP 601
Query: 601 VDFAAESKFLLEEISK 616
VDFAAES+F+LEE+SK
Sbjct: 602 VDFAAESRFILEELSK 617
>gi|449440852|ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/608 (73%), Positives = 527/608 (86%), Gaps = 17/608 (2%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISG 68
IS +LSNPSPDS SD+P++VVQV+DLK TGNRYMF ASDG +LKAILPSNL+S+VISG
Sbjct: 9 GISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSNLTSDVISG 68
Query: 69 NIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQE 128
NIQN GLIR+LDY+LN+IP KSEKYLIVTKCEVVSPALE E+K EVK++E+G I
Sbjct: 69 NIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAGTI------ 122
Query: 129 DEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWT 188
LKPKQE+VAKSAAQI+ +Q NMAPAAR++MTRRV PLV LNPY G+WT
Sbjct: 123 -----------LKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWT 171
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
IKVRVT KGN+RTYKNA+GEGCVFNV LTDEDGTQIQATMFN+AARKFY++F LGKVYY+
Sbjct: 172 IKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYV 231
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
SRGTL+VANK+FKTVQNDYEM LN NS+V+E NE AF+P+TK+NFV ID LG +VNG +
Sbjct: 232 SRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGRD 291
Query: 309 LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDN 368
LVD+IGVVQNVS TMSIRRK NNE PKRD+T+ADETK+TV +SLWN+LAT VGQELLD
Sbjct: 292 LVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDI 351
Query: 369 ADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS 428
AD+SPI+A+K L+VGDFQG+SLST+ RS++ ++PD+ EA L+SWY+SEGK SM+S+ S
Sbjct: 352 ADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSS 411
Query: 429 GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTC 488
GL K+G+RSMYSDR+SL+HI N SLG+EKP FFSI+AY+S IKPDQ MWYRACKTC
Sbjct: 412 GLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKTC 471
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
NKKVT+A+GSGYWC+ CQKNDEECSLRYIMV RV D SGEAW+S FNEEAERI+GCSADE
Sbjct: 472 NKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADE 531
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
L++LKSQ+G++NSYQ+KLKE TWVPHL RVSV+Q EYNNEKRQR+TVR+VAPVDFAAES+
Sbjct: 532 LDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESR 591
Query: 609 FLLEEISK 616
FLLEEI+K
Sbjct: 592 FLLEEIAK 599
>gi|297806837|ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata]
gi|297317139|gb|EFH47561.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
lyrata]
Length = 604
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/622 (70%), Positives = 523/622 (84%), Gaps = 19/622 (3%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M+ +V+ D I+T+LSN S DSSS PEIVVQV+DLK GNRY FNA+DG ++KA+LP+
Sbjct: 1 MENSVTQDGIATVLSNQSLDSSSVRPEIVVQVVDLKPVGNRYTFNANDGNMKMKAMLPAT 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSE-KYLIVTKCEVVSPALEMEIKIEVKSDES 119
L+ E+ISG IQN GL+RLLDY +N+IP KSE KY+++TKCE V+ AL+ EIK E+K+
Sbjct: 61 LTCEIISGKIQNLGLVRLLDYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKA--- 117
Query: 120 GIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVS 179
GI LKPKQE VAKSA+QI+ +Q GN APAAR+AMTRRVHPLVS
Sbjct: 118 ---------------STGITLKPKQEFVAKSASQIINEQRGNAAPAARMAMTRRVHPLVS 162
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
LNPYQG+WTI+VRVT+KG MRTY NARGEGCVFNVELTDE+GTQIQATMFN AARKFYDR
Sbjct: 163 LNPYQGSWTIRVRVTNKGVMRTYNNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDR 222
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
F++GKVYYISRG+L++ANKQFKTVQNDYEM LNENSEVEEA NE F P+ KFNFVPIDE
Sbjct: 223 FEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPEIKFNFVPIDE 282
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
LG YVN +L+D+IGVVQ VSPTMSIRRK++NEM+PKRDIT+ADE+K TV VSLWN+LAT
Sbjct: 283 LGTYVNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIPKRDITLADESKNTVVVSLWNDLAT 342
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
+GQELLD AD P++AIKSLKVGDFQG+SLST+ RS V+++PD PEAKKLKSWY++EGK
Sbjct: 343 GIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTISRSNVVINPDSPEAKKLKSWYDAEGK 402
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA 479
TSM++IGSG+ S A NG+RSMYSDRV L+HITSNPSLG+EKPVFFSI+AYIS IKPDQ
Sbjct: 403 ETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSIRAYISFIKPDQT 462
Query: 480 MWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
MWYRACKTCNKKVT+A+ SGYWCEGCQK D+ECSLRYIM +V D +GE W S FN+EAE
Sbjct: 463 MWYRACKTCNKKVTEAMDSGYWCEGCQKKDQECSLRYIMAVKVSDSTGETWFSAFNDEAE 522
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
+IIGC+ADELN LKS+ G+ N +Q KLKE TW HL R+SV+QQEYN+EKRQR+TVR V+
Sbjct: 523 KIIGCTADELNNLKSEEGEVNEFQTKLKETTWSSHLFRISVSQQEYNSEKRQRITVRGVS 582
Query: 600 PVDFAAESKFLLEEISKKVSHQ 621
P+DFAAE++ LL++ISKK + Q
Sbjct: 583 PIDFAAETRLLLQDISKKKTSQ 604
>gi|15241489|ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
gi|6562316|emb|CAB62614.1| replication factor A-like protein [Arabidopsis thaliana]
gi|332003852|gb|AED91235.1| RPA70-kDa subunit B [Arabidopsis thaliana]
Length = 604
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/622 (69%), Positives = 526/622 (84%), Gaps = 19/622 (3%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M+ +V+ D I+T+L+N S DSSS PEIVVQV+DLK GNRY F+A+DGK ++KA+LP+
Sbjct: 1 MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTFSANDGKMKIKAMLPAT 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSE-KYLIVTKCEVVSPALEMEIKIEVKSDES 119
L+S++ISG IQN GLIRLL+Y +N+IP KSE KY+++TKCE V+ AL+ EIK E+K+
Sbjct: 61 LTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKA--- 117
Query: 120 GIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVS 179
GI+LKPK E VAKSA+QI+ +Q GN APAAR+AMTRRVHPLVS
Sbjct: 118 ---------------STGIMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHPLVS 162
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
LNPYQG+WTIKVRVT+KG MRTYKNARGEGCVFNVELTDE+GTQIQATMFN AARKFYDR
Sbjct: 163 LNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDR 222
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
F++GKVYYISRG+L++ANKQFKTVQNDYEM LNENSEVEEA NE F P+TKFNFVPIDE
Sbjct: 223 FEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDE 282
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
LG YVN +L+D+IGVVQ+VSPTMSIRRK++NEM+PKRDIT+ADETK+TV VSLWN+LAT
Sbjct: 283 LGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLAT 342
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
+GQELLD AD P++AIKSLKVG FQG+SLST+ RS V+++P+ PEA KLKSWY++EGK
Sbjct: 343 GIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDAEGK 402
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA 479
TSM++IGSG+ S A NG+RSMYSDRV L+HITSNPSLG+EKPVFFS +AYIS IKPDQ
Sbjct: 403 ETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPDQT 462
Query: 480 MWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
MWYRACKTCNKKVT+A+ SGYWCE CQK D+ECSLRYIM +V D +GE W+S FN+EAE
Sbjct: 463 MWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDEAE 522
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
+IIGC+AD+LN+LKS+ G+ N +Q KLKE TW HL R+SV+QQEYN+EKRQR+TVR V+
Sbjct: 523 KIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVRGVS 582
Query: 600 PVDFAAESKFLLEEISKKVSHQ 621
P+DFAAE++ LL++ISK + Q
Sbjct: 583 PIDFAAETRLLLQDISKNKTSQ 604
>gi|356564937|ref|XP_003550703.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 600
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/614 (71%), Positives = 515/614 (83%), Gaps = 20/614 (3%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLS 62
KTV+PDA+S +L+N PDSSSD+PEIVVQVLDLK TGN+YMF A+DGK +LKA++ S++
Sbjct: 4 KTVTPDAVSMLLANTCPDSSSDLPEIVVQVLDLKATGNKYMFTANDGKTKLKAMISSDMC 63
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
S+V+SG IQN GLIR+LDY +N IP KS+KYLIVTKCE VSPALE IE+KS+ESG
Sbjct: 64 SQVLSGAIQNLGLIRVLDYTVNVIPNKSDKYLIVTKCEPVSPALE----IEIKSEESG-- 117
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
GI+LK K E+V KSA QILR ++GN APAAR+AMTRRV PLVSLNP
Sbjct: 118 -------------SGILLKSKVEVVTKSANQILR-EHGNSAPAARMAMTRRVRPLVSLNP 163
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
YQGNWTIKV VTSKGNMR YKNARG+GCVFNVELTDEDGTQIQATMFN AARKFYD+F L
Sbjct: 164 YQGNWTIKVSVTSKGNMRNYKNARGDGCVFNVELTDEDGTQIQATMFNNAARKFYDKFIL 223
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
G+VYYIS+GTL+VANKQFKTVQNDYEM LNENSEVEE E +F+P+TKFNFV ID+LG
Sbjct: 224 GRVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEVAGEASFVPETKFNFVQIDQLGP 283
Query: 303 YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
+VN +ELVD+IG+V+NVS TM+IRRKS+NE +PKRDIT+AD+TK+TV VSLWNELAT G
Sbjct: 284 HVNKSELVDVIGIVKNVSSTMTIRRKSDNESIPKRDITIADDTKKTVVVSLWNELATTTG 343
Query: 363 QELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
QELLD DKSP+VAIKSLKVGDFQG+SLST+G+S VLV+P +PEAK L+SWY+ EGK +
Sbjct: 344 QELLDIVDKSPVVAIKSLKVGDFQGVSLSTIGKSVVLVNPVIPEAKNLRSWYDFEGKDAA 403
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWY 482
M S+GSG + NG RS+Y+DRV L+ ITSNPSLGD KP FFS++ +IS IKPDQAMWY
Sbjct: 404 MDSVGSGSSPTSNNGIRSVYTDRVLLSDITSNPSLGDGKPAFFSLRGHISFIKPDQAMWY 463
Query: 483 RACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
RACKTCNKKVT+++GSGY C+GCQK+DE+CSLRYIMVA+V D S E +IS FN+EAE+II
Sbjct: 464 RACKTCNKKVTESVGSGYLCDGCQKSDEQCSLRYIMVAKVSDASAETYISAFNQEAEKII 523
Query: 543 GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
GCSAD+L+ LKSQ G+ N YQM LKE TW HL RVSV EYN EKRQR+TVRAV PVD
Sbjct: 524 GCSADDLDNLKSQEGEVNPYQMTLKEATWAQHLFRVSVTPNEYNGEKRQRITVRAVVPVD 583
Query: 603 FAAESKFLLEEISK 616
FAAES+FLLE++SK
Sbjct: 584 FAAESRFLLEDLSK 597
>gi|297797049|ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata]
gi|297312244|gb|EFH42668.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata]
Length = 631
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/628 (70%), Positives = 528/628 (84%), Gaps = 13/628 (2%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M +V+PDAIST+LSNPS DSSS+ PEIVVQV+DLK GNRY F+A+DGK R+KA+
Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSERPEIVVQVVDLKPIGNRYTFSANDGKTRVKAMFTPT 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
L+ E+ISG IQN GLIRL+D+ +N+I +KS KY +V KCE V L+ +I +E KS
Sbjct: 61 LTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVNKCEAVGSVLDSDINLESKSHAEA 120
Query: 121 IIFKPKQE----------DEVKKD-GPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLA 169
PK++ ++VK D GI LKPKQE VAKSA+QI+ +Q GN APAAR+A
Sbjct: 121 S--DPKKQKLEHSPVSPVNDVKTDVCTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMA 178
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
MTRRVHPLVSLNPYQGNWTIKVRVT+KG MR YKNARGEGCVFNVELTDE+GTQIQATMF
Sbjct: 179 MTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMF 238
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
N+AARKFYDRFQLGKVYYISRG+L++ANKQFKTVQNDYEM LNENSEVEEA +E FIP+
Sbjct: 239 NDAARKFYDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPE 298
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
TKFNFVPI+ELG YVN EL+D+IGVVQ+VSPTMSIRR+++NEM+PKRDIT+ADE+K+TV
Sbjct: 299 TKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTV 358
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
VSLWN+LAT +GQELLD ADKSP+VAIKSLKVGDFQG+SLST+ RS V+++P+ PEAKK
Sbjct: 359 VVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKK 418
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
LKSW++SEGK SM+SIGSG+ +KNG+RSMY+DRV L+HITSNPSLG+EKPVFFS +A
Sbjct: 419 LKSWFDSEGKEISMSSIGSGMSPSSKNGSRSMYTDRVLLSHITSNPSLGEEKPVFFSTRA 478
Query: 470 YISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
YIS IKPDQ MWY+ACKTCNKKVT+AL SGYWCEGCQK EECSLRYIM +V D SGE
Sbjct: 479 YISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVTDSSGET 538
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
WIS FN+EAE+I+GCSAD+LN+L+S+ G+ N YQ KLKE TW H+ RVSV+Q EYN EK
Sbjct: 539 WISSFNDEAEKILGCSADDLNKLRSEGGEVNEYQTKLKEATWSSHVFRVSVSQNEYNGEK 598
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISKK 617
RQRVTV+ VAP+DFAAE++ LL++IS K
Sbjct: 599 RQRVTVKGVAPLDFAAETRLLLQDISNK 626
>gi|449525283|ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/573 (73%), Positives = 496/573 (86%), Gaps = 17/573 (2%)
Query: 44 FNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVS 103
F ASDG +LKAILPSNL+S+VISGNIQN GLIR+LDY+LN+IP KSEKYLIVTKCEVVS
Sbjct: 1 FTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVS 60
Query: 104 PALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMA 163
PALE E+K EVK++E+G I LKPKQE+VAKSAAQI+ +Q NMA
Sbjct: 61 PALEKEVKTEVKTEEAGTI-----------------LKPKQELVAKSAAQIVHEQRMNMA 103
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
PAAR++MTRRV PLV LNPY G+WTIKVRVT KGN+RTYKNA+GEGCVFNV LTDEDGTQ
Sbjct: 104 PAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQ 163
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
IQATMFN+AARKFY++F LGKVYY+SRGTL+VANK+FKTVQNDYEM LN NS+V+E NE
Sbjct: 164 IQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNE 223
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
AF+P+TK+NFV ID LG +VNG +LVD+IGVVQNVS TMSIRRK NNE PKRD+T+AD
Sbjct: 224 AAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIAD 283
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
ETK+TV +SLWN+LAT VGQELLD AD+SPI+A+K L+VGDFQG+SLST+ RS++ ++PD
Sbjct: 284 ETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPD 343
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPV 463
+ EA L+SWY+SEGK SM+S+ SGL K+G+RSMYSDR+SL+HI N SLG+EKP
Sbjct: 344 IKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPT 403
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
FFSI+AY+S IKPDQ MWYRACKTCNKKVT+A+GSGYWC+ CQKNDEECSLRYIMV RV
Sbjct: 404 FFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVS 463
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D SGEAW+S FNEEAERI+GCSADEL++LKSQ+G++NSYQ+KLKE TWVPHL RVSV+Q
Sbjct: 464 DASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQN 523
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
EYNNEKRQR+TVR+VAPVDFAAES+FLLEEI+K
Sbjct: 524 EYNNEKRQRITVRSVAPVDFAAESRFLLEEIAK 556
>gi|15239494|ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
gi|10177323|dbj|BAB10649.1| replication protein A1 [Arabidopsis thaliana]
gi|28393124|gb|AAO41995.1| putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
Length = 629
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/624 (70%), Positives = 525/624 (84%), Gaps = 7/624 (1%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSN 60
M +V+PDAIST+LSNPS DSSSD EIVVQV+DLK GNRY F+A+DGK ++KA+ ++
Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTFSANDGKTKVKAMFTAS 60
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
L+ E+ISG IQN GLIRL+D+ +N+I +KS KY +VTKCE V L+ EI ++ KS E
Sbjct: 61 LTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLDSKSGEEE 120
Query: 121 IIFKPKQEDEVKKDGP-------GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR 173
KQ+ E P GI LKPKQE VAKSA+QI+ +Q GN APAAR+AMTRR
Sbjct: 121 AREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMAMTRR 180
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
VHPLVSLNPYQGNWTIKVRVT+KG MR YKNARGEGCVFNVELTDE+GTQIQATMFN+AA
Sbjct: 181 VHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAA 240
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
RKF+DRFQLGKVYYISRG+L++ANKQFKTVQNDYEM LNENSEVEEA +E FIP+TKFN
Sbjct: 241 RKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFN 300
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FVPI+ELG YVN EL+D+IGVVQ+VSPTMSIRR+++NEM+PKRDIT+ADE+++TV VSL
Sbjct: 301 FVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSL 360
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
WN+LAT +GQELLD AD+SP++AIKSLKVGDFQG+SLST+ RS V+++P+ PEAKKLKSW
Sbjct: 361 WNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSW 420
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
++SEGK SM+SIGSG+ AKNG+RS+Y+DRV L+HITSNPSL +EKPVFFS +AYIS
Sbjct: 421 FDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISF 480
Query: 474 IKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
IKPDQ MWY+ACKTCNKKVT+AL SGYWCEGCQ+ EECSLRYIM +V D SGE WIS
Sbjct: 481 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 540
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
FN+EAE+I+GCSADELN+LKS+ G+ N YQ KLKE TW H+ RVSV Q EYN EKRQRV
Sbjct: 541 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 600
Query: 594 TVRAVAPVDFAAESKFLLEEISKK 617
TV+ VAP+DFAAE++ LL++IS K
Sbjct: 601 TVKGVAPLDFAAETRLLLQDISNK 624
>gi|242041767|ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/618 (67%), Positives = 511/618 (82%), Gaps = 9/618 (1%)
Query: 4 TVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL--TGNRYMFNASDGKKRLKAILPSNL 61
+V+P A+S IL++PS S +P++VVQVLDLK TG+R+ F A+DGK ++KA+ P++
Sbjct: 6 SVTPGAVSHILAHPSTGSDGAVPDLVVQVLDLKSIGTGSRFSFMATDGKDKIKAMFPTSF 65
Query: 62 SSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI 121
+SEV SGN++N GLIR+LDY N + + K LIV KCE+V AL+ EI E K +E I
Sbjct: 66 ASEVRSGNLKNLGLIRILDYTCNAVNGNNGKVLIVIKCELVCQALDAEINGEAKKEEPPI 125
Query: 122 IFKPKQEDEV---KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLV 178
+ KPK E V + + P + +KPKQE+ KSA+QI+ +Q GN APAARL+MTRRVHPL+
Sbjct: 126 VLKPKDEGVVVAEQANAPPVAIKPKQEL--KSASQIVNEQRGNAAPAARLSMTRRVHPLI 183
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+LNPYQGNW IKVRVTSKGN+RTY+NARGEGCVFNVELTDEDGTQIQATMFNEAA+KFY
Sbjct: 184 TLNPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFYP 243
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
F+LGKVYY+S+G+LR+ANKQFKTVQNDYEM+LNEN+ VEEA ET FIPQ ++NFV ID
Sbjct: 244 IFELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEEAEGET-FIPQVQYNFVKID 302
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
LG YV G ELVDIIGVVQ+VSPT+S+RRK +NE +PKRDI VAD++ +TV++SLWN+LA
Sbjct: 303 HLGTYVGGRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLA 362
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
T GQELLD D SP+VAIKSLKV DFQG+SLST+GRST+ ++PDLPEA+ +KSWY+SEG
Sbjct: 363 TTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLAINPDLPEAQNVKSWYDSEG 422
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQ 478
K TS+A IG+ +G+ G +SMYSDRV L+HITS+P++G EKPVFFS+ A IS IKPDQ
Sbjct: 423 KDTSLAPIGAEMGAARAGGLKSMYSDRVFLSHITSDPAMGQEKPVFFSLNAIISHIKPDQ 482
Query: 479 AMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
MWYRACKTCNKKVT+A GSGYWCEGCQKND ECSLRYIMV ++ D +GEAW+S+FNE A
Sbjct: 483 NMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVFNEHA 542
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
E+IIGCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV Q EY NEKRQR+TVR+
Sbjct: 543 EKIIGCSADELDRIRKEEGDD-SYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSE 601
Query: 599 APVDFAAESKFLLEEISK 616
APVD+AAESK+LLEEI+K
Sbjct: 602 APVDYAAESKYLLEEIAK 619
>gi|357120348|ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/635 (65%), Positives = 519/635 (81%), Gaps = 22/635 (3%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLK---LTGNRYMFNASDGKKRLKAILPS 59
K+V+PDA++ IL+N SP+S D+PEIVVQV+DLK TG R+ F ASDGK ++KA+LP+
Sbjct: 4 KSVTPDALAIILANRSPESPEDVPEIVVQVVDLKPLGSTGTRFTFMASDGKAKMKAMLPT 63
Query: 60 NLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDES 119
N +SEV SGN+QN GL+R+L Y N+IP K LI+TKCEVV+ AL+ EI EVKS+E
Sbjct: 64 NFASEVNSGNLQNLGLVRILHYTCNDIPKTLSKCLIITKCEVVAQALDAEINSEVKSEEE 123
Query: 120 GIIF-KPKQEDEV--------------KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAP 164
++ KPK+E V GP ++ +Q + KSA+QI+ ++ GN AP
Sbjct: 124 PVVLAKPKEEPVVLTKRTEEAEIMPSQTGGGPSATVQKRQHV--KSASQIISEERGNAAP 181
Query: 165 AARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
AARLA+TRRVHPL+SLNPYQGNW IKVRVTSKGN+RTY+NARGEG VFNVELTDEDGTQI
Sbjct: 182 AARLAITRRVHPLISLNPYQGNWVIKVRVTSKGNLRTYRNARGEGHVFNVELTDEDGTQI 241
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
QATMFNEAA+KFY F+LGKVYYIS+G+LRVANKQFKTVQNDYEM LNEN+ VEEA E+
Sbjct: 242 QATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVQNDYEMTLNENAVVEEAEGES 301
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
FIP ++NFV ID LG YV G ELVDIIGVVQ+VSPT+SIRRK +NE +PKRDI VAD+
Sbjct: 302 -FIPPVQYNFVKIDHLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNETIPKRDIVVADD 360
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+ +TVTV+LWN+LAT +G++LLD D +P++A+KSLKV DFQG+S+ST+G+ST++++P+L
Sbjct: 361 SNKTVTVTLWNDLATTIGEQLLDMVDSAPVIAVKSLKVSDFQGVSVSTVGKSTLVINPEL 420
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
PEA KL++WYESEGKGTSMAS+G+ +G+ G+RSMYSDRV L+HITS+P+LG +KPVF
Sbjct: 421 PEADKLRTWYESEGKGTSMASVGADMGASRTGGSRSMYSDRVFLSHITSDPNLGQDKPVF 480
Query: 465 FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
FS+ AYIS IKPDQ MWYRACKTCNKKVT+A+GSGYWCEGCQKN EEC LRYIM +V D
Sbjct: 481 FSLNAYISHIKPDQTMWYRACKTCNKKVTEAVGSGYWCEGCQKNYEECMLRYIMAIKVSD 540
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+GEAW+S+FN++AERI+GCSADEL+ + + GDD S+ ++LKE TWVPHL RVSV+Q E
Sbjct: 541 PTGEAWLSLFNDQAERIVGCSADELDRSRKEEGDD-SFLLRLKEATWVPHLFRVSVSQNE 599
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
Y EKRQR+TVR+ +PVD+AAE++FLLEEI+K S
Sbjct: 600 YMGEKRQRITVRSESPVDYAAEARFLLEEIAKLTS 634
>gi|2258469|gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/636 (66%), Positives = 511/636 (80%), Gaps = 40/636 (6%)
Query: 4 TVSPDAISTILSNPSPDSSSDIP--EIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNL 61
+V+P A++ +L N SPD+++ +P EIV+QV+DLK G R+ F ASDGK ++K +L + L
Sbjct: 8 SVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIGTRFTFLASDGKDKIKTMLLTQL 67
Query: 62 SSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI 121
+ EV SGNIQN G+IR+LDY N I K EK LI+TK EVV AL+ EIK E +
Sbjct: 68 APEVRSGNIQNLGVIRVLDYTCNTIGEKQEKVLIITKLEVVFKALDSEIKCEAE------ 121
Query: 122 IFKPKQEDEVKKDGPGIVLKPKQEMVA---------------------KSAAQILRDQNG 160
KQE++ P I+L PK+E V KSA+QI+ +Q G
Sbjct: 122 ----KQEEK-----PAILLSPKEESVVLSKPTNAPPLPPVVLKPKQEVKSASQIVNEQRG 172
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N APAARLAMTRRVHPL+SLNPYQGNW IKVRVTSKGN+RTYKNARGEGCVFNVELTD D
Sbjct: 173 NAAPAARLAMTRRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVD 232
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
GTQIQATMFNEAA+KFY F+LGKVYYIS+G+LRVANKQFKTV NDYEM LNEN+ VEEA
Sbjct: 233 GTQIQATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEA 292
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
ET FIPQ ++NFV ID+LG YV G ELVD+IGVVQ+VSPT+S+RRK +NE +PKRDI
Sbjct: 293 EGET-FIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIV 351
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
VAD++ +TVT+SLWN+LAT GQELLD D +PI+AIKSLKV DFQG+SLST+GRST++V
Sbjct: 352 VADDSSKTVTISLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVV 411
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
+PDLPEA++L++WY+SEGKGTSMASIGS +G+ GARSMYSDRV L+HITS+P+LG +
Sbjct: 412 NPDLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQD 471
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
KPVFFS+ AYISLIKPDQ MWYRACKTCNKKVT+A+GSGYWCEGCQKND ECSLRYIMV
Sbjct: 472 KPVFFSLNAYISLIKPDQTMWYRACKTCNKKVTEAMGSGYWCEGCQKNDAECSLRYIMVI 531
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
+V D +GEAW+S+FN++AERI+GCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV
Sbjct: 532 KVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDD-SYLLKLKEATWVPHLFRVSV 590
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
Q EY NEKRQR+TVR+ APVD AAE+K++LEEI+K
Sbjct: 591 TQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAK 626
>gi|115451537|ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|108706832|gb|ABF94627.1| replication factor-a protein 1 containing protein, expressed [Oryza
sativa Japonica Group]
gi|113547840|dbj|BAF11283.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|125585388|gb|EAZ26052.1| hypothetical protein OsJ_09906 [Oryza sativa Japonica Group]
Length = 630
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/636 (66%), Positives = 511/636 (80%), Gaps = 40/636 (6%)
Query: 4 TVSPDAISTILSNPSPDSSSDIP--EIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNL 61
+V+P A++ +L N SPD+++ +P EIV+QV+DLK G R+ F ASDGK ++K +L + L
Sbjct: 8 SVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIGTRFTFLASDGKDKIKTMLLTQL 67
Query: 62 SSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI 121
+ EV SGNIQN G+IR+LDY N I K EK LI+TK EVV AL+ EIK E +
Sbjct: 68 APEVRSGNIQNLGVIRVLDYTCNTIGEKQEKVLIITKLEVVFKALDSEIKCEAE------ 121
Query: 122 IFKPKQEDEVKKDGPGIVLKPKQEMVA---------------------KSAAQILRDQNG 160
KQE++ P I+L PK+E V KSA+QI+ +Q G
Sbjct: 122 ----KQEEK-----PAILLSPKEESVVLSKPTNAPPLPPVVLKPKQEVKSASQIVNEQRG 172
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N APAARLAMTRRVHPL+SLNPYQGNW IKVRVTSKGN+RTYKNARGEGCVFNVELTD D
Sbjct: 173 NAAPAARLAMTRRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVD 232
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
GTQIQATMFNEAA+KFY F+LGKVYYIS+G+LRVANKQFKTV NDYEM LNEN+ VEEA
Sbjct: 233 GTQIQATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEA 292
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
ET FIPQ ++NFV ID+LG YV G ELVD+IGVVQ+VSPT+S+RRK +NE +PKRDI
Sbjct: 293 EGET-FIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIV 351
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
VAD++ +TVT+SLWN+LAT GQELLD D +PI+AIKSLKV DFQG+SLST+GRST++V
Sbjct: 352 VADDSSKTVTISLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVV 411
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
+PDLPEA++L++WY+SEGKGTSMASIGS +G+ GARSMYSDRV L+HITS+P+LG +
Sbjct: 412 NPDLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQD 471
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
KPVFFS+ AYISLIKPDQ MWYRACKTCNKKVT+A+GSGYWCEGCQKND ECSLRYIMV
Sbjct: 472 KPVFFSLNAYISLIKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVI 531
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
+V D +GEAW+S+FN++AERI+GCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV
Sbjct: 532 KVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDD-SYLLKLKEATWVPHLFRVSV 590
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
Q EY NEKRQR+TVR+ APVD AAE+K++LEEI+K
Sbjct: 591 TQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAK 626
>gi|31580977|dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
Length = 630
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/636 (66%), Positives = 511/636 (80%), Gaps = 40/636 (6%)
Query: 4 TVSPDAISTILSNPSPDSSSDIP--EIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNL 61
+V+P A++ +L N SPD+++ +P EIV+QV+DLK G R+ F ASDGK ++K +L + L
Sbjct: 8 SVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIGTRFTFLASDGKDKIKTMLLTQL 67
Query: 62 SSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI 121
+ EV SGNIQN G+IR+LDY N I K EK LI+TK EVV AL+ EIK E +
Sbjct: 68 APEVRSGNIQNLGVIRVLDYTCNTIGEKQEKVLIITKLEVVFKALDSEIKCEAE------ 121
Query: 122 IFKPKQEDEVKKDGPGIVLKPKQEMVA---------------------KSAAQILRDQNG 160
KQE++ P I+L PK+E V KSA+QI+ +Q G
Sbjct: 122 ----KQEEK-----PAILLSPKEESVVLSKPTNAPPLPPVVLKPKQEVKSASQIVNEQRG 172
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N APAARLAMTRRVHPL+SLNPYQGNW IKVRVTSKGN+RTYKNARGEGCVFNVELTD D
Sbjct: 173 NAAPAARLAMTRRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVD 232
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
GTQIQATMFNEAA+KFY F+LGKVYYIS+G+LRVA+KQFKTV NDYEM LNEN+ VEEA
Sbjct: 233 GTQIQATMFNEAAKKFYPMFELGKVYYISKGSLRVADKQFKTVHNDYEMTLNENAVVEEA 292
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
ET FIPQ ++NFV ID+LG YV G ELVD+IGVVQ+VSPT+S+RRK +NE +PKRDI
Sbjct: 293 EGET-FIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIV 351
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
VAD++ +TVT+SLWN+LAT GQELLD D +PI+AIKSLKV DFQG+SLST+GRST+++
Sbjct: 352 VADDSSKTVTISLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVL 411
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
+PDLPEA++L++WY+SEGKGTSMASIGS +G+ GARSMYSDRV L+HITS+P+LG +
Sbjct: 412 NPDLPEAEQLRAWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQD 471
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
KPVFFS+ AYISLIKPDQ MWYRACKTCNKKVT+A+GSGYWCEGCQKND ECSLRYIMV
Sbjct: 472 KPVFFSLNAYISLIKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVI 531
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
+V D +GEAW+S+FN++AERI+GCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV
Sbjct: 532 KVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKEEGDD-SYLLKLKEATWVPHLFRVSV 590
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
Q EY NEKRQR+TVR+ APVD AAE+K++LEEI+K
Sbjct: 591 TQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIAK 626
>gi|226531756|ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
gi|194704722|gb|ACF86445.1| unknown [Zea mays]
gi|195647462|gb|ACG43199.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
gi|413956552|gb|AFW89201.1| Replication protein A DNA-binding subunit [Zea mays]
Length = 623
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/619 (65%), Positives = 504/619 (81%), Gaps = 9/619 (1%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG--NRYMFNASDGKKRLKAILPSN 60
K+V+P A+S IL++PS S + ++VVQVLDLK G +R+ F A+DG ++KA+LP+
Sbjct: 5 KSVTPGAVSYILAHPSTGSDGAVSDLVVQVLDLKSIGMGSRFSFTATDGNDKIKAMLPTY 64
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
+SEV SGN++N GLIR+LDY N + ++K LIV KCE V AL+ EI E K ++
Sbjct: 65 FASEVHSGNLKNFGLIRILDYTCNSVKGNADKVLIVVKCETVCEALDAEINGEAKKEDPP 124
Query: 121 IIFKPKQEDEV---KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPL 177
I+ KPK E V + + P +V+KPKQE+ KSA+QI+ +Q GN APA RL+MTRRVHPL
Sbjct: 125 IVLKPKDEGSVVAEETNSPPLVMKPKQEV--KSASQIVTEQRGNAAPATRLSMTRRVHPL 182
Query: 178 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
++LNPYQGNW IKVRVTSKGN+RTY+NARGEGCVFNVELTDEDGTQIQATMFNEAA+KFY
Sbjct: 183 ITLNPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFY 242
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
F+LGKVYY+S+G+LR+ANKQFKTV+NDYE++LNEN+ VEEA ET F+P ++N V I
Sbjct: 243 PIFELGKVYYVSKGSLRIANKQFKTVKNDYELSLNENAIVEEAEGET-FLPPVQYNLVKI 301
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
D+LG YV G ELVDI+GVVQ+VSPT+S+RRK +NE +PKRDI VAD++ +TVT+SLWN+L
Sbjct: 302 DQLGPYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTISLWNDL 361
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
AT GQELLD D SP+VAIKSLKV DFQG+SLST+GRST+ ++PDLPEAK LKSWY+SE
Sbjct: 362 ATTTGQELLDMVDSSPVVAIKSLKVSDFQGVSLSTIGRSTLEINPDLPEAKNLKSWYDSE 421
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
GK TS+A I + +G+ G +SMYSDRV L+HITS+P++G EKPVFFS+ A IS IKPD
Sbjct: 422 GKDTSLAPISAEVGATRAGGFKSMYSDRVFLSHITSDPAMGQEKPVFFSLYAIISHIKPD 481
Query: 478 QAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE 537
Q MWYRAC TCNKKVT+A GSGYWCEGCQKN ECSLRYIMV ++ D +GEAW+S+FNE
Sbjct: 482 QNMWYRACTTCNKKVTEAFGSGYWCEGCQKNYSECSLRYIMVIKLSDPTGEAWVSVFNEH 541
Query: 538 AERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRA 597
AE+IIGCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV Q EY NEKRQR+TVR
Sbjct: 542 AEKIIGCSADELDRIRKEEGDD-SYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRG 600
Query: 598 VAPVDFAAESKFLLEEISK 616
APVDFAAESK+LLEEI+K
Sbjct: 601 EAPVDFAAESKYLLEEIAK 619
>gi|195649695|gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/616 (65%), Positives = 502/616 (81%), Gaps = 8/616 (1%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL--TGNRYMFNASDGKKRLKAILPSN 60
K V+P A+S IL++PS S + ++VVQVLDLK TG+R+ F A+DGK ++KA+LP+N
Sbjct: 5 KLVTPIAVSHILAHPSAGSDGAVTDLVVQVLDLKSVGTGSRFSFTATDGKDKIKAMLPTN 64
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
SEV SGN++N GLIR++DY N + K +K L+V KCE+V AL+ EI E K +E
Sbjct: 65 FGSEVRSGNLKNLGLIRIIDYTCNVVKGKDDKVLVVIKCELVCQALDAEINGEAKKEEPP 124
Query: 121 IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
I+ KPK DE P + +KPKQE+ KSA+QI+ +Q GN AP L+MT+RVHPL++L
Sbjct: 125 IVLKPK--DECVGVTPPLAMKPKQEV--KSASQIVNEQRGNTAPVKPLSMTKRVHPLITL 180
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQGNW IKVRVTSKGN+RTY+NARGEGCVFNVELTDEDGTQIQATMFN+AA+KFY F
Sbjct: 181 NPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNDAAKKFYPIF 240
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+LG VYY+S+G+LR+ANKQFKTVQNDYEM+LNEN+ VEEA ET IPQ ++N V ID+L
Sbjct: 241 ELGNVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEEAEGETC-IPQVQYNLVKIDQL 299
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YV G ELVDI+GVVQ+VSPT+S+RRK +NE +PKRDI VAD++ +TV++SLWN+LAT
Sbjct: 300 GSYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLATT 359
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
GQELLD AD SP+VAIKSLKV DFQG+SLST+G+ST+ ++PDL EA+ LKSWY+SEGK
Sbjct: 360 TGQELLDMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSEGKD 419
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
TS+A IG+ +G+ G +S YSDRV L+HITS+P++G EKPVFFS+ A IS IKPDQ M
Sbjct: 420 TSLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMGQEKPVFFSLYATISHIKPDQNM 479
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVT+ GSGYWCEGCQKND ECSLRYIMV +V D +GEAW+S+FNE AE+
Sbjct: 480 WYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEK 539
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
IIGCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV Q EYNNEKRQR+TVR+ AP
Sbjct: 540 IIGCSADELDRIRKEEGDD-SYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAP 598
Query: 601 VDFAAESKFLLEEISK 616
V+ AAESK+LLE+I+K
Sbjct: 599 VEHAAESKYLLEQIAK 614
>gi|223942895|gb|ACN25531.1| unknown [Zea mays]
gi|414865518|tpg|DAA44075.1| TPA: replication protein A DNA-binding subunit [Zea mays]
Length = 617
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/616 (65%), Positives = 502/616 (81%), Gaps = 8/616 (1%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL--TGNRYMFNASDGKKRLKAILPSN 60
K V+P A+S IL++PS S + ++VVQVLDLK TG+R+ F A+DGK ++KA+LP+N
Sbjct: 5 KLVTPVAVSHILAHPSAGSDGAVTDLVVQVLDLKSVGTGSRFSFTATDGKDKIKAMLPTN 64
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
SEV SGN++N GLIR++DY N + K +K L+V KCE+V AL+ EI E K +E
Sbjct: 65 FGSEVRSGNLKNLGLIRIIDYTCNVVKGKDDKVLVVIKCELVCQALDAEINGEAKKEEPP 124
Query: 121 IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
I+ KPK DE P + +KPKQE+ KSA+QI+ +Q GN AP L+MT+RVHPL++L
Sbjct: 125 IVLKPK--DECVGVTPPLAMKPKQEV--KSASQIVNEQRGNTAPVKPLSMTKRVHPLITL 180
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQGNW IKVRVTSKGN+RTY+NARGEGCVFNVELTDEDGTQIQATMFN+AA+KFY F
Sbjct: 181 NPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNDAAKKFYPIF 240
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+LGKVYY+S+G+LR+ANKQFKTVQNDYEM+LNEN+ VEEA ET IPQ ++N V ID+L
Sbjct: 241 ELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEEAEGETC-IPQVQYNLVKIDQL 299
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YV G ELVDI+GVVQ+VSPT+S+RRK +NE +PKRDI VAD++ +TV++SLWN+LAT
Sbjct: 300 GSYVGGRELVDIVGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLATT 359
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
GQELL+ AD SP+VAIKSLKV DFQG+SLST+G+ST+ ++PDL EA+ LKSWY+SEGK
Sbjct: 360 TGQELLNMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSEGKD 419
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
TS+A IG+ +G+ G +S YSDRV L+HITS+P++G EKPVFFS+ A IS IKPDQ M
Sbjct: 420 TSLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMGQEKPVFFSLYATISHIKPDQNM 479
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVT+ GSGYWCEGCQKND ECSLRYIMV +V D +GEAW S+FNE AE+
Sbjct: 480 WYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVIKVSDPTGEAWFSVFNEHAEK 539
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
IIGCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV Q EYNNEKRQR+TVR+ AP
Sbjct: 540 IIGCSADELDRIRKEEGDD-SYVLKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAP 598
Query: 601 VDFAAESKFLLEEISK 616
V+ AAESK+LLE+I+K
Sbjct: 599 VEHAAESKYLLEQIAK 614
>gi|226503005|ref|NP_001147118.1| replication protein A1 [Zea mays]
gi|195607412|gb|ACG25536.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/616 (65%), Positives = 501/616 (81%), Gaps = 8/616 (1%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL--TGNRYMFNASDGKKRLKAILPSN 60
K V+P A+S IL++PS S + ++VVQVLDLK TG+R+ F A+DGK ++KA+LP+N
Sbjct: 5 KLVTPVAVSHILAHPSAGSDGAVTDLVVQVLDLKSVGTGSRFSFTATDGKDKIKAMLPTN 64
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESG 120
SEV SGN++N GLIR++DY N + K +K L+V KCE+V AL+ EI E K +E
Sbjct: 65 FGSEVRSGNLKNLGLIRIIDYTCNVVKGKDDKVLVVIKCELVCQALDAEINGEAKKEEPP 124
Query: 121 IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
I+ KPK DE + +KPKQE+ KSA+QI+ +Q GN AP L+MT+RVHPL++L
Sbjct: 125 IVLKPK--DEWMGVTSPLAMKPKQEV--KSASQIVNEQRGNTAPVKPLSMTKRVHPLITL 180
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQGNW IKVRVTSKGN+RTY+NARGEGCVFNVELTDEDGTQIQATMFN+AA+KFY F
Sbjct: 181 NPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNDAAKKFYPIF 240
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+LGKVYY+S+G+LR+ANKQFKTVQNDYEM+LNEN+ VEEA ET IPQ ++N V ID+L
Sbjct: 241 ELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEEAEGETC-IPQVQYNLVKIDQL 299
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YV G ELVDIIGVVQ+VSPT+S+RRK +NE +PKRDI VAD++ +TV++SLWN+L T
Sbjct: 300 GSYVGGRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLTTT 359
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
GQELLD AD SP+VAIKSLKV DFQG+SLST+G+ST+ ++PDL EA+ LKSWY+SEGK
Sbjct: 360 TGQELLDMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSEGKD 419
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
TS+A IG+ +G+ G +S YSDRV L+HITS+P++G EKPVFFS+ A IS IKPDQ M
Sbjct: 420 TSLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMGQEKPVFFSLYATISHIKPDQNM 479
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVT+ GSGYWCEGCQKND ECSLRYIMV +V D +GEAW+S+FNE AE+
Sbjct: 480 WYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVIKVSDPTGEAWVSVFNEHAEK 539
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
IIGCSADEL+ ++ + GDD SY +KLKE TWVPHL RVSV Q EYNNEKRQR+TVR+ AP
Sbjct: 540 IIGCSADELDRIRKEEGDD-SYVLKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAP 598
Query: 601 VDFAAESKFLLEEISK 616
V+ AAESK+LLE+I+K
Sbjct: 599 VEHAAESKYLLEQIAK 614
>gi|359475570|ref|XP_003631705.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 389
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/382 (71%), Positives = 320/382 (83%), Gaps = 1/382 (0%)
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
QLGKVYYI +G L+VANKQFKTVQNDY M LNENSEVEEA NE FIP+ KF F+ I+EL
Sbjct: 8 QLGKVYYIXKGALKVANKQFKTVQNDYGMTLNENSEVEEASNEETFIPEAKFKFLXIEEL 67
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YVNG ELVD+ GVVQ+VSPTM+IRRKS NE+VPKRDIT+AD++K++V VSLWN+ ATN
Sbjct: 68 GPYVNGKELVDVSGVVQSVSPTMTIRRKSTNEIVPKRDITIADKSKKSVVVSLWNDHATN 127
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES-EGK 419
VG ELLDNADK PI+AIKSLKVGDFQG+SLSTL +S LV+PD PE+KKL+SWY GK
Sbjct: 128 VGXELLDNADKFPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHDYHGK 187
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA 479
SMA IGS + +K G RSMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKP+Q
Sbjct: 188 VASMACIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPEQT 247
Query: 480 MWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
MWY+ACKTCNKKVTDA+ SGYWCEGC+KND+ECS RYIMV +V D SGEA +++FNE+AE
Sbjct: 248 MWYQACKTCNKKVTDAIESGYWCEGCEKNDDECSXRYIMVVKVSDDSGEACLALFNEQAE 307
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
RI GCSADEL++LKSQ G++N +Q KLKE WVPHL R+SVAQ EY NEKRQ +T RAV
Sbjct: 308 RIFGCSADELDKLKSQEGEENRFQQKLKEAIWVPHLFRISVAQHEYMNEKRQWITARAVV 367
Query: 600 PVDFAAESKFLLEEISKKVSHQ 621
VDFAAES+ LLEEISK + Q
Sbjct: 368 AVDFAAESRLLLEEISKMKTSQ 389
>gi|302799733|ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
gi|300150791|gb|EFJ17440.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
Length = 566
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/579 (50%), Positives = 400/579 (69%), Gaps = 31/579 (5%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG + KA+LP+++S+EV +G IQ+ GLIR+L + + IP K LIVT CEVVS AL
Sbjct: 3 SDGSMKAKAMLPTHMSAEVEAGKIQHLGLIRVLSHTTSVIPNLPNKALIVTDCEVVSGAL 62
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAA 166
+ E+ E S + Q DE P + P KSAAQI+++++G APAA
Sbjct: 63 DREVGSESSSSA-----QKTQCDE----KPKFLSAP-----VKSAAQIVQEEHGRAAPAA 108
Query: 167 RLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
R+ ++RRV+PLVSL PYQG+WTIKVRVTSKG +RTY+NARGEG VFNVELTDEDGTQIQA
Sbjct: 109 RMGVSRRVYPLVSLTPYQGSWTIKVRVTSKGPLRTYRNARGEGSVFNVELTDEDGTQIQA 168
Query: 227 TMFNEAARKFYDRFQLGK-------VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
TMF EAA KFY F+LGK VYY+S G LR+AN+QF V+NDYEM LN +S VEE
Sbjct: 169 TMFKEAAEKFYPMFELGKATSFLYQVYYVSNGNLRMANRQFSAVKNDYEMTLNASSGVEE 228
Query: 280 AV---NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+ IP K+NFV I++L YVN EL D IG+VQ+VS TMS+RRK +N K
Sbjct: 229 VTEPDGKPGVIPLVKYNFVKIEDLAAYVNKRELFDAIGIVQSVSSTMSVRRKVDNTEFAK 288
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGR 395
R+I + D++++TV VSLW+ LA G +LL+ +P+V I+S++ DFQ G+SLST
Sbjct: 289 REIVLVDQSQKTVAVSLWSSLAVEDGAKLLEMLPDAPVVVIRSVRANDFQAGVSLSTSPN 348
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
S V ++PD+PEA++L+SWY+ GK ++ S+G+GL A S +R ++ IT+ P
Sbjct: 349 SMVWINPDIPEARELRSWYDESGKDATLTSVGAGLSQRAG----SANDNRADISDITA-P 403
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
S+G+ K +F+++A IS IKPDQ MWY AC TCN+KV++ S +WCE CQ++ + S R
Sbjct: 404 SVGEGKAAYFTVRACISYIKPDQTMWYTACSTCNRKVSED-SSRFWCEACQRHFDTASRR 462
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
YIM+A++ D SG+AW+S FN++AE+I+G SADEL +KSQ D Y +L +V W ++
Sbjct: 463 YIMLAKLTDHSGDAWVSFFNDQAEQILGVSADELATIKSQDDDQRQYSSQLSKVVWSSYV 522
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
RVSVAQ EY EKRQR+T+RAV D+A+ES+ LL ++
Sbjct: 523 FRVSVAQTEYLGEKRQRITIRAVNDTDWASESRLLLAKM 561
>gi|302759481|ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
gi|300168431|gb|EFJ35034.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
Length = 566
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 294/579 (50%), Positives = 400/579 (69%), Gaps = 31/579 (5%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG + KA+LP+++S+EV +G IQ+ GLIR+L +A + IP K LIVT CEVVS AL
Sbjct: 3 SDGSMKAKAMLPTHMSAEVEAGKIQHLGLIRVLSHATSVIPNLPNKALIVTDCEVVSGAL 62
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAA 166
+ E+ E S + Q DE P + P KSAAQI+++++G APAA
Sbjct: 63 DREVGSESSSSA-----QKTQCDE----KPKFLSAP-----VKSAAQIVQEEHGRAAPAA 108
Query: 167 RLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
R+ ++RRV+PLVSL PYQG+WTIKVRVTSKG +RTY+NARGEG VFNVELTDEDGTQIQA
Sbjct: 109 RMGVSRRVYPLVSLTPYQGSWTIKVRVTSKGPLRTYRNARGEGSVFNVELTDEDGTQIQA 168
Query: 227 TMFNEAARKFYDRFQLGK-------VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
TMF EAA KFY F+LGK VYY+S G LR+AN++F V+NDYEM LN +S VEE
Sbjct: 169 TMFKEAAEKFYPMFELGKATSFLYQVYYVSNGNLRMANRRFSAVKNDYEMTLNASSGVEE 228
Query: 280 AV---NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+ IP K+NFV I++L YVN EL D IG+VQ+VS TMS+RRK +N K
Sbjct: 229 VTEPDGKPGVIPLVKYNFVKIEDLAAYVNKRELFDAIGIVQSVSSTMSVRRKVDNTEFAK 288
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGR 395
R+I + D++++TV VSLW+ LA G +LL+ +P+V I+S++ DFQ G+SLST
Sbjct: 289 REIVLVDQSQKTVAVSLWSSLAVEDGAKLLEMLPDAPVVVIRSVRANDFQAGVSLSTSPN 348
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
S V ++PD+PEA++L+SWY+ GK ++ S+G+GL A +R ++ IT+ P
Sbjct: 349 SMVWINPDIPEARELRSWYDESGKDATLTSVGAGLSQRAG----PTNDNRADISDITA-P 403
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
S+G+ K +F+++A IS IKPDQ MWY AC TCN+KV++ S +WCE CQ++ + S R
Sbjct: 404 SVGEGKAAYFTVRACISYIKPDQTMWYTACSTCNRKVSED-SSRFWCEACQRHFDTASRR 462
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
YIM+A++ D SG+AW+S FN++AE+I+G SADEL +KSQ D Y +L +V W ++
Sbjct: 463 YIMLAKLTDHSGDAWVSFFNDQAEQILGVSADELATIKSQDDDQRQYSSQLSKVVWSSYV 522
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
RVSVAQ EY EKRQR+T+RAV D+A+ES+ LL ++
Sbjct: 523 FRVSVAQTEYLGEKRQRITIRAVNDTDWASESRLLLAKM 561
>gi|359484959|ref|XP_003633189.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 390
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 314/381 (82%)
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
QLGKVYYIS+G ++VANKQFKTV LNENSEVEE NE IP KF FV I+E+
Sbjct: 10 QLGKVYYISKGAIKVANKQFKTVHLHXXNALNENSEVEEGSNEETLIPXAKFKFVEIEEM 69
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YVNG E V + GVVQ+VSPTM I+RKS+N++VPKRDIT AD+TK+TV VSLWN+ ATN
Sbjct: 70 GPYVNGKERVYVSGVVQSVSPTMRIQRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATN 129
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
VGQELLDNADK PIVAIKSLKVGDFQ +SLSTL S VLV+PD E KKL SWY+SE KG
Sbjct: 130 VGQELLDNADKFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRETKKLISWYDSECKG 189
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
SMASIGS + +K G RSMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKPDQ M
Sbjct: 190 ASMASIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTM 249
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVTDA+GS YWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FN++AER
Sbjct: 250 WYRACKTCNKKVTDAIGSEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAER 309
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
I GCSADEL++LKSQ G++N +Q KLKE WVP L R+SVAQ EY NEKRQR+T RAV P
Sbjct: 310 IFGCSADELDKLKSQEGEENLFQQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVP 369
Query: 601 VDFAAESKFLLEEISKKVSHQ 621
VDFAAES+ LLEEISK + Q
Sbjct: 370 VDFAAESRLLLEEISKMKTSQ 390
>gi|359484858|ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 448
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/381 (72%), Positives = 314/381 (82%), Gaps = 1/381 (0%)
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
QLGKVYYIS+G ++VANK FKTV LNENSEVEE NE IP KF FV I+E+
Sbjct: 69 QLGKVYYISKGAIKVANKXFKTVHLHXXNALNENSEVEEGSNEETLIPXAKFKFVEIEEM 128
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G YVNG E V + GVVQ+VSPTM IRRKS+N++VPKRDIT AD+TK+TV VSLWN+ ATN
Sbjct: 129 GPYVNGKECVYVSGVVQSVSPTMRIRRKSHNDIVPKRDITFADKTKKTVVVSLWNDHATN 188
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
VGQELLDNADK PIVAIKSLKVGDFQ +SLSTL S VLV+PD E KKL SWY+SE KG
Sbjct: 189 VGQELLDNADKFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTREXKKLISWYDSECKG 248
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
SMASI S + S +K G RSMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKPDQ M
Sbjct: 249 ASMASIRSDI-SPSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTM 307
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
WYRACKTCNKKVTDA+GSGYWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FN++AER
Sbjct: 308 WYRACKTCNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAER 367
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
I GCSADEL++LKSQ G++N +Q KLKE WVP L R+SVAQ EY NEKRQR+T RAV P
Sbjct: 368 IFGCSADELDKLKSQEGEENLFQQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVP 427
Query: 601 VDFAAESKFLLEEISKKVSHQ 621
VDFAAES+ LLEEISK + Q
Sbjct: 428 VDFAAESRLLLEEISKMKTSQ 448
>gi|168053891|ref|XP_001779367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669165|gb|EDQ55757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 451
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 244/452 (53%), Positives = 339/452 (75%), Gaps = 5/452 (1%)
Query: 168 LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
+ +++RV+P++SLNPYQGNWTIKVRVTSK +RT+KNARG+G VFNVELTDEDGTQIQAT
Sbjct: 1 MGLSKRVYPILSLNPYQGNWTIKVRVTSKSPLRTFKNARGDGNVFNVELTDEDGTQIQAT 60
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA-VNETAF 286
MF EAA KFYD QL KVY+IS+G+LR+ANKQ+ TV+NDYEM LN NSE+ EA + + F
Sbjct: 61 MFKEAADKFYDVLQLDKVYFISKGSLRMANKQYATVKNDYEMTLNSNSEIVEADIESSTF 120
Query: 287 -IPQTKFNFVPIDELGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
+P +NF I +LGR+++ V D++GVVQ+V P ++ RKSNN+ +PKRDI + D+
Sbjct: 121 KLPSATYNFTKISDLGRHISSKRFVADVLGVVQSVGPLTTVNRKSNNDEIPKRDIVLLDQ 180
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+++TV ++LWN +A G L D +SPI+ K L++ DFQG+SLS+ + VL++P +
Sbjct: 181 SRQTVVLTLWNNMAVKEGASLADLIAESPILMAKGLRLSDFQGVSLSSTMNTMVLINPVI 240
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
P+A +L++WYE +G+ S+ G+ L N RS ++DR L+ I P++G+ KP++
Sbjct: 241 PDANELRTWYEEDGRTASLTPAGASLPG-GTNQNRSSFTDRAVLSDII-QPNVGEGKPMY 298
Query: 465 FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
F+++AYIS IKPDQAMWY AC+TCN+KV + S YWCEGCQ + ++CS RYIM A++ D
Sbjct: 299 FNVRAYISFIKPDQAMWYLACQTCNRKVVEQSSSSYWCEGCQNHYDKCSRRYIMQAKLSD 358
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
SGEAW+S FNE+AE ++G SAD L+E+++Q GDDN YQ +++ W P + R+S AQ E
Sbjct: 359 SSGEAWVSAFNEQAESLLGVSADNLSEMRNQAGDDNQYQNAVRKAMWQPCVYRISAAQTE 418
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
Y +EKRQR+TVR V PVD+ AESK LL +I+K
Sbjct: 419 YMSEKRQRLTVRTVVPVDWVAESKHLLAKITK 450
>gi|147857506|emb|CAN80780.1| hypothetical protein VITISV_011466 [Vitis vinifera]
Length = 280
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/322 (64%), Positives = 236/322 (73%), Gaps = 42/322 (13%)
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+G YVNG E V + GVVQ+VSPTM IRRKS+N++ K+TV VSLWN+ AT
Sbjct: 1 MGPYVNGKERVYVSGVVQSVSPTMRIRRKSHNDI------------KKTVVVSLWNDHAT 48
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
NVGQELLDNADK PIVAIKSLK KKL SWY+SE K
Sbjct: 49 NVGQELLDNADKFPIVAIKSLKXH---------------------ANKKKLISWYDSECK 87
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA 479
G SMASIGS + +K G RSMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKPDQ
Sbjct: 88 GASMASIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQT 147
Query: 480 MWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
MWYRACKTCNKKVTDA+GS YWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FN++AE
Sbjct: 148 MWYRACKTCNKKVTDAIGSEYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAE 207
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
RI GCSADEL++LKSQ KLKE WVP L R+SVAQ EY NEKRQR+T RAV
Sbjct: 208 RIFGCSADELDKLKSQ---------KLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVV 258
Query: 600 PVDFAAESKFLLEEISKKVSHQ 621
PVDFAAES+ LLEEISK + Q
Sbjct: 259 PVDFAAESRLLLEEISKMKTSQ 280
>gi|413944587|gb|AFW77236.1| hypothetical protein ZEAMMB73_509278 [Zea mays]
Length = 464
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/304 (63%), Positives = 229/304 (75%), Gaps = 18/304 (5%)
Query: 324 SIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG 383
S+RRK +NE + KRDI VAD N+LAT GQELLD D SP+VAIKSLKV
Sbjct: 172 SVRRKIDNETILKRDIVVADV----------NDLATRAGQELLDMVDSSPVVAIKSLKVF 221
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS 443
DFQG+SLST+ RST+ ++PDLPEAK L SWY+SEGK TS+ I + G+ G +SMY
Sbjct: 222 DFQGMSLSTIDRSTLEINPDLPEAKNLMSWYDSEGKDTSLVPISAEAGATRAGGFKSMYF 281
Query: 444 DRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCE 503
DRV L++ITSNPS+G EKPVFFS+ A IS IKPDQ MWYRAC TCNKKVT+ SGYWCE
Sbjct: 282 DRVFLSYITSNPSMGQEKPVFFSLYAIISHIKPDQIMWYRACMTCNKKVTEVFRSGYWCE 341
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS-------QL 556
GCQKND ECSLRYIMV +V D + EAW+S+FNE AE+IIGC+ADEL+ ++ Q
Sbjct: 342 GCQKNDSECSLRYIMVIKVSDPTSEAWVSVFNEHAEKIIGCNADELDRIRKEWARHRLQQ 401
Query: 557 GDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
GDD Y +KLKE TWVPHL RVSV Q EY NEKRQR+TVR APVD+AAESK+L+EEI+K
Sbjct: 402 GDD-IYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRGEAPVDYAAESKYLVEEIAK 460
Query: 617 KVSH 620
++
Sbjct: 461 LTAY 464
>gi|62318947|dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]
Length = 253
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/248 (70%), Positives = 212/248 (85%)
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
D+SP++AIKSLKVGDFQG+SLST+ RS V+++P+ PEAKKLKSW++SEGK SM+SIGSG
Sbjct: 1 DQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSG 60
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCN 489
+ AKNG+RS+Y+DRV L+HITSNPSL +EKPVFFS +AYIS IKPDQ MWY+ACKTCN
Sbjct: 61 MSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWYQACKTCN 120
Query: 490 KKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
KKVT+AL SGYWCEGCQ+ EECSLRYIM +V D SGE WIS FN+EAE+I+GCSADEL
Sbjct: 121 KKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADEL 180
Query: 550 NELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKF 609
N+LKS+ G+ N YQ KLKE TW H+ RVSV Q EYN EKRQRVTV+ VAP+DFAAE++
Sbjct: 181 NKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRL 240
Query: 610 LLEEISKK 617
LL++IS K
Sbjct: 241 LLQDISNK 248
>gi|297806841|ref|XP_002871304.1| hypothetical protein ARALYDRAFT_908753 [Arabidopsis lyrata subsp.
lyrata]
gi|297317141|gb|EFH47563.1| hypothetical protein ARALYDRAFT_908753 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 193/245 (78%), Gaps = 19/245 (7%)
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KRDIT+ADETK+TV VSLWN+LAT +G ELLD AD P++AIKSLKVGDFQ
Sbjct: 113 KRDITLADETKKTVVVSLWNDLATGIGHELLDMADNHPVIAIKSLKVGDFQ--------- 163
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
EA KLKSWY++EGK TSM++IGSG+GS A NG+RSMYSDRV L+HITSNP
Sbjct: 164 ----------EATKLKSWYDAEGKETSMSAIGSGMGSSANNGSRSMYSDRVFLSHITSNP 213
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
SLG+EKPVFFS +AYIS IKPDQ MWYRACKTCNKKVT+A+ SGYWCEGC K D+ECSLR
Sbjct: 214 SLGEEKPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCEGCLKKDQECSLR 273
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
YIM +V D +GE W S FN+EAE+IIGC+ADELN LKS+ G+ N +Q K+KE TW HL
Sbjct: 274 YIMAVKVSDSTGETWFSAFNDEAEKIIGCTADELNNLKSEEGEVNEFQTKVKEATWSSHL 333
Query: 576 LRVSV 580
R+S+
Sbjct: 334 FRISI 338
>gi|225444784|ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
vinifera]
gi|297738589|emb|CBI27834.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 345/653 (52%), Gaps = 70/653 (10%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDI-PEIVVQVLDLKLTGN---RYMFNASDGKKRLKAI 56
M ++P+AI+ I + D+ + +VQVLD+KL GN RY F SD +A+
Sbjct: 1 MPVNLTPNAIAAI-------NGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAM 53
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
L + L+ V SG ++ +I+L+DY + + ++ K ++V E + P E
Sbjct: 54 LATQLNDRVKSGQVRKGSVIQLIDYICSVV--QNRKIIVVLNMETIIPECE--------- 102
Query: 117 DESGIIFKPKQEDE----VKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMT- 171
II PK E +K+ PG + V + + GN P+ R ++
Sbjct: 103 ----IIGNPKMNTESHSTAQKEFPG---GNRARSVGVTNNNLSVQNGGNKMPSFRPSVQP 155
Query: 172 --------------------RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV 211
R+ P+ +LNPYQG W IK RVT+KG++R Y NARG+G V
Sbjct: 156 PFQPPPNYKSHGTILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKV 215
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL 271
F+ +L D DG +I+ T FN +FYD ++GKVY IS+G+L+ A K F ++N++E+ L
Sbjct: 216 FSFDLLDSDGGEIRVTCFNAVVDRFYDTIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFL 275
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
+S VE +E IP+ +F+F PI E+ V ++D+IG+V +V+P++ I RK+
Sbjct: 276 EASSSVELCPDEDGSIPKQQFSFRPISEI-ENVENNSILDVIGIVISVNPSVPILRKNGM 334
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGIS 389
E +R + + D + R++ +++W E G +L + D P++A+KS KV DF G S
Sbjct: 335 E-TQRRIVNLKDGSGRSIELTMWGEFCNREGHQLQEMIDSGSFPVLAVKSGKVNDFSGKS 393
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
+ T+ + + ++PD EA L+ W++ GK + SI + G+R+ R +++
Sbjct: 394 VGTISATQLFINPDFTEACNLREWFDRGGKNAASQSISR---DIMPAGSRNEI--RKTVS 448
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCE 503
I +KP + ++KA IS IK D Y AC + CNKKVT + + + C+
Sbjct: 449 QIKDEGLGRSDKPDWVTVKATISFIKTD-TFCYAACPLMIGDRQCNKKVTRSGNTRWQCD 507
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
C + E+C RY++ A+V D +G W++ F E E I+GCSA EL LK + DD +
Sbjct: 508 RCNQEFEDCDYRYLLQAQVQDHTGLTWVTAFQEAGEEILGCSAKELYLLKYEEEDDFRFG 567
Query: 564 MKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ L R+ + ++ Y E+R ++TV V++ +ES+ LL+ ISK
Sbjct: 568 EIIRSRLLNQFLFRLKIKEEMYGEEQRVKITVVKADKVNYTSESRHLLDLISK 620
>gi|449488185|ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 623
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 350/651 (53%), Gaps = 66/651 (10%)
Query: 1 MDKTVSPDAISTILS---NPSPDSSSDIPEIVVQVLDLKLTGN---RYMFNASDGKKRLK 54
M ++P+AIS I++ N P +VQVLD+KL GN RY SD +
Sbjct: 1 MPVHLTPNAISAIVAGDVNSKP---------LVQVLDIKLIGNAQERYSLLISDAVSAEQ 51
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
A+L + L+ V +G ++ +I+L+DY + P K+ K ++V E + L+ EI
Sbjct: 52 AMLATQLNDVVKTGRVKKGSVIQLIDYVCS--PIKNRKIIVVLCLETI--ILDCEIIGNP 107
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIV-------------LKPKQEMVAKSAAQILRDQNG- 160
KS F K V + P V ++ Q V +N
Sbjct: 108 KSSAQSENFAQKATPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHG 167
Query: 161 ----NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
N APA R+ P+ +LNPYQG W IK RVT+KG++R Y NA+G+G VF+ +L
Sbjct: 168 AIIKNEAPA-------RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL 220
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D DG +I+ T FN +FY+ ++GKVY IS+G+L+ A K F ++N++E+ L +S
Sbjct: 221 LDSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASST 280
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
VE +E IP+ +F+F PI E+ ++D+IG+V +++P++ + RK+ E +
Sbjct: 281 VELCPDEDDTIPRQQFSFKPISEI-ENAETNSILDVIGIVTSINPSIPVLRKNGME-TQR 338
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLD--NADKSPIVAIKSLKVGDFQGISLSTLG 394
R + + D + R+V +++W + GQ+L + + SP++A+KS KV DF G S+ T+
Sbjct: 339 RVVYLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTIS 398
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL--GSLAKNGARSMYSDRVSLTHIT 452
+ + ++PDLPEA L+ WY+ GK T+ SI + GS AKN R S
Sbjct: 399 STQLFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGS-AKNDIRKTVSQ-------I 450
Query: 453 SNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGC 505
+ LG +KP + ++KA IS IK D + Y AC + CNKKVT + S + C+ C
Sbjct: 451 KDEGLGRADKPDWITVKATISFIKTD-SFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRC 509
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK 565
+ E+C RY++ A++ D +G W++ F E E I+G S EL LK + DD +
Sbjct: 510 NQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSGKELYMLKYEEQDDVKFGEI 569
Query: 566 LKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ + L R+ + ++ Y +E+R + TV V++++ESK++L+ +SK
Sbjct: 570 IRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYMLDLLSK 620
>gi|405120230|gb|AFR95001.1| damaged DNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 613
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 209/619 (33%), Positives = 338/619 (54%), Gaps = 46/619 (7%)
Query: 21 SSSDIPEI---VVQVLDLKLTG-------NRYMFNASDGKKRLKAILPSNLSSEVISGNI 70
S+ D+ E VVQVL++K +RY SDG+ ++A+L + L+ V S +
Sbjct: 15 STEDVSECFDSVVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQV 74
Query: 71 QNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDE 130
L++++++++N + + K LI+ EVV P + +I V D++ +
Sbjct: 75 DKHSLVKVVNFSVNSVSGR--KLLIILALEVV-PWTDEKIGNPVSVDQAKGGASASAQPG 131
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR------VHPLVSLNPYQ 184
P L+ A AQ+ AP+AR T+ ++P+ L+PYQ
Sbjct: 132 GAHSAP---LQSTTTAPAPGRAQV----PARNAPSARPGNTKHKGDLGPLYPIEGLSPYQ 184
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
WTIK RVT K ++R Y N RG+G +FNV DE G +I+AT FN+A FY+ ++GK
Sbjct: 185 NRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMDETG-EIRATGFNDAVDNFYNLLEVGK 243
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
V+++SR + +A KQF V N+YE+ ++E+E +E+ +PQ K+NF I +LG +
Sbjct: 244 VFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADES--VPQVKYNFKGIGDLGE-L 300
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
++ D+IGVV+ V S+ ++ N+ KR++ + D++ ++V ++LW + A
Sbjct: 301 QKDDVCDVIGVVREVGELGSVTSRATNKPFAKRELQLVDQSGQSVRLTLWGKQAETF--- 357
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
AD P++A K +KVGDF G SLS +T+ ++PD+PEA L+ W+++EG A
Sbjct: 358 ---QADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHSKHFA 414
Query: 425 SIGSG-LGSLAKNGARSMYSDRVSLTHITS--NPSLG-DEKPVFFSIKAYISLIKPDQAM 480
+ + +G A N A S + L I + LG EK FFS +A ++ IK D
Sbjct: 415 AYTTASVGDSAINTATSAAARPAELKTIAQVKDEQLGMSEKTDFFSTEATVAFIKKD-PF 473
Query: 481 WYRACKT---CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE 537
Y AC C KKV + GSG+WCE CQ+ +E RYI+ V D +G+ W++ FNE
Sbjct: 474 SYPACANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNET 532
Query: 538 AERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRA 597
AE+I+G SA++L +LK++ G+D Y + T ++ ++ Q +N++ R R R
Sbjct: 533 AEQIMGISANDLMKLKNE-GNDLDYDAHFAKATARTYVFQMMAKQDSFNDQVRVRYQCRK 591
Query: 598 VAPVDFAAESKFLLEEISK 616
VAP D+ A+S L + IS+
Sbjct: 592 VAPPDYVADSAHLSQMISE 610
>gi|449446612|ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 694
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 215/645 (33%), Positives = 346/645 (53%), Gaps = 66/645 (10%)
Query: 1 MDKTVSPDAISTILS---NPSPDSSSDIPEIVVQVLDLKLTGN---RYMFNASDGKKRLK 54
M ++P+AIS I++ N P +VQVLD+KL GN RY SD +
Sbjct: 1 MPVHLTPNAISAIVAGDVNSKP---------LVQVLDIKLIGNAQERYSLLISDAVSAEQ 51
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
A+L + L+ V +G ++ +I+L+DY + P K+ K ++V E + L+ EI
Sbjct: 52 AMLATQLNDVVKTGRVKKGSVIQLIDYVCS--PIKNRKIIVVLCLETI--ILDCEIIGNP 107
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIV-------------LKPKQEMVAKSAAQILRDQNG- 160
KS F K V + P V ++ Q V +N
Sbjct: 108 KSSAQSENFAQKATPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKNHG 167
Query: 161 ----NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
N APA R+ P+ +LNPYQG W IK RVT+KG++R Y NA+G+G VF+ +L
Sbjct: 168 AIIKNEAPA-------RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL 220
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D DG +I+ T FN +FY+ ++GKVY IS+G+L+ A K F ++N++E+ L +S
Sbjct: 221 LDSDGGEIRVTCFNAVVDRFYEVIEVGKVYLISKGSLKPARKDFNHLKNEWEVFLEASST 280
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
VE +E IP+ +F+F PI E+ ++D+IG+V +++P++ + RK+ E +
Sbjct: 281 VELCPDEDDTIPRQQFSFKPISEI-ENAETNSILDVIGIVTSINPSIPVLRKNGME-TQR 338
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLD--NADKSPIVAIKSLKVGDFQGISLSTLG 394
R + + D + R+V +++W + GQ+L + + SP++A+KS KV DF G S+ T+
Sbjct: 339 RVVYLKDASGRSVELTMWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTIS 398
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL--GSLAKNGARSMYSDRVSLTHIT 452
+ + ++PDLPEA L+ WY+ GK T+ SI + GS AKN R S
Sbjct: 399 STQLFINPDLPEAHILREWYDGGGKNTTSLSISKEIVPGS-AKNDIRKTVSQ-------I 450
Query: 453 SNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGC 505
+ LG +KP + ++KA IS IK D + Y AC + CNKKVT + S + C+ C
Sbjct: 451 KDEGLGRADKPDWITVKATISFIKTD-SFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRC 509
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK 565
+ E+C RY++ A++ D +G W++ F E E I+G SA EL LK + DD +
Sbjct: 510 NQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKELYMLKYEEQDDVKFGEI 569
Query: 566 LKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
++ + L R+ + ++ Y +E+R + TV V++++ESK++
Sbjct: 570 IRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESKYI 614
>gi|134110990|ref|XP_775959.1| hypothetical protein CNBD3660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258625|gb|EAL21312.1| hypothetical protein CNBD3660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 211/620 (34%), Positives = 338/620 (54%), Gaps = 49/620 (7%)
Query: 21 SSSDIPEI---VVQVLDLKLTG-------NRYMFNASDGKKRLKAILPSNLSSEVISGNI 70
S+ D+ E VVQVL++K +RY SDG+ ++A+L + L+ V S +
Sbjct: 15 SAEDVSECFDSVVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQV 74
Query: 71 QNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDE 130
L++++++++N + + K LI+ EVV P + +I V D++ K
Sbjct: 75 DKHSLVKVVNFSVNSVSGR--KLLIILALEVV-PWTDEKIGNPVSVDQA------KSGAS 125
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRDQ-NGNMAPAARLAMTRR------VHPLVSLNPY 183
G P Q A + A R Q G A +AR T+ ++P+ L+PY
Sbjct: 126 ASAQPAGAHSAPLQSATAPAPA---RAQVPGRNASSARPGNTKPKGDLGPLYPIEGLSPY 182
Query: 184 QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLG 243
Q WTIK RVT K ++R Y N RG+G +FNV DE G +I+AT FN+A FY+ ++G
Sbjct: 183 QNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMDETG-EIRATGFNDAVDNFYNLLEVG 241
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
KV+++SR + +A KQF V N+YE+ ++E+E +E+ +PQ K+NF I +LG
Sbjct: 242 KVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADES--VPQVKYNFKGIGDLGE- 298
Query: 304 VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
+ ++ D+IGVV+ V S+ ++ N+ KR++ + D++ ++V ++LW + A
Sbjct: 299 LQKDDVCDVIGVVREVGELGSVTSRATNKPFAKRELQLVDQSGQSVRLTLWGKQAETF-- 356
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM 423
AD P++A K +KVGDF G SLS +T+ ++PD+PEA L+ W+++EG
Sbjct: 357 ----QADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHNKHF 412
Query: 424 -ASIGSGLGSLAKNGARSMYSDRVSLTHITS--NPSLG-DEKPVFFSIKAYISLIKPDQA 479
A + +G A N A + L I + LG EK FFS +A ++ IK D
Sbjct: 413 TAYTTASVGDSAINTAAGAATRPAELKTIAQVKDEQLGMSEKTDFFSTEATVAFIKKD-P 471
Query: 480 MWYRACKT---CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNE 536
Y AC C KKV + GSG+WCE CQ+ +E RYI+ V D +G+ W++ FNE
Sbjct: 472 FSYPACANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNE 530
Query: 537 EAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVR 596
AE+I+G SA++L +LK++ G+D Y + + T ++ ++ Q +N++ R R R
Sbjct: 531 TAEQIMGISANDLMKLKNE-GNDLDYDVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCR 589
Query: 597 AVAPVDFAAESKFLLEEISK 616
VAP D+ A+S L + IS+
Sbjct: 590 KVAPPDYVADSAHLSQMISQ 609
>gi|156369841|ref|XP_001628182.1| predicted protein [Nematostella vectensis]
gi|156215152|gb|EDO36119.1| predicted protein [Nematostella vectensis]
Length = 626
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 227/675 (33%), Positives = 338/675 (50%), Gaps = 106/675 (15%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEI-VVQVLDLKL-------TGNRYMFNASDGKK- 51
M T+S AI IL+ PS D +PE V Q+L LK +RY SDG
Sbjct: 1 MTITLSEGAIQEILNTPS-DQPDRLPEQPVFQILGLKKIQPKQGDASDRYRLVLSDGVLI 59
Query: 52 RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIK 111
A+L + L+ +V G I+ K ++RL Y N I ++ K LI+ + V A E+
Sbjct: 60 HTSAMLATQLNDKVTDGEIEVKAVVRLDKYICN-IIQETRKVLILLELTTVKRASEV--- 115
Query: 112 IEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAAR---- 167
PG + P+ + Q QNGN APA +
Sbjct: 116 ------------------------PGKIGNPRNAADNNAGGQ----QNGNAAPAPKNVGG 147
Query: 168 --------------LAMT-------------------------RRVHPLVSLNPYQGNWT 188
A T + V P+ L PYQ WT
Sbjct: 148 GSFGGQNNPPAQRQQAQTFGSKGFGGGSSYKSNQPVNRGGDGAKTVFPISGLTPYQNRWT 207
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
I+ R+TSK N+RT+ N+RGEG +FNVE+ DE G +I+AT FNEA KFY ++ KV+YI
Sbjct: 208 IRARITSKSNIRTWNNSRGEGRLFNVEMVDESG-EIRATGFNEAVDKFYQMLEVDKVFYI 266
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
++G+LR ANKQ+ +++NDYEM LN N + E NET +P ++NFV I +L +N +
Sbjct: 267 TKGSLRTANKQYSSIRNDYEMYLN-NDTIIEPCNETCNLPTLQYNFVNIGDL-ENINKDQ 324
Query: 309 LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDN 368
+VDI+GVV NV I K+ N+ V KRDIT+ D ++++VT +LW + A ++ ++
Sbjct: 325 IVDILGVVTNVGDLAQITTKTTNKQVSKRDITLLDRSEKSVTATLWGDEA----EKFEEH 380
Query: 369 ADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKLKSWYESEGKGTSMASIG 427
A K+P++AI+ KV DF G SLS L S + V+P D+ EA+ L+ WY++ GK +ASI
Sbjct: 381 AGKNPVLAIRGAKVSDFGGRSLSVLNSSNMRVNPVDMKEAQVLRGWYDNTGKNNEVASIS 440
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACK 486
S G S N LG EK + S+K + + M Y+AC
Sbjct: 441 GQRYSAGGGGPLKFLSQ-------IKNEQLGMGEKADYISVKGVCVYFRRENCM-YKACP 492
Query: 487 T--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
+ CNKKV + SG++CE C + R I+ A + D +G W++ F E AE ++G
Sbjct: 493 SEECNKKVIEE-DSGFYCEKCGRKYPNYKYRLILSAHLADFTGSQWVTCFQESAEALLGR 551
Query: 545 SADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFA 604
SA +L ++K D+ + + H ++ + YN E R + +V V PV++
Sbjct: 552 SASDLGQMKENQ-DEAQFDQVFASSEFKLHTFKIRAKMETYNEETRLKCSVVNVVPVNYK 610
Query: 605 AESKFLLEEISKKVS 619
ESK L++E+ K ++
Sbjct: 611 QESKRLIDEVKKLIA 625
>gi|15225129|ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
gi|4584356|gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana]
gi|26452416|dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana]
gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis thaliana]
gi|330250916|gb|AEC06010.1| replication factor A1 [Arabidopsis thaliana]
Length = 640
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 354/658 (53%), Gaps = 68/658 (10%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN-------RYMFNASDGKKRL 53
M +++P+AI+ I D ++ ++ QVL++K+ G RY F SDG
Sbjct: 1 MPVSLTPNAITAIH-----DGDVNLKPLL-QVLEIKMIGRSQERSQERYRFLISDGVSAQ 54
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV--------SPA 105
A++ L+ V SG + +++L+DY +++ K K ++V E + +P
Sbjct: 55 HAMVAVQLNDRVKSGQFEKGSIVQLIDYICSDV--KGRKLIVVLNMETIVQQSETIGNPT 112
Query: 106 LEMEIKIEVKSDESG---------IIF-KPKQEDEVKKDGPGIV-----------LKPKQ 144
+ E E + SG ++F +P + V + P V +P
Sbjct: 113 IFGETDTEAQKTFSGTGNIPPPNRVVFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSV 172
Query: 145 EMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKN 204
+ + A N P + RV P+ +LNPYQG W IK RVT+KG++R Y N
Sbjct: 173 QPSYQPPASYR-----NHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNN 227
Query: 205 ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ 264
A+G+G VF+ +L D DG +I+ T FN +FYD ++GKVY IS+G+L+ A K F ++
Sbjct: 228 AKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLK 287
Query: 265 NDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMS 324
N++E+ L S VE +E IP+ +F+F PI ++ N T ++D+IGVV +V+P++
Sbjct: 288 NEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENAENNT-ILDVIGVVTSVNPSVP 346
Query: 325 IRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKV 382
I RK+ E +R + + DE+ + V V+LW E G++L + D + P++AIK+ KV
Sbjct: 347 ILRKNGME-THRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKV 405
Query: 383 GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL--GSLAKNGARS 440
DF G S+ T+ + + ++PD PEA KL++W++ GK T+ SI G +++N R
Sbjct: 406 SDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRK 465
Query: 441 MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTD 494
+++ I +KP + ++KA IS IK D + Y AC K CNKKVT
Sbjct: 466 ------NVSQIKEEGLGRSDKPDWITVKATISFIKTD-SFCYTACPLMIGDKQCNKKVTR 518
Query: 495 ALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS 554
+ + + C+ C + +EC RY++ ++ D +G WI+ F E E I+GC A +L +K
Sbjct: 519 SGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYAMKY 578
Query: 555 QLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLE 612
+L + + +++ + ++L++ + ++ Y +E+R ++TV V V++ +ESK++L+
Sbjct: 579 ELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKVNYTSESKYMLD 636
>gi|168050100|ref|XP_001777498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671116|gb|EDQ57673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 632
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/631 (32%), Positives = 338/631 (53%), Gaps = 69/631 (10%)
Query: 29 VVQVLDLKLTGN------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKG-LIRLLDY 81
V+Q++D++ GN R+ SDG +A+L + L+ E + N+ KG +++LL+Y
Sbjct: 23 VLQIVDVRQIGNSQTTTERFRLVLSDGVHLQQAMLATQLN-EKVKNNLAVKGSIVQLLEY 81
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII------------------F 123
N + ++ K +IV E+V E K E+ D +I
Sbjct: 82 ICNTV--QNRKIIIVLNMEIV------ETKAEIIGDPKHLIAGGEHQAPGPGPGPGPGSL 133
Query: 124 KPKQ--------------EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLA 169
+P+Q + + G G +P+ AA GN P +
Sbjct: 134 QPQQPPPRISTPSSATVSANSGSRAGYGQQGQPQNSYGRPMAAYQPAPVYGNRGPIVKNE 193
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
R+ P+ +LNPYQG WTIK RVTSKG +R + NA+GEG VF+ ++ D DG +I+AT F
Sbjct: 194 APARIIPIAALNPYQGRWTIKARVTSKGEIRRFHNAKGEGKVFSFDMLDADGGEIRATCF 253
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
N +F+DR ++GKVY IS+G+L+ A K F ++ND+E+ L S +E +E + IPQ
Sbjct: 254 NNVVDQFHDRIEVGKVYLISKGSLKAAQKNFNHLKNDWEIFLESQSTIEPCYDEDSSIPQ 313
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
++F PI E+ N ++DIIGVV +++PT++I RK+ E KR + + D + R+V
Sbjct: 314 QHYDFRPISEVATLENNA-MIDIIGVVMSITPTVTITRKNGLE-TQKRSLQLKDMSNRSV 371
Query: 350 TVSLWNELATNVGQELLDNADK--SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
+++W GQEL D D +P++A+K+ +V DF G S+ T+ + ++++PD PEA
Sbjct: 372 ELTMWGNFCNKEGQELQDLCDSGANPVLAVKAGRVSDFSGKSVGTISSTQLVINPDHPEA 431
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+K++ W+ EG ++ + G + R ++ I +KP + +I
Sbjct: 432 RKVRDWFNREGMNSTTVFLSREGGGGGR------LEQRKTVAAIKDEGLGRGDKPDWITI 485
Query: 468 KAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVA 520
+A + IKP+ Y AC K C KKVT+ G G W C+ C ++ EC RY++
Sbjct: 486 RATVFYIKPEN-FCYSACPLEVNGKQCMKKVTNN-GDGTWRCDRCDRSVPECDYRYLLSI 543
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
+V D +G WI++F E E ++ +A EL L SQ + + ++++T++ H+ ++ V
Sbjct: 544 QVQDHTGPTWITVFQETGEELMHHTAKELF-LWSQ-DEPQRFSEAIQKLTFMKHIFKLKV 601
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLL 611
++ YN+E+R + T+ V P+D+ +ESK +L
Sbjct: 602 KEETYNDEQRTKSTLVKVDPMDWISESKLML 632
>gi|297831712|ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
lyrata]
gi|297329578|gb|EFH59997.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
lyrata]
Length = 640
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 355/659 (53%), Gaps = 70/659 (10%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIP-EIVVQVLDLKLTGN-------RYMFNASDGKKR 52
M +++P+AI+ I + D+ + ++QVL++K+ G RY F SDG
Sbjct: 1 MPVSLTPNAITAI-------NDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSA 53
Query: 53 LKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEM---- 108
A++ L+ V SG ++ +++L+DY +++ K K ++V E + P E
Sbjct: 54 QHAMVAVQLNDRVKSGQVEKGSIVQLIDYICSDV--KGRKLIVVLNMETIVPHSETIGNP 111
Query: 109 ----EIKIEVKSDESGI---------IF-KPKQEDEVKKDGPGIV-----------LKPK 143
E E + S + +F +P + V + P V +P
Sbjct: 112 TIFGETDTEAQKPLSAVGNIPPPNRVVFNEPTAQHSVNRAPPRGVNIQNPANSTPSFRPS 171
Query: 144 QEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYK 203
+ + A N P + RV P+ +LNPYQG W IK RVT+KG++R Y
Sbjct: 172 VQPSYQPPASYR-----NHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYN 226
Query: 204 NARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTV 263
NA+G+G V++ +L D DG +I+ T FN A +FYD ++GKVY IS+G+L+ A K + +
Sbjct: 227 NAKGDGKVYSFDLLDSDGGEIRVTCFNAVADRFYDVTEVGKVYLISKGSLKPAQKNYNHL 286
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
+N++E+ L S VE +E IP+ +F+F PI ++ N T ++D+IGVV +V+P++
Sbjct: 287 KNEWEIFLESTSTVELCPDEDGSIPRQQFSFRPISDIENAENNT-ILDVIGVVTSVNPSV 345
Query: 324 SIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLK 381
I RK+ E +R + + DE+ + V V+LW E G++L + D + P++AIK+ K
Sbjct: 346 PILRKNGME-THRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGK 404
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL--GSLAKNGAR 439
V DF G S+ T+ + + ++PD PEA KL++W++ GK T+ SI G +++N R
Sbjct: 405 VSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDHGGKDTASFSISRDTMPGGVSRNEIR 464
Query: 440 SMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVT 493
S++ I +KP + ++KA IS IK D + Y AC K CNKKVT
Sbjct: 465 K------SVSQIKEEGLGRSDKPDWITVKATISFIKTD-SFCYTACPLMIGDKQCNKKVT 517
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
+ + + C+ C + +EC RY++ ++ D +G WI+ F E E I+GC A +L LK
Sbjct: 518 RSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQETGEEIMGCPAKKLYALK 577
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLE 612
+L + + +++ + ++L++ + ++ Y +E+R ++TV V +++ +ESK++L+
Sbjct: 578 YELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTVVKVDKMNYTSESKYMLD 636
>gi|42570719|ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
gi|330250915|gb|AEC06009.1| replication factor A1 [Arabidopsis thaliana]
Length = 617
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 338/627 (53%), Gaps = 62/627 (9%)
Query: 32 VLDLKLTGN-------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALN 84
VL++K+ G RY F SDG A++ L+ V SG + +++L+DY +
Sbjct: 3 VLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDYICS 62
Query: 85 EIPTKSEKYLIVTKCEVV--------SPALEMEIKIEVKSDESG---------IIF-KPK 126
++ K K ++V E + +P + E E + SG ++F +P
Sbjct: 63 DV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFNEPM 120
Query: 127 QEDEVKKDGPGIV-----------LKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
+ V + P V +P + + A N P + RV
Sbjct: 121 VQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYR-----NHGPIMKNEAPARVI 175
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +LNPYQG W IK RVT+KG++R Y NA+G+G VF+ +L D DG +I+ T FN +
Sbjct: 176 PIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDR 235
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
FYD ++GKVY IS+G+L+ A K F ++N++E+ L S VE +E IP+ +F+F
Sbjct: 236 FYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFR 295
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PI ++ N T ++D+IGVV +V+P++ I RK+ E +R + + DE+ + V V+LW
Sbjct: 296 PISDIENAENNT-ILDVIGVVTSVNPSVPILRKNGME-THRRILNLKDESGKAVEVTLWG 353
Query: 356 ELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
E G++L + D + P++AIK+ KV DF G S+ T+ + + ++PD PEA KL++W
Sbjct: 354 EFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTW 413
Query: 414 YESEGKGTSMASIGSGL--GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
++ GK T+ SI G +++N R +++ I +KP + ++KA I
Sbjct: 414 FDYGGKDTASFSISRDTMPGGVSRNEIRK------NVSQIKEEGLGRSDKPDWITVKATI 467
Query: 472 SLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
S IK D + Y AC K CNKKVT + + + C+ C + +EC RY++ ++ D
Sbjct: 468 SFIKTD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDH 526
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G WI+ F E E I+GC A +L +K +L + + +++ + ++L++ + ++ Y
Sbjct: 527 TGLTWITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESY 586
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLE 612
+E+R ++TV V V++ +ESK++L+
Sbjct: 587 GDEQRVKMTVVKVDKVNYTSESKYMLD 613
>gi|356556324|ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 637
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 327/627 (52%), Gaps = 55/627 (8%)
Query: 29 VVQVLDLKLTGN---------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLL 79
+VQVLD+ L N RY SD A+L + L+ V +G +Q +++LL
Sbjct: 23 LVQVLDVALVSNSNNSQQQQQRYRLLLSDAVFSHHAMLATQLNDRVRTGRVQKGSVVQLL 82
Query: 80 DYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIV 139
DY P K+ K +++ E + E EI K I + D D
Sbjct: 83 DYICT--PLKNRKIIVILNMETIMD--EFEIIGNPKPYMDSDIPTVRASDSASADSTVEN 138
Query: 140 LKPKQEMVAKSAAQILRDQNGN------------------MAPAARLAMTRRVHPLVSLN 181
L SA Q N P + R+ P+ +LN
Sbjct: 139 LPRSYNSNNSSAGQNASHNNTQNFRPTIQPPYQPPPLYKGRGPVVKNEAPARIIPIAALN 198
Query: 182 PYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQ 241
PYQG W IK RVT+KG++R Y NARG+G VF+ +L D DG +I+ T FN +FY+ +
Sbjct: 199 PYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYNVIE 258
Query: 242 LGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
+GKVY IS+G+L+ A K F ++N++E+ L +S VE +E IP+ +F+F PI ++
Sbjct: 259 VGKVYMISKGSLKPAQKNFNHLKNEWEILLESSSMVELCPDEDGSIPRQQFSFRPISDI- 317
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
V+ ++D+IGVV +V+P++ I RK+ E +R +++ D + +V ++LW E
Sbjct: 318 ENVDNNSILDVIGVVTSVNPSVPILRKNGME-TQRRILSLKDSSGSSVELTLWGEFCNRE 376
Query: 362 GQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
GQ+L D D PI+A+K+ KV DF G S+ ++ + + ++PD PEA L+ W+E GK
Sbjct: 377 GQQLQDMVDAGFFPILAVKTGKVNDFSGKSIGSISTTQLFINPDFPEAHSLREWFELVGK 436
Query: 420 GTSMASIGSGL--GSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKP 476
++ SI + G+L KN R S + LG +KP + +++A I IK
Sbjct: 437 DSASLSISKDIIPGAL-KNEVRKTVSQ-------IKDEGLGRSDKPDWITVRAAILFIKT 488
Query: 477 DQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEA 529
D Y AC + CNKKVT LG+ W C+ C + EEC RY++ ++ DG+G A
Sbjct: 489 D-TFCYTACPLMIGDRQCNKKVT-RLGNTRWQCDRCNQEFEECDYRYLLQVQILDGTGLA 546
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F E E I+ SA +L LK + DD + +K + + R+ + ++ Y +E+
Sbjct: 547 WVTAFQEAGEEIMDYSAKDLYFLKHEEQDDEKFGEIIKSRLFNQFMFRLKIKEELYGDEQ 606
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISK 616
+ ++TV V++++ES+++L+ ISK
Sbjct: 607 KVKITVVKADKVNYSSESRYMLDTISK 633
>gi|303290622|ref|XP_003064598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454196|gb|EEH51503.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 541
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 315/581 (54%), Gaps = 53/581 (9%)
Query: 43 MFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV 102
M N DG +L+A+ LSS++ G ++ +++L D EK V++ E+V
Sbjct: 1 MLN--DGADKLEAMFSPELSSKLAGGFVKPHAVLKLTDVRYK----SEEKRAFVSEFEIV 54
Query: 103 SPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNM 162
V +DE +K E E + A R +G
Sbjct: 55 DDC--------VLTDE----YKENAETE-------------------TPAAKKRKVDGGA 83
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
AP + ++ + SLNPY GNWTIK ++ SKG +RT++NARGEG V +EL D++GT
Sbjct: 84 APTSS---GKKTQSIASLNPYTGNWTIKAKLASKGAVRTFRNARGEGRVCTIELVDDNGT 140
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
IQATM+ +A K+ ++GKVYY+SRG+LR AN+Q+ V NDYEM+L+ ++ +
Sbjct: 141 AIQATMWKDAIDKYDAIMEVGKVYYVSRGSLRPANRQYSNVNNDYEMSLDGKCDISPCED 200
Query: 283 ETAFIPQTK-FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
++ + V ID L + VD++ V V +IRRKS++ V RDIT+
Sbjct: 201 PCDVSKMSRAYELVAIDALPTKIGTRGSVDVLACVAAVGELRAIRRKSDDSEVQVRDITL 260
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS 401
D+TK+TV+++LW ELAT G+ L + + +VA++ L+V D+ G+SLST+ RS ++V
Sbjct: 261 LDDTKKTVSLTLWGELATEQGERLAN--EIGAVVALRGLRVTDYNGVSLSTVQRSELIVE 318
Query: 402 PD----LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN--P 455
P +A L++WY +EG + G+GL + + RV L P
Sbjct: 319 PSGDDIAAKADALRAWYAAEGSTAETTAAGAGLATARGGAGAGAPAQRVDLKAFQPELLP 378
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECS 513
++ V A + L+KPDQ M+Y AC + NKKV + ++CE QK + C
Sbjct: 379 PATNKYEVGILGCATVVLVKPDQPMYYCACPEEGNNKKVVEESPGKWYCEATQKTYDSCR 438
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RYI+ +V D +G W+++F+E+A +++GC A+EL+ L+ + +Y+ K+K + P
Sbjct: 439 RRYILRLKVSDHAGGGWVNVFHEQACQMLGCDAEELHALRES--NPAAYERKVKAAQFKP 496
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
L++ +EY E+++R+TV APVD+AAE+K LL I
Sbjct: 497 WGLKLKSKTEEYQGEQKRRLTVLTCAPVDYAAEAKHLLSLI 537
>gi|302770080|ref|XP_002968459.1| hypothetical protein SELMODRAFT_89304 [Selaginella moellendorffii]
gi|300164103|gb|EFJ30713.1| hypothetical protein SELMODRAFT_89304 [Selaginella moellendorffii]
Length = 636
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 330/630 (52%), Gaps = 61/630 (9%)
Query: 29 VVQVLDLKLTGN------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
+VQVLD+K G+ RY SDG +A+L + L+ V +G + +++L +Y
Sbjct: 24 IVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAMLATQLNEVVKNGTLMKSSIVKLQEYI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIK----------------IEVKSDESG------ 120
N + K K +IV +V++ A + I ++ E G
Sbjct: 84 CNTV--KDRKIVIVLNLDVLAEATSFGGRPTETNSLGGRAAEGSSIGGRTPEPGSFGGQA 141
Query: 121 --IIFKPKQEDEVKKDGPGIVLKPKQEM--VAKSAAQILRDQNGNMAPAARLAMTRRVHP 176
+ + E +++ +P + M A + N P AR + P
Sbjct: 142 TPAVSPYGRPAEARRETIAYGGRPAESMGSYAPNPPYGPPPTYTNRGPIARNEGPPGLVP 201
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ +LNPY G WTIK R+TSK ++R + NARG+G VF+ +L D +G +I+ T FN A +F
Sbjct: 202 IAALNPYHGRWTIKARITSKSDLRRFNNARGDGRVFSFDLLDAEGGEIRVTCFNNVADEF 261
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
Y+R Q+G++Y +S+G+LR A KQF ++ND+E+ ++S V + E + +PQ F+F
Sbjct: 262 YERAQVGRLYMVSKGSLRAAQKQFNHLKNDWEIMFEKDS-VLDPCPEDSSVPQQVFDFKQ 320
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
+ E+ N +VD IGVV V+ T +I RK+ E +R + + D + ++V +++W
Sbjct: 321 VSEIENLPNNA-MVDAIGVVVGVNQTTTIMRKNGTE-TQRRTLQLRDRSGKSVEITMWGN 378
Query: 357 LATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
T GQ L L ++ +SPI+AIK+ +V DF G SL T+ + ++PD PEA+ L+ W+
Sbjct: 379 FCTQEGQHLQELCDSGQSPILAIKAGRVSDFSGKSLGTISSTRFQINPDHPEARSLQLWF 438
Query: 415 ESEGKGTSMASI---GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
E EG+ SI G+G G +N R +++ I EKP F +I+A I
Sbjct: 439 EREGRHAQAQSISREGAGGGGRTEN--------RKTVSQIKDEGLGRSEKPDFVTIRATI 490
Query: 472 SLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCD 524
IK D + Y AC + C+KKVT+ G G W CE C + EC RY++ +V D
Sbjct: 491 HFIKTD-SFCYTACPLQIGDRQCSKKVTNN-GDGTWRCERCDRTVPECDYRYMLSIQVMD 548
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+G W++ F E AE ++G A +L K + D+ + + + + H +V + ++
Sbjct: 549 HTGATWLTGFQEAAEELLGVKAKDLFMWKQE--DNGRFLDHIASIQFTQHHFKVRIKEES 606
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+N+E+R +V ++ +DF AESK++++ I
Sbjct: 607 FNDEQRVKVNIQRAEKLDFVAESKYMIDAI 636
>gi|58266158|ref|XP_570235.1| damaged DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57226468|gb|AAW42928.1| damaged DNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 597
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/620 (33%), Positives = 332/620 (53%), Gaps = 64/620 (10%)
Query: 21 SSSDIPEI---VVQVLDLKLTG-------NRYMFNASDGKKRLKAILPSNLSSEVISGNI 70
S+ D+ E VVQVL++K +RY SDG+ ++A+L + L+ V S +
Sbjct: 15 SAEDVSECFDSVVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQV 74
Query: 71 QNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDE 130
L++++++++N + + K LI+ EVV P + +I V D++ K
Sbjct: 75 DKHSLVKVVNFSVNSVSGR--KLLIILALEVV-PWTDEKIGNPVSVDQA------KSGAS 125
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRDQ-NGNMAPAARLAMTRR------VHPLVSLNPY 183
G P Q A + A R Q G A +AR T+ ++P+ L+PY
Sbjct: 126 ASAQPAGAHSAPLQSATAPAPA---RAQVPGRNASSARPGNTKPKGDLGPLYPIEGLSPY 182
Query: 184 QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLG 243
Q WTIK RVT K ++R Y N RG+G +FNV DE G +I+AT FN+A FY+ ++G
Sbjct: 183 QNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMDETG-EIRATGFNDAVDNFYNLLEVG 241
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
KV+++SR + +A KQF V N+YE+ ++E+E +E+ +PQ K+NF I +LG
Sbjct: 242 KVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADES--VPQVKYNFKGIGDLGE- 298
Query: 304 VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
+ ++ D+IGVV+ + KR++ + D++ ++V ++LW + A
Sbjct: 299 LQKDDVCDVIGVVREFA---------------KRELQLVDQSGQSVRLTLWGKQAETF-- 341
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM 423
AD P++A K +KVGDF G SLS +T+ ++PD+PEA L+ W+++EG
Sbjct: 342 ----QADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHNKHF 397
Query: 424 -ASIGSGLGSLAKNGARSMYSDRVSLTHITS--NPSLG-DEKPVFFSIKAYISLIKPDQA 479
A + +G A N A + L I + LG EK FFS +A ++ IK D
Sbjct: 398 TAYTTASVGDSAINTAAGAATRPAELKTIAQVKDEQLGMSEKTDFFSTEATVAFIKKD-P 456
Query: 480 MWYRACKT---CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNE 536
Y AC C KKV + GSG+WCE CQ+ +E RYI+ V D +G+ W++ FNE
Sbjct: 457 FSYPACANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNE 515
Query: 537 EAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVR 596
AE+I+G SA++L +LK++ G+D Y + + T ++ ++ Q +N++ R R R
Sbjct: 516 TAEQIMGISANDLMKLKNE-GNDLDYDVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCR 574
Query: 597 AVAPVDFAAESKFLLEEISK 616
VAP D+ A+S L + IS+
Sbjct: 575 KVAPPDYVADSAHLSQMISQ 594
>gi|145356040|ref|XP_001422250.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582490|gb|ABP00567.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 573
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 327/601 (54%), Gaps = 58/601 (9%)
Query: 22 SSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDY 81
S+ ++ VQVLD K Y +DG+ + A + ++ SG ++ +++L D
Sbjct: 20 SAGATDVCVQVLDFKSADEAYSATLNDGENTIAAKFAATCGEKLSSGAVKENAVLKLTDV 79
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLK 141
A + + + ++ EVV +
Sbjct: 80 AFETDGVERKPFAVINGFEVVDADV----------------------------------- 104
Query: 142 PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRT 201
+E V AA+ + + A A R A+ PL +LNPY+ WT+KV++T+KGN+R
Sbjct: 105 --KEKVTTPAAKAAKTEPKTPASAERAAV-----PLAALNPYRTPWTVKVKLTNKGNVRE 157
Query: 202 YKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFK 261
YK+ARG G V +V+ DE+GT I AT++ EA K+ ++GKVYY+S+G+L+ A+K++
Sbjct: 158 YKSARGPGKVCSVDFVDEEGTAIGATLWREAIEKYDSVLEVGKVYYVSKGSLKPADKRYS 217
Query: 262 TVQNDYEMNLNENSEVE---EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQN 318
T NDYEMNL+ E++ + +A Q + FVPI++L + VD++ VV+
Sbjct: 218 TSGNDYEMNLDGKCEIDVCNDIDQSSAQKMQRAYAFVPINKLASKIGARGNVDVVAVVKE 277
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
VS SIRRKS+N + KR++ + D++ +TV ++LWN LA VG++L + P+VAI+
Sbjct: 278 VSELSSIRRKSDNTELNKREVVLVDDSAKTVRLTLWNALAVEVGEQLASMTN--PVVAIR 335
Query: 379 SLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNG 437
S++VGD++G+S+ T+ RS +++ P D+P A ++K W+ G + G GL S A+ G
Sbjct: 336 SVRVGDYEGVSIGTVSRSDIVIDPEDVPRAVEIKKWWSEGGSSAETTAAGEGLTS-AQQG 394
Query: 438 ARS--MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT 493
+S M S+ L P +KP F + A+ + KPDQ M+Y A + NKKV
Sbjct: 395 QKSEIMASNLAELQPEEIAPVT--DKPTFAWVCAHTVMCKPDQTMYYTATPEEGNNKKVI 452
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
++ G Y CE + + C RYIM + D S AW++ FNEEA ++ G +A+E++ELK
Sbjct: 453 ESDGKWY-CEANGQTYDTCERRYIMRFKAQDSSEGAWLNAFNEEATKMFGMTANEMHELK 511
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEE 613
D +Y+ +K++T V V +EY E ++R+T PV++AAESK LL +
Sbjct: 512 EN--DFAAYERAVKKMTCQHWSFLVKVVTEEYQGESKRRMTAVKCNPVNYAAESKKLLSK 569
Query: 614 I 614
+
Sbjct: 570 M 570
>gi|321257561|ref|XP_003193631.1| damaged DNA binding protein [Cryptococcus gattii WM276]
gi|317460101|gb|ADV21844.1| Damaged DNA binding protein, putative [Cryptococcus gattii WM276]
Length = 598
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 207/620 (33%), Positives = 330/620 (53%), Gaps = 60/620 (9%)
Query: 18 SPDSSSDIPEIVVQVLDLKLTG-------NRYMFNASDGKKRLKAILPSNLSSEVISGNI 70
S D S+ + VVQVL++K +RY SDG+ ++A+L + L+ V S +
Sbjct: 15 SIDDVSECFDSVVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAMLATQLNHFVESKQV 74
Query: 71 QNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDE 130
L++++++++N + + K LI+ EVV P + +I V D++ K
Sbjct: 75 DKHSLVKVVNFSVNSVSGR--KLLIILALEVV-PWTDEKIGNPVSVDQA------KTGAS 125
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRDQN-GNMAPAARLAMTRR------VHPLVSLNPY 183
G P Q A SA R Q AP+AR T+ ++P+ L+PY
Sbjct: 126 ASAQPAGANSAPHQS--ATSAPASARGQAPARNAPSARSGNTKPKGDLGPLYPIEGLSPY 183
Query: 184 QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLG 243
Q WTIK RVT K ++R Y N RG+G +FNV DE G +I+AT FN+A FY+ ++G
Sbjct: 184 QNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMDETG-EIRATGFNDAVDNFYNLLEVG 242
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
KV+++SR + +A KQF V N+YE+ ++E+E +E+ +PQ K++F I +LG
Sbjct: 243 KVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADES--VPQVKYSFKGIGDLGE- 299
Query: 304 VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
+ ++ D+IGVV+ + KRD+ + D++ ++V ++LW + A
Sbjct: 300 LQKDDVCDVIGVVREFA---------------KRDLQLVDQSGQSVRLTLWGKQAETF-- 342
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM 423
AD P++A K +KVGDF G SLS +T+ ++PD+PEA L+ W+++EG
Sbjct: 343 ----QADDQPVIAFKGVKVGDFGGRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHNKHF 398
Query: 424 -ASIGSGLGSLAKNGARSMYSDRVSLTHITS--NPSLG-DEKPVFFSIKAYISLIKPDQA 479
A + +G A N A + L I + LG EK FFS +A ++ IK D
Sbjct: 399 TAYTNASVGDSAVNTAAGAGTRPAELKTIAQAKDEQLGMSEKTDFFSTEATVAFIKKD-P 457
Query: 480 MWYRACKT---CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNE 536
Y AC C KKV + GSG+WCE CQ+ +E RYI+ V D +G+ W++ FNE
Sbjct: 458 FSYPACANPDNCAKKVVED-GSGWWCEKCQRRWDEPIHRYILSLNVMDYTGQFWMTAFNE 516
Query: 537 EAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVR 596
AE+I+ SA++L +LK++ G+D Y + T ++ ++ Q +N++ R R R
Sbjct: 517 TAEQIMSISANDLMKLKNE-GNDLDYDAHFAKATARTYVFQMMAKQDSFNDQVRVRYQCR 575
Query: 597 AVAPVDFAAESKFLLEEISK 616
VA D+ A+S +L + IS+
Sbjct: 576 KVATPDYVADSAYLSQMISQ 595
>gi|255557709|ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1, putative [Ricinus communis]
Length = 901
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/465 (36%), Positives = 268/465 (57%), Gaps = 19/465 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P A+ R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+G VF+ +L D D
Sbjct: 270 NRGPVAKNEAPPRIMPISALNPYQGRWTIKARVTAKGELRHYNNVRGDGKVFSFDLLDSD 329
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ FN A +FY + + GKVY ISRG L+ A K F + ND E+ L NS ++
Sbjct: 330 GGEIRVICFNTVADQFYHQIEAGKVYLISRGNLKPAQKTFNHLHNDLEIFLESNSVIQPC 389
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ IP+ +F+F PI E+ ++ +VDIIG+V ++P SI RK+ E KR +
Sbjct: 390 FEDDDAIPRQQFHFRPISEV-EGMDNNSVVDIIGMVSCITPVASIMRKNGTE-TQKRTLQ 447
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V ++LW GQ L + D P++A+KS +V DF G ++ T+ S +
Sbjct: 448 LKDNSGRSVELTLWGNFCNAEGQRLQNMCDSGGFPVLAVKSGRVSDFNGKAVGTISTSQL 507
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ PD+PEA++LK W+E EG+ T SI L S+ ++ +++ I
Sbjct: 508 FIEPDIPEARRLKEWFEKEGRNTPSVSISRELSSVGRSEIHK------TISQIKDEKLGT 561
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + +I A + IK D Y AC + C+KKVT+ G G W CE C ++ +E
Sbjct: 562 SEKPDWITINATVIYIKADN-FCYTACPIMAGDRPCSKKVTNN-GDGKWRCEKCDQSMDE 619
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D +G W++ F E E I+G SA +L+ +K + DD S+ L++V +
Sbjct: 620 CDYRYILQLQLQDHTGITWVTAFQESGEEIMGISAKDLHFMKYENQDDESFSKILRQVLF 679
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++++ V ++ +++E+R + TV V+ +++S+FLLE + K
Sbjct: 680 SKFVIKLKVKEETFSDEQRVKSTVVRAEKVNHSSQSRFLLEIMEK 724
>gi|357137873|ref|XP_003570523.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 628
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 346/646 (53%), Gaps = 55/646 (8%)
Query: 5 VSPDAISTILS---NPSPDSSSDIPEIVVQVLDLK---LTGNRYMFNASDGKKRLKAILP 58
++P+A+ +L+ N P +VQVLD++ ++ +R+ N SDG + A+
Sbjct: 6 LTPNAVEAVLAGDVNLRP---------IVQVLDVRCVNVSADRWRGNVSDGVNTVPALFA 56
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIV-------TKCEVV-SPALEMEI 110
LS+ SG ++ +++L +Y +N + + ++V +C+++ +P + E
Sbjct: 57 GQLSALARSGAVRGGTILQLDEYVINNVGGGPRRIIVVLNMTVLRAECDIIGNPTITPET 116
Query: 111 KIEVKSDESGIIFKPKQEDEVKKDG---PGI------VLKPKQEMVAKSAAQILRDQNGN 161
++ ++ F ++ V + P + V +P + + A N
Sbjct: 117 RLPNQNHSGAEQFNGIRQPSVAANSLNTPTMLGHQAPVFQPTAQPSYRPAPSY-----KN 171
Query: 162 MAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDG 221
P A+ R+ P+ SLNPYQG W IK RVT+KG++R Y NA+GEG VFN +L D DG
Sbjct: 172 HGPIAKNEAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNAKGEGKVFNFDLLDSDG 231
Query: 222 TQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV 281
+I+ T FN+ +FY+ ++GKVY +SRG L+ A K F + N++E+ L+ S V+
Sbjct: 232 GEIRVTCFNDLVDRFYEVVEVGKVYVVSRGNLKPAQKNFNHLNNEWEIVLDNGSSVDLCP 291
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+E + IP +FNF PI E+ N T ++D+IGVV +VSP +I++K+ E KR I +
Sbjct: 292 DENSSIPSQRFNFRPISEVEDTPNAT-ILDMIGVVISVSPCTTIQKKNGME-TQKRIINL 349
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVL 399
D + R+V V++W E G +L + ++ P++A+K+ +V DF G S+ T+ S +L
Sbjct: 350 KDMSGRSVDVTMWGEFCNREGSQLQETVERGVFPVLAVKTGRVNDFGGKSVGTISSSQLL 409
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD 459
+ PD+ EA L+ W++ G+ S SI S A S + R ++ I +
Sbjct: 410 IDPDIVEAHSLRQWFDGGGRDASTQSI-----SRDATPAASRNAIRKTVAQIKEEGLGME 464
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECS 513
+KP + ++KA + K ++ Y +C + CNKKVT ++C+ C + EC
Sbjct: 465 DKPDWVTVKASVIFFK-NENFCYTSCPNKEGDRQCNKKVTKGTSGLWYCDKCNREFTECD 523
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RY++ ++ D SG AW++ F E + ++G SA +L+ K + +D + + +
Sbjct: 524 YRYLLQLQIQDHSGTAWVTAFQEAGQELLGVSASDLSRFKEE--EDPRFAETMLRCLFQD 581
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
+LLR+ V ++ Y +E+R + T+ V D A ESK+LL+ IS+ V+
Sbjct: 582 YLLRLKVKEETYGDERRVKNTLAKVERFDPAGESKYLLDTISRLVA 627
>gi|297743679|emb|CBI36562.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 158/181 (87%)
Query: 441 MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGY 500
MY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKPDQ MWYRACKTCNKKVTDA+GSGY
Sbjct: 1 MYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRACKTCNKKVTDAIGSGY 60
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDN 560
WCEGCQKND+ECSLRYIMV +V D SGEAW+S+FN++AERI GCSADEL++LKSQ G++N
Sbjct: 61 WCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQEGEEN 120
Query: 561 SYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
+Q KLKE WVP L R+SVAQ EY NEKRQR+T RAV PVDFAAES+ LLEEISK +
Sbjct: 121 LFQQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEISKMKTS 180
Query: 621 Q 621
Q
Sbjct: 181 Q 181
>gi|356529769|ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Glycine max]
Length = 894
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 272/486 (55%), Gaps = 21/486 (4%)
Query: 141 KPKQEMVAKSAAQILRDQNG----NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSK 196
+P Q A+ Q + Q N AP R R+ P+ +LNPYQ WTIK RVT K
Sbjct: 213 RPLQNSYARPPQQPMYRQPSPMYTNRAPMGRNEAAPRIIPIAALNPYQSMWTIKARVTFK 272
Query: 197 GNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
G +R Y NARG+G VF+ +L D DG +I+AT FN A +FY+ + GKVY ISRG+++ A
Sbjct: 273 GELRHYTNARGDGKVFSFDLLDSDGGEIRATCFNAVADQFYNVIEAGKVYLISRGSIKPA 332
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
K F ++ND E+ L+ S ++ +++ IP FN+ PI E+ N + +VD+IGVV
Sbjct: 333 QKNFNHLRNDQELTLDVASIIQPCLDDNDSIPSQTFNYRPISEIESLENNS-IVDVIGVV 391
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL--LDNADKSPI 374
++SPT SI RK+ E V KR + + D + R+V ++LW GQ L + +A + P+
Sbjct: 392 TSISPTASIMRKNGTE-VQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICDAGEFPV 450
Query: 375 VAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLA 434
+A K+++V DF G S+ T+ S + V PD PEA LK W+E+EGK SI + +L
Sbjct: 451 LATKAVRVNDFNGKSVGTIATSQLYVEPDFPEACTLKRWFENEGKSVPTLSISREISNLG 510
Query: 435 KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTC 488
K R +++ I EKP + S+ A +S IK D Y C + C
Sbjct: 511 KTDVRK------TISQIKDEKLGTSEKPDWISVFAAVSHIKVDN-FCYPGCPLKIGDRQC 563
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
NKKVT+ + CE C ++ + C RY++ ++ D +G W++ F E E I+G A +
Sbjct: 564 NKKVTNNADGTWHCERCNQSIDTCDFRYLLSMQIQDHTGITWVTAFQESGEEIMGIPAKD 623
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
L +K + DD+ + +V + ++ ++ + ++ Y++E+R + T+ V+FA++S+
Sbjct: 624 LYYMKYEEQDDDKFSEIFHKVLFTEYMFKLRIKEEFYSDEQRIKSTIVKAEKVNFASKSR 683
Query: 609 FLLEEI 614
LE I
Sbjct: 684 VNLELI 689
>gi|168046036|ref|XP_001775481.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673151|gb|EDQ59678.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 626
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 195/633 (30%), Positives = 340/633 (53%), Gaps = 79/633 (12%)
Query: 29 VVQVLDLKLTGN------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKG-LIRLLDY 81
V+Q++D++ GN R+ SDG +A+L + L+ E + N+ KG +++LL+Y
Sbjct: 23 VLQIVDIRQIGNAQTTTERFRLVLSDGVHLQQAMLATQLN-EKVKNNLAVKGSIVQLLEY 81
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQE-----------DE 130
N + ++ K +IV E+V E K ++ D ++ + + +
Sbjct: 82 ICNTV--QNRKIIIVLNMEIV------ESKADIIGDPKHLVAGGEHQAGPGPGPGPGSSQ 133
Query: 131 VKKDGPGIVLKPK----------------------QEMVAKSAAQILRDQNGNMAPAARL 168
+++ P + PK + M A A + GN P +
Sbjct: 134 LQQPSPSL---PKNTTANGVGVGYGQQGQQQNAYGRPMAAYQPAPVY----GNRGPIVKN 186
Query: 169 AMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
R+ P+ +LNPYQG WTIK R+T+KG +R + NA+GEG VF+ ++ D DG +I+AT
Sbjct: 187 EAPARIIPIAALNPYQGRWTIKARITAKGEIRRFHNAKGEGKVFSFDMLDADGGEIRATC 246
Query: 229 FNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
FN +F++R ++GKVY IS+G+L+ A K F ++ND+E+ L + +E E + IP
Sbjct: 247 FNNVVDQFHERIEVGKVYLISKGSLKAAQKNFNHLKNDWEIFLESQTTIEPCYEEDSSIP 306
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q ++F PI E+ N ++DI+GVV +++PT +I RK+ E KR + + D + R+
Sbjct: 307 QQHYDFKPISEVEALENNA-MIDIVGVVMSINPTTTIMRKNGLE-TQKRSLQMKDMSNRS 364
Query: 349 VTVSLWNELATNVGQELLDNADK--SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V +++W + GQEL D D +P++A+K+ +V DF G S+ T+ + + ++PD PE
Sbjct: 365 VELTMWGSFCSKEGQELQDLCDSGANPVLAVKAGRVSDFSGKSVGTISSTQLAINPDHPE 424
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFF 465
A++++ W+E EGK T+ S+ G + R + + LG +KP +
Sbjct: 425 ARRVRDWFEREGKNTATVSLSREGGGGGRLEQRKTVA-------AIKDEGLGRGDKPDWI 477
Query: 466 SIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIM 518
+++A + IKP+ Y AC K C KKVT+ G G W C+ C ++ EC RY++
Sbjct: 478 TVRATVFYIKPEN-FCYPACPLEVNGKQCMKKVTNN-GDGTWRCDRCDRSVPECDYRYLL 535
Query: 519 VARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRV 578
+V D +G WI++F E E ++ +A EL L SQ + + ++++T+ H+ ++
Sbjct: 536 SIQVQDHTGPTWITVFQETGEELMQHTAKELF-LWSQ-DEPQRFSEAIQKLTFTKHVFKL 593
Query: 579 SVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLL 611
V ++ YN+E+R + T+ V +D+ +E+K +L
Sbjct: 594 KVKEETYNDEQRTKSTLVKVDRMDWVSENKLML 626
>gi|33621259|gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
Length = 637
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 325/611 (53%), Gaps = 54/611 (8%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYL-----I 95
RY SD A+L + L+ V +G ++N +++LLDY + + I
Sbjct: 42 RYRVLLSDAVSSHHAMLAAQLNDLVTTGRVKNGSIVQLLDYICTLFQNRKIIMVLNMESI 101
Query: 96 VTKCEVVS---PALEMEIKIE--VKSDESG-----------------IIFKPKQEDEVKK 133
+ CE++ P ++ E+ ++ ++ + G + + V+
Sbjct: 102 IPDCEIIGSPKPFVDSELPVQKALRDNTVGSSINSNNNNSYNSNSNILAAQNTGSTHVQN 161
Query: 134 DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRV 193
P I K V K +++ N APA R P+ +LNPYQG W I+ RV
Sbjct: 162 FRPTIQPSYKPPPVYKGRGAVMK----NEAPA-------RTIPIAALNPYQGRWAIRARV 210
Query: 194 TSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTL 253
T+KG++R Y NARG+G VF+ +L D DG +I+ T FN +FYD ++GKVY IS+G L
Sbjct: 211 TAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAIVDRFYDSIEVGKVYLISKGNL 270
Query: 254 RVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDII 313
+ A K F ++N++E+ L+ NS VE +E P+ +F+F PI ++ V ++D+I
Sbjct: 271 KPAQKNFNHLKNEWEIMLDLNSTVELCPDEDGSYPKQQFSFRPISDI-ENVESNAILDVI 329
Query: 314 GVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS- 372
GVV +V+P++ I RK+ E + +R + + D + R+V ++LW E GQ+L + D
Sbjct: 330 GVVTSVNPSVPILRKNGMETL-RRILNLKDNSGRSVELTLWGEFCNREGQKLQEMVDAGV 388
Query: 373 -PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLG 431
PI+A+K+ KV +F G S+ ++ + + ++PD PEA+ L++W++ GK ++ SI
Sbjct: 389 FPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSLRAWFDQVGKDSASLSISK--- 445
Query: 432 SLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------ 485
+ G ++ R +++ I +KP + +I+A IS +K D Y AC
Sbjct: 446 DITHGGPKNEI--RKTVSQIRDEGLGRSDKPDWITIRATISFMKTD-TFCYTACPLMIGD 502
Query: 486 KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS 545
+ CNKKVT + + + C+ C + EEC RY++ A++ D +G W++ F E E I+G
Sbjct: 503 RQCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQEGGEEIMGYP 562
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
A EL LK + DD + +K + + R+ + ++ Y E++ + TV V+++A
Sbjct: 563 AKELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQKVKSTVVKADKVNYSA 622
Query: 606 ESKFLLEEISK 616
ES+++L+ ISK
Sbjct: 623 ESRYMLDLISK 633
>gi|297736060|emb|CBI24098.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 136/181 (75%), Positives = 157/181 (86%)
Query: 441 MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGY 500
MY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKPDQ MWYRACKTCNKKVTDA+GS Y
Sbjct: 1 MYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRACKTCNKKVTDAIGSEY 60
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDN 560
WCEGCQKND+ECSLRYIMV +V D SGEAW+S+FN++AERI GCSADEL++LKSQ G++N
Sbjct: 61 WCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQEGEEN 120
Query: 561 SYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
+Q KLKE WVP L R+SVAQ EY NEKRQR+T RAV PVDFAAES+ LLEEISK +
Sbjct: 121 LFQQKLKEAIWVPQLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEISKMKTS 180
Query: 621 Q 621
Q
Sbjct: 181 Q 181
>gi|449456771|ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 266/465 (57%), Gaps = 19/465 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P A+ R+ P+ +LNPYQG WTIK RVTSKG +R Y N RG+G VF+ +L D
Sbjct: 253 NRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAY 312
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
+I+ T FN A +FY++ + GKVY+IS+G+L+ A K F ++NDYE+ L S ++
Sbjct: 313 RGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPC 372
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ IPQ +F+F I E+ ++ +VD+IGVV +++P S+ RK+ E KR +
Sbjct: 373 FEDDQSIPQQQFHFHQIGEI-EGMDSNSVVDVIGVVSSINPATSLMRKNGTE-TQKRSLQ 430
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V ++LW GQ L + D P++A+KS +V DF G ++ T+ S +
Sbjct: 431 LKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQL 490
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ PD PEA L+ W+E EG+ T SI + S+ + R +++ I
Sbjct: 491 FIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRK------TISQIKDERLGT 544
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + ++ A +S IK D + Y AC + C+KKVT+ G G W C+ C ++ +E
Sbjct: 545 SEKPDWITVSATVSFIKVD-SFCYTACPIMIGDRQCSKKVTNN-GDGKWRCDRCDQSVDE 602
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D +G W++ F E E I+G A L LK + DD + +++V +
Sbjct: 603 CDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLF 662
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++++ + ++ +++E+R R TV ++F++ES+FLL + K
Sbjct: 663 TKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEK 707
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 20 DSSSDIPEIVVQVLDLKLTGN-------RYMFNASDGKKRLKAILPSNLSSEVISGNIQN 72
+SS++ + ++QV+DLKL R+ SDG + +L + L+ V SG +Q
Sbjct: 22 ESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQK 81
Query: 73 KGLIRLLDYALNEIPTKSEKYLIVTKCEVV 102
++RL Y N P + +IV + +V+
Sbjct: 82 GSIVRLRQYVCN--PVQERLIIIVIELDVI 109
>gi|196010750|ref|XP_002115239.1| hypothetical protein TRIADDRAFT_50671 [Trichoplax adhaerens]
gi|190582010|gb|EDV22084.1| hypothetical protein TRIADDRAFT_50671 [Trichoplax adhaerens]
Length = 556
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 316/580 (54%), Gaps = 53/580 (9%)
Query: 41 RYMFNASDGKKRLKAI-LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+++ SDG ++ L + L+ V SG + K +I+L +Y N I ++ K L++
Sbjct: 22 KWLIVLSDGIHAYSSVMLATQLNQRVTSGELDAKAIIKLNNYTCN-IVQETRKVLVI--- 77
Query: 100 EVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQN 159
+++ + E+ II +PK ++ P + P+Q +V KS +I
Sbjct: 78 --------LDLTVLTCGSETDIIGQPKPYNDQSVTNPRPTIHPQQNLVDKSENRI----- 124
Query: 160 GNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE 219
V P+ SL PYQ WTI+ RVTSK +R + N+RGEG +F+V+L DE
Sbjct: 125 --------------VFPISSLTPYQNRWTIRTRVTSKSEIRKWSNSRGEGKLFSVDLIDE 170
Query: 220 DGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
G +I+AT F + KFYD ++ KVYYISR +++ ANK F +++NDYEM + VE
Sbjct: 171 SG-EIRATAFRDQVEKFYDVLEVNKVYYISRCSIKTANKNFTSIKNDYEMTFTNETAVEP 229
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++ A +P+ FNFV I ++ ++D++GVV++ ++I KSN + V KRDI
Sbjct: 230 C-DDIASLPKVSFNFVRIGDIENQ-PAERMIDVVGVVKSADDVVTINTKSNRQ-VNKRDI 286
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL 399
+ D++ + V ++LW TN E D + + P+VA++ +V +F G SLS +G S ++
Sbjct: 287 ELVDDSGKVVRLTLW---GTNA--EEFDGS-QFPVVAVRGARVTEFGGRSLSVVGSSQLM 340
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG- 458
+PD+PEA L+ W++ +GK + SI + G + G + + +S H +LG
Sbjct: 341 TNPDIPEAHILRGWFDVQGKDQELVSISTKRGDIGSPGFSGNWKN-ISDIH---GENLGQ 396
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
EK +F++KA I I+ + M Y+AC + CNKKV D GS Y CE C + + R
Sbjct: 397 QEKADYFNLKATIIYIRKENLM-YKACPKEDCNKKVIDQGGS-YRCEKCNQTFPDFKYRL 454
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
++ A + D +G W++ F E E ++ C+A +L K D++ Y+ + E + ++L
Sbjct: 455 MISASIVDSTGSNWLTFFQETGEAMLKCTAQQLGAWKE--NDESKYEHTINEALFQSYIL 512
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+V + +N+E R + + + P+D+ +S+ LLE I +
Sbjct: 513 KVRAKMESFNDENRLKCSCVNLTPMDYVQQSRRLLEGIRR 552
>gi|225427514|ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 269/466 (57%), Gaps = 19/466 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P AR R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+G VF+ +L D D
Sbjct: 257 NRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNNPRGDGKVFSFDLLDSD 316
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN A +FY++ + GKVY IS+G+L+ A K F ++ND+E+ L S ++
Sbjct: 317 GGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPC 376
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
++ IP+ +F+F I ++ N + +VD+IGVV +SP+ SI RK+ E KR +
Sbjct: 377 FDDDNSIPRQQFHFRSISDVESMENNS-VVDVIGVVSFISPSASIMRKNGTE-TQKRALH 434
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V ++LW GQ L + D P++A+KS +V DF G ++ T+ S +
Sbjct: 435 LKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDFNGKAVGTISTSQL 494
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ PD PEA+KLK W++ EG+ T SI + S+ + R +++ I
Sbjct: 495 FIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRK------TISQIKDERLGT 548
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + ++ A +S IK D Y AC + CNKKVT+ G G W CE C ++ ++
Sbjct: 549 SEKPDWITVCATVSFIKVDN-FCYTACPIMIGDRQCNKKVTNN-GDGKWRCERCDQSVDD 606
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D +G W++ F E E I+G SA L LK + DD + L+ V +
Sbjct: 607 CDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEILRGVLF 666
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKK 617
+ ++ V ++ +++E+R + TV V+F++ES+FLL+ + K
Sbjct: 667 TKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKH 712
>gi|15242405|ref|NP_199353.1| replication factor-A protein 1-like protein [Arabidopsis thaliana]
gi|9758730|dbj|BAB09168.1| replication protein A1-like [Arabidopsis thaliana]
gi|332007861|gb|AED95244.1| replication factor-A protein 1-like protein [Arabidopsis thaliana]
Length = 853
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 268/465 (57%), Gaps = 20/465 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P AR R++P+ +LNPYQG WTIKVRVTSK ++R + N RGEG +F+ +L D D
Sbjct: 286 NRGPVARNEAPPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDAD 345
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN+A +F+D+ +G VY ISRG L+ A K F + NDYE++L+ S ++
Sbjct: 346 GGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC 405
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
++ IP+ F+F I ++ N + D+IG+V ++SPT++I RK+ E V KR +
Sbjct: 406 EDD-GTIPRYHFHFRNIGDIENMENNS-TTDVIGIVSSISPTVAIMRKNLTE-VQKRSLQ 462
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V V++W GQ+L + D P++A+K+ ++G+F G +ST+G S
Sbjct: 463 LKDMSGRSVEVTMWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQF 522
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ PD PEA++L+ WYE EG+ SI + + R + + I
Sbjct: 523 FIEPDFPEARELRQWYEREGRNAHFTSISREFSGVGRQEVRKV------IAQIKDEKLGT 576
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + ++ A IS +K + Y AC + C+KKVT+ G G W CE C K +E
Sbjct: 577 SEKPDWITVCATISFMKVEN-FCYTACPIMNGDRPCSKKVTNN-GDGTWRCEKCDKCVDE 634
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D + W + F E E I+G SA +L +K + D+ ++ ++ V +
Sbjct: 635 CDYRYILQIQLQDHTDLTWATAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAF 694
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ ++ + ++ Y++E+R + TV +++++ ++F+LE I K
Sbjct: 695 TKYIFKLKIKEETYSDEQRVKATVVKAEKLNYSSNTRFMLEAIDK 739
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 29 VVQVLDLKL----------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRL 78
V+QV +LKL + NRY F SDG +L ++L+S V G IQ +IRL
Sbjct: 27 VLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGMLNTSLNSLVNQGTIQLGSVIRL 86
Query: 79 LDYALNEIPTKS-----EKYLIVTKCEVV 102
Y N I T+ + +IV KC ++
Sbjct: 87 THYICNLIQTRRIVVIMQLEVIVEKCNII 115
>gi|2828288|emb|CAA16702.1| replication A protein-like [Arabidopsis thaliana]
gi|7268708|emb|CAB78915.1| replication A protein-like [Arabidopsis thaliana]
Length = 717
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 336/634 (52%), Gaps = 51/634 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL-------TGNRYMFNASDGKKRL 53
M+ +++ AI I++ + IP V+QV DLK T R+ SDG
Sbjct: 2 MEVSLTAGAIGKIMNGEVTTEADMIP--VLQVTDLKQIMAQQDPTRERFRMVLSDGTYLH 59
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIE 113
+ +L ++L++ V G +Q ++RL + + I K + +IV P LE+ +I
Sbjct: 60 QGMLGTDLNNLVKEGTLQPGSIVRLTRFVGDVI--KGRRIVIV-------PQLEVLKQI- 109
Query: 114 VKSDESGIIFKP----KQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLA 169
S II P K D+ D +Q+ + N A + ++
Sbjct: 110 -----SDIIGHPVPGGKHNDQRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVG 164
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
++ P+ +L+PY G WTIK RVT+K ++ Y N RGEG VFN +L D DG +I+ T F
Sbjct: 165 APPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCF 224
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
N A +FYD+ +G +Y ISRG+LR A K F ++NDYE+ L+ S +++ E A IP+
Sbjct: 225 NAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPR 284
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+F+F I ++ N +VD+IG+V ++SPT++I RK N PKR + + D + R+V
Sbjct: 285 HQFHFRTIGDIESMENNC-IVDVIGIVSSISPTVTITRK-NGTATPKRSLQLKDMSGRSV 342
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
V++W + Q L D+ P++A+K+ ++ +F G ++ST+G S + + PD EA+K
Sbjct: 343 EVTMWGDF-----QSLCDSG-VFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEK 396
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
LK+W+E EGK S+ K R +++ I EKP + ++ A
Sbjct: 397 LKNWFEREGKSVPCISLSREFSGSGKVDVRK------TISQIKDEKLGTSEKPDWITVSA 450
Query: 470 YISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARV 522
I +K D Y AC + C+KKVTD G G W CE C K+ +EC RYI+ ++
Sbjct: 451 TILYLKFDN-FCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSVDECDYRYILQLQI 508
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
D + ++ F E E I+G SA +L +K++ D+ ++ +++V + + ++ V +
Sbjct: 509 QDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKE 568
Query: 583 QEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ +++E+R + TV V ++++A+++ +L + K
Sbjct: 569 ETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDK 602
>gi|302774432|ref|XP_002970633.1| hypothetical protein SELMODRAFT_441216 [Selaginella moellendorffii]
gi|300162149|gb|EFJ28763.1| hypothetical protein SELMODRAFT_441216 [Selaginella moellendorffii]
Length = 815
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 269/468 (57%), Gaps = 27/468 (5%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P AR + P+ +LNPY G WTIK R+TSK ++R + NARG+G VF+ +L D +
Sbjct: 262 NRGPIARNEGPPGLVPIAALNPYHGRWTIKARITSKSDLRRFNNARGDGRVFSFDLLDAE 321
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN A +FY+R Q+G++Y +S+G+LR A KQF ++ND+E+ ++S V +
Sbjct: 322 GGEIRVTCFNNVADEFYERAQVGRLYMVSKGSLRAAQKQFNHLKNDWEIMFEKDS-VLDP 380
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
E + +PQ F+F + E+ N +VD IGVV V+ T +I RK+ E +R +
Sbjct: 381 CPEDSSVPQQVFDFKQVSEIENLPN-NAMVDAIGVVVGVNQTTTIMRKNGTE-TQRRTLQ 438
Query: 341 VADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + ++V +++W T GQ L L ++ +SPI+AIK+ +V DF G SL T+ +
Sbjct: 439 LRDRSGKSVEITMWGNFCTQEGQHLQELCDSGQSPILAIKAGRVSDFSGKSLGTISSTRF 498
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASI---GSGLGSLAKNGARSMYSDRVSLTHITSNP 455
++PD PEA+ L+ W+E EG+ SI G+G G +N R +++ I
Sbjct: 499 QINPDHPEARSLQLWFEREGRHAQAQSISREGAGGGGRTEN--------RKTVSQIKDEG 550
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKN 508
EKP F +I+A I IK D + Y AC + C+KKVT+ G G W CE C +
Sbjct: 551 LGRSEKPDFVTIRATIHFIKTD-SFCYTACPLQIGDRQCSKKVTNN-GDGTWRCERCDRT 608
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
EC RY++ +V D +G W++ F E AE ++G A +L K + D+ + +
Sbjct: 609 VPECDYRYMLSIQVMDHTGATWLTGFQEAAEELLGVKAKDLFMWKQE--DNGRFLDHIAS 666
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + H +V + ++ +N+E+R +V ++ +DF AESK++++ I K
Sbjct: 667 IQFTQHHFKVRIKEESFNDEQRVKVNIQRAEKLDFVAESKYMIDAIGK 714
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 29 VVQVLDLKLTGN------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
+VQVLD+K G+ RY SDG +A+L + L+ V +G + +++L +Y
Sbjct: 24 IVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAMLATQLNEVVKNGTLMKSSIVKLQEYI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEM 108
N + K K +IV +V+ EM
Sbjct: 84 CNTV--KDRKIVIVLNLDVLVSNAEM 107
>gi|443893823|dbj|GAC71279.1| hypothetical protein PANT_2d00035 [Pseudozyma antarctica T-34]
Length = 606
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 200/620 (32%), Positives = 321/620 (51%), Gaps = 39/620 (6%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLK----------LTGNRYMFNASDGKKRLKAILP 58
AI+ ++ P SS P V Q+L +K G+RY SDG K +A+L
Sbjct: 10 AIAQMVQTADPSSSVQNP--VCQILSIKKIQASAASASSMGDRYRIILSDGVKYAQAMLA 67
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
S S V SG ++ L+R+ YA N + + + LI+ VV P I D+
Sbjct: 68 SQKRSMVESGELEKHCLVRISQYASNSV--QGRRILILLDLSVVHPPTADRIGSPTNVDD 125
Query: 119 SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLV 178
S KP E VK++G A + + + G PA A ++P+
Sbjct: 126 S---IKP--EGGVKQEGGA--------GGALGNSNVGNNSAGRTTPATS-AAGMPIYPIE 171
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
L+PYQ WTIK RVTSK ++R + N RGEG +F+V L D+ G +I+AT FN+A +FY
Sbjct: 172 GLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLDDSG-EIKATGFNDAVDRFYS 230
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
Q VY IS+ + +A KQF +QN+YE+ ++E+EE + T +P+ K+ FV I+
Sbjct: 231 MLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDATD-VPEVKYEFVRIN 289
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
EL V + D+IGV+ + I K++ V KR++T+ D+ +R+V ++LW + A
Sbjct: 290 EL-ESVEPNQTCDVIGVLDSYGELSEIVSKASQRPVQKRELTLVDQGQRSVRLTLWGKNA 348
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
N D+ P++A K +KVGDF G SLS ST+L++PD+ E+ L+ W++++G
Sbjct: 349 ENFPNHA--GVDEKPVIAFKGVKVGDFGGRSLSMFSSSTMLINPDITESHVLRGWFDNDG 406
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPD 477
+G G+ G + + +LG EKP +F+++A + IK +
Sbjct: 407 AHAQFQPFTNGGGAGGAMGGGAANMAERRTIAQVKDQNLGMTEKPDYFNVRATVVYIKQE 466
Query: 478 QAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
++Y AC + CNKKVT + CE C ++ E+ RYI+ V D +G+ W+S FN
Sbjct: 467 N-LYYTACPSDGCNKKVTPDHEGNWRCEKCDRSYEQPEYRYILSTNVADATGQIWLSGFN 525
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
++A +++G SA EL++L+ + ++ + L + +N++ R R T+
Sbjct: 526 DDATKLMGMSAGELHKLREE--SESEFTAVLHRAANRMYTFNCRAKMDSFNDQARVRYTI 583
Query: 596 RAVAPVDFAAESKFLLEEIS 615
APVDFA L++ I+
Sbjct: 584 SRAAPVDFAKAGAELVDAIN 603
>gi|147856620|emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 268/466 (57%), Gaps = 19/466 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P AR R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+G VF+ +L D D
Sbjct: 257 NRGPVARNEAXARIIPIAALNPYQGRWTIKARVTAKGELRHYNNPRGDGKVFSFDLLDSD 316
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN A +FY++ + GKVY IS+G+L+ A K F ++ND+E+ L S ++
Sbjct: 317 GGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPC 376
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
++ IP+ +F+F I ++ N + +VD+IGVV +SP+ SI RK+ E KR +
Sbjct: 377 FDDDNSIPRQQFHFRXISDVESMENNS-VVDVIGVVSFISPSASIMRKNGTE-TQKRALH 434
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V ++LW GQ L + D P++A+KS +V DF G ++ T+ S +
Sbjct: 435 LKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDFNGKAVGTISTSQL 494
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ PD PEA+KLK W++ EG+ T SI + + + R +++ I
Sbjct: 495 FIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRK------TISQIKDERLGT 548
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + ++ A +S IK D Y AC + CNKKVT+ G G W CE C ++ ++
Sbjct: 549 SEKPDWITVCATVSFIKVDN-FCYTACPIMIGDRQCNKKVTNN-GDGKWRCERCDQSVDD 606
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D +G W++ F E E I+G SA L LK + DD + L+ V +
Sbjct: 607 CDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEILRGVLF 666
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKK 617
+ ++ V ++ +++E+R + TV V+F++ES+FLL+ + K
Sbjct: 667 TKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKH 712
>gi|297800136|ref|XP_002867952.1| hypothetical protein ARALYDRAFT_329623 [Arabidopsis lyrata subsp.
lyrata]
gi|297313788|gb|EFH44211.1| hypothetical protein ARALYDRAFT_329623 [Arabidopsis lyrata subsp.
lyrata]
Length = 801
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/691 (29%), Positives = 352/691 (50%), Gaps = 90/691 (13%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL-------TGNRYMFNASDGKKRL 53
M+ +++ AI I+S + IP V+QV +LK T R+ SDG
Sbjct: 1 MEVSLTAGAIGKIMSGEVTTEADMIP--VLQVTELKQLKAYQDPTRERFRMGLSDGTHLH 58
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSP--------- 104
+ +L ++L+ V G +Q+ ++RL + ++ + T+ + +IV + EV+
Sbjct: 59 QGMLATDLNDLVKQGTLQSGSIVRLTHFGVHVVQTR--RIVIVRELEVIKSNSDIIGHPV 116
Query: 105 ---------ALEMEIKIEVK-SDESGIIFKPKQEDEVKKD----GPGIVLKPKQEMVAKS 150
E IK+ SD+ G+ + E + P + +P +
Sbjct: 117 PGGKHNDQRGAESGIKLNTTGSDQQGLGVRQVNNIETGRSNAAMSPQVDQRPVFGTSSSV 176
Query: 151 AAQILRDQNGNMAPAARLAMTRRVH-----------------------PLV--------- 178
A + P+A ++R+ H P+V
Sbjct: 177 PASTTPSTRVDSNPSAGHGVSRQDHARDPPTSYPRQPQPPPPMYANRGPVVRNEAPPRII 236
Query: 179 ---SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
+L+PY G WTIK RVT+K ++ Y N RGEG VFN +L D DG +I+ T FN A +
Sbjct: 237 PINALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQ 296
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F+D+ +G +Y ISRG+LR A K F + NDYE+ L+ S +++ E A IP+ +F+F
Sbjct: 297 FFDQIVVGNLYLISRGSLRPAQKNFNHLPNDYEIMLDNASTIKQCYEEDAAIPRQQFHFR 356
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I ++ N + ++D+IG+V ++SPT++I RK N PKR + + D + R+V V++W
Sbjct: 357 TIGDIESMENNS-IIDVIGIVSSISPTVTITRK-NGTATPKRSLQLKDMSGRSVEVTMWG 414
Query: 356 ELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
GQ L + D P++A+K+ ++ +F G ++ST+G S + + PD EA KLK W
Sbjct: 415 NFCNAEGQRLQNLCDSGEFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAHKLKDW 474
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSD-RVSLTHITSNPSLGDEKPVFFSIKAYIS 472
+E EGK S+ I SL++ + S D R +++ I EKP + ++ A I
Sbjct: 475 FEREGK--SVPCI-----SLSREFSGSGRVDVRKTISQIKDEKLGTSEKPDWITVSATII 527
Query: 473 LIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDG 525
+K + Y AC + C+KKVTD G G W CE C K+ +EC RYI+ ++ D
Sbjct: 528 YMKVEN-FCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSVDECDYRYILQLQIQDH 585
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+ W++ F E E I+G SA +L +K + D+ ++ +++V + ++ ++ V ++ +
Sbjct: 586 TDLTWVTAFQEAGEEIMGISAKDLYYVKYEHNDEEKFEDIIRKVAFTKYIFKLKVKEETF 645
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++E+R + TV V ++++++++ +L+ + K
Sbjct: 646 SDEQRVKATVVKVDKLNYSSDTRTILDAMDK 676
>gi|224074474|ref|XP_002304377.1| predicted protein [Populus trichocarpa]
gi|222841809|gb|EEE79356.1| predicted protein [Populus trichocarpa]
Length = 701
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 273/478 (57%), Gaps = 21/478 (4%)
Query: 149 KSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGE 208
+SA Q N P AR R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+
Sbjct: 80 QSAYQQPPPMYSNRGPVARNEAPPRIIPITALNPYQGRWTIKARVTAKGELRHYNNTRGD 139
Query: 209 GCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYE 268
G VF+ +L D DG +I+ T FN+ A +FY + + G+VY IS+G L+ A K F +++D E
Sbjct: 140 GKVFSFDLLDSDGGEIRVTCFNQVADQFYHQIEAGRVYLISKGNLKPAQKNFNHLRHDLE 199
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
+ L S ++ + IP+ +F+F PI ++ N + +VD+IGVV +++PT S+ RK
Sbjct: 200 IFLESTSTIQPCFEDDNTIPKQQFHFRPISDVEDMENNS-VVDVIGVVTSIAPTTSLMRK 258
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQ 386
+ E KR + + D + R+V ++LW GQ L D P++A+KS ++ +F
Sbjct: 259 NGTE-TQKRTLQLKDMSGRSVELTLWGNFCNAEGQRLQHICDSGGFPVLAVKSGRISEFS 317
Query: 387 GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRV 446
G ++ T+ S + + PD PEA +LK W++ +G+ T SI +L + SD +
Sbjct: 318 GKAVGTISTSQLFIEPDSPEANRLKEWFDRDGRNTPSLSISRETSTLGR-------SDVM 370
Query: 447 SLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSG 499
+ LG EKP + ++ A + +K D Y AC + CNKKVT+ G G
Sbjct: 371 KTISQIKDERLGTSEKPDWITVPATVIYVKSDN-FCYTACPIMSGERPCNKKVTNN-GDG 428
Query: 500 YW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD 558
W CE C ++ +EC RYI+ ++ D +G +W++ F E E I+G SA +L+ LK + D
Sbjct: 429 KWRCEKCDQSVDECDYRYILQFQIQDHTGISWVTAFQECGEEIMGISAKDLHYLKHEQQD 488
Query: 559 DNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
D + L++V + ++ ++ V ++ +++E+R + TV V+++++S+ LL+ + K
Sbjct: 489 DEGFSKVLRQVLFSRYVFKLKVKEETFSDEQRVKSTVVKSEKVNYSSQSRLLLDMMEK 546
>gi|367036607|ref|XP_003648684.1| hypothetical protein THITE_2106430 [Thielavia terrestris NRRL 8126]
gi|346995945|gb|AEO62348.1| hypothetical protein THITE_2106430 [Thielavia terrestris NRRL 8126]
Length = 610
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 208/632 (32%), Positives = 323/632 (51%), Gaps = 44/632 (6%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLK-LTG-------NRYMFNASDGKKRL 53
++ ++ AI I ++P ++ P V+Q L LK L G RY SD + +
Sbjct: 3 EQQITQGAIDAIYNDPD-RAAKQFPVPVLQCLQLKTLEGKGPGGGAQRYRVILSDIRNYV 61
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVS----PALEME 109
+ +L + + V SG + ++RL Y + + K + +IV EV+S P E
Sbjct: 62 QCMLATQANHVVHSGQLDRGSIVRLKQYQASSV--KGKNVMIVLDLEVISHLGNPEKIGE 119
Query: 110 IK-IEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARL 168
K +EV++ VK + Q+ VA A G+ A
Sbjct: 120 PKAVEVRTQPHSTTIGGAGFYGVKSEPASETKSQVQKQVASRPAAAASGSGGHAAST--- 176
Query: 169 AMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
++P+ +L+PY WTIKVRVTSK ++RT+ A G+G +F+V L DE G +I+AT
Sbjct: 177 -----IYPIEALSPYSNKWTIKVRVTSKSDIRTWHKASGDGKLFSVNLLDETG-EIRATG 230
Query: 229 FNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
FNE +FYD Q G VYYIS +++A KQF + NDYEM ++ +E+A ++++ +
Sbjct: 231 FNEQVDQFYDLLQEGSVYYISTPCKVQLAKKQFSNLANDYEMMFERDTVIEKAEDQSS-V 289
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
PQ +FNF I+EL R V VD+IGV++ V I K+ + KR++T+ D+T
Sbjct: 290 PQLRFNFCNIEEL-RDVEKDATVDVIGVLKEVGEVTEIISKTTQKPYDKRELTLVDDTGF 348
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
+V V++W + AT +A+ I+A+K +V DF G SLS L T+ + PD+PEA
Sbjct: 349 SVRVTIWGKTATEF------DANPESIIALKGTRVSDFGGRSLSLLSSGTMAIDPDIPEA 402
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
KLK WY+S G+ + A+ +LA GA + D + LG + V+F++
Sbjct: 403 HKLKGWYDSTGRNNAFAT----HSNLASVGAAAGRKDDTKTIGQVKSEKLGFDDAVYFTV 458
Query: 468 KAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCD 524
KA I I+ + Y AC++ CNKKVTD +G G W CE C + + RYIM V D
Sbjct: 459 KATIVHIRQEN-FAYPACRSENCNKKVTD-MGDGTWRCEKCNLSHDRPQYRYIMSINVSD 516
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+G+ W++ F++ A I+G +ADEL E+++ GD + R
Sbjct: 517 HTGQMWLNCFDDSARIIMGKTADELVEMQA-TGDKEGLDAAFEAANCRKLTFRCRAKMDT 575
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
Y ++ R R V + AP+D+ E L E I +
Sbjct: 576 YGDQPRVRYQVMSAAPLDYKTEGHKLAELIQQ 607
>gi|392580530|gb|EIW73657.1| hypothetical protein TREMEDRAFT_67478 [Tremella mesenterica DSM
1558]
Length = 596
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 305/581 (52%), Gaps = 40/581 (6%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+RY SDG L+ +L + L+ V S + +I+L + N + + K +I+
Sbjct: 47 DRYRVILSDGTHFLQGMLATQLNPMVDSKELDKNTVIKLKTFVTNVV--QGRKLIIILTL 104
Query: 100 EVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRD-Q 158
EVV P +I +++ + P+ VLKP ++ + + Q
Sbjct: 105 EVV-PWSGEKIGNPTNVEQAAPLAAPQS-----------VLKPSTTANVNASKPVAKQPQ 152
Query: 159 NGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTD 218
AP L +P+ L+PYQ WTIK RVT K +++ + N RGEG +F+V D
Sbjct: 153 KTAAAPMGPL------YPIEGLSPYQNKWTIKARVTQKSDLKHWSNQRGEGKLFSVTFMD 206
Query: 219 EDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
+ G +I+AT FNE +FYD Q GKVY++SR + +A KQF V N+YE+ ++E++
Sbjct: 207 DTG-EIRATGFNETVDQFYDLLQEGKVYFVSRARINIAKKQFNNVNNEYEITFENSTEIQ 265
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
+E+ +PQ K+NF + +LG + EL D+IGVV+ V S+ K+ N+ KRD
Sbjct: 266 PCDDES--VPQIKYNFKSVGDLGD-LQKDELCDVIGVVKEVGELGSVTSKATNKPFAKRD 322
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
I + D++ ++V ++LW + A AD P++A K +KVGDF G SLS +T+
Sbjct: 323 IQLVDQSGQSVRLTLWGKQAETF------QADDEPVIAFKGVKVGDFGGRSLSMFSSATM 376
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
++PD+PEA L+ WY++EG+ + S +++ + + + + LG
Sbjct: 377 ALNPDIPEAHSLRGWYDAEGRSKHFQAYTS--ATVSNSDGQITKPSEIKTIGQAKDEQLG 434
Query: 459 -DEKPVFFSIKAYISLIKPDQAMWYRACKT---CNKKVTDALGSGYWCEGCQKNDEECSL 514
+K +F+ +A +S IK + Y AC CNKKVTD GSG+ CE C K
Sbjct: 435 MSDKTDYFTTQATVSFIK-SETFSYPACANPDGCNKKVTDE-GSGWRCEKCDKTWPSPIH 492
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPH 574
RYI+ V D +G WI+ FNE AE+I+G SA+EL E++ G+D +Q ++ + +
Sbjct: 493 RYILSMNVMDYAGSFWITAFNEVAEQIMGISANELMEMRDN-GNDVEFQRSFQKASGRTY 551
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++ Q +N++ R R R A D+ A+S L+ I+
Sbjct: 552 NFQMMAKQDSFNDQPRVRYQCRRAALPDYPADSAHLVSLIN 592
>gi|384246518|gb|EIE20008.1| hypothetical protein COCSUDRAFT_19010 [Coccomyxa subellipsoidea
C-169]
Length = 476
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 262/486 (53%), Gaps = 18/486 (3%)
Query: 132 KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKV 191
+ GPG+ L+ +++ A+R+A P+ +LNPY +WTI+
Sbjct: 4 RSSGPGVTLEDWHSCRVRASG----------GGASRVA----CQPIHALNPYSNDWTIRA 49
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
++ SK +R + A + VF VE+ D+ GT I+ T++ A KFYD + G+VY RG
Sbjct: 50 KLVSKAPLRHFDKAGQQQAVFGVEVVDDQGTTIEITLWRGLAEKFYDHLEEGRVYIFRRG 109
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
+++ANK +KTV+NDY ++++ SE+E+ + K FV + L Y LVD
Sbjct: 110 QVKLANKNYKTVRNDYTIHMDNGSEIEQCEDSDVSKMTAKLKFVDFERLPMYAGKKTLVD 169
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++G+ V P S++R + + +RD+T+ D+ +TV V+LW A VG +L D
Sbjct: 170 VLGIATAVGPLGSVKRSRDGTELARRDVTLVDQGAKTVVVTLWGSTAEEVGAQLEQQPD- 228
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLG 431
+++I S +V DF G+SLST+ RS V V P+ A L+ W+ES+G+ +G GL
Sbjct: 229 -ALISISSCRVTDFNGVSLSTVTRSGVSVEPEGERADALRRWWESDGRTAPTQHLGEGLA 287
Query: 432 SLAK-NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNK 490
S + +G + L D KP + ++ A ++ I Q+++Y AC N+
Sbjct: 288 SAKRASGGAAELQTFAQLRVGKEELPPADAKPQYHTVIATVANIDSQQSLYYEACPDNNR 347
Query: 491 KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
KV G G++CE Q+ RY+M+A D SG+ +S+FNE+AE ++G SADE+
Sbjct: 348 KVVKQ-GEGWFCEYDQQTYMAMVRRYVMLANCVDASGDCLLSVFNEQAEALLGISADEIA 406
Query: 551 ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
LK + Y+ LK W +LRV QEYN E RQR++V ++ PV + ES+ +
Sbjct: 407 TLKEDETNPGPYEAVLKRAQWSEWVLRVQSRTQEYNGELRQRLSVASLKPVSYVEESRRM 466
Query: 611 LEEISK 616
++ + +
Sbjct: 467 VQALDR 472
>gi|156545235|ref|XP_001604531.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Nasonia vitripennis]
Length = 595
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 323/610 (52%), Gaps = 47/610 (7%)
Query: 20 DSSSDIPEIVVQVLDLKLTGN---RYMFNASDG-KKRLKAILPSNLSSEVISGNIQNKGL 75
D ++ V QV + KL + +Y +DG + IL S L+ + + N+ +
Sbjct: 14 DDGVEVEAPVFQVTNYKLVKSGIPKYRLQINDGCTESTYVILASQLNHLIENRNLSEFSI 73
Query: 76 IRLLDYALNEI--PTKSEKYLI-VTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVK 132
++L Y+ + I P SE+ +I + CE++ P ++ G FK K +V+
Sbjct: 74 MKLNQYSTSMIRGPDNSERKIITIVDCEILVPGHQI-----------GKNFK-KNNTKVE 121
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVR 192
+ P + P + VA+ A Q L + M P P+ +L+PY W IK R
Sbjct: 122 EAVP-VTRIPTNQQVARPAPQ-LNNLVDIMNPIMNSNAPAFTTPIAALSPYHSRWVIKAR 179
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG F+++L DE ++I+ T F + KFYD ++ KVYYIS+
Sbjct: 180 VTNKSQIRTWSNSRGEGKFFSMDLIDE-SSEIRCTAFRDQCDKFYDLIEIDKVYYISKCQ 238
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY-VNGTELVD 311
L+ ANKQF ++NDYEM+L +S++ ET IP +FNFVPI + NG ++D
Sbjct: 239 LKPANKQFNHLRNDYEMSLTYDSQIAICNEETETIPSLQFNFVPISTIETMPTNG--IID 296
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
I+G+V+ S + ++ + + K+D+ V DE + V+LW E A N +
Sbjct: 297 ILGIVKTCSDLQTFTKRLTGQELTKKDVGVVDENNYLINVTLWAEKAQNF------DGSG 350
Query: 372 SPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+P+VAIK K+G+F G +LS L S + V+PD+P A KL+SW+ + G T S+
Sbjct: 351 NPVVAIKGAKIGEFNGGKTLSLLPTSILRVNPDIPTAHKLRSWFSTIGATTESHSLSRTS 410
Query: 431 GSLAKNGARSMYS--DRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--K 486
NG+ +S D L H P + P ++ KA ++LIK + A+ Y++C +
Sbjct: 411 NDGGINGSLLTFSEVDENKLGH----PHM----PCVYTTKATVNLIKAENAL-YKSCPSE 461
Query: 487 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
C KKV D Y CE C K+ + R ++ A + D +G WI+ FN+EAE ++ S
Sbjct: 462 NCKKKVVDQSNGMYRCEKCAKDYPTFTYRLLVNAYLVDWTGNQWIAAFNDEAEILLNGSG 521
Query: 547 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
EL ELK + D ++Y K+ E ++ ++ ++ V Q+ +N+E R + TV +V PV++
Sbjct: 522 PELGELKEK--DFDAYLKKIAETSFKSYIFKIRVKQETFNDETRLKSTVLSVQPVNYKMY 579
Query: 607 SKFLLEEISK 616
LL +I K
Sbjct: 580 LDHLLSKIQK 589
>gi|357113420|ref|XP_003558501.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Brachypodium distachyon]
Length = 645
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 201/660 (30%), Positives = 340/660 (51%), Gaps = 67/660 (10%)
Query: 5 VSPDAISTIL---SNPSPDSSSDIPEIVVQVLDLK-LTGNRYMFNASDGKKRLKAILPSN 60
++P+A++ +L +N P VVQV+DL+ G+R+ SDG A+L
Sbjct: 6 LTPNAVAAVLAGGTNLRP---------VVQVVDLRRANGDRWRACVSDGLTSCSAMLAER 56
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIV-------TKCEVV-SPALEME--- 109
L SG ++ +++L DY L++ S + ++V +C ++ +P + E
Sbjct: 57 LGDLPRSGVVRCGSIVQLDDYVLSD---PSRRIVVVLNMTVLRAECAIIGNPTITSETVS 113
Query: 110 -----IKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAP 164
+++E + + + +G V +P + L Q P
Sbjct: 114 SNQNHLRVEQFNGTRQYGLTAGNPNLTRPNGNVPVFQPSMAANTLNTPTRLSGQTPAFQP 173
Query: 165 AA----RLAMTRRVH-------------PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
A R A + + H P+ +LNPYQG W IK RVT+KG++R Y NA+G
Sbjct: 174 TAQPSYRPAPSYKNHGAIAKNEAPARIIPISTLNPYQGRWAIKGRVTAKGDIRRYHNAKG 233
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
EG VF+ +L D DG +I+ T FN +FY+ ++GKVY +SRG L+ A K + + N +
Sbjct: 234 EGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLKPAQKNYNHLNNXW 293
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRR 327
E+ L+ S V+ ++E + IP +FNF PI E+ N T ++DIIGVV +VSP ++++
Sbjct: 294 EITLDNGSSVDLCLDENSSIPSQRFNFRPISEVEDTAN-TAILDIIGVVISVSPCTTLQK 352
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD--NADKSPIVAIKSLKVGDF 385
K+ E KR I + D + R+V V++W E G +L + P++A+K+ +V DF
Sbjct: 353 KNGME-TQKRVINLKDMSGRSVDVTIWGEFCNREGSQLQEIVECGGFPVLAVKTGRVNDF 411
Query: 386 QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
G S+ T+ S +L+ PD+ EA L+ W++S G+ S SI + + A S R
Sbjct: 412 GGKSVGTISSSQLLIDPDIAEAHSLRQWFDSGGRDASTQSISTDVIPAA-----SRNDIR 466
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSG 499
+++ I +KP + ++KA I K ++ Y AC + CNKKVT
Sbjct: 467 MTIAQIKDEGLGMGDKPDWVTVKASIIFFK-NENFCYTACPNKEGDRQCNKKVTKGTSGL 525
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
++C+ C + EC RY++ ++ D SG W++ F E + ++GCSA +LN K + +D
Sbjct: 526 WFCDKCNREFTECDYRYLLQLQIQDHSGTTWVTAFQESGQDLLGCSAQDLNRFKEE--ED 583
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
+ + + + +LLR+ + ++ Y +E+R + T+ V D A ESK+LL+ IS+ +
Sbjct: 584 PRFAETMLQCLFQEYLLRLKIKEETYGDERRVKNTLVKVERFDPAGESKYLLDSISRSTT 643
>gi|424513270|emb|CCO66854.1| predicted protein [Bathycoccus prasinos]
Length = 587
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 272/471 (57%), Gaps = 33/471 (7%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+RR P+ SLNPYQ WTIK ++ KGN RTY+NA+GEG V VEL D +GT IQAT++
Sbjct: 119 SRRSQPIASLNPYQPQWTIKAKLAVKGNTRTYRNAKGEGKVLTVELVDSEGTAIQATLWR 178
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF---- 286
EA ++ + ++GK+YY+S+G+LR AN+Q+ TV NDYEM+L+ SE+ EA E
Sbjct: 179 EAVERYENVLEVGKLYYVSKGSLRPANRQYTTVNNDYEMSLDGKSEIVEASEEEQLESAA 238
Query: 287 --IPQTKFNFVPIDELGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
I + F FV I +L + VN D+ VV++V+ +++RKS+N + KR++T+ D
Sbjct: 239 KKIFEKAFEFVSIGDLAKRVNSKRATCDVCAVVKSVADLSAVKRKSDNSEIQKRELTLCD 298
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV--- 400
E+ TV ++LWN LAT G++L + + P++ ++S++V +++G+SL TLG+S + +
Sbjct: 299 ESSSTVQLTLWNALATEQGEKLKEMTN--PVIIVRSVRVTEYEGVSLGTLGKSEMQIFEL 356
Query: 401 ---------SPDLPE-AKKLKSWYESEGKGTSMASIGSGLG-SLAKNGARSMYSDRVSLT 449
++PE A + W++ G+ + + G G S+ + G + +R +L
Sbjct: 357 DEAAKASVEEGEVPEKAIETAKWFKENGENATFKTAAEGAGLSVQQRGGKLAPLERQTLV 416
Query: 450 HITSN--PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT----CNKKVTDALGSGYWCE 503
PS D+ + +A I I+ + MWY C T N KV + G ++C
Sbjct: 417 DFQPEEIPSASDKPKMCIVPRASILTIR-EGTMWY--CATPEEGNNAKVEEENGQ-WYCA 472
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
QK C RYIM A++ D SG W+++FN++ E++ G +ADE++E + D
Sbjct: 473 KNQKTYATCKRRYIMGAKIADESGSCWLTLFNDDGEKLFGHTADEMHEFQENDSDKYDAI 532
Query: 564 MKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ + ++ +EYNNE R++V ++ P+DFAAES+ LL ++
Sbjct: 533 LRAAQGAKKSFTFKLKSKVEEYNNENRRKVLTMSMNPIDFAAESRSLLSKM 583
>gi|255074989|ref|XP_002501169.1| hypothetical protein MICPUN_57417 [Micromonas sp. RCC299]
gi|226516432|gb|ACO62427.1| hypothetical protein MICPUN_57417 [Micromonas sp. RCC299]
Length = 525
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 264/447 (59%), Gaps = 18/447 (4%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+LNPY G WT+K ++ KGN+RT++NARGE V +E D +GT IQAT++ +A K+
Sbjct: 75 ALNPYMGTWTVKAKLAVKGNIRTFRNARGESSVCTLEFCDAEGTAIQATLWKDAIAKYDS 134
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP--QTKFNFVP 296
++GKVYY+S+G+LR ANK++ +V N+YEM+L+ E+E + A + Q ++
Sbjct: 135 ILEVGKVYYVSKGSLRPANKKYSSVNNEYEMSLDGRCEIELCADGDADVDKMQRAYDLCK 194
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
ID+L R + G VDI+ VV V SI+RKS+ + +RD+T+ DETKRTVT +LWN
Sbjct: 195 IDQLARKIGGRGTVDILAVVTAVGDLGSIKRKSDGGELQRRDLTLLDETKRTVTCTLWNS 254
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP---DLP-EAKKLKS 412
LA G+ L + +P+VAI+ ++V D+ G+S+STL RS +++ P D+ + L++
Sbjct: 255 LAVEQGESLKNMV--APVVAIRGVRVSDYNGVSVSTLARSELVLEPASADIATKTAALRA 312
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL---GDEKPVFFSI-K 468
WY+++G + G GL S + G S S T P++ E P +
Sbjct: 313 WYDADGATAETVAAGEGLASARRAGDGSGRSLTERTTFNALQPAIVPAATEPPAIGVVGH 372
Query: 469 AYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCE-GCQKNDEECSLRYIMVARVCDG 525
+ I LIKPDQAM+Y + + NKKV G W + K +EC+ RYI+ ++ D
Sbjct: 373 STIVLIKPDQAMYYASNPEEGNNKKVVPT-AEGKWEDPATGKVYDECAYRYIVRMKMSDA 431
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
SG WI++F+E+A ++G A EL+ELK+ + +Y+ K+K + + V +EY
Sbjct: 432 SGGGWINVFHEQAVEMLGIGAGELHELKTN--NPAAYERKIKAAQFSSWNVMVKAKTEEY 489
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLE 612
E R+R+TV D+AAES+ LL+
Sbjct: 490 QGESRRRLTVMKCQKPDYAAESRNLLK 516
>gi|186512039|ref|NP_567576.2| replication factor A1 [Arabidopsis thaliana]
gi|332658747|gb|AEE84147.1| replication factor A1 [Arabidopsis thaliana]
Length = 784
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 267/465 (57%), Gaps = 19/465 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P AR ++ P+ +L+PY G WTIK RVT+K ++ Y N RGEG VFN +L D D
Sbjct: 215 NRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDAD 274
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN A +FYD+ +G +Y ISRG+LR A K F ++NDYE+ L+ S +++
Sbjct: 275 GGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQC 334
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
E A IP+ +F+F I ++ N +VD+IG+V ++SPT++I RK N PKR +
Sbjct: 335 YEEDAAIPRHQFHFRTIGDIESMENNC-IVDVIGIVSSISPTVTITRK-NGTATPKRSLQ 392
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V V++W + GQ L D P++A+K+ ++ +F G ++ST+G S +
Sbjct: 393 LKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQL 452
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ PD EA+KLK+W+E EGK S+ K R +++ I
Sbjct: 453 FIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGSGKVDVRK------TISQIKDEKLGT 506
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + ++ A I +K D Y AC + C+KKVTD G G W CE C K+ +E
Sbjct: 507 SEKPDWITVSATILYLKFDN-FCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSVDE 564
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D + ++ F E E I+G SA +L +K++ D+ ++ +++V +
Sbjct: 565 CDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAF 624
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ ++ V ++ +++E+R + TV V ++++A+++ +L + K
Sbjct: 625 TKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDK 669
>gi|297846122|ref|XP_002890942.1| hypothetical protein ARALYDRAFT_313748 [Arabidopsis lyrata subsp.
lyrata]
gi|297336784|gb|EFH67201.1| hypothetical protein ARALYDRAFT_313748 [Arabidopsis lyrata subsp.
lyrata]
Length = 822
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 267/465 (57%), Gaps = 20/465 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P AR R+ P+ +LNPYQG WTIKVRV+SK +R + N RGEG +F+ +L D D
Sbjct: 251 NRGPVARNEAPPRIIPIAALNPYQGRWTIKVRVSSKAELRRFNNPRGEGKLFSFDLLDAD 310
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN+A +F+D+ +G VY ISRG L+ A K + + NDYE++L+ S ++
Sbjct: 311 GGEIRVTCFNDAVDQFFDQIVVGNVYLISRGNLKPAQKNYNHLPNDYEIHLDSASTIQRC 370
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
++ IP+ +F+F I ++ + + D+IG+V ++ T+ I RK+ E V KR +
Sbjct: 371 EDD-GTIPRNQFHFRNISDI-ENMESNSMTDLIGIVSSIGTTVPIMRKNGTE-VDKRALQ 427
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V V++W + GQ+L + D P++A+K+ ++G+F G +ST+G S
Sbjct: 428 LKDMSGRSVEVTMWGNFCSAEGQQLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGSSQF 487
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
V PD PEA++L+ WYE EG+ + SI + + R + +T I
Sbjct: 488 FVEPDFPEARELRQWYEREGRNANFTSISREFSGVGRQEVRKV------ITQIKDEKLGT 541
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
EKP + ++ A IS +K + Y AC + C+KKVT+ G G W CE C K +E
Sbjct: 542 SEKPDWITVCATISFMKVEN-FCYTACPIMNGDRPCSKKVTNN-GDGTWRCEKCDKCVDE 599
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RYI+ ++ D +G W + F E E I+G SA +L +K + ++ ++ ++ V +
Sbjct: 600 CDYRYILQIQLQDHTGLTWATAFQEAGEEIMGMSAKDLYYVKYENQEEEKFEDIIRSVAF 659
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ ++ + ++ Y++E+R + TV +++A+ ++ +LE + K
Sbjct: 660 TKYIFKLKIKEETYSDEQRVKATVVKAEKLNYASNTRCMLEAMDK 704
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEI-VVQVLDLKLT-GNRYMFNASDGKKRLKAILP 58
M ++ AI+ IL+ + SS+I + V+QV +LK+ NRY F SDG +L
Sbjct: 1 MAVNLTAGAITKILNG---EVSSEIDLMPVLQVTELKMIQSNRYKFLLSDGIHLQAGMLN 57
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKS-----EKYLIVTKCEVV 102
+ L+S VI G+IQ ++RL Y + I + + +IV KC+++
Sbjct: 58 TTLNSLVIQGSIQLGSIVRLTHYVCSLIQGRRIVIIMQLEVIVAKCDII 106
>gi|255546005|ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546518|gb|EEF48016.1| replication factor A 1, rfa1, putative [Ricinus communis]
Length = 670
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 267/466 (57%), Gaps = 27/466 (5%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N APA R+ P+ +LNPYQG W IK RVT+KG++R Y NARG+G VF+ +L D D
Sbjct: 218 NEAPA-------RIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD 270
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN +FYD ++G+VY IS+G+L+ A + F ++N++E+ L S V+
Sbjct: 271 GGEIRVTCFNAVVERFYDVIEVGRVYLISKGSLKPAQRNFNHLKNEWEIFLEATSTVDLC 330
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ IP+ +F F I E+ V ++D+IG+V +V+P++ I RK+ E +R +
Sbjct: 331 PDGDNSIPKQQFTFKTISEI-ENVENNSILDVIGIVISVNPSVPILRKNGME-TQRRILN 388
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R + ++LW + GQ+L + D P++A+K+ KV DF G SL T+ + +
Sbjct: 389 LKDGSGRNIELTLWGDFCNKEGQQLQEIVDSGDFPVLAVKAGKVSDFSGKSLGTISSTQL 448
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSG-LGSLAKNGARSMYSDRVSLTHITSNPSL 457
++PD+PEA LK W++ G+ T+ SI L +KN R S + L
Sbjct: 449 FINPDIPEAHGLKDWFDRGGQHTASVSISRDILPGGSKNEIRKTVSQ-------IKHEGL 501
Query: 458 G-DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDE 510
G ++P + ++ A I+ +K D Y AC + CNKKVT + S + C+ C + +
Sbjct: 502 GRSDRPDWVTVSARITFVKTD-TFCYTACPLMIGDRQCNKKVTSSGNSRWQCDRCNQEFD 560
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
EC RY++ ++ D +G W++ F E E I+G A EL +LK ++ DD + ++
Sbjct: 561 ECDYRYLLQVQIQDHTGLTWVTAFQESGEEILGLPAKELYQLKYEMQDDTKFSDVIRSRL 620
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ L R+ + ++ Y +E+R ++TV V++++E ++LL+ IS+
Sbjct: 621 FQQFLFRLKIKEEMYGDEQRVKITVVKAEKVNYSSEGRYLLDLISQ 666
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIP-EIVVQVLDLKLTGN---RYMFNASDGKKRLKAI 56
M ++P+AIS I + D+ + +VQV+D+K G+ RY F SD A+
Sbjct: 1 MPVNLTPNAISMI-------NGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAM 53
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEM 108
L + L+ V G ++ +++L+DY +E+ ++ K ++V E + P E+
Sbjct: 54 LATQLNDRVKHGFVKKGSVVQLIDYICSEV--QNRKIIVVLNLETIIPECEI 103
>gi|213408425|ref|XP_002174983.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
gi|212003030|gb|EEB08690.1| replication factor-A protein [Schizosaccharomyces japonicus yFS275]
Length = 608
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 328/621 (52%), Gaps = 51/621 (8%)
Query: 16 NPSPDSSSDIPEIVVQVLDLK-LTGN-------RYMFNASDGKKRLKAILPSNLSSEVIS 67
N + D S V+QVL +K L N RY SD + +++L + L+ V+
Sbjct: 14 NTTSDPSEFPANPVLQVLTVKELNSNPTSGAPKRYRVVFSDSQNYAQSMLSTQLNHLVME 73
Query: 68 GNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD-ESGIIFKPK 126
+ ++L + +N + K K LIV V+ P L + KI + E+ + K +
Sbjct: 74 NKLVKGAFVQLTQFTVNVM--KERKILIVLGLNVL-PELGISEKIGNPAGLETVDVLKQQ 130
Query: 127 QEDEVKKDGPGIV----LKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
Q+ K + +A +N A A ++ ++P+ L+P
Sbjct: 131 QQQNASKPPSESSSTSSFYGNRPPPMNNAPAPAAKRN---AVRAGGGLSTIIYPIEGLSP 187
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
YQ WTI+ RVT+K ++ + N RGEG +F+V L DE G +I+AT FNE FYD Q
Sbjct: 188 YQNKWTIRARVTNKSEIKHWHNQRGEGKLFSVNLLDESG-EIRATGFNEQVDAFYDILQE 246
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
G+VY+IS+ + +A KQF VQN+YE+ ++E++++ ++ A +P +FNFV ++E+G+
Sbjct: 247 GQVYFISKCRVNIAKKQFSNVQNEYELMFERDTEIKKSEDQNA-VPMARFNFVTLEEVGK 305
Query: 303 YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
V ++D+IGV+QN+ P I ++ + KRDIT+ D++ + +++W G
Sbjct: 306 -VAKDAIIDVIGVLQNIGPVQQITSRATSRGFDKRDITIVDQSGFEMRMTVW-------G 357
Query: 363 QELLD-NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG--- 418
++ +D + + I+A K +KV DFQG SLS L ST+ PD+PEA LK WY+ +G
Sbjct: 358 KQAIDFSVPEESIIAFKGVKVNDFQGRSLSMLNSSTMTTDPDIPEAHTLKGWYDGQGRAQ 417
Query: 419 ---KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
K +S A++GSG A +R ++ + + E P +FS+KA + I+
Sbjct: 418 DFMKHSSAATVGSGTNRTA---------ERKTVAEVQAQHLGMSETPDYFSLKATVVYIR 468
Query: 476 PDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ + Y AC T CNKKV D GS + CE C K+ E RYIM D +G+ W+++
Sbjct: 469 K-KNISYPACPTPDCNKKVFDQGGS-WHCEKCNKDYEAPHYRYIMTIAAGDHTGQLWLNV 526
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
F++ ++G +ADELN + Q D+N + + + ++VP++ Q + E R R
Sbjct: 527 FDDVGRILMGKTADELNAM--QENDENEFTSVMSDASYVPYVFECRAKQDNFKGEVRVRY 584
Query: 594 TVRAVAPVDFAAESKFLLEEI 614
T +V +D+ ESK L++ I
Sbjct: 585 TAMSVRNIDWKQESKRLVDLI 605
>gi|293331519|ref|NP_001169500.1| uncharacterized protein LOC100383373 [Zea mays]
gi|224029699|gb|ACN33925.1| unknown [Zea mays]
Length = 656
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 206/647 (31%), Positives = 332/647 (51%), Gaps = 72/647 (11%)
Query: 29 VVQVLDLKL--------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLD 80
VVQV+DL+ +G R+ SDG A+ S L SG ++ +++LLD
Sbjct: 24 VVQVVDLRSIAVTGAPGSGPRFRAIISDGVATGHALFASQLCDLARSGVVRRGSVVQLLD 83
Query: 81 YALNEI-PTKSEKYLI-------VTKCEVV-SPALEMEIKIEVKSDESGIIFKPKQEDEV 131
Y +N + PT++ K ++ V +CE++ +PAL E D S + Q +
Sbjct: 84 YIVNNVGPTRNRKAIVILNMEVLVAECEIIGNPALPPE-----SGDSSSNSLRADQFNGA 138
Query: 132 KKDGP------GIVLKP-------KQEMVAKSAAQILRDQNG------NMAPAARLAMTR 172
+G V+KP ++ M S + R + + P+ R A
Sbjct: 139 PPNGSMAGSTLNKVIKPSDNAPVIQRSMTGNSLNMVPRPSDNAQVFQPTVQPSYRPAPKY 198
Query: 173 RVH-------------PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE 219
R H P+ +LNPYQG W IK RVT+KG +R Y NA+G+G VF+ +L D
Sbjct: 199 RSHGTIMKNDAPARIIPIPALNPYQGRWAIKARVTAKGEIRRYHNAKGDGKVFSFDLLDT 258
Query: 220 DGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
DG +I+AT FN +FY+ ++GKVY +SRG L+ A K + + N++E+ L S +E
Sbjct: 259 DGGEIRATCFNALVDRFYEVVEVGKVYVVSRGNLKPAKKDYNHLNNEWEIFLEPQSTIEL 318
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++E + IP +F+F ID++ N +VD+IGVV +V+P+ +I+RK+ E KR I
Sbjct: 319 CLDENSSIPAQRFSFSSIDKIENSENNA-IVDVIGVVTSVNPSTTIQRKNGME-AQKRTI 376
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRST 397
T+ D + R+V +++W + G +L + + P++A+K+ KV D+ G S+ T+ S
Sbjct: 377 TLNDMSGRSVELTMWGDFCNREGSQLQEMVECGAFPVLAVKAGKVNDYSGKSVGTISSSQ 436
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
+ ++PDL EA L+ W++ G+ S SI A S R ++ I +
Sbjct: 437 LHINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSA-----SWNEVRKTVAQIKDDGLG 491
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEE 511
+KP + ++KA IS IK D + Y AC + C KKVT + + C+ C + E
Sbjct: 492 MGDKPDWVTVKAAISFIKTD-SFCYTACPNVIGDRQCGKKVTKSDSGNWLCDKCNQEFPE 550
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RY++ + D +G ++ F + + I+GCSA ELN K D Y L +
Sbjct: 551 CDYRYLLQLNIQDHTGTTSVTAFQDRGQEILGCSARELNIFKEN--KDPRYTDVLINCLY 608
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+L R+ V +++Y + ++ + TV V VD AESKFLL+ IS+ +
Sbjct: 609 QNYLFRLKVKEEQYGDVRQVKNTVAKVERVDPLAESKFLLDSISRFI 655
>gi|242066720|ref|XP_002454649.1| hypothetical protein SORBIDRAFT_04g034780 [Sorghum bicolor]
gi|241934480|gb|EES07625.1| hypothetical protein SORBIDRAFT_04g034780 [Sorghum bicolor]
Length = 652
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 331/639 (51%), Gaps = 60/639 (9%)
Query: 29 VVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
VVQV+DL+ +G R+ SDG A+ S L SG ++ +++LLDY
Sbjct: 24 VVQVVDLRSIAVTGGSGPRFRAIISDGVATGHALFASQLCDLARSGVVRRGSVVQLLDYI 83
Query: 83 LNEI-PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI-IFKPKQEDEVKKDG--PGI 138
+N++ P ++ K +++ EV++ E+ + D + Q + ++G G
Sbjct: 84 VNDVGPHRNRKAIVILNLEVLAAECEIIGNPALPPDSGDSNSMRADQFNGALQNGSIAGT 143
Query: 139 VLKPKQEMVAKSAAQILRDQNGN------------------MAPAARLAMTRRVH----- 175
L K + +A I R GN + P+ R A R H
Sbjct: 144 ALN-KVARPSDNAQVIQRSMAGNSLNMVPRPSENAQVFQPTVQPSYRPAPNYRNHGTIMK 202
Query: 176 --------PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
P+ +LNPYQG W IK RVT+KG +R Y NA+G+G VF+ +L D DG +I+AT
Sbjct: 203 NDAPARIIPISALNPYQGRWAIKGRVTAKGEIRRYHNAKGDGKVFSFDLLDSDGGEIRAT 262
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
FN +FY+ ++GKVY +SRG L+ A K + + N++E+ L S +E ++E + I
Sbjct: 263 CFNTLVDRFYEVVEVGKVYVVSRGNLKPAKKDYNHLNNEWEIFLEFQSTIELCLDENSSI 322
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P +F+F ID++ N +VD+IGVV +V+P+ +I+RK+ E KR IT+ D + R
Sbjct: 323 PAQRFSFSSIDKIEDSENNA-IVDVIGVVTSVNPSTTIQRKNGME-AQKRTITLKDTSGR 380
Query: 348 TVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLP 405
+V +++W + G +L + + P++A+K+ KV D+ G S+ T+ S +L++PDL
Sbjct: 381 SVELTMWGDFCNREGLQLQEMVEYGVFPVLAVKAGKVNDYSGKSVGTISSSQLLINPDLA 440
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
EA L+ W++ G+ S SI A S R ++ I + +KP +
Sbjct: 441 EAHSLRQWFDCGGRDASTQSISRDFTPSA-----SRNEIRKTIAQIKDDGLGMGDKPDWV 495
Query: 466 SIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
++KA ++ IK D Y AC + C KKVT + + C+ C + EC RY++
Sbjct: 496 TVKATVTFIKTD-PFCYTACPNVVGDRQCGKKVTKSDSGNWLCDKCNQEFPECDYRYLLQ 554
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
+ D +G + F E + ++GCSA ELN K +D Y L + +LLR+
Sbjct: 555 LNIQDHTGTTSATAFQEVGQELLGCSARELNMFKEN--EDPRYTAVLIHCLYQNYLLRLK 612
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
V +++Y +E+R + TV V VD +AESKFLL+ IS+ +
Sbjct: 613 VKEEQYGDERRVKNTVVKVERVDPSAESKFLLDSISRFI 651
>gi|19111884|ref|NP_595092.1| DNA replication factor A subunit Ssb1 [Schizosaccharomyces pombe
972h-]
gi|2498845|sp|Q92372.1|RFA1_SCHPO RecName: Full=Replication factor A protein 1; AltName:
Full=Single-stranded DNA-binding protein p68 subunit
gi|1502413|gb|AAC49437.1| single-stranded DNA binding protein p68 subunit
[Schizosaccharomyces pombe]
gi|1814272|gb|AAC49694.1| Rpa1 [Schizosaccharomyces pombe]
gi|4049512|emb|CAA22533.1| DNA replication factor A subunit Ssb1 [Schizosaccharomyces pombe]
Length = 609
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 322/609 (52%), Gaps = 30/609 (4%)
Query: 18 SPDSSSDIPEIVVQVLDLK-LTGN-------RYMFNASDGKKRLKAILPSNLSSEVISGN 69
+ D+SS P ++QVL +K L N RY SD +++L + L+ V
Sbjct: 15 TSDASSFPPNPILQVLTVKELNSNPTSGAPKRYRVVLSDSINYAQSMLSTQLNHLVAENK 74
Query: 70 IQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQED 129
+Q ++L + +N + K K LIV V++ M+ E+ + +Q +
Sbjct: 75 LQKGAFVQLTQFTVNVM--KERKILIVLGLNVLTELGVMDKIGNPAGLETVDALRQQQNE 132
Query: 130 EVKKDGP--GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNW 187
+ P GI +AA PAA +++ ++P+ L+PYQ W
Sbjct: 133 QNNASAPRTGISTSTNSFYGNNAAATAPAPPPMMKKPAAPNSLSTIIYPIEGLSPYQNKW 192
Query: 188 TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYY 247
TI+ RVT+K ++ + N RGEG +F+V L DE G +I+AT FN+ FYD Q G VYY
Sbjct: 193 TIRARVTNKSEVKHWHNQRGEGKLFSVNLLDESG-EIRATGFNDQVDAFYDILQEGSVYY 251
Query: 248 ISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGT 307
ISR + +A KQ+ VQN+YE+ ++E+ +A ++TA +P KF+FV + E+G V
Sbjct: 252 ISRCRVNIAKKQYTNVQNEYELMFERDTEIRKAEDQTA-VPVAKFSFVSLQEVGD-VAKD 309
Query: 308 ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD 367
++D+IGV+QNV P I ++ + KRDIT+ D+T + V+LW + A
Sbjct: 310 AVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWGKTAIEF------ 363
Query: 368 NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
+ + I+A K +KV DFQG SLS L ST+ V PD+ E+ LK WY+ +G+G A
Sbjct: 364 SVSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQESHLLKGWYDGQGRGQEFAKHS 423
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT 487
+L+ G RS ++R ++ + + E P +FS+K I I+ + + Y AC
Sbjct: 424 VISSTLSTTG-RS--AERKNIAEVQAEHLGMSETPDYFSLKGTIVYIRK-KNVSYPACPA 479
Query: 488 --CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS 545
CNKKV D GS + CE C K + RYI+ V D +G+ W+++F++ + I+ +
Sbjct: 480 ADCNKKVFDQGGS-WRCEKCNKEYDAPQYRYIITIAVGDHTGQLWLNVFDDVGKLIMHKT 538
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
ADELN+L Q D+N++ + E ++P++ + Q + E R R TV ++ +D+
Sbjct: 539 ADELNDL--QENDENAFMNCMAEACYMPYIFQCRAKQDNFKGEMRVRYTVMSINQMDWKE 596
Query: 606 ESKFLLEEI 614
ESK L+ I
Sbjct: 597 ESKRLINFI 605
>gi|413924352|gb|AFW64284.1| hypothetical protein ZEAMMB73_597518 [Zea mays]
Length = 761
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 206/647 (31%), Positives = 332/647 (51%), Gaps = 72/647 (11%)
Query: 29 VVQVLDLKL--------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLD 80
VVQV+DL+ +G R+ SDG A+ S L SG ++ +++LLD
Sbjct: 129 VVQVVDLRSIAVTGAPGSGPRFRAIISDGVATGHALFASQLCDLARSGVVRRGSVVQLLD 188
Query: 81 YALNEI-PTKSEKYLI-------VTKCEVV-SPALEMEIKIEVKSDESGIIFKPKQEDEV 131
Y +N + PT++ K ++ V +CE++ +PAL E D S + Q +
Sbjct: 189 YIVNNVGPTRNRKAIVILNMEVLVAECEIIGNPALPPE-----SGDSSSNSLRADQFNGA 243
Query: 132 KKDGP------GIVLKP-------KQEMVAKSAAQILRDQNG------NMAPAARLAMTR 172
+G V+KP ++ M S + R + + P+ R A
Sbjct: 244 PPNGSMAGSTLNKVIKPSDNAPVIQRSMTGNSLNMVPRPSDNAQVFQPTVQPSYRPAPKY 303
Query: 173 RVH-------------PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE 219
R H P+ +LNPYQG W IK RVT+KG +R Y NA+G+G VF+ +L D
Sbjct: 304 RSHGTIMKNDAPARIIPIPALNPYQGRWAIKARVTAKGEIRRYHNAKGDGKVFSFDLLDT 363
Query: 220 DGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
DG +I+AT FN +FY+ ++GKVY +SRG L+ A K + + N++E+ L S +E
Sbjct: 364 DGGEIRATCFNALVDRFYEVVEVGKVYVVSRGNLKPAKKDYNHLNNEWEIFLEPQSTIEL 423
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++E + IP +F+F ID++ N +VD+IGVV +V+P+ +I+RK+ E KR I
Sbjct: 424 CLDENSSIPAQRFSFSSIDKIENSENNA-IVDVIGVVTSVNPSTTIQRKNGME-AQKRTI 481
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRST 397
T+ D + R+V +++W + G +L + + P++A+K+ KV D+ G S+ T+ S
Sbjct: 482 TLNDMSGRSVELTMWGDFCNREGSQLQEMVECGAFPVLAVKAGKVNDYSGKSVGTISSSQ 541
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
+ ++PDL EA L+ W++ G+ S SI A S R ++ I +
Sbjct: 542 LHINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSA-----SWNEVRKTVAQIKDDGLG 596
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEE 511
+KP + ++KA IS IK D + Y AC + C KKVT + + C+ C + E
Sbjct: 597 MGDKPDWVTVKAAISFIKTD-SFCYTACPNVIGDRQCGKKVTKSDSGNWLCDKCNQEFPE 655
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RY++ + D +G ++ F + + I+GCSA ELN K D Y L +
Sbjct: 656 CDYRYLLQLNIQDHTGTTSVTAFQDRGQEILGCSARELNIFKEN--KDPRYTDVLINCLY 713
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+L R+ V +++Y + ++ + TV V VD AESKFLL+ IS+ +
Sbjct: 714 QNYLFRLKVKEEQYGDVRQVKNTVAKVERVDPLAESKFLLDSISRFI 760
>gi|115449015|ref|NP_001048287.1| Os02g0776800 [Oryza sativa Japonica Group]
gi|46805512|dbj|BAD16963.1| replication protein A 70kDa [Oryza sativa Japonica Group]
gi|46806154|dbj|BAD17384.1| replication protein A 70kDa [Oryza sativa Japonica Group]
gi|113537818|dbj|BAF10201.1| Os02g0776800 [Oryza sativa Japonica Group]
gi|125583873|gb|EAZ24804.1| hypothetical protein OsJ_08582 [Oryza sativa Japonica Group]
gi|215701492|dbj|BAG92916.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715207|dbj|BAG94958.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 656
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 193/649 (29%), Positives = 332/649 (51%), Gaps = 82/649 (12%)
Query: 29 VVQVLDLK---------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLL 79
V+Q+++L+ G R+ SDG A+ + LS SG ++ +++L
Sbjct: 24 VLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQLSDHARSGALRRGSIVQLS 83
Query: 80 DYALNEIPTKS-----EKYLIVTKCEVVSPALEME---------IKIE----------VK 115
+Y +NE+ + ++V++CE++ + ++E +
Sbjct: 84 EYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSETGSPIPNPTRVEQFNGAPQYGLMA 143
Query: 116 SDESGIIFKPKQ-----EDEVKKDGPGIVLKPKQEMVA---------------KSAAQIL 155
+ S KP ++ + + +P ++ K+ I+
Sbjct: 144 GNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPAPNYKNHGAIM 203
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
+ N APA R+ P+ +LNPYQG W IK RVT+KG++R Y NA+G+G VF+ +
Sbjct: 204 K----NEAPA-------RIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFD 252
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L D DG +I+ T FN +FY+ ++GKVY +SRG LR A K + + N++E+ L S
Sbjct: 253 LLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWEILLENGS 312
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
V+ +E + IP +F+F PI+E+ N ++DIIGVV +V+P +I+RK+ E
Sbjct: 313 TVDLCPDENSSIPTQRFDFRPINEIEDAQNNA-ILDIIGVVTSVNPCTTIQRKNGME-TQ 370
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTL 393
KR + + D + R+V V++W + G +L ++ P++A+K+ KV DF G S+ T+
Sbjct: 371 KRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGKSVGTI 430
Query: 394 GRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS 453
+ + ++PD EA L+ W++S G+ S SI + A S R ++ I
Sbjct: 431 SSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGA-----SRNEIRKTVAQIKD 485
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQK 507
+KP + ++KA + K +++ +Y AC + CNKKVT + + C+ C +
Sbjct: 486 EGLGMGDKPDWITVKATVIFFK-NESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDR 544
Query: 508 NDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLK 567
EEC RY++ ++ D SG AW++ F E + ++GCSA ELN LK + +D + +
Sbjct: 545 EFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKER--EDPRFADTML 602
Query: 568 EVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ +LLR+ V ++ Y +E++ + T V VD + ESKFLL+ ISK
Sbjct: 603 NCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISK 651
>gi|380815388|gb|AFE79568.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
gi|383420567|gb|AFH33497.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
gi|384943584|gb|AFI35397.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
Length = 616
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 316/612 (51%), Gaps = 41/612 (6%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ +
Sbjct: 24 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERLSSNCICQIHRFI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKP 142
+N + + +I+ + EV+ A + +KI + +P+ P KP
Sbjct: 84 VNTL-KDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGHGQPQAAPPASAGSPAASSKP 142
Query: 143 KQEMVAKSAAQILRDQNG-----NMAPAARLAMTR-----RVHPLVSLNPYQGNWTIKVR 192
+Q+ + A + G A L+ T +V P+ SL PYQ WTI R
Sbjct: 143 QQQHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICAR 202
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GT
Sbjct: 203 VTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGT 261
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L++ANKQF V+NDYEM N + V ++ +P +F+F ID+L + LVDI
Sbjct: 262 LKIANKQFTAVKNDYEMTFNNETSVMPCEDDR-HLPTVQFDFTGIDDL-ESKSKDSLVDI 319
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IG+ ++ I +SNN V KR+I + D + + VT +LW E A + +
Sbjct: 320 IGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQ 373
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSG 429
P++AIK +V DF G SLS L ST++V+PD+PEA KL+ W+++EG+ G S++ + SG
Sbjct: 374 PVLAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDAEGQALDGVSISDLKSG 433
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-- 487
+++Y + + N GD KP +FS A + ++ + M Y+AC T
Sbjct: 434 GVGGGNTNWKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQD 485
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C R I+ + D W++ F E AE I+G +A
Sbjct: 486 CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAA 545
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
L ELK + ++ +++ + + + RV V + YN+E R + TV V PVD+
Sbjct: 546 YLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYG 603
Query: 608 KFLLEEISKKVS 619
+ L+ I + S
Sbjct: 604 RRLVLSIRRSAS 615
>gi|125541337|gb|EAY87732.1| hypothetical protein OsI_09147 [Oryza sativa Indica Group]
Length = 658
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 194/640 (30%), Positives = 330/640 (51%), Gaps = 74/640 (11%)
Query: 30 VQVLDLKLT-GNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPT 88
VQV +T G R+ SDG A+ + LS SG ++ +++L +Y +N++
Sbjct: 35 VQVNGAGVTRGERFRAVVSDGTAASSALFAAQLSDHARSGALRRGSIVQLSEYVINDVGP 94
Query: 89 KS-----EKYLIVTKCEVVSPALEME---------IKIE----------VKSDESGIIFK 124
+ ++V++CE++ + ++E + + S K
Sbjct: 95 RRIIVILNLEVLVSECEIIGNPTALSETGSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTK 154
Query: 125 PKQ-----EDEVKKDGPGIVLKPKQEMVA---------------KSAAQILRDQNGNMAP 164
P ++ + + +P ++ K+ I++ N AP
Sbjct: 155 PSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPAPNYKNHGAIMK----NEAP 210
Query: 165 AARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
A R+ P+ +LNPYQG W IK RVT+KG++R Y NA+G+G VF+ +L D DG +I
Sbjct: 211 A-------RIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFDLLDSDGGEI 263
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
+ T FN +FY+ ++GKVY +SRG LR A K + + N++E+ L S V+ +E
Sbjct: 264 RVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWEILLENGSTVDLCPDED 323
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
+ IP +F+F PI+E+ N ++DIIGVV +V+P +I+RK+ E KR + + D
Sbjct: 324 SSIPTQRFDFRPINEIEDAQNNA-ILDIIGVVTSVNPCTTIQRKNGME-TQKRTMNLKDM 381
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
+ R+V V++W +L G +L ++ P++A+K+ KV DF G S+ T+ + + ++P
Sbjct: 382 SGRSVEVTMWGDLCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGKSVGTISSTQLFINP 441
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
D EA L+ W++S G+ S SI + A S R ++ I +KP
Sbjct: 442 DSAEAHSLRQWFDSGGRDASTQSISRDITPGA-----SRNEIRKTVAQIKDEGLGMGDKP 496
Query: 463 VFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
+ ++KA + K +++ +Y AC + CNKKVT + + C+ C + EEC RY
Sbjct: 497 DWITVKATVIFFK-NESFFYTACPNMIGDRQCNKKVTKSTTGNWTCDKCDREFEECDYRY 555
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
++ ++ D SG AW++ F E + ++GCSA ELN LK + +D + + + +LL
Sbjct: 556 LLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKER--EDPRFADTMLNCLFQEYLL 613
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ V ++ Y +E++ + T V VD + ESKFLL+ ISK
Sbjct: 614 RLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISK 653
>gi|390462862|ref|XP_002747872.2| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Callithrix jacchus]
Length = 672
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 322/620 (51%), Gaps = 57/620 (9%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L++ V G + + + ++ +
Sbjct: 80 MLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNTLVEQGQLASNCVCQVNRFI 139
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKI--EVKSDES---------------GIIFKP 125
+N + + +I+ + EV+ A + +KI V +E KP
Sbjct: 140 VNTL-KDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGHGQQQVAPPPVPAASPASSKP 198
Query: 126 KQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQG 185
+ ++ G G L PK A A++ G + +V P+ SL PYQ
Sbjct: 199 QPQN--GSSGVGSTL-PK----AYGASKTFGKAGGPSLSSTSGGTQAKVVPIASLTPYQS 251
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
WTI RVT+K +RT+ N+RGEG +F++EL DE +I+AT FNE KF+ ++ KV
Sbjct: 252 KWTICARVTNKSQIRTWSNSRGEGKLFSLELVDES-AEIRATAFNEQVDKFFPLIEVNKV 310
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
YY S+GTL++ANKQF V+NDYEM N + V ++ +P +F+F ID L +
Sbjct: 311 YYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQFDFTGIDNL-ESKS 368
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
LVDIIG+ ++ I +SNN V KR+I + D + + VT +LW E A
Sbjct: 369 KDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF---- 424
Query: 366 LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTS 422
+ + P++AIK +V DF G SLS L ST++V+PD+PEA KL+ W++SEG+ G S
Sbjct: 425 --DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGVS 482
Query: 423 MASIGS-GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMW 481
++ + S GLG + N +++Y + + N GD KP +FS A + ++ + M
Sbjct: 483 ISDLKSGGLGGSSTN-WKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM- 533
Query: 482 YRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
Y+AC T CNKKV D Y CE C R I+ + D W++ F E AE
Sbjct: 534 YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPSFKYRMILSVNIADFQENQWVTCFQESAE 593
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
I+G SA L ELK + ++ +++ + + + RV V + YN+E R + TV V
Sbjct: 594 AILGQSAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVK 651
Query: 600 PVDFAAESKFLLEEISKKVS 619
PVD+ + L++ I + S
Sbjct: 652 PVDYREYGRRLVQSIRRNAS 671
>gi|71022145|ref|XP_761303.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
gi|46097797|gb|EAK83030.1| hypothetical protein UM05156.1 [Ustilago maydis 521]
Length = 623
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 331/643 (51%), Gaps = 62/643 (9%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL----------TGNRYMFNASDGKKRLK 54
+S AI+ ++ P SSS + V Q+L +K G+RY SDG +
Sbjct: 6 LSQGAIAQMIQTSDPASSS-VQNPVCQILSIKKIQASATSAANVGDRYRIILSDGINYAQ 64
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
A+L S S V SG ++ L+R+ +A N + ++ + LI+ +VV E +
Sbjct: 65 AMLASQKRSMVESGELEKNCLVRVTQFASNSV--QNRRILILLDLDVVHKPTEDRLGHPT 122
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVL-------------KPKQEMVAKSAAQILRDQNGN 161
+E+ K E VK++G L P + K+A G
Sbjct: 123 NVEEA-----VKAEGGVKQEGGANALGNSALGNNSAGRTTPATSAMGKAA--------GG 169
Query: 162 MAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDG 221
+ ++P+ L+PYQ WTIK RVTSK ++R + N RGEG +F+V L D+ G
Sbjct: 170 RPGGGSVHAGMPIYPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLDDSG 229
Query: 222 TQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV 281
+I+AT FN+A +FY Q VY IS+ + +A KQF +QN+YE+ ++E+EE
Sbjct: 230 -EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECT 288
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+ T +P+ K+ FV I+EL V + D+IG++ + I K++ V KR++T+
Sbjct: 289 DATD-VPEVKYEFVRINEL-ESVEANQTCDVIGILDSYGELSEIVSKASQRPVQKRELTL 346
Query: 342 ADETKRTVTVSLWNELA----TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST 397
D+ R+V ++LW + A TN G D+ P++A K +KVGDF G SLS ST
Sbjct: 347 VDQGNRSVKLTLWGKTAETFPTNAG------VDEKPVLAFKGVKVGDFGGRSLSMFSSST 400
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSM---ASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
+L++PD+ E+ L+ WY+++G + G G G++ GA + ++R ++ + +
Sbjct: 401 MLINPDITESHVLRGWYDNDGAHAQFQPYTNGGVGGGAMGGGGAGANMAERRTIVQV-KD 459
Query: 455 PSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
+LG EKP +F+++A + IK + ++Y AC + CNKKV + + CE C ++
Sbjct: 460 ENLGMSEKPDYFNVRATVVYIKQEN-LYYTACASEGCNKKVNLDHENNWRCEKCDRSYAT 518
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
RYI+ V D +G+ W+S FNE+A ++IG SA EL++L+ + ++ + L
Sbjct: 519 PEYRYILSTNVADATGQMWLSGFNEDATQLIGMSAGELHKLREE--SESEFSAALHRAAN 576
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ +N+ R R T+ APVDFA L++ I
Sbjct: 577 RMYMFNCRAKMDTFNDTARVRYTISRAAPVDFAKAGMELVDAI 619
>gi|320583428|gb|EFW97641.1| Subunit of heterotrimeric Replication Protein A (RPA) [Ogataea
parapolymorpha DL-1]
Length = 604
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 321/594 (54%), Gaps = 43/594 (7%)
Query: 38 TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEK-YLIV 96
TG R +DG+ + + + + I N + ++++ Y + PT + K +L+V
Sbjct: 34 TGERLRLMLNDGQYAINGVFKPSEAQNAIE-NFKRYCILKITQYEIT--PTNNGKIFLVV 90
Query: 97 TKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILR 156
+ EVV + EIK E D K ED G L P+ + S A +
Sbjct: 91 DRAEVVEQGEKSEIKFESLDD----YLKEHPEDNNLLKGQ---LPPRDSTMTPSPAATMP 143
Query: 157 DQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
+ + P + ++ + L+PYQ +WTIK RV+ K +M+ + N RG+G +FNV L
Sbjct: 144 KKTVSKPPPK----YQNLYSIDQLSPYQNSWTIKARVSFKSDMKHWSNQRGDGKLFNVNL 199
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
DE G +I+AT FN+ A KF+D + KV+YIS+ ++++A QF +++ YE+ ++++
Sbjct: 200 LDETG-EIRATAFNQVAEKFWDLLEENKVFYISKASMQMAKPQFSNLKHQYELQFDKDTI 258
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+E ++ + +P+ F+FVP+D++ NG ++D+IG+++ V I KS + +
Sbjct: 259 IE-PCDDDSDVPKLHFDFVPLDQVQNLENGA-VIDVIGILKEVKDKQEIVAKSTGKPFDR 316
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
RDI + D+++ V + LWN+ A + +VA K +V DF G SLS + +
Sbjct: 317 RDIVLVDKSQFAVNIGLWNKHAREF------DVPVGSVVAFKGCRVQDFGGKSLSLIPAA 370
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT---- 452
T++V+PD+ EA K+K WY+++G S SI GS +GA S+ S + L T
Sbjct: 371 TIVVNPDIEEAYKIKGWYDAQGSHQSFKSIALESGS---SGATSLTSKQSILERKTIKQV 427
Query: 453 SNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKND 509
+ LG +KP +FS+KA IS IK D Y AC++ CNKK+ + + CE C N
Sbjct: 428 QDEKLGLKDKPDYFSLKATISFIKTDN-FCYPACRSEGCNKKLLEQDNGTWRCEKCNINH 486
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD-------DNSY 562
E + RYI+ V D +G+ W+++F+E+A +++G SA EL +LK+ D +N+
Sbjct: 487 PEPNYRYILTVSVVDETGQMWLTLFDEQAAQLLGLSAAELLKLKNDAEDPSIESVGENAL 546
Query: 563 QMKLKE-VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ + E +++ LLRV Y + R R TV ++A VD+ AE + L+E +S
Sbjct: 547 KNFINENISFKEVLLRVRGKVDSYQGQDRARFTVASLAKVDYLAECEALVEILS 600
>gi|68472689|ref|XP_719663.1| hypothetical protein CaO19.9640 [Candida albicans SC5314]
gi|68472948|ref|XP_719539.1| hypothetical protein CaO19.2093 [Candida albicans SC5314]
gi|46441361|gb|EAL00659.1| hypothetical protein CaO19.2093 [Candida albicans SC5314]
gi|46441490|gb|EAL00787.1| hypothetical protein CaO19.9640 [Candida albicans SC5314]
gi|238881852|gb|EEQ45490.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 624
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/648 (29%), Positives = 337/648 (52%), Gaps = 68/648 (10%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILP 58
+S A+ + S DS IP +++Q+ ++K ++ +DG ++
Sbjct: 6 LSKGALKQVFSKEGHDSVQ-IP-MILQITNIKAFDVSPSDSKKFRILVNDGVYSTHGLID 63
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEME----IKIE- 113
+ S + + N Q ++++ ++ I S+ + ++ EV++P E I I+
Sbjct: 64 ESCSEYIKNNNCQRYAIVQVNAFS---IFATSKHFFVIKNFEVLAPTSEKSPNNIIPIDT 120
Query: 114 --VKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMT 171
++ E + K+ + ++ P + P +A+S + G +A ++ A T
Sbjct: 121 YFLEHPEENYLTVMKKSESRDRESPVPGVTPP---LAQSTNSFKSEVGGGVAAQSKPAGT 177
Query: 172 -RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
R+V P+ +++PYQ NWTIK RV+ KG++RT+ N++GEG VF L DE +I+A+ FN
Sbjct: 178 HRKVSPIETISPYQNNWTIKARVSYKGDLRTWSNSKGEGKVFGFNLLDE-SDEIKASAFN 236
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
E A + + + GKVYYIS+ + A K+F T+ + YE+ ++++E+ E +E+ +P+
Sbjct: 237 ETAERAHKLLEEGKVYYISKARVAAARKKFNTLSHPYELTFDKDTEITECFDESD-VPKL 295
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
FNFV +D++ + + ++D++G ++ V P I KS ++ +R+I V DET +
Sbjct: 296 NFNFVKLDQV-QNLEANAIIDVLGALKTVFPPFQITAKSTGKVFDRRNILVVDETGFGIE 354
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
+ LWN AT+ N ++ +VA+K KV D+ G +LS +++ +P PE+ KL
Sbjct: 355 LGLWNNTATDF------NIEEGTVVAVKGCKVSDYDGRTLSLTQAGSIIPNPGTPESFKL 408
Query: 411 KSWYESEGKGTSMASI-----GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
K WY++ G S S+ GSG + S R+S+ S EKP +F
Sbjct: 409 KGWYDNIGIHESFKSLKIDNAGSGGDKI---------SQRISINQALEEHSGSTEKPDYF 459
Query: 466 SIKAYISLIKPDQAMWYRAC-------------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
SIKA ++ KP+ Y AC + CNKK+ G W CE C K EE
Sbjct: 460 SIKASVTFCKPEN-FAYPACPNLVQNADATRPAQVCNKKLVFQDNDGTWRCERCAKTYEE 518
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL---NELKSQLGDDNSYQMKLKE 568
+ RY++ V D +G W+++FN++AE+++G A EL E KS++ + KE
Sbjct: 519 PTWRYVLSCSVTDSTGHMWVTLFNDQAEKLLGIDATELVKKKEQKSEVANQIMNNTLFKE 578
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ LRV Q+ YN+E + R + + +D+A+ES+FL++++ +
Sbjct: 579 FS-----LRVKAKQETYNDELKTRYSAAGINELDYASESQFLIKKLDQ 621
>gi|387539408|gb|AFJ70331.1| replication protein A 70 kDa DNA-binding subunit [Macaca mulatta]
Length = 616
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 315/612 (51%), Gaps = 41/612 (6%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ +
Sbjct: 24 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERLSSNCICQIHRFI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKP 142
+N + + +I+ + EV+ A + +KI + +P+ P KP
Sbjct: 84 VNTL-KDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGHGQPQAAPPASAGSPAASSKP 142
Query: 143 KQEMVAKSAAQILRDQNG-----NMAPAARLAMTR-----RVHPLVSLNPYQGNWTIKVR 192
+Q+ + A + G A L+ T +V P+ SL PYQ WTI R
Sbjct: 143 QQQHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICAR 202
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GT
Sbjct: 203 VTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGT 261
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L++ANKQF V+NDYEM N + V ++ +P +F+F ID+L + LVDI
Sbjct: 262 LKIANKQFTAVKNDYEMTFNNETSVMPCEDDR-HLPTVQFDFTGIDDL-ESKSKDSLVDI 319
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IG+ ++ I +SNN V KR+I + D + + VT +LW E A + +
Sbjct: 320 IGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQ 373
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSG 429
P++AIK +V DF G SLS L ST++ +PD+PEA KL+ W+++EG+ G S++ + SG
Sbjct: 374 PVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSG 433
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-- 487
+++Y + + N GD KP +FS A + ++ + M Y+AC T
Sbjct: 434 GVGGGNTNWKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQD 485
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C R I+ + D W++ F E AE I+G +A
Sbjct: 486 CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAA 545
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
L ELK + ++ +++ + + + RV V + YN+E R + TV V PVD+
Sbjct: 546 YLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYG 603
Query: 608 KFLLEEISKKVS 619
+ L+ I + S
Sbjct: 604 RRLVLSIRRSAS 615
>gi|51512372|gb|AAU05383.1| replication protein A 70 kDa subunit [Ustilago maydis]
Length = 623
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 331/643 (51%), Gaps = 62/643 (9%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL----------TGNRYMFNASDGKKRLK 54
+S AI+ ++ P SSS + V Q+L +K G+RY SDG +
Sbjct: 6 LSQGAIAQMIQTSDPASSS-VQNPVCQILSIKKIQASATSAANVGDRYRIILSDGINYAQ 64
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
A+L S S V SG ++ L+R+ +A N + ++ + LI+ +VV E +
Sbjct: 65 AMLASQKRSMVESGELEKNCLVRVTQFASNSV--QNRRILILLDLDVVHKPTEDRLGHPT 122
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVL-------------KPKQEMVAKSAAQILRDQNGN 161
+E+ K E VK++G L P + K+A G
Sbjct: 123 NVEEA-----VKAEGGVKQEGGANALGNSALGNNSAGRTTPATSAMGKAA--------GG 169
Query: 162 MAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDG 221
+ ++P+ L+PYQ WTIK RVTSK ++R + N RGEG +F+V L D+ G
Sbjct: 170 RPGGGSVHAGMPIYPIEGLSPYQNRWTIKARVTSKFDIRHWSNQRGEGKLFSVNLLDDSG 229
Query: 222 TQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV 281
+I+AT FN+A +FY Q VY IS+ + +A KQF +QN+YE+ ++E+EE
Sbjct: 230 -EIKATGFNDAVDRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECT 288
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+ T +P+ K+ FV I+EL V + D+IG++ + I K++ V KR++T+
Sbjct: 289 DATD-VPEVKYEFVRINEL-ESVEANQTCDVIGILDSYGELSEIVSKASQRPVQKRELTL 346
Query: 342 ADETKRTVTVSLWNELA----TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST 397
D+ R+V ++LW + A TN G D+ P++A K +KVGDF G SLS ST
Sbjct: 347 VDQGNRSVKLTLWGKTAETFPTNAG------VDEKPVLAFKGVKVGDFGGRSLSMFSSST 400
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSM---ASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
+L++PD+ E+ L+ WY+++G + G G G++ GA + ++R ++ + +
Sbjct: 401 MLINPDITESHVLRGWYDNDGAHAQFQPYTNGGVGGGAMGGGGAGANMAERRTIVQV-KD 459
Query: 455 PSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
+LG EKP +F+++A + IK + ++Y AC + CNKKV + + CE C ++
Sbjct: 460 ENLGMSEKPDYFNVRATVVYIKQEN-LYYTACASEGCNKKVNLDHENNWRCEKCDRSYAT 518
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
RYI+ V D +G+ W+S FNE+A ++IG SA EL++L+ + ++ + L
Sbjct: 519 PEYRYILSTNVADATGQMWLSGFNEDATQLIGMSAGELHKLREE--SESEFSAALHRAAN 576
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ +N+ R R T+ APVDFA L++ I
Sbjct: 577 RMYMFNCRAKMDTFNDTARVRYTISRAAPVDFAKAGMELVDAI 619
>gi|403275301|ref|XP_003929392.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Saimiri boliviensis boliviensis]
Length = 560
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 255/452 (56%), Gaps = 24/452 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 127 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 185
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 186 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 244
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ + I +SNN V KR+I + D + + VT +
Sbjct: 245 DFTGIDDLENKSKDS-LVDIIGICKSYEDAIKITVRSNNREVAKRNIYLMDTSGKVVTAT 303
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++++PD+PEA KL+
Sbjct: 304 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIILNPDIPEAYKLRG 357
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 358 WFDSEGQALDGVSISDLKSGGLGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 410
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 411 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 469
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 470 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 527
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
E R + TV V PVD+ + L++ I + S
Sbjct: 528 ESRIKATVMDVKPVDYREYGRRLVQSIRRNAS 559
>gi|13536993|dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa Japonica Group]
Length = 654
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 327/640 (51%), Gaps = 74/640 (11%)
Query: 30 VQVLDLKLT-GNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPT 88
VQV +T G R+ SDG A+ + LS SG ++ +++L +Y +NE+
Sbjct: 31 VQVNGAGVTRGERFRAVVSDGTAASSALFAAQLSDHARSGALRRGSIVQLSEYVINEVGP 90
Query: 89 KS-----EKYLIVTKCEVVSPALEME---------IKIE----------VKSDESGIIFK 124
+ ++V++CE++ + ++E + + S K
Sbjct: 91 RRIIVILNLEVLVSECEIIGNPTALSETGSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTK 150
Query: 125 PKQ-----EDEVKKDGPGIVLKPKQEMVA---------------KSAAQILRDQNGNMAP 164
P ++ + + +P ++ K+ I++ N AP
Sbjct: 151 PSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPAPNYKNHGAIMK----NEAP 206
Query: 165 AARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
A R+ P+ +LNPYQG W IK RVT+KG++R Y NA+G+G VF+ +L D DG +I
Sbjct: 207 A-------RIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFDLLDSDGGEI 259
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
+ T FN +FY+ ++GKVY +SRG LR A K + + N++E+ L S V+ +E
Sbjct: 260 RVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWEILLENGSTVDLCPDEN 319
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
+ IP +F+F PI+E+ N ++DIIGVV +V+P +I+RK+ E KR + + D
Sbjct: 320 SSIPTQRFDFRPINEIEDAQNNA-ILDIIGVVTSVNPCTTIQRKNGME-TQKRTMNLKDM 377
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
+ R+V V++W + G +L ++ P++A+K+ KV DF G S+ T+ + ++P
Sbjct: 378 SGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGKSVGTISSTQFFINP 437
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
D EA L+ W++S G+ SI + A S R ++ I +KP
Sbjct: 438 DSAEAHSLRQWFDSGGRDAFTQSISRDITPGA-----SRNEIRKTVAQIKDEGLGMGDKP 492
Query: 463 VFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
+ ++KA + K +++ +Y AC + CNKKVT + + C+ C + EEC RY
Sbjct: 493 DWITVKATVIFFK-NESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRY 551
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
++ ++ D SG AW++ F E + ++GCSA ELN LK + +D + + + +LL
Sbjct: 552 LLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKER--EDPRFADTMLNCLFQEYLL 609
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ V ++ Y +E++ + T V VD + ESKFLL+ ISK
Sbjct: 610 RLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISK 649
>gi|332257541|ref|XP_003277864.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Nomascus leucogenys]
Length = 616
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 316/609 (51%), Gaps = 41/609 (6%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ Y
Sbjct: 24 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNLLVEQEQLSSNCVCQINRYI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKP 142
+N + + +I+ + EV+ A + +KI + + +P+ P +P
Sbjct: 84 VNTL-KDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGLGQPQVAPPAPAASPAASSRP 142
Query: 143 KQEMVAKSAAQILRDQNG-----NMAPAARLAMTR-----RVHPLVSLNPYQGNWTIKVR 192
+ + + A + G A L+ T +V P+ SL PYQ WTI R
Sbjct: 143 QPQNGSSGAGPTVSKAYGASKTFGKAAGPSLSHTSAGTQSKVVPIASLTPYQSKWTICAR 202
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GT
Sbjct: 203 VTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGT 261
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L++ANKQF V+NDYEM N + V ++ +P +F+F ID+L + LVDI
Sbjct: 262 LKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQFDFTGIDDLENKSKDS-LVDI 319
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IG+ ++ I +SNN V KR+I + D + + VT +LW E A + +
Sbjct: 320 IGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQ 373
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSG 429
P++AIK +V DF G SLS L ST++V+PD+PEA KL+ W+++EG+ G S++ + SG
Sbjct: 374 PVLAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDAEGQALDGVSISDLKSG 433
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-- 487
A +++Y + + N GD KP +FS A + ++ + M Y+AC T
Sbjct: 434 GVGGANTNWKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQD 485
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C R I+ + D W++ F E AE I+G +A
Sbjct: 486 CNKKVIDQQNGLYRCEKCDTEFPSFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAA 545
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
L ELK + ++ +++ + + + RV V + YN+E R + TV V PVD+
Sbjct: 546 YLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYG 603
Query: 608 KFLLEEISK 616
+ L+ I +
Sbjct: 604 RRLVMSIRR 612
>gi|402898208|ref|XP_003912118.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Papio
anubis]
Length = 616
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 315/612 (51%), Gaps = 41/612 (6%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ +
Sbjct: 24 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERLSSNCVCQIHRFI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKP 142
+N + + +I+ + EV+ A + +KI + +P+ P KP
Sbjct: 84 VNTL-KDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGHGQPQAAPPASAGSPAASSKP 142
Query: 143 KQEMVAKSAAQILRDQNG-----NMAPAARLAMTR-----RVHPLVSLNPYQGNWTIKVR 192
+Q+ + A + G A L+ T +V P+ SL PYQ WTI R
Sbjct: 143 QQQHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICAR 202
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GT
Sbjct: 203 VTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGT 261
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L++ANKQF V+NDYEM N + V ++ +P +F+F ID+L + LVDI
Sbjct: 262 LKIANKQFTAVKNDYEMTFNNETSVMPCEDDR-HLPTVQFDFTGIDDL-ESKSKDSLVDI 319
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IG+ ++ I +SNN V KR+I + D + + VT +LW E A + +
Sbjct: 320 IGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQ 373
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSG 429
P++AIK +V DF G SLS L ST++ +PD+PEA KL+ W+++EG+ G S++ + SG
Sbjct: 374 PVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSG 433
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-- 487
+++Y + + N GD KP +FS A + ++ + M Y+AC T
Sbjct: 434 GVGGGNTNWKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQD 485
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C R I+ + D W++ F E AE I+G +A
Sbjct: 486 CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAA 545
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
L ELK + ++ +++ + + + RV V + YN+E R + TV V PVD+
Sbjct: 546 YLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYG 603
Query: 608 KFLLEEISKKVS 619
+ L+ I + S
Sbjct: 604 RRLVLSIRRSAS 615
>gi|313666982|gb|ADR72941.1| replication protein A1 [Brachionus ibericus]
Length = 611
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 312/614 (50%), Gaps = 34/614 (5%)
Query: 23 SDIPEIVVQVLDLKLTGN------RYMFNASDGK-KRLKAILPSNLSSEVISGNIQNKGL 75
+++ + ++Q++ +K N RY DG+ + IL + +S V S ++ +
Sbjct: 16 NNVSDPILQIIQMKNIQNNMDGMTRYKVTLYDGETQHTFGILATQKNSLVESNQLRIGSV 75
Query: 76 IRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPK---QEDEVK 132
I+L +YA N + K I+ +++ + E+ K + I +P Q + ++
Sbjct: 76 IKLEEYAANVLSKDPPKVAII----LLNFEILGEMDPNSKPQATNAISQPSKQIQNENIE 131
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVR 192
+ P K +K + Q+ N P ++ + SLNPYQ W IK R
Sbjct: 132 PNKPNNQTNTKS-FFSKKENDFEKAQSTN-PPGTFNGF--KIFGISSLNPYQNKWAIKAR 187
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K N+RTY NARGEG +FNVEL D G +I+A FNE KFY+ Q+ +VYYIS+
Sbjct: 188 VTNKSNIRTYSNARGEGKLFNVELIDSTG-EIRANGFNEQVDKFYEMLQIDQVYYISKAN 246
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L+ ANKQ+ + NDYEM N N V + ET +P+ N V I E+ + + VD+
Sbjct: 247 LKTANKQYCKLDNDYEMTFN-NETVIQPCEETDDLPRINLNLVKIKEISNHA-ANDFVDV 304
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IGVV++V +I KS N + KR++++ D ++ +T +LW + A E D +D
Sbjct: 305 IGVVRSVGDVTTIITKSTNRELKKRELSIVDNSECAITATLWGKQA-----EDYDPSDSY 359
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS-GLG 431
P++ +K K+GD+ G +LS + V ++PDLPEA +K W+E G + + + S G+
Sbjct: 360 PVILLKGAKIGDYNGKTLSVASTTVVQINPDLPEAHTVKGWFEQGGSESDIQDLSSQGMA 419
Query: 432 SLAKN--GARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KT 487
+ N G S +S+ L + +K +FS KAY+ K D +M Y AC +
Sbjct: 420 AAGANSGGPISGHSNWKFLDQLKDEKLGMGDKADYFSTKAYVLYAKKDNSM-YMACPGEN 478
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKK+ D Y CE C +N R I+ + D + W + F E AE I+G +
Sbjct: 479 CNKKIFDQNDGTYRCEKCARNYPNFKWRMILNINLADFAESNWATCFQETAETILGIGTE 538
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
EL ELK+ +D + E + ++ + YN+E+R +V+ V PVD+A
Sbjct: 539 ELGELKN--SNDPKFDEIFSECAFKEFNFKLRAKMETYNDERRVKVSAVTVEPVDYAQSG 596
Query: 608 KFLLEEISKKVSHQ 621
+ +L++I + Q
Sbjct: 597 RRILQKIKQFAKEQ 610
>gi|91094635|ref|XP_970093.1| PREDICTED: similar to replication protein A 70 kDa DNA-binding
subunit [Tribolium castaneum]
gi|270016445|gb|EFA12891.1| hypothetical protein TcasGA2_TC004405 [Tribolium castaneum]
Length = 591
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 315/607 (51%), Gaps = 54/607 (8%)
Query: 24 DIPEIVVQVLDLKLTGNR------YMFNASDGKKRLK---AILPSNLSSEVISGNIQNKG 74
++ E +VQVL K +R Y ASDG + LP E S
Sbjct: 18 EVEEPLVQVLVSKKISSRSAETERYRIWASDGDYSITYGILTLPPGKPVEDFS------- 70
Query: 75 LIRLLDYALNEIPTKS--EKYLIVTKCEVVSPALEMEIKI--EVKSDESGIIFKPKQEDE 130
+I+L + +EI +K L++ E+V+P ++ +KI V + I + +
Sbjct: 71 IIKLKKFVKSEISNAKGPQKILLIIDSEIVTPGHQIGVKIGEPVTLTDEIIASETSSTPK 130
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIK 190
V P V +PK E + + ++ TR ++ + +L PY W IK
Sbjct: 131 VSTSEPP-VKQPKSEQ--------------STSLNQSISETRVLNQINALTPYHNKWVIK 175
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
RVT+K +MRT+ N+RGEG +F+ +L D+ G +I+ T F + A K+++ Q+ KVYYIS+
Sbjct: 176 ARVTNKSDMRTWSNSRGEGKLFSFDLMDDSG-EIRCTAFRDMADKYFNYLQVDKVYYISK 234
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
L+ ANKQF T++N+YEM + + +EE + + +PQ K+NFVPI L G LV
Sbjct: 235 CQLKAANKQFNTLKNEYEMTIGNETIIEECLTDDGHVPQVKYNFVPISALAEKEVGN-LV 293
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IG+ + S + KS N + KR+IT+ D++K ++ ++LW A + +A
Sbjct: 294 DVIGICKEASEVQTFTSKSTNRELRKREITLVDQSKTSIALTLWGSQADSF------DAT 347
Query: 371 KSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+P+V IK KVG+F G +LSTL S + ++PD+PE ++K WY+SEG+ +M ++
Sbjct: 348 NNPVVVIKGAKVGEFGGGKNLSTLMSSQIKLNPDIPECHRIKGWYDSEGQYDAMTNLSER 407
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-- 487
+G G S + +SL + EK +F +KA I L++ + A+ Y+AC T
Sbjct: 408 VG-----GVGSFQTAWMSLKEVQDKGLGHSEKGDYFQVKATILLVRSENAL-YKACPTDD 461
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C + R ++ + D SG W+S+F+ EAE+I+G +A
Sbjct: 462 CNKKVVDLENGMYRCEKCCREFPNFKYRLLVSMNIGDFSGNQWVSVFSSEAEKILGKTAQ 521
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
E+ + D + + + + + + YN+E+R ++ V V PV++ +
Sbjct: 522 EIG--LTMRDDSEAGTAIFQAANFKQFIFKCRAKMENYNDEQRLKIVVVKVDPVNYEEYN 579
Query: 608 KFLLEEI 614
+L E+I
Sbjct: 580 GYLCEQI 586
>gi|164657638|ref|XP_001729945.1| hypothetical protein MGL_2931 [Malassezia globosa CBS 7966]
gi|159103839|gb|EDP42731.1| hypothetical protein MGL_2931 [Malassezia globosa CBS 7966]
Length = 567
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 307/583 (52%), Gaps = 46/583 (7%)
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEI----K 111
+L + L V +G++ ++R+ + N + ++ K LI+ EV+SPAL I
Sbjct: 1 MLATQLKPLVENGSLDRNVVVRVTQFTSNTV--QNRKILILLNLEVISPALPHRIGNPQN 58
Query: 112 IEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKS-AAQILRDQNGNMAPAARLAM 170
IE + + K V P +KP +A S AQ L +G+ A +
Sbjct: 59 IESAKSSADASVETKA---VPGATPHADVKPPAPAMAPSLGAQALSGSHGDSARVGSRGV 115
Query: 171 TRR-----VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
+ V+P+ +L+PYQ WTIK RVT K ++R + NARG+G +F+V L DE G +I+
Sbjct: 116 AKSSSGMPVYPIDALSPYQNKWTIKARVTLKTDIRHWSNARGDGKLFSVNLLDESG-EIR 174
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETA 285
AT FN+A +FY Q KVY+IS+ + +A KQF T+ N+YE++L SE+EE E
Sbjct: 175 ATAFNDAVDRFYPVLQENKVYFISKAKVTIAKKQFSTLPNEYEISLESGSEIEECA-EAG 233
Query: 286 FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
+P+ K+NFV ID+L V + D+I ++ + I K+ + KRD+T+ D +
Sbjct: 234 DVPEVKYNFVSIDQL-TTVEPNQTTDVITILDGYTDVSEILSKATQRPIKKRDLTLIDSS 292
Query: 346 KRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLP 405
+V ++LW A N + + ++ P++A K +KV DF G SLS ST+ ++PD+P
Sbjct: 293 GMSVRMTLWGSQAENFEKTIA--GEEKPVIAFKGVKVSDFGGRSLSMFSSSTMSINPDIP 350
Query: 406 EAKKLKSWYESEGKGTSMASIGSGL----------GSLAKNGARSMYSDRVSLTHITSNP 455
E+ L+ WY++EG + S G+ L G+L N R++ +
Sbjct: 351 ESHGLRGWYDNEGNSAHIRSYGATLDGTTASALNQGALRANEFRTLAQ--------VKDE 402
Query: 456 SLGD--EKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEE 511
SLG E+ +F+ +A + I+P+ ++Y AC + CNKKV + G+ CE C ++
Sbjct: 403 SLGTSFERADYFNARAVVLYIRPN-TLYYTACPGQDCNKKVIEE-SDGWRCEKCDRSYPA 460
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
RYI A + D SG+ WIS FNE ++G +ADEL+ ++++ ++ ++ L V
Sbjct: 461 PVRRYIFSANIADYSGQIWISGFNEVGVALLGMTADELDSIRNE--NEGEFKAVLTRVIG 518
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
Q+ +N+ R R TV + P++FA L+++I
Sbjct: 519 RVMDFHCRAKQETFNDTNRVRYTVTQIQPLNFAKAGHELVDKI 561
>gi|388856821|emb|CCF49608.1| probable Replication factor-A protein 1 [Ustilago hordei]
Length = 627
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 201/649 (30%), Positives = 333/649 (51%), Gaps = 70/649 (10%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL----------TGNRYMFNASDGKKRLK 54
+S AI+ ++ P +S P + Q+L +K G+RY SDG +
Sbjct: 6 LSQGAIAQMIQTADPANSVQNP--ICQILSIKKIQASATSASNVGDRYRIILSDGVHYAQ 63
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
++L S S V SG ++ L+R+ YA N + ++ + LI+ L++E+ +
Sbjct: 64 SMLASQKRSMVESGELEKHCLVRISQYASNSV--QNRRILIL---------LDLEVAHKP 112
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSA---AQILRDQNGNMAPAARLAMT 171
+D G P D+ K G+ KQE A +A + + + G PA A
Sbjct: 113 TADRLG---SPTNVDDAIKSEGGV----KQEGGAGNALGNSNLGNNSAGRTTPATSAAGA 165
Query: 172 RR------------------VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ ++P+ L+PYQ WTIK RVTSK ++R + N RGEG +F+
Sbjct: 166 GKIGGGAGRPGGSSVNAGMPIYPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFS 225
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
V L D+ G +I+AT FN+ +FY + VY IS+ + +A KQF +QN+YE+
Sbjct: 226 VNLLDDSG-EIKATGFNDTVDRFYSLLKENHVYLISKAKVNIAKKQFSNLQNEYEITFEN 284
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
++E+EE + T +P+ K+ FV I+EL V + D+IGV+ + I K++
Sbjct: 285 STEIEECTDATD-VPEVKYEFVRINEL-ESVEPNQTCDVIGVLDSYGELSEIVSKASQRP 342
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNA--DKSPIVAIKSLKVGDFQGISLS 391
V KR++T+ D+ ++V ++LW + A + +NA D+ P++A K +KVGDF G SLS
Sbjct: 343 VQKRELTLVDQGGKSVRLTLWGKNA----ETFPNNAGVDEKPVIAFKGVKVGDFGGRSLS 398
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM---YSDRVSL 448
ST+L++PD+ E+ L+ WY+++G + + GA ++R ++
Sbjct: 399 MFSSSTMLINPDITESHVLRGWYDNDGARAQFEAFSNAGVGGGALGAAGAGGNMAERRTI 458
Query: 449 THITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGC 505
+ + +LG EKP +F+I+A + IK + ++Y AC + CNKKVT + + CE C
Sbjct: 459 AQV-KDENLGMTEKPDYFNIRATVVYIKQEN-LYYTACPSDGCNKKVTLDHENNWRCEKC 516
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK 565
++ E RYI+ V D +G+ W+S FNE+A ++IG SA EL++L+ ++ Y
Sbjct: 517 DRSYEAPEYRYILSTNVADATGQIWLSGFNEDATKLIGMSAGELHQLREN--SESEYSAA 574
Query: 566 LKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
L +L +N++ R R T+ APVDFA L++ I
Sbjct: 575 LHRAANRMYLFNCRAKMDTFNDQTRVRYTISRSAPVDFAKAGAELVDAI 623
>gi|355568066|gb|EHH24347.1| Replication protein A 70 kDa DNA-binding subunit, partial [Macaca
mulatta]
Length = 605
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 315/612 (51%), Gaps = 41/612 (6%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ +
Sbjct: 13 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERLSSNCICQIHRFI 72
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKP 142
+N + + +I+ + EV+ A + +KI + +P+ P KP
Sbjct: 73 VNTL-KDGRRVVILMELEVLKSAEVVGVKIGNPVPYNEGHGQPQAAPPASAGSPAASSKP 131
Query: 143 KQEMVAKSAAQILRDQNG-----NMAPAARLAMTR-----RVHPLVSLNPYQGNWTIKVR 192
+Q+ + A + G A L+ T +V P+ SL PYQ WTI R
Sbjct: 132 QQQHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICAR 191
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GT
Sbjct: 192 VTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGT 250
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L++ANKQF V+ND+EM N + V ++ +P +F+F ID+L + LVDI
Sbjct: 251 LKIANKQFTAVKNDFEMTFNNETSVMPCEDDR-HLPTVQFDFTGIDDL-ESKSKDSLVDI 308
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IG+ ++ I +SNN V KR+I + D + + VT +LW E A + +
Sbjct: 309 IGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQ 362
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSG 429
P++AIK +V DF G SLS L ST++ +PD+PEA KL+ W+++EG+ G S++ + SG
Sbjct: 363 PVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSG 422
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-- 487
+++Y + + N GD KP +FS A + ++ + M Y+AC T
Sbjct: 423 GVGGGNTNWKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQD 474
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C R I+ + D W++ F E AE I+G +A
Sbjct: 475 CNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAA 534
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
L ELK + ++ +++ + + + RV V + YN+E R + TV V PVD+
Sbjct: 535 YLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYG 592
Query: 608 KFLLEEISKKVS 619
+ L+ I + S
Sbjct: 593 RRLVLSIRRSAS 604
>gi|344230771|gb|EGV62656.1| hypothetical protein CANTEDRAFT_115222 [Candida tenuis ATCC 10573]
Length = 591
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 306/597 (51%), Gaps = 48/597 (8%)
Query: 28 IVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIP 87
+VQV++L+ + DGK + +L +L ++ Q +I++L ++ E P
Sbjct: 29 FIVQVINLRHYEGKSRVILYDGKYNMHGLLDKSLVDKLEGQGFQKTSVIKILAHSCFE-P 87
Query: 88 TKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMV 147
K Y ++ EVV P E E +K E + QE+ K K+E
Sbjct: 88 EKF--YTLIDDAEVVLPKYESEAHDTIKIAE--YFNQNPQEN---------FFKSKKEQP 134
Query: 148 AKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
+AA + AA +R+ + SL+PYQ NW IK RV+ KG++RT+ NA+G
Sbjct: 135 QPAAAP------SKQSSAADEFQGQRISSIESLSPYQNNWVIKARVSFKGDLRTWHNAKG 188
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
G +FNV D D +I+AT FNE A K Y+ Q GKVYYIS+ ++ A QF + + Y
Sbjct: 189 SGKLFNVNFLD-DSDEIRATAFNELAEKMYETLQEGKVYYISKARIQAAKPQFSRLSHPY 247
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRR 327
E++L+ ++ VEE + +P+ KFNF ++++ T ++D++GV++ V P I
Sbjct: 248 ELSLDRDTIVEECFSNNGNVPKLKFNFTKLNQIQSAEPNT-VIDVVGVLREVKPAFQITS 306
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG 387
KS + +RDI + D++ ++TV LWN A + N + ++A K K+ DF G
Sbjct: 307 KSTGKPFDRRDIDIVDDSNFSITVGLWNATAIDF------NLSEGTVIAFKGCKIQDFGG 360
Query: 388 ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMY-SDRV 446
SL+ ++L +PD PEA +LK WY+++G + ++ A N + Y +R
Sbjct: 361 RSLTLTQTGSILPNPDAPEAYQLKGWYDNQGSNETFQTLK------ADNAGSANYIKNRK 414
Query: 447 SLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--------KTCNKKVTDALGS 498
++ + E+P FFS+KA I+ K + Y AC CN+K+ D G
Sbjct: 415 TIAQVKEENLGAQEQPDFFSVKATINFFKT-ETFCYPACVNKQEASNNLCNRKIIDQ-GD 472
Query: 499 GYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLG 557
G W CE C N E + RYI+ + D + + W ++F++EA +I G SA+EL LK
Sbjct: 473 GTWRCEKCDINYSEATYRYILNCSIMDATEQLWATLFDQEASKIFGVSANELLVLKE--S 530
Query: 558 DDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ ++ ++ VT R+ Q YN E R R AV +DFAAE FL++E+
Sbjct: 531 NEAEFKKVVEAVTMKEFSFRLKARQDSYNGESRIRYQTMAVYDIDFAAECDFLVKEL 587
>gi|392595534|gb|EIW84857.1| replication factor-A protein 1 [Coniophora puteana RWD-64-598 SS2]
Length = 598
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 260/458 (56%), Gaps = 27/458 (5%)
Query: 163 APAARLAMT--RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
+ AAR T R V P+ L+PYQ NWTIK RVT K +R + NARGEG +FNV L DE
Sbjct: 152 SAAARQTQTKGRNVFPIEGLSPYQNNWTIKARVTQKSEVRNWSNARGEGKLFNVTLMDES 211
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+AT FN + Y + + GKVYY+S+ + +A K+F +QNDYE++L +N+EVEE
Sbjct: 212 G-EIRATGFNAVVDELYPKLEEGKVYYVSKARVNLAKKKFSNIQNDYELSLEKNTEVEEC 270
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ +T +P K+NF+ + EL D+IG+V+ P I K+ N +PKR++T
Sbjct: 271 L-DTTNLPTIKYNFISLGELESLAKDVN-CDVIGIVKEAGPLSEITSKT-NRTIPKRELT 327
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
+ D+++ +V ++LW + Q L +A+ P++A K +KVGD+ G SLS + S + +
Sbjct: 328 IVDKSQFSVRMTLWGK------QAELYSAEDQPVIAFKGVKVGDYGGRSLSMMSSSLMSI 381
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT----SNPS 456
SPD+PEA L+ WY+ G + + S + A G +R L HI+ S
Sbjct: 382 SPDIPEAHALRGWYDGIGNEKTFTAQSSAVPLGASFGG----FNRSELRHISDVKDSQLG 437
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSL 514
+GD K FFS +A I IK + + Y AC + CNKKVTD +G G+ CE C K E
Sbjct: 438 MGD-KADFFSTRASIMHIKTEN-IAYPACANQGCNKKVTD-VGDGWRCEKCDKTFERPEY 494
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPH 574
RYI+ V D SG+AW+ FN+ E I G SADE+ E+K+ D+ Y + + T V
Sbjct: 495 RYIVSIAVADWSGQAWLQGFNDAGEAIFGKSADEVMEIKN--CDEQEYNAVMAQATGVTF 552
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLE 612
Q YN+ R R + + VD+ E+K L+E
Sbjct: 553 NFGCRAKQDTYNDNTRVRYGISKILSVDYREEAKHLVE 590
>gi|448119751|ref|XP_004203808.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
gi|359384676|emb|CCE78211.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
Length = 629
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 315/615 (51%), Gaps = 48/615 (7%)
Query: 28 IVVQVLDLKLT------GN-----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLI 76
IVVQV ++K+ GN +Y +DG+ L ++ S + + +I
Sbjct: 32 IVVQVSNIKIIDQSPDGGNGESSIKYRVLLNDGQYSLHGLITSECVPYCEANGFRKTSVI 91
Query: 77 RLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQE--DEVKKD 134
+ DY L ++K++++ V +I + S ++ P ++ + VK++
Sbjct: 92 SVQDYNL----VTTQKHIMIINSLEVKHQTSTKITGNITSCDAYYAEHPDEDFLELVKRN 147
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVT 194
G + V + + + NG A + R+V+ + L+PYQ +WTIK RV+
Sbjct: 148 QIGDSFSDHK--VQPPSNRSVSPSNGTAPKGASMFQQRQVNAIEQLSPYQNHWTIKARVS 205
Query: 195 SKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLR 254
KG++R + NARGEG +FNV DE +I+AT FN+ A KFY + + GKVYY+S+ ++
Sbjct: 206 YKGDIRKWSNARGEGKLFNVNFLDE-SDEIRATAFNDLADKFYQQLEEGKVYYVSKARIQ 264
Query: 255 VANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
+ QF + + YE+ L+ ++ +EE +T+ +P+ FNF ++++ +VD+IG
Sbjct: 265 QSKPQFSHLSHPYELALDRDTVIEECF-DTSNVPKIHFNFTKLNDI-ENAEANSIVDVIG 322
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
V++ V+P I KS + +R+IT+ D++ +TV LWN A + + +
Sbjct: 323 VLKEVNPVFQITAKSTGKPFDRRNITIVDDSNVAITVGLWNTSAVDF------TVSEGSV 376
Query: 375 VAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLA 434
+A K K+ DF G SL+ +++V+PD PEA LK W++++G + S+ + S
Sbjct: 377 IAFKGCKIQDFAGRSLTLTHAGSMMVNPDTPEAYSLKGWFDNKGVHENFKSLKNE-NSTT 435
Query: 435 KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--------- 485
KN +S R S+ EKP FF+IKA I+ K + Y AC
Sbjct: 436 KNA----FSSRKSILQAQEENLGMSEKPDFFNIKATINFFKTEN-FCYPACNNVLDSGSQ 490
Query: 486 ---KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
TCN+KV + + CE C N E RYI+ V D SG+ WI++F++EA+++
Sbjct: 491 QLSNTCNRKVVEQSDGTWRCEKCDMNFAEPHYRYILNCSVMDSSGQLWITLFDQEAQKLF 550
Query: 543 GCSADELNELKSQL--GDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
G A EL +LK Q G+++ +Q + +VT R+ Q YN R R V +++
Sbjct: 551 GTPAGELLKLKEQQMNGENSDFQKIINDVTMKEFNFRLKARQDSYNGVLRVRYQVLSISD 610
Query: 601 VDFAAESKFLLEEIS 615
VDF AE + L+ ++S
Sbjct: 611 VDFNAECEHLITQLS 625
>gi|443719869|gb|ELU09821.1| hypothetical protein CAPTEDRAFT_172916 [Capitella teleta]
Length = 608
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 318/616 (51%), Gaps = 44/616 (7%)
Query: 23 SDIPEIVVQVLDLKLT-----GNRYMFNASDGK-KRLKAILPSNLSSEVISGNIQNKGLI 76
S + ++Q LD K +R+ SDG A+L + L+ +V +G ++ +I
Sbjct: 17 SKVESPILQCLDWKKISSQQGADRFRLLLSDGVCSHSSAMLATQLNDKVTNGELEPNSVI 76
Query: 77 RLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGP 136
+L Y N I + + +I+ + V++ ++ ++ + +K + E K + P
Sbjct: 77 KLDKYLCNTI-NGNRRVMILLEITVIAKGAQVGSRLGNPTP-----YKLGESKEAKVEQP 130
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTR-----------RVHPLVSLNPYQG 185
V KP Q ++ + ++ N + + + RVHP+ SLNPYQ
Sbjct: 131 --VAKPVQNSISNNQQNKPQNSFYNNSSSKPFVAAQPSINGPGDSPVRVHPISSLNPYQN 188
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
WTIKVRVTSK +RT+ N+RGEG +F++ D+ G +I+AT F + KFYD ++ KV
Sbjct: 189 RWTIKVRVTSKSQIRTWSNSRGEGKLFSMTFMDDSG-EIKATAFKDQVDKFYDMIEMNKV 247
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
+++ +GTL+ A+K++ T NDYEM N ++E+ ++T+ +P FNFV I L + V
Sbjct: 248 FFVKKGTLKTADKRYNTTDNDYEMTFNNDTEIIPCDDDTS-LPTINFNFVEIGNL-QSVE 305
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
VD++GVV++V+ +I K N+ + KR++ + D + V ++LW A N
Sbjct: 306 PNSNVDVLGVVKSVAEVSTITTKQTNKELKKRELELVDRGQVLVRLTLWGLEAENF---- 361
Query: 366 LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS 425
N+ +P+VA K+++V DF G SLS S ++++PD+P+A +L+ WY+SEG+ +
Sbjct: 362 --NSMNNPVVAAKNVRVSDFGGRSLSCGSSSQLVLNPDIPQAHQLRGWYDSEGRNADFNA 419
Query: 426 IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC 485
S G+ S ++ S + S EK +F+ K I ++ + M Y AC
Sbjct: 420 YSSEAA-----GSGSHSTNWKSFGDVKSQNLGTGEKGDYFTAKGTIVYLRKENCM-YMAC 473
Query: 486 --KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG 543
CNKKV D Y CE CQK R I+ A V D S W++ F E AE ++G
Sbjct: 474 PQADCNKKVVDQANGYYRCEKCQKEFPNFKWRMILSANVADFSDNQWVTCFQESAENVLG 533
Query: 544 CSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDF 603
SADEL +L+S+ ++ ++ E + +++ + + YN E R +V PV
Sbjct: 534 ISADELGKLRSE--NEAAFDKVFDESVFKSYVMTLRAKMETYNEETRLKVICLKATPVVA 591
Query: 604 AAESKFLLEEISKKVS 619
K L+ EI + +S
Sbjct: 592 EDYHKKLISEIEQMLS 607
>gi|443926858|gb|ELU45414.1| damaged DNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1077
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 306/609 (50%), Gaps = 51/609 (8%)
Query: 18 SPDSSSDIPEIVVQVLDLKL-----TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQN 72
+PD+ D + V+Q+L +K + +RY SDG+ +++L + L+ S +
Sbjct: 504 TPDAIGDF-QPVLQLLSIKKVSSGGSSDRYRLVYSDGEYHCQSMLATKLNDYFTSQDFTP 562
Query: 73 KGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVK 132
K +IRL T+C M +K++ S++ G + +
Sbjct: 563 KCIIRL------------------TRCA-------MNLKVDDYSEKIGNPVNFDKAENQA 597
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARL--AMTRRVHPLVSLNPYQGNWTIK 190
GP + A PA A +HP+ +L+PY WTI+
Sbjct: 598 GAGPSAMDVDPAPAAPAPAPPKAVPSGPTSGPATNTLPAGFAPLHPIEALSPYSNKWTIR 657
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
RVT K ++RT+ N RGEG +F+V L DE G +I+AT FNE Y + + GKVY+ S+
Sbjct: 658 ARVTQKSDIRTWSNQRGEGKLFSVNLMDETG-EIRATGFNEVVDNLYSKLEEGKVYWFSK 716
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
+++A KQF + NDYE+ L +E +E+A +P+ +FNF + +L V +V
Sbjct: 717 ARVQLAKKQFSNLSNDYEIALERQTEAIPCEDESA-VPKVQFNFTELSQLDG-VEKDAMV 774
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D++GVV V P +I KS + V KRD+TV D++ +V +++W + A A+
Sbjct: 775 DVLGVVTEVKPIETINVKSTGKTVSKRDVTVVDKSGSSVRMTIWGKQAETF------QAE 828
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+P++A K +KVGDF G +LS + ST+ PD PEA L+ WY SEG + S +G
Sbjct: 829 NNPVIAFKGVKVGDFGGRTLSLVSSSTMTFHPDFPEAHALQGWYSSEGHSQTFKSQSTGG 888
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLG---DEKPVFFSIKAYISLIKPDQAMWYRACKT 487
G ++ + +LG + K FF+ +A I IK D M Y AC +
Sbjct: 889 MGAGGGGVGTINRREMKTLQAVKEENLGMGEEGKTDFFTTRATIIHIKSDNIM-YPACGS 947
Query: 488 --CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS 545
C+KKVT+ + G+ CE C+K + + RYIM V D + AW+ +FN+ E I+G +
Sbjct: 948 DNCSKKVTE-VHDGWRCEKCEKTFPKPNYRYIMSLSVADYTQTAWLQVFNDPGELILGMT 1006
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
A EL+ELK + ++ SY +++ T + + Q Y ++ R R V +D+A
Sbjct: 1007 ASELHELKEE--NEASYTTAIEKATSQTWMFQCRAQQSTYQDQSRVRYGVNRAHKIDYAQ 1064
Query: 606 ESKFLLEEI 614
ES+ LLE I
Sbjct: 1065 ESRALLEAI 1073
>gi|156843819|ref|XP_001644975.1| hypothetical protein Kpol_1025p37 [Vanderwaltozyma polyspora DSM
70294]
gi|156115629|gb|EDO17117.1| hypothetical protein Kpol_1025p37 [Vanderwaltozyma polyspora DSM
70294]
Length = 618
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 309/585 (52%), Gaps = 34/585 (5%)
Query: 48 DGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALE 107
DG +KA+L + +++ +Q LIR+ I + + L++ E+V E
Sbjct: 52 DGVHHMKALLRNQAATKFQQNELQRGDLIRVTVAEPAIIKERKKYVLLIDDFELVRSGAE 111
Query: 108 MEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQE-----------MVAKSAAQILR 156
+ IE ++ F Q++ + + Q +
Sbjct: 112 V---IEQTTEFLDAYFMQHQDEVLGESASSTTAAAPQSGATAAASSAPVATTTHQSNSTS 168
Query: 157 DQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
QN M+ + + +R + + L+PYQ WTIK RV+ KG ++T+ N +GEG +F+V
Sbjct: 169 HQNNTMSDSQK---SRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQKGEGKLFSVNF 225
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE++L+ +
Sbjct: 226 LDTSG-EIRATAFNDMATKFNEVLQEGKVYYVSKARLQPAKPQFSNLSHPYELSLDRETV 284
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+EE +E+ +P+T F+F+ +D + + + VD++GV+Q V+P + K+ + +
Sbjct: 285 IEECQDESN-VPKTHFSFIKLDAI-QNQEASSTVDVLGVIQTVNPHFELTSKAGKKF-DR 341
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
RDIT+ D++ +++V LWN+ A + N + IVAIK ++V DF G SLS S
Sbjct: 342 RDITIVDDSGFSISVGLWNQQALDF------NLPEGSIVAIKGVRVSDFGGKSLSMGFNS 395
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL-AKNGARSMYSDRVSLTHITSNP 455
T++ +P++PEA LK WY++ GK + +S+ +G + + S R ++ S+
Sbjct: 396 TLIPNPEIPEAYSLKGWYDTSGKNENFSSLNQEVGGAPSSDNLMKFISQRTTIAKAQSDN 455
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECS 513
EK FFS+KA +S +K D Y AC CNKKV + GS + CE C K E+
Sbjct: 456 LGKSEKGDFFSVKASVSFLKVDN-FAYPACTNADCNKKVIEHNGS-WRCERCDKTSEQPE 513
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RY++ + D +G+ W+++FN++A++++G A+ L ELK D +++ K + + P
Sbjct: 514 WRYMLTISIMDETGQMWLTLFNDQAKQLLGIDANSLIELKD--SDPDAFSKKTQSIQMNP 571
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ R+ + YN++ R R TV + +++ ES FL E+SK +
Sbjct: 572 YDFRIRAREDNYNDQTRIRYTVSNLHKLNYKVESDFLASELSKAL 616
>gi|397491957|ref|XP_003816902.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Pan
paniscus]
Length = 616
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 251/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 242 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDR-HLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 301 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 360 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDSEGQALDGVSISDLKSGGVGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 526 NQWVTCFQESAEAILGHNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 584 ESRIKATVMDVKPVDYREYGRRLVMSIRR 612
>gi|432889884|ref|XP_004075379.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oryzias latipes]
Length = 598
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 199/612 (32%), Positives = 326/612 (53%), Gaps = 58/612 (9%)
Query: 27 EIVVQVLDL-KLTG----NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDY 81
E ++Q++++ K+ G +R+ SDG+ L + + S + + NI + + LL
Sbjct: 20 EAILQLVNIRKIDGGSGPSRFRVMMSDGRHTLSSFMLSTQLNCMAEENILAQNCVCLLKR 79
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIK----IEVKSDESGIIF-KPKQEDEVKKDGP 136
+ + + +I+ + EV+ PA E+ K + + G+ P QE+ +
Sbjct: 80 HVTNVLKDGRRVVIILEIEVIKPAGEVGGKLGDPVPYNEAQKGVSQPAPAQENRLP---- 135
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAM------TRRVHPLVSLNPYQGNWTIK 190
L+P+ ++ KS N + A LAM + +V P+ SLNPYQ WTI+
Sbjct: 136 ---LQPQNKIEVKSF-------NRDFGKKAPLAMPSTPGGSSKVVPIASLNPYQSKWTIR 185
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
RVT+K +RT+ N+RG+G +F++EL DE G +I+ T FN+ KF+ ++GKVYYIS+
Sbjct: 186 ARVTNKSGIRTWSNSRGDGKLFSMELVDESG-EIRVTGFNQEVDKFFSLIEVGKVYYISK 244
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
G+L++ANKQ+ +V+NDYEM LN S + E+ +P + +FVPI +L + +V
Sbjct: 245 GSLKIANKQYTSVKNDYEMTLNGESTI-LPCEESGDVPMMQCDFVPIGDL-ESRDKDAIV 302
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IGV ++V + K+N E V KR +++ D + + VTV+LW E A E D +
Sbjct: 303 DVIGVCKSVDEVTRLTTKTNRE-VSKRSLSLMDMSGKLVTVTLWGEEA-----EKFDGSG 356
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG---KGTSMASIG 427
+ PIVAIK K+ DF G SLS ST++++PD+PEA KL+ WY+ +G +G S+ +
Sbjct: 357 Q-PIVAIKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKDGHAVEGQSLTELK 415
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRAC- 485
G G + N +L+ + N LG EK ++S A + ++ + + Y+AC
Sbjct: 416 GGSGGGSTNWK--------TLSDL-KNEHLGHGEKADYYSCIATVVYLRKENCL-YQACP 465
Query: 486 -KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
+ CNKKV D + CE C K R I+ A + D W++ F E AE I+G
Sbjct: 466 NQDCNKKVIDQHNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQ 525
Query: 545 SADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFA 604
+A L +LK +++++ ++ + + R V + YN+E R + TV + PVD
Sbjct: 526 NAAYLGQLKDS--NESAFDEVFQQANFKTFVFRNRVKLETYNDESRIKATVMDLKPVDHK 583
Query: 605 AESKFLLEEISK 616
K L+ I K
Sbjct: 584 DYIKSLIVNIRK 595
>gi|426383460|ref|XP_004058298.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Gorilla gorilla gorilla]
Length = 648
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 193/601 (32%), Positives = 310/601 (51%), Gaps = 56/601 (9%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ +
Sbjct: 87 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEEQLSSNCVCQIHRFI 146
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKI--EVKSDESGIIFKPKQEDEVKKDGPGIVL 140
+N + + +I+ + EV+ A + +KI V +E + K +
Sbjct: 147 VNTLK-DGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGSTVSK---------------V 190
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMR 200
+ K+A L +G +V P+ SL PYQ WTI RVT+K +R
Sbjct: 191 YGASKTFGKAAGPSLSHTSG--------GTQSKVVPIASLTPYQSKWTICARVTNKSQIR 242
Query: 201 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQF 260
T+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GTL++ANKQF
Sbjct: 243 TWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQF 301
Query: 261 KTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS 320
V+NDYEM N + V ++ +P +F+F ID+L + LVDIIG+ ++
Sbjct: 302 TAVKNDYEMTFNNETSVMPCEDD-HHLPTVQFDFTGIDDLENKSKDS-LVDIIGICKSYE 359
Query: 321 PTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL 380
I +SNN V KR+I + D + + VT +LW E A + + P++AIK
Sbjct: 360 DATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQPVLAIKGA 413
Query: 381 KVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNG 437
+V DF G SLS L ST++ +PD+PEA KL+ W+++EG+ G S++ + SG +
Sbjct: 414 RVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTN 473
Query: 438 ARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDA 495
+++Y + + N GD KP +FS A + ++ + M Y+AC T CNKKV D
Sbjct: 474 WKTLYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQ 525
Query: 496 LGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
Y CE C R I+ + D W++ F E AE I+G +A L ELK +
Sbjct: 526 QNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDK 585
Query: 556 LGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++ +++ + + + RV V + YN+E R + TV V PVD+ + L+ I
Sbjct: 586 --NEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIR 643
Query: 616 K 616
+
Sbjct: 644 R 644
>gi|168277810|dbj|BAG10883.1| replication protein A 70 kDa DNA-binding subunit [synthetic
construct]
Length = 616
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 251/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 242 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 301 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDASGKVVTAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 360 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 584 ESRIKATVMDVKPVDYREYGRRLVMSIRR 612
>gi|4506583|ref|NP_002936.1| replication protein A 70 kDa DNA-binding subunit [Homo sapiens]
gi|1350579|sp|P27694.2|RFA1_HUMAN RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein
gi|337489|gb|AAA36584.1| replication protein A, 70-kDa subunit [Homo sapiens]
gi|17390283|gb|AAH18126.1| Replication protein A1, 70kDa [Homo sapiens]
gi|46430939|gb|AAS94324.1| replication protein A1, 70kDa [Homo sapiens]
gi|119610980|gb|EAW90574.1| replication protein A1, 70kDa [Homo sapiens]
gi|158260431|dbj|BAF82393.1| unnamed protein product [Homo sapiens]
gi|313883656|gb|ADR83314.1| replication protein A1, 70kDa [synthetic construct]
Length = 616
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 251/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 242 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 301 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 360 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 584 ESRIKATVMDVKPVDYREYGRRLVMSIRR 612
>gi|427789109|gb|JAA60006.1| Putative replication factor a 1 rfa1 replication factor a 1 rfa1
[Rhipicephalus pulchellus]
Length = 600
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 201/630 (31%), Positives = 340/630 (53%), Gaps = 49/630 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL----TGNRYMFNASDGKK-RLKA 55
M+ ++ A+ IL+N D V+QVL+ K T +RY SDG + A
Sbjct: 1 MENRLTAGAVERILNNQQVDKP------VLQVLNFKPISSNTADRYRLLLSDGVQCHTYA 54
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + L+ + + I +++L Y N + + +K LIV V++ + ++
Sbjct: 55 MLGTQLNGMITNNEIDKFAVVQLDKYMCNVV-SPDKKVLIVLDLTVIAKGSTVGCRL--- 110
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKP--KQEMVAKSAAQILRDQNGNMA-PAARLAMTR 172
G P + G KP +Q A SAA GN A PA+ +
Sbjct: 111 ----GSPVIPASSSGAAQPTDGGANKPPLQQNSAAPSAAPSF----GNRAYPASTSDVV- 161
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
V P+ SL PYQ WTI+ RVT+K +R + N++GEG +F+++L DE G +I+AT FN
Sbjct: 162 -VVPIASLTPYQNRWTIRARVTNKSGIRNWSNSKGEGKLFSMDLLDESG-EIRATAFNAE 219
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANK--QFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+FYD ++ KVYYISR ++ K F +++ND+EM+L + + + T IP
Sbjct: 220 CDRFYDVIEVNKVYYISRAVIKNVKKGYSFSSIKNDFEMSLISETTITPCDDVTPNIPTL 279
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+FNFVPI L + ++ ++D+IGV ++ S ++ R++ ++ + KRD+++ D + V+
Sbjct: 280 QFNFVPISRL-QEISKDSVIDVIGVCKSASDVQTVTRRTTSQELKKRDVSLVDRSGTEVS 338
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
++LW + A E D +D +P+VA+K +V DF G+SLS + S + V+PD+PE+ L
Sbjct: 339 LTLWGDQA-----EKFDGSD-NPVVAVKGARVSDFSGVSLSLISSSMLQVNPDIPESHAL 392
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
WY EG S+ S + G ++ S+ + +KP ++S+KA
Sbjct: 393 MGWYSREGTLLQTHSL-----STQRGGPMGGNANWKSIAQAKAEGLGQGDKPDYYSVKAC 447
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSG 527
+S+I+ + + Y+AC + CNKKV D L +GY+ CE C + E R ++ A + D S
Sbjct: 448 VSIIRKENCL-YKACPSENCNKKVVD-LQTGYYRCEKCAQETMEFKWRLLVSANLTDFSD 505
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLG-DDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
W++ F +EAE +IG SA++L E+ S +D+ Y+ L +V + P + R+ + YN
Sbjct: 506 GQWVTCFGKEAETLIGASAEDLGEMYSNSSKEDSRYEDILNDVPFKPFIFRLRTKMEVYN 565
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+E R + +V +V+PVD+ +K LL++I++
Sbjct: 566 DESRLKTSVMSVSPVDYIEYTKKLLKDIAE 595
>gi|62089044|dbj|BAD92969.1| replication protein A1, 70kDa variant [Homo sapiens]
Length = 630
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 251/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 197 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 255
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 256 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 314
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 315 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDASGKVVTAT 373
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 374 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 427
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 428 WFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 480
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 481 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 539
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 540 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 597
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 598 ESRIKATVMDVKPVDYREYGRRLVMSIRR 626
>gi|366997334|ref|XP_003678429.1| hypothetical protein NCAS_0J01120 [Naumovozyma castellii CBS 4309]
gi|342304301|emb|CCC72091.1| hypothetical protein NCAS_0J01120 [Naumovozyma castellii CBS 4309]
Length = 613
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/580 (29%), Positives = 304/580 (52%), Gaps = 33/580 (5%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG +KA+L + +S+ S +Q +IR+L + K + +++ E+V +
Sbjct: 53 SDGVYHMKALLRNQAASKFQSLELQRGDVIRVLAAEPAIVKEKKKYVILIDDFELVQSGV 112
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPG------IVLKPKQEMVAKSAAQILRDQNG 160
E+ + S F + + DG V P+Q+ + +
Sbjct: 113 EL---VNQSSTFLDSYFAEHPNETLSDDGSNSNNQAPFVPTPQQQPQHSTTS-------S 162
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
P++ ++ + + L+PYQ WTIK RV+ KG ++ + N RG+GC+FNV D
Sbjct: 163 TNFPSSHSQKSKAIFAIEQLSPYQNAWTIKARVSYKGEIKKWHNQRGDGCLFNVNFLDTS 222
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+AT FNE A KFY+ Q GKVYY+S+ L+ A QF + + YE++++ + VEE
Sbjct: 223 G-EIRATAFNENAEKFYEILQEGKVYYVSKARLQPAKPQFTNLTHPYELSMDRETVVEEC 281
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+E +P+T FNF+ +D + N T VD++G+++ V+P + ++ +RDI+
Sbjct: 282 HDEDN-VPKTHFNFIKLDAVQNQENNTN-VDVLGIIKTVNPHFELTSRAGKRF-DRRDIS 338
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
+ D+T ++V LWN+ A + N + +VAIK ++V DF G SLS ST++
Sbjct: 339 IVDDTGFEISVGLWNQQALDF------NLPEGSVVAIKGVRVSDFGGKSLSMGFNSTLVS 392
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIG--SGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+P++PEA LK WY++ G+ S+ +G+G+++ S R++++ +
Sbjct: 393 NPEIPEAFSLKGWYDNTGRTGHFTSLKQENGMGAISAENLTKFISQRITISRAIAENLGK 452
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
EK +FS+KA IS +K D Y AC + CNKKV + + CE C+ N+ RY
Sbjct: 453 SEKGDYFSVKAAISFLKVDN-FAYPACSNENCNKKVIEQPDGTWRCEKCETNNPAPEWRY 511
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
++ + D + + W+++FNE+A++++ A+ L LK D + + + + +
Sbjct: 512 MLTISIMDETNQLWLTLFNEQAQQLLEVDANTLIALKD--NDPEEFTKRTQNIQMNEYDF 569
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ + YN++ R R TV + +++ E+ FL E+SK
Sbjct: 570 RIRAREDNYNDQTRIRYTVANIHKLNYKVEADFLATELSK 609
>gi|241950583|ref|XP_002418014.1| replication factor-A protein 1, putative [Candida dubliniensis
CD36]
gi|223641353|emb|CAX43313.1| replication factor-A protein 1, putative [Candida dubliniensis
CD36]
Length = 623
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 181/626 (28%), Positives = 321/626 (51%), Gaps = 58/626 (9%)
Query: 22 SSDIPEIV----VQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIR 77
S IP I+ ++ +DL ++ +DG+ ++ + + + + N Q +++
Sbjct: 22 SVKIPMILQITNIKAVDLPNDVKKFRILLNDGEYSTHGLIDESCNEYIKNNNCQRYAIVQ 81
Query: 78 LLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD-------ESGIIFKPKQEDE 130
+ ++ I + + ++ EV+SP E + D E + K+ D
Sbjct: 82 VNAFS---IFATQKHFFVIKNFEVLSPTSEKSHNNFIPVDTYFNEHPEEAHLTLTKKPDS 138
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRD-QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTI 189
++++ P + P +A+S D +G A + R+V P+ +++PYQ NWTI
Sbjct: 139 LERESPAPGVTPP---LAQSTNSFKSDVGSGVPAQSKPPGPHRKVSPIETISPYQNNWTI 195
Query: 190 KVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS 249
K RV+ KG++RT+ N++GEG VF L DE +I+A+ FNE A K + + GKVYYIS
Sbjct: 196 KARVSYKGDLRTWSNSKGEGKVFGFNLLDE-SDEIKASAFNETAEKAHKLLEEGKVYYIS 254
Query: 250 RGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL 309
+ + A K+F T+ + YE+ ++++E+ E +E+ +P+ FNFV +D++ + + +
Sbjct: 255 KARVAAARKKFNTLSHPYELTFDKDTEITECFDESD-VPKLNFNFVKLDQI-QNLEANSI 312
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
+D++G ++ V P I KS + +R+I V DET V + LWN AT+ +
Sbjct: 313 IDVLGALKTVYPPFQITAKSTGRVFDRRNILVVDETGFGVELGLWNNTATDF------DV 366
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI--- 426
++ +VA+K KV DF G +LS +++ +P PE+ KLK WY++ G S S+
Sbjct: 367 EEGTVVAVKGCKVSDFGGRTLSLTQAGSIIPNPGTPESFKLKGWYDNIGIHESFKSLKID 426
Query: 427 --GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRA 484
GSG +A+ R+S+ S +KP +FSIKA ++ KP+ Y A
Sbjct: 427 TGGSGADKIAQ---------RISINRALEEHSGSTDKPDYFSIKASVTFCKPEN-FAYPA 476
Query: 485 C-------------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAW 530
C +TCNKK+ G W CE C EE + RY++ V D +G W
Sbjct: 477 CPNLVNSADATRPAQTCNKKLVQQDHDGTWRCEKCAMTYEEPTWRYVLSCSVTDSTGHMW 536
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+++F+++A++++G A EL +K + + + + LRV Q+ YN+E +
Sbjct: 537 LTLFDDQAKKLLGIDATEL--IKKKEENPEQVNQIMNNTLFKEFSLRVKARQETYNDELK 594
Query: 591 QRVTVRAVAPVDFAAESKFLLEEISK 616
R + +D+A+ES+FL++E+ +
Sbjct: 595 TRYQAAGINELDYASESQFLIKELDQ 620
>gi|332846842|ref|XP_511254.3| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Pan
troglodytes]
gi|410218106|gb|JAA06272.1| replication protein A1, 70kDa [Pan troglodytes]
gi|410264556|gb|JAA20244.1| replication protein A1, 70kDa [Pan troglodytes]
gi|410300150|gb|JAA28675.1| replication protein A1, 70kDa [Pan troglodytes]
gi|410340247|gb|JAA39070.1| replication protein A1, 70kDa [Pan troglodytes]
Length = 616
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 251/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 242 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDR-HLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 301 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 360 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDAEGQALDGVSISDLKSGGVGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 584 ESRIKATVMDVKPVDYREYGRRLVMSIRR 612
>gi|440912313|gb|ELR61897.1| Replication protein A 70 kDa DNA-binding subunit [Bos grunniens
mutus]
Length = 616
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 248/452 (54%), Gaps = 24/452 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 242 ADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSV-MPCEDGHHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIG+ +N I KSNN V KR+I + D + + V +
Sbjct: 301 DFTGIGDL-ESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW + A + + P++AIK +V DF G SLS L ST++V+PD+PEA KL+
Sbjct: 360 LWGDDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDSEGQALDGISISDLKSGGAGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G S L ELK + ++ +++ + + R+ V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQSTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
E R + TV V PVD+ + L+ I + +
Sbjct: 584 ESRIKATVVDVKPVDYREYGRRLVMNIRRNAA 615
>gi|417411795|gb|JAA52323.1| Putative replication factor-a protein 1, partial [Desmodus
rotundus]
Length = 588
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 255/455 (56%), Gaps = 30/455 (6%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 155 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 213
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV---EEAVNETAFIPQ 289
A KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V E+ N +P
Sbjct: 214 ADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGRN----LPT 269
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+F F ID+L + LVD+IG+ ++ I K+NN V KR+I + D + + V
Sbjct: 270 VQFGFTKIDDLESKPKDS-LVDVIGICKSYEDATKITVKANNREVSKRNIYLMDTSGKVV 328
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
+ +LW E A + + P++AIK +V DF G SLS + STV+V+PD+PEA K
Sbjct: 329 SATLWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVISSSTVIVNPDIPEAYK 382
Query: 410 LKSWYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
L+ W++SEG+ G S++ + SG + + +++Y + + N GD K +FS
Sbjct: 383 LRGWFDSEGQALDGVSISDLKSGGTAGSATNWKTLYEVK------SENLGQGD-KADYFS 435
Query: 467 IKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
A + ++ + +M Y+AC T CNKKV D Y CE C + R I+ + D
Sbjct: 436 CVATVVYLRKENSM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIAD 494
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
W++ F E AE I+G S L ELK + ++ +++ + + + ++ V +
Sbjct: 495 YQDNQWVTCFQESAEAILGQSTAYLGELKEK--NEQAFEEIFQNANFRSFVFKIRVKLET 552
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
YN+E R + TV V PVD+ S+ ++ I + +
Sbjct: 553 YNDESRIKATVMDVKPVDYREYSRRMIMNIRRNAA 587
>gi|110756775|ref|XP_001121722.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Apis mellifera]
Length = 597
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 326/612 (53%), Gaps = 53/612 (8%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + V+Q+L K +G RY SDGK+ +L + L+S + + + +
Sbjct: 17 DVDKPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLNSMITENILTEFSICQ 76
Query: 78 LLDYALNEI--PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG 135
+ YA++ + K ++ +++ + I ++V DE G K + DG
Sbjct: 77 INRYAISMVNNAGKQKRVMVI-----------LNIDLKVPGDEVG--HKIGNPTNAEADG 123
Query: 136 PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTR----RVHPLVSLNPYQGNWTIKV 191
KP Q +A+SA ++ Q N+ P + + P+V+L+PYQ W IK
Sbjct: 124 DS---KP-QAQIAQSAQSVVPQQQTNLKPNHNMQQSSTNNISTTPIVALSPYQNRWVIKA 179
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RV SK N+RT+ N+RGEG +F+++L DE G +I+ T F KFYD ++GKVYYISR
Sbjct: 180 RVVSKSNIRTWSNSRGEGKLFSMDLIDESG-EIRCTAFRNECDKFYDMLEIGKVYYISRA 238
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
TL+ ANKQF ++NDYEM L +SE+ + IP +F+FV I+++ + ++++
Sbjct: 239 TLKPANKQFNNLKNDYEMTLIGDSEIIPCHDSGDDIPSLQFDFVSINDINKK-EQNDIMN 297
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
I+G+V+ + +++ + KRD+++ DE+ TVT++LW A E D +
Sbjct: 298 ILGIVKYSGDLQILTSRNSGRELRKRDVSLVDESNTTVTLTLWGSQA-----EEFDGS-S 351
Query: 372 SPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+P++A+K ++ +F G +LSTL + + + PDLP A +L+ W+ + G+ S+
Sbjct: 352 NPVLAVKGARITEFNGGKNLSTLSSTVLQIDPDLPAAHRLRGWFNTMGRNEEATSLSKPF 411
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTC 488
GS G ++ ++ + LG + +++KA +++I+ + A+ Y+AC + C
Sbjct: 412 GSTT--GVSELW---ITFQE-AKDMELGYKNSDIYTVKATLNMIRMENAI-YKACPSENC 464
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV--CDGSGEAWISIFNEEAERIIGCSA 546
KK+ D Y CE C K E + RY ++A + D + W++ FN+EAE+I+ +A
Sbjct: 465 KKKLVDQANDMYRCEKCDK--EYPNYRYRLLANISLADWTDNQWVTAFNDEAEKILSSTA 522
Query: 547 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
EL ELK D ++Y K E T+ + ++ V + + +E R R T V+P+D+
Sbjct: 523 QELGELKEN--DIDAYSEKFSEATFKSFIFKIRVKVEVFGDENRLRATCLGVSPMDYKLY 580
Query: 607 SKFLLEEISKKV 618
+ L+ +I + V
Sbjct: 581 NNHLITQIKELV 592
>gi|115496244|ref|NP_001068644.1| replication protein A 70 kDa DNA-binding subunit [Bos taurus]
gi|111308484|gb|AAI19987.1| Replication protein A1, 70kDa [Bos taurus]
gi|296476839|tpg|DAA18954.1| TPA: replication protein A1 [Bos taurus]
Length = 616
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 248/452 (54%), Gaps = 24/452 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 242 ADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSV-MPCEDGHHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIG+ +N I KSNN V KR+I + D + + V +
Sbjct: 301 DFTGIGDL-ESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW + A + + P++AIK +V DF G SLS L ST++V+PD+PEA KL+
Sbjct: 360 LWGDDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDSEGQALDGISISDLKSGGAGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G S L ELK + ++ +++ + + R+ V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQSTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
E R + TV V PVD+ + L+ I + +
Sbjct: 584 ESRIKATVVDVKPVDYREYGRRLVMNIRRNAA 615
>gi|240849249|ref|NP_001155361.1| replication protein A 70 kDa DNA-binding subunit [Ovis aries]
gi|238815019|gb|ACR56706.1| replication protein A1 [Ovis aries]
Length = 616
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 248/452 (54%), Gaps = 24/452 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 242 ADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSV-MPCEDGRHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIG+ +N I KSNN V KR+I + D + + V +
Sbjct: 301 DFTGIGDL-ESKSKDSLVDIIGICKNYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW + A + + P++AIK +V DF G SLS L ST++V+PD+PEA KL+
Sbjct: 360 LWGDDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDSEGQALDGISISDLKSGGAGGSNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQNTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
E R + TV V PVD+ + L+ I + +
Sbjct: 584 ESRIKATVVDVKPVDYKEYGRRLVMNIRRNAA 615
>gi|326511146|dbj|BAJ87587.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 940
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 259/464 (55%), Gaps = 21/464 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N PAA+ RV P+ +LNPYQ WTIK RVT+K ++R + A+G G VF+ +L D
Sbjct: 262 NSGPAAKNEAASRVIPISALNPYQRTWTIKARVTAKAHVRHFNKAKGSGKVFSFDLLDAQ 321
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+AT F+ A +FYD ++ KVY +SRG+L+ ANK+F + NDYEMNL +S +E
Sbjct: 322 GVEIRATCFDAAVDQFYDVIEVDKVYLVSRGSLKPANKRFNPLNNDYEMNLEPSSSIEVC 381
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ + IP+ +FNF I E+ T +D++GVV +V P+ ++ K+ E KR +
Sbjct: 382 SGDDSSIPKLQFNFRQISEIANMDKDT-TIDLLGVVTSVRPSFTVMLKNGGE-TQKRVLQ 439
Query: 341 VADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + +V ++ W GQ+L L ++ +PI+A+KS +VG+F G ++ST S +
Sbjct: 440 LKDMSGCSVDITFWGNFCDAEGQQLQSLCDSGLNPILALKSGRVGEFNGKTVSTTNSSLL 499
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
++PD EAK+L WY +EGK + S+ + S+ + R T + LG
Sbjct: 500 KINPDFAEAKRLGQWYITEGKIAACTSLSGEMSSMGRTDVRKK-------TAQIKDERLG 552
Query: 459 -DEKPVFFSIKAYISLIKPDQAMWYRACKT------CNKKVTDALGSGYW-CEGCQKNDE 510
EKP + +++ IS I D Y AC T CNKKV + G G W CE C+++ E
Sbjct: 553 QSEKPDWITVQGAISQIYTDN-FCYPACTTEVNGKRCNKKVINN-GDGMWLCEKCEQSSE 610
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
C RY++ + D +G + + F E + I+G A +L +K + DD + +++V
Sbjct: 611 TCEYRYLLSCHIQDHTGFTYATAFQESGQEIVGLPAQDLFRIKHEEQDDVRFAEIIQQVR 670
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ +L ++ V ++ YN+E R + V D A ES+FLL I
Sbjct: 671 FQQYLFKLKVKEEVYNDEPRVKCNVVKAEIYDPAKESRFLLGAI 714
>gi|307192559|gb|EFN75747.1| Replication protein A 70 kDa DNA-binding subunit [Harpegnathos
saltator]
Length = 597
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 313/609 (51%), Gaps = 53/609 (8%)
Query: 24 DIPEIVVQVLDLKLTGN----RYMFNASDGKKRLKAILPSNLSSEVISGN-IQNKGLIRL 78
DI + V+Q+L K N RY SDG + + + + +IS N + + +
Sbjct: 17 DIEKPVIQILGHKKLTNSNSDRYRLLVSDGLRTNSFTMLATQLNHLISDNTLSEYTVCEI 76
Query: 79 LDYALNEI--PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGP 136
YAL+ + K ++ +I+ EV++ + KI + S + E E K P
Sbjct: 77 SKYALSSVNNSGKEKRVIIILDVEVIASGEMVGRKIGNPVNTS------RSEPETSK--P 128
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR----VHPLVSLNPYQGNWTIKVR 192
I Q QNG+ + P+ +L+PYQ W IKVR
Sbjct: 129 NISAAAHQ-------------QNGSATKKNNSSNQSSSDISTTPIAALSPYQNKWVIKVR 175
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
V +K +RT+ N+RG+G +FN+EL DE G +I+ T FN A KFYD + G VYYISR
Sbjct: 176 VLTKSQIRTWSNSRGDGKLFNMELVDESG-EIRCTAFNNACDKFYDMIEAGNVYYISRCQ 234
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L+ ANKQF T++ND+EM++ ++EV + + IP +FNF PI +L + +++D+
Sbjct: 235 LKPANKQFNTMKNDFEMSMTNDTEVVPCHDNSEDIPTLQFNFSPISQL-ENMKKDDMIDV 293
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
+GVV +I + + KRDI + D++ TV V+LW + A + +A +
Sbjct: 294 LGVVTTFGELQNIVSQKTGKEHVKRDINIVDDSSVTVCVTLWGKQAEDF------DASNN 347
Query: 373 PIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLG 431
PIVAIKS +VG+F G +LS G + + PDLPEA +L+ WY + G ++ S+ G
Sbjct: 348 PIVAIKSARVGEFNGGKNLSIGGMAIIEKDPDLPEAHRLRGWYSAGGHLENVKSLSKAGG 407
Query: 432 SLAKNGARSMYSDRVSLTHITSNPSLGDEKPV--FFSIKAYISLIKPDQAMWYRAC--KT 487
+ G M + + T + LG++ FS+ A I++I+ + ++ Y+AC ++
Sbjct: 408 A----GGGDMNAPLYTFQEAT-DAKLGEKMDAADVFSVTATINIIRVENSI-YKACPLES 461
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
C KK+ D + CE C K+ R + + D +G WI+ FNEEAE+I+G SA
Sbjct: 462 CKKKLVDQSTGVFRCEKCNKDYPNFLYRLLASMNIADATGSRWITAFNEEAEKILGMSAQ 521
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
EL ELK D+++Y K + ++ V V + + +E R R T +V+P+++
Sbjct: 522 ELGELKEN--DNDAYMQKFGDASFKRFTFGVRVKSEVFQDEMRMRHTCTSVSPLNYRIYL 579
Query: 608 KFLLEEISK 616
LL++ SK
Sbjct: 580 AHLLDKASK 588
>gi|170087382|ref|XP_001874914.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650114|gb|EDR14355.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 602
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 293/581 (50%), Gaps = 47/581 (8%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+RY SDG ++A+L + L+S V I + + N + EK LI+
Sbjct: 49 DRYRIIMSDGIHFIQAMLATQLNSMVQDNTIGRHTVAVIEKLTCNYV---QEKRLIII-- 103
Query: 100 EVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQN 159
+ +++ S E I +PKQ E D P + P + A
Sbjct: 104 --------LSLRVLAHSAEK--IGEPKQM-EAPHD-PAASVTPVTNTIETFAPPPPVPIT 151
Query: 160 GNMAPAARLAMTR---RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
PA ++ V+P+ L+PYQ +WTIK RVT K ++T+ N RGEG +FNV L
Sbjct: 152 KPSKPAEQVTSKDGGPSVYPIEGLSPYQNSWTIKARVTQKSEIKTWSNQRGEGKLFNVTL 211
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
DE G +I+AT FN + Y + + GKVYYIS+ + +A K+F + NDYE++L N+E
Sbjct: 212 MDETG-EIRATGFNLVVDELYPKLEEGKVYYISKARVNLAKKKFSNLANDYELSLERNTE 270
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
V E +ETA +P K++FVP+ L + + + D+IGVV+ VS I K+ N +PK
Sbjct: 271 VVEC-HETANVPMIKYSFVPLSGL-QDLEKDSVCDVIGVVKEVSALSEITSKATNRQIPK 328
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
R++T+ D++ +V ++LW + A NA+ SP++A K +KVGDF G SLS S
Sbjct: 329 RELTLVDKSGFSVRLTLWGKQAEQY------NAEDSPVIAFKGVKVGDFGGRSLSMFSSS 382
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
T+ V+P L E L+ WY+S G S + S G GA +M +R + +
Sbjct: 383 TMHVNPHLEECFALRGWYDSSGAEQSFHAHSSAGG-----GASTMSFNRAEIRSLDDVKQ 437
Query: 457 LG---DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
G +KP +FS +A I IK D + Y AC T CNKKV G + CE C+K+ E
Sbjct: 438 AGFGLPDKPEYFSARATIMHIKADN-ISYPACPTQNCNKKVIQD-GDSWRCEKCEKSFEA 495
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNS--YQMKLKEV 569
RYIM V D SG+AW FNE I G +A+EL ++ D NS Y + L +
Sbjct: 496 PEHRYIMSLAVADASGQAWFQGFNEVGTTIFGKTANELIAIR----DSNSAQYNVLLHKA 551
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
+ Q YN R R + + P+D+ E+ L
Sbjct: 552 NCNTYNFSCRAKQDTYNENTRIRYGISRIYPLDYKEEAMAL 592
>gi|348567597|ref|XP_003469585.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cavia porcellus]
Length = 603
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 251/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+VSL PYQ WTI+ RVT+K +RT+ N+RGEG +F++EL DE G +I+A FNE
Sbjct: 170 KVVPIVSLTPYQSKWTIRARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRAAAFNEQ 228
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+G+L++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 229 VDKFFPLIEVNKVYYFSKGSLKIANKQFSAVKNDYEMTFNSETSVVPCEDD-HHLPTVQF 287
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I KSNN V KR+I + D + + VT +
Sbjct: 288 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVKSNNREVAKRNIYLMDTSGKVVTAT 346
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++++PD+PEA KL+
Sbjct: 347 LWGEDADKF------DGSRQPVIAIKGARVSDFGGRSLSVLSSSTIIMNPDIPEAYKLRG 400
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + G + +++Y + + N GD K +FS A
Sbjct: 401 WFDTEGQTLDGVSISDLKGGALGTSNTNWKTLYEVK------SENLGQGD-KADYFSSVA 453
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C + R I+ A + D
Sbjct: 454 TVVYLRKENCM-YQACPTQECNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQE 512
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G + L ELK + ++ +++ + + ++ V + YN+
Sbjct: 513 NQWVTCFQESAEAILGQNTAYLGELKDK--NEQAFEEVFQNANFRSFTFKIRVKLETYND 570
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 571 ESRVKATVMDVKPVDYRDYGRRLIMNIRR 599
>gi|410910178|ref|XP_003968567.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Takifugu rubripes]
Length = 600
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 198/609 (32%), Positives = 312/609 (51%), Gaps = 39/609 (6%)
Query: 23 SDIPEIVVQVLDL-KLTGN----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIR 77
SD + V+Q+ ++ K+ G R+ SDG+ L + + S + +I N + I
Sbjct: 16 SDANDFVLQLTNIRKIEGGNGLPRFRVMMSDGRHTLSSFMLSTQLNYLIEENTLSLYCIC 75
Query: 78 LLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPG 137
+L + I + +I+ + +V+ A E+ +I + + KP+Q P
Sbjct: 76 VLKRHVTNILKDGRRVVIILEIDVIKRAEEVAGRIGDPTPYTESQTKPQQTTSNHDSRPP 135
Query: 138 IVLKPKQEMVAKSAAQILRDQNGNMAPAARLAM---TRRVHPLVSLNPYQGNWTIKVRVT 194
+ + + EM + G PAA + +V P+ SLNPYQ WTI+ RVT
Sbjct: 136 LQPQNRNEMNRGFSKDF-----GKKGPAAMPSTPGGGSKVVPIASLNPYQSKWTIRARVT 190
Query: 195 SKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLR 254
+K ++RT+ N+RG+G +F VEL DE G +I+ T FN+ KF+ + GKVYYIS+ +L+
Sbjct: 191 NKSSIRTWSNSRGDGKLFTVELVDESG-EIRMTAFNQEVDKFFGLIEAGKVYYISKCSLK 249
Query: 255 VANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
+ANKQ+ +V+NDYEM LN S + ++ +P + +FV I +L + +VD+IG
Sbjct: 250 IANKQYTSVKNDYEMTLNGESSI-VPCEDSCDVPMVQCDFVSIGDLENKEKDS-IVDVIG 307
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
V + KSN EM KR + + D + + VTV+LW E A E D + + PI
Sbjct: 308 VCKKTDEATHFTSKSNREM-SKRTLHLIDMSGKLVTVTLWGEEA-----EKFDGSGE-PI 360
Query: 375 VAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG---KGTSMASIGSGLG 431
+AIK K+ DF G SLS ST++V+PD+PEA KL+ WY+ EG +G S+ + SG G
Sbjct: 361 IAIKGAKLSDFGGCSLSASFSSTLMVNPDIPEAHKLRGWYDKEGHSMEGQSLTEMRSGGG 420
Query: 432 SLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCN 489
N +LT + + EK +++ A I ++ + + Y+AC + CN
Sbjct: 421 GGNTNWK--------TLTDVKTEHLGHGEKADYYTCIATIVYLRKENCL-YQACPSQDCN 471
Query: 490 KKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
KKV D + CE C K R I+ A + D W++ F E AE I+G +A L
Sbjct: 472 KKVVDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYL 531
Query: 550 NELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKF 609
+LK ++ ++ ++ + + R V + YN+E R + TV V PVD SK
Sbjct: 532 GQLKES--NEAAFDEVFQQANFNSFIFRSRVKLETYNDESRIKATVMEVKPVDHKDYSKR 589
Query: 610 LLEEISKKV 618
L+ I K V
Sbjct: 590 LIMNIRKLV 598
>gi|354504939|ref|XP_003514530.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit,
partial [Cricetulus griseus]
Length = 498
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 165/451 (36%), Positives = 250/451 (55%), Gaps = 24/451 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 67 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 125
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 126 VDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSV-LPCEDGHHLPTVQF 184
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIG+ ++ + I KS+N V KR+I + D + + VT +
Sbjct: 185 DFTGISDL-ESKSKDSLVDIIGICKSYEDSTKITVKSSNREVAKRNIYLMDMSGKVVTAT 243
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++V+PD+PEA KL+
Sbjct: 244 LWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRG 297
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG +++Y + + N GD K +FS A
Sbjct: 298 WFDSEGQALDGVSISDLRSGGAGGNNTNWKTLYEAK------SENLGQGD-KADYFSTVA 350
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C + R I+ V D
Sbjct: 351 TVVFLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNVADFQE 409
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + YN+
Sbjct: 410 NQWVTCFQESAEAILGQNTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYND 467
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
E R + TV V PVD+ +K L+ I + +
Sbjct: 468 ESRIKATVMDVKPVDYRDYAKRLIMNIKRNM 498
>gi|448117323|ref|XP_004203227.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
gi|359384095|emb|CCE78799.1| Piso0_000828 [Millerozyma farinosa CBS 7064]
Length = 629
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 181/615 (29%), Positives = 314/615 (51%), Gaps = 48/615 (7%)
Query: 28 IVVQVLDLKLT------GN-----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLI 76
I+VQV ++K+ GN +Y +DG+ L ++ S + + +I
Sbjct: 32 IIVQVSNIKIIDQSPDGGNGESSIKYRVLLNDGQYSLHGLITSECVPYCEANGFRKTSVI 91
Query: 77 RLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQE--DEVKKD 134
+ DY L ++K++++ V +I + S ++ P ++ + VK++
Sbjct: 92 SVQDYNL----VTTQKHIMIINSLEVKHQTSTKITGNIASCDAYYAEHPDEDFLELVKRN 147
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVT 194
G + V + + + NG A + R+V+ + L+PYQ +WTIK RV+
Sbjct: 148 QVGDSFSDNK--VQPPSNRSVSPSNGAAPKGASMFQQRQVNAIEQLSPYQNHWTIKARVS 205
Query: 195 SKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLR 254
KG++R + NARGEG +FNV DE +I+AT FN+ A KFY + + GKVYY+S+ ++
Sbjct: 206 YKGDIRKWSNARGEGKLFNVNFLDE-SDEIRATAFNDLADKFYQQLEEGKVYYVSKARIQ 264
Query: 255 VANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
+ QF + + YE+ L+ ++ +EE +T+ +P+ FNF ++++ +VD+IG
Sbjct: 265 QSKPQFSHLSHPYELALDRDTVIEECF-DTSNVPKIHFNFTKLNDI-ENAEANSIVDVIG 322
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
V++ V+P I KS + +R+IT+ D++ +TV LWN A + + +
Sbjct: 323 VLKEVNPVFQITAKSTGKPFDRRNITIVDDSNVAITVGLWNTSAVDF------TVSEGSV 376
Query: 375 VAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLA 434
+A K K+ DF G SL+ +++V+PD PEA LK W++++G + S+ +
Sbjct: 377 IAFKGCKIQDFAGRSLTLTHAGSMMVNPDTPEAYSLKGWFDNKGVHENFKSLKN-----E 431
Query: 435 KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--------- 485
+ ++ ++ R S+ EKP FF+IKA I+ K + Y AC
Sbjct: 432 NSATKNAFNSRKSILQAQEENLGMSEKPDFFNIKATINFFKTEN-FCYPACNNVLDSGSQ 490
Query: 486 ---KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
TCN+KV + + CE C N E RYI+ V D +G+ WI++F++EA+++
Sbjct: 491 QLSNTCNRKVVEQSDGTWRCEKCDMNFAEPHYRYILNCSVMDSTGQLWITLFDQEAQKLF 550
Query: 543 GCSADELNELKSQL--GDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
G A EL +LK Q G+++ +Q + +VT R+ Q YN R R V +++
Sbjct: 551 GIPAGELLKLKEQQMNGENSEFQKIINDVTMKGFNFRLKARQDSYNGVLRVRYQVLSISD 610
Query: 601 VDFAAESKFLLEEIS 615
VDF AE L+ ++S
Sbjct: 611 VDFNAECDHLITQLS 625
>gi|405970353|gb|EKC35267.1| Replication protein A 70 kDa DNA-binding subunit [Crassostrea
gigas]
Length = 624
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 249/464 (53%), Gaps = 23/464 (4%)
Query: 155 LRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNV 214
L+ N P T RVH + SL PYQ W I+ RVT K +RT+ N+RGEG +F+V
Sbjct: 179 LKTNNSGGTPGG----TSRVHKIDSLTPYQNRWKIRARVTQKSGIRTWSNSRGEGKLFSV 234
Query: 215 ELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNEN 274
LTD D +I+AT FN+A KFY+ ++ KVYY S+ TL+ ANKQ+ TVQNDYEM N +
Sbjct: 235 TLTD-DSAEIRATGFNDAVDKFYELLEVNKVYYFSKATLKTANKQYTTVQNDYEMTFNPD 293
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
+ +E ++++ +P FNFV I+EL T L+D+IGVV+N +I K + + +
Sbjct: 294 TIIEPCDDDSS-LPTMNFNFVKINELESKA-PTSLIDVIGVVKNCGDVTTIIGKQSQKEI 351
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KRD+ + D++ +V ++LW A + P++A+K KV D+ G SLS +
Sbjct: 352 TKRDLQIVDQSGMSVNLTLWGADAQQF------DGSGHPVIAVKGAKVSDYGGRSLSAMA 405
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
S ++ +PDL E LK W+E +G G + G ++ I S
Sbjct: 406 SSQIIHNPDLREGHMLKGWFEHDGHNMDF----HGYKNDGMGGGGGGSTNWKCFAEIKS- 460
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEEC 512
++G +KP +F+ KA + ++ + M Y+AC T CNKKV D Y CE C +
Sbjct: 461 ENIGADKPEYFTTKATVLFLRKENCM-YQACPTESCNKKVVDQGNGMYRCEKCAREFPNY 519
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWV 572
R I+ A + D S W++ F E AE ++G AD+L LK ++ ++ E +
Sbjct: 520 KWRMILSANLGDYSDNQWVTCFQESAEAMLGIKADDLGALKDS--NEQAFDQVFTEACFK 577
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ + + YN+E R + + +DF +S+ L+EEI K
Sbjct: 578 SYIFKFRAKVETYNDESRLKTVTMNASTIDFKEQSQRLIEEIKK 621
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 268/467 (57%), Gaps = 26/467 (5%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P A+ R P+ +LNPYQ WTIK RVT+K ++ YKNA+G G +FN +L D
Sbjct: 315 NNGPVAKNGAALRTVPISALNPYQRTWTIKARVTAKSQVKHYKNAKGPGKLFNFDLRDAH 374
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+A FN +FYD ++ KVY ISRG+L+ ANKQ+ + NDYE++L+ ++ +E
Sbjct: 375 GGEIRAVCFNTQLDQFYDLIEVDKVYLISRGSLKPANKQYNHLNNDYEVSLDSSTTIEVC 434
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
++ + IP+ +F+F I E+ T +VD++GVV +VSP+ RK E KR +
Sbjct: 435 SDDDSSIPRQQFDFRQISEIANMDKDT-MVDLLGVVTSVSPSSPFTRKDGAE-TQKRVLQ 492
Query: 341 VADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + +V ++ W GQ+L L ++ +P++A++S++VGDF+G ++ST+G S +
Sbjct: 493 LKDMSGFSVEITFWGGFCNAEGQQLQSLCDSGLNPVLALRSVRVGDFKGKNVSTIGSSFL 552
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASI---GSGLGSLAKNGARSMYSDRVSLTHITSNP 455
++PD P+A+ L+ WY +EGK + S+ GSG+G DR ++ I +
Sbjct: 553 KINPDFPDAESLRQWYITEGKNAAFISLSMEGSGMGRT---------DDRKTIEQIKAEN 603
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKT------CNKKVTDALGSGYW-CEGCQKN 508
EKP + ++K IS I D Y AC T CNKKVT+ G G W C+ C+++
Sbjct: 604 LGRSEKPDWITVKGTISHISTDN-FCYPACTTEVNGTRCNKKVTNN-GDGMWQCDKCEQS 661
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
C RY++ ++ D +G ++ + F++ + IIG A +L +K + DD + +++
Sbjct: 662 TPNCEYRYMLQCQIQDYTGTSYATAFHDAGKDIIGLPAQDLYRIKHEEQDDEKFADIIQK 721
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPV-DFAAESKFLLEEI 614
V + L ++ V ++ +N+E R + + + D + ES+FLL I
Sbjct: 722 VRFELFLFKLKVKEEVFNDEPRVKCYIANAQKLEDTSKESRFLLGPI 768
>gi|197098316|ref|NP_001126290.1| replication protein A 70 kDa DNA-binding subunit [Pongo abelii]
gi|75054872|sp|Q5R7Q4.1|RFA1_PONAB RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|55730978|emb|CAH92206.1| hypothetical protein [Pongo abelii]
Length = 616
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 249/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGE +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEEKLFSLELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 242 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 301 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 360 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + SG +++Y + + N GD KP +FS A
Sbjct: 414 WFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 584 ESRIKATVMDVKPVDYREYGRRLVMSIRR 612
>gi|355767985|gb|EHH62675.1| Replication protein A 70 kDa DNA-binding subunit, partial [Macaca
fascicularis]
Length = 499
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 250/452 (55%), Gaps = 24/452 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 66 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 124
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 125 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDR-HLPTVQF 183
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 184 DFTGIDDL-ESKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 242
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 243 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 296
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++EG+ G S++ + SG +++Y + + N GD KP +FS A
Sbjct: 297 WFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEVK------SENLGQGD-KPDYFSSVA 349
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 350 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQE 408
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G +A L ELK + ++ +++ + + + RV V + YN+
Sbjct: 409 NQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFRVRVKVETYND 466
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
E R + TV V VD+ + L+ I + S
Sbjct: 467 ESRIKATVMDVKSVDYREYGRRLVLSIRRSAS 498
>gi|85102469|ref|XP_961333.1| replication factor-A protein 1 [Neurospora crassa OR74A]
gi|18376393|emb|CAD21282.1| probable single-stranded DNA-binding protein 68k chain [Neurospora
crassa]
gi|28922877|gb|EAA32097.1| replication factor-A protein 1 [Neurospora crassa OR74A]
gi|336473157|gb|EGO61317.1| hypothetical protein NEUTE1DRAFT_144541 [Neurospora tetrasperma
FGSC 2508]
gi|350293584|gb|EGZ74669.1| putative single-stranded DNA-binding protein 68k chain [Neurospora
tetrasperma FGSC 2509]
Length = 610
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/629 (31%), Positives = 320/629 (50%), Gaps = 40/629 (6%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN---------RYMFNASDGKK 51
M ++ A+ + ++P + P ++Q L +K + R+ SD K
Sbjct: 1 MAGQITQGALDAMFNDPD-RAQQQFPVPILQCLQIKTLDSKNGGAGATERFRIVLSDLKN 59
Query: 52 RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIK 111
++ ++ + + V G +Q ++RL Y + K + LIV EV+ +L K
Sbjct: 60 YVQCMMATQTNHLVHDGLLQRGCIVRLKQYQAQCL--KGKNILIVLDLEVIQ-SLGCPEK 116
Query: 112 IEVKSDESGIIFKPKQEDEVKKDG-PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAM 170
+ +P+Q + G G+ +P Q+ + Q R A + +
Sbjct: 117 MGDPQPLGPRSAEPQQNPNLGSTGFYGVKSEPTQD----TKPQFPRQMPSRNASGGQGSS 172
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
T ++P+ L+P+ WTIK RVTSK +++T+ A GEG +F+V DE G +I+AT FN
Sbjct: 173 T--IYPIEGLSPFSHKWTIKARVTSKSDIKTWHKASGEGKLFSVNFLDESG-EIRATGFN 229
Query: 231 EAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ +FYD Q G+VYYIS +++A KQ+ + NDYE+ ++ +E+A ++T+ +PQ
Sbjct: 230 DQVDQFYDLLQEGQVYYISTPCRVQLAKKQWSNLPNDYELTFERDTVIEKAEDQTS-VPQ 288
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+FNFV I EL + V VDIIGV++ V I K+ + KR++T+ D T +V
Sbjct: 289 VRFNFVNIQEL-QDVERDATVDIIGVLKEVQEVTQIVSKTTQKPYDKRELTLVDNTGYSV 347
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
++W + ATN +A IVA K KV DF G SLS L T+ + PD+PEA
Sbjct: 348 RCTIWGKTATNF------DAQPESIVAFKGTKVSDFGGRSLSLLSSGTMAIDPDIPEAHH 401
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
LK WY+S G+ + A+ + + +L GA D +++ + +E P +F++KA
Sbjct: 402 LKGWYDSSGRNNTFAT-HNNMQTLG--GATGRKDDAKTISQVKEENLGTNEAPDYFALKA 458
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGS 526
+ IK D Y C++ CN+KVTD +G G W CE CQ N + RYIM V D +
Sbjct: 459 TVVFIKQDN-FAYPGCRSEGCNRKVTD-MGDGTWRCEKCQINHDRPQYRYIMSVNVNDHT 516
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G+ W+S F++ A I+G SADEL E++ D+ + ++ R +
Sbjct: 517 GQLWLSCFDDTARVIMGKSADELMEIRET--DETRLPAEFEQANCRKLNFRCRAKMDTFG 574
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++R R V +VAP+D+ E L E I+
Sbjct: 575 EQQRIRYQVMSVAPLDYKMEGNKLNELIN 603
>gi|326517527|dbj|BAK03682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 654
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 329/640 (51%), Gaps = 60/640 (9%)
Query: 29 VVQVLDLKLT---------GNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLL 79
+VQV++L+ +R+ SDG + A+ LS + SG I+ +++L
Sbjct: 24 IVQVVNLRCVNVDGRGTPRSDRWRGLVSDGAETCPAMFAGQLSDQARSGLIRRGSVVQLD 83
Query: 80 DYALNEIPTKS-----EKYLIVTKCEVV-SPALEMEI--------KIEVKSDESGIIFKP 125
+Y +N + + +++ +C+++ +P + E K+E +
Sbjct: 84 EYVINMVGGRRVIVVLNLTVLLAECDIIGNPVITPESESSNQNNPKVEQFNGARQYGLAA 143
Query: 126 KQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAM--------------- 170
+ +G V +P + + L D++ P A+ +
Sbjct: 144 GNPSPTRPNGNVPVFQPSVAGSSLNTPTRLSDKSPVFQPTAQPSYRPAPSYKNQGAIAKN 203
Query: 171 --TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
R+ P+ SLNPYQG W IK RVT+KG++R Y NA+G+G VFN +L D DG +I+
Sbjct: 204 EAPARIIPISSLNPYQGRWAIKGRVTAKGDIRRYHNAKGDGKVFNFDLLDSDGGEIRVAC 263
Query: 229 FNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
FN +FY+ ++GKVY +SRG L+ A + + + +++E+ L +S V+ +E + IP
Sbjct: 264 FNAHVDRFYEVVEVGKVYVVSRGNLKPAQRNYNHLNSEWEITLERDSSVDLCPDEDSSIP 323
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+FNF PI E+ GT ++DIIGV +VSP+ ++++K+ E + KR I + D + R+
Sbjct: 324 SQQFNFRPISEIEDTPTGT-VLDIIGVAISVSPSTTVQKKNGTETL-KRIIGLKDMSGRS 381
Query: 349 VTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V +++W + G +L + ++ P++ +K+ +V DF G + T+ S +L+ PDL E
Sbjct: 382 VDLTMWGDFCNREGSQLQEMVERGVFPVLGVKTGRVNDFNGKCIGTISSSQLLIDPDLSE 441
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
A L+ W++ G+ S SI S A S R+++ I +KP + +
Sbjct: 442 AHTLRQWFDGGGRDASTQSI-----SRDHTPAASRNEVRMTIAKIKDEGLGMGDKPDWVT 496
Query: 467 IKAYISLIKPDQAMWYRACKT------CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMV 519
+KA I K D Y AC T CNKKVT SG W C+ C K EC RY++
Sbjct: 497 VKASIIFFKSDN-FCYTACPTKEGDRQCNKKVTKGT-SGLWVCDRCDKEFPECDYRYLLQ 554
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
++ D SG AW++ F E A+ ++GCSA +L K GD ++ L + +LLR+
Sbjct: 555 LQIQDHSGTAWVTAFQETAQELLGCSALDLITYKEN-GDPRFAEIML-SCLFQDYLLRLK 612
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
V ++ Y++E+R + T+ V D AAES+ LL+ +S+ ++
Sbjct: 613 VKEETYSDERRVKNTLVKVERFDPAAESRHLLDLLSRSMA 652
>gi|348540235|ref|XP_003457593.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oreochromis niloticus]
Length = 665
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 257/462 (55%), Gaps = 32/462 (6%)
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
A +A + +V P+ SLNPYQ WTI+ RVT+K ++RT+ N+RGEG +F+ E+ DE G
Sbjct: 225 ANSASPGSSAKVIPIASLNPYQSKWTIRARVTNKSSIRTWSNSRGEGKLFSFEIVDESG- 283
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+ T FN+ KF+ + GKVYYIS+ TL+ ANKQ+ T++NDYEM L+ +S + +
Sbjct: 284 EIRITAFNKEVDKFFSLVEQGKVYYISKATLKPANKQYTTLKNDYEMTLHAHSSI-VPCD 342
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ IP +FVPI EL + ++D+IG+ ++ I K++ E V KR +++
Sbjct: 343 DNQSIPTVHCDFVPIAELENR-DKDAIIDVIGICKSAEDVSRITTKNSRE-VSKRALSII 400
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D+T + VTV+LW E A N + P+VAIK ++ DF G SLS L STV+V+P
Sbjct: 401 DQTGKVVTVTLWGEEAENF------DGSTQPVVAIKGARLSDFGGRSLSALFSSTVMVNP 454
Query: 403 DLPEAKKLKSWYESEGKG------TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
D+P+A +L++WY+ EG T S G+GL K +L+ I +
Sbjct: 455 DIPQAFRLRAWYDREGFAINSQSLTETRSAGTGLNVNWK-----------TLSDIKNEDM 503
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSL 514
EK +FS A + I+ + + Y+AC + CNKKV D Y CE C +
Sbjct: 504 GHGEKAQYFSCVATVLYIRKENCL-YQACPSADCNKKVIDQQNGLYRCEKCNREFPNFKY 562
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPH 574
R ++ A + D W++ F E AE ++G SA+ L L+ D+ ++ ++ + H
Sbjct: 563 RLLLSANLADFGDNQWVTCFQETAEALLGHSAETLGHLRDT--DEAAFDEVFQKANFTTH 620
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + V + YN+E R +VTV V PVD S+ LL+ I K
Sbjct: 621 IFKNRVKLETYNDESRVKVTVMEVQPVDHREYSRRLLQNIYK 662
>gi|171691865|ref|XP_001910857.1| hypothetical protein [Podospora anserina S mat+]
gi|170945881|emb|CAP72682.1| unnamed protein product [Podospora anserina S mat+]
Length = 630
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 318/644 (49%), Gaps = 48/644 (7%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN-------RYMFNASDGKKRLK 54
++ ++ AI I S+P + + P V+Q L +K + RY SD + ++
Sbjct: 3 EQAITQGAIEAIFSDPE-RARAQYPVPVLQCLQIKTLDSKGGGAPERYRIVLSDVRNYVQ 61
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
+L + + V G ++ G++R+ Y + K + LIV + E + +L KI
Sbjct: 62 CMLATQANHVVHEGKLKRGGIVRMKSYQAQAL--KGKNVLIVLELEAIE-SLGAPDKIGN 118
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR- 173
G + + P PK E +S +Q+ R TR
Sbjct: 119 PVGLEGGAKLEEAQPAAAAAAPAFYGAPKGEPTQESKSQVQRQLASRPNNNNHNNNTRTS 178
Query: 174 ------VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
++P+ +L+PY WTIK R+T K +++T+ GEG +F+V L DE ++I+AT
Sbjct: 179 GGVSSTIYPIEALSPYAHKWTIKARLTHKSDIKTWHKNNGEGKLFSVNLLDE-SSEIKAT 237
Query: 228 MFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF 286
MFN+ +FYD Q G+VYYIS +++A KQF + NDYE+ ++ VE+A ++++
Sbjct: 238 MFNDQVDQFYDVLQEGQVYYISAPCRVQLAKKQFSNLPNDYELTFERDTVVEKAEDQSS- 296
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
+PQ +FNF I EL + V VD++GV++ V SI KS + KR++ + D+T
Sbjct: 297 VPQVRFNFCNIQEL-QSVEKDATVDVLGVLKTVHEVSSITSKSTQKPYDKRELELVDQTG 355
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
+V V++W + AT ++A K +V DF G SLS L T+ + PD+PE
Sbjct: 356 YSVRVTVWGKTATEF------QGKPEEVIAFKGTRVSDFNGRSLSLLSSGTMAIDPDIPE 409
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
A LK WY+S G+ + A+ S + S+ GA S ++ + + +G +KP +FS
Sbjct: 410 AHALKGWYDSTGRHSDFAT-HSNMSSV---GAASGRTNEILMIQQVKEKDVGFDKPEYFS 465
Query: 467 IKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVC 523
++A I +K D Y AC++ CNKKVTD +G G W CE C + RYI+
Sbjct: 466 VQATIVHVKQDN-FCYPACRSEGCNKKVTD-MGDGTWRCEKCDVTHDRPEYRYILNFNCS 523
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKS--QLGDDNSYQMKLKEVTWVPHL------ 575
D +G+ W+S F+E+ +++G SADEL E K + GD + K EV +
Sbjct: 524 DHTGQIWLSCFDEQGRKLLGASADELMEWKQIKESGDASDEARKEAEVRFTTAFDSANCR 583
Query: 576 ---LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R Y ++R R + P+D+ E L E I +
Sbjct: 584 KMTFRARAKMDTYGEQQRVRYQLMEATPLDYKMEGNRLAEMIRQ 627
>gi|62751648|ref|NP_001015732.1| replication protein A 70 kDa DNA-binding subunit [Xenopus
(Silurana) tropicalis]
gi|82194954|sp|Q5FW17.1|RFA1_XENTR RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|58477644|gb|AAH89665.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
gi|89269807|emb|CAJ81527.1| replication protein A1 [Xenopus (Silurana) tropicalis]
gi|115312915|gb|AAI23969.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
gi|213624489|gb|AAI71175.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
gi|213625713|gb|AAI71177.1| MGC107891 protein [Xenopus (Silurana) tropicalis]
Length = 609
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 256/450 (56%), Gaps = 19/450 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WT++ RVT+KG +RT+ N+RGEG +F++E+ DE G +I+AT FNE
Sbjct: 175 KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNEQ 233
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ ++ KVYY S+GTL++ANKQ+ +V+NDYEM N + V +++A +P +F
Sbjct: 234 ADKFFSLIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSV-IPCDDSADVPMVQF 292
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
FVPI EL N ++DIIG+ +N + +SNN V KR+I + D + + V+ +
Sbjct: 293 EFVPIGEL-ESKNKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVVSTT 351
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P+VAIK ++ DF G SLS L STV+++PD+PEA KL++
Sbjct: 352 LWGEDADKF------DGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRA 405
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
W++SEG+ SI S ++ G ++ SL + + EK +F+ A I
Sbjct: 406 WFDSEGQVVEGTSI-----SESRGGTGGGNTNWKSLLEVKTENLGHGEKADYFTSVATIV 460
Query: 473 LIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
++ + + Y+AC + CNKKV D + CE C K R I+ A + D W
Sbjct: 461 YLRKENCL-YQACPSQDCNKKVIDQQNGLFRCEKCDKEFPNYKYRLILSANIADFGENQW 519
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
I+ F E AE I+G +A L ELK + ++ +Y + + + R+ V + YN+E R
Sbjct: 520 ITCFQESAESILGQNATYLGELKEK--NEQAYDEVFQNANFRSYTFRIRVKLETYNDESR 577
Query: 591 QRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
+ T V PVD S+ L+ I K +
Sbjct: 578 IKATAMDVKPVDHKEYSRRLIMNIRKMAAQ 607
>gi|325187250|emb|CCA21790.1| replication protein A 70 kDa DNAbinding subunit puta [Albugo
laibachii Nc14]
Length = 612
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 191/611 (31%), Positives = 319/611 (52%), Gaps = 41/611 (6%)
Query: 30 VQVLDLK-------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
+Q++D+K +RY SDG + +L + L + + +++ +++L DY
Sbjct: 15 LQIIDIKKIKPASGAGSDRYRIILSDGTSFISGMLATQLVPLMQNESLKENFVVQLKDYL 74
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALE-MEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLK 141
N++ + + LIV + PA E + ++S +G P V K P +
Sbjct: 75 GNDV--QGRRILIVLSLGEIKPAYERIGNPQSIESINAGRASTPSLGVPVPK--PLSIPS 130
Query: 142 P-----------KQEMVAKSAAQILRDQNGNM-APAARLAMTRRVHPLVSLNPYQGN-WT 188
P + EM + + A + N R R+ + SLNPY G WT
Sbjct: 131 PSVQSLSINQLTRTEMTSSTHAVDGQSSISNHKGSVVREDPNIRLSDIQSLNPYAGGRWT 190
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
IK RVT++ ++ + NARG+G +F+++L D G +I+ATMFN+A KFYD + G+V+Y
Sbjct: 191 IKARVTNRAPIKNWTNARGQGKLFSIDLLDSKGGEIRATMFNDAVDKFYDVLRPGQVFYF 250
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
S G +R+AN++F +V NDYE+ +++SE+ A ++ I Q +NF I L + +
Sbjct: 251 SGGKIRMANRKFSSVNNDYEITFDQHSEISLASDDRG-IQQMNYNFKKIGTLEK-LPADA 308
Query: 309 LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDN 368
+D+IGVV+ V P I K+ ++ KRD+ + D++ V V+LWNE A +N
Sbjct: 309 NIDVIGVVKQVEPMSEIISKAGKQLF-KRDLVLVDDSMAEVRVTLWNERAQEDCSSWTNN 367
Query: 369 ADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS 428
++AIK ++ ++ G S+ TL S+ V+P +PEA L SWY + G TS + S
Sbjct: 368 -----VLAIKGCRISEYNGRSIGTLSSSSFNVNPTIPEAGFLLSWY-NNGGSTSETTSLS 421
Query: 429 GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTC 488
S G+ +++R +L I + D+KP + ++K ++ IK D ++Y+AC C
Sbjct: 422 VGSSGFGGGSLGSFAERANLMDIKARQLGFDQKPDYITVKGTVNYIKHDSGLYYQACTKC 481
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC-SAD 547
NKKV + Y CE CQ + C RYIM + D +G +W++ FN++ I+ +AD
Sbjct: 482 NKKVIADVAQNYSCEKCQTVYKTCENRYIMSLVIADHTGSSWVTCFNDQGRVILNKRTAD 541
Query: 548 ELNELKSQLGDDNS--YQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
E+ E+K D N+ ++ KE + ++ R+ + + E R +V V + P+D+
Sbjct: 542 EIAEIK----DTNTALFEAVFKEALFKSYVWRLRIKAENVQGESRVKVNVVNLEPIDYVK 597
Query: 606 ESKFLLEEISK 616
ESK LL ISK
Sbjct: 598 ESKDLLHAISK 608
>gi|311268067|ref|XP_003131870.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Sus
scrofa]
Length = 616
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 246/452 (54%), Gaps = 24/452 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ + KVYY S+GTL++ANKQF V+NDYEM + + V + +P +F
Sbjct: 242 VDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFSNETSV-MPCEDGHHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIG+ +N I KS N V KR+I + D + + V +
Sbjct: 301 DFTGIADLENKSKDS-LVDIIGICKNYEDVTKITVKSTNREVSKRNIYLMDMSGKVVNAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 360 LWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSILSSSTVIVNPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD KP +FS A
Sbjct: 414 WFDSEGQALDGVSISDLKSGGIGGSNTNWKTLYEVK------SENLGQGD-KPDYFSAVA 466
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 467 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G S L ELK + ++ +++ + + R+ V + YN+
Sbjct: 526 NQWVTCFQESAEAILGQSTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
E R + TV V PVD+ + L+ I K +
Sbjct: 584 ESRIKGTVMDVKPVDYKEYGRRLIMSIRKNAA 615
>gi|115461691|ref|NP_001054445.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|52353639|gb|AAU44205.1| unknown protein [Oryza sativa Japonica Group]
gi|113577996|dbj|BAF16359.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|222629944|gb|EEE62076.1| hypothetical protein OsJ_16860 [Oryza sativa Japonica Group]
Length = 951
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 265/466 (56%), Gaps = 23/466 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N PA+R R+ P+ +LNPYQ WTIK RVT+K ++R + NAR G VF+ +L D
Sbjct: 294 NRGPASRNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFDLLDAQ 353
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNEN-SEVEE 279
G +I+A + E+A KF+ + ++G+VY ISRG+L+ A K++ T+ +DYE+ L+ S VE
Sbjct: 354 GGEIRAQCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEV 413
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++ IP+ ++NF I EL N T +VD++GVV +VSP+ +I RK E KR I
Sbjct: 414 CSDDDNSIPRLQYNFRQISELENMANET-IVDLLGVVTSVSPSATIMRKIGTETR-KRSI 471
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNAD--KSPIVAIKSLKVGDFQGISLSTLGRST 397
+ D + R++ V+LW GQ+L D +PI+A K +VGDF G S+ST+G +
Sbjct: 472 QLKDLSGRSIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIGSTQ 531
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
++++PD PE ++L+ WY +EGK S+ + ++ + AR + + +L
Sbjct: 532 LIINPDFPEVERLRQWYMTEGKTAPCISLSREMLNMGRTDARKTIAQ-------IKDENL 584
Query: 458 GD-EKPVFFSIKAYISLIKPDQAMWYRAC-------KTCNKKVTDALGSGYW-CEGCQKN 508
G EKP + ++KA IS + ++ Y AC + CNKK + G G W C+ C ++
Sbjct: 585 GRLEKPDWITVKAAISHVT-TESFCYPACPKLLPVGRQCNKKAINN-GDGMWHCDRCDES 642
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
+ RY++ ++ D +G + S F+E E+I G A EL +++ DD + ++
Sbjct: 643 FQNPEYRYMLRFQIQDHTGSTYASAFDEAGEQIFGRKAGELFSIRNVDQDDAQFAEIIEG 702
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
V W +L ++ V ++ YN+E+ + T V +D + ES LL I
Sbjct: 703 VRWHLYLFKLKVKEETYNDEQSLKCTAVKVEKLDPSKESNVLLGAI 748
>gi|389641383|ref|XP_003718324.1| replication factor-A protein 1 [Magnaporthe oryzae 70-15]
gi|351640877|gb|EHA48740.1| replication factor-A protein 1 [Magnaporthe oryzae 70-15]
gi|440466778|gb|ELQ36022.1| replication factor-A protein 1 [Magnaporthe oryzae Y34]
gi|440480262|gb|ELQ60936.1| replication factor-A protein 1 [Magnaporthe oryzae P131]
Length = 610
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 322/629 (51%), Gaps = 41/629 (6%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN--------RYMFNASDGKKRL 53
++ ++ AI+ I ++P + P V+Q L +KL G RY SD +
Sbjct: 6 ERQITRGAIAAIFNDPEG-VKTRFPVPVLQCLQVKLLGQQPNAGAAERYRVVLSDVDNYI 64
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIE 113
+ +L + + + +Q ++R+ Y N + KS L++ EV+ +L + KI
Sbjct: 65 QCMLATQANHVIHDDQLQRGCIVRVKSYQANTVKGKS--VLVLLDLEVIQ-SLGVHEKI- 120
Query: 114 VKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR 173
+ + I K + G G + V + +N A+
Sbjct: 121 --GEPASIEAKAENTTNTTIGGSGFYGTKTEPDVKPQIRSQMPTRNTGGGGASHGPGNVN 178
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ S++PYQ WTIK RV+ K ++RT+ A GEG +F+V L DE G +I+AT FN+
Sbjct: 179 IYPIESISPYQHKWTIKARVSQKSDIRTWHKASGEGKLFSVNLLDETG-EIKATGFNDQC 237
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFYD Q G+VYYIS +++A KQF + NDYE+ + +++E+A ++++ +PQ +F
Sbjct: 238 DKFYDILQEGQVYYISTPCRVQMAKKQFTNLPNDYELTFEDGTQIEKAEDQSS-VPQVRF 296
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I EL + V VD+IGV+++V+ I K++ + KR++T+ D++ +V ++
Sbjct: 297 NFCNIQEL-QEVEKDATVDVIGVLKDVADVTQITSKASGKFFDKRELTLVDDSGYSVRMT 355
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W + A N +A +VA K KVGDF G SLS L T+ V PD+PEA +LK
Sbjct: 356 IWGKTAQNF------DAKSESVVAFKGAKVGDFGGRSLSLLSSGTMTVDPDIPEAHRLKG 409
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
W++S G+ + ++ S S+A R D++ H +LG + V+F++KA +
Sbjct: 410 WFDSSGRNDNFSTFNS--NSVAGATGR---QDQILTIHKVKEDNLGVDDVVYFALKATVV 464
Query: 473 LIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEA 529
I+ + Y +C + C+KKVTD LG G W CE C N RYIM V D +G+
Sbjct: 465 YIRQEN-FAYPSCLNEGCSKKVTD-LGDGSWRCEKCDVNHPRPEYRYIMSVNVNDHTGQL 522
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDN--SYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W+S F++ I+G SADEL LK D+N ++ + + R + +
Sbjct: 523 WLSCFDDVGRIIMGKSADELMALK----DENFEAFTREFENANCRKLSFRCRAKMDTFGD 578
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+R R V +D+ +E+ L + I +
Sbjct: 579 NQRVRYQVMGATKMDWKSEAARLADLIKQ 607
>gi|401626961|gb|EJS44874.1| rfa1p [Saccharomyces arboricola H-6]
Length = 621
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 314/589 (53%), Gaps = 41/589 (6%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 51 SDGVYHMKALLRNQAASKFQSMELQRGDIIRVM-IAEPAIVRERKKYVLLVDDFELVQSR 109
Query: 106 LEMEIKIEVKSDESGIIFKPKQEDEVKKD-------------GPGIVLKPKQEMVAKSAA 152
EM + D + + +E KD PG V P + S +
Sbjct: 110 AEMVNQASTFLDN----YFSEHSNETLKDEDITDNSSATNQTNPGNVGLPD---MLHSNS 162
Query: 153 QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
+ + ++ ++ + + L+PYQ WTIK RV+ KG ++T+ N RG+G +F
Sbjct: 163 NLNASEKKFHNESSSSQKSKPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLF 222
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
NV D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+
Sbjct: 223 NVNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLD 281
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
++ VEE +E+ +P+T FNF+ +D + + VN VD++GV+Q ++P + ++
Sbjct: 282 RDTVVEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGVIQTINPHFELTSRAGK 338
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLS 391
+ +RDIT+ D++ +++V LWN+ A + N + + AIK ++V DF G SLS
Sbjct: 339 KF-DRRDITIVDDSGFSISVGLWNQQALDF------NLPEGSVAAIKGVRVTDFGGKSLS 391
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSDRVSLT 449
ST++ +P++PEA LK WY+S+G+ + ++ G+G + G + R+++
Sbjct: 392 MGFSSTLIPNPEIPEAYALKGWYDSKGRNANFTTLKQEPGMGGQSAAGLTKFIAQRITIA 451
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQK 507
+ EK FFS+KA +S +K D Y AC + CNKKV + + CE C
Sbjct: 452 RAQAENLGRSEKGDFFSVKAAVSFLKVDN-FAYPACSNENCNKKVLEQPDGTWRCEKCDT 510
Query: 508 NDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLK 567
N+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N + +
Sbjct: 511 NNASPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANALMSLKEE--DPNEFTKITQ 568
Query: 568 EVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + R+ + YN++ R R TV + +++ AE+ +L +E+SK
Sbjct: 569 SIQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYKAEADYLADELSK 617
>gi|198416884|ref|XP_002127939.1| PREDICTED: similar to MGC107891 protein [Ciona intestinalis]
Length = 607
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 294/590 (49%), Gaps = 41/590 (6%)
Query: 41 RYMFNASDGKKRLKAI-LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
R SDG + L +NL+ V G + ++RL Y ++ +K +I
Sbjct: 41 RIKLALSDGVHSFGTVMLGTNLNHLVNDGILDANSIVRLTHYQSPKMVQNGKKVIICLSL 100
Query: 100 EVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIV---LKPKQEMVAKSAAQILR 156
+VV E+ +I G Q DG + LKP Q + SA Q +
Sbjct: 101 DVVQSGNEVGERI-------GNPVNYAQASA--NDGRAVQNENLKPNQNRMPASAMQSPK 151
Query: 157 DQNGNM-------APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEG 209
G M AP RV P+ SL PYQ W I+ RVT KG MR +KNARGEG
Sbjct: 152 -PTGKMSFGGKGDAPTTPGGTQTRVMPIGSLTPYQNKWAIRARVTQKGAMREWKNARGEG 210
Query: 210 CVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM 269
+F+ + D+ G I+ T F E A KF+ ++GKV+ I+ TL+ AN Q+ + +DYEM
Sbjct: 211 KLFSFTVLDDSG-DIKVTCFKEEADKFFSMVEVGKVFCIANATLKPANPQYNSTTHDYEM 269
Query: 270 NLNENSEVEEAVNETA-FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
L ++ + + ++ A +P+ ++NF I ELG +VN LVD IG++++ S+ +
Sbjct: 270 TLRRDTVITLSEDDDAKLVPKIQYNFKKISELGNHVN--TLVDTIGILKSAEDLSSVMIR 327
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
S N R I + DE+ + V+LW + A E +S +V +KS KV DF G
Sbjct: 328 SQNREAKVRKINLVDESNAEIQVTLWGQEAEKFTSE------ESAVVVLKSAKVSDFGGC 381
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL 448
S+ST+G +TV ++PD+PEA LK WYE+ GK + + +G G G +M ++ +L
Sbjct: 382 SMSTIGSTTVTINPDIPEAFSLKQWYETGGKSQATQVLTTGSG-----GGGNMAANWKTL 436
Query: 449 THITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQ 506
I + EKP + ++KA + K + + Y+AC CNKKV D Y CE C
Sbjct: 437 ADIKTENLGTKEKPDYITVKATVLYCKKENIL-YQACPNDQCNKKVVDLQNGSYRCEKCN 495
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL 566
R I+ + D W++ F ++AE ++ +A +L +LK ++ Y+ L
Sbjct: 496 SESPNFKYRVILNMHMADEFDSTWVTCFQDQAEILLNMTAQQLGDLKDT--NEQEYEAAL 553
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
K V + + ++ V ++N+E+R RVT+ V+P+ K L +I K
Sbjct: 554 KSVDFKSYFFKLRVKSDKFNDEERTRVTIMNVSPMSNVDYIKKLTTDIDK 603
>gi|334324842|ref|XP_001371635.2| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Monodelphis domestica]
Length = 868
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 250/455 (54%), Gaps = 26/455 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WTI RVT+K +RT+ N+RGEG +F++E+ DE G +I+AT FN+
Sbjct: 307 KVVPIASLNPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNDQ 365
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 366 VDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVV-LCEDAHHLPTVQF 424
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIGV ++ + KS+N V KR++ + D + + VT +
Sbjct: 425 DFTVIGDLENKAKDS-LVDIIGVCKSYEDASKVVVKSSNREVSKRNVHLMDTSGKVVTTT 483
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST+LV+PD+PEA KL+
Sbjct: 484 LWGEDADRF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTILVNPDIPEAFKLRG 537
Query: 413 WYESEGKGTSMASI----GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
W++SEG+ + SI G G+G N +++Y + + N GD K +FS
Sbjct: 538 WFDSEGQALEVVSISDARGGGMGGSNTN-WKTLYEAK------SENLGQGD-KADYFSCV 589
Query: 469 AYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
+ ++ + M Y+AC + CNKKV D Y CE C + R I+ + D
Sbjct: 590 GTVVYLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDREFPSFKYRMILSVNIADFQ 648
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
W++ F E AE I+G + L ELK + ++ +++ + + + ++ V + YN
Sbjct: 649 ENQWVTCFQESAEAILGQNTAYLGELKDK--NEQAFEEVFQNANFRSYTFKIRVKLETYN 706
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQ 621
+E R + +V V PVD+ K L+ I K + Q
Sbjct: 707 DESRIKASVLDVKPVDYREYGKRLIMNIRKHAARQ 741
>gi|367005983|ref|XP_003687723.1| hypothetical protein TPHA_0K01560 [Tetrapisispora phaffii CBS 4417]
gi|357526028|emb|CCE65289.1| hypothetical protein TPHA_0K01560 [Tetrapisispora phaffii CBS 4417]
Length = 616
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 315/578 (54%), Gaps = 26/578 (4%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SD +KA+L + +++ + +Q +IR+L + + + L++ EV+
Sbjct: 51 SDSIYHMKALLRNEAATKFQNQELQRGDIIRVLVTEPVIVKERKKFVLLIDDYEVLKTGS 110
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLK--PKQEMVAKSAAQILRDQNGNMAP 164
E+ I S+ F Q + V D K P V+ + N N+A
Sbjct: 111 EL---INQSSEFLDSYFSHHQNEIVGGDDGANATKETPPSNQVSTNDNNASSFNNANVAS 167
Query: 165 A-ARLAMTRRVHPLVS---LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
A + ++R P+ + L+PYQ WTIK RV+ KG+++T+ N +GEG +FNV D
Sbjct: 168 AISSETGSQRSRPISAIEQLSPYQNIWTIKARVSFKGDIKTWHNQKGEGKLFNVNFLDTS 227
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE++++ + +EE
Sbjct: 228 G-EIRATAFNDMATKFNEILQEGKVYYVSKARLQPAKPQFSNLSHPYELSMDRETIIEEC 286
Query: 281 VNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
+E+ +P+T FNFV ++ + + N T +D++GV+Q V+P + K+ + +RDI
Sbjct: 287 KDESN-VPKTHFNFVKLNVVENQEANST--IDVLGVIQTVNPHFELVSKAGKKF-DRRDI 342
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL 399
T+ D+T +++V LWN+ AT+ N + IVAIK ++V DF G SLS ST++
Sbjct: 343 TIVDDTSYSISVGLWNQQATDF------NLPEGSIVAIKGVRVSDFGGKSLSMGFSSTLI 396
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD 459
+P++ EA LK WY++ GK ++ S+ G+++ S+R ++ ++
Sbjct: 397 PNPEVQEAYALKGWYDANGKNSNFTSLKQEGGAVSAQNLIKFISERTTIAKAQADNLGRS 456
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
EK +FS+KA IS +K D Y AC + CNKKV + + CE C KN E RY+
Sbjct: 457 EKGDYFSVKASISFLKVDN-FAYPACSSDDCNKKVLENPDGTWRCERCNKNQESPEYRYM 515
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ + D +G+ W+++FN++A++++G A++L EL+ D +++ +++ P+ R
Sbjct: 516 LTISIIDETGQMWLTLFNDQAKQLLGVDANKLTELRDT--DADAFTKTTQDIQMNPYDFR 573
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ + YN++ R R TV + +++ E+ +L E++
Sbjct: 574 IRAREDNYNDQTRIRYTVSNLHNLNYKVEADYLAGELT 611
>gi|359320313|ref|XP_003639310.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Canis lupus familiaris]
Length = 616
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 252/472 (53%), Gaps = 24/472 (5%)
Query: 150 SAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEG 209
SA++ G ++ +V P+ SL PYQ WTI RVT+K +RT+ N+RGEG
Sbjct: 160 SASKTFGKPGGTSLASSSGGTQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEG 219
Query: 210 CVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM 269
+F++EL DE G +I+AT FNE KF+ + KVYYIS+G L++ANKQF V+NDYEM
Sbjct: 220 KLFSIELVDESG-EIRATAFNEQVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEM 278
Query: 270 NLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKS 329
N + V + +P +F+F I +L + L+DIIG+ ++ I KS
Sbjct: 279 TFNNETSV-MPCEDGHHLPTVQFDFTGIGDLESKTKDS-LIDIIGICKSYEEATKITVKS 336
Query: 330 NNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGIS 389
NN V KR+I + D + + VT +LW E A + + P++AIK +V DF G S
Sbjct: 337 NNREVSKRNIYLMDMSGKVVTATLWGEDADRF------DGSRQPVMAIKGARVSDFGGRS 390
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRV 446
LS L ST++V+PD+PEA KL+ W++SEG+ G S++ + SG +++Y +
Sbjct: 391 LSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGISISDLKSGGTGGGNTNWKTLYEVK- 449
Query: 447 SLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEG 504
+ N GD K +FS A + ++ + M Y+AC T CNKKV D Y CE
Sbjct: 450 -----SENLGHGD-KADYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEK 502
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQM 564
C R I+ + D W++ F E AE IIG + L ELK + ++ +++
Sbjct: 503 CDSEFPSFKYRMILSVNIADFQENQWVTCFQESAEAIIGQNTAYLGELKEK--NEQAFEE 560
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + R+ V + YN+E R + TV V PVD+ + L+ I +
Sbjct: 561 VFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYREYGRRLIMNIRR 612
>gi|346974864|gb|EGY18316.1| replication factor-A protein [Verticillium dahliae VdLs.17]
Length = 617
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 203/628 (32%), Positives = 319/628 (50%), Gaps = 48/628 (7%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLK-LTG-----NRYMFNASDGKKRLKAILPSNLS 62
A+ I ++P + ++ P V+Q L +K L G +R+ SD +++++ + ++
Sbjct: 13 ALDAIFNDPE-NVATRFPVPVLQCLQIKPLAGQQGAADRFRIVLSDINNYVQSMMATQVN 71
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
+ G++ L+R+ Y N + K + LI+ EV+ P L KI +
Sbjct: 72 HVIHDGHLVKNCLVRVTQYQPNSV--KGKNILIILGLEVI-PELGTPEKIG-----DPLA 123
Query: 123 FKPKQEDEVKKDG-PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR----VHPL 177
F+P E G G Q + + P+ +A T ++P+
Sbjct: 124 FEPLPEGAAPNPGNTGNAPIQGQNFYGAKKEEEKEKPRISQIPSRSVAGTSHGSSNIYPI 183
Query: 178 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L+PY WTIK RVT K ++RT+ GEG +F+V L DE G +I+AT FNE ++Y
Sbjct: 184 EALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLDESG-EIKATGFNEQCDQYY 242
Query: 238 DRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
D Q G VYYIS + +A KQF + NDYE+ ++ +E+A ++T +PQ ++NF
Sbjct: 243 DLLQEGSVYYISNPCKVGMAKKQFTNLPNDYELTFERDTVIEKAEDQTN-VPQVRYNFCN 301
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I EL + V VD++GV+++V I KS + KR++T+ D++ +V +++W +
Sbjct: 302 IQEL-QSVEKDATVDVVGVLKDVGEVSQIVSKSTGKPYEKRELTLVDDSNFSVRITIWGK 360
Query: 357 LATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
A D SP +VA K +KV DF G SLS L T+ V PD+P+A +LK W+
Sbjct: 361 SAQGF--------DASPESVVAFKGVKVSDFGGRSLSLLSSGTMSVDPDIPDAHRLKGWH 412
Query: 415 ESEGKGTSMA---SIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
+S G+ + A S+GSGLG A G + D+V + +G EK FF++KA I
Sbjct: 413 DSSGRNDAFATHNSMGSGLG--AATGRPN--EDKVIVQVKDEQLGMG-EKQDFFNLKATI 467
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGE 528
IK D Y AC+ CNKKV D + G W C+ C + + RYIM VCD + +
Sbjct: 468 VYIKQD-TFAYPACRNEGCNKKVVD-MNDGTWRCDKCDVSHDRPEYRYIMSVNVCDHTSQ 525
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W+S F+E I+G SAD+L ELK + GD+ + + R S +
Sbjct: 526 LWLSCFDEVGRSIMGMSADQLMELK-EGGDEATLANAFEAANCKKLAFRCSAKMDTFGES 584
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
+R R R+ APV++ +E L E I +
Sbjct: 585 QRIRYQARSAAPVEYKSEGNKLAELIKQ 612
>gi|336269529|ref|XP_003349525.1| RFA1 protein [Sordaria macrospora k-hell]
gi|380093400|emb|CCC09058.1| putative RFA1 protein [Sordaria macrospora k-hell]
Length = 610
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 312/628 (49%), Gaps = 38/628 (6%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN---------RYMFNASDGKK 51
M ++ A+ + ++P + P ++Q L +K + R+ SD K
Sbjct: 1 MAGQITQGALDAMFNDPD-RAQQQFPVPILQCLQIKTLDSKNGGAGATERFRIVLSDLKN 59
Query: 52 RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIK 111
++ ++ + + V G +Q ++RL Y + K + LIV EV+ +L K
Sbjct: 60 YVQCMMATQTNHLVHDGLLQRGCIVRLKQYQAQCL--KGKNILIVLDLEVIQ-SLGCPEK 116
Query: 112 IEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMT 171
+ +P + G K E + Q R + + T
Sbjct: 117 MGDPQPLGPRGAEPTHNPNLGSTG---FYGVKNEQTQDTKPQFPRQAPSRNTSGGQGSNT 173
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
++P+ L+P+ WTIK RVTSK +++T+ GEG +F+V DE G +I+AT FNE
Sbjct: 174 --IYPIEGLSPFSHKWTIKARVTSKSDIKTWHKPSGEGKLFSVNFLDESG-EIRATGFNE 230
Query: 232 AARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+FYD Q G+VYYIS +++A KQF + NDYE+ ++++E+A ++T+ +PQ
Sbjct: 231 QVDQFYDLLQEGQVYYISTPCRVQLAKKQFSNLPNDYELTFERDTQIEKAEDQTS-VPQV 289
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+FNFV I EL + V +D+IGV++ V I K+ + KR++T+ D T +V
Sbjct: 290 RFNFVNIQEL-QDVEKDATIDVIGVLKEVQEVTQIVSKTTQKPYDKRELTLVDNTGYSVR 348
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
++W + ATN +A IVA+K KV DF G SLS L T+ + PD+PEA L
Sbjct: 349 CTIWGKTATNF------DAQPESIVAMKGTKVSDFGGRSLSLLSSGTMAIDPDIPEAHHL 402
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
K WY+S G+ + A+ + + +L GA D +++ + E P +FS+KA
Sbjct: 403 KGWYDSSGRNNTFAT-HNNMATLG--GATGRKDDTKTISQVKEENLGTGEMPDYFSLKAT 459
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSG 527
+ IK D Y C++ CN+KVTD +G G W CE CQ N + RYIM V D +G
Sbjct: 460 VVYIKQDN-FAYPGCRSEGCNRKVTD-MGDGTWRCEKCQVNHDRPQYRYIMSVNVNDHTG 517
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
+ W+S F++ A I+G SADEL E++ D+ + ++ R +
Sbjct: 518 QLWLSCFDDTARIIMGKSADELIEMREN--DETRLAAEFEQANCRKLNFRCRAKMDTFGE 575
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++R R V + AP+D+ E L E I+
Sbjct: 576 QQRVRYQVMSAAPLDYKMEGNKLNELIN 603
>gi|190406650|gb|EDV09917.1| RF-A [Saccharomyces cerevisiae RM11-1a]
Length = 621
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/590 (30%), Positives = 314/590 (53%), Gaps = 39/590 (6%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 51 SDGIYHMKALLRNQAASKFQSMELQRGDIIRVI-IAEPAIVRERKKYVLLVDDFELVQSR 109
Query: 106 LEMEIKIEVKSDESGIIFKPKQEDEVKKD----GPGIVLKPKQEMVAKSAAQILRDQNGN 161
+M + D + + +E KD G V Q + + + N N
Sbjct: 110 ADMVNQTSTFLDN----YFSEHPNETLKDEDITDSGNV--ANQTNASNAGVPDMLHSNSN 163
Query: 162 MAPAAR--------LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ R TR + + L+PYQ WTIK RV+ KG ++T+ N RG+G +FN
Sbjct: 164 LNANERKFANENPNSQKTRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFN 223
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
V D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+
Sbjct: 224 VNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDR 282
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++ +EE +E+ +P+T FNF+ +D + + VN VD++G++Q ++P + ++ +
Sbjct: 283 DTVIEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPHFELTSRAGKK 339
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
+RDIT+ D++ +++V LWN+ A + N + + AIK ++V DF G SLS
Sbjct: 340 F-DRRDITIVDDSGFSISVGLWNQQALDF------NLPEGSVAAIKGVRVTDFGGKSLSM 392
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSDRVSLTH 450
ST++ +P++PEA LK WY+S+G+ + ++ G+G + + R+++T
Sbjct: 393 GFSSTLIPNPEIPEAYALKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITITR 452
Query: 451 ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKN 508
+ EK FFS+KA IS +K D Y AC + CNKKV + + CE C N
Sbjct: 453 AQAENLGRSEKGDFFSVKAAISFLKVDN-FAYPACSNENCNKKVLEQPDGTWRCEKCDTN 511
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N + +
Sbjct: 512 NARPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQS 569
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + R+ + YN++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 570 IQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYRAEADYLADELSKAL 619
>gi|395853270|ref|XP_003799138.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Otolemur garnettii]
Length = 616
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 255/474 (53%), Gaps = 20/474 (4%)
Query: 147 VAKS--AAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKN 204
V+KS A++ G P +V P+ SL PYQ WTI RVT+K +RT+ N
Sbjct: 155 VSKSFGASKTFGKPGGMSLPNTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSN 214
Query: 205 ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ 264
+RGEG +F+VEL D+ G +I+AT FN+ KF+ ++ KVYY ++GTL++ANKQF V+
Sbjct: 215 SRGEGKLFSVELVDQSG-EIRATAFNDQVDKFFPLIEVNKVYYFTKGTLKIANKQFSAVK 273
Query: 265 NDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMS 324
NDYEM + ++ V ++ +P +F+F I +L + LVDIIGV +N
Sbjct: 274 NDYEMTFSNDTSVMPCEDD-HHLPTVQFDFTGIGDLENKPKDS-LVDIIGVCKNYEDATK 331
Query: 325 IRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD 384
I KS N V KR+I + D + + VT +LW E A + + P++AIK +V D
Sbjct: 332 ITVKSTNREVAKRNIYLMDTSGKVVTTTLWGEDADKF------DGSRQPVMAIKGARVSD 385
Query: 385 FQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSD 444
F G SLS L ST++V+PD+PEA KL+ W++SEG+ SI S L S G+ + +
Sbjct: 386 FGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQALDGVSI-SDLKSGGVGGSNTNWK- 443
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWC 502
+L + S +K +FS A + ++ + +M Y+AC T CNKKV D Y C
Sbjct: 444 --TLNEVKSENLGQGDKADYFSSVATVVYLRKENSM-YQACPTQDCNKKVIDQQNGLYRC 500
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E C R I+ + D W++ F E AE I+G + L ELK + ++ ++
Sbjct: 501 EKCDSEFPNFKYRMILSVNIADFQDNQWVTCFQESAEAILGQNTAYLGELKEK--NEQAF 558
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + + R+ V + YN+E R + TV V PVD+ + L+ I +
Sbjct: 559 EEVFQNANFRSFTFRIRVKLENYNDESRIKATVMDVKPVDYREYGRRLMTNIRR 612
>gi|363754309|ref|XP_003647370.1| hypothetical protein Ecym_6168 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891007|gb|AET40553.1| hypothetical protein Ecym_6168 [Eremothecium cymbalariae
DBVPG#7215]
Length = 620
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/583 (29%), Positives = 300/583 (51%), Gaps = 32/583 (5%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
+DG +KA+L S + +S N++ + R++ I K + LI+ E+
Sbjct: 53 NDGTYHMKALLRGEASQKALSQNLKRGDIFRVVTGEPAVIKEKKKFVLIIDDFEITKRDA 112
Query: 107 EMEIKIEVKS-----------DESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQIL 155
++ E + G+ + + G G + P Q + +S Q+
Sbjct: 113 DVNAHTEFIDAYFAAHPNEVVNLEGVGNEGQDMSPSPTLGSGALGNPVQSVHRQSEVQL- 171
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
Q N ++ + + L+PYQ WTIK RV+ KG+++T+ N RGEG +FNV
Sbjct: 172 --QQSNQFSGNESQKSKPIFAIEQLSPYQNMWTIKARVSFKGDIKTWHNQRGEGKLFNVN 229
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
D G +I+AT FN+ A K+++ Q GKVYY+S+ ++ + QF +++ YE+ L+ ++
Sbjct: 230 FLDTSG-EIRATAFNDNAMKYFEILQEGKVYYVSKARIQPSKPQFSNLKHPYELQLDRDT 288
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
VEE T +P+ F+FV +D L + VD++G++Q V+P + KS +
Sbjct: 289 VVEECFEATD-VPKMNFSFVKLDHLSS-MEANSSVDVLGIIQTVNPPFEMTAKSGKKF-N 345
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
+RDI + D+T +++V LWNE A + N + ++A+KS +V DF G SLS
Sbjct: 346 RRDIVIVDDTGYSISVGLWNEQAVDF------NLPEGSVIAVKSARVTDFAGKSLSMGFS 399
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
ST+ +PD+PEA +K WY ++G T+ S+ + G ++GA ++R+++
Sbjct: 400 STLHPNPDIPEAYAIKGWYNAKGSETNFHSLKTEAG---ESGAVKFIANRITIGRAKEEN 456
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECS 513
EK +F++K I+ +K D Y AC + C KKV + + CE CQ +
Sbjct: 457 LGRSEKGDYFNVKGAINFLKVDN-FAYPACSSEGCQKKVIEQTDGTWRCEKCQVDHPNPK 515
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RY++ + D + + W+++FN++AE+++G A+ L +LK+ D +Q + V
Sbjct: 516 WRYMLTISILDETSQIWLTLFNDQAEKLLGMDANTLTKLKNT--DSEQFQRVTQSVQMNE 573
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ + YN E R R TV + P+ + ES+FL EE+SK
Sbjct: 574 FDFRIRAREDTYNEETRVRYTVVNLYPLRWKTESEFLAEELSK 616
>gi|296416099|ref|XP_002837718.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633601|emb|CAZ81909.1| unnamed protein product [Tuber melanosporum]
Length = 614
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 195/629 (31%), Positives = 318/629 (50%), Gaps = 45/629 (7%)
Query: 6 SPDAISTILSN--PSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLKAIL 57
+P A+ + P+PDS P ++QVL +K RY SD + ++++L
Sbjct: 7 TPGALQRVFEADIPTPDS---FPNPILQVLQIKSLAAQPGAPERYRVVFSDTQNFIQSML 63
Query: 58 PSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD 117
+ ++ V+ G+I+ ++L +Y N++ K +K LIV EV++ + E E S
Sbjct: 64 ATQATAHVLDGSIEKGCFVQLTNYQANKV--KDKKILIVIGLEVLTQYGKQEKIGEPVSL 121
Query: 118 ESGIIFKPKQEDEVK----KDGPGIVL---KPKQEMVAKSAAQILRDQNGNMAPAARLAM 170
E+ +P+ D + + +P + + Q A ++ +
Sbjct: 122 EASQ--RPQAPDRARAAQNEKASATSFYGNRPAPAPAEQRGVPARQAQPTTTARSSAPSA 179
Query: 171 TR-RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
TR ++P+ SL+PYQ WTI+ RVT K ++ ++N+ +G +FNV L DE G +++AT F
Sbjct: 180 TRPNIYPIESLSPYQNRWTIRARVTYKSPIKLWQNSNRDGRLFNVTLLDESG-EVRATGF 238
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
N+ FY+ Q G+VYYIS + A KQF + NDYE+ N+E+E+ + IP
Sbjct: 239 NDQVDSFYEVLQEGQVYYISNCKVNFAKKQFSNINNDYELAFERNTEIEKCNDVDDGIPM 298
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+FNFV EL + ++D+IGV++ V SI+ K+ + KRD+T+ D++ +V
Sbjct: 299 ARFNFVQFSEL-ESIQNDGIIDVIGVIKEVGEVASIQSKNTQKSYTKRDVTLVDKSGYSV 357
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
++ W + A + +L + IVA K +KV ++ G SLS L ST+ V+PD+ E+
Sbjct: 358 HITTWGKSAEDWETQLDE------IVAFKGVKVSEYGGRSLSMLHSSTMTVNPDIDESHA 411
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEKPVFFSIK 468
L+ WY+ +G+G + S +G ++ N +L+ I N +G E P F+ K
Sbjct: 412 LRGWYDGQGRGETFQSHHTGSSAVRTNDPYK------TLSQIRDENLGMG-EDPDIFTTK 464
Query: 469 AYISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDG 525
A I IK ++ Y AC T CNKKV + + G W CE C C RYIM D
Sbjct: 465 ATIVYIK-NENFSYPACLTPKCNKKVVE-IAEGQWKCEKCDITHPNCQHRYIMTISCSDA 522
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
G AW S F++ I+G +ADEL EL +Q G ++ + ++ R
Sbjct: 523 FGLAWFSCFDDVGIMIMGMTADELVELNNQSGGP-AFADAFLQANCKAYVFRCRAKMDVS 581
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++R R V APV+FA E+ L+ +I
Sbjct: 582 QGQQRVRYQVLNAAPVNFALEAHKLIGQI 610
>gi|380025907|ref|XP_003696705.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Apis florea]
Length = 601
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 188/619 (30%), Positives = 325/619 (52%), Gaps = 63/619 (10%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + V+Q+L K +G RY SDGK+ +L + L+S + + + +
Sbjct: 17 DVDKPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLNSMITDNILTEFSICQ 76
Query: 78 LLDYALNEI--PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG 135
+ YA++ + K ++ +++ + I ++V DE G E + D
Sbjct: 77 INRYAISMVNNAGKQKRVMVI-----------LNIDLKVSGDEVGHKIGNPTNAETEGDS 125
Query: 136 PGIVLKPKQEMVAKSA--AQILRDQ---------NGNMAPAARLAMTRRVHPLVSLNPYQ 184
KQ + +SA AQ + Q N NM ++ ++ P+V+L+PYQ
Sbjct: 126 -------KQAQIVQSAQSAQPVPQQQSNITNLKSNHNMQQSSTNNIS--TTPIVALSPYQ 176
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
W IK RV SK N+RT+ N+RGEG +F+++L DE G +I+ T F KFYD ++GK
Sbjct: 177 NRWVIKARVVSKSNIRTWSNSRGEGKLFSMDLIDESG-EIRCTAFRNECDKFYDMLEIGK 235
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
VYYISR TL+ ANKQF ++NDYEM L +SE+ + IP +F+FV I+++ +
Sbjct: 236 VYYISRATLKPANKQFNNLKNDYEMTLIGDSEIIPCHDSGDDIPSLQFDFVSINDINKK- 294
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
+++DI+G+V+N + +++ + KRD+ + DE+ VT++LW A E
Sbjct: 295 EQNDIMDILGIVKNSGDLQILTSRNSGRELKKRDVNLVDESNTMVTLTLWGSQA-----E 349
Query: 365 LLDNADKSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM 423
D + +P++A+K ++ +F G +LSTL + + + PDLP A +L+ W+ + G+
Sbjct: 350 EFDGS-SNPVLAVKGARITEFNGGKNLSTLSSTVLQIDPDLPAAHRLRGWFNTMGRNEEA 408
Query: 424 ASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYR 483
S+ GS G ++ ++ + LG + +++KA +++I+ + A+ Y+
Sbjct: 409 TSLSKPFGSTT--GVSELW---ITFQE-AKDMELGYKNSDIYTVKATLNMIRMENAI-YK 461
Query: 484 AC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV--CDGSGEAWISIFNEEAE 539
AC + C KK+ D Y CE C K E + RY ++A + D + WI+ FN+EAE
Sbjct: 462 ACPSENCKKKLVDQANDMYRCEKCDK--EYPNYRYRLLANISLADWTDNQWITAFNDEAE 519
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
+I+ +A EL ELK D ++Y K E T+ + ++ V + + +E R R T V+
Sbjct: 520 KILSSTAQELGELKEN--DIDAYSEKFSEATFKSFIFKIRVKVEVFGDENRLRATCLGVS 577
Query: 600 PVDFAAESKFLLEEISKKV 618
P+D+ + L+ +I + V
Sbjct: 578 PMDYKLYNNHLITQIKELV 596
>gi|342877980|gb|EGU79393.1| hypothetical protein FOXB_10069 [Fusarium oxysporum Fo5176]
Length = 608
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 315/622 (50%), Gaps = 36/622 (5%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKAILP 58
+S A+ I ++P +S P V+Q L +K G+R+ SDG+ ++ +L
Sbjct: 7 LSRGALDVIFNDPDK-ASKLFPVPVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYVQTMLA 65
Query: 59 SNLSSEVISGNIQNKGLI-RLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD 117
+ ++ V+ N +G I R+ Y N + K + L++ EV+ +L ++ KI +
Sbjct: 66 TQ-ANHVVHDNKLVRGCIARIKQYTPNNL--KGKNILVILDIEVIE-SLGVQEKI---GE 118
Query: 118 ESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPL 177
+ KP ++ G +K ++ Q + Q+ PA + ++P+
Sbjct: 119 PFAVDSKPAAQEGAIAGGDFYGVKKEESKTQPQQFQQQQQQSMPSRPA--MHAGSNIYPI 176
Query: 178 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
L+P+ WTIK RVTSK +++T+ A GEG +F+V L DE G +I+AT FN+ FY
Sbjct: 177 EGLSPFAHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLDESG-EIKATGFNDQCDAFY 235
Query: 238 DRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
DR Q G VYYIS + +A KQF + NDYE+ ++ +E+A ++T +PQ +FNF
Sbjct: 236 DRLQEGSVYYISTPCRVALAKKQFSNLPNDYELTFERDTVIEKAEDQTN-VPQVRFNFCS 294
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I EL + V VD+IGV++ V I K + KR++T+ D+T +V V++W +
Sbjct: 295 IQEL-QSVEKDNTVDVIGVLKEVGEVGDITSKKDGRPFQKRELTLVDDTGFSVRVTIWGK 353
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A + +A +VA K KV DF G SLS L T+ V PD+P+A +LK WY+S
Sbjct: 354 SANSF------DAPPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYDS 407
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP 476
G+ + A+ ++A G + + + + + +LG + +++IKA I +K
Sbjct: 408 AGRNDTFAT----HQNMASMGNATGRKEDLKIISQVKDENLGMDDQAYYTIKATIVFVKQ 463
Query: 477 DQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
+ Y AC + CNKKVT + CE C + E+ RYI+ V D + W+S F
Sbjct: 464 EN-FCYPACLSQGCNKKVTQMPDGTWHCEKCAISHEKPEYRYILSLNVADHTSHQWLSCF 522
Query: 535 NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
++ +I+G +ADE+ ELK DDN + +E R + +R R
Sbjct: 523 DDSGRQIVGRTADEMMELKEN--DDNKFMAAFEEANCKKFTFRCRAKMDNFGEAQRIRYQ 580
Query: 595 VRAVAPVDFAAESKFLLEEISK 616
V V P+DF +E L E I +
Sbjct: 581 VMTVTPLDFKSEGIKLDELIKQ 602
>gi|302913119|ref|XP_003050848.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731786|gb|EEU45135.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 611
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 310/620 (50%), Gaps = 33/620 (5%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKAILP 58
+S A+ I ++P ++ P V+Q L +K G RY SDG+ ++ +L
Sbjct: 7 LSRGALDVIFNDPDK-AAKLFPVPVLQCLQVKQMAPSAQGGERYRLVMSDGQHYVQTMLA 65
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
+ + V + R+ Y N + K + L++ EVV +L ++ KI +
Sbjct: 66 TQANHVVRDNKLVRGCFARIKQYTPNNL--KGKNILVILDLEVVE-SLGIQDKI---GEP 119
Query: 119 SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLV 178
+ KP ++ G +K +++ Q + Q +M + ++P+
Sbjct: 120 VAVDAKPPGQEGAIAGGDFYGVKKEEQKPQPQQFQQQQQQQQSMPSRPAMHGGSNIYPIE 179
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
L+P+ WTIK RVTSK +++T+ A GEG +F+V L DE G +I+AT FNE FYD
Sbjct: 180 GLSPFAHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLDESG-EIKATGFNEQCDAFYD 238
Query: 239 RFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
R Q G VYYIS + +A KQF + NDYE+ ++ +E+A ++T +PQ +FNF I
Sbjct: 239 RLQEGSVYYISTPCRVSLAKKQFSNLPNDYELAFERDTVIEKAEDQTN-VPQVRFNFCTI 297
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
EL + V VD+IGV++ V I K + KR++T+ D+T +V V++W +
Sbjct: 298 QEL-QSVEKDNTVDVIGVLKEVGEIGEIVSKKDGRPFQKRELTLVDDTGYSVRVTVWGKT 356
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
A + +A +VA K KV DF G SLS L T+ V PD+ +A +LK WY+S
Sbjct: 357 ANSF------DAPAESVVAFKGTKVSDFGGKSLSLLSSGTMSVDPDIADAHRLKGWYDSA 410
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
G+ + A+ G+ S+ R D + + +LG + +++IKA I +K D
Sbjct: 411 GRTDTFAT-HQGMASMGNATGRK---DEIKTISQVKDENLGMDDQAYYTIKATIVFMKQD 466
Query: 478 QAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
Y AC + CNKKVT+ +G G W CE C + E+ RYI+ V D + W+S F
Sbjct: 467 -TFCYPACASQGCNKKVTE-MGDGTWHCEKCNVSHEKPEYRYILSLNVADHTSHQWLSCF 524
Query: 535 NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
++ ++I+G +A+E+ ELK + D + +E R + +R R
Sbjct: 525 DDSGQKILGRTANEMMELK-ESDDPTKFTAAFEEANCKKLTFRCRAKMDNFGEAQRIRYQ 583
Query: 595 VRAVAPVDFAAESKFLLEEI 614
V + P+DF +E L E I
Sbjct: 584 VMSAMPLDFTSEGNKLKEMI 603
>gi|395536318|ref|XP_003770167.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Sarcophilus harrisii]
Length = 607
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 308/614 (50%), Gaps = 44/614 (7%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG + + +L + L+ V + + + ++ Y
Sbjct: 11 ILQVINIRPIATGNSPPRYRMLMSDGLNTVSSFMLATQLNVLVEEERLSSNCICQVNRYI 70
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKI--EVKSDESGIIFKPKQEDEVKKDGPGIVL 140
+N + K +I+ EV+ A E+ KI V +E + +
Sbjct: 71 VNTLKF-GRKVVILMDLEVLQSADEVGGKIGNPVPYNEGQGQQQAAPAPAPGPAANPVAT 129
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPAARLAMTR---------RVHPLVSLNPYQGNWTIKV 191
KP+Q+ + G ++ T +V P+ SLNPYQ WTI
Sbjct: 130 KPQQQNGSSGLGSTATKSYGVSKTFGKVGSTNLSTPGGSQLKVVPIASLNPYQSKWTICA 189
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RVT+K +RT+ N+RGEG +F++E+ DE G +I+AT FN+ KF+ + KVYY S+G
Sbjct: 190 RVTNKSQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNDQVDKFFPLIDVNKVYYFSKG 248
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
TL++ANKQF V+NDYEM N + V + +P +F+F I +L + LVD
Sbjct: 249 TLKIANKQFTAVKNDYEMTFNNETSVV-LCEDAHHLPTVQFDFTVIGDLENKAKDS-LVD 306
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
IIGV ++ + KS+N V KR+I + D + + VT +LW E A + +
Sbjct: 307 IIGVCKSYEDASKVVVKSSNREVSKRNIHLMDTSGKVVTTTLWGEEADRF------DGSR 360
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI----G 427
P++AIK +V DF G SLS L ST+LV+PD+PEA KL+ W++SEG+ SI G
Sbjct: 361 QPVLAIKGARVSDFGGRSLSVLSSSTMLVNPDIPEAFKLRGWFDSEGQALEAVSISDARG 420
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC-- 485
G G N +++Y + + N GD K +FS A + ++ + M Y+AC
Sbjct: 421 GGTGGSNAN-WKTLYDVK------SENLGQGD-KADYFSCVATVVYLRKENCM-YQACPS 471
Query: 486 KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS 545
+ CNKKV D Y CE C + R I+ + D W++ F E AE I+G +
Sbjct: 472 QDCNKKVIDQQNGLYRCEKCDREFPSFKYRMILSVNIADFQENQWVTCFQESAEAILGQN 531
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
L ELK + ++ +++ + + + ++ V + YN+E R + +V V PVD+
Sbjct: 532 TAYLGELKDK--NEQAFEEVFQNANFRSYTFKIRVKLETYNDESRIKASVVDVKPVDYRE 589
Query: 606 ESKFLLEEISKKVS 619
K L+ I K +
Sbjct: 590 YGKRLIMNIRKNAA 603
>gi|336367309|gb|EGN95654.1| hypothetical protein SERLA73DRAFT_186799 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380027|gb|EGO21181.1| hypothetical protein SERLADRAFT_476039 [Serpula lacrymans var.
lacrymans S7.9]
Length = 601
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 257/451 (56%), Gaps = 23/451 (5%)
Query: 165 AARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
AA+ ++P+ L+PYQ NWTIK RVT K +RT+ N RGEG +FNV L DE G +I
Sbjct: 159 AAKGGRQNSIYPIEGLSPYQNNWTIKARVTQKSEIRTWSNQRGEGKLFNVTLMDESG-EI 217
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
+AT FN + Y++ + GKVY IS+ + +A K+F VQNDYE++L +++EVEE + ET
Sbjct: 218 RATGFNAVVDELYEKLEEGKVYLISKARVNLAKKKFSNVQNDYELSLEKHTEVEECL-ET 276
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
+ +P K+NF+ + EL + D+ +V+ V P I K+ N +PKR++T+ D+
Sbjct: 277 SGLPMIKYNFISLSELEAQPKDS-TCDVAAIVKEVGPLGEIVSKT-NRTIPKRELTIVDK 334
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+ +V ++LW + A N++ P++A K +KVGDF G SLS + S + + PD+
Sbjct: 335 SGFSVRLTLWGKQAEQY------NSEGHPVIAFKGVKVGDFGGRSLSMISTSMMSIDPDI 388
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS--NPSLG-DEK 461
E+ L+ WY+S G + S + S+ G +++ +R + H++ LG +K
Sbjct: 389 DESHLLRGWYDSIGVEQAFQSHSNANSSM---GMSTVF-NRSEMRHLSDVKESQLGMSDK 444
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
FFS ++ I IK + + Y AC T CNKKVTD +G G+ CE C+K E RYI+
Sbjct: 445 TDFFSCRSTIMHIKGEN-ISYPACPTQGCNKKVTD-IGDGWRCEKCEKTFERPEHRYIIS 502
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
V D S +AW+ FN+ + G SAD+L E+K + D+ Y + + +
Sbjct: 503 LAVADWSTQAWLQGFNDAGVAVFGKSADDLMEIKER--DEAEYNTVMAKASGATFNFTCR 560
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
Q YN++ R R + + PVD+ E+K+L
Sbjct: 561 AKQDTYNDQTRVRYGIVKLNPVDYREEAKYL 591
>gi|147901418|ref|NP_001081585.1| replication protein A 70 kDa DNA-binding subunit [Xenopus laevis]
gi|400975|sp|Q01588.1|RFA1_XENLA RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein
gi|65066|emb|CAA47665.1| replication protein A (RPA) [Xenopus laevis]
Length = 609
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 255/454 (56%), Gaps = 26/454 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WT++ RVT+KG +RT+ N+RGEG +F++E+ DE G +I+AT FNE
Sbjct: 174 KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNEQ 232
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ ++ KVYY S+GTL++ANKQ+ +V+NDYEM N + V +++A +P +F
Sbjct: 233 ADKFFSIIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSV-IPCDDSADVPMVQF 291
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
FV I EL N ++DIIGV +NV + KSNN V KR I + D + + V+ +
Sbjct: 292 EFVSIGEL-ESKNKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTT 350
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P+VAIK ++ DF G SLS L STV+++PD+PEA KL++
Sbjct: 351 LWGEDADKF------DGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRA 404
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIK 468
W++SEG+ GTS++ G +S+ N +LG EK +F+
Sbjct: 405 WFDSEGQVVEGTSISESRGGGTGGGNTNWKSLLE--------VKNENLGHGEKADYFTSV 456
Query: 469 AYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
A I ++ + + Y+AC + CNKKV D + CE C K R I+ A + D
Sbjct: 457 ATIVYLRKENCL-YQACPSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFG 515
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
WI+ F E AE I+G +A L ELK + ++ +Y + + + R V + YN
Sbjct: 516 ENQWITCFQESAESILGQNATYLGELKEK--NEQAYDEVFQNANFRSYTFRARVKLETYN 573
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
+E R + T V PVD S+ L+ I K +
Sbjct: 574 DESRIKATAVDVKPVDHKEYSRRLIMNIRKMATQ 607
>gi|47122884|gb|AAH70559.1| LOC397937 protein [Xenopus laevis]
Length = 607
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 255/454 (56%), Gaps = 26/454 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WT++ RVT+KG +RT+ N+RGEG +F++E+ DE G +I+AT FNE
Sbjct: 172 KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNEQ 230
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ ++ KVYY S+GTL++ANKQ+ +V+NDYEM N + V +++A +P +F
Sbjct: 231 ADKFFSIIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSV-IPCDDSADVPMVQF 289
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
FV I EL N ++DIIGV +NV + KSNN V KR I + D + + V+ +
Sbjct: 290 EFVSIGEL-ESKNKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTT 348
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P+VAIK ++ DF G SLS L STV+++PD+PEA KL++
Sbjct: 349 LWGEDADKF------DGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRA 402
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIK 468
W++SEG+ GTS++ G +S+ N +LG EK +F+
Sbjct: 403 WFDSEGQVVEGTSISESRGGGTGGGNTNWKSLLE--------VKNENLGHGEKADYFTSV 454
Query: 469 AYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
A I ++ + + Y+AC + CNKKV D + CE C K R I+ A + D
Sbjct: 455 ATIVYLRKENCL-YQACPSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYRLILSANIADFG 513
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
WI+ F E AE I+G +A L ELK + ++ +Y + + + R V + YN
Sbjct: 514 ENQWITCFQESAESILGQNATYLGELKEK--NEQAYDEVFQNANFRSYTFRARVKLETYN 571
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
+E R + T V PVD S+ L+ I K +
Sbjct: 572 DESRIKATAVDVKPVDHKEYSRRLIMNIRKMATQ 605
>gi|348505238|ref|XP_003440168.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oreochromis niloticus]
Length = 606
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 319/622 (51%), Gaps = 54/622 (8%)
Query: 23 SDIPEIVVQVLDL-KLTG----NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIR 77
+ + + V+Q++++ KL G +R+ SDG+ L + + S + + NI I
Sbjct: 16 TSVSDAVLQLVNIRKLDGGNGPSRFRVMMSDGRHTLSSFMLSTQLNHMAEENILAPNCIC 75
Query: 78 LLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPG 137
L + I + +I+ + +V+ PA D +G I P E + GP
Sbjct: 76 NLKRHVTNILKDGRRVVIILEIDVIKPA----------KDVAGRIGDPTPYTEGQSKGPQ 125
Query: 138 IV----LKPKQEMVAKSAAQILRDQN------GNMAPAA---RLAMTRRVHPLVSLNPYQ 184
++P + ++ ++ + + G AP+ + +V P+ SLNPYQ
Sbjct: 126 SAPVPEIRPPLQPQNRNEGELWQPPSSSAQDFGKKAPSVMPNTPGGSSKVVPIASLNPYQ 185
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
WTI+ RVT+K +RT+ N+RG+G +F++E+ DE G +I+ T FN+ KF+ + GK
Sbjct: 186 SKWTIRARVTNKSAIRTWSNSRGDGKLFSMEIVDESG-EIRVTGFNQEVDKFFSLIEAGK 244
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
VYYIS+G+L++ANKQ+ +V+NDYEM LN S + ++ +P + +FV I +L
Sbjct: 245 VYYISKGSLKIANKQYTSVKNDYEMTLNGESTI-IPCEDSCDVPMVQCDFVSISDLENR- 302
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
+ +VD+IGV ++V + KSN E V KR +++ D + + VTV+LW E A E
Sbjct: 303 DKDAIVDVIGVCKSVDDITRLTTKSNRE-VSKRTLSLMDMSGKVVTVTLWGEEA-----E 356
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GT 421
D + + P++AIK K+ DF G SLS ST++++PD+PEA KL+ WY+ EG G
Sbjct: 357 KFDGSSQ-PVIAIKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHAMDGQ 415
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMW 481
S+ + G G G + + SL + + +K +++ A I ++ + +
Sbjct: 416 SLTEVKGGSG-----GGNTNWK---SLADVKTEHLGHGDKADYYTCVATIVFLRKENCL- 466
Query: 482 YRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
Y+AC + CNKKV D + CE C K R I+ A + D W++ F E AE
Sbjct: 467 YQACPSQDCNKKVVDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAE 526
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVA 599
I+G +A L +LK ++ ++ + + + R V + YN+E R + TV V
Sbjct: 527 AILGQNAAYLGQLKDS--NEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKATVMDVK 584
Query: 600 PVDFAAESKFLLEEISKKVSHQ 621
PVD SK L+ I K ++
Sbjct: 585 PVDHKEYSKRLILNIRKLAANH 606
>gi|307103509|gb|EFN51768.1| hypothetical protein CHLNCDRAFT_59111, partial [Chlorella
variabilis]
Length = 736
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 246/446 (55%), Gaps = 43/446 (9%)
Query: 169 AMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
A R + P+ +LNPY NW IK +V SKG+ R++ G VF+ E+ DE GT I+AT
Sbjct: 159 ATKRPLQPISALNPYNNNWAIKAKVVSKGSKRSFSR----GSVFSAEVVDEQGTTIEATF 214
Query: 229 FNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAF 286
+ EAA Y+ + GKVY RG ++ A+K++ V+NDY ++ + SE+E ++ T+
Sbjct: 215 WREAADHAYELLEEGKVYIFGRGNVKPADKRYSRVRNDYALHFDTASELESCADDIDTSK 274
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
+ K FVPI++L +V+ +VDI+GVV +V P S++RK++ + +RDIT+ D++
Sbjct: 275 M-HVKMEFVPIEQLAAFVDKKMMVDIVGVVMDVKPLGSVKRKTDQVELSRRDITLVDQSL 333
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
+TV +++W A G+E+ + ++P+VAI + LS+L RS VL++PD+PE
Sbjct: 334 KTVVLTMWGNAAEAAGREIEELVQQAPVVAITA---------CLSSLQRSAVLINPDVPE 384
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI-TSNPSLGDEKPVFF 465
A L+ WY+S G+G +M+ +G GL + K+ S +R SL + P+ +KP +
Sbjct: 385 AVALRQWYDSSGRGAAMSHVGEGLATALKHSGSSAGQERASLELFRAAAPATTQDKPHYS 444
Query: 466 SIKAYISLIKPDQAMWYRA-----------------------CKTCNKKVTDALGSGYWC 502
++ A +++ PDQA++Y A C C V G Y+C
Sbjct: 445 TVTATFAMVNPDQALFYMANPENNRKASTTAPRLCPGFMGLLCALCVLVVEQGPGQ-YFC 503
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E RYI A+V D SGE + +FNE+AE+++ ADEL EL+ D +
Sbjct: 504 EYDGTTLSSMVRRYIFNAKVMDVSGECSVQVFNEQAEQLLEMKADELAELRET--DAKQF 561
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYNNE 588
Q LK V W ++LR+ Q + +
Sbjct: 562 QEVLKSVLWKDNVLRLKAQAQCFEED 587
>gi|256070189|ref|XP_002571426.1| replication factor A 1 rfa1 [Schistosoma mansoni]
Length = 555
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 257/454 (56%), Gaps = 23/454 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
RV P+ SLNPYQ WTI+ RV+ K +RT+ +G +FN L DE G +I+ T FN
Sbjct: 106 RVFPIQSLNPYQNRWTIRARVSQKSAIRTWSKQGRDGKLFNFTLVDESG-EIRVTGFNAE 164
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTK 291
KFYD ++ KVYY+SR L+ ANKQF T NDYEM L+ +S+V + +T+ +P+T
Sbjct: 165 VDKFYDMIEVNKVYYVSRANLKAANKQFNTTNNDYEMTLHSDSQVLPCEDSDTSSLPETH 224
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
FNF+ I +L G+ VDI+GVV SI K++ + KR++ + D + V +
Sbjct: 225 FNFISIGKLDTQSPGS-FVDIVGVVHECGEVQSITAKASQRELRKRELGLVDSSNCLVRL 283
Query: 352 SLWNELATN-VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKK 409
+LW E A N VG P++ IK+ K+ DF G SLS S++L+SP ++PEA +
Sbjct: 284 TLWGEEAENFVGA-------SHPVIVIKAAKISDFNGRSLSVSPTSSLLISPTNIPEAIR 336
Query: 410 LKSWYESEGKGTSMAS-----IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
LK WYE EG+ ++ + +GS G+ + + + L + ++ + K +
Sbjct: 337 LKGWYEHEGRFSNFETFRSEMVGSSGGADGVSSSSGVLGGWNLLQDVKASGVGANVKADY 396
Query: 465 FSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSG-YWCEGCQKNDEECSLRYIMVAR 521
F+ KA + +K + M Y+AC T CNKKV D LG+G Y CE C + +C R +++A+
Sbjct: 397 FTCKATVVFMKKENFM-YQACSTEGCNKKVID-LGNGLYRCEKCARETPDCKWRLLLMAK 454
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
+ D +G+ W++ F + AE ++G +A++L +KS D+ + E + + R+
Sbjct: 455 IADITGDLWVTCFQDAAEVLLGQTAEKLGTIKST-QDETQLEKVFIESAFNSWIFRLRAK 513
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
YN+E+R RV V V PVD S+ LL+ I+
Sbjct: 514 VDRYNDEERLRVVVADVKPVDLVDYSRRLLKAIN 547
>gi|343428808|emb|CBQ72353.1| probable replication factor-A protein 1 [Sporisorium reilianum
SRZ2]
Length = 633
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 198/655 (30%), Positives = 330/655 (50%), Gaps = 76/655 (11%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL----------TGNRYMFNASDGKKRLK 54
+S AI+ ++ P SS P V Q+L +K G+RY SDG +
Sbjct: 6 LSQGAIAQMIQTADPASSVQNP--VCQILSIKKIQATAASASNVGDRYRIIVSDGVHYAQ 63
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
A+L S S V SG ++ IR+ YA N + ++ + LI+ L++E+ +
Sbjct: 64 AMLASQKRSMVESGELEKNCFIRVSQYASNSV--QNRRILIL---------LDLEVVHKP 112
Query: 115 KSDESGIIFKPKQEDE-VKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAAR------ 167
+D G P D+ VK +G V K E+ A+ + GN A R
Sbjct: 113 TADRLG---NPTNVDDFVKTEGARGV---KHEL-GGGASALGNSALGNNPSAGRTTPATS 165
Query: 168 ---------------------LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNAR 206
+ ++P+ L+PYQ WTIK RVTSK ++R + NAR
Sbjct: 166 AMGGAGAAAKVGASGRPGGSSVHAGMPIYPIEGLSPYQNRWTIKARVTSKSDIRHWSNAR 225
Query: 207 GEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQND 266
G+G +F+V L D+ G +I+AT FN+A +F+ Q VY IS+ + +A KQF +QN+
Sbjct: 226 GDGKLFSVNLLDDSG-EIKATGFNDAVDRFHPLLQENHVYLISKARVNIAKKQFSNLQNE 284
Query: 267 YEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIR 326
YE+ ++E+EE + T +P+ K+ FV I+EL V + D+IG++ + I
Sbjct: 285 YEITFENSTEIEECTDATD-VPEVKYEFVRINEL-ESVEPNQTCDVIGILDSYGELSEIV 342
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA--DKSPIVAIKSLKVGD 384
K++ V KR++T+ D+ R+V ++LW + A + +NA D+ P++A K +KVGD
Sbjct: 343 SKASQRPVQKRELTLVDQGNRSVRLTLWGKNA----ETFPNNAGVDEKPVIAFKGVKVGD 398
Query: 385 FQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM--Y 442
F G SLS ST+L++PD+ E+ L+ W++++G + A +
Sbjct: 399 FGGRSLSMFSSSTMLINPDITESHVLRGWFDNDGAHAQFQPYTNAGVGGAGGAGGAGANL 458
Query: 443 SDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSG 499
++R ++ + + +LG EKP +F+++A + IK + ++Y AC + CNKKV+ +
Sbjct: 459 AERRTIVQV-KDENLGMSEKPDYFNVRATVVYIKQEN-LYYTACPSDGCNKKVSLNHENN 516
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
+ CE C ++ + RYI+ V D +G+ W+S FNE+A ++IG SA EL++L+ +
Sbjct: 517 WRCEKCDRSYPQPEYRYILSTNVADATGQIWLSGFNEDATKLIGMSAGELHQLRED--SE 574
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ + L + +N+ R R T+ APV+FA L+E I
Sbjct: 575 SEFNAVLHRAANRMYTFNCRAKMDTFNDTARVRYTISRAAPVEFAKAGAELVEAI 629
>gi|328788416|ref|XP_003251128.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
2 [Apis mellifera]
Length = 590
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 187/608 (30%), Positives = 325/608 (53%), Gaps = 52/608 (8%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + V+Q+L K +G RY SDGK+ +L + L+S + + + +
Sbjct: 17 DVDKPVLQILGHKKLSSSSSGERYRLLVSDGKRVNSFTMLATQLNSMITENILTEFSICQ 76
Query: 78 LLDYALNEI--PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG 135
+ YA++ + K ++ +++ + I ++V DE G K + DG
Sbjct: 77 INRYAISMVNNAGKQKRVMVI-----------LNIDLKVPGDEVG--HKIGNPTNAEADG 123
Query: 136 PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTS 195
KP Q +A+SA L+ N NM ++ ++ P+V+L+PYQ W IK RV S
Sbjct: 124 DS---KP-QAQIAQSAQTNLK-PNHNMQQSSTNNIS--TTPIVALSPYQNRWVIKARVVS 176
Query: 196 KGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRV 255
K N+RT+ N+RGEG +F+++L DE G +I+ T F KFYD ++GKVYYISR TL+
Sbjct: 177 KSNIRTWSNSRGEGKLFSMDLIDESG-EIRCTAFRNECDKFYDMLEIGKVYYISRATLKP 235
Query: 256 ANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGV 315
ANKQF ++NDYEM L +SE+ + IP +F+FV I+++ + ++++I+G+
Sbjct: 236 ANKQFNNLKNDYEMTLIGDSEIIPCHDSGDDIPSLQFDFVSINDINKK-EQNDIMNILGI 294
Query: 316 VQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIV 375
V+ + +++ + KRD+++ DE+ V VSLW A E D + +P++
Sbjct: 295 VKYSGDLQILTSRNSGRELRKRDVSLVDESNTMVKVSLWGSQA-----EEFDGS-SNPVL 348
Query: 376 AIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLA 434
A+K ++ +F G +LSTL + + + PDLP A +L+ W+ + G+ S+ GS
Sbjct: 349 AVKGARITEFNGGKNLSTLSSTVLQIDPDLPAAHRLRGWFNTMGRNEEATSLSKPFGSTT 408
Query: 435 KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKV 492
G ++ ++ + LG + +++KA +++I+ + A+ Y+AC + C KK+
Sbjct: 409 --GVSELW---ITFQE-AKDMELGYKNSDIYTVKATLNMIRMENAI-YKACPSENCKKKL 461
Query: 493 TDALGSGYWCEGCQKNDEECSLRYIMVARV--CDGSGEAWISIFNEEAERIIGCSADELN 550
D Y CE C K E + RY ++A + D + W++ FN+EAE+I+ +A EL
Sbjct: 462 VDQANDMYRCEKCDK--EYPNYRYRLLANISLADWTDNQWVTAFNDEAEKILSSTAQELG 519
Query: 551 ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
ELK D ++Y K E T+ + ++ V + + +E R R T V+P+D+ + L
Sbjct: 520 ELKEN--DIDAYSEKFSEATFKSFIFKIRVKVEVFGDENRLRATCLGVSPMDYKLYNNHL 577
Query: 611 LEEISKKV 618
+ +I + V
Sbjct: 578 ITQIKELV 585
>gi|383854350|ref|XP_003702684.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Megachile rotundata]
Length = 591
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/611 (29%), Positives = 314/611 (51%), Gaps = 65/611 (10%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + ++Q+L K +G RY SDGK+ +L + L+S + + + +
Sbjct: 17 DVEKPILQILGHKKLASSSSGERYRLLVSDGKRINSFTMLATQLNSMITDNILTEFSICQ 76
Query: 78 LLDYALNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI-IFKPKQEDEVKKD 134
+ YA++ + K ++ +++ + I ++V+ +E G I P +
Sbjct: 77 INRYAISMVHNAGKQKRVMVI-----------LNIDVKVRGNEVGHKIGNPTNAESESDS 125
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVT 194
P P Q+ ++ QN + + + ++ T P+V+L+PYQ W IK RV
Sbjct: 126 TPASAPAPPQQRNV-----LMPKQNTHQSSTSDISTT----PIVALSPYQNRWVIKARVL 176
Query: 195 SKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLR 254
SK ++RT+ N+RGEG +F+++L DE G +I+ T F + KFYD ++GKVYYISR TL+
Sbjct: 177 SKSDIRTWSNSRGEGKLFSMDLVDESG-EIRCTAFRDQCDKFYDMLEVGKVYYISRATLK 235
Query: 255 VANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
ANKQF ++NDYEM L ++E+ + IP +FNF PI ++ E +D+I
Sbjct: 236 TANKQFNHLKNDYEMTLTGDTEIIPCHDGGNEIPTLQFNFQPISDV-ETKEKNEYIDVIA 294
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
+V++ + + ++ + KRDI + D++ V +LW + A E D ++ +P+
Sbjct: 295 IVKSCADLQLLTSRNTGREMKKRDIFLVDQSSTMVCFTLWGKEA-----EEFDGSN-NPV 348
Query: 375 VAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS- 432
+A+K +VG+F G +LS+L + + ++PD+PEA +L W+ + G SI G
Sbjct: 349 IAVKGARVGEFNGGKNLSSLSSTVIQINPDIPEAHRLHGWFNATGHNEEAKSISRTFGGG 408
Query: 433 -------LAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC 485
L AR M LG + P + +KA I++I+ + A+ Y++C
Sbjct: 409 GNISGPWLTFKEAREM--------------ELGFKGPEMYMVKATINMIRIENAV-YKSC 453
Query: 486 --KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG 543
++C KK+ D Y CE C K R + + D + W + F+EEAE+I+G
Sbjct: 454 PSESCKKKLIDQANDMYRCEKCDKEYPNYRYRLLASLSLADWTDNQWATAFSEEAEKILG 513
Query: 544 CSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDF 603
+A EL EL Q D+++Y K + T+ L ++ V + +++E R + T AV P+D+
Sbjct: 514 ITAQELGEL--QENDNDAYLEKFADATFKSFLFKIRVKLETFSDENRLKATCVAVNPLDY 571
Query: 604 AAESKFLLEEI 614
+ L+ +I
Sbjct: 572 KLYNNHLITQI 582
>gi|365767235|gb|EHN08720.1| Rfa1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 621
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 313/590 (53%), Gaps = 39/590 (6%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 51 SDGIYHMKALLRNQAASKFQSMELQRGDIIRVI-IAEPAIVRERKKYVLLVDDFELVQSR 109
Query: 106 LEMEIKIEVKSDESGIIFKPKQEDEVKKD----GPGIVLKPKQEMVAKSAAQILRDQNGN 161
+M + D + + +E KD G V Q + + + N N
Sbjct: 110 ADMVNQTSTFLDN----YFSEHPNETLKDEDITDSGNV--ANQTNASNAGVPDMLHSNSN 163
Query: 162 MAPAAR--------LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ R TR + + L+PYQ WTIK RV+ KG ++T+ N RG+G +FN
Sbjct: 164 LNANERKFANENPNSQKTRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFN 223
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
V D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+
Sbjct: 224 VNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLXHPYELNLDR 282
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++ +EE +E+ +P+T FNF+ +D + + VN VD++G++Q ++P + ++ +
Sbjct: 283 DTVIEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPHFELTSRAGKK 339
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
+RDIT+ D++ +++V LWN+ A + N + + AIK ++V DF G SLS
Sbjct: 340 F-DRRDITIVDDSGFSISVGLWNQQALDF------NLPEGSVAAIKGVRVTDFGGKSLSM 392
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSDRVSLTH 450
ST++ +P++PEA LK WY+S+G+ + ++ G+G + + R+++
Sbjct: 393 GFSSTLIPNPEIPEAYALKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITIAR 452
Query: 451 ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKN 508
+ EK FFS+KA IS +K D Y AC + CNKKV + + CE C N
Sbjct: 453 AQAENLGRSEKGDFFSVKAAISFLKVDN-FAYPACSNENCNKKVLEQPDGTWRCEKCDTN 511
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N + +
Sbjct: 512 NARPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQS 569
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + R+ + YN++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 570 IQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYRAEADYLADELSKAL 619
>gi|50287931|ref|XP_446394.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525702|emb|CAG59321.1| unnamed protein product [Candida glabrata]
Length = 627
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 255/450 (56%), Gaps = 17/450 (3%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+R + + L+PYQ WTIK RV+ KG+++T+ N RGEG + NV D G +I+AT FN
Sbjct: 187 SRAIFAIEQLSPYQNVWTIKARVSYKGDIKTWHNQRGEGKLLNVNFLDTSG-EIRATAFN 245
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ A F + Q GKVYY+S+ L+ A QF + + YE+NL+ + +EE+ +E +P+T
Sbjct: 246 DNATAFNEILQEGKVYYVSKARLQPAKPQFTNLSHPYELNLDRETVIEESFDENN-VPKT 304
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
FNF+ +D + N + VD++G++Q V+P + ++ + +RDI + D++ ++
Sbjct: 305 HFNFIKLDNIQSQENNSN-VDVLGIIQTVNPHFELTSRAGKKF-DRRDIQIVDDSGFAIS 362
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
V LWN+ Q L N + +VAIK ++V DF G SLS ST++ +P++PEA KL
Sbjct: 363 VGLWNQ------QALDFNLPEGSVVAIKGVRVSDFGGKSLSMGFNSTLIANPEIPEAYKL 416
Query: 411 KSWYESEGKGTSMASI--GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
K WY+ +GK S+ +G G+ + S R+++ + +E+ FFS+K
Sbjct: 417 KGWYDQQGKDQDFTSLKQDAGAGTTSAANLAKFISQRITIARAEAENLGKNERGDFFSVK 476
Query: 469 AYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
A IS +K D Y AC + CNKKV + + CE C N+ RYI+ + D +
Sbjct: 477 AAISFMKVDN-FAYPACSNENCNKKVIEQPDGTWRCEKCDINNPSPRWRYILTISIIDET 535
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G W+++F+++A++++G A+ L LK D + + + V + R+ + YN
Sbjct: 536 GNLWLTLFDDQAKQLLGVDANTLMSLKE--NDPDEFTRTTQNVQMNQYDFRIRAREDNYN 593
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ R R TV + ++F AE+ +L +E++K
Sbjct: 594 DQTRIRYTVANLHKLNFKAEADYLADELTK 623
>gi|346471207|gb|AEO35448.1| hypothetical protein [Amblyomma maculatum]
Length = 604
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 191/635 (30%), Positives = 333/635 (52%), Gaps = 55/635 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL----TGNRYMFNASDGKK-RLKA 55
M+ ++ A+ IL+N D V+QVL+ K T +RY SDG + A
Sbjct: 1 MENRLTAGAVERILNNQQVDKP------VLQVLNFKPITSNTADRYRLLLSDGVQCHTYA 54
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + L+ + + I +++L +KY+ C VVSP ++ I +++
Sbjct: 55 MLGTQLNGMITNNEIDKFAVVQL------------DKYM----CNVVSPDKKVLIVLDLT 98
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILR----DQNGNMAPAARLAMT 171
G + + V + G V + Q + DQ+ +M R A
Sbjct: 99 VIAKGSAVGCRLGNPVIPNSTGGAPSAGSADVGANKTQFQQNGGHDQSSSMPSYGRAAYP 158
Query: 172 RR-----VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
V P+ SL PYQ WTI+ RVT+K +RT+ N++GEG +F+++L DE G +I+A
Sbjct: 159 ASTNDVVVVPIASLTPYQNRWTIRARVTNKSGIRTWSNSKGEGKLFSMDLLDESG-EIRA 217
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTLR--VANKQFKTVQNDYEMNLNENSEVEEAVNET 284
T FN + YD ++ KVYYISR ++ A F +++ND+EM+ + + +
Sbjct: 218 TAFNAECDRLYDIVEVNKVYYISRAVIKNIRAGYSFSSIKNDFEMSFIPETTITPCDDVV 277
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
IP +FNFVPI L + V+ ++D+IG+ + ++ R++ N+ + KRD+++ D
Sbjct: 278 PNIPTLQFNFVPISRL-QEVSKDSVIDVIGICKTAGDVTTVTRRNTNQELKKRDVSLVDR 336
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+ V++++W + A E D +D +P+VA+K +V DF G+SLS + S + V+PD+
Sbjct: 337 SGTEVSLTMWGDQA-----EKFDGSD-NPVVAVKGARVSDFSGVSLSLISSSMLQVNPDI 390
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
PE+ L WY EG S+ + G GA ++ +L + +KP +
Sbjct: 391 PESHALLGWYTKEGALLQTRSLSTRAG-----GAMGGNANWKTLAQAKAENLGQGDKPDY 445
Query: 465 FSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
+S+KA +S+I+ + + Y+AC + CNKKV D Y CE C + + R ++ A +
Sbjct: 446 YSVKACVSIIRKENCL-YKACPSENCNKKVVDLENGYYRCEKCARETMDFKWRLLVSANL 504
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLG-DDNSYQMKLKEVTWVPHLLRVSVA 581
D S W++ F +EAE++IG SA++L E+ S+ +D+ Y+ L EV + P + R+
Sbjct: 505 TDFSDGQWVTCFGKEAEQLIGASAEDLGEMYSKSSKEDSRYEDILNEVPFKPFIFRLRTK 564
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ +N+E R + +V +VAPV++ ++ LL++I++
Sbjct: 565 MEVFNDESRLKTSVMSVAPVNYVEYTQKLLKDIAE 599
>gi|207347969|gb|EDZ73967.1| YAR007Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270812|gb|EEU05961.1| Rfa1p [Saccharomyces cerevisiae JAY291]
gi|259144715|emb|CAY77656.1| Rfa1p [Saccharomyces cerevisiae EC1118]
gi|323310280|gb|EGA63470.1| Rfa1p [Saccharomyces cerevisiae FostersO]
gi|323334809|gb|EGA76181.1| Rfa1p [Saccharomyces cerevisiae AWRI796]
gi|323349907|gb|EGA84118.1| Rfa1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356339|gb|EGA88141.1| Rfa1p [Saccharomyces cerevisiae VL3]
gi|349576254|dbj|GAA21426.1| K7_Rfa1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 621
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 180/590 (30%), Positives = 313/590 (53%), Gaps = 39/590 (6%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 51 SDGIYHMKALLRNQAASKFQSMELQRGDIIRVI-IAEPAIVRERKKYVLLVDDFELVQSR 109
Query: 106 LEMEIKIEVKSDESGIIFKPKQEDEVKKD----GPGIVLKPKQEMVAKSAAQILRDQNGN 161
+M + D + + +E KD G V Q + + + N N
Sbjct: 110 ADMVNQTSTFLDN----YFSEHPNETLKDEDITDSGNV--ANQTNASNAGVPDMLHSNSN 163
Query: 162 MAPAAR--------LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ R TR + + L+PYQ WTIK RV+ KG ++T+ N RG+G +FN
Sbjct: 164 LNANERKFANENPNSQKTRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFN 223
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
V D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+
Sbjct: 224 VNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDR 282
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++ +EE +E+ +P+T FNF+ +D + + VN VD++G++Q ++P + ++ +
Sbjct: 283 DTVIEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPHFELTSRAGKK 339
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
+RDIT+ D++ +++V LWN+ Q L N + + AIK ++V DF G SLS
Sbjct: 340 F-DRRDITIVDDSGFSISVGLWNQ------QALDFNLPEGSVAAIKGVRVTDFGGKSLSM 392
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSDRVSLTH 450
ST++ +P++PEA LK WY+S+G+ + ++ G+G + + R+++
Sbjct: 393 GFSSTLIPNPEIPEAYALKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITIAR 452
Query: 451 ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKN 508
+ EK FFS+KA IS +K D Y AC + CNKKV + + CE C N
Sbjct: 453 AQAENLGRSEKGDFFSVKAAISFLKVDN-FAYPACSNENCNKKVLEQPDGTWRCEKCDTN 511
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N + +
Sbjct: 512 NARPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQS 569
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + R+ + YN++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 570 IQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYRAEADYLADELSKAL 619
>gi|6319321|ref|NP_009404.1| Rfa1p [Saccharomyces cerevisiae S288c]
gi|132473|sp|P22336.1|RFA1_YEAST RecName: Full=Replication factor A protein 1; Short=RF-A protein 1;
AltName: Full=DNA-binding protein BUF2; AltName:
Full=Replication protein A 69 kDa DNA-binding subunit;
AltName: Full=Single-stranded DNA-binding protein
gi|4312|emb|CAA42420.1| replication factor-A protein 1 [Saccharomyces cerevisiae]
gi|172466|gb|AAA34994.1| single stranded DNA binding protein [Saccharomyces cerevisiae]
gi|349752|gb|AAC04960.1| Rfa1p: Subunit of replication factor RF-A [Saccharomyces
cerevisiae]
gi|410541|gb|AAB27889.1| BUF2 [Saccharomyces cerevisiae]
gi|151941394|gb|EDN59765.1| RF-A [Saccharomyces cerevisiae YJM789]
gi|285810203|tpg|DAA06989.1| TPA: Rfa1p [Saccharomyces cerevisiae S288c]
gi|392301278|gb|EIW12366.1| Rfa1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 621
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 180/590 (30%), Positives = 313/590 (53%), Gaps = 39/590 (6%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 51 SDGIYHMKALLRNQAASKFQSMELQRGDIIRVI-IAEPAIVRERKKYVLLVDDFELVQSR 109
Query: 106 LEMEIKIEVKSDESGIIFKPKQEDEVKKD----GPGIVLKPKQEMVAKSAAQILRDQNGN 161
+M + D + + +E KD G V Q + + + N N
Sbjct: 110 ADMVNQTSTFLDN----YFSEHPNETLKDEDITDSGNV--ANQTNASNAGVPDMLHSNSN 163
Query: 162 MAPAAR--------LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ R TR + + L+PYQ WTIK RV+ KG ++T+ N RG+G +FN
Sbjct: 164 LNANERKFANENPNSQKTRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFN 223
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
V D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+
Sbjct: 224 VNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDR 282
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++ +EE +E+ +P+T FNF+ +D + + VN VD++G++Q ++P + ++ +
Sbjct: 283 DTVIEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPHFELTSRAGKK 339
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
+RDIT+ D++ +++V LWN+ Q L N + + AIK ++V DF G SLS
Sbjct: 340 F-DRRDITIVDDSGFSISVGLWNQ------QALDFNLPEGSVAAIKGVRVTDFGGKSLSM 392
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSDRVSLTH 450
ST++ +P++PEA LK WY+S+G+ + ++ G+G + + R+++
Sbjct: 393 GFSSTLIPNPEIPEAYALKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITIAR 452
Query: 451 ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKN 508
+ EK FFS+KA IS +K D Y AC + CNKKV + + CE C N
Sbjct: 453 AQAENLGRSEKGDFFSVKAAISFLKVDN-FAYPACSNENCNKKVLEQPDGTWRCEKCDTN 511
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N + +
Sbjct: 512 NARPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQS 569
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + R+ + YN++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 570 IQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYRAEADYLADELSKAL 619
>gi|357603407|gb|EHJ63750.1| replication protein A1 [Danaus plexippus]
Length = 598
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 319/624 (51%), Gaps = 44/624 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG----NRYMFNASDGKKRLK-A 55
M ++S A+ I+S D V+QVL K +R SDGK A
Sbjct: 1 MSYSLSEGAVEIIMSGGEYDGP------VIQVLGHKKIQSRGEDRIRLIVSDGKHSHSLA 54
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEK-YLIVTKCEVVSPALEMEIKIEV 114
+L S L+++V SG + N +I++ Y ++ + K EK +++ +++P E+ K+
Sbjct: 55 LLNSQLNNKVFSGELSNYSVIKVDKYFISSVQKKEEKRVMVILNLTIIAPGAEVGKKLGD 114
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRV 174
S + P K + P V P + +K+ A I N N + + ++
Sbjct: 115 PIQWSEDMTSPSYASTTKAE-PKPVPTPMSNL-SKTTAGI----NLN----SSVLSSQMT 164
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
HP+ SL+PYQ W IK RV +K +RT+ NA+GEG +F+++L DE G +I+AT F
Sbjct: 165 HPIASLSPYQNKWVIKARVMNKTAIRTWSNAKGEGKLFSMDLCDESG-EIRATAFKNECD 223
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
KFYD Q+ KVYYISR L+ ANKQ+ T++NDYEM ++ V E + E+ +P K++F
Sbjct: 224 KFYDMIQIDKVYYISRCQLKTANKQYTTLKNDYEMTFTADTVVSECMEESNSVPSIKYDF 283
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+PI ++ T ++D+IGV ++ S + KS +++ KR+ T+ D + +T++LW
Sbjct: 284 MPISDIADKGPDT-ILDVIGVCKSASDIQELTAKSTGKLLKKREATLVDSSGGAITLTLW 342
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSW 413
A E D + +P+VA+K ++ +F G SLS L + V V PD+ EA +L+ W
Sbjct: 343 GAEA-----EKFDGS-SNPVVAVKGARLAEFNGSKSLSCLASTIVRVQPDVEEAHRLRGW 396
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYIS 472
Y++ G +M I + +G N +++ LG +K +FS+ ++
Sbjct: 397 YDNGGDSMAMVHISARVGQGGGNAEWMTFAE-------AEERRLGTGDKADYFSLLGVLT 449
Query: 473 LIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
D A+ Y+AC + CNKK+ D Y CE C + R ++ A V D +G+
Sbjct: 450 FTFADNAV-YKACPQEQCNKKLVDQQNGLYRCEKCNREYPNYKYRLLLGATVSDPTGDQR 508
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
++ FNE AE ++G SA+E+ L D Y L V + + + + Y++E +
Sbjct: 509 VTAFNESAEVMLGRSAEEVGRLSDY--DKAEYGQLLDHVKFKTFVFKFRTKIETYSDEAK 566
Query: 591 QRVTVRAVAPVDFAAESKFLLEEI 614
+ V + PVD+ + L++ I
Sbjct: 567 LKTVVMSAQPVDYRDANARLVKSI 590
>gi|365762222|gb|EHN03823.1| Rfa1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 311/596 (52%), Gaps = 51/596 (8%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 91 SDGVYHMKALLRNQAASKFQSMELQRGDIIRVI-IAEPAIVRERKKYVLLVDDFELVQSR 149
Query: 106 LEM------------------EIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMV 147
EM +K E SD + + + G G +L +
Sbjct: 150 AEMVNQASTFLDNYFSERPNETLKDEDISDNGNVT----NQTNIGNLGVGDMLHSNSNLN 205
Query: 148 AKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
A + N +R + + L+PYQ WTIK RV+ KG ++T+ N RG
Sbjct: 206 ANEKKFVNEGSNSQK--------SRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRG 257
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
+G +FNV D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + Y
Sbjct: 258 DGKLFNVNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPY 316
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIR 326
E+NL+ ++ VEE +E+ +P+T FNF+ +D + + VN VD++G++Q ++P +
Sbjct: 317 ELNLDRDTVVEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPQFELT 373
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ 386
++ + +RDIT+ D++ +++V LWN+ Q L N + + AIK ++V DF
Sbjct: 374 SRAGKKF-DRRDITIVDDSGFSISVGLWNQ------QALDFNLPEGSVAAIKGVRVTDFG 426
Query: 387 GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSD 444
G SLS ST++ +P++PEA LK WY+S+G+ + ++ G+G + +
Sbjct: 427 GKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRNANFTTLKQEPGVGGQSAASLTKFIAQ 486
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWC 502
R+++ + EK FFS+KA IS +K D Y AC + CNKKV + + C
Sbjct: 487 RITIARAQAENLGRSEKGDFFSVKAAISFLKVDN-FAYPACSNENCNKKVLEQPDGTWRC 545
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E C N+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N +
Sbjct: 546 EKCDTNNASPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEF 603
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + + R+ + YN++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 604 TKITQSIQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYKAEADYLADELSKAL 659
>gi|403214488|emb|CCK68989.1| hypothetical protein KNAG_0B05560 [Kazachstania naganishii CBS
8797]
Length = 633
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 178/597 (29%), Positives = 303/597 (50%), Gaps = 45/597 (7%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG +K + + + + S +Q ++R+ + K+ ++V E+V
Sbjct: 51 SDGVYYMKMLFRNEAADKFQSQELQKGDIVRITAADAVSLKNKTRFVVLVDDFELVDAGK 110
Query: 107 EM-----------------EIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAK 149
E+ E+ E+K D+ P E+ G A
Sbjct: 111 ELVNPNSTFLNTYMAAHINELVPELKGDDEANDAHPAAENSTTTGISGTATNSG--AAAA 168
Query: 150 SAAQILRDQN----GNMAPAARLAMTRRVHPLVS---LNPYQGNWTIKVRVTSKGNMRTY 202
SA + Q+ GN PA + + P+ + L+PYQ WTIK RV+ KG ++T+
Sbjct: 169 SATNSMTGQSDRPLGN--PATSFGNSSKSKPIFAIEQLSPYQNVWTIKARVSFKGEIKTW 226
Query: 203 KNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKT 262
N RGEG +FNV D G +I+AT FN+ A K+Y+ Q GKVYY+S+ L+ A QF
Sbjct: 227 SNQRGEGKLFNVNFLDTSG-EIRATAFNDMATKYYEILQEGKVYYVSKARLQPAKPQFSN 285
Query: 263 VQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSP 321
+ + YE++L+ S VEE ++ +P+T FNF+ +D + + N T VD++G+++ V+
Sbjct: 286 LSHPYELSLDRESVVEECQDDIN-VPKTHFNFIKLDTVQNQEANST--VDVLGIIKTVND 342
Query: 322 TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLK 381
++ ++ + +RDI + D++ ++ V LWN LA N + +VAIK ++
Sbjct: 343 AFTLTSRAG-KTFDRRDIVLVDDSNSSINVGLWNTLAKEF------NMPEGSVVAIKGVR 395
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
V DF G SL+ S ++ +P++PEA LK WY+SEG + ++G A A
Sbjct: 396 VSDFGGKSLTMGFTSNLIPNPEIPEAYALKGWYDSEGHSANFTALGQDNVPGASPNAGKF 455
Query: 442 YSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSG 499
+ R+S+ ++ + +FSI+A IS +K D Y AC K CNKK +
Sbjct: 456 IAQRISIGKAIADNLGKSDAGDYFSIRAAISFLKVDN-FAYPACSNKDCNKKAIQSTDGT 514
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
+ CE C ++E+ RYI+ + D +G+ W+ +FNE+AE+++G SA +L +LK + D
Sbjct: 515 WRCEKCNTDNEKPEWRYILTLSIMDETGQLWVVLFNEQAEQLLGVSATKLTDLKEK--DP 572
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + + + R+ + YN++ R R +V + +++ AE+ FL E+SK
Sbjct: 573 KEFSRLTQNLQMNQYDFRIRAREDNYNDQTRIRYSVSNIHQLNYKAEADFLAAELSK 629
>gi|149053388|gb|EDM05205.1| replication protein A1 [Rattus norvegicus]
Length = 583
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 311/603 (51%), Gaps = 56/603 (9%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+QV++++ TGN RY SDG L + +L + L++ V G + + + ++ +
Sbjct: 24 VLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNALVEGGQLASNCVCQVHRFI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKI--EVKSDESGIIFKPKQEDEVKKDGPGIVL 140
+N + + +I+ EVV A E+ +KI V +E + K
Sbjct: 84 VNTLK-DGRRVVILMDLEVVKSAGEVGVKIGNPVPYNEGSTVAKAYGAS----------- 131
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMR 200
KP K A G + P + +V P+ SL PYQ WTI RVT+K +R
Sbjct: 132 KP----FGKPAG------TGLLQPTS--GTQSKVVPIASLTPYQSKWTICARVTNKSQIR 179
Query: 201 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQF 260
T+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GTL++ANKQF
Sbjct: 180 TWSNSRGEGKLFSIELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQF 238
Query: 261 KTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS 320
V+NDYEM N + V + +P +F+F I +L + LVDIIG+ ++
Sbjct: 239 SAVKNDYEMTFNNETSV-LPCEDGHHLPTVQFDFTGIGDL-ESKSKDSLVDIIGICKSYE 296
Query: 321 PTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL 380
I KSNN V KR+I + D + + VT +LW E A + + P++AIK
Sbjct: 297 DATKITVKSNNREVAKRNICLMDMSGKVVTATLWGEDADKF------DGSRQPVMAIKGA 350
Query: 381 KVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNG 437
+V DF G SLS L STVLV+PD+PEA KL+ W++SEG+ G S++ + SG +
Sbjct: 351 RVSDFGGRSLSVLSSSTVLVNPDIPEAYKLRGWFDSEGQALDGVSISDLRSGGTGGSNTN 410
Query: 438 ARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDA 495
+++Y + + N GD K +FS A + ++ + M Y+AC T CNKKV D
Sbjct: 411 WKTLYEAK------SENLGQGD-KADYFSTVATVVFLRKENCM-YQACPTQDCNKKVIDQ 462
Query: 496 LGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
Y CE C + R I+ + D W++ F E AE I+G + L ELK +
Sbjct: 463 QNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNTVYLGELKEK 522
Query: 556 LGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++ +++ + + R+ V + YN+E R + TV V PVD+ SK L+ I
Sbjct: 523 --NEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVIDVKPVDYRDYSKRLIMNIR 580
Query: 616 KKV 618
K +
Sbjct: 581 KNI 583
>gi|357484641|ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 263/466 (56%), Gaps = 22/466 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P R R+ P+ +LNPYQ WTIK RVT+KG +RTY N+RG+G VF+ +L D D
Sbjct: 256 NRGPTGRNDAPPRIIPISALNPYQNMWTIKARVTAKGELRTYTNSRGQGKVFSFDLLDSD 315
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
+I+AT FN A +FY+ ++GKVY +SRG+L+ A K F + ND E+ L+ S ++
Sbjct: 316 RGEIRATCFNTVAEQFYNVIEVGKVYLVSRGSLKPAQKNFNHLPNDQEITLDITSVIQPC 375
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
V++ + + Q +NF PI ++ N + +VD+I VV ++SPT SI RK+ E KR +
Sbjct: 376 VDDNSILQQI-YNFRPIGDIENMQNNS-IVDVIAVVTSISPTASIIRKNGTE-TQKRSLQ 432
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V +++W GQ+L + D PI+ +KS +V DF G S+ T+ S +
Sbjct: 433 LKDMSGRSVELTVWGSFCNTEGQKLQNICDSGEFPILVVKSARVNDFNGKSIGTIATSQL 492
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
LV PD PEA L+ W++ EG+ SI S K+ + S + +LG
Sbjct: 493 LVEPDFPEAFTLRGWFDQEGRNVPSQSISRESSSFGKSEVQKTISQ-------IKDENLG 545
Query: 459 -DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEE 511
+KP + SI A + K D +Y AC + CNKKVTD + CE C +
Sbjct: 546 TSDKPDWISICANVVFFKYDN-FYYTACPNMIGDRKCNKKVTDNGDKTWHCERCDTS-LS 603
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RY++ ++ D +G W++ F E E I+G A +L +K + D+ ++ + +V +
Sbjct: 604 CDYRYLLQMQIQDHTGMTWVTAFQEGGEDIMGMPAKDLFSVKFEEKDEEKFKEIISKVVF 663
Query: 572 VPHLLRVSVAQQEYNNEKRQRVT-VRAVAPVDFAAESKFLLEEISK 616
++ ++ V ++ +N+E R + T V+A V+FA+ESK LL+ I K
Sbjct: 664 TKYMFKLKVKEETFNDEARVKSTVVKAEKIVNFASESKSLLDLIDK 709
>gi|322799305|gb|EFZ20693.1| hypothetical protein SINV_03263 [Solenopsis invicta]
Length = 588
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/610 (30%), Positives = 307/610 (50%), Gaps = 55/610 (9%)
Query: 24 DIPEIVVQVLDLKL-------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNK-GL 75
DI + ++Q+L K +RY SDG+K + + + +I +I N+ +
Sbjct: 8 DIDKPILQMLGYKKLPKNKDGATDRYRLLVSDGEKLNSFTMLATQLNNLIEDDILNEFSI 67
Query: 76 IRLLDYALNEI--PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKK 133
++ +Y L+ + K ++ +++ EVV ++ G I P
Sbjct: 68 CKITNYHLSSVNNSGKEKRVMLILDIEVVVSGEKV----------GGRIGNPTN------ 111
Query: 134 DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH--PLVSLNPYQGNWTIKV 191
I LK + + + S +R QNG+ + +H P+ +L+PYQ W IK
Sbjct: 112 ----IELKSEPDTPSTSTTTTVRHQNGSTRTGNSNQASSDIHTTPIAALSPYQNRWVIKA 167
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RV +K ++T+ N+RGEG +F+++L DE G +I+ T F + KFYD G +YYISR
Sbjct: 168 RVINKSPIKTWSNSRGEGKLFSMDLIDESG-EIRCTAFRDVVDKFYDLIVTGNIYYISRC 226
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
L+ ANKQF T++NDYEM +N ++E+ + + IP +FNF PI ++ +L+D
Sbjct: 227 VLKAANKQFNTMKNDYEMTMNSDTEIVPCHDSSNDIPTLQFNFSPISQV-ESKEKNDLLD 285
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++GVV V I ++ + KRDI++ D++ VTV+LW A G A
Sbjct: 286 VLGVVTTVGDVQHITARTTGRELIKRDISIVDDSGTMVTVTLWGTQAEEFG------ASN 339
Query: 372 SPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+ I+AIK +VG+F G +LS + S + PD+PEA +L+ WY + G + S+
Sbjct: 340 NTIIAIKGARVGEFNGGKNLSLVMSSIIEKDPDIPEAHRLRGWYTAVGHSETAKSLSRVG 399
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRAC--K 486
GS NG + + ++ LG++ P F+ A I I+ + ++ YRAC +
Sbjct: 400 GSTDFNGPLYTFQE-------ATDARLGEKMNLPDSFTAVATIKQIRTENSL-YRACPVE 451
Query: 487 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
+C KK+ D + CE C K + R + + D +G WI+ FNEEAE+I+G SA
Sbjct: 452 SCKKKLIDQDNGIFRCEKCNKEYPNFTYRLLASMELADATGSRWITAFNEEAEKILGMSA 511
Query: 547 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
EL ELK D ++Y K E T+ + + + + +E R + + P+++
Sbjct: 512 QELGELKEN--DKDAYLQKFGEATFKTFMFNLKARSEVFQDEMRIKHVCTSAGPINYKTY 569
Query: 607 SKFLLEEISK 616
L++++SK
Sbjct: 570 LPHLIDKVSK 579
>gi|367023819|ref|XP_003661194.1| hypothetical protein MYCTH_2300304 [Myceliophthora thermophila ATCC
42464]
gi|347008462|gb|AEO55949.1| hypothetical protein MYCTH_2300304 [Myceliophthora thermophila ATCC
42464]
Length = 614
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 197/610 (32%), Positives = 309/610 (50%), Gaps = 45/610 (7%)
Query: 25 IPEIVVQVLDLKLTGN---------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGL 75
P V+Q L +K N RY SD + ++ +L + + V G +Q +
Sbjct: 25 FPVPVLQCLHIKFLENKNPGVPGPERYRIVLSDIRNYVQCMLATQANRVVHDGLLQKGSI 84
Query: 76 IRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD 134
+R+ Y + KS LI+ +V++ L KI D + P +Q+
Sbjct: 85 VRVKQYQAQSVKGKS--ILIILDLDVMT-HLGTPDKI---GDPKLMEAAPSEQQQNTTIG 138
Query: 135 GPGIVLKPKQE--MVAKSAAQILRD--QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIK 190
G G K E V ++ Q+ R + ++P+ +++PY WTIK
Sbjct: 139 GAGFYGGAKSEPAAVHETKPQVQRQVASRTGGGGGSGGHAASTIYPIEAISPYANKWTIK 198
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
VRVTSK ++RT+ EG +F+V L DE G +I+AT FN+ +FYD Q G VYYIS
Sbjct: 199 VRVTSKSDIRTWHKTHSEGKLFSVNLLDESG-EIRATAFNQEVDQFYDLLQEGSVYYIST 257
Query: 251 GT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL 309
+++A KQF + NDYE+ L + +E A ++++ +PQ +FNF I EL + V
Sbjct: 258 PCKVQLAKKQFSNLANDYELMLESGTVIERADDQSS-VPQVRFNFCTIQEL-QGVEKDAT 315
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
VD+IGV++ V+ I K+ + KR++T+ D+T +V V++W + A
Sbjct: 316 VDVIGVLKEVNELEQITSKTTQKPYDKRELTLVDDTGYSVRVTIWGKTAREF-------- 367
Query: 370 DKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
D SP ++A K +V DF G SLS L T+ + PD+PEA KLK WYE++G+ + A+
Sbjct: 368 DASPESVIACKGTRVSDFGGRSLSLLSSGTMAIDPDIPEAHKLKGWYEAQGRNNTFAT-H 426
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC-- 485
S L S+ GA + D N +LG +K +F++K I ++ + Y AC
Sbjct: 427 SNLSSV---GAATGRKDDAKWIAQIKNENLGVDKTDYFTVKGTIVHMRQEN-FAYPACPS 482
Query: 486 KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
++CNKKVTD +G G W CE C + RYIM + D +G WIS F+E+A I+G
Sbjct: 483 ESCNKKVTD-MGDGTWRCEKCNITHDRPQYRYIMSVCISDHTGNVWISCFDEQARLIMGK 541
Query: 545 SADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFA 604
+ADE+ EL+ Q D +++ R + + + R R++V AP+D+
Sbjct: 542 TADEMMELREQ--DQAAFEAAFDAANCRKMSFRCRAKMETFAEQPRVRISVWNAAPLDYK 599
Query: 605 AESKFLLEEI 614
+E+ L E I
Sbjct: 600 SEAHRLAELI 609
>gi|401837707|gb|EJT41601.1| RFA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 621
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 310/596 (52%), Gaps = 51/596 (8%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY-LIVTKCEVVSPA 105
SDG +KA+L + +S+ S +Q +IR++ A I + +KY L+V E+V
Sbjct: 51 SDGVYHMKALLRNQAASKFQSMELQRGDIIRVI-IAEPAIVRERKKYVLLVDDFELVQSR 109
Query: 106 LEM------------------EIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMV 147
EM +K E SD + + + G G +L +
Sbjct: 110 AEMVNQASTFLDNYFSERPNETLKDEDISDNGNVT----NQTNIGNLGVGDMLHSNSNLN 165
Query: 148 AKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
A + N +R + + L+PYQ WTIK RV+ KG ++T+ N RG
Sbjct: 166 ANEKKFVNEGSNSQK--------SRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRG 217
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
+G +FNV D G +I+AT FN+ A KF + Q GKVYY+S+ L+ A QF + + Y
Sbjct: 218 DGKLFNVNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPY 276
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIR 326
E+NL+ ++ VEE +E+ +P+T FNF+ +D + + VN VD++G++Q ++P +
Sbjct: 277 ELNLDRDTVVEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPQFELT 333
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ 386
++ + +RDIT+ D++ +++V LWN+ Q L N + + AIK ++V DF
Sbjct: 334 SRAGKKF-DRRDITIVDDSGFSISVGLWNQ------QALDFNLPEGSVAAIKGVRVTDFG 386
Query: 387 GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSD 444
G SLS ST++ +P++PEA LK WY+S+G+ + ++ G+G + +
Sbjct: 387 GKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRNANFTTLKQEPGVGGQSAASLTKFIAQ 446
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWC 502
R+++ + EK FFS KA IS +K D Y AC + CNKKV + + C
Sbjct: 447 RITIARAQAENLGRSEKGDFFSAKAAISFLKVDN-FAYPACSNENCNKKVLEQPDGTWRC 505
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E C N+ + RYI+ + D + + W+++F+++A++++G A+ L LK + D N +
Sbjct: 506 EKCDTNNASPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEF 563
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + + R+ + YN++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 564 TKITQSIQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYKAEADYLADELSKAL 619
>gi|254565291|ref|XP_002489756.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|238029552|emb|CAY67475.1| Subunit of heterotrimeric Replication Protein A (RPA) [Komagataella
pastoris GS115]
gi|328350171|emb|CCA36571.1| Replication protein A 70 kDa DNA-binding subunit [Komagataella
pastoris CBS 7435]
Length = 621
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 306/606 (50%), Gaps = 37/606 (6%)
Query: 28 IVVQVLDLKL----TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYAL 83
+ VQVL+LK TG R DG A++ + + I+ +++LL+Y
Sbjct: 24 LTVQVLNLKAIPNNTGKRLRLALCDGLYNANAVIRPESVEKAEAQGIKKGSIVQLLEYKA 83
Query: 84 NEI-PTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKD--GPGIVL 140
+ I P K LI+ +V+ E KI F E +D G +
Sbjct: 84 SMISPVK--HVLIIDNLQVLG---FQEEKINPSPTSVDQYFS-NHSGESNEDLLGTSMNS 137
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPA---------ARLAMTRRVHPLVSLNPYQGNWTIKV 191
QE K+ + D ++ + A +H + LNPYQ NWTIK
Sbjct: 138 PAPQEPAQKAQSHHQEDAKPKLSAQVTSKPQQTNSSTAKFPNIHAIDQLNPYQNNWTIKA 197
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RV+ K +MR + N RGEG +FNV L DE +I+AT FN+ A K+YD Q GKVYYIS+
Sbjct: 198 RVSYKSDMRKWSNQRGEGQLFNVNLLDE-TNEIRATAFNDVADKYYDLLQEGKVYYISKA 256
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
++ A QF + + YE+ L+ ++++ EA + + +P FNFV ++++ + ++ ++D
Sbjct: 257 RIQPAKPQFSNLTHTYELALDRDTQIIEA-EDASDVPSLHFNFVKLNKV-QDLDANAIID 314
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
+IGV++ V+P I KS +RDI V D T +TV LWN A L +
Sbjct: 315 VIGVIKVVNPAFQIVAKSTGRPFDRRDIEVVDNTGFAITVGLWNNTA------LEFDIPV 368
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE-GKGTSMASIGSGL 430
+VA K KV DF G SLS +T++ +PD PEA +LK+WY+ + G S+ + +
Sbjct: 369 GSVVAFKGAKVQDFGGRSLSLTQSATIITNPDSPEAYQLKAWYDQQGGSNQEFKSLKNEV 428
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--C 488
S + + R ++ S ++KP +FSIKAYIS I+ + Y AC + C
Sbjct: 429 SSNSGLNTKQDIQSRKTILQAQSEELGKNDKPDYFSIKAYISYIRTEN-FSYPACASEGC 487
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
N+KV + CE C N + + RYI+ V D +G+ W+++F+++A++++G SA E
Sbjct: 488 NRKVIQQSDDTWRCEKCDVNHPKPNHRYILTLSVVDHTGQLWVTLFDDQAQQLLGQSAGE 547
Query: 549 LNELK-SQLGDDN-SYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
L +LK + + ++N ++Q + RV + Y + R R ++A +DFA E
Sbjct: 548 LIDLKENDMSENNHAFQQVFNRIQMKEFSFRVKASPDSYKGQTRIRYNAVSLAKLDFALE 607
Query: 607 SKFLLE 612
+ L +
Sbjct: 608 ADALAD 613
>gi|322698294|gb|EFY90065.1| replication factor-A protein 1 [Metarhizium acridum CQMa 102]
Length = 595
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 306/612 (50%), Gaps = 67/612 (10%)
Query: 25 IPEIVVQVLDLK------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRL 78
P V+Q L +K G RY SDG ++A+L + + + G + R+
Sbjct: 26 FPVPVMQCLQVKPMGASATGGERYRLVMSDGDHYVQAMLATQANHVIHDGKLVRGSFARV 85
Query: 79 LDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKI----EVKSDE-------SGIIFKPKQ 127
Y N K + L++ EV+ +L ++ KI V+++E S + K+
Sbjct: 86 KQY--NPQNLKGKNILVILDLEVIE-SLGVQEKIGSPTAVETNEAKEQTIASNDFYGNKK 142
Query: 128 EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNW 187
E+ KP Q M ++ A GN ++P+ L+P+Q W
Sbjct: 143 EES----------KP-QSMPSRPAVH----DGGN------------IYPIEGLSPFQHKW 175
Query: 188 TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYY 247
TIK RVT K +++T+ GEG +F+V L DE G +I+AT FN+ FYD Q G VYY
Sbjct: 176 TIKARVTMKSDIKTWHKPTGEGKLFSVNLLDESG-EIKATGFNDQCDAFYDLLQEGSVYY 234
Query: 248 ISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
IS + +A KQF + NDYE+ ++ +E+A ++T +PQ +FNF I EL + V
Sbjct: 235 ISSPCRVNLAKKQFSNLPNDYEITFERDTRIEKAEDQTN-VPQVRFNFCTIQEL-QNVEK 292
Query: 307 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 366
VD+IGV+++V I KS+ + KR++T+ D+T +V V++W + A +
Sbjct: 293 DNTVDVIGVLKDVGEVSEITSKSSGKPFQKRELTLVDDTGYSVRVTVWGKTANSF----- 347
Query: 367 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI 426
+A+ +VA K KV DF G SLS L T+ V PD+P+A +LK WY+S G+ + A+
Sbjct: 348 -DANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYDSSGRTDNFAT- 405
Query: 427 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC- 485
+ S+ G R+ + ++ + +LG + P ++SIKA I +K D Y AC
Sbjct: 406 HQNMASMGNAGGRANETKTIAQV---KDENLGMDAPAYYSIKATIVFVKQD-TFCYPACS 461
Query: 486 -KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
+ CNKKV + G G++CE C + E RYI+ V D + W++ FNE E I G
Sbjct: 462 KEGCNKKVVET-GDGWYCEKCSVSHERPDYRYIVSLNVADHTSHQWLNCFNETGEAIFGM 520
Query: 545 SADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFA 604
+A++L ELK DD + + V R + + +R R V + + +DF
Sbjct: 521 TANQLMELKEN--DDAKFMAAFEAVNCKKLNFRCRAKMDNFGDTQRVRYQVISASFLDFK 578
Query: 605 AESKFLLEEISK 616
+E L E I +
Sbjct: 579 SEGNKLAELIKQ 590
>gi|344290276|ref|XP_003416864.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Loxodonta africana]
Length = 603
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 253/453 (55%), Gaps = 24/453 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 170 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 228
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 229 ADKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSV-MPCEDGHHLPTMQF 287
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIGV ++ I KSNN V KR+I + D + + V+ +
Sbjct: 288 DFTGIDDLENKSKDS-LVDIIGVCKSYEDATKIVVKSNNREVSKRNIYLMDMSGKVVSAT 346
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 347 LWGEDADKF------DGTRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 400
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD K +FS A
Sbjct: 401 WFDSEGQALDGVSISDLKSGGIGGSNTNWKTLYEVK------SENLGQGD-KADYFSCVA 453
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ A + D
Sbjct: 454 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILAANIADFLE 512
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G SA L ELK + ++ +++ + ++ R+ + + YN+
Sbjct: 513 NQWVTCFQESAEAILGQSAAYLGELKEK--NEQAFEEVFQNASFRSFTFRIRIKLETYND 570
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
E R + +V V PVD+ + L+ I K +
Sbjct: 571 ESRIKASVVDVKPVDYREYGRRLIVSIRKNATQ 603
>gi|340714568|ref|XP_003395799.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Bombus terrestris]
Length = 595
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/591 (29%), Positives = 309/591 (52%), Gaps = 54/591 (9%)
Query: 38 TGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEI--PTKSEKYL 94
+G RY SDGK+ +L + L+S + + + ++ YA++ + K ++ +
Sbjct: 36 SGERYRLLVSDGKRINSFTMLATQLNSMITDNVLTEFSICQINRYAISVVNNAGKQKRVM 95
Query: 95 IVTKCEVVSPALEMEIKIEVKSDESGI-IFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ 153
++ + + ++V DE G I P D DG KP Q + +
Sbjct: 96 VI-----------LSVDLKVAGDEVGHKIGNPTNAD---ADGES---KPAQSVQSAQTTS 138
Query: 154 -----ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGE 208
++ +G + + ++ P+V+L+PYQ W IK RV +K +RT+ N+RGE
Sbjct: 139 QQQSSLVSKHSGQQSSTSDISTI----PIVALSPYQNRWVIKARVVNKSAIRTWSNSRGE 194
Query: 209 GCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYE 268
G +F+++L DE G +I+ T F + KFYD ++GKVYYISR TL+ ANKQF ++NDYE
Sbjct: 195 GKLFSMDLVDESG-EIRCTAFRDQCDKFYDMIEIGKVYYISRATLKTANKQFNNLKNDYE 253
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
M+L +SE+ + IP +F+F+PI+++ + +++DI+ +V++ + +
Sbjct: 254 MSLTGDSEIIPCHDIGDKIPTLQFDFIPINDIEQK-EKNDIIDILAIVKSRGDLQMLVSR 312
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-G 387
+ + + KRDI + DE+ VT++LW A + + +P++AIK +VG+F G
Sbjct: 313 TTGKDMKKRDINLIDESNTMVTLTLWGTQAEEF------SGNDNPVLAIKGARVGEFNGG 366
Query: 388 ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVS 447
+LSTL + V + PD+PEA +L+ W+ + G + GS A+ +
Sbjct: 367 KNLSTLSGTAVQIDPDIPEAHRLRGWFNTTGCHEEAKPLSRAFGSAAQMSQ--------A 418
Query: 448 LTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCE 503
L I S D+K P F++KA I+L++ + + Y++C + C KKV D Y CE
Sbjct: 419 LITIGEANSQIDKKIGPEIFTVKATINLLRTENIL-YKSCPSENCKKKVIDQANGMYRCE 477
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
C K R + + D + W++ FN+E E+I+G +A EL ELK D+++Y
Sbjct: 478 KCNKEFPNFKYRLLGSLSLADWTDNMWVTAFNDETEKILGITAQELGELKEN--DNDAYL 535
Query: 564 MKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
KL +VT+ + ++ + + +E R R T V+P D A ++ L+ ++
Sbjct: 536 EKLGDVTFKSFIFKIRTKMETFGDENRLRSTCIDVSPTDCKAYNEDLITKL 586
>gi|440795064|gb|ELR16205.1| replication factora protein 1 (rpa1) subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 553
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 258/465 (55%), Gaps = 40/465 (8%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNPYQ WTIK R+T K +MR + NARG+ +F+V+L D G +I+ T F EAA +
Sbjct: 107 PIKGLNPYQNRWTIKARITHKSDMRPFNNARGQSFLFSVDLLDAFGGEIRCTFFGEAATQ 166
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+ D+ + G+V+ I RG+++ ANK+F T++NDYE++L++N+ ++ ++ + IP KFNFV
Sbjct: 167 WNDQIEAGQVFLIGRGSVKYANKRFSTLKNDYEISLDKNALIQPTEDDPS-IPFYKFNFV 225
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I +LG + E +DI+G V IR ++ NE+ KR + V D + V V+LW
Sbjct: 226 DIADLGGHAK-DETIDILGAVLESGAIQDIRTQAGNEL-QKRVVKVGDSSNAQVEVTLWG 283
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
E A + D+ +V K +K+ D+ SL+ L S + P +PEA +++ W+E
Sbjct: 284 EQAAQW------SGDRGLVVLFKGVKISDYNQRSLTVLRTSKLEFEPRIPEADRVREWFE 337
Query: 416 SEGKGTSMASIGSGLGSLAKN----------------GARSMYSDRVSLTHITSNPSLGD 459
+ G+G + S+++N R R S + + G
Sbjct: 338 TAGQGE--------VASMSRNDFKGRGGGGEGGFGGGDKRPWDETRKSFAAV-KQVAFGG 388
Query: 460 EKPVFFSIKAYISLIKP--DQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLR 515
++ V+FS++A ++ IK D WY AC T CNKKVT ++G Y C C + R
Sbjct: 389 QESVYFSVRATVTEIKHSRDHPPWYEACPTEKCNKKVT-SVGGAYHCTKCGATHDHYKPR 447
Query: 516 YIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPH 574
Y++ D SG +W++ FN+ A ++ G +AD+L E+ S+ ++ Y+ ++ + +
Sbjct: 448 YVLSLNANDHSGSSWLTCFNDTASDVLNGTTADDLLEMLSRPQGESQYEDVFQKALFKSY 507
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
LRV Q EY E + +++V V P+D+A ESKFL+ I+K ++
Sbjct: 508 NLRVRATQSEYEGENKVKLSVVKVIPMDYAKESKFLINSIAKYIT 552
>gi|213512619|ref|NP_001135257.1| Replication protein A 70 kDa DNA-binding subunit [Salmo salar]
gi|209155456|gb|ACI33960.1| Replication protein A 70 kDa DNA-binding subunit [Salmo salar]
Length = 607
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 313/613 (51%), Gaps = 35/613 (5%)
Query: 22 SSDIPEIVVQVLDL-KLTGN----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLI 76
S+D+ ++Q++++ K+ G R+ SDG+ + + + S + + N I
Sbjct: 17 SNDVQNPILQLVNIRKIDGGSGPARFRLMMSDGQHSMSSFMLSTQLNPMAEDNRLAPNCI 76
Query: 77 RLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGP 136
L + + + +++ EVV A E+ KI E + + + P
Sbjct: 77 CQLKRNVTNVLKDGRRVVVILDMEVVKSADEVAGKI----GEPQPYVEGQSKAPQSAPNP 132
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGN---MAPAARLAM---TRRVHPLVSLNPYQGNWTIK 190
+ P Q + S + + G M P+A + + +V P+ SLNPYQ WTI+
Sbjct: 133 SVHPLPPQNGIDGSMNKGPSREFGGKKGMPPSAMPSTPGGSAKVVPIASLNPYQSKWTIR 192
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
RVT+K +RT+ N+RG+G +F++E+ DE G +I+ T F + KFY + GKV+YIS+
Sbjct: 193 ARVTNKSGIRTWSNSRGDGKLFSMEIVDESG-EIRVTAFTQEVDKFYSIIETGKVFYISK 251
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
G+L++ANKQ+ +++NDYEM LN S + +T +P + NFV I +L T ++
Sbjct: 252 GSLKIANKQYSSLKNDYEMTLNGESTI-IPCEDTQDVPMVQCNFVSIADLQAREKDT-IL 309
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IGV ++VS + K+N E V KR + + D++ + V V+LW E A N +
Sbjct: 310 DVIGVCKSVSDVTRLNTKNNRE-VSKRTLNLMDQSGKLVEVTLWGEEAENF------DGS 362
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
PI+AIK K+ D+ G SLS STV+V+PD+PEA KL+ WY+ EG S+
Sbjct: 363 GQPILAIKGAKLSDYGGRSLSASFSSTVMVNPDIPEAYKLRGWYDKEGHSMDGQSL---- 418
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--C 488
+ A+ G ++ +L I + +K +FS A I I+ + + Y+AC + C
Sbjct: 419 -TEARTGGGGGNTNWKTLADIKTEHLGHGDKADYFSCIATIVYIRKENCL-YQACPSQDC 476
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
NKKV D + CE C K R I+ A + D W++ F E AE I+G +A
Sbjct: 477 NKKVVDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAY 536
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
L +LK ++ +++ ++ + + R V + YN+E R + TV V PVD SK
Sbjct: 537 LGQLKDS--NEAAFEEIFQQANFHTFVFRNRVKLETYNDESRIKATVMEVKPVDHKEYSK 594
Query: 609 FLLEEISKKVSHQ 621
L+ I K S Q
Sbjct: 595 RLIMNIRKMASAQ 607
>gi|323306166|gb|EGA59898.1| Rfa1p [Saccharomyces cerevisiae FostersB]
Length = 455
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 261/453 (57%), Gaps = 19/453 (4%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
TR + + L+PYQ WTIK RV+ KG ++T+ N RG+G +FNV D G +I+AT FN
Sbjct: 15 TRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDTSG-EIRATAFN 73
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+ ++ +EE +E+ +P+T
Sbjct: 74 DFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN-VPKT 132
Query: 291 KFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
FNF+ +D + + VN VD++G++Q ++P + ++ + +RDIT+ D++ ++
Sbjct: 133 HFNFIKLDAIQNQEVNSN--VDVLGIIQTINPHFELTSRAGKKF-DRRDITIVDDSGFSI 189
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
+V LWN+ A + N + + AIK ++V DF G SLS ST++ +P++PEA
Sbjct: 190 SVGLWNQQALDF------NLPEGSVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYA 243
Query: 410 LKSWYESEGKGTSMASIGS--GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
LK WY+S+G+ + ++ G+G + + R+++ + EK FFS+
Sbjct: 244 LKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITIARAQAENLGRSEKGDFFSV 303
Query: 468 KAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
KA IS +K D Y AC + CNKKV + + CE C N+ + RYI+ + D
Sbjct: 304 KAAISFLKVDNFA-YPACSNENCNKKVLEQPDGTWRCEKCDTNNARPNWRYILTISIIDE 362
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+ + W+++F+++A++++G A+ L LK + D N + + + + R+ + Y
Sbjct: 363 TNQLWLTLFDDQAKQLLGVDANTLMSLKEE--DPNEFTKITQSIQMNEYDFRIRAREDTY 420
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
N++ R R TV + +++ AE+ +L +E+SK +
Sbjct: 421 NDQSRIRYTVANLHSLNYRAEADYLADELSKAL 453
>gi|322710190|gb|EFZ01765.1| replication factor-A protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 595
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 305/612 (49%), Gaps = 67/612 (10%)
Query: 25 IPEIVVQVLDLK------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRL 78
P V+Q L +K G RY SDG ++A+L + + + G + R+
Sbjct: 26 FPVPVMQCLQVKPMGASATGGERYRLVMSDGDHYVQAMLATQANHVIHEGKLVRGSFARV 85
Query: 79 LDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKI----EVKSDE-------SGIIFKPKQ 127
Y N K + L++ EV+ +L ++ KI V+++E S + K+
Sbjct: 86 KQY--NPQNLKGKNILVILDLEVIE-SLGVQEKIGSPTAVETNEAKEQTIASNDFYGTKK 142
Query: 128 EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNW 187
E+ KP Q M ++ A GN ++P+ L+P+Q W
Sbjct: 143 EES----------KP-QAMPSRPAVH----DGGN------------IYPIEGLSPFQHKW 175
Query: 188 TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYY 247
TIK RVT K +++T+ GEG +F+V L DE G +I+AT FN+ FYD Q G VYY
Sbjct: 176 TIKARVTMKSDIKTWHKPTGEGKLFSVNLLDESG-EIKATGFNDQCDAFYDLLQEGSVYY 234
Query: 248 ISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
IS + +A KQF + NDYE+ ++ +E+A ++T +PQ +FNF I EL + V
Sbjct: 235 ISSPCRVNLAKKQFSNLPNDYEITFERDTRIEKAEDQTN-VPQVRFNFCTIQEL-QNVEK 292
Query: 307 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 366
VD+IGV+++V I K++ + KR++T+ D+T +V V++W + A +
Sbjct: 293 DNTVDVIGVLKDVGEVSEITSKASGKPFQKRELTLVDDTGYSVRVTVWGKTANSF----- 347
Query: 367 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI 426
+A+ +VA K KV DF G SLS L T+ V PD+P+A +LK WY+S G+ + A+
Sbjct: 348 -DANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYDSSGRTDNFAT- 405
Query: 427 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC- 485
+ S+ G R+ + ++ +LG + P ++SIKA I +K + Y AC
Sbjct: 406 HQNMASMGNAGGRANENKTIAQV---KEENLGMDAPAYYSIKATIVFVKQEN-FCYPACS 461
Query: 486 -KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
+ CNKKV + G G++CE C + E RYI+ V D + W++ FNE E I G
Sbjct: 462 KEGCNKKVVET-GDGWYCEKCSVSHERPDYRYIVSLNVADHTSHQWLNCFNETGEAIFGM 520
Query: 545 SADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFA 604
SA++L ELK DD + + V R + + +R R + + A +DF
Sbjct: 521 SANQLMELKDN--DDAKFMAAFEAVNCKKLNFRCRAKMDNFGDTQRVRYQIMSAAFLDFK 578
Query: 605 AESKFLLEEISK 616
+E L E I +
Sbjct: 579 SEGNKLAELIKQ 590
>gi|302690362|ref|XP_003034860.1| hypothetical protein SCHCODRAFT_50382 [Schizophyllum commune H4-8]
gi|300108556|gb|EFI99957.1| hypothetical protein SCHCODRAFT_50382 [Schizophyllum commune H4-8]
Length = 628
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 312/586 (53%), Gaps = 48/586 (8%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG+ ++A+L + L+ I N ++R+ + N + ++ + +IV E+V
Sbjct: 65 SDGEWFMQAMLATQLNDVGIEKN----SIVRISRASRNIV--QNRRLVIVLGLEIVQHCD 118
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDG-----PGIVLKP----KQEMVAKSA-----A 152
E +++ + +DE P + +VK DG P KP V ++A A
Sbjct: 119 E-KLRRD-PNDEKQPYTLPSEYLKVKPDGENGQSPAPQSKPAAAPSTSTVPRTATPQLPA 176
Query: 153 QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
Q RD N AP R ++P+ L+PYQ NWTIK RVT K ++R + N RGEG +F
Sbjct: 177 QPHRDSK-NTAPNGR-----SIYPIEGLSPYQNNWTIKARVTQKSDIRRWSNQRGEGRLF 230
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
NV L D+ G +I+AT FN+A + YD+F+ GKVYY+S+ + +A K+F V NDYE++L
Sbjct: 231 NVTLMDDTG-EIRATGFNQAVDELYDKFEEGKVYYVSKARVNLAKKKFSNVNNDYELSLE 289
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++EVE + E A +P K+NFV +D L + V D+IGVV+ V I K+ N
Sbjct: 290 RSTEVEPCL-EAADVPTIKYNFVKLDAL-QEVPKDSNCDVIGVVKEVGELSEITTKTTNR 347
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
+ KR++T+ D+T +V V+LW A +E P++A K +KVGDF G SLS
Sbjct: 348 TMKKRELTLVDDTGYSVRVTLWGNTAEKYEEE------GHPVIAFKGVKVGDFGGRSLSM 401
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI- 451
L S + V+PD EA L+ W++ +GK +S SG G+ G D+ +L I
Sbjct: 402 LMSSMMFVNPDTTEAFHLRGWFDDDGKTLQFSSHTSGGGAGTGRGFDR--DDQRTLMEIK 459
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKN 508
+N +GD+ P +FS +A I IK D Y AC++ CNKKV + G G W CE C +
Sbjct: 460 NANLGMGDQ-PDYFSSRATIMHIK-DNNFAYPACRSPDCNKKVVEN-GPGEWRCEKCNVS 516
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
R+++ V D G+AW FN+ + I SA+E+ ++KS GDD+ + +
Sbjct: 517 HSSPDYRFMLQLAVADLHGQAWFQGFNDAGQVIFNRSANEIMQMKS--GDDDGFLRAFAQ 574
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ +N+E R R + V PVDF E++++ +++
Sbjct: 575 ANYQAFNFNCRAKADTWNDETRVRYGITKVEPVDFVKEAQYMRDKL 620
>gi|310793692|gb|EFQ29153.1| replication factor-a protein 1 [Glomerella graminicola M1.001]
Length = 608
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 193/639 (30%), Positives = 316/639 (49%), Gaps = 61/639 (9%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG-------NRYMFNASDGKKRL 53
++ ++ A+ + ++P +++ P V+Q L +K RY SD +
Sbjct: 3 VESKITKGALDAVFNDPE-GANTKFPVPVLQCLQIKPLAAQAGGGAERYRIVLSDVNNYV 61
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV----------- 102
+ +L + ++ V + ++R+ Y N + K + LI+ EV+
Sbjct: 62 QCMLATQVNHVVHENKLVRNCIVRITQYQANSV--KGKNILIILGLEVIEQLGTPDKIGE 119
Query: 103 -SPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGN 161
P + G F +++E K KP+Q + ++SA Q+G
Sbjct: 120 PQPFEAKPPPAAANTTIGGQNFYGVKQEETKP-------KPQQSIPSRSAGGAT-GQHG- 170
Query: 162 MAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDG 221
+ ++P+ +L+PY WTIK RVT K ++RT+ GEG +F+V L DE G
Sbjct: 171 ---------SSNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLDESG 221
Query: 222 TQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEA 280
+I+AT FNE ++YD Q G VYYIS +++A KQF + NDYE+ ++ +E+A
Sbjct: 222 -EIKATGFNEQVDQYYDMLQEGGVYYISSPCKVQLAKKQFTNLPNDYELTFERDTVIEKA 280
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
++++ +PQ +FNF I EL + V VDIIGV+++V I KS + KR++T
Sbjct: 281 EDQSS-VPQVRFNFCNIQEL-QEVEKDATVDIIGVLKDVDEVSQIVSKSTGKPYEKRELT 338
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
+ D+T +V V++W + ATN +A +VA K KV DF G SLS L T+ +
Sbjct: 339 LVDDTNYSVRVTIWGKSATNF------DAKPESVVAFKGTKVSDFGGRSLSLLSSGTMSI 392
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
PD+P+A +LK WY+S G+ + +S ++A G + D+ +LG E
Sbjct: 393 DPDIPDAHRLKGWYDSSGRNDTFSS----HNNMASMGNATGRKDQDKSILQVKEENLGME 448
Query: 461 KPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYI 517
+ +F++KA I IK D Y AC + C+KKVTD +G G W CE C + + RYI
Sbjct: 449 QQDYFNLKATIVYIKQDN-FAYPACMNEGCSKKVTD-MGDGTWRCEKCDVSHPKPEYRYI 506
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
M VCD + + W+S F++ ++G SAD+L L+ + D+ +E R
Sbjct: 507 MSVNVCDHTNQLWLSCFDDVGRVVMGMSADQLMALREE--DETKMAQAFEEANCRKLNFR 564
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ +R R V + +P+D+ AE L E I +
Sbjct: 565 CRAKMDTFGESQRIRYQVMSASPIDYKAEGAKLAELIKQ 603
>gi|380486564|emb|CCF38620.1| replication factor-a protein 1 [Colletotrichum higginsianum]
Length = 607
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 198/644 (30%), Positives = 322/644 (50%), Gaps = 72/644 (11%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLK----LTGN---RYMFNASDGKKRL 53
++ ++ A+ I ++P ++ P V+Q L +K TG RY SD +
Sbjct: 3 VESKITKGALDAIFNDPE-GANVKFPVPVLQCLQIKPLAAQTGGGAERYRIVLSDVNNYV 61
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV----SP----- 104
+ +L + ++ + + ++R+ Y N + K + LI+ EV+ +P
Sbjct: 62 QCMLATQVNHVIHENKLVRNCIVRITQYQANSV--KGKNILIILGLEVIEQLGTPDKIGE 119
Query: 105 --ALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNM 162
A E + + G F +++E K KP+Q + ++SA Q+G
Sbjct: 120 PQAFEAKPPAPANTTIGGQNFYGVKQEETKP-------KPQQSIPSRSAGGAT-GQHG-- 169
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
+ ++P+ +L+PY WTIK RVT K ++RT+ GEG +F+V L DE G
Sbjct: 170 --------SSNIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLDESG- 220
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAV 281
+I+AT FNE ++YD Q G VYYIS +++A KQF + NDYE+ ++++E+A
Sbjct: 221 EIKATGFNEQVDQYYDLLQEGGVYYISSPCKVQLAKKQFTNLPNDYELTFERDTQIEKAE 280
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+++ +PQ +FNF I EL + V VDIIGV+++V I KS + KR++T+
Sbjct: 281 DQSN-VPQVRFNFCNIQEL-QEVEKDATVDIIGVLKDVDEVSQIVSKSTGKPYEKRELTL 338
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS 401
D+T +V V++W + ATN +A +VA K KV DF G SLS L T+ +
Sbjct: 339 VDDTNYSVRVTIWGKSATNF------DAKPESVVAFKGTKVSDFGGRSLSLLSSGTMSID 392
Query: 402 PDLPEAKKLKSWYESEGKGTS------MASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
PD+P+A +LK WY+S G+ + M S+G+ G K+ +S+
Sbjct: 393 PDIPDAHRLKGWYDSSGRNDTFSNHNNMVSMGNATGR--KDQDKSILQ--------VKEE 442
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEEC 512
+LG E+ +F++KA I IK D Y AC + CNKKVT+ G G W CE C + +
Sbjct: 443 NLGMEQQDYFNLKATIVYIKQDN-FAYPACMNEGCNKKVTET-GEGAWRCEKCDVSHPKP 500
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWV 572
RYIM VCD + + W+S F++ I+G SAD+L L+ + D+ ++
Sbjct: 501 EYRYIMSVNVCDHTNQLWLSCFDDVGRVIMGMSADQLTNLREE--DETKMAQAFEDANCR 558
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + +R R V + +P+D+ AE L + I +
Sbjct: 559 KLNFRCRAKMDTFGESQRVRYQVMSASPIDYKAEGAKLADLIKQ 602
>gi|169852738|ref|XP_001833051.1| replication factor-A protein 1 [Coprinopsis cinerea okayama7#130]
gi|116505845|gb|EAU88740.1| replication factor-A protein 1 [Coprinopsis cinerea okayama7#130]
Length = 604
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 200/615 (32%), Positives = 306/615 (49%), Gaps = 56/615 (9%)
Query: 14 LSNPSPDSSSDIPEIVVQVLDLKLTG----------NRYMFNASDGKKRLKAILPSNLSS 63
+NP S + P +Q L +K +RY SDG ++A+L + L+
Sbjct: 18 FANPQDASVFESPH-TIQFLSIKKVNTANPNSNAPVDRYRIIISDGVHFIQAMLATQLN- 75
Query: 64 EVISGNIQNKGLIRLLDYA-LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
E++ N K + +++ A N + EK LIV LE+ + + I
Sbjct: 76 ELVQNNSIGKHTVAVVERATCNYV---QEKRLIVV--------LELRVVAHLPDK----I 120
Query: 123 FKPKQ-EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPA--ARLAMTRRVHPLVS 179
P+Q + K+ + P + VA S + APA A R V+P+
Sbjct: 121 GDPQQLGPDSKRALDSASVTPAPQSVATSGPST----STKTAPAKPATTGPQRGVYPIEG 176
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L+PYQ NWTIK RVT K M+ + NA+GEG +FNV D+ G +I+AT FN A Y +
Sbjct: 177 LSPYQNNWTIKARVTQKSEMKQWSNAQGEGKLFNVTFMDDSG-EIRATAFNLVADDLYPK 235
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+ GKVYY+S+ + +A K+F + NDYE++L N+E+EE +ET +P K+NFVP++
Sbjct: 236 LEEGKVYYVSKARVGLAKKKFSNIPNDYELSLERNTEIEEC-HETTNLPTIKYNFVPLNG 294
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
L + D+IGVV++V +I +SNN + KRD+T+ D++ +V ++LW + A
Sbjct: 295 LDALAKDA-ICDVIGVVKDVGEVGTITSRSNNRQISKRDLTLVDKSAYSVRMTLWGKQAE 353
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
E I+A K ++VGDF G +LS ST+ V+PD+ E L+ WY+S+G+
Sbjct: 354 QFKVE------PESIIAFKGVRVGDFNGRNLSMTSASTMQVNPDIEECFTLRGWYDSQGQ 407
Query: 420 G-TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPD 477
T A + LG + R D G +KP +FS +A I IK D
Sbjct: 408 TQTFQAQSSNNLGGTSLGFRR----DEARTLEDVKQAGFGQSDKPDYFSTRATIIHIKDD 463
Query: 478 QAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
+ Y AC T CNKKV + G+ CE C+K E RYIM V D +G+AW FN
Sbjct: 464 N-IAYPACPTQGCNKKVIEE-ADGWRCEKCEKVFEAPEYRYIMSMMVADHTGKAWFQGFN 521
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E + G SA++L ++K+ D Y+ + + E+N +R R +
Sbjct: 522 EVGVTVYGMSANDLVQIKNN--DHAQYKAIQYHAACNTYNFSCRAKEDEFNGVRRVRFGI 579
Query: 596 RAVAPVDFAAESKFL 610
+A VD+ E+ +L
Sbjct: 580 SRLAKVDYKEEAGYL 594
>gi|242086615|ref|XP_002439140.1| hypothetical protein SORBIDRAFT_09g001260 [Sorghum bicolor]
gi|190688743|gb|ACE86406.1| replication protein A1-like protein [Sorghum bicolor]
gi|241944425|gb|EES17570.1| hypothetical protein SORBIDRAFT_09g001260 [Sorghum bicolor]
Length = 933
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 252/452 (55%), Gaps = 22/452 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R+ P+ LNPYQ WTIK RVT+K ++R Y N G G VF+ ++ D G +I+ T FN
Sbjct: 310 RLVPVAHLNPYQNTWTIKARVTAKTDLRHYNNKNGAGKVFSFDILDGQGGEIRVTCFNAQ 369
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A +F+D ++ KVY IS+G+++ A K+F ++ ++YE+ L+ S +E V++ + IP+ +
Sbjct: 370 ADQFFDLIEVDKVYLISKGSVKAAQKKFNSLNHEYEIALDFRSSIEVCVDDDSNIPRPHY 429
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I E+ GT +VD+IG+V +V P+ +I RK +N V KR++ + D + R++ ++
Sbjct: 430 NFRQISEIENLEAGT-IVDLIGIVTSVGPSGTIIRKLDNSEVQKRNLQLKDMSGRSIELT 488
Query: 353 LWNELATNVGQELLDNADK--SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
LW + GQ+L D +P++A+K +V +F G S++T G + V V PD PEA+ L
Sbjct: 489 LWGKFCDAEGQQLQLQCDSGLNPVLALKGARVTEFSGKSVNTTGSTHVKVDPDFPEAESL 548
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
+ WY +EGK + S+ S+ G + R ++ I EKP F ++K
Sbjct: 549 RRWYATEGKTAACVSL-----SVVSMGRTDV---RKAVAQIKDEDLGRSEKPDFITVKGA 600
Query: 471 ISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVC 523
IS + D Y AC K CNKKV + G G W C+ C K+ C RY++ +V
Sbjct: 601 ISHLTTDN-FCYPACTLEVNGKVCNKKVINN-GDGTWQCDKCDKSLPNCEYRYLLQCQVQ 658
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G + + F E I+G SA EL ++ + D + L+ V W L ++ V ++
Sbjct: 659 DHTGVTYATAFQEAGIEIVGHSAYELYNIREE--DPERFAEILQGVRWQQFLFKLKVYEE 716
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
YN+E R + + +D A ES +LL I+
Sbjct: 717 TYNDEHRVKCNILRAEKLDPAKESSYLLGVIN 748
>gi|340522901|gb|EGR53134.1| replication factor A-like protein [Trichoderma reesei QM6a]
Length = 600
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 309/624 (49%), Gaps = 39/624 (6%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKA 55
+ +S I+ I ++P ++ P V+Q L +K G+RY SDG ++
Sbjct: 4 ESALSRGCIAAIFNDPD-QAAKQFPVPVMQCLQIKQMAPSGQGGDRYRLVMSDGVNYVQT 62
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + + + ++ L R+ Y N + K + L++ EV+ +L + KI
Sbjct: 63 MLATQANHVIHDNKLERGCLTRVKQYTPNNL--KGKNILVILDLEVIE-SLGVHEKIG-- 117
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
++ +P+ E G K+E K Q L+ +M + ++
Sbjct: 118 ---DPVVLEPRAA-ETTIAGNDFYGAKKEEQDVKPQMQQLQ----SMPSRSATHSGANIY 169
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +L+P+ WTIK RVT K +++T+ GEG +F+V L DE G +I+AT FN+
Sbjct: 170 PIEALSPFSSKWTIKARVTFKSDIKTWHKPTGEGKLFSVNLLDESG-EIKATGFNDQCDA 228
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
FYD Q G VYYIS + +A KQF + NDYE+ + +E+A ++T +PQ +FNF
Sbjct: 229 FYDILQEGSVYYISSPCRVSLAKKQFSNLPNDYELAFERETVIEKAEDQTN-VPQVRFNF 287
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I EL + V VD+IGV++ V I K + KR++T+ D+T +V V++W
Sbjct: 288 CTIQEL-QSVEKDSTVDVIGVLKEVGEVSEITSKKDGRPFQKRELTLVDDTGYSVRVTIW 346
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ A++ +A+ +VA K KV DF G SLS L T+ V PD+P+A +LK WY
Sbjct: 347 GKTASSF------DANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAYRLKGWY 400
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
+S G+ + A+ + G G + + + + +LG + +++IKA I +
Sbjct: 401 DSVGRTDTFATHQNLAGVAGATGRK----EEIKTIAQVKDENLGVDDQAYYTIKATIVFV 456
Query: 475 KPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
K D + Y AC + CNKKVT + CE C + ++ RYIM V D + W+S
Sbjct: 457 KQD-SFCYPACSNQGCNKKVTPMPDGTWQCEKCSVSHDKPDYRYIMQLNVADHTSHQWLS 515
Query: 533 IFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQR 592
F++ I+G SA+EL ELK DD + + V + R + + +R R
Sbjct: 516 CFDDTGRIIVGMSANELMELKEN--DDAKFMAAFEAVNCKKLMFRCRAKMDNFGDTQRVR 573
Query: 593 VTVRAVAPVDFAAESKFLLEEISK 616
V + + +D+ +E L+E I +
Sbjct: 574 YQVMSASLIDYKSEGHKLVELIKQ 597
>gi|332018503|gb|EGI59093.1| Replication protein A 70 kDa DNA-binding subunit [Acromyrmex
echinatior]
Length = 608
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 314/613 (51%), Gaps = 47/613 (7%)
Query: 24 DIPEIVVQVLDLK----------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNK 73
DI V+QVL K +R+ SDG+K + + + +I+ NI N
Sbjct: 17 DIDNPVLQVLGYKKLPRNVNKDGSATDRFRLLISDGQKLNSFTMLATQLNNLITENILND 76
Query: 74 -GLIRLLDYALNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDE 130
+ ++ +Y ++ + K ++ +++ EV+ P ++ KI + + I K + E
Sbjct: 77 FAICKITNYHMSSVNNSGKEKRVMLILGIEVLVPGDQVGNKI---GNPTNIEMKSEPEST 133
Query: 131 VKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIK 190
SA R+ N P++ + T P+ +L+PYQ W IK
Sbjct: 134 STSTSTCTSKATTSHYQNGSA----RNATSNYQPSSDIYTT----PIAALSPYQNKWVIK 185
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
VRVT+K ++T+ N+RGEG +F+++L DE G +I+ T F + KFYD + G VYYISR
Sbjct: 186 VRVTNKSPIKTWSNSRGEGKLFSMDLIDESG-EIRCTAFRDQCEKFYDMIETGNVYYISR 244
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
TL+ ANKQF T++NDYEM + ++E+ + IP +F+F PI ++ +L+
Sbjct: 245 CTLKAANKQFCTLKNDYEMTMTGDTEIIPCHENSDDIPTLQFDFCPISQI-ESKEKNDLL 303
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D++GVV + I +++ + KRDI + D++ V V+LW + A + +
Sbjct: 304 DVLGVVTTFNDVQQIIQRTTGRELLKRDINIVDDSGTMVCVTLWGKQAEDF------DGS 357
Query: 371 KSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+PI+AIK +VG+F G +LS L S PDLPEA +L+ WY + G ++
Sbjct: 358 NNPIIAIKGARVGEFNGGKNLSLLHSSVFEKDPDLPEAHRLRGWYTAVGHSENIK----- 412
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF--FSIKAYISLIKPDQAMWYRAC-- 485
SL+K G ++ + + LG++ + F++ A I++I+ + A+ Y+AC
Sbjct: 413 --SLSKTGGGGDFNAPLYTFEEATEARLGEKMNLADSFTVVATINMIRVENAI-YKACPV 469
Query: 486 KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS 545
++C KK+ D + CE C K+ R + + D +G WI+ F+E+AE+I+G S
Sbjct: 470 ESCKKKLIDQSTGVFRCEKCNKDYPNSIYRLLASMNIVDATGSRWITAFSEDAEKILGMS 529
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
A EL ELK D++++ K E ++ + + + + +E R + +VAPV++
Sbjct: 530 AQELGELKEN--DNDAFLQKFGEASFKKFIFTLRAKSEVFQDEMRIKHVCSSVAPVNYKT 587
Query: 606 ESKFLLEEISKKV 618
L++ +SK V
Sbjct: 588 YLTHLIDRVSKLV 600
>gi|410915298|ref|XP_003971124.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Takifugu rubripes]
Length = 570
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 246/442 (55%), Gaps = 22/442 (4%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNPYQ WTI+ RV +K ++RT+ N+RGEG +F+ E+ DE G +++ T FN+ K
Sbjct: 143 PIAQLNPYQSKWTIRARVMNKSSIRTWNNSRGEGKLFSFEIVDESG-EMKITAFNKEVDK 201
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F+ + GKVYYIS+ TL+VANKQ+ T+++DYEM L+ +S + + IP + +FV
Sbjct: 202 FFSLVEQGKVYYISKATLKVANKQYNTLKHDYEMTLHAHSSIMPCADGQD-IPAVQCDFV 260
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PI EL + ++D+IGV + I KS+ E V KR + + D T + V +LW
Sbjct: 261 PIAELENR-DKDAIIDVIGVCKTAEDVSRITTKSSRE-VSKRTLHLIDTTGKMVAATLWG 318
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
E A + P+VAIK ++ DF G SLS L STV+V+PD+PEA +L++WY+
Sbjct: 319 EEAEKF------EGSEQPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYD 372
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLI 474
G + S+ S K+G M + +L+ + N +LG EK +FS A +
Sbjct: 373 QGGYALASQSL-----SETKSGGSGMRMNWKTLSDV-KNENLGHGEKADYFSCVATLLYS 426
Query: 475 KPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
+ D + YRAC + CNKKV D + CE C + R ++ A + D W++
Sbjct: 427 RKDTCL-YRACPSVDCNKKVLDQHNGWFRCEKCNREFPNFKYRLLLSANLADFGDNQWVT 485
Query: 533 IFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQR 592
F E AE ++G SA+ L +L+ D+ ++ ++ + H+ + V + YN+E R +
Sbjct: 486 CFQETAEALLGHSAETLGQLRDT--DEAAFDAVFQKANFTTHIFKNRVKLETYNDESRVK 543
Query: 593 VTVRAVAPVDFAAESKFLLEEI 614
VTV V PV+ S+ LL I
Sbjct: 544 VTVMEVQPVNHREYSRMLLSNI 565
>gi|358389545|gb|EHK27137.1| hypothetical protein TRIVIDRAFT_85768 [Trichoderma virens Gv29-8]
Length = 600
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 306/625 (48%), Gaps = 42/625 (6%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKA 55
+ +S I I ++P +++ P V+Q L +K G+RY SDG ++
Sbjct: 4 ESALSRGCIEAIFNDPD-QAANRFPVPVMQCLQIKQMAPSGQGGDRYRLVMSDGVNYVQT 62
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + + + ++ L R+ Y N + K + L++ EV+ + + KI
Sbjct: 63 MLATQANHVIHDNKLERGSLTRVKQYTPNNL--KGKNILVILDLEVIE-SFGAQEKIG-- 117
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
++ P+ E G K+EM K Q L P + ++
Sbjct: 118 ---DPVVLDPRPA-ETTIAGNDFYGSKKEEMDTKPQMQQLPSN-----PISATHAGANIY 168
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +L+P+ WTIK RVT K +++T+ GEG +F+V L DE G +I+AT FN+
Sbjct: 169 PIEALSPFSSKWTIKARVTFKSDIKTWHKPTGEGKLFSVNLLDESG-EIKATGFNDQCDA 227
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
FYD Q G VYYIS + +A KQF + NDYE+ + +E+A ++T +PQ +FNF
Sbjct: 228 FYDLLQEGSVYYISSPCRVSLAKKQFSNLPNDYELAFERETVIEKAEDQTN-VPQLRFNF 286
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I EL + V VD+IGV++ V+ I K + KR++T+ D+T +V V++W
Sbjct: 287 CTIQEL-QSVEKDSTVDVIGVLKEVAEVSEITSKKDGRPFQKRELTLVDDTGYSVRVTIW 345
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ A+ +A+ +VA K KV DF G SLS L T+ V PD+P+A +LK WY
Sbjct: 346 GKTASAF------DANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAYRLKGWY 399
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
+S G+ + A+ + G G + + + + +LG + +++IKA I +
Sbjct: 400 DSAGRTNTFATHQNLAGVAGATGRK----EEIKTISQVKDENLGVDDQAYYTIKATIVFV 455
Query: 475 KPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
K D Y AC + CNKKVT A+ G W CE C + ++ RYIM V D + W+
Sbjct: 456 KQDN-FCYPACSNQGCNKKVT-AMPDGTWQCEKCNVSHDKPDYRYIMQLNVADHTSHQWL 513
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
S F++ ++G SA+EL ELK DD + + V + R + + +R
Sbjct: 514 SCFDDTGRIVVGMSANELMELKEN--DDAKFMAAFEAVNCKKLVFRCRAKMDNFGDTQRV 571
Query: 592 RVTVRAVAPVDFAAESKFLLEEISK 616
R V + VD+ E L+E I +
Sbjct: 572 RYQVFSATLVDYKTEGNKLVELIKQ 596
>gi|360042651|emb|CCD78061.1| putative replication factor A 1, rfa1 [Schistosoma mansoni]
Length = 560
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 257/459 (55%), Gaps = 28/459 (6%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
RV P+ SLNPYQ WTI+ RV+ K +RT+ +G +FN L DE G +I+ T FN
Sbjct: 106 RVFPIQSLNPYQNRWTIRARVSQKSAIRTWSKQGRDGKLFNFTLVDESG-EIRVTGFNAE 164
Query: 233 ARKFYDRFQ-----LGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAF 286
KFYD + + KVYY+SR L+ ANKQF T NDYEM L+ +S+V + +T+
Sbjct: 165 VDKFYDMIEASNMFVNKVYYVSRANLKAANKQFNTTNNDYEMTLHSDSQVLPCEDSDTSS 224
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
+P+T FNF+ I +L G+ VDI+GVV SI K++ + KR++ + D +
Sbjct: 225 LPETHFNFISIGKLDTQSPGS-FVDIVGVVHECGEVQSITAKASQRELRKRELGLVDSSN 283
Query: 347 RTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DL 404
V ++LW E A N VG P++ IK+ K+ DF G SLS S++L+SP ++
Sbjct: 284 CLVRLTLWGEEAENFVGAS-------HPVIVIKAAKISDFNGRSLSVSPTSSLLISPTNI 336
Query: 405 PEAKKLKSWYESEGKGTSMAS-----IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD 459
PEA +LK WYE EG+ ++ + +GS G+ + + + L + ++ +
Sbjct: 337 PEAIRLKGWYEHEGRFSNFETFRSEMVGSSGGADGVSSSSGVLGGWNLLQDVKASGVGAN 396
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSG-YWCEGCQKNDEECSLRY 516
K +F+ KA + +K + M Y+AC T CNKKV D LG+G Y CE C + +C R
Sbjct: 397 VKADYFTCKATVVFMKKENFM-YQACSTEGCNKKVID-LGNGLYRCEKCARETPDCKWRL 454
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
+++A++ D +G+ W++ F + AE ++G +A++L +KS D+ + E + +
Sbjct: 455 LLMAKIADITGDLWVTCFQDAAEVLLGQTAEKLGTIKST-QDETQLEKVFIESAFNSWIF 513
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
R+ YN+E+R RV V V PVD S+ LL+ I+
Sbjct: 514 RLRAKVDRYNDEERLRVVVADVKPVDLVDYSRRLLKAIN 552
>gi|365990984|ref|XP_003672321.1| hypothetical protein NDAI_0J01860 [Naumovozyma dairenensis CBS 421]
gi|343771096|emb|CCD27078.1| hypothetical protein NDAI_0J01860 [Naumovozyma dairenensis CBS 421]
Length = 618
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 254/456 (55%), Gaps = 17/456 (3%)
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
P++ ++ + + L+PYQ WTIK RV+ KG ++ + N RG+G +FNV D G +
Sbjct: 171 PSSHSQKSKPIFAIEQLSPYQNIWTIKARVSYKGEIKKWHNQRGDGSLFNVNFLDTSG-E 229
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+AT FNE A KF + Q GKVYY+S+ L+ A QF + + YE+NL+ ++ +EE +E
Sbjct: 230 IRATAFNENAEKFSEILQEGKVYYVSKARLQPAKPQFTNLTHPYELNLDRDTVIEECFDE 289
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
+P+T FNF+ +D + N T VD++GV+Q V+P + ++ +RDI++ D
Sbjct: 290 DN-VPKTHFNFIKLDAIPNQENNTN-VDVLGVIQTVNPHFELTSRAGKRF-DRRDISIVD 346
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
E+ ++V LWN+ A + N + +VAIK ++V DF G SLS ST++ +P+
Sbjct: 347 ESGFEISVGLWNQQAIDF------NLPEGSVVAIKGVRVSDFGGKSLSMGFNSTLVPNPE 400
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGS--LAKNGARSMYSDRVSLTHITSNPSLGDEK 461
+PEA LK WY+S G+ + S+ GS ++ S R+++T + EK
Sbjct: 401 IPEAYSLKGWYDSTGRNGNFTSLKQEAGSNNISSANQEKFISQRITITRAQAENLGKSEK 460
Query: 462 PVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
+FS+KA IS +K D Y AC + CNKKV + + CE C+ N+E RY++
Sbjct: 461 GDYFSVKAAISFLKVDN-FAYPACSNENCNKKVIEQPDGTWRCEKCETNNEAPQWRYMLT 519
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
V D + + W+++FN++AE+++ A++L LK D + + + + R+
Sbjct: 520 ISVMDETNQLWLTLFNDQAEQLLDIDANKLIALKE--NDPEEFTKITQSIQMNQYDFRIR 577
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ YN++ R R TV + +++ E+ +L +S
Sbjct: 578 AREDSYNDQTRIRYTVANLHKLNYKGEADYLATRLS 613
>gi|432895940|ref|XP_004076236.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Oryzias latipes]
Length = 655
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 262/464 (56%), Gaps = 24/464 (5%)
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
+D N M ++ M +V P+ +LNPYQ WTI+ RVT+K N+R + N+RGEG +F+ E
Sbjct: 210 KDTNSPMKASSSSPM--KVFPISTLNPYQSKWTIRARVTNKSNVRQWSNSRGEGKLFSFE 267
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
+ DE G +I+ T FN KF+ + GKVYYIS+ TL+VANKQ+ T++NDYEM L+ +S
Sbjct: 268 VVDESG-EIKITAFNNEVDKFFSLLEQGKVYYISKATLKVANKQYSTLKNDYEMTLHAHS 326
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
+ + + IP NFV I+EL + ++D+IG+ + I K++ E V
Sbjct: 327 SIVPCEDNQS-IPTMNCNFVQIEELENR-DKDAIIDVIGICKKAEDVSRITTKNSRE-VS 383
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KR + + D + + VT +LW E A E D + + P+VAIK ++ DF G SLS L
Sbjct: 384 KRALHLIDSSGKEVTATLWGEEA-----EKFDGSGQ-PVVAIKGARLSDFGGRSLSALFS 437
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
ST++V+PD+PEA +L++WY+ EG + S+ + +G+R + +L+ + N
Sbjct: 438 STIMVNPDIPEAFRLRAWYDREGYAVNSQSLTERRST--NSGSRMNWK---TLSDV-KNE 491
Query: 456 SLGDE-KPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEEC 512
++G E K +FS A + ++ + + Y+AC + CNKKV Y CE C + +
Sbjct: 492 NMGHEDKAEYFSCLATVVYMRKENCL-YQACPSADCNKKVIIQHNGLYRCEKCNREFSDF 550
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWV 572
R+++ A + D W++ F E AE ++G SA L +L+ D+ ++ ++ +
Sbjct: 551 KYRFLLSANLADFGDNQWVTCFQETAEVLLGHSAQTLGQLRET--DEAAFDEVFQKANFR 608
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
H+ + V + YN+E R +VTV V PVD S+ LL I +
Sbjct: 609 THIFKNRVKLETYNDESRVKVTVMEVLPVDHREYSRRLLSNIRR 652
>gi|307170289|gb|EFN62644.1| Replication protein A 70 kDa DNA-binding subunit [Camponotus
floridanus]
Length = 608
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/611 (29%), Positives = 314/611 (51%), Gaps = 47/611 (7%)
Query: 24 DIPEIVVQVLDLK--------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNK-G 74
D+ + V Q+L K + +RY SDGK + + + +I NI +
Sbjct: 21 DVDKPVFQMLGYKKLPNKDGTIGNDRYRLLVSDGKNMNSFTMLATQLNHLIENNILTEYA 80
Query: 75 LIRLLDYALNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVK 132
+ ++ +Y L+ + + K ++ +++ EV +P ++ K+ + + I K + +
Sbjct: 81 ICKVSNYHLSSVNSGGKEKRVILIMGIEVTTPGSKVGCKL---GNPTNIESKSEADSTTA 137
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVR 192
G Q AQ N N ++ ++ T P+ +L+PYQ W IKVR
Sbjct: 138 DKSTGQTTGRYQ---TNGTAQ---RSNSNNYGSSDISTT----PIAALSPYQNKWVIKVR 187
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG VF+++L DE G +I+ T F + KFYD ++G VYYISR
Sbjct: 188 VTNKSPIRTWSNSRGEGKVFSMDLIDESG-EIRCTAFRDMCDKFYDMLEIGNVYYISRCQ 246
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L+ ANKQF +++NDYEM + ++E+ IP +FNF I ++ +++D+
Sbjct: 247 LKAANKQFNSLKNDYEMTMTNDTEIVPCHENIEDIPTLQFNFCSISQV-ENKERNDIIDV 305
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
+GVV + I +++ + KRDI + D++ V+V+LW + A + + +
Sbjct: 306 LGVVTTFNDVQHIVKRNTGQEFVKRDINIVDDSNAMVSVTLWGKQAEDF------DGSNN 359
Query: 373 PIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLG 431
PI+AIK ++G+F G +LS L ST+ PDLPEA +L+ WY + G +
Sbjct: 360 PIIAIKGARIGEFNGGKNLSLLNSSTLEKDPDLPEAHRLRGWYTTVGPSENAK------- 412
Query: 432 SLAKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRAC--KT 487
SL++ G ++ + + LG++ P +++ A I LI+ + ++ Y+AC ++
Sbjct: 413 SLSRVGGGGDFNAPLHTFEEATEARLGEKLNIPDSYTVMATICLIRVENSI-YKACPVES 471
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
C KK+ D + CE C ++ R + + D +G WI+ F+E+AE+I+G SA
Sbjct: 472 CKKKLIDQSTGIFRCEKCNRDYPNFVYRLLASMNIADATGSRWITAFSEDAEKILGMSAQ 531
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
EL ELK D+ +Y K + + + + + + +E R R T +VAP+++
Sbjct: 532 ELGELKEN--DNEAYMQKFGDANFKRFMFSLRAKSEVFQDEMRVRHTCSSVAPLNYKTHL 589
Query: 608 KFLLEEISKKV 618
L++++SK V
Sbjct: 590 THLIDKVSKLV 600
>gi|45198511|ref|NP_985540.1| AFL008Wp [Ashbya gossypii ATCC 10895]
gi|44984462|gb|AAS53364.1| AFL008Wp [Ashbya gossypii ATCC 10895]
Length = 694
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 254/448 (56%), Gaps = 18/448 (4%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
T+ + + L+PYQ WTIK RV+ KG+++T+ N RGEG +FNV D G +I+AT FN
Sbjct: 259 TKPIFAIEQLSPYQNMWTIKARVSFKGDIKTWHNQRGEGKLFNVNFLDTSG-EIRATAFN 317
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ A K+++ Q GKVYY+S+ ++ A QF +++ YE+ L+ ++ VEE E A +P+
Sbjct: 318 DNALKYFEILQEGKVYYVSKARIQPAKPQFSNLKHPYELQLDRDTVVEECF-EAADVPKM 376
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
F+F+ +D++ + VDI+GV+Q V+P + KS + +RDI + DET +V
Sbjct: 377 NFSFIKLDQISS-MEANSNVDILGVIQTVNPPFEMIAKSGKKF-NRRDIVIVDETGYSVN 434
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
V LWNE A + N + ++A+KS++V DF G SLS ST+ +PD+PEA +
Sbjct: 435 VGLWNEQAVDF------NLPEGSVIAVKSVRVTDFGGKSLSMGFSSTLHPNPDIPEAYAI 488
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
K WY S+G T+ S+ G +N R + +DR+++ + +K +F+++
Sbjct: 489 KGWYSSKGTSTTFHSLKMEGGD--RNSMRYV-ADRITIGKAKDDNLGRSDKGDYFNVRGA 545
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
++ +K D Y AC T C KKV + + CE CQ + RY++ A + D + +
Sbjct: 546 VNFLKVDNFA-YPACSTEGCQKKVIEQTDGTWRCEKCQVDHPAPKWRYMLTASILDETSQ 604
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
WI++FN++AE+++ A+ L ELK+ D +Q + V + RV + YN E
Sbjct: 605 IWITLFNDQAEKLLSMDANTLTELKNT--DPEKFQKVTQSVQMNEYDFRVRAREDTYNEE 662
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R R TV + P+ + E+ +L E++K
Sbjct: 663 TRIRYTVTNLYPLRWKVEADYLAGELTK 690
>gi|374108769|gb|AEY97675.1| FAFL008Wp [Ashbya gossypii FDAG1]
Length = 694
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 254/448 (56%), Gaps = 18/448 (4%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
T+ + + L+PYQ WTIK RV+ KG+++T+ N RGEG +FNV D G +I+AT FN
Sbjct: 259 TKPIFAIEQLSPYQNMWTIKARVSFKGDIKTWHNQRGEGKLFNVNFLDTSG-EIRATAFN 317
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ A K+++ Q GKVYY+S+ ++ A QF +++ YE+ L+ ++ VEE E A +P+
Sbjct: 318 DNALKYFEILQEGKVYYVSKARIQPAKPQFSNLKHPYELQLDRDTVVEECF-EAADVPKM 376
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
F+F+ +D++ + VDI+GV+Q V+P + KS + +RDI + DET +V
Sbjct: 377 NFSFIKLDQISS-MEANSNVDILGVIQTVNPPFEMIAKSGKKF-NRRDIVIVDETGYSVN 434
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
V LWNE A + N + ++A+KS++V DF G SLS ST+ +PD+PEA +
Sbjct: 435 VGLWNEQAVDF------NLPEGSVIAVKSVRVTDFGGKSLSMGFSSTLHPNPDIPEAYAI 488
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
K WY S+G T+ S+ G +N R + +DR+++ + +K +F+++
Sbjct: 489 KGWYSSKGTSTTFHSLKMEGGD--RNSMRYV-ADRITIGKAKDDNLGRSDKGDYFNVRGA 545
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
++ +K D Y AC T C KKV + + CE CQ + RY++ A + D + +
Sbjct: 546 VNFLKVDNFA-YPACSTEGCQKKVIEQTDGTWRCEKCQVDHPAPKWRYMLTASILDETSQ 604
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
WI++FN++AE+++ A+ L ELK+ D +Q + V + RV + YN E
Sbjct: 605 IWITLFNDQAEKLLSMDANTLTELKNT--DPEKFQKVTQSVQMNEYDFRVRAREDTYNEE 662
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R R TV + P+ + E+ +L E++K
Sbjct: 663 TRIRYTVTNLYPLRWKVEADYLAGELTK 690
>gi|74143871|dbj|BAE41250.1| unnamed protein product [Mus musculus]
gi|74195701|dbj|BAE39655.1| unnamed protein product [Mus musculus]
Length = 621
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 198/616 (32%), Positives = 313/616 (50%), Gaps = 44/616 (7%)
Query: 29 VVQVLDLK--LTGNR---YMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGNR Y SDG L + +L + L++ V G + + + ++ +
Sbjct: 24 ILQVINIRPISTGNRSPRYRLLMSDGLNTLSSFMLATQLNTLVEGGQLASNCVCQVHKFI 83
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKI--EVKSDESGIIFKPKQEDEVKKDGPGIVL 140
+N + K +++ EV+ A ++ +KI V +E + +Q+ + P
Sbjct: 84 VNTL-KDGRKVVVLMDLEVMKSAEDVGLKIGNPVPYNEGYGQQQQQQQQQQAVPSPASAA 142
Query: 141 -----KPKQEMVAKSAAQILRDQNGNMAPAARLAMT----------RRVHPLVSLNPYQG 185
KP+ + + G P + A T +V P+ SL PYQ
Sbjct: 143 TPPASKPQPQNGSLGMGSTAAKAYGASKPFGKPAGTGLLQPSGGTQSKVVPIASLTPYQS 202
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KV
Sbjct: 203 KWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKV 261
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
YY S+G L++ANKQF V+NDYEM N + V + +P +F+F I +L
Sbjct: 262 YYFSKGALKIANKQFSAVKNDYEMTFNNETSV-LPCEDGHHLPTVQFDFTGIGDLESKAK 320
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
LVDIIG+ ++ ++ I KSNN V KR+I + D + + VT +LW E A
Sbjct: 321 DA-LVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDADKF---- 375
Query: 366 LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS 425
+ + P++AIK +V DF G SLS L STV+V+PD+PEA KL+ W++SEG+ S
Sbjct: 376 --DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVS 433
Query: 426 IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRA 484
I S ++G + H + +LG +K +FS A + ++ + M Y+A
Sbjct: 434 I-----SDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAVVFLRKENCM-YQA 487
Query: 485 CKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
C T CNKKV D Y CE C + R I+ A + D W++ F E AE I+
Sbjct: 488 CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAIL 547
Query: 543 GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
G + L ELK + ++ +++ + + R+ V + YN+E R + TV V PVD
Sbjct: 548 GQNTMYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVD 605
Query: 603 FAAESKFLLEEISKKV 618
F + L+ I K +
Sbjct: 606 FRDYGRRLIANIRKNM 621
>gi|255982530|ref|NP_001157695.1| replication protein A 70 kDa DNA-binding subunit isoform 1 [Mus
musculus]
Length = 644
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 246/449 (54%), Gaps = 20/449 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 213 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 271
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+G L++ANKQF V+NDYEM N + V + +P +F
Sbjct: 272 VDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSV-LPCEDGHHLPTVQF 330
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L LVDIIG+ ++ ++ I KSNN V KR+I + D + + VT +
Sbjct: 331 DFTGIGDLESKAKDA-LVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTT 389
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 390 LWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 443
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYI 471
W++SEG+ SI S ++G + H + +LG +K +FS A +
Sbjct: 444 WFDSEGQALDGVSI-----SDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAV 498
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ + M Y+AC T CNKKV D Y CE C + R I+ A + D
Sbjct: 499 VFLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQ 557
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + YN+E
Sbjct: 558 WVTCFQESAEAILGQNTMYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYNDES 615
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISKKV 618
R + TV V PVDF + L+ I K +
Sbjct: 616 RIKATVMDVKPVDFRDYGRRLIANIRKNM 644
>gi|74214510|dbj|BAE31105.1| unnamed protein product [Mus musculus]
Length = 644
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 246/449 (54%), Gaps = 20/449 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 213 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 271
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+G L++ANKQF V+NDYEM N + V + +P +F
Sbjct: 272 VDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSV-LPCEDGHHLPTVQF 330
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L LVDIIG+ ++ ++ I KSNN V KR+I + D + + VT +
Sbjct: 331 DFTGIGDLESKAKDA-LVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTT 389
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 390 LWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 443
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYI 471
W++SEG+ SI S ++G + H + +LG +K +FS A +
Sbjct: 444 WFDSEGQALDGVSI-----SDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAV 498
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ + M Y+AC T CNKKV D Y CE C + R I+ A + D
Sbjct: 499 VFLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQ 557
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + YN+E
Sbjct: 558 WVTCFQESAEAILGQNTMYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYNDES 615
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISKKV 618
R + TV V PVDF + L+ I K +
Sbjct: 616 RIKATVMDVKPVDFRDYGRRLIANIRKNM 644
>gi|18390321|ref|NP_080929.1| replication protein A 70 kDa DNA-binding subunit isoform 2 [Mus
musculus]
gi|81879403|sp|Q8VEE4.1|RFA1_MOUSE RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|17512293|gb|AAH19119.1| Replication protein A1 [Mus musculus]
gi|74139176|dbj|BAE38476.1| unnamed protein product [Mus musculus]
gi|74139822|dbj|BAE31755.1| unnamed protein product [Mus musculus]
gi|74178123|dbj|BAE29849.1| unnamed protein product [Mus musculus]
gi|74195120|dbj|BAE28302.1| unnamed protein product [Mus musculus]
gi|74195944|dbj|BAE30530.1| unnamed protein product [Mus musculus]
gi|74222487|dbj|BAE38134.1| unnamed protein product [Mus musculus]
gi|148680853|gb|EDL12800.1| replication protein A1 [Mus musculus]
Length = 623
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 246/449 (54%), Gaps = 20/449 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 192 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 250
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+G L++ANKQF V+NDYEM N + V + +P +F
Sbjct: 251 VDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTFNNETSV-LPCEDGHHLPTVQF 309
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L LVDIIG+ ++ ++ I KSNN V KR+I + D + + VT +
Sbjct: 310 DFTGIGDLESKAKDA-LVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTT 368
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 369 LWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 422
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYI 471
W++SEG+ SI S ++G + H + +LG +K +FS A +
Sbjct: 423 WFDSEGQALDGVSI-----SDHRSGGAGGGNTNWKTLHEAKSENLGQGDKADYFSTVAAV 477
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ + M Y+AC T CNKKV D Y CE C + R I+ A + D
Sbjct: 478 VFLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQ 536
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + YN+E
Sbjct: 537 WVTCFQESAEAILGQNTMYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYNDES 594
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISKKV 618
R + TV V PVDF + L+ I K +
Sbjct: 595 RIKATVMDVKPVDFRDYGRRLIANIRKNM 623
>gi|350411045|ref|XP_003489220.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Bombus impatiens]
Length = 595
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 171/586 (29%), Positives = 307/586 (52%), Gaps = 44/586 (7%)
Query: 38 TGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEI--PTKSEKYL 94
+G RY SDGK+ +L + L+S + + + ++ YA++ + K ++ +
Sbjct: 36 SGERYRLLVSDGKRINSFTMLATQLNSMITDNVLTEFSICQINRYAISVVNNAGKQKRVM 95
Query: 95 IVTKCEVVSPALEMEIKIEVKSDESG-IIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ 153
++ + + ++V DE G I P D + P + ++ +
Sbjct: 96 VI-----------LSVDLKVAGDEVGRKIGNPTNADADGESKP-AQSVQSAQAASQQQSS 143
Query: 154 ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
++ +G + + ++ P+V+L+PYQ W IK RV +K +RT+ N+RGEG +F+
Sbjct: 144 LVSKHSGQQSSTSDISTI----PIVALSPYQNRWVIKARVVNKSAIRTWSNSRGEGKLFS 199
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
++L DE G +I+ T F + KFYD ++GKVYYISR +L+ ANKQF ++NDYEM L
Sbjct: 200 MDLVDESG-EIRCTAFRDQCDKFYDMIEIGKVYYISRASLKTANKQFNNLKNDYEMTLTG 258
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
+SE+ + IP +F+F+PI+++ + +++D++ +V++ + ++ +
Sbjct: 259 DSEIIPCHDIGDKIPTLQFDFIPINDIEQK-EKNDIIDVLAIVKSRGDLQMLVSRTTGKD 317
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLST 392
+ KRD+ + DE+ VT++LW A + + +P++AIK +VG+F G +LST
Sbjct: 318 MKKRDVNLIDESNTMVTLTLWGTQAEEF------SGNDNPVLAIKGARVGEFNGGKNLST 371
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT 452
L + V + PD+PEA +L+ W+ + G + GS A+ +L I
Sbjct: 372 LSGTAVQIDPDIPEAHRLRGWFNTTGCHEEAKPLSRAFGSAAQMSQ--------ALITIG 423
Query: 453 SNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKN 508
S D+K P F++KA I+L++ + + Y++C + C KKV D Y CE C K
Sbjct: 424 EANSQIDKKNGPEIFTVKATINLLRTENIL-YKSCPSENCKKKVIDQANGMYRCEKCNKE 482
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
R + + D + W++ FN+E E+I+G +A EL ELK D+++Y KL E
Sbjct: 483 FPNFKYRLLGSLSLADWTDNMWVTAFNDETEKILGITAQELGELKEN--DNDAYLEKLGE 540
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
VT+ + ++ + + +E R R T V+P D A ++ L+ ++
Sbjct: 541 VTFKSFIFKIRTKMETFGDENRLRSTCIDVSPTDCKAYNEDLITKL 586
>gi|400598555|gb|EJP66264.1| replication factor-a protein 1 [Beauveria bassiana ARSEF 2860]
Length = 597
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 304/625 (48%), Gaps = 46/625 (7%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKA 55
+ +S ++ I ++P ++ + P V+Q L +K G+RY SDG+ ++
Sbjct: 4 ESALSKGSLDLIFNDPDK-AAKEFPVPVMQCLQVKQMAPSAQGGDRYRLVMSDGQHYVQT 62
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + + V + + R+ Y N + K + LI+ EV+
Sbjct: 63 MLATQANHVVHEDKLVRGCIARIKQYTPNNL--KGKNILIILDIEVI------------- 107
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
+ GI+ K + V+ + K + Q+ PA + ++
Sbjct: 108 -ENYGILDKIGEPSAVESRAAETTIAGNDFYGVKKEEKPTPQQSMPSRPA--MHAGNNIY 164
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P+ WTIK RVTSK +++T+ A GEG +F+V L DE G +I+AT FN+
Sbjct: 165 PIEGLSPFSHKWTIKARVTSKSDIKTWHKATGEGKLFSVNLLDESG-EIKATGFNDQCDA 223
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
FY+ Q G VYYIS + +A KQF + NDYE+ ++ +E+A ++T +PQ +FNF
Sbjct: 224 FYELLQEGSVYYISTPCRVNLAKKQFSNLPNDYELAFERDTVIEKAEDQTN-VPQVRFNF 282
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I+EL + V VDIIGV++ I K KR++T+ D+T +V V++W
Sbjct: 283 STIEEL-QSVEKDNTVDIIGVLKEAGEVSEIVSKKTGAPYQKRELTMVDDTGYSVRVTIW 341
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ A++ +A ++A K KV DF G SLS L T+ V PD+P+A +LK WY
Sbjct: 342 GKTASSF------DAQPESVIAFKGTKVSDFGGKSLSLLSSGTISVDPDIPDAHRLKGWY 395
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
+S G+ + A+ +LA GA + +D + +LG + +++IKA I +
Sbjct: 396 DSSGRNDTFAT----HQNLASVGAAAGRNDEIKTIAQVKEENLGVDDQAYYTIKATIVFV 451
Query: 475 KPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
K D Y AC + CNKKV D +G G W CE C + ++ RY++ V D + W+
Sbjct: 452 KQDN-FCYPACLSQGCNKKVQD-MGDGTWRCEKCNLSHDKPEYRYVLSFNVADHTSHQWL 509
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
S F++ I+G SADEL ELK D+ + + V R Y +R
Sbjct: 510 SCFDDSGRAIVGMSADELMELKEN--DEAKFLAAFEAVNCKKLQFRCRARMDNYGEVQRV 567
Query: 592 RVTVRAVAPVDFAAESKFLLEEISK 616
R V + +DF +E L E I +
Sbjct: 568 RYQVMTASFLDFKSEGAKLAEMIKQ 592
>gi|255723748|ref|XP_002546803.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134694|gb|EER34248.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 620
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 171/609 (28%), Positives = 304/609 (49%), Gaps = 44/609 (7%)
Query: 30 VQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTK 89
++ +DL +Y +DG ++ + + + N Q ++++ ++ I
Sbjct: 31 IKSVDLPNDVKKYRILLNDGVYSTHGLIDETCNEYIKNNNCQRYSIVQVNSFS---IFAT 87
Query: 90 SEKYLIVTKCEVVSPALE--------MEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLK 141
+ + ++ E++SP E ++ +E + K E + + +
Sbjct: 88 QKHFFVIKNLEILSPTSEKSSVPLIPLDTYFAEHPNEGHLTLTKKSEGDSPAPATPSIPQ 147
Query: 142 PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRT 201
V AQ+ + N A +AR R + + ++PYQ NWTIK RV+ KG++RT
Sbjct: 148 ATTASVQPFQAQVKQPVPANTAASARGPAPRTLS-IELISPYQNNWTIKARVSYKGDLRT 206
Query: 202 YKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFK 261
+ N++GEG VF+V DE +I+A+ FNE A + Y + GKVYYIS+ ++ A K+F
Sbjct: 207 WSNSKGEGKVFSVNFLDE-SDEIKASAFNETAERAYRSLEEGKVYYISKARVQAARKKFN 265
Query: 262 TVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSP 321
T+ + YE+ L+ ++E+ E +E+ +P+ FNFV +D++ + + ++D+IGV++ V P
Sbjct: 266 TLSHPYELTLDRDTEITECFDESD-VPKLNFNFVKLDQV-QNLEANSIIDVIGVLKTVLP 323
Query: 322 TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLK 381
+I KS + +R+I++ DET +V + LWN A + E + +VA K K
Sbjct: 324 PFTITAKSTGKEFNRRNISIVDETGFSVELGLWNNTAMDFSVE------EGTVVAFKGCK 377
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
V DF G +LS +++ +P PE+ LK WY++ G ++ + S G R
Sbjct: 378 VTDFNGKTLSLTQAGSIVPNPGTPESFTLKGWYDNVGVNEQFKTLKTDKNS----GDR-- 431
Query: 442 YSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC-------------KTC 488
+ RVS+ +KP +FS+KA I+ KPD Y AC + C
Sbjct: 432 IAQRVSIAQALEEHVGTGDKPDYFSVKASITFCKPDN-FAYPACTNQVQHGDGSRPPQLC 490
Query: 489 NKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
NKK+ G W CE C N ++ + RYI+ V D +G+ W+++F+E+A++++ A
Sbjct: 491 NKKLIYQDHDGTWRCEKCDANYDQAAYRYILSCSVTDSTGQMWLTLFDEQAKKLLDIDAT 550
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
EL K + D S V + + RV Q YN+E + R + +++ +E+
Sbjct: 551 ELQRKKEENPDAAS--AIFTSVLFKEFVFRVRARQDTYNDELKTRYQAAGLYDINYTSEA 608
Query: 608 KFLLEEISK 616
+FL +E+ +
Sbjct: 609 EFLTKELDQ 617
>gi|355717104|gb|AES05824.1| replication protein A1, 70kDa [Mustela putorius furo]
Length = 615
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 244/449 (54%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 241
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ + KVYYIS+G L++ANKQF V+NDYEM N + V + +P +F
Sbjct: 242 VDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSV-TPCEDGHHLPTVQF 300
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + L+DIIG+ ++ I KSNN V KR+I + D + + VT +
Sbjct: 301 DFTGIGDLENKPKDS-LIDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTAT 359
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 360 LWGEDADRF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 413
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG +++Y + + N GD+ F S+
Sbjct: 414 WFDSEGQALDGISISDVKSGGTGGINTNWKTLYEAK------SENLGHGDKADYFSSVAT 467
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ L K + Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 468 IVYLRK--ENCIYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQE 525
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE IIG S L ELK + ++ +++ + + + R+ V + YN+
Sbjct: 526 NQWVTCFQESAEAIIGQSTAHLGELKEK--NEQAFEEVFQNANFRSFIFRIRVKLETYND 583
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 584 ESRIKATVIDVKPVDYKEYGRRLIMNIRR 612
>gi|46137213|ref|XP_390298.1| hypothetical protein FG10122.1 [Gibberella zeae PH-1]
Length = 607
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 191/629 (30%), Positives = 315/629 (50%), Gaps = 47/629 (7%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKAI 56
+ +S A+ I ++P ++ P V+Q L +K G+R+ SDG+ ++ +
Sbjct: 5 EALSQGALDVIFNDPDK-ATKLFPVPVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYVQTM 63
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
L + + V + R+ Y N + K + L++ EV+ +L ++ KI
Sbjct: 64 LATQANHVVHDNKLVRGCFARIKQYTPNNL--KGKNILVILDIEVIE-SLGIQEKI---G 117
Query: 117 DESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHP 176
+ S KP ++ G +K ++ +K+ Q + Q +M + ++P
Sbjct: 118 EPSAFDAKPAGQESAIAGGDFYGVKKEE---SKTQPQQFQQQQQSMPSRPAMHAGSNIYP 174
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ L+P+ WTIK RVT+K +++T+ A GEG +F+V L DE G +I+AT FN+
Sbjct: 175 IEGLSPFAHKWTIKARVTAKSDIKTWHKATGEGKLFSVNLLDESG-EIKATGFNDQCDAL 233
Query: 237 YDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
YD+ Q G VYYIS +++A KQF + NDYE+ ++ VE+A ++T +PQ +FNF
Sbjct: 234 YDQLQEGSVYYISTPCRVQLAKKQFSNLPNDYELTFERDTVVEKAEDQTN-VPQVRFNFC 292
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I EL + V VD+IGV++ V I K + KR++T+ D+T +V V++W
Sbjct: 293 SIQEL-QSVEKDNTVDVIGVLKEVGEIGDITSKKDGRPFQKRELTLVDDTGFSVRVTIWG 351
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
+ A + D A +S +VA K KV DF G SLS L T+ V PD+P+A +LK WY+
Sbjct: 352 KNANS-----FDAAPES-VVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYD 405
Query: 416 SEGKGTS------MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
S G+ + MAS+GS G D ++ + + +LG + +++IKA
Sbjct: 406 SAGRTDTFATHQNMASVGSATGR---------KEDLKTIAQV-KDENLGMDDQAYYTIKA 455
Query: 470 YISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
I +K + Y AC + CNKKVT + CE C + E+ RY++ V D +
Sbjct: 456 TIVFVKQEN-FCYAACLSQGCNKKVTQMPDGTWQCEKCNLSHEKPEYRYVLSLNVADHTS 514
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F++ +++G +ADE+ ELK DD +E R +
Sbjct: 515 HQWLTGFDDFGRQVMGRTADEMMELKEN--DDTKLTAAFEEANCKKFTFRCRAKMDNFGE 572
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+R R V +V P+DF +E L E I +
Sbjct: 573 AQRIRYQVMSVTPLDFKSEGTKLAELIKQ 601
>gi|408398028|gb|EKJ77164.1| hypothetical protein FPSE_02614 [Fusarium pseudograminearum CS3096]
Length = 607
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 315/629 (50%), Gaps = 47/629 (7%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKAI 56
+ +S A+ I ++P ++ P V+Q L +K G+R+ SDG+ ++ +
Sbjct: 5 EALSQGALDVIFNDPDK-ATKLFPVPVLQCLQVKQMAPSAQGGDRFRLVMSDGQHYVQTM 63
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
L + + V + R+ Y N + K + L++ EV+ +L ++ KI
Sbjct: 64 LATQANHVVHDNKLVRGCFARIKQYTPNNL--KGKNILVILDIEVIE-SLGIQEKI---G 117
Query: 117 DESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHP 176
+ S KP ++ G K ++ +K+ Q ++Q +M + ++P
Sbjct: 118 EPSAFDAKPAGQESAIAGGDFYGAKKEE---SKTQPQQFQEQQQSMPSRPAMHAGSNIYP 174
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ L+P+ WTIK RVT+K +++T+ A GEG +F+V L DE G +I+AT FN+
Sbjct: 175 IEGLSPFAHKWTIKARVTAKSDIKTWHKATGEGKLFSVNLLDESG-EIKATGFNDQCDAL 233
Query: 237 YDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
YD+ Q G VYYIS +++A KQF + NDYE+ ++ VE+A ++T +PQ +FNF
Sbjct: 234 YDQLQEGSVYYISTPCRVQLAKKQFSNLPNDYELTFERDTVVEKAEDQTN-VPQVRFNFC 292
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I EL + V VD+IGV++ V I K + KR++T+ D+T +V V++W
Sbjct: 293 SIQEL-QSVEKDNTVDVIGVLKEVGEIGDITSKKDGRPFQKRELTLVDDTGFSVRVTIWG 351
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
+ A + D A +S +VA K KV DF G SLS L T+ V PD+P+A +LK WY+
Sbjct: 352 KNANS-----FDAAPES-VVAFKGTKVSDFGGKSLSLLSSGTMTVDPDIPDAHRLKGWYD 405
Query: 416 SEGKGTS------MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
S G+ + MAS+GS G D ++ + + +LG + +++IKA
Sbjct: 406 SAGRTDTFATHQNMASVGSATGR---------KEDLKTIAQV-KDENLGMDDQAYYTIKA 455
Query: 470 YISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
I +K + Y AC + CNKKVT + CE C + E+ RYI+ V D +
Sbjct: 456 TIVFVKQEN-FCYAACLSQGCNKKVTQMPDGTWQCEKCNLSHEKPEYRYILSLNVADHTS 514
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F++ +++G +ADE+ ELK DD +E R +
Sbjct: 515 HQWLTGFDDFGRQVMGRTADEMMELKEN--DDTKLTAAFEEANCKKFTFRCRAKMDNFGE 572
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+R R V +V P+DF +E L E I +
Sbjct: 573 AQRIRYQVMSVTPLDFKSEGTKLDELIKQ 601
>gi|410980231|ref|XP_003996481.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Felis
catus]
Length = 701
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 251/461 (54%), Gaps = 24/461 (5%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N+A +V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE
Sbjct: 159 NLANIGSGGTQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDES 218
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+AT FNE KF+ + KVYYIS+GTL++ANKQF V+NDYEM N + V
Sbjct: 219 G-EIRATAFNEQVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSV-VP 276
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ +P +F+F I +L + L+DIIG+ ++ I KSNN V KRDI
Sbjct: 277 CEDGHHLPTVQFDFTAIGDLENKSKDS-LIDIIGICKSYEDATKITVKSNNREVSKRDIY 335
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
+ D + + VT +LW E A + + P++AIK +V DF G SLS L STV++
Sbjct: 336 LMDMSGKVVTATLWGEDADRF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIM 389
Query: 401 SPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
+PD+PEA KL+ W++SEG+ G S++ + SG + +++Y + + N
Sbjct: 390 NPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGTGGSNTNWKTLYEVK------SENLGH 443
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
GD K +FS A + ++ + M Y+AC + C KKV D Y CE C R
Sbjct: 444 GD-KADYFSCVATVVFLRKENCM-YQACPAQDCFKKVIDQQNGLYRCEKCDSEFPSFKYR 501
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
I+ A + D W++ F E AE IIG + + ELK + ++ +++ + + +
Sbjct: 502 MILSANIADFQENQWVTCFQESAEAIIGQTTAYIGELKEK--NEQAFEEVFQNANFRTFI 559
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ V + YN+E R + TV V PVD+ K L+ I +
Sbjct: 560 FKIRVKLETYNDESRIKATVMDVKPVDYREYGKRLIMNIKR 600
>gi|301765316|ref|XP_002918075.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Ailuropoda melanoleuca]
Length = 603
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 246/449 (54%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 170 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 228
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ + KVYYIS+G L++ANKQF V+NDYEM N + V + +P +F
Sbjct: 229 VDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSV-MPCEDGHHLPTVQF 287
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + L+DIIG+ ++ I KSNN V KR+I + D + + VT +
Sbjct: 288 DFTGIGDLENKPKDS-LIDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTAT 346
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 347 LWGEDADRF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 400
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD K +FS A
Sbjct: 401 WFDSEGQALDGVSISDLKSGGTGGSNTNWKTLYEVK------SENLGHGD-KADYFSSVA 453
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 454 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQE 512
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE IIG S L ELK + ++ +++ + + R+ V + YN+
Sbjct: 513 NQWVTCFQESAEAIIGQSTSYLGELKDK--NEQAFEEIFQNANFRSFTFRIRVKLETYND 570
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 571 ESRIKATVMDVKPVDYREYGRRLIMNIRR 599
>gi|255715099|ref|XP_002553831.1| KLTH0E08118p [Lachancea thermotolerans]
gi|238935213|emb|CAR23394.1| KLTH0E08118p [Lachancea thermotolerans CBS 6340]
Length = 624
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 253/448 (56%), Gaps = 18/448 (4%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
R + + L+PYQ WTIK RV+ KG+++T+ N RGEG +FNV L D G +I+AT F+E
Sbjct: 188 RPIFAIEQLSPYQNMWTIKARVSFKGDIKTWSNQRGEGKLFNVNLLDNSG-EIRATTFSE 246
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KFY+ Q GKVYY+S+ ++ + QF + + YE+ L+ ++ VEE ++ +P+
Sbjct: 247 NVDKFYNLLQEGKVYYVSKARIQPSKPQFSNLAHPYELQLDRDTVVEECFDDVD-VPKMN 305
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F+FV ++ + +VD+IG+++ V+P I K+ +RDI + D++ +V V
Sbjct: 306 FSFVKLNTM-ESQEANSIVDVIGIIRTVNPPFEITSKAGKRF-DRRDIILVDDSGYSVNV 363
Query: 352 SLWNELATNVGQELLD-NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
LW GQ+ L+ N + +VAIK +V DF G LS ST+ SP++PEA +
Sbjct: 364 GLW-------GQQALEFNLPEGSVVAIKGGRVTDFNGKGLSMGFNSTMHPSPEVPEAYAI 416
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
K WY+S G+ S+ G+ N AR + ++R+S+ ++ E+ +FSIKA
Sbjct: 417 KGWYDSVGRNAQFHSLKQEPGAGGGNAARFI-ANRISIAKAQADNLGMSERGDYFSIKAA 475
Query: 471 ISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
+S ++ D + Y AC + CNKKV + + CE C N E RY++ V D +G+
Sbjct: 476 VSYLRVDN-LAYPACANENCNKKVIEEPDGTWRCEKCDANHPEPQFRYMLTVSVLDETGQ 534
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W+++FNE+AE+++G A+ + +K + D + + +++ + RV YN+E
Sbjct: 535 IWLTLFNEQAEQLLGVDANSM--VKYKESDPSKFARITQKIQMNQYDFRVRARADNYNDE 592
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R R T V + F AE++FL EE+ K
Sbjct: 593 TRIRYTAANVHNLRFGAEAEFLAEELGK 620
>gi|358395596|gb|EHK44983.1| hypothetical protein TRIATDRAFT_139326 [Trichoderma atroviride IMI
206040]
Length = 600
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 309/625 (49%), Gaps = 47/625 (7%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLKAILP 58
+S I+ I ++P ++ P V+Q L +K G +R+ SDG ++ +L
Sbjct: 7 LSRGCINAIFNDPD-QAAKLFPVPVMQCLQIKQMGPSGQGGDRWRLVMSDGNNYVQTMLA 65
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
+ + + G ++ + R+ Y N + K++++ V +L + KI
Sbjct: 66 TAANHIIHDGKLERGCIARVKKYQPNIL---KGKHILIILEIEVIESLGLHDKIG----- 117
Query: 119 SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTR---RVH 175
+ ++ +PK D DG K+EM K Q PA + T ++
Sbjct: 118 NPVVHEPKAADATI-DGNDFYGAKKEEMDTKPQMQ-------QHQPAPSRSATHAGANIY 169
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +L+P+ WTIK RVT K +++T+ GEG +F+V L DE G +I+AT FN+
Sbjct: 170 PIEALSPFSHKWTIKARVTFKSDIKTWHKPTGEGKLFSVNLLDESG-EIKATGFNDQCDA 228
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
FYD Q G VYYIS + +A KQF + NDYE+ + +E+A ++T +PQ +FNF
Sbjct: 229 FYDLLQEGSVYYISTPCRVALAKKQFSNLSNDYELTFERETVIEKAEDQTN-VPQLRFNF 287
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I EL + V VD+IGV++ V+ I K + KR++T+ D+T +V V++W
Sbjct: 288 CSIQEL-QSVEKDSTVDVIGVLKEVAEVSEITSKKDGRPFQKRELTLVDDTGYSVRVTIW 346
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ A +A+ +VA K KV DF G SLS L T+ V+PD+P+A +LK WY
Sbjct: 347 GKTANGF------DANPESVVAFKGTKVSDFGGKSLSLLSSGTMTVNPDIPDAYRLKGWY 400
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
+S G+ + A+ + G G + D + + +LG + +++IKA I +
Sbjct: 401 DSAGRTDTFATHQNLAGVAGATGRK----DDIKTISQVKDENLGVDDQAYYTIKATIVFV 456
Query: 475 KPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
K D + Y AC T CNKKVT ++ G W CE C + + RYI+ V D + W+
Sbjct: 457 KQD-SFCYPACSTQGCNKKVT-SMPDGTWHCEKCNVSHDRPDYRYILNLNVADHTSHQWL 514
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
S F++ I+G SA+EL ELK DD + + V R + + +R
Sbjct: 515 SCFDDTGRIIVGMSANELMELKEN--DDAKFMAAFEAVNCKKLTFRCRAKLDHFGDTQRV 572
Query: 592 RVTVRAVAPVDFAAESKFLLEEISK 616
R V + A +D+ E L+E I +
Sbjct: 573 RYQVLSAALMDYKTEGDKLVELIKQ 597
>gi|357134970|ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 945
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 258/465 (55%), Gaps = 24/465 (5%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P A+ RV P+ +LNPYQ WTIK RVT+K + + NA G G VFN +L D
Sbjct: 265 NSGPVAKNEAPPRVTPISALNPYQTTWTIKARVTAKSRVTHFINASGPGTVFNFDLLDAH 324
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+A F A +FY+ ++ KVY ISRG +R A K+F + NDY++ L+ ++ +E
Sbjct: 325 GGEIRAKCFKAAVDQFYNLIEVDKVYLISRGAIRPAQKKFNPLNNDYDLTLDVSTSIEIC 384
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+ + IP+ +FNF I E+ ++G +VD++GVV +VSPT+ + +K NE KR++
Sbjct: 385 SGDDSSIPRQQFNFRQISEIAN-MDGGSMVDLLGVVTSVSPTVPLMKKDGNE-TKKRNLQ 442
Query: 341 VADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + +V ++ W + GQ+L L ++ SP++ +KS +V DF G S+ T+ S +
Sbjct: 443 LKDMSGCSVEITFWGDFCDAEGQQLQSLCDSGSSPMLVLKSGRVNDFNGKSVGTISSSLI 502
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
++PD P+A++L+ WY +EGK + +S+ S+A G + R ++ I
Sbjct: 503 KINPDFPDAERLRQWYITEGKNAACSSL-----SVATMGRTDV---RKTIAEIKGENLGQ 554
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEE 511
+KP + ++ I I D Y AC + CNKKVT+ G G W C+ C+++
Sbjct: 555 SDKPAWITVIGSIFHIAND-PFCYPACTMQVNGRQCNKKVTNN-GDGMWYCDKCEQSSPN 612
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C RY++ ++ D +G + + F E + IIG +A EL +K + DD + ++
Sbjct: 613 CEYRYLLNCQMQDHTGSTYCNAFQEAGKDIIGVTAQELFRIKHEEQDDVQFAEIMQRARH 672
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
LL++ V ++ YN+E R + T+ +D + +FLL I +
Sbjct: 673 QLFLLKLKVKEEIYNDEARVKYTIFKAEKLD---DPRFLLGIIDR 714
>gi|281342356|gb|EFB17940.1| hypothetical protein PANDA_006470 [Ailuropoda melanoleuca]
Length = 563
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 246/449 (54%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 130 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 188
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ + KVYYIS+G L++ANKQF V+NDYEM N + V + +P +F
Sbjct: 189 VDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSV-MPCEDGHHLPTVQF 247
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + L+DIIG+ ++ I KSNN V KR+I + D + + VT +
Sbjct: 248 DFTGIGDLENKPKDS-LIDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTAT 306
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+V+PD+PEA KL+
Sbjct: 307 LWGEDADRF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRG 360
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + +++Y + + N GD K +FS A
Sbjct: 361 WFDSEGQALDGVSISDLKSGGTGGSNTNWKTLYEVK------SENLGHGD-KADYFSSVA 413
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC T CNKKV D Y CE C R I+ + D
Sbjct: 414 TVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQE 472
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE IIG S L ELK + ++ +++ + + R+ V + YN+
Sbjct: 473 NQWVTCFQESAEAIIGQSTSYLGELKDK--NEQAFEEIFQNANFRSFTFRIRVKLETYND 530
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I +
Sbjct: 531 ESRIKATVMDVKPVDYREYGRRLIMNIRR 559
>gi|392567006|gb|EIW60181.1| replication factor-a protein [Trametes versicolor FP-101664 SS1]
Length = 561
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 193/579 (33%), Positives = 299/579 (51%), Gaps = 38/579 (6%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+RY SDG+ L+++L + L+ V I + + + N + K K LI+
Sbjct: 2 DRYRVIVSDGEHFLQSMLATQLNHLVEEEQILKHSIAVIEKFTCNLVQGK--KLLIILAL 59
Query: 100 EVVSPALE-MEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRD- 157
VV E + + +++ G I P KP V+ + AQ R
Sbjct: 60 RVVQKEAEKIGNPVGIQARAGGSIEAQASPSAAVTPAPAASTKP---AVSAAPAQSSRQP 116
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT 217
GN R A ++P+ SL+PYQ +WTIK RV SK +RT+ N RGEG +FN+ L
Sbjct: 117 TQGNRG--GRTA----IYPIESLSPYQNHWTIKARVISKSEIRTWSNQRGEGKLFNITLM 170
Query: 218 DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV 277
DE G +I+AT FN + YDR Q GKVY+IS+ + +A K+F + N+YE+ L N+E+
Sbjct: 171 DESG-EIRATGFNATVDELYDRIQEGKVYFISKAKVNLAKKKFSNIANEYELALERNTEI 229
Query: 278 EEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKR 337
EE + A +P KFNF PI L + + + DI+GVV+ V SI K+ ++ +PK+
Sbjct: 230 EEC-PDAADVPTVKFNFTPIANL-QEIAKDAVCDIVGVVKEVGELSSITSKATSKQIPKK 287
Query: 338 DITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST 397
++TV D + +V V+LW + A E + D P++A K KVGDFQG SLS + S+
Sbjct: 288 ELTVVDASGFSVKVTLWGKQA-----EQYNEVD-YPVIAFKGAKVGDFQGRSLSMMSSSS 341
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI----TS 453
++++PD+PEA L+ WY++ G + + S +++ G S DR + + TS
Sbjct: 342 LIINPDIPEAHHLRGWYDAAG---AEQTYQSHTNTMSSGGGVSF--DRAEIRSLNDVKTS 396
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
+ D K FS +A I IK D + Y AC + CNKKV +G + CE C K+ +
Sbjct: 397 ELGMSD-KVDTFSSRATIMHIKGDN-IAYPACPSQGCNKKVV-LMGDSWRCENCDKSYPQ 453
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
RYI+ V D SG+AW FN+ + G A++L +K + DD + L+
Sbjct: 454 PEHRYIVPMAVADYSGQAWFQGFNDVGLIVFGMPANDLVAIKER--DDTEFNRVLEGTIG 511
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
+ Q YN++ R R + + P+D+ E+ +L
Sbjct: 512 TTYNFACRAKQDNYNDQARVRYGISRILPLDYREEATYL 550
>gi|291405375|ref|XP_002719090.1| PREDICTED: replication protein A1 [Oryctolagus cuniculus]
Length = 613
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 315/621 (50%), Gaps = 59/621 (9%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
++QV++++ TGN RY SDG L + +L + L+ V + + + ++ +
Sbjct: 21 ILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEEERLSSNCICQVNRFI 80
Query: 83 LNEIPTKSEKYLIVTKCEVV--SPALEMEIKIEVKSDE---------------SGIIFKP 125
+N + + +I+ + EV+ + A+ M+I V +E S KP
Sbjct: 81 VNTL-KDGRRVVILMEVEVLKSAEAVGMKIGNPVPYNEGHGQQQALPPPVTAASAPASKP 139
Query: 126 KQEDEVKKDGPGIVLK-PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQ 184
+Q++ GP + + KS L + G +V P+ SL PYQ
Sbjct: 140 QQQNGSAGMGPPVSKSFGASKAFGKSGGSSLLNTAG--------GTQSKVVPIASLTPYQ 191
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ K
Sbjct: 192 SKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQVDKFFPLIEVNK 250
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNL-NENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
VYY S+GTL++ANKQF V+NDYEM NE S + + +P +F F ID L
Sbjct: 251 VYYFSKGTLKIANKQFTAVKNDYEMTFVNETSVM--PCEDGHHLPTVQFAFTGIDALENK 308
Query: 304 VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
+ LVDIIG+ ++ I KSNN V KR+I + D + + VT +LW E A
Sbjct: 309 PKDS-LVDIIGICKSYEDATKITVKSNNREVAKRNIYLMDTSGKVVTATLWGEDADRF-- 365
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---G 420
+ + P++AIK +V DF G SLS L STV+V+PD+PEA KL+ W++SEG+ G
Sbjct: 366 ----DGSRQPVLAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDG 421
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
S++ + SG + +++Y + + N GD K +FS A + ++ + M
Sbjct: 422 VSISDLKSGGMGGSNTNWKTLYEVK------SENLGQGD-KADYFSSVATVVYLRKENCM 474
Query: 481 WYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
Y+AC T CNKKV D Y CE C R I+ + D W++ F E A
Sbjct: 475 -YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESA 533
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
E I+G + L ELK + ++ +++ + + R+ V + YN+E R + TV V
Sbjct: 534 EAILGQNTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDV 591
Query: 599 APVDFAAESKFLLEEISKKVS 619
PVD+ ++ L+ I + +
Sbjct: 592 KPVDYREHARRLIMNIRRNAA 612
>gi|395333749|gb|EJF66126.1| replication factor-a protein [Dichomitus squalens LYAD-421 SS1]
Length = 601
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 304/586 (51%), Gaps = 51/586 (8%)
Query: 38 TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVT 97
T +RY SDG+ L+++L + ++ V I + + +++N + + ++ LI+
Sbjct: 47 TQDRYRVIVSDGEHFLQSMLATQMNYIVEEDQIAKGTIATIEKFSVNLV--QGKRLLII- 103
Query: 98 KCEVVSPALEMEIKIEVKSDE---SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQI 154
+ +K+ VK E S +P+ ED P + P +AA
Sbjct: 104 ----------LALKVLVKHAEKIGSPKALQPRGEDGAPASAP-VTPGPSTSTTPAAAAVP 152
Query: 155 LRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNV 214
R Q A R V+P+ SL+PYQ +WTIK RVT+K ++RT+ N RGEG +F+V
Sbjct: 153 ARQQT----QAGRGGRAAAVYPIESLSPYQTHWTIKARVTNKSDIRTWSNQRGEGKLFSV 208
Query: 215 ELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNEN 274
L DE G +I+AT FN A + YDR Q GKVY IS+ + +A K+F V N+YE+ +
Sbjct: 209 TLMDESG-EIRATAFNAAVDELYDRLQDGKVYLISKAKVNLAKKKFSNVNNEYELTFERS 267
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
+EVEE + T +P KFNF+ I L + V D+IGVV++VS SI K+ ++ +
Sbjct: 268 TEVEECHDATD-VPTVKFNFINISSL-QDVAKDSTCDVIGVVKDVSELSSITSKATSK-I 324
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
PKR++T+ D + +V ++LW + A E D D P++A K KVGDFQG SLS +
Sbjct: 325 PKRELTIVDRSGYSVRMTLWGKQA-----EQYDENDH-PVIAFKGAKVGDFQGRSLSMMS 378
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMAS-----IGSGLGSLAKNGARSMYSDRVSLT 449
ST+ V+PD+PEA L+ WY++ G S + G + + R++ +VS
Sbjct: 379 SSTMHVNPDIPEAHALRGWYDAAGADQQFQSHTVTMVSGGGITFDRAEIRNLNDVKVS-- 436
Query: 450 HITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQ 506
LG +KP F +A I IK D + Y AC T C KKV +G + CE C
Sbjct: 437 ------ELGMFDKPDNFCARATIMHIKSDN-ISYPACPTTGCGKKVLQ-MGESWRCEKCD 488
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL 566
K+ + RY++ V D SG+AW FN+ + + G +ADEL E+K + ++ Y +
Sbjct: 489 KSFPKPEHRYMVAMAVSDYSGQAWFQGFNDVGQTVFGMTADELVEIKDR--EELQYNTVI 546
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLE 612
Q YN++ R R + + P+++ E+K+L +
Sbjct: 547 NASIGKTFNFTCRAKQDTYNDQTRVRYGISRILPLNYREEAKYLAD 592
>gi|260950665|ref|XP_002619629.1| hypothetical protein CLUG_00788 [Clavispora lusitaniae ATCC 42720]
gi|238847201|gb|EEQ36665.1| hypothetical protein CLUG_00788 [Clavispora lusitaniae ATCC 42720]
Length = 607
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 253/459 (55%), Gaps = 29/459 (6%)
Query: 169 AMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
A R V+P+ SL+PYQ NWTIK RV+ K ++RT+ NA+GEG +FNV DE +I+AT
Sbjct: 161 APERPVNPIESLSPYQNNWTIKGRVSYKSDVRTWSNAKGEGKLFNVNFLDE-SDEIRATA 219
Query: 229 FNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
FN+ A KFY+ Q GKVYY+++ ++ A +F + + YE++L++++E+ E +T+ +P
Sbjct: 220 FNDMADKFYNLLQEGKVYYVTKARIQQAKPKFSHLSHPYELSLDKDTEITECF-DTSDVP 278
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ NF ++++ T ++D+IGV+QNV+ I KS + +R+IT+ D++
Sbjct: 279 KINMNFTKLNQIQSAEKDT-IIDVIGVIQNVNDVFQITAKSTGKPFDRRNITIVDDSNFA 337
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAK 408
+ + LWN A + N ++A+K KV DF G SLS ++L +PD+PEA
Sbjct: 338 IDLGLWNATAVDF------NIPVGSVIAVKGAKVQDFGGRSLSLTPSGSLLSNPDIPEAY 391
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSI 467
+LK WY+S+G + S+ + GS + DR ++ + LG EKP +FSI
Sbjct: 392 QLKGWYDSKGSSENFQSLKTETGS-----STDSLKDRKTIA-LAEQLDLGTKEKPDYFSI 445
Query: 468 KAYISLIKPDQAMWYRACKT-----------CNKKVTDALGSGYWCEGCQKNDEECSLRY 516
KA I+ K D Y AC CN+KV + CE C E RY
Sbjct: 446 KATINYFKTDN-FCYPACNNEVNTNGRGPSPCNRKVIQESDGSWRCERCNLTFAEPHYRY 504
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS-QLGDDNSYQMKLKEVTWVPHL 575
I+ + D +G+ W + F+EE +++ +A EL LK + G+++ + + VT
Sbjct: 505 ILNCSIMDHTGQIWATFFDEEGKKLFNKTAGELMALKEMEEGENHEFMELVSSVTMKEFN 564
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
R+ Q+ +N R R V ++A VDF AES+ L +++
Sbjct: 565 FRLRARQESFNGNMRVRYNVVSIADVDFNAESQHLAKQL 603
>gi|402085897|gb|EJT80795.1| replication factor-A protein 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 628
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 324/643 (50%), Gaps = 53/643 (8%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN-----------RYMFNASDGKK 51
+ ++ AI I ++P +++ P V+Q L +KL N RY SD
Sbjct: 7 RQITRGAIRAIFNDPD-EANERFPVPVLQCLQIKLLENKQANPDAPFPERYRVVLSDMDN 65
Query: 52 RLKAILPSNLSSEVISGNIQNKG-LIRLLDYALNEIPTKSEKYLIVTKCEVVSP-----A 105
++ +L S ++ +I N+ KG ++R+ Y+ +++ K L++ EV+
Sbjct: 66 YIQCML-STQANHIIHDNLLYKGSIVRVRSYSASQL--KGRSILVLLDLEVIESLGIYEK 122
Query: 106 LEMEIKIEVKSDES------GIIFKPKQEDEVKKDGPGIVLKP--KQEMVAKSAAQILRD 157
L IE K + + G F +++ + KP + +M +++A
Sbjct: 123 LGEPTSIEAKGEPATSTTIGGTGFYGAKQEPEMEPEMEPEPKPQVRNQMPSRAAGSGAGG 182
Query: 158 QNGNMA-PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
G PA+ ++P+ SL+PYQ WTIK RV+SK ++RT+ GEG +F+V L
Sbjct: 183 GGGGGGGPASNPNAV--IYPIESLSPYQHKWTIKARVSSKSDIRTWHKPSGEGKLFSVNL 240
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENS 275
DE G +I+AT FN KFYD + +VYYIS +++A KQF + NDYEM + +
Sbjct: 241 LDETG-EIKATGFNNECEKFYDLLEENQVYYISSPCRVQMAKKQFTNLPNDYEMTFEDGT 299
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
++E+A +++ +PQ +FNF I EL + V VD+IGV++ + I K++ +
Sbjct: 300 QIEKAEDQSN-VPQVRFNFCNIQEL-QEVEKDATVDLIGVLKEAADITQIVSKNSGKNFD 357
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KR++T+ D++ +V +++W + A +A ++A K KVGDF G SLS L
Sbjct: 358 KRELTLVDDSGYSVRMTIWGKTALGF------DAKPESVIAFKGAKVGDFGGRSLSLLSS 411
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
T+ + PD+PEA +LK WY+S G+ S A+ + GSL GA + D + +
Sbjct: 412 GTMTLDPDIPEAHRLKGWYDSSGRDNSFATHNT--GSL---GAATGRKDELKTVSQVKDE 466
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECS 513
LG E +F++KA I I+ + Y AC TC+KKV + G + CE CQ +
Sbjct: 467 GLGMETDTYFNLKATIVFIRQEN-FCYPACMSATCSKKVVED-GENWRCEKCQISHPRPE 524
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RYIM V D +G+ W+S F++ I+G SADEL LK + D+ S+ +
Sbjct: 525 YRYIMSVNVNDHTGQLWVSCFDDVGRIIMGKSADELMALKEE--DEESFTRAFEAANCRR 582
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + +R R V + AP+D+ E+ L E I +
Sbjct: 583 LSFRCRAKMDTFGEVQRVRYQVMSAAPMDWKGEAARLTEMIKQ 625
>gi|428698228|pdb|4GOP|C Chain C, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|428698231|pdb|4GOP|Z Chain Z, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
gi|451928925|pdb|4GNX|C Chain C, Structure Of
gi|451928928|pdb|4GNX|Z Chain Z, Structure Of
Length = 444
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 258/451 (57%), Gaps = 23/451 (5%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ L+PYQ WTIK RVTSK ++R + N RGEG +F+V L D+ G +I+AT FN+A
Sbjct: 3 IYPIEGLSPYQNRWTIKARVTSKSDIRHWSNQRGEGKLFSVNLLDDSG-EIKATGFNDAV 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+FY Q VY IS+ + +A KQF +QN+YE+ ++E+EE + T +P+ K+
Sbjct: 62 DRFYPLLQENHVYLISKARVNIAKKQFSNLQNEYEITFENSTEIEECTDATD-VPEVKYE 120
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I+EL V + D+IG++ + I K++ V KR++T+ D+ R+V ++L
Sbjct: 121 FVRINEL-ESVEANQQCDVIGILDSYGELSEIVSKASQRPVQKRELTLVDQGNRSVKLTL 179
Query: 354 WNELA----TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
W + A TN G D+ P++A K +KVGDF G SLS ST+L++PD+ E+
Sbjct: 180 WGKTAETFPTNAG------VDEKPVLAFKGVKVGDFGGRSLSMFSSSTMLINPDITESHV 233
Query: 410 LKSWYESEGKGTSM---ASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFF 465
L+ WY+++G + G G G++ GA + ++R ++ + + +LG EKP +F
Sbjct: 234 LRGWYDNDGAHAQFQPYTNGGVGGGAMGGGGAGANMAERRTIVQV-KDENLGMSEKPDYF 292
Query: 466 SIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
+++A + IK + ++Y AC + CNKKV + + CE C ++ RYI+ V
Sbjct: 293 NVRATVVYIKQEN-LYYTACASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVA 351
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G+ W+S FNE+A ++IG SA EL++L+ + ++ + L ++
Sbjct: 352 DATGQMWLSGFNEDATQLIGMSAGELHKLREE--SESEFSAALHRAANRMYMFNCRAKMD 409
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+N+ R R T+ APVDFA L++ I
Sbjct: 410 TFNDTARVRYTISRAAPVDFAKAGMELVDAI 440
>gi|224122534|ref|XP_002330505.1| predicted protein [Populus trichocarpa]
gi|222872439|gb|EEF09570.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 229/402 (56%), Gaps = 25/402 (6%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N APA R+ P+ +LNPYQG W IK R+T+KG++R Y NARG+G VF+ +L D D
Sbjct: 110 NEAPA-------RIIPINALNPYQGRWAIKARITAKGDLRRYNNARGDGKVFSFDLLDSD 162
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+ T FN +FYD ++GKVY IS+G+L+ A K F ++ND+E+ L S V+
Sbjct: 163 GGEIRVTCFNAVVDRFYDVVEVGKVYLISKGSLKPAQKNFNHLKNDWEIFLEATSTVDLC 222
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
E IPQ +F+F PI E+ + D+IGVV +V+P++ I RK+ E +R +
Sbjct: 223 PEEDGSIPQQQFSFKPISEI-EIAENNSIFDVIGVVISVNPSVPILRKNGME-TQRRILN 280
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + TV ++LW + GQ+L + D PI+A+K+ KV DF G SL T+ + +
Sbjct: 281 LKDGSGWTVELTLWGDFCNKEGQKLQEMVDSGFFPILAVKAGKVSDFNGKSLGTISSTQL 340
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
++PD+PEA K W++ G+ + SI +A+ G ++ VS + LG
Sbjct: 341 FINPDIPEAHAAKDWFDRGGRDVASMSISK---DIAQGGPKNEVRKTVSQVKLE---GLG 394
Query: 459 -DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEE 511
+KP + +++A +S IK D Y AC + CNKKVT + S + C+ C + ++
Sbjct: 395 RSDKPDWATVRASVSFIKTD-TFCYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEFDD 453
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
C RY++ ++ D +G W + F E E I+G A EL LK
Sbjct: 454 CDYRYLLQVQIQDHTGLTWATAFQESGEEILGYPAKELYLLK 495
>gi|430814436|emb|CCJ28324.1| unnamed protein product [Pneumocystis jirovecii]
Length = 513
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 255/466 (54%), Gaps = 24/466 (5%)
Query: 154 ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
IL++Q + + ++P+ SL+PYQ WTIK RVTSK ++ + N +GEG +F+
Sbjct: 66 ILQNQKEEINNRISSVSSATIYPIESLSPYQNRWTIKARVTSKTEIKHWHNQKGEGKLFS 125
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
DE G +I+AT FN+ YD Q G+VY+IS+ + +A KQF VQN+YE+
Sbjct: 126 CVFMDESG-EIRATAFNDQVDMLYDVLQEGQVYFISKCRVNIAKKQFSNVQNEYELTFER 184
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
++EVE+ +++ +PQ KFNFV + +L V ++D+IG+++ V ++ I ++ +
Sbjct: 185 DTEVEKCPDQST-VPQAKFNFVFLKDLDN-VEKDSIIDVIGILKEVHESVEITSRTTQKF 242
Query: 334 V-PKRDITVADETKRTVTVSLWNELATNVGQELLD-NADKSPIVAIKSLKVGDFQGISLS 391
V KRDI + D + +V ++LW G+ LD N + +VA K LKV +F G SLS
Sbjct: 243 VYSKRDIFIVDSSNYSVRLTLW-------GKHALDFNIPQETVVAFKGLKVSEFNGRSLS 295
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI 451
L V+ +P + EA LK WY+ +GK S A+ S + ++ K +R ++ I
Sbjct: 296 LLNSGMVIANPQIEEAYSLKKWYDKQGKEESFATHQSIVTAIRK-------EERKTIAQI 348
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKND 509
E+P +FSIKA I K + A +Y AC T CNKKV + G+ CE C K+
Sbjct: 349 KDEQLGMAEQPDYFSIKATIVFFKQENA-FYPACPTAGCNKKVIEDNEGGWRCEKCDKSF 407
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
RYI+ V D +G+ W+S F++ IIG SAD++ +++ + ++ + E
Sbjct: 408 PAPQYRYILTISVNDHTGQIWLSCFDDVGRLIIGKSADDIVQMREE--NEQAALNIFHEA 465
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++ RV Q YN R R V + + +++A E K L E I+
Sbjct: 466 NCKSYVFRVRAKQDSYNGAVRVRYQVMSASFINWAHECKLLTEIIN 511
>gi|149637674|ref|XP_001507100.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit
[Ornithorhynchus anatinus]
Length = 619
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 321/644 (49%), Gaps = 51/644 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPE-IVVQVLDLKL--TGN---RYMFNASDGKKRLK 54
M +S AI+ I+ D PE ++QV++++ TGN RY SDG L
Sbjct: 1 MSGRLSEGAIAAIMQ------QGDSPEKPILQVINIRAISTGNGPNRYRLLMSDGLNTLS 54
Query: 55 A-ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKI- 112
+ +L + L+S V + + ++ + +N + + K +I+ EV+ A E+ KI
Sbjct: 55 SFMLATQLNSLVEEERLSTNCICQINRFIVNSL-KEGRKVIILMDLEVLKLAEEVGGKIG 113
Query: 113 -EVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMT 171
V +E Q+ GP + + ++ + + PA A T
Sbjct: 114 NPVPYNEGA-----GQQQTTPAPGPTAIPPASKPQQQNGSSGLGSAGTKSYGPAKSFAKT 168
Query: 172 -------------RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTD 218
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL D
Sbjct: 169 GSSNLLNTPGGSHSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVD 228
Query: 219 EDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
E G +I+AT FN+ A KF+ ++ KVYY S+G+L++ANKQF V+NDYEM N + V
Sbjct: 229 ESG-EIRATAFNDQADKFFPLIEVNKVYYFSKGSLKIANKQFTAVKNDYEMTFNNETSVV 287
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
+ +P +F+F I +L + LVDIIG+ ++ I KSNN V KR+
Sbjct: 288 -PCEDAHHLPTVQFDFTGIGDLENKSKDS-LVDIIGICKSYEEANKITVKSNNREVSKRN 345
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
I + D + + VT +LW + A E D + + P++AIK +V DF G SLS L STV
Sbjct: 346 IHLMDMSGKLVTATLWGDDA-----EKFDGS-RQPVMAIKGARVSDFGGRSLSVLSSSTV 399
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+++PD+PEA KL+ W++SEGKG SI G+ + + +L + +
Sbjct: 400 IMNPDIPEAFKLRGWFDSEGKGLDCISISDLRSGGGGGGSSTNWK---TLYEVKAENLGH 456
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRY 516
+K +FS + ++ + M Y+AC + CNKKV D Y CE C R
Sbjct: 457 GDKAEYFSCVGTVVYLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDCEFPNFKYRM 515
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
I+ A + D W++ F E AE I+G + L ELK + ++ +++ + + ++
Sbjct: 516 ILSANIADFQENQWVTCFQESAEAILGQNTMFLGELKEK--NEQAFEEVFQNANFRSYVF 573
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
R+ V + YN+E R + +V V PVD K L+ I + +
Sbjct: 574 RIRVKLETYNDESRIKASVMDVKPVDHREYGKRLIANIRRNAAQ 617
>gi|429855381|gb|ELA30339.1| replication factor-a protein 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 607
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 194/640 (30%), Positives = 312/640 (48%), Gaps = 72/640 (11%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG-------NRYMFNASDGKKRLKAIL 57
++ A+ I S+ +++S P V+Q L +K RY SD ++ +L
Sbjct: 7 ITKGALDAIFSD-GDNAASRFPVPVLQCLQIKPLAAQAGGGAERYRIVLSDVNNYVQCML 65
Query: 58 PSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV----SP-------AL 106
+ ++ V G + ++R+ Y N + K + LI+ EV+ +P A
Sbjct: 66 ATQVNHVVHDGKLVRNCIVRITQYQANAV--KGKNILIILGLEVIENLGTPDKIGEPQAF 123
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAA 166
E + + G F +++E K KP+Q + ++A N
Sbjct: 124 EAKAPPAANTTIGGQNFYGVKQEETKP-------KPQQSIPTRTAGGASGQHGSN----- 171
Query: 167 RLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
++P+ +L+PY WTIK RVT K ++RT+ GEG +F+V L DE G +I+A
Sbjct: 172 ------NIYPIEALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLDESG-EIKA 224
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETA 285
T FNE ++YD Q G VYYIS +++A KQF + NDYE+ ++ +E+A +++
Sbjct: 225 TGFNEQVDQYYDLLQEGSVYYISNPCKVQLAKKQFTNLPNDYELTFERDTLIEKAEDQSN 284
Query: 286 FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
+PQ +FNF I EL + V VD+IGV+++V+ I KS + KR++T+ D+T
Sbjct: 285 -VPQVRFNFCNIQEL-QEVEKDATVDVIGVLKDVAEVSQIVSKSTGKPYEKRELTLVDDT 342
Query: 346 KRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLP 405
+V V++W + AT + +VA K +KV DF G SLS L T+ + PD+
Sbjct: 343 NYSVRVTIWGKSATGF------DVKPESVVAFKGVKVSDFGGRSLSLLSSGTMSIDPDIT 396
Query: 406 EAKKLKSWYESEGKGTS------MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD 459
EA +LK WY+S G+ + MAS+G+ G K+ +S+ +LG
Sbjct: 397 EAHRLKGWYDSSGRNDAFNTHNNMASMGNATGR--KDQDKSIVQ--------VKEENLGM 446
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRY 516
E+ +F++KA I IK D Y AC + C+KKVTD +G G W CE C + RY
Sbjct: 447 EQQDYFNLKATIVYIKQDN-FAYPACMSEGCSKKVTD-MGDGTWRCEKCDISHPRPEYRY 504
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
IM VCD + + W+S F++ ++G SAD+L L+ D+ +E
Sbjct: 505 IMSVNVCDHTNQLWLSCFDDVGRIVMGMSADDLMALRED--DETKLAQAFEEANCRKLNF 562
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + +R R V + +DF +E L + I +
Sbjct: 563 RCRAKMDTFGESQRVRYQVMSATQIDFKSEGAKLADLIKQ 602
>gi|195108849|ref|XP_001999005.1| GI24276 [Drosophila mojavensis]
gi|193915599|gb|EDW14466.1| GI24276 [Drosophila mojavensis]
Length = 610
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 312/604 (51%), Gaps = 35/604 (5%)
Query: 24 DIPEIVVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+P+ V+Q+L +K R+ SDGK A+L S L+ G + ++R
Sbjct: 19 DVPQPVLQILGIKRINTNTDQERFRLLMSDGKYYNSYAMLASQLNEMQHKGLLNENTIVR 78
Query: 78 LLDYALNEIPTKS--EKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG 135
L Y + + + ++ LIVT+ V++ E++ KI E ++D V K
Sbjct: 79 LDKYMTSMVGKEGSGKRVLIVTEVTVLNSGDEVKTKI----GEPVTYENAAKQDTVPKAA 134
Query: 136 PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTS 195
P P ++ + + + N + HP+ SL+PYQ W IK RVTS
Sbjct: 135 PVTASAPVKKEQSYNNNNNNNNNNTMNSTMNGTLNASLTHPIASLSPYQNKWVIKARVTS 194
Query: 196 KGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRV 255
K +RT+ NARGEG +F+++L DE G +I+AT F E KFYD ++G VY+ S+ L+
Sbjct: 195 KTAIRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIEVGNVYFFSKCQLKP 253
Query: 256 ANKQFKTVQNDYEMNLNENSEVEEA-VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
ANKQ+ ++NDYEM + V+ ++ IP+ KF+ +PI ++ N E VD IG
Sbjct: 254 ANKQYSQLKNDYEMTFTGETMVQLCDEDDNGGIPEIKFDLIPISQVSNMEN-KEAVDTIG 312
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
+ + V + ++ N+ KR++T+ D + VT++LW + A N + P+
Sbjct: 313 ICKEVGELQTFTSRTTNKEFKKRELTLVDMSNAAVTLTLWGDEAVNF------DGHVQPV 366
Query: 375 VAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL 433
+ +K ++ +F G SLS G S + ++PD+PEA KL+ W+++ G G +++++ S
Sbjct: 367 ILVKGSRINEFNGGKSLSMGGGSILKINPDIPEAHKLRGWFDN-GGGDNISTMVS----- 420
Query: 434 AKNGARSMYSDRVSLTHI-TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNK 490
A+ G S +D V+L N GD KP +F KA + ++K + A +Y+AC CNK
Sbjct: 421 ARTGGGSFSTDWVTLKDARIRNLGSGD-KPDYFQCKAVVHIVKQENA-FYKACPQTDCNK 478
Query: 491 KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
KV D Y CE C R ++ + D + W++ F+E E+++ SA E+
Sbjct: 479 KVVDEGNGQYRCERCNAAFPNFKYRLLINMSIGDWTSNRWVTCFSEVGEQLLKHSAQEVG 538
Query: 551 ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
+ D + + ++ + ++ ++ + Y + R ++TV++++P+++ +K L
Sbjct: 539 DALEN--DPATAEKMFSDINFSSYIFKLRCKNEMYGDMTRNKLTVQSMSPINYREYNKHL 596
Query: 611 LEEI 614
++E+
Sbjct: 597 IKEL 600
>gi|403416914|emb|CCM03614.1| predicted protein [Fibroporia radiculosa]
Length = 609
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/580 (30%), Positives = 294/580 (50%), Gaps = 35/580 (6%)
Query: 38 TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVT 97
T +RY SDG+ L+A+L + L+ V I + + + N + K + LI+
Sbjct: 47 TVDRYRVIISDGEHFLQAMLATQLNHLVEDEKITKHSIATIEKFTCNLVQDK--RLLIIL 104
Query: 98 KCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRD 157
++V+ +S I P L K A ++ R
Sbjct: 105 SLQIVA-------------KDSSKIGNPTPIQSPSGPNAAGALPQKTAPAASTSTMTARP 151
Query: 158 QNGNMAPAARLAMTRR----VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+A TR V+P+ SL+PYQ +W IK RV+ K +++T+ N RGEG +F+
Sbjct: 152 PPAALAQQPPRQQTRNGRNTVYPIESLSPYQNHWMIKARVSQKSDVKTWSNQRGEGKLFS 211
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
V L DE G +I+ T FN A + YD+FQ GKVY++S+ + +A K+F VQN+YE+
Sbjct: 212 VTLMDETG-EIKGTGFNNAVDELYDKFQEGKVYFVSKARVNLAKKKFSNVQNEYELTFER 270
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
N+EVEE ++ +P ++NFV I +L + + D+IGVV++V I K+ N+
Sbjct: 271 NTEVEEC-HDVTNVPTVRYNFVDIGKLSE-ITKDSVCDVIGVVKDVGQLGEITSKTTNKT 328
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL 393
V KRD+T+ D + +V ++LW + A A+ P++A K +KVGDF G +LS
Sbjct: 329 VSKRDLTLVDRSGFSVRLTLWGKQAETF------VAEDQPVIAFKGVKVGDFGGRTLSMF 382
Query: 394 GRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS 453
ST+ V+PD+P+A L+ W+++ G + + S G + + ++ + + +
Sbjct: 383 SSSTMQVNPDIPDAHALRGWFDAAGVDQNYQAQSSSGGGGGGSYGQFERAEILPVNTVKE 442
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
+KP FF +A I +K + + Y AC T CNKKV + G+ CE C ++ E+
Sbjct: 443 REMGMSDKPDFFLCRATIMHLKTEN-IAYPACHTDGCNKKVIEG-HDGWRCERCDRSWEK 500
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGC-SADELNELKSQLGDDNSYQMKLKEVT 570
RYI+ D SG+AW+ FN+ + I SADE+ E+K + DD ++ +++
Sbjct: 501 PQYRYIVSLAAADYSGQAWLQGFNDAGQVIFDSKSADEVVEVKDR--DDVAFNKIVEQAM 558
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
+ Q+ +N+ R R +++ + PV + E +L
Sbjct: 559 GKTYNFVCRAKQETFNDSTRIRYSIQRILPVSYKEEGAYL 598
>gi|348683769|gb|EGZ23584.1| hypothetical protein PHYSODRAFT_556228 [Phytophthora sojae]
Length = 629
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/641 (28%), Positives = 312/641 (48%), Gaps = 46/641 (7%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLK-------LTGNRYMFNASDGKKRLKAIL 57
++P+A+S + + +PD E +Q++D K G+RY SDG + +L
Sbjct: 4 LTPNAVSMLYNKQTPDGF----EPWLQIIDTKKIKPASGTGGDRYRIVLSDGTSYISGML 59
Query: 58 PSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD 117
+ L+ + + +++ +++L DY NE+ + + LIV + PA + +
Sbjct: 60 ATQLAPMMENESLKTNYVLQLKDYLGNEV--QGRRILIVLSIGDIVPAFDRIGNPQSIEG 117
Query: 118 ESGIIFK-------------------PKQEDEVKKDGP-GIVLKPKQEMVAKSAAQILRD 157
G P Q + P +P ++ +
Sbjct: 118 SKGAPIPAAPAASAPPAASLGARPAAPVQSSFQQPSAPVNQYNQPPAAPLSYAPPAKPAP 177
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
N P R R+ + SLNPY G WTIK RVT++ ++ + NARG G +F+V+L
Sbjct: 178 SAYNRGPVVRQDPNVRLSDIQSLNPYAGGRWTIKARVTNRAPIKNWTNARGSGKLFSVDL 237
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D G +I+AT FN+ KFY+ + G V+Y + G +++AN++F +V NDYE+ +++S+
Sbjct: 238 LDARGGEIRATFFNDGVDKFYETLRPGGVFYFAGGKVKMANRRFSSVDNDYEVTFDQHSD 297
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+ A E I Q + F I E+ V VD+IG+V++V I K+ ++ K
Sbjct: 298 ISPAP-EDGQISQMNYTFKKIAEI-ESVPAEANVDVIGIVRDVGQVNEITSKAGKQLF-K 354
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
RDI++ D++ + ++WNE A L+ +VAIK +V D+ G S+ T+ S
Sbjct: 355 RDISLVDDSNAEIKCTMWNERAKEDCSSWLNQ-----VVAIKGCRVSDYNGRSIGTMMSS 409
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
+ V+P +PEA L +W+ S G + S G G+ +++R + I
Sbjct: 410 SFTVNPTIPEAGHLVNWF-SNGGNAAQTKSLSSGGGGFGGGSLGTFAERAVINDIKGKQL 468
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
+KP + ++K ++ IK D ++Y+AC C KKV + Y CE CQ + C RY
Sbjct: 469 GFGQKPDYITVKGTVNFIKHDTGVFYQACPKCQKKVVADVAQNYTCEKCQTSYSNCENRY 528
Query: 517 IMVARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
I+ + D +G W + FN++ + ++ G +ADE+ EL+ + Y+ KE + ++
Sbjct: 529 ILSVVMLDHTGSTWTTCFNDQGKVVMNGRTADEIGELRDT--NPTLYESTFKEALFKQYV 586
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ V + E R + V + PV+F ESK LL+ I++
Sbjct: 587 CRLRVKAENVQEELRVKAGVVNLEPVNFVQESKDLLQAIAQ 627
>gi|302421690|ref|XP_003008675.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
gi|261351821|gb|EEY14249.1| replication factor-A protein [Verticillium albo-atrum VaMs.102]
Length = 609
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 291/566 (51%), Gaps = 49/566 (8%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLK-LTG-----NRYMFNASDGKKRLKAILPSNLS 62
A+ I ++P + ++ P V+Q L +K L G +R+ SD +++++ + ++
Sbjct: 13 ALDAIFNDPE-NVATRFPVPVLQCLQIKPLAGQQGAADRFRIVLSDINNYVQSMMATQVN 71
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
+ G + L+R+ Y N + K + LI+ EV+ P L KI +
Sbjct: 72 HVIHDGQLVKNCLVRVTQYQPNSV--KGKNILIILGLEVI-PELGTPEKIG-----DPLA 123
Query: 123 FKPKQEDEVKKDG-PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR----VHPL 177
F+P E G G Q + + P+ +A T ++P+
Sbjct: 124 FEPLPEGAAPNAGNTGNAPIQGQNFYGAKKEEEKEKPRISQIPSRSVAGTSHGSSNIYPI 183
Query: 178 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L+PY WTIK RVT K ++RT+ GEG +F+V L DE G +I+AT FNE ++Y
Sbjct: 184 EALSPYAHKWTIKARVTQKSDIRTWHKPSGEGKLFSVNLLDESG-EIKATGFNEQCDQYY 242
Query: 238 DRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
D Q G VYYIS + +A KQF + NDYE+ ++ +E+A ++T +PQ ++NF
Sbjct: 243 DLLQEGSVYYISNPCKVGMAKKQFTNLPNDYELTFERDTVIEKAEDQTN-VPQVRYNFCN 301
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I EL + V VD++GV+++V I KS + KR++T+ D++ +V +++W +
Sbjct: 302 IQEL-QSVEKDATVDVVGVLKDVGEVSQIVSKSTGKPYEKRELTLVDDSNFSVRITIWGK 360
Query: 357 LATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
A D SP +VA K +KV DF G SLS L T+ V PD+P+A +LK WY
Sbjct: 361 SAQGF--------DASPESVVAFKGVKVSDFGGRSLSLLSSGTMSVDPDIPDAHRLKGWY 412
Query: 415 ESEGKGTSMA---SIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAY 470
+S G+ + A S+GSGLG A + D + + LG EK FF++KA
Sbjct: 413 DSSGRNDAFATHNSMGSGLG------AATGRPDEDKVVVQVKDEQLGMGEKQDFFNLKAT 466
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSG 527
I IK D Y AC+ CNKKV D + G W C+ C + + RYIM VCD +
Sbjct: 467 IVYIKQD-TFAYPACRNEGCNKKVVD-MNDGTWRCDKCDVSHDRPEYRYIMSVNVCDHTS 524
Query: 528 EAWISIFNEEAERIIGCSADELNELK 553
+ W+S F+E I+G SAD+L ELK
Sbjct: 525 QLWLSCFDEVGRSIMGMSADQLMELK 550
>gi|301115057|ref|XP_002999298.1| replication protein A 70 kDa DNA-binding subunit, putative
[Phytophthora infestans T30-4]
gi|262111392|gb|EEY69444.1| replication protein A 70 kDa DNA-binding subunit, putative
[Phytophthora infestans T30-4]
Length = 629
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 322/658 (48%), Gaps = 80/658 (12%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLK-------LTGNRYMFNASDGKKRLKAIL 57
++P+A+S + N PD E +Q++D K G+RY SDG L +L
Sbjct: 4 LTPNAVSMLYHNQVPDGF----EPWLQIIDTKKIKPASGTGGDRYRIVLSDGTSYLSGML 59
Query: 58 PSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD 117
+ L+ + + +++ +++L DY NE+ + + +IV K + P +
Sbjct: 60 ATQLAPMMENESLKTNYVLQLKDYLGNEV--QGRRIIIVLKVGNIVPHFD---------- 107
Query: 118 ESGIIFKPKQEDEVKKDGPGI-----------------VLKPKQEMVAKSAAQILRDQNG 160
I P+ D + GP + P Q + A + Q
Sbjct: 108 ---CIGSPQNIDGSR--GPSVPAASSASVPPAAALGARSAAPAQPSYQQPRAPTNQFQQP 162
Query: 161 NMAPAARLAMTR------------------RVHPLVSLNPYQGN-WTIKVRVTSKGNMRT 201
AP++ T+ R+ + SLNPY G WTIK RVT++ ++
Sbjct: 163 PAAPSSYTPPTKPAASTYNRGPVVRQDPNIRLSDIQSLNPYAGGRWTIKARVTTRSPIKN 222
Query: 202 YKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFK 261
+ N+RG G +F+V+L D +I+AT FN+ KFY+ + G ++Y + G +++ N++F
Sbjct: 223 WTNSRGSGKLFSVDLLDAKKGEIRATFFNDGVDKFYEMLRPGGIFYFAGGKVKMTNRRFS 282
Query: 262 TVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSP 321
+V NDYE+ + +S++ A E I Q ++ F I E+ V VDIIG+V++V+P
Sbjct: 283 SVDNDYEVTFDPHSDISPAP-EDGQISQMQYAFKKIAEI-ENVPADSNVDIIGIVRDVTP 340
Query: 322 TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLK 381
K+ ++ KRDI++ D++ + ++WNE A L+ ++AIK +
Sbjct: 341 VNEFTSKAGKQLF-KRDISLVDDSNVEIKCTMWNEQAQQECSNWLNQ-----VLAIKGCR 394
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
V +F G SLST G S+ V+P +PEA L +W+ + G T S+ S G G+
Sbjct: 395 VSEFNGRSLSTAGSSSFTVNPTIPEAGHLVTWFSNGGNATQTKSL-SSGGGGFGGGSLGS 453
Query: 442 YSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYW 501
+S+R + I S +KP + ++K ++ IK D ++Y+AC C KKV + Y
Sbjct: 454 FSERAVINDIKSKQLGFGQKPDYITVKGTVNFIKHDTGIYYQACPKCQKKVVADVAQNYT 513
Query: 502 CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC-SADELNELKSQLGDDN 560
CE CQ + C RYI+ + D +G W + FN++ + ++G +ADE+ EL+ D N
Sbjct: 514 CEKCQTSYPNCENRYILSVIMLDHTGSTWTTCFNDQGKVVMGGRTADEIGELR----DTN 569
Query: 561 S--YQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ KE + ++ R+ V + E R + +V + PV+F ESK LL+ I++
Sbjct: 570 PALFESIFKEALFKQYVCRLRVKAENVQEELRVKASVVNLEPVNFVQESKDLLQAIAQ 627
>gi|431891029|gb|ELK01908.1| Replication protein A 70 kDa DNA-binding subunit [Pteropus alecto]
Length = 599
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 249/449 (55%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 166 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 224
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V + +P +F
Sbjct: 225 VDKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSV-IPCEDGHHLPTVQF 283
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I +L + LVDIIG+ ++ I KSNN V KR+I + D + + V+ +
Sbjct: 284 DFTGIGDL-ESKSKDSLVDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVSAT 342
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++V+PD+PEA KL+
Sbjct: 343 LWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSILSSSTIIVNPDIPEAYKLRG 396
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + SG + + +++Y + + N GD K +FS A
Sbjct: 397 WFDSEGQALDGVSISDLKSGGIAGSNTNWKTLYEAK------SENLGQGD-KADYFSSVA 449
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + +M Y+AC T CNKKV D Y CE C + R I+ + D
Sbjct: 450 TVVYLRKENSM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQE 508
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G S + ELK + ++ +++ + + + ++ V + +N+
Sbjct: 509 NQWVTCFQESAEAILGQSTAYVGELKEK--NEQAFEEIFQNANFRSFIFKIRVKLETFND 566
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + V V PVDF + L+ I K
Sbjct: 567 ESRIKAVVMDVKPVDFREYGRRLIMNIRK 595
>gi|406860812|gb|EKD13869.1| replication factor-a protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 611
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 316/626 (50%), Gaps = 41/626 (6%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL-------TGNRYMFNASDGKKRLKA 55
K ++ A+ I ++P P V Q + +K +RY SD +++
Sbjct: 7 KHITRGALDAIFNDPIA-LQEQYPVPVCQCVQIKTLASSGEGAADRYRLVLSDVDNFVQS 65
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + + V G ++ ++RL Y N + K ++ LI+ EV+ EME KI
Sbjct: 66 MLATQANHVVHEGKLKKGSIVRLKQYQANAV--KGKRILIILDLEVIESLGEME-KIG-- 120
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQN--GNMAPAARLAMTRR 173
+ K+E +VK I K++A I +++ P++ A
Sbjct: 121 ---DPVALTVKEEPDVKPANTTIAGNGFYGNQPKASAPIKQERALPSRTGPSSS-ASHAT 176
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ L+PY WTIK RVT K +++T+ EG +F+V L DE G +I+AT FN+
Sbjct: 177 IYPIEGLSPYAHKWTIKARVTQKSDIKTWHKPSSEGKLFSVNLLDETG-EIKATGFNDQC 235
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
+ Y+ FQ G VYYIS +++A KQF + NDYE+ ++ VE+A ++ A +PQ ++
Sbjct: 236 DQLYELFQEGAVYYISSPCKVQLAKKQFSNLSNDYELTFERDTVVEKAEDQ-ADVPQIRY 294
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I EL + + ++DIIGV++ V+ I K+ + KR++T+ DE+ +V ++
Sbjct: 295 NFTGIGEL-QNIEKDSMIDIIGVLKEVADVNQIVSKTTQKPFDKRELTLVDESDFSVRLT 353
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W + A + +A I+A K KV DF G SLS L T+ ++PD+ EA KL+
Sbjct: 354 IWGKSAVSF------DAIPESIIAFKGAKVSDFGGRSLSLLSSGTMAINPDISEAHKLRG 407
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYI 471
WY+S+G+ + S + G+ GA SD + +LG E+P +FS+KA I
Sbjct: 408 WYDSQGRMNTFQSHQNMSGA----GAAGGRSDPLKTIAQVREENLGMSEQPDYFSVKATI 463
Query: 472 SLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGE 528
IK D Y AC CNKKV D +G G W CE C + + RYIM V D +G+
Sbjct: 464 VYIKQDN-FAYPACLNDGCNKKVID-MGDGSWQCEKCNVSHPKPEYRYIMSLNVNDYTGQ 521
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W++ F++ ++G S D+L EL+ D + + + ++ + + ++
Sbjct: 522 LWLNCFDDVGRLVMGHSGDQLMELREN--DTAAMEKAFETSNCTTYIFKCRAKMDNFQDQ 579
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEI 614
R R V +PV+F E+K L + I
Sbjct: 580 TRVRYQVMNASPVNFVQEAKKLADLI 605
>gi|357459135|ref|XP_003599848.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355488896|gb|AES70099.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 813
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/596 (29%), Positives = 305/596 (51%), Gaps = 76/596 (12%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
+Y SDG A + + L+ V +G ++ +++LLDY I + K +IV K E
Sbjct: 42 KYYLKLSDGVYSHSATIAAQLNDGVGTGRVKEGSIVKLLDYVCPTIVIR--KIIIVHKME 99
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNG 160
+ +S II PK + P+ MV
Sbjct: 100 TIVL-------------DSQIIGNPKS-----------FVDPELPMVE------------ 123
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P P+ +L+PY+G W IK RVTSKG++R Y + G F+ ++ D D
Sbjct: 124 NEEPI----------PIAALHPYKGKWAIKARVTSKGHLRHYNSPEGYLKAFSFDVLDSD 173
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISR-GTLRVANKQFKTVQNDYEMNLNENSEVEE 279
G ++Q T N+ FY+ ++GKVY IS+ G + V +K K ++ D+E+ LN NS VE
Sbjct: 174 GGEVQVTCLNDVIDSFYEVIEVGKVYLISKAGLIPVGSKDLKHLKIDWEIMLNSNSTVEL 233
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
+E IP KF+F I ++ + ++D+IGVV +V+ ++ + R++ EM KR +
Sbjct: 234 CPDEDGSIPMHKFSFRSISDI-ENIESNTILDVIGVVTSVNSSVLMSRENALEM-RKRIL 291
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRST 397
+ D + R+V ++LW EL GQEL D D P++A+K+ KV +F+G S++ + S
Sbjct: 292 NLKDNSGRSVELTLWGELCNREGQELKDIVDAGGFPVLAVKAGKVIEFRGKSINAIPISR 351
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
+ V+PD PEA+ L+ W++ +GK ++ +SI ++ G ++ R +++ I
Sbjct: 352 LFVNPDFPEAQSLRLWFDQDGKDSASSSISK---DISYGGPKNEL--RKTVSQIKDEGLG 406
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRAC-----------------KTCNKKVTDALGSGY 500
+KP + + +A IS +K D Y AC + C+KKVT + + +
Sbjct: 407 CTDKPDWITTRATISFMKTD-VFCYTACPVMIGDRRCNKKVTRSGERCSKKVTKTVNTRW 465
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDN 560
C+ C + + C RYI+ A++ D +G ++ FNE E I+G SA +L LK + DD
Sbjct: 466 KCDTCNQEFDVCEYRYILQAQIVDHTGLTCVTAFNEAGEDIMGYSAKDLYVLKYEQEDDE 525
Query: 561 SYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ +K + + + R+ + ++ E++ ++ V V+++AESK++L+ ISK
Sbjct: 526 RFRDIIKSILFNQFVFRLKIQKELCGEEQKVKIIVVKADKVNYSAESKYMLDLISK 581
>gi|410075269|ref|XP_003955217.1| hypothetical protein KAFR_0A06470 [Kazachstania africana CBS 2517]
gi|372461799|emb|CCF56082.1| hypothetical protein KAFR_0A06470 [Kazachstania africana CBS 2517]
Length = 618
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 174/591 (29%), Positives = 307/591 (51%), Gaps = 44/591 (7%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG +KA+L +S+ S +++ +IR + K + +I+ EVV +
Sbjct: 51 SDGTYHMKALLRDEAASKFSSMDLKRGDIIRSTSTEPVVVREKKKFVIIIHDFEVVQTGM 110
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAA------------QI 154
+M +D + I D + P +V+ + SAA
Sbjct: 111 DM------INDSTKFI------DSYFSEHPELVINDSESGEPPSAAAANYNNPVQPPVPQ 158
Query: 155 LRDQNGNMAPAARLAM-TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
++Q P++ + ++ + + L+PYQ WTIK RV+ KG ++ + N +G G +FN
Sbjct: 159 QQNQQSVFQPSSGTSQKSKPIFAIEQLSPYQNIWTIKARVSYKGEIKEWNNQKGSGKLFN 218
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
D G +I+AT FNE A K+ + Q GKVYYIS+ L+ A QF + + YE++L+
Sbjct: 219 ANFLDTSG-EIRATAFNEWAVKYSEILQEGKVYYISKARLQPAKPQFSNLSHPYELSLDR 277
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
++++EE +E+ +P+T FNF+ ++ + N + +D+IG++Q V P + ++ +
Sbjct: 278 DTQIEECFDESN-VPKTHFNFIKLNSIQNQENNS-TIDVIGIIQTVGPHFELTSRAGKKF 335
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL 393
+RDIT+ D++ ++ V LWN+ A + N + +VAIK ++V DF G +LS
Sbjct: 336 -DRRDITLVDDSNYSIPVGLWNQQAIDF------NLPEGSVVAIKGVRVSDFGGKTLSMG 388
Query: 394 GRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGS-GLGSLAKNG---ARSMYSDRVSLT 449
ST++ SPD+ EA LK WY+S G+ ++ S+ GS + NG A S R+++
Sbjct: 389 FTSTLVPSPDINEAYSLKGWYDSVGQNSNFTSLKQEADGSSSVNGGENATKFISQRITIA 448
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQK 507
+ E+ FFS+KA +S +K D Y AC CNKKV + + CE C
Sbjct: 449 RAQEDNLGRSERGDFFSVKAAVSFLKVDN-FAYPACSNEGCNKKVLEQSDGTWRCEKCDI 507
Query: 508 NDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLK 567
N+ RY++ + D + + W+++F+++AE+++G SA++L ELK D N + +
Sbjct: 508 NNPSPRWRYVLTISIMDETNQLWLTLFDDQAEQLLGTSANKLMELKET--DPNQFTKVTQ 565
Query: 568 EVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ + R+ + YN++ R R TV + ++ AE+ +L + +SK +
Sbjct: 566 AIQMNQYDFRIRAREDNYNDQTRIRYTVAFLHKINQKAEADYLADYLSKSL 616
>gi|346324124|gb|EGX93721.1| replication factor-A protein 1 [Cordyceps militaris CM01]
Length = 598
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 188/625 (30%), Positives = 296/625 (47%), Gaps = 45/625 (7%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT------GNRYMFNASDGKKRLKA 55
+ +S ++ I ++P ++ P +Q L +K G+RY SDGK ++
Sbjct: 4 ESALSKGSLDLIFNDPDK-ATKQFPIPTMQCLQVKQMAPSAQGGDRYRLVMSDGKHYVQT 62
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + + V + + R+ Y N + K + LI+ EV+
Sbjct: 63 MLATQANHVVHDEKLVRGCIARVKQYTPNNL--KGKNILIILDLEVI------------- 107
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
+ GI+ K + V+ + K + Q M + ++
Sbjct: 108 -ESYGILDKIGEPSAVESKAAETTIAGNDFYGVKKEEKPTPQQQ-TMPSRPAMHAGNNIY 165
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P+ WTIK RVTSK ++T+ A GEG +F+V L DE G +I+ T FN+
Sbjct: 166 PIEGLSPFSHKWTIKARVTSKSEIKTWHKATGEGKLFSVNLLDESG-EIKCTGFNDQCDA 224
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
FY+ Q G VYYIS + +A KQF + NDYE+ ++ +E+A ++T +PQ +FNF
Sbjct: 225 FYELLQEGSVYYISTPCRVNLAKKQFSNLPNDYELAFERDTVIEKAEDQTN-VPQVRFNF 283
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I EL + V VDIIGV++ I K KR++T+ D+T +V V++W
Sbjct: 284 STIQEL-QSVEKDNTVDIIGVLKEAGEISEIVSKKTGAPYQKRELTMVDDTGYSVRVTIW 342
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ A++ +A +VA K KV DF G SLS L T+ V PD+P+A +LK WY
Sbjct: 343 GKTASSF------DAQPESVVAFKGTKVSDFGGKSLSLLSSGTISVDPDIPDAHRLKGWY 396
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
+S G+ + + +LA GA + +D + +LG + +++IKA I +
Sbjct: 397 DSAGRNDNFTT----HQNLASVGAAAGRTDEIKTIAQVKEENLGVDDQAYYTIKATIVFV 452
Query: 475 KPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
K D Y AC + CNKKV D +G G W CE C + ++ RY+M V D + W+
Sbjct: 453 KQDN-FCYPACLSQGCNKKVQD-MGDGTWRCEKCNLSHDKPEYRYVMNFNVADHTSHQWL 510
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
S F+E I+G SADEL +LK D+ + + V R Y +R
Sbjct: 511 SCFDESGRAIVGMSADELMDLKEN--DEAKFMATFEAVNCKKLQFRCRARMDNYGEVQRV 568
Query: 592 RVTVRAVAPVDFAAESKFLLEEISK 616
R V + +DF +E L E I +
Sbjct: 569 RYQVMTASFLDFKSEGDKLAEMIKQ 593
>gi|167621451|ref|NP_956105.2| replication protein A 70 kDa DNA-binding subunit [Danio rerio]
gi|82185887|sp|Q6NY74.1|RFA1_DANRE RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|44890707|gb|AAH66711.1| Rpa1 protein [Danio rerio]
gi|49619041|gb|AAT68105.1| replication protein A 70kd subunit [Danio rerio]
Length = 601
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 300/600 (50%), Gaps = 64/600 (10%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+R+ SDG + + + S + + N + +L ++ + + +++
Sbjct: 39 SRFRVMMSDGLHTMSSFMLSTQLNPMAEQNQLATNCVCVLKRSVTNVLKDGRRVVVILDI 98
Query: 100 EVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQN 159
EV+ A +M G I P E + P P A+ L+ QN
Sbjct: 99 EVLKSADQM----------PGKIGDPTPYVEGQSKAPSTAPAP--------TARPLQPQN 140
Query: 160 GN----------------MAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYK 203
G+ MA + +V P+ SLNPYQ WTI+ RVT+K +RT+
Sbjct: 141 GSDGSTYRPSAQSFGKKPMAAPNTPGGSSKVVPIASLNPYQSKWTIRARVTNKSAIRTWS 200
Query: 204 NARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTV 263
N+RG+G +F++EL DE G +I+AT FN KF+ + GKV+YIS+GTL++ANKQF ++
Sbjct: 201 NSRGDGKLFSMELVDESG-EIRATGFNNEVDKFFSLIEQGKVFYISKGTLKIANKQFSSL 259
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
+NDYEM LN + + ++ +P + +FV I +L T ++D+IGV +N
Sbjct: 260 KNDYEMTLNGETSI-IPCEDSNDVPMLQCDFVSIADLESREKDT-ILDVIGVCKNAEDVA 317
Query: 324 SIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG 383
I K++ E V KR+I + D + R + +++W A E D + + PI+AIK ++
Sbjct: 318 RIMTKNSRE-VSKRNIQLIDMSGRVIQLTMWGSDA-----ETFDGSGQ-PILAIKGARLS 370
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASI-GSGLGSLAKNGAR 439
DF G SLSTL STV+++PD+PEA KL+ WY+ EG G SM + G G G
Sbjct: 371 DFGGRSLSTLYSSTVMINPDIPEAYKLRGWYDKEGHALDGQSMTELRGPGGGG------- 423
Query: 440 SMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDAL 496
++ +L + N LG +K +FS A I I+ + + Y+AC K CNKKV D
Sbjct: 424 --NTNWKTLAEV-KNEHLGHGDKADYFSCIATIVYIRKENCL-YQACPSKDCNKKVVDQQ 479
Query: 497 GSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQL 556
+ CE C K + R ++ A + D W++ F + AE ++G ++ L +LK
Sbjct: 480 NGMFRCEKCDKEFPDFKYRLMLSANIADFGDNQWVTCFQDTAETLLGQNSSYLGQLKDT- 538
Query: 557 GDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ ++ + + + R V + YN+E R +VTV PVD SK L+ I K
Sbjct: 539 -NEAAFDEVFQHANFNTFVFRNRVKLETYNDESRIKVTVVDAKPVDHREYSKRLIINIRK 597
>gi|242765554|ref|XP_002340998.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
stipitatus ATCC 10500]
gi|218724194|gb|EED23611.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
stipitatus ATCC 10500]
Length = 586
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 294/577 (50%), Gaps = 39/577 (6%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY SD ++ ++ + + V G ++ L+RL + N I K +K LI+ E
Sbjct: 32 RYRAVFSDISNYVQTMIATQANHLVKDGILRKGCLVRLKSFQSNAI--KGKKILIILDLE 89
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNG 160
V+ E E + K E+ K EDE +K P +V A +N
Sbjct: 90 VLQHLGEYEKIGDPKPLET------KAEDE-EKATPTMV--SGNGTYGAKAPTSYDSRNV 140
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
A ++ A ++P+ +++PY WTIK R TSK ++T+ + EG +F+V L D+
Sbjct: 141 RQASSSGHAT---IYPIEAISPYSHKWTIKARCTSKSAIKTWHRSNSEGKLFSVNLLDDS 197
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEE 279
G +I+AT FN+ YD FQ G VYYIS +++A KQF + NDYE+ ++ VE+
Sbjct: 198 G-EIRATGFNDQCDSLYDLFQEGSVYYISSPCRVQIAKKQFSNLNNDYELTFERDTIVEK 256
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
A ++ + +PQ +FNF I +L + V +D+IGV++ V PT I K+ N+ KRD+
Sbjct: 257 AEDQDS-VPQVRFNFTTIGDL-QSVEKDTTIDVIGVLKEVGPTSQITSKTTNKPYDKRDL 314
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL 399
T+ D T +V +++W LATN D +S +VA K +KV DF G SLS L T+
Sbjct: 315 TLVDNTGFSVRLTVWGNLATN-----FDTLPES-VVAFKGVKVSDFGGRSLSLLSSGTMT 368
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGS-GLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
V PD+ EA +LK WY+++G+ + S S G+ G Y ++ I
Sbjct: 369 VDPDIEEAHRLKGWYDAQGRSDTFTSHASMSDGTTPGGGKLDQYK---TIAQIREEQLGM 425
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLR 515
E FFS+KA I IK D Y AC + CNKKV++ L G W CE C K + R
Sbjct: 426 SEAADFFSLKATIIYIKQDNVS-YPACPSQGCNKKVSE-LDPGQWRCERCDKTYPKPEYR 483
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK--LKEVTWVP 573
YIM+ V D +G+ W++ F+E I+G +ADEL ++++ N Y+ +E
Sbjct: 484 YIMLINVSDHTGQLWLNCFDEVGRLIMGTTADELVNMEAE----NKYETSELFQEANCQT 539
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
R Y ++R R + + PV+++ E+ L
Sbjct: 540 WNFRCKAKMDHYGEQQRIRYQISSAKPVNYSDEAARL 576
>gi|353239748|emb|CCA71646.1| probable Replication factor-A protein 1 [Piriformospora indica DSM
11827]
Length = 611
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 295/586 (50%), Gaps = 41/586 (6%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+R+ SDG++ ++A+ + L+ +V G + +++L + +I K ++ LI+
Sbjct: 43 DRHRVIISDGEQFMQAMFATTLNEKVEDGTFRRNCVVKLTKWEPQDI--KGQRILILFSM 100
Query: 100 EVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIV-------LKPKQEMVAKSAA 152
E +S E +I V G P D + D L P + + A +A+
Sbjct: 101 EAISYP-EEKIGTPVNP---GKATAPGNSDSMAVDKSSNAPSTSSSDLVPSKPVPAPAAS 156
Query: 153 QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
R +GN AP + P+ LNPY WTIK RVT K + + N +GEG +F
Sbjct: 157 ---RGPSGNNAP---------IFPIEGLNPYHNKWTIKARVTMKSERKRWSNNKGEGQLF 204
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
+V L DE G +I+AT FN A YDRF+ GKVYYIS+G + +A K F + DYE+ ++
Sbjct: 205 SVNLMDETG-EIKATAFNAAVDALYDRFEEGKVYYISKGRVVIAKKAFSNLTCDYEITMD 263
Query: 273 ENSEVEEAVN-ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
+EVEE ++ E +PQ +++FV + +L VD+I VV +V SI K
Sbjct: 264 SKTEVEECMDAEADKVPQIQYSFVSLKDLEEKPKDAS-VDVIAVVHSVGELGSINTKQGK 322
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLS 391
+ KRD+ +AD + + +LW + A + +PIVA K LKV DF G SLS
Sbjct: 323 PL-SKRDLVLADRSGYSCRCTLWGKQAEQWSH------NDNPIVAFKGLKVSDFNGRSLS 375
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI 451
ST+ + D+PE L+ WY+ EG + + G G A+ + + +L +
Sbjct: 376 LNSSSTMHIDVDMPETNSLRGWYQKEGHKGNFNTHGGGGAGAARGSSGFKREEMKTLLEV 435
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKND 509
+ +KP FF+ +A I IK + + Y AC + CNKKV D G+G+ CE C K
Sbjct: 436 RESEMGSRDKPEFFNSRASIVTIKQEN-IAYPACMAEGCNKKVNDT-GNGWHCEKCDKTW 493
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
+ RY++ +V D + +AW+ FN+ A IIG +AD+L E+K D+ +Q + +
Sbjct: 494 PKPQYRYLLGIQVADHTAQAWLQAFNDVATEIIGMNADQLMEIKDN--DEAEFQKVIHKA 551
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ YN++ R R V P+DF AE++ L + +S
Sbjct: 552 QSKTYNFECRAKNDTYNDQTRVRYGVIKAYPLDFTAETRNLHKLLS 597
>gi|406602762|emb|CCH45720.1| Replication protein A 70 kDa DNA-binding subunit [Wickerhamomyces
ciferrii]
Length = 608
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 267/476 (56%), Gaps = 23/476 (4%)
Query: 142 PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRT 201
PKQE +S Q N N A ++ ++ + L+PYQ WTIK RV+ KG MRT
Sbjct: 148 PKQEQPKQSIPQPQSSTNTNKA-SSNQKKPSNIYAIDQLSPYQNIWTIKARVSFKGEMRT 206
Query: 202 YKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFK 261
+ N RGEG +FNV L DE +I+AT FN+ A KFY+ Q GK YY+S+ ++ + QF
Sbjct: 207 WSNQRGEGKLFNVNLLDETD-EIRATAFNDNAEKFYNLLQEGKAYYVSKARIQPSRPQFS 265
Query: 262 TVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSP 321
+++ YE+ L+ ++ +EE + +P+ F+FV ++++ + + ++D++GV++ V+P
Sbjct: 266 NLKHPYELQLDRDTVIEECFDADD-VPKLSFDFVKLNKI-QDLEADSIIDVVGVIKEVNP 323
Query: 322 TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLK 381
I K+ +RDITV D+++ ++V LWN+ A L + + ++AIK K
Sbjct: 324 HFQITSKA-GRAYDRRDITVVDDSQFAISVGLWNKTA------LEFDTPEGTVIAIKGAK 376
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
V DF G +LS T+ +PD PEA +K WY+++G+ + ++ + LG+ ++
Sbjct: 377 VSDFNGKTLSITPSGTITTNPDAPEAYAIKGWYDAQGRNENFQTLKTELGT-----RKTS 431
Query: 442 YSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGS 498
+R ++ + N LG EKP +F+IK+ ++ +K D Y AC + CN+KV +
Sbjct: 432 IEERKTIGDV-QNLELGLGEKPDYFTIKSSVNFLKTDN-FSYPACSSEGCNRKVIEQHDG 489
Query: 499 GYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD 558
+ CE C N RYI+ V D +G+ W+++F ++A+ ++G SA++L + K + D
Sbjct: 490 TWRCEKCDINHAVPLYRYILTISVVDPTGQLWVTLFEDQAKALLGYSANDLVKYKEE--D 547
Query: 559 DNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ + + ++ R+ Q YN + R R V +DF+ E+++L+++
Sbjct: 548 NSLFTSIVSKIQMNEFEFRIRARQDNYNGQVRIRYNAVNVNKIDFSNEAEYLVKKF 603
>gi|50406267|ref|XP_456619.1| DEHA2A06776p [Debaryomyces hansenii CBS767]
gi|49652283|emb|CAG84575.1| DEHA2A06776p [Debaryomyces hansenii CBS767]
Length = 620
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 184/635 (28%), Positives = 309/635 (48%), Gaps = 51/635 (8%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGN-----RYMFNASDGKKRL 53
+S A+ ILS S P I VQV ++K+ GN +Y +DG L
Sbjct: 7 LSSGALKGILSKTERQSFEGKP-ITVQVTNIKIIDQSLENGNGDSAVKYRVLLNDGAYSL 65
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIE 113
++ S + + +I + DY+L ++K++++ LE++ +
Sbjct: 66 HGLITSECIPYCEANGFKKTSVIIIKDYSL----VTTQKHIMIIN------NLEVKFQTS 115
Query: 114 VKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR 173
KS + I + + D + K ++ A+ Q A R
Sbjct: 116 NKSTNTLISCDSYYAEHPEDDYLELANKSQKLESAELNQAKAPQQQQQQPQKASTFQQRH 175
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V+ + L+PYQ W IK RV+ KG++R + NARGEG +FNV DE +I+AT FN+ A
Sbjct: 176 VNAIEQLSPYQNQWVIKARVSYKGDIRKWSNARGEGKLFNVNFLDE-SDEIRATAFNDLA 234
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
KFY + GKVYYIS+ ++ A QF + + YE+ L+ ++ VEE + T +P+ FN
Sbjct: 235 EKFYQELEEGKVYYISKARIQQAKPQFSHLSHPYELALDRDTNVEECFDTTD-VPKIHFN 293
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F ++++ ++D+IGV++ V+P I KS + +R+IT+ D++ +TV L
Sbjct: 294 FTKLNQI-ESCEPNSIIDVIGVLKEVNPVFQITAKSTGKPFDRRNITIVDDSNFAITVGL 352
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
WN A + D ++ S ++A K K+ DF G SL+ +++ +PD EA +LK W
Sbjct: 353 WNNTAVD-----FDTSEGS-VIAFKGCKIQDFAGRSLTLTHAGSMMANPDTAEAYQLKGW 406
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
++++G + ++ + S +++ ++R S+ EKP FF+IKA ++
Sbjct: 407 FDNQGVNENFKTLKNENSS-----NQNLINNRKSILQAQEENLGMSEKPDFFNIKATVNF 461
Query: 474 IKPDQAMWYRACK------------TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
K + Y AC TCN+KV + + CE C N E RYI+
Sbjct: 462 FKTEN-FCYPACNNSLQSSSQQPSTTCNRKVVEQPDGTWRCEKCDINFNEPHYRYILNCS 520
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNELKSQL--GDDNSYQMKLKEVTWVPHLLRVS 579
V D SG+ W+++F++EA ++ G +A EL L+ Q ++N +Q + ++T R+
Sbjct: 521 VMDSSGQLWMTLFDQEANKLFGKTAGELLTLREQQTNNENNVFQDLINDITMKEFNFRLK 580
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
Q YN R R + VDF AE + L E+
Sbjct: 581 ARQDSYNGVVRVRYQAMTINDVDFNAECEHLCSEL 615
>gi|393245622|gb|EJD53132.1| replication factor-a protein [Auricularia delicata TFB-10046 SS5]
Length = 617
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 251/434 (57%), Gaps = 16/434 (3%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V+P+ L+PYQ WTI+ RVT+K M+++ N +GEG +F+ D+ G +I+AT FN AA
Sbjct: 188 VYPIEGLSPYQNKWTIQARVTNKSEMKSWSNTKGEGKLFSCTFMDQSG-EIRATAFNTAA 246
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+ +++ + G VYY+++ + VA K+F + N+YE+ ++ N+E+EE V++ +P K+
Sbjct: 247 EELFEKLKEGNVYYVTKARVSVAKKKFSNLPNEYEITMDRNTEIEEIVDDDIDVPLQKYE 306
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV + L +N E+ D+IGVVQ V P K+ + KRD+T+ D+++ +V ++L
Sbjct: 307 FVSLKTLDT-LNKDEVCDVIGVVQEVGPVNKFLAKTTQRELTKRDLTIVDQSECSVRLTL 365
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W + A N + D P+VA K KVGDF G +LS L ++ + PDL E+ +L+ W
Sbjct: 366 WGKQAENWSR------DDKPVVAFKGCKVGDFGGRTLSLLSSGSLAIDPDLEESHRLRGW 419
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
++++GK + S SG G +A + + + L + + D+ P F +A +
Sbjct: 420 FDAQGKDATFHSFSSGGGGVASGPIDRL--EAMPLAAVREMEIVIDQ-PQLFVTRAAVVH 476
Query: 474 IKPDQAMWYRACKTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
+K D MWY AC+ CNKK+++A SG W CE C++N +E S RY++ V D + + W++
Sbjct: 477 VKADDKMWYAACQRCNKKISEA--SGKWRCEHCKQNWDEPSYRYMLSIAVADNTSQCWLT 534
Query: 533 IFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQR 592
FN+ I+G S ++L+++K Q D++ + +K+ + + Y + R +
Sbjct: 535 AFNDAGLTIVGQSGNDLHKIKGQ--DESGFNAIVKKAVGKYYTFSCRAKSETYQDLTRTK 592
Query: 593 VTVRAVAPVDFAAE 606
T+ + P+D+ E
Sbjct: 593 YTISRLQPLDWKQE 606
>gi|195390608|ref|XP_002053960.1| GJ23056 [Drosophila virilis]
gi|194152046|gb|EDW67480.1| GJ23056 [Drosophila virilis]
Length = 609
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 307/603 (50%), Gaps = 35/603 (5%)
Query: 24 DIPEIVVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + V+Q+L +K RY SDGK A+L S L+ G + ++R
Sbjct: 20 DVSQPVLQILGIKRINTNSDQERYRLLMSDGKYYNSYAMLASQLNEMQNRGLLNENTIVR 79
Query: 78 LLDYALNEIPTKS--EKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG 135
L Y + + + ++ LIVT+ V++ E++ KI D KQ+ K
Sbjct: 80 LDKYMTSMVGKEGSGKRVLIVTELTVLNSGDEVKSKI---GDPVTYENAAKQDTAPKPAA 136
Query: 136 PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTS 195
+ K+E + N + ++T HP+ SL+PYQ W IK RVTS
Sbjct: 137 VAASVPVKKEQSYNNNNNNNHTMNSTLNGTLNSSLT---HPISSLSPYQNKWVIKARVTS 193
Query: 196 KGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRV 255
K +RT+ NARGEG +F+++L DE G +I+AT F E KFYD ++ VY+ S+ L+
Sbjct: 194 KTAIRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIEVDNVYFFSKCQLKP 252
Query: 256 ANKQFKTVQNDYEMNLNENSEVEEAVNE-TAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
ANKQ+ ++NDYEM + V+ +E IP+ KF+ VPI ++ N E VD IG
Sbjct: 253 ANKQYSQLKNDYEMTFTNETMVQPCDDEDNGGIPEIKFDLVPISQVANMEN-KEAVDTIG 311
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
+ + V + ++ N+ KR++T+ D + VT++LW + A N + P+
Sbjct: 312 ICKEVGELQAFTSRTTNKEFKKRELTLVDMSNAAVTLTLWGDEAVNFDGHV------QPV 365
Query: 375 VAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL 433
+ +K ++ +F G SLS G S + ++PD+PEA KL+ W+++ G G +++++ S
Sbjct: 366 ILVKGSRINEFNGGKSLSMGGGSILKINPDIPEAHKLRGWFDN-GGGDNISNMVS----- 419
Query: 434 AKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKK 491
A+ G S +D V+L +KP +F KA + ++K + A +Y+AC CNKK
Sbjct: 420 ARTGGGSFSTDWVTLKDARLRNLGSGDKPDYFQCKAVVHIVKQENA-FYKACPQADCNKK 478
Query: 492 VTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNE 551
V D Y CE C R ++ + D + W++ F+E E+++ +A E+ E
Sbjct: 479 VVDEGNGQYRCERCNAAFPNFKYRLLINMSIGDWTSNRWVTCFSETGEQLLKHNAQEVGE 538
Query: 552 LKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLL 611
D + + ++ + ++ ++ + Y + R ++TV+++ P+++ +K L+
Sbjct: 539 ALEN--DPAAAEKMFADINFSSYIFKLRCKNEMYGDMTRNKLTVQSMTPINYKEYNKHLI 596
Query: 612 EEI 614
+E+
Sbjct: 597 KEL 599
>gi|449547245|gb|EMD38213.1| hypothetical protein CERSUDRAFT_113363 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 237/440 (53%), Gaps = 19/440 (4%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ SL+PY NWTIK VT K +R + N RGEG +F+V D+ G +I+AT FN+AA
Sbjct: 185 IYPIESLSPYMNNWTIKALVTQKSGIRKWSNDRGEGKLFSVVFVDDTG-EIKATAFNQAA 243
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+ R Q GKVY +S+G + +A K+F V N+YE+ L +EVEE + +P K+N
Sbjct: 244 DDLHARLQEGKVYLVSKGRVGLAKKKFNNVVNEYELTLERTTEVEEC-RDVVNVPTVKYN 302
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L + V + DII V++ P I KS+N + KR++T+ D + +V ++L
Sbjct: 303 FVDIAGL-QNVEKDAICDIIAVIKETGPMGEITTKSSNRTITKRELTLVDRSGYSVRLTL 361
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W A E + D+ P+VA K +KVGDFQG SLS S++ ++PD+P+A L+ W
Sbjct: 362 WGAQA-----EQWNAGDEHPVVAFKGVKVGDFQGRSLSMSMSSSMQLNPDIPDAHLLRGW 416
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP---VFFSIKAY 470
Y+ G S S + GS G + R + + G +P FS +A
Sbjct: 417 YDGGGAEQSYQSHANNSGS----GGSGLAFKREEVLPVQEVKEQGFGEPDKGEIFSSRAT 472
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
I ++P+ + Y AC TC+KKV +A G+ CE C + E+ RYI+ A V D SG+AW
Sbjct: 473 IMHVRPEN-LTYPACPTCHKKVIEA-HDGWRCEKCNMSHEKPQYRYIITAAVADWSGQAW 530
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
FNE + I G S DEL E+K + D Q L V + Q YN+ R
Sbjct: 531 FQGFNEMGQVIFGMSGDELMEIKER--SDTEMQNVLSRVIGSTYNFVCRAKQDNYNDNVR 588
Query: 591 QRVTVRAVAPVDFAAESKFL 610
R V + P ++A E ++
Sbjct: 589 TRYGVSRIEPPNYAEEGNYI 608
>gi|149724785|ref|XP_001504393.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Equus
caballus]
Length = 603
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 246/449 (54%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 170 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 228
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 229 ADKFFPLLDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 287
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I EL + LVDIIG+ ++ I KSNN V KR+I + D + + VT +
Sbjct: 288 DFTGIGELENKPKDS-LVDIIGICKSYEDATKITVKSNNREVSKRNIYLMDTSGKVVTTT 346
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+++PD+ EA KL+
Sbjct: 347 LWGEDADRF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDISEAYKLRG 400
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + G + +++Y + + N GD K +FS A
Sbjct: 401 WFDSEGQALDGVSISDLKGGGTGGSNTNWKTLYEVK------SENLGQGD-KADYFSSVA 453
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC + CNKKV D Y CE C R I+ + D
Sbjct: 454 TVVYLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQE 512
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + +N+
Sbjct: 513 NQWVTCFQESAEAILGQNTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETFND 570
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I K
Sbjct: 571 ESRIKATVMDVKPVDYREYGRRLIMNIRK 599
>gi|440637381|gb|ELR07300.1| hypothetical protein GMDG_02480 [Geomyces destructans 20631-21]
Length = 608
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 204/628 (32%), Positives = 321/628 (51%), Gaps = 52/628 (8%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLK---LTGN---RYMFNASDGKKRLKAILP 58
++P + I ++P ++D P V Q + +K GN RY SD K ++++L
Sbjct: 10 ITPGVLDAIFNDPE-RRATDFPVPVCQCVQIKPLASQGNGAERYRVVLSDTKNFVQSMLA 68
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
+ + + ++ L+RL + N + K ++ L++ +V++ E + KI D
Sbjct: 69 TGANHFIHDQKLKKGSLVRLKQFQANAL--KGKRILVIMDIDVLAEFGEPD-KI---GDP 122
Query: 119 SGIIFKPKQEDEVKKDGPGIVL-------KPKQEMVAKSAAQILRDQNGNMAPAARLAMT 171
+ K K E+E K PG V KP Q+ A Q L + G + A +
Sbjct: 123 QAL--KVKDEEEDVKPAPGAVSGAGFYGNKPAQQ----PAQQSLPSRTGPSSSAGQ---- 172
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
++P+ +L+PY WTIK RV++K +RT+ GEG +F+V L DE G +I+AT FNE
Sbjct: 173 GNIYPIETLSPYAHKWTIKARVSNKSEIRTWHKQSGEGKLFSVNLLDESG-EIKATGFNE 231
Query: 232 AARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ YD FQ G VYYIS +++A KQF + NDYE+ + ++VE+A ++ +PQ
Sbjct: 232 QCDQLYDLFQEGSVYYISSPCRVQLAKKQFTNLPNDYELTFDRETKVEKAEDQEN-VPQV 290
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+FNF I L + V +D+IGV++ V+ I KS ++ KR++T+ D++ +V
Sbjct: 291 RFNFTDIASL-QTVEKDTTIDVIGVLKEVADVTQIVSKSTSKPYDKRELTLVDDSDFSVR 349
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
+++W + A + +A IVA K KV DF G SLS L ++ V PD+ EA KL
Sbjct: 350 LTIWGKTAVSF------DAQPESIVAFKGAKVSDFGGRSLSLLSSGSMTVDPDIQEAHKL 403
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKA 469
+ WY++ G+ + AS +A GA D V SLG E +FS KA
Sbjct: 404 RGWYDTHGRSNTFAS----HSGMASAGAAGGRQDPVMTVAKVYEDSLGMSESTDYFSTKA 459
Query: 470 YISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGS 526
I IK + Y AC + CNKKVTD +G G W CE C + RYIM V D +
Sbjct: 460 TIVYIK-QENFAYPACLSEGCNKKVTD-MGDGTWRCEKCDITHPKPEYRYIMSLNVNDHT 517
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G+ W+S F++ I+G SAD+L LK +D + +E L + +
Sbjct: 518 GQLWLSCFDDVGRLIMGMSADQLMALKD--SEDPAAGRAFEEANCKTMLFKCRAKMDSFQ 575
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+++R R V A +PV+++ E++ L E I
Sbjct: 576 DQQRVRYQVTAASPVNYSQEAQKLAELI 603
>gi|349605285|gb|AEQ00575.1| Replication protein A 70 kDa DNA-binding subunit-like protein,
partial [Equus caballus]
Length = 481
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 246/449 (54%), Gaps = 24/449 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 48 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQ 106
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ + KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 107 ADKFFPLLDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 165
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F I EL + LVDIIG+ ++ I KSNN V KR+I + D + + VT +
Sbjct: 166 DFTGIGELENKPKDS-LVDIIGICKSYEDATKITVKSNNREVSKRNIYLMDTSGKVVTTT 224
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L STV+++PD+ EA KL+
Sbjct: 225 LWGEDADRF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDISEAYKLRG 278
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W++SEG+ G S++ + G + +++Y + + N GD K +FS A
Sbjct: 279 WFDSEGQALDGVSISDLKGGGTGGSNTNWKTLYEVK------SENLGQGD-KADYFSSVA 331
Query: 470 YISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ ++ + M Y+AC + CNKKV D Y CE C R I+ + D
Sbjct: 332 TVVYLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQE 390
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F E AE I+G + L ELK + ++ +++ + + R+ V + +N+
Sbjct: 391 NQWVTCFQESAEAILGQNTAYLGELKEK--NEQAFEEVFQNANFRSFTFRIRVKLETFND 448
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + TV V PVD+ + L+ I K
Sbjct: 449 ESRIKATVMDVKPVDYREYGRRLIMNIRK 477
>gi|358053972|dbj|GAA99937.1| hypothetical protein E5Q_06640 [Mixia osmundae IAM 14324]
Length = 605
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 178/595 (29%), Positives = 300/595 (50%), Gaps = 63/595 (10%)
Query: 39 GNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTK 98
+RY SD ++A+L + L+ + G I+ ++RL YA+N++ +S +
Sbjct: 48 ADRYRLILSDSAHFIQAMLATQLNHLIGDGQIEKHAVVRLDQYAINKVQNRS-----IVI 102
Query: 99 CEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKK---DGPGIVLKPKQEMV-------- 147
C + IEV E+ I P ++++K P V P E+
Sbjct: 103 C----------LGIEVLGKETDKIGDPSSVEKLEKIESQAPKGV-NPFNEISNVSRASAP 151
Query: 148 AKSA--AQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNA 205
AKSA ++ R NG P ++P+ L+PYQ WTIK RVT K ++R Y NA
Sbjct: 152 AKSAIASKNARATNGPNTP---------IYPIEGLSPYQNKWTIKARVTLKSDIRHYTNA 202
Query: 206 RGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA-NKQFKTVQ 264
+G+G VF+V L DE G +I+AT FN+A ++ F+ GKVYY+S+ + ++ NKQ+
Sbjct: 203 KGDGKVFSVNLLDESG-EIRATGFNDAVDNLFNVFEEGKVYYVSKARVNISKNKQYNPTN 261
Query: 265 NDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMS 324
N+YE+ +++V E +T +PQ K+NFV + +L ++D++GVV+ V S
Sbjct: 262 NEYEIMFERDTQV-ELCTDTTDLPQVKYNFVNLSDLTTQ-EANAMIDVLGVVKEVGELSS 319
Query: 325 IRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD 384
I K+ ++ +PKR+I + D+++ +V ++LW A +A PI+A K +KVGD
Sbjct: 320 IVSKATSKQIPKREIVLIDQSEFSVRMTLWGRQAEQF------SAPDQPIIAFKGVKVGD 373
Query: 385 FQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG---TSMASIGSGLGSLAKNGARSM 441
F G SLS + ST+ V PD+ A L W ++ G+ + S G G G + A+
Sbjct: 374 FGGRSLSMVSSSTMAVDPDIQPAHSLSGWMKAVGETKTFQTFKSTGGGAGGFKEEEAK-- 431
Query: 442 YSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSG 499
++ I + P F ++A I +K D ++ Y AC + CNKKVT
Sbjct: 432 -----TIAQIKEEGLGMQDTPDNFFLRATIVYVKKD-SLSYPACPKEGCNKKVTPTSEGS 485
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
+ CE C ++ RY+M V D +G+ W+S F++ I+ SAD++ L+ + D+
Sbjct: 486 FRCEKCSEDFPAPQHRYVMSLSVLDHTGQLWLSAFDDAGRLILDHSADDIERLRDE--DE 543
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ + + + + + + R R + PVD+ A S +L+++I
Sbjct: 544 QAFVGAIWRGSGKAYNFACRARTETFQDTSRVRYQINRATPVDYVAASAWLVKQI 598
>gi|345494357|ref|XP_003427279.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Nasonia vitripennis]
Length = 584
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/578 (29%), Positives = 301/578 (52%), Gaps = 39/578 (6%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDG-KKRLKAILPSNLSSEVISGNIQNKGLIR 77
++ E V Q+L K +G+RY SDG +L + L+ + + + +++
Sbjct: 17 EVDEPVFQILGHKKLASSASGDRYRLLVSDGILSNSFTMLATQLNDLITNNTLSEHSIVK 76
Query: 78 LLDYALNEIPTKSEK--YLIVTKCEVVSPALEM-EIKIEVKSDESGIIFKPKQEDEVKKD 134
+ YA++ + + +++ EV+ P E+ + V ++ + + E+
Sbjct: 77 IKRYAISTVNNGGTQRNVMVILSIEVLVPGHEIGRVLGNVNANNT------RTEEAAPAA 130
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH--PLVSLNPYQGNWTIKVR 192
L+ + AK A++I + N + L ++ P+ +L+PYQ W IKVR
Sbjct: 131 TLATALRSNNQQNAKPASRI-NNPAVNHLNESLLNGGNGINATPIAALSPYQNRWVIKVR 189
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
VT+K +RT+ N+RGEG +F+++L DE G +I+ T F + KFYD ++GKVYYISR
Sbjct: 190 VTNKSPIRTWSNSRGEGKLFSIDLLDESG-EIRCTAFRDQCDKFYDMIEIGKVYYISRCQ 248
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
L+ ANKQF ++NDYEM L +SE+ E IP +F+FVPI+ + + EL+D+
Sbjct: 249 LKPANKQFNNLKNDYEMTLTSDSEIAICNEENEGIPTLQFDFVPINTV-EAKSKDELIDV 307
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD-NADK 371
+G+V+ S ++ ++ + KRDI + DE +TV+LW G + +D +
Sbjct: 308 LGIVKTCSDIQTLTARTTGRELKKRDIGIVDENNDLITVTLW-------GTQAIDFDGST 360
Query: 372 SPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+P++AIK K+G+F G +LS + S + V PD+P+A +L+ W+++ G S+
Sbjct: 361 NPVIAIKGAKIGEFNGGKNLSLVASSMLQVDPDIPQAHRLRGWFKTVGATEESRSL---- 416
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--C 488
S G ++ ++ + N + P F KA ++LI+ + A+ Y++C + C
Sbjct: 417 -SRTLGGGGNLNGPWLTFKEVEDNRFGHQDMPNMFIAKATVNLIRAENAL-YKSCPSEGC 474
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
KKV D Y CE C ++ + R + + D +G W + FNEEAE ++ SA E
Sbjct: 475 KKKVIDQSNGMYKCEKCSRDYPNFTYRLLASTNLVDWTGNQWATAFNEEAEVLLSASAQE 534
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
L ELK + GD +Y K+ + ++ ++ + + +N
Sbjct: 535 LGELKEKDGD--TYMEKIGAAAFKSYIFKLRIRLENFN 570
>gi|340923669|gb|EGS18572.1| putative DNA replication protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 617
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 315/638 (49%), Gaps = 51/638 (7%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLK-LTGN-----------RYMFNASDGK 50
+ ++ AI I +P + P V+Q L +K L+G RY SD +
Sbjct: 4 QAITQGAIEAIFFDPDR-AQRQFPVPVLQCLQIKTLSGQQTGAQQPGGAERYRIVLSDMR 62
Query: 51 KRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEI 110
++ +L + + V G++Q ++RL Y + K + L+V EV++ +L
Sbjct: 63 NYVQCMLATQANHVVHDGSLQRNCIVRLKQYQAQSV--KGKWVLVVLDLEVIT-SLGTPD 119
Query: 111 KIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAM 170
KI + G+ + E + G KQE +S +Q+ R + +
Sbjct: 120 KI---GEPKGLDTR-DTEPQANAMGGTSFYGAKQE-PQESKSQVQRQISTGSTRSNGSGG 174
Query: 171 TRR------VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
++P+ +L+PY WTIKVRV SK +RT+ A GEG +FNV L DE G I
Sbjct: 175 GGMSHNGSVIYPVEALSPYNSKWTIKVRVRSKPPIRTWHKASGEGKLFNVILFDETG-DI 233
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
+ T FN+A ++YD Q G+VYYIS +R+A ++ +DYEM ++ ++ +E+A ++
Sbjct: 234 RMTGFNDAVDRWYDVLQEGQVYYISGCKVRMAQRKLDARASDYEMVIDRDTVIEKAEDDG 293
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
+ +PQ + N I +L + V +VD++GV++ V P SI K+ + KRDIT+ D+
Sbjct: 294 S-VPQVRLNLCNIQDL-QNVEANTIVDVLGVIKEVGPVDSIISKTTQKPFDKRDITLVDD 351
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
T +V ++LW + AT+ +A + IVA K KV DF G +LS L + PD+
Sbjct: 352 TGYSVRLTLWGKQATSF------DATEESIVAFKDCKVSDFNGRNLSLLSSGSWSADPDI 405
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPV 463
PEA +LK WY+S G+ S + S++ GA + D + +LG E+P
Sbjct: 406 PEAHRLKGWYDSMGRTQSFLT----HKSMSSVGAATGRKDDFKTVRQVKDENLGMGEQPD 461
Query: 464 FFSIKAYISLIKPDQAMWYRACKT----CNKKVTDALGSGYW-CEGCQKNDEECSLRYIM 518
+FS+K I IK D Y +C T CNKKVTD +G G W CE C + RY +
Sbjct: 462 YFSLKGTIVAIKQDN-FCYPSCLTDNPPCNKKVTD-MGDGTWRCEKCDVTHDRARYRYNL 519
Query: 519 VARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRV 578
V D +G W++ F++ A ++G +ADEL L+ GD + +E + RV
Sbjct: 520 GVMVSDHTGHLWVTCFDDIANVVMGRTADELVSLQ---GDKAALDAIFEEASCQKLTFRV 576
Query: 579 SVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + R R + P+DF +E L E I +
Sbjct: 577 RAKMDTFGDMPRVRYQAMSATPIDFKSEGHKLAELIRQ 614
>gi|449265984|gb|EMC77111.1| Replication protein A 70 kDa DNA-binding subunit, partial [Columba
livia]
Length = 607
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 268/503 (53%), Gaps = 38/503 (7%)
Query: 124 KPKQED-EVKKDGPGI--VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSL 180
KP+Q++ V GP P + SA +L+ G+ +V P+ SL
Sbjct: 128 KPQQQNGNVSVAGPAAPKYHAPSNQFGKASAPNLLKTPGGSQV---------KVVPIASL 178
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
NPYQ WTI RVT KG +RT+ N+RGEG +F++EL DE G +I+AT FN+ A KF+
Sbjct: 179 NPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNDQADKFFPLI 237
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+L KVYY S+GTL+ ANKQ+ ++NDYE+ + V ++ +P +F+FV I +L
Sbjct: 238 ELNKVYYFSKGTLKSANKQYTAIKNDYEITFTSETSV-VPCDDAQHLPSVQFDFVSISDL 296
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
+ +VD+IG+ ++ I K+NN V KR++ + D + + VT +LW A
Sbjct: 297 ENTPKDS-IVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGNEA-- 353
Query: 361 VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
E D + + P++AIK +V DF G SLS L STV+++PD PEA KL+ WYE + +G
Sbjct: 354 ---EQFDGS-RQPVIAIKGARVSDFGGRSLSVLSSSTVIINPDSPEAFKLRGWYEFDSEG 409
Query: 421 -----TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
TS++ + GL + A ++++ + N GD K +FS + ++
Sbjct: 410 QLLECTSISDVRGGLAAGANTNWKTLFEAK------AENLGQGD-KADYFSCVGTVVHLR 462
Query: 476 PDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ M Y+AC + CNKKV D Y CE C + R +++ + D W++
Sbjct: 463 KENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTC 521
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
F + AE I+G A L ELK + ++ +++ + + + R+ V + YN+E R +
Sbjct: 522 FQDTAEFILGQKAAFLGELKEK--NEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKA 579
Query: 594 TVRAVAPVDFAAESKFLLEEISK 616
T V PV++ SK L+ I +
Sbjct: 580 TAVDVKPVNYREYSKRLIASIRR 602
>gi|47221831|emb|CAG08885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 631
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 245/442 (55%), Gaps = 21/442 (4%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ LNPY WTI+ RV +K ++R + N+RGEG +F+ + DE G +I+ T+FN KF
Sbjct: 207 IAQLNPYLSKWTIRARVMNKASIRNWSNSRGEGKLFSFVVVDESG-EIKITVFNNEVDKF 265
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
+ + GKVYYIS+ TL+VANKQ+ T+ +DYEM L+ +S + + IP + +FVP
Sbjct: 266 FPLVEQGKVYYISKATLKVANKQYNTLNHDYEMTLHAHSSIVPCADGQD-IPAAQCDFVP 324
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I EL + ++D+IGV + V I +++ E V KR + + D T + V +LW E
Sbjct: 325 IAELENR-DKDAIIDVIGVCKTVEDVSRITTRTSRE-VSKRTLHLIDTTGKMVAATLWGE 382
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A E D +++ P+VAIK ++ DF G SLSTL STV+V+PD+PEA +L++WY+
Sbjct: 383 EA-----EKFDGSEQ-PVVAIKGARLSDFGGRSLSTLFSSTVMVNPDIPEAIRLRAWYDH 436
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP 476
G S+ +GAR + +L+ + N + G + +FS A + I+
Sbjct: 437 GGYAQDSQSLSETKSR--GSGARMNWK---TLSEV-KNENFGTRRKDYFSCVATLLYIRK 490
Query: 477 DQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
D + YRAC + CNKKV D + CE C ++ R ++ A + D W++ F
Sbjct: 491 DSCL-YRACPSSDCNKKVIDQFNGWFRCEKCNQDFPNFEYRLLLSANLADFGDNQWVTCF 549
Query: 535 NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
E AE ++G SA+ L L+ D+ ++ ++ + ++ ++ V + YN+E R + T
Sbjct: 550 QETAEVLLGHSAETLGRLRDT--DEAAFDAVFQKANFTSYIFKIRVKLETYNDESRVKAT 607
Query: 595 VRAVAPVDFAAESKFLLEEISK 616
V V P+D S+ LL I K
Sbjct: 608 VMEVQPLDHREYSRRLLGNIRK 629
>gi|50302901|ref|XP_451388.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640519|emb|CAH02976.1| KLLA0A08844p [Kluyveromyces lactis]
Length = 621
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 251/451 (55%), Gaps = 17/451 (3%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+R + + ++PYQ NWTIK RV+ KG+++ ++N RGEG + NV L D G +I+AT FN
Sbjct: 185 SRPIFAIEQISPYQNNWTIKARVSFKGDLKKWQNNRGEGHILNVNLLDSSG-EIRATAFN 243
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF-IPQ 289
+ A KF + Q GK Y++S+ ++ A QF +++ YE++L + VEE +NE A +P+
Sbjct: 244 DNAIKFNEILQEGKAYFVSKARVQPAKPQFSNLKHPYELSLERDCVVEECMNEDANDVPE 303
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
FNF+ ++++ V +D++G++++V P + KS + +RD+ + D++ +
Sbjct: 304 MHFNFIKLNDVNN-VEKNTAIDVVGILKSVGPHFELAAKSGKKF-DRRDVEIVDDSGACI 361
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
++ LW E Q + N + +VA+K ++V DF G SLS S++ +PD+ EA
Sbjct: 362 SLGLWGE------QAIKFNLPEGSVVALKGVRVTDFNGKSLSMGNTSSLFANPDIQEAYT 415
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
LK WY++ T+ ++ + G A +DR ++ + EK +FS+KA
Sbjct: 416 LKGWYDANASNTTFKALKTESGGGAD--TSKFIADRTTIARAIESNLGRSEKGDYFSVKA 473
Query: 470 YISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+S +K D Y AC + C KKV + CE C N RY++ + D +G
Sbjct: 474 AVSFLKVDN-FAYPACLNEGCQKKVIMQSDGTWRCEKCDMNHPHPKYRYMLTISIMDQTG 532
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
+ W+++FN++AE+++G SA+EL ELK ++ ++ ++V + R+ + YNN
Sbjct: 533 QIWLTLFNDQAEQLVGVSANELTELKEN--NNQAFVALTQKVQMNEYDFRIRAREDNYNN 590
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
E R R TV + + + AE+ FL E+ K +
Sbjct: 591 ETRIRYTVANLHDLRWKAEADFLAAELLKAL 621
>gi|116179976|ref|XP_001219837.1| hypothetical protein CHGG_00616 [Chaetomium globosum CBS 148.51]
gi|88184913|gb|EAQ92381.1| hypothetical protein CHGG_00616 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 277/529 (52%), Gaps = 39/529 (7%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY SD + ++ +L + + + G +Q ++R+ Y + K + +I+ E
Sbjct: 50 RYRIVLSDLRNYVQCMLATQANHVMHDGQLQRGSIVRVKQYQAQYL--KGKHVMIILDLE 107
Query: 101 VVS-----------PALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAK 149
V++ ++E+ + F Q + + P + ++++ ++
Sbjct: 108 VMTELGTPDKIGDPKSMEVTTGERQNTTSDSASFYGAQSEPAAQTTPQFQPQAQRQLASR 167
Query: 150 SAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEG 209
+ N P LA T ++P+ +++PY WTIK RVT+K + T+K EG
Sbjct: 168 TGGGGG-----NSGP---LAAT--IYPIEAVSPYVNKWTIKARVTTKSYIGTWKRPTSEG 217
Query: 210 CVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYE 268
+F+V DE G +I+AT FN +FYD Q G VYYIS +++A KQF V NDYE
Sbjct: 218 KLFSVNFLDESG-EIRATAFNTEVDQFYDLLQEGSVYYISTPCKVQMAKKQFSNVANDYE 276
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
+ ++ +E+A ++++ +PQ +FNF I EL + V +D+IGV+++V I+ K
Sbjct: 277 IMFQHDTVIEKAEDQSS-VPQVRFNFCTIQEL-QEVEKDATIDVIGVLKDVGKQEEIQSK 334
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
+ + KR++T+ D+T +V V++W + A +A +VA K ++V DF G
Sbjct: 335 TTQKGYDKRELTLVDDTGYSVRVTIWGKAAAEF------DASLESVVAFKGMRVSDFGGR 388
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL 448
SLS L T+ + PD+PEA KLK WY+++G+G + + S L S+ GA + D + +
Sbjct: 389 SLSLLSSGTMAIDPDIPEAHKLKGWYDAQGRGNTTFATHSHLSSI---GAAAGQKDEMKM 445
Query: 449 THITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQ 506
+ ++G E +F+IK I ++ + Y AC + C+KKVT ++ + CE C
Sbjct: 446 IAQIKSENIGMEDTAYFTIKGTIVHLRQEN-FAYPACISENCSKKVTPSMDDKWRCERCN 504
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
+ RYIM A V D +G W+S F++ A I+G SADE+ ELK++
Sbjct: 505 ITHDRAQYRYIMSADVSDHTGHTWVSCFDDSARIIMGKSADEMMELKNR 553
>gi|398396686|ref|XP_003851801.1| hypothetical protein MYCGRDRAFT_109907 [Zymoseptoria tritici
IPO323]
gi|339471681|gb|EGP86777.1| hypothetical protein MYCGRDRAFT_109907 [Zymoseptoria tritici
IPO323]
Length = 646
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 310/601 (51%), Gaps = 52/601 (8%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
R +FN D ++ +L + ++ + G ++ + RL + N + K + LIV E
Sbjct: 73 RVVFN--DSINFIQGMLATQSNNLINDGTLKRGSICRLTQFTANFV--KDKHILIVVDLE 128
Query: 101 VVSPALEME-IKIEVKSDESGIIFKPKQEDEVKKDGPGIVL-------KPKQ----EMVA 148
V+ E E I V G KP+Q+++VK PG + KP+Q E+ A
Sbjct: 129 VLKEYGEPEKIGQPVAITYDGA--KPEQQEDVKPQ-PGNIAGNGFYGNKPQQQSNSELSA 185
Query: 149 KSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGE 208
+ A + + GN+ P + +++PY WTIK R T KG+++T+ N GE
Sbjct: 186 RPKATVSHNGRGNITP------------IEAVSPYTHKWTIKARCTHKGDIKTWHNKNGE 233
Query: 209 GCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDY 267
G +F+V D+ G +I+AT FN++ ++Y+ G VYYIS +++A KQF V NDY
Sbjct: 234 GKLFSVNFLDDSG-EIRATGFNDSVDQWYEFLTEGNVYYISSPCKVQLAKKQFSNVNNDY 292
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRR 327
E+ ++ VE+A + +PQ ++NF I L + V+ +D IGV+Q V I
Sbjct: 293 ELTFERDTTVEKAEDHDG-VPQVRYNFTDIAAL-QNVDKDTTIDCIGVLQEVGEVNEIVS 350
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG 387
KS N+ KR++T+ D + V +++W + A + +A +VA K +KV DF G
Sbjct: 351 KSTNKPYSKRELTLVDNSGYNVRLTVWGKTAESF------DARPESVVAFKGVKVSDFGG 404
Query: 388 ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL-AKNGARSMYSDRV 446
SLS L ++ + PD+ EA KLK WY+ EG+ + AS + + + A +G R SD
Sbjct: 405 RSLSLLSSGSMNIDPDIDEAYKLKGWYDGEGRNGNFASHANSMAAAGATSGGRP--SDFK 462
Query: 447 SLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-----CNKKVTDALGSGYW 501
++ + + E +FSIKA I +K D + Y AC+T CNKKVT+ +
Sbjct: 463 TIAQVYDDKDGQSETTDWFSIKATIVYVKQD-SFAYPACRTTDPKPCNKKVTEHDEGQWR 521
Query: 502 CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNS 561
CE CQ + + RYIM V D +G+ W+S F+E +++G SA++L LK + GDD
Sbjct: 522 CEQCQMTWDRPNYRYIMSVNVSDHTGQIWLSCFDEVGVQVMGMSANDLMALKEE-GDDKR 580
Query: 562 YQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQ 621
+ + + + +++R R V+ V P+D+A E+K L +I K+ S Q
Sbjct: 581 VGEAFSDANCKSFIFKCKAKMDTFQDQQRVRYQVQYVNPIDYAREAK-KLADIIKQYSIQ 639
Query: 622 N 622
+
Sbjct: 640 D 640
>gi|392871534|gb|EJB12179.1| replication factor-a protein 1 (rpa1) [Coccidioides immitis RS]
Length = 607
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 305/629 (48%), Gaps = 48/629 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLK 54
M ++ A+S I D+ + + +VQ L +KL +RY SD ++
Sbjct: 1 MANNITVGALSAIFD----DTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQ 56
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
+L S+L+ V +G ++ ++L + N + K ++ LIV +V+ E E +
Sbjct: 57 TMLASSLNDLVNNGALRRGCFVQLKSFQANFV--KGKRILIVLDLDVLEDLGECERIGDP 114
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVA--KSAAQILRDQNGN---MAPAARLA 169
K E+ + EV+K P + V S AQ R Q MAP
Sbjct: 115 KPLETKVA-------EVEKPTPTAISSDGFYGVVSEHSVAQPQRHQRATVPTMAPTHA-- 165
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
++P+ +L+PY WTIK R T+K ++ + N GEG +F+V L D+ G +I+AT F
Sbjct: 166 ---NIYPIEALSPYSHKWTIKARCTNKSAIKKWYNRNGEGRLFSVNLLDDSG-EIRATAF 221
Query: 230 NEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
E Y F+ G VYYIS +++A ++F V NDYE+ ++ +E A + +P
Sbjct: 222 KEQCDLLYPLFEEGSVYYISSPCRVQMAKREFSNVNNDYELTFERDTVIERAEDHED-VP 280
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q +FNF I L GT +D++GV++ V P + KS + KR++ + D+T +
Sbjct: 281 QMRFNFTSIGHLHSVEKGTT-IDVLGVLKTVEPVAEVPSKSTGKRYTKRELMLVDDTGYS 339
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAK 408
V +++W +AT+ + +VA K +KV DF G SLS L T+ PD+ EA
Sbjct: 340 VPLTIWGGMATSF------DVMPDSVVAFKGVKVSDFGGRSLSLLNSGTITSDPDIEEAH 393
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARS-MYSDRVSLTHITSNPSLGDEKPVFFSI 467
KLK WY+++GK A+ + G R +Y ++ + N EKP +FS+
Sbjct: 394 KLKGWYDAQGKFDQFATHALSENAAISTGTRQDIYK---AIVEVRDNQLGMTEKPDYFSL 450
Query: 468 KAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
+A + IK D + Y AC + CNKKV + CE C+K+ RYI+ A V D
Sbjct: 451 RATVVFIKQD-TICYPACVQERCNKKVVQVDPEQWLCEHCEKSSLRPEYRYILSANVSDH 509
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G+ W++ F+E I+G A+ L ELK DD + + T L+ +
Sbjct: 510 TGQLWLNCFDEVGRAIMGMPANVLMELKE--SDDKAASEAILHATCQMWNLKCKAKLDNF 567
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
N+ R R V +P++F+ ES L+ I
Sbjct: 568 QNQPRVRYQVLGASPINFSHESSRLVSLI 596
>gi|322783307|gb|EFZ10882.1| hypothetical protein SINV_05412 [Solenopsis invicta]
Length = 587
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 299/586 (51%), Gaps = 46/586 (7%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNK-GLIRLLDYALNEIPTKSEKYLIVTK 98
+RY SDG+K + + + +I +I N+ + ++ +Y L+ + ++ K
Sbjct: 28 DRYRLLVSDGEKLNSFTMLATQLNNLIENDILNEFSICKITNYCLSSVNNNGKE-----K 82
Query: 99 CEVVSPALEMEIKIEVKSDESGI-IFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRD 157
C + L ++I++ V +E G I P I LK +Q+ + S +
Sbjct: 83 CVM----LILDIEVIVSGEEVGRRIGNP----------TNIELKSEQDTPSTSTTTTVHH 128
Query: 158 QNGNM--APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
QNG+ + + R + +L+PYQ W IK RV +K ++T+ N+RGEG F+++
Sbjct: 129 QNGSTRTGNSNHASSDIRTTQIAALSPYQNRWVIKARVINKSPIKTWSNSRGEGKFFSMD 188
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L D+ G +I+ T F E KFYD G VYYISR TL++ANKQ+ T++NDYEM++ ++
Sbjct: 189 LIDKSG-EIRCTAFKEMVDKFYDLIVAGNVYYISRCTLKMANKQYNTMKNDYEMSVTSDT 247
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
+ + + IP ++NF PI ++ +L+D++GVV + ++ +
Sbjct: 248 GIVPCHDNSNDIPTLQYNFSPISQV-ESKEKNDLLDVLGVVTTIGDVQHFTARATGRELI 306
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KRDI++ D++ VTV+LW A +A + I+AIK VG+F G +L
Sbjct: 307 KRDISIVDDSGTMVTVTLWRTQAEEF------DASNNTIIAIKRASVGEFNGRKNLSLTM 360
Query: 396 STVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
S+++ PD+PEA +L+ WY + G + S+ GS NG + + ++
Sbjct: 361 SSIIEKDPDIPEAHRLRGWYTAVGHSETAKSLSRVGGSTDFNGPLYTFQE-------ATD 413
Query: 455 PSLGDEK--PVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDE 510
LG++ P F++ A I IK + ++ YRAC + C KK+ D + CE C K
Sbjct: 414 ARLGEKMNLPDSFTVVATIKQIKTENSL-YRACPVENCKKKLIDQDNGIFRCEKCNKEYP 472
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
+ R + + D +G WI+ FNEEAE+I+G SA EL ELK D ++Y K+ E T
Sbjct: 473 NFTYRLLANMELADATGSRWITAFNEEAEKILGMSAQELGELKEN--DKDAYLQKIGEAT 530
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + + + + + R + +V P+++ L++++SK
Sbjct: 531 FKTFMFNLEARSEVFQDAMRIKHVCTSVRPINYKTYLPHLIDKVSK 576
>gi|145234512|ref|XP_001400627.1| replication factor A protein 1 [Aspergillus niger CBS 513.88]
gi|134057574|emb|CAK37984.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 307/621 (49%), Gaps = 40/621 (6%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLK------LTGNRYMFNASDGKKRLKAILP 58
VS A+S I + P + E VVQ + +K RY SD ++ +L
Sbjct: 9 VSVGALSAIFDDTKPQTR----EPVVQCVQIKPLPAQQSHPERYRAVFSDISNYVQTMLA 64
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
+ L+ V S ++ +RL + N + K +K LI+ EV+ E E + K E
Sbjct: 65 TQLNPMVSSKLLRKGCFVRLKSFQANSV--KGKKILIILDLEVLEGLGEAEKIGDPKPLE 122
Query: 119 SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLV 178
S + DE +K P + S AQ+ + A A ++P+
Sbjct: 123 S-------KTDEDEKHQPTTISSNGFYGSKISGAQVQSNTGVQSARPVLAATHATIYPIE 175
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+++PY WTIK R TSK N+RT+ N EG +F+V L D+ G +I+AT FN+ YD
Sbjct: 176 AISPYSHKWTIKARCTSKTNIRTWHNRNTEGRLFSVNLLDDSG-EIRATGFNDQCDMLYD 234
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
FQ G VYYIS +++A KQF + NDYE+ ++ VE+A ++T +PQ +FNF I
Sbjct: 235 VFQEGGVYYISNCRVQIAKKQFTNLNNDYELTFERDTVVEKAEDQTD-VPQVRFNFTSIG 293
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+L + V +D+IGV++ I K+ N+ KR++ + D T +V +++W A
Sbjct: 294 DL-QSVEKDTTIDVIGVLKEAMDVTQITSKTTNKPYDKRELIMVDNTGFSVRLTIWGSTA 352
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
NA ++A K +KV DF G SLS L ++ V PD+ EA KLK WY+++G
Sbjct: 353 QKF------NASPESVIAFKGVKVSDFGGRSLSLLSSGSMAVDPDIEEAHKLKGWYDAQG 406
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPD 477
+ + +S S LG+ + +M SD+ LG E+ V+FS+KA + IK D
Sbjct: 407 RDENFSSHASLLGT----ASSTMKSDQFKTIAQIREEQLGMSEEAVYFSLKATVIYIKQD 462
Query: 478 Q-AMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ Y AC + CNKKVT+ L G W CE C K + RYIM V D +G+ W+S
Sbjct: 463 NMSFAYPACLSEGCNKKVTE-LDPGQWRCERCDKTHPQPDYRYIMHVNVSDHTGQLWLSC 521
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
F++ ++ SA++L EL D+ + ++ R + ++R R
Sbjct: 522 FDDVGRSMMDISANQLMELFQT--DEKAAGDVFQDANCRTWNFRCRAKIDHFGEQQRIRY 579
Query: 594 TVRAVAPVDFAAESKFLLEEI 614
V + P++++ E+ L + I
Sbjct: 580 QVSSAKPINYSHEAGRLADLI 600
>gi|212528756|ref|XP_002144535.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
marneffei ATCC 18224]
gi|210073933|gb|EEA28020.1| replication protein A 70 kDa DNA-binding subunit [Talaromyces
marneffei ATCC 18224]
Length = 601
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 292/580 (50%), Gaps = 45/580 (7%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY SD ++ ++ + + V G ++ L+RL + N I K +K LI+ E
Sbjct: 47 RYRAVFSDISNYVQTMIATQANHLVKDGILRKGCLVRLKSFQSNAI--KGKKILIILDLE 104
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNG 160
V+ E E + K E+ K EDE +K P M++ + + G
Sbjct: 105 VLQHLGEYEKIGDPKPLET------KAEDE-EKTTP--------TMISGNGVYSTKAPTG 149
Query: 161 NMAPAARLAMTR---RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT 217
+ R + ++P+ +++PY WTIK R TSK ++T+ + EG +F+V L
Sbjct: 150 HGTHNLRQTSSSGHATIYPIEAISPYSHKWTIKARCTSKSAIKTWHRSNSEGKLFSVNLL 209
Query: 218 DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSE 276
D+ G +I+AT FN+ YD FQ G VYYIS +++A KQF + NDYE+ +++
Sbjct: 210 DDSG-EIKATGFNDQCDLLYDIFQEGSVYYISSPCRVQIAKKQFSNLNNDYELTFEKDTI 268
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
VE+A ++ + +PQ +FNF I +L + V +D+IGV++ V T I K+ N+ K
Sbjct: 269 VEKAEDQDS-VPQVRFNFTTIGDL-QSVEKDTTIDVIGVLKEVGQTSQITSKTTNKPYDK 326
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
RD+T+ D T +V +++W LATN N +VA K +KV DF G SLS L
Sbjct: 327 RDLTLVDNTGFSVRLTVWGNLATNF------NTLPESVVAFKGVKVSDFGGRSLSLLSSG 380
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
T V PD+ EA +LK WY+++G+ + AS S + G + D+
Sbjct: 381 TFTVDPDIEEAHRLKGWYDAQGRSDTFASHASMSDGVTSGGGK---LDQYKTIAQIREEQ 437
Query: 457 LG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEEC 512
LG E FFS+KA I IK D Y AC + CNKKV++ L G W CE C K +
Sbjct: 438 LGMSEAADFFSLKATIIYIKQDNVS-YPACPSQDCNKKVSE-LDPGQWRCERCDKTYPKP 495
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK--LKEVT 570
RYIM+ V D +G+ W++ F+E I+G +AD+L ++++ N Y+ +E
Sbjct: 496 EYRYIMLINVSDHTGQLWLNCFDEVGRLIMGTTADDLVNMEAE----NKYESSELFQEAN 551
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
R Y ++R R + + PV+++ E+ L
Sbjct: 552 CQTWNFRCKAKMDHYGEQQRIRYQISSARPVNYSDEATRL 591
>gi|367015496|ref|XP_003682247.1| hypothetical protein TDEL_0F02250 [Torulaspora delbrueckii]
gi|359749909|emb|CCE93036.1| hypothetical protein TDEL_0F02250 [Torulaspora delbrueckii]
Length = 616
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 262/450 (58%), Gaps = 22/450 (4%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+R + + L+PYQ WTIK RV+ KG+++T+ N +GEG +FNV D G +I+AT FN
Sbjct: 177 SRPIFAIEQLSPYQNMWTIKARVSYKGDIKTWHNQKGEGKLFNVNFLDTSG-EIRATAFN 235
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
E A KF + Q G+VYYIS+ L+ A QF + + YE++++ ++ VEE +E+ +P+T
Sbjct: 236 EMATKFNEILQEGRVYYISKARLQPAKPQFTNLTHPYELSMDRDTVVEECFDESN-VPKT 294
Query: 291 KFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
F+F ++ + + N T VD++G++Q V+P + ++ + +RDI + D++ ++
Sbjct: 295 HFSFTKLNAIPNQEANST--VDVLGIIQTVNPQFELTSRAGKKFD-RRDIDIVDDSGYSI 351
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
TV LWN+ A + N + +VA K ++V DF G SLS ST++ +P++PEA
Sbjct: 352 TVGLWNQQAVDF------NLAEGSVVAFKGIRVTDFGGKSLSMGFTSTMIPNPEVPEAYA 405
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGAR--SMYSDRVSLTHITSNPSLG-DEKPVFFS 466
LK WY+ +G + +S+ G+ A +GA S R+S+ N +LG EK FFS
Sbjct: 406 LKGWYDQKGHSENFSSLKQEAGA-ASSGANLAKFISQRISIA-TAQNENLGRSEKGDFFS 463
Query: 467 IKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
IK ++ +K D Y AC + CNKKV + + CE C N++ RY++ V D
Sbjct: 464 IKGAVNFLKVDN-FAYPACSNENCNKKVIEESDGTWRCEKCDTNNQAPDWRYMLTLSVLD 522
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+G+ W+++FN++A++++G A+EL +K D + + ++ + + R+ +
Sbjct: 523 ETGQMWVTVFNDQAKQLLGIGANELMAMKD--NDADLFTKTIQGIQMNQYDFRIRAREDN 580
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
YNN+ R R T+ + ++F AE+ +L EE+
Sbjct: 581 YNNQSRIRYTISNLHLLNFKAEADYLAEEL 610
>gi|119480455|ref|XP_001260256.1| replication factor A 1, rfa1 [Neosartorya fischeri NRRL 181]
gi|119408410|gb|EAW18359.1| replication factor A 1, rfa1 [Neosartorya fischeri NRRL 181]
Length = 603
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 317/628 (50%), Gaps = 55/628 (8%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILP 58
+S A+S I P I E +VQ + +K RY SD ++ +L
Sbjct: 9 ISVGALSAIFDETKPQ----IHEPIVQCVQIKPLPPQPNHQERYRAVFSDISNYVQTMLA 64
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
+ + V SG ++ +RL + N + K +K LI+ EV+ E E E K E
Sbjct: 65 TQANPLVTSGMLKKGCFVRLKSFQANSV--KGKKILIILDLEVLQELGEAEKIGEPKPLE 122
Query: 119 SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAP---AARLAMTRR-- 173
+ + +EDE +P+ ++ + QN P AR ++T
Sbjct: 123 NKL-----EEDE----------RPQPTTISGGGFYGSKVQNQRGEPRVQPARSSLTSTHA 167
Query: 174 -VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
++P+ +++PY WTIK R TSK ++T+ N EG +F+V L D+ G +I+AT FNE
Sbjct: 168 TIYPIEAISPYSHKWTIKARCTSKSAIKTWHNRNSEGRLFSVNLLDDSG-EIRATGFNEQ 226
Query: 233 ARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
YD F G VYYIS +++A KQF + NDYE+ +++ VE+A +++ +PQ +
Sbjct: 227 CDLLYDVFHEGSVYYISSPCRVQIAKKQFTNLNNDYELTFEKDTVVEKAEDQSD-VPQVR 285
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
FNF + +L + V +DIIGV+++V T I K+ ++ KR++T+ D + +V +
Sbjct: 286 FNFTTVGDL-QSVEKDTTIDIIGVLKDVGETTQIVSKTTSKPYDKRELTLVDSSGFSVRL 344
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
++W A N NA ++A K +KV DF G SLS L ++ V PD+ EA +LK
Sbjct: 345 TIWGSTALNF------NATPESVIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHRLK 398
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAY 470
WY+++G+ + S +++ + +M D + LG E V+FS+K
Sbjct: 399 GWYDAQGRHETFTS----HATMSNASSSAMRLDHLKTIAQIREEQLGMSEDAVYFSLKGT 454
Query: 471 ISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSG 527
+ IK D M Y AC + CNKKVT+ L G W CE C K RYIM+ V D +G
Sbjct: 455 VIYIKQDN-MCYPACLSEGCNKKVTE-LDPGQWRCESCDKTHPRPEYRYIMLINVSDHTG 512
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
+ W+S F+E ++++G SAD+L +L+ Q G+ + + +E R + +
Sbjct: 513 QLWLSCFDEVGKQLMGTSADQLMDLR-QNGEKAAGDI-FQEANCRTWNFRCRAKLDHFGD 570
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEIS 615
++R R V PV+++ E+ L+ I+
Sbjct: 571 QQRIRYQVSTAKPVNYSEEASRLMALIN 598
>gi|452819200|gb|EME26268.1| replication factor A1 [Galdieria sulphuraria]
Length = 648
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 245/444 (55%), Gaps = 17/444 (3%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V + SLNPYQ W IK RV+S+G +R Y+NA+GEG VF+ E+ D + I+ T F E A
Sbjct: 213 VQSIASLNPYQNKWIIKGRVSSRGEIRHYQNAKGEGSVFSFEIMDSTAS-IKVTAFRENA 271
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
Y ++GKVY IS+G L+ A+K+F +YEM + N+EV V + +P F+
Sbjct: 272 SSLYKLIEIGKVYRISKGVLKPADKRFNKTSFEYEMIADNNTEVV-PVEDVGEVPNVIFH 330
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F I L V G + D++G+V++VS S+ ++ + KR + + D++ +T+ ++L
Sbjct: 331 FTKIANLENIVAG-QFCDVLGIVKDVSELSSVVSRTTGITLAKRTVVLMDDSLKTIRLTL 389
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W ++A N LL +++ +PI+ K ++ GDF GISL +S V+PD+ EA +L+ W
Sbjct: 390 WKDIAEN----LLHSSEGNPILLCKGVRRGDFNGISLDATVQSCFEVNPDIAEAHELRGW 445
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN--PSL-GDEKPVFFSIKAY 470
YE+ GK +S+ G SL+ + +R ++ + P L D + V F ++ Y
Sbjct: 446 YETTGKHQETSSL-EGATSLSLGNTK----ERKTILQASEEDIPKLINDPRGVQFIVRGY 500
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
+ I+ + +WY A NKKVT + + C+ K C+ RYI+ + D +G
Sbjct: 501 LHYIRKEGTLWYTASPDDNKKVTKLDENRWVCDATGKEYSYCNYRYILSVAIQDATGSLN 560
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+ F++ R+IG SA+EL + + D + + +V + P + R+ Q +N+E R
Sbjct: 561 ANAFDDVGSRLIGRSAEELAAIYER--DRAEFDAIIDDVLFKPFIFRIRAKQNTWNDELR 618
Query: 591 QRVTVRAVAPVDFAAESKFLLEEI 614
R + V P+ F++ES+ LL EI
Sbjct: 619 LRYHIVNVEPIHFSSESQLLLNEI 642
>gi|17737841|ref|NP_524274.1| replication protein A 70 [Drosophila melanogaster]
gi|2498844|sp|Q24492.1|RFA1_DROME RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein; Short=DmRPA1
gi|1359608|emb|CAA94241.1| replication protein A [Drosophila melanogaster]
gi|7299004|gb|AAF54206.1| replication protein A 70 [Drosophila melanogaster]
gi|17861998|gb|AAL39476.1| LD04815p [Drosophila melanogaster]
gi|220943002|gb|ACL84044.1| RpA-70-PA [synthetic construct]
gi|220953088|gb|ACL89087.1| RpA-70-PA [synthetic construct]
Length = 603
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 312/601 (51%), Gaps = 46/601 (7%)
Query: 29 VVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+Q+L +K + RY SDGK A+L S L+ +G ++ +++L Y
Sbjct: 24 VLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYV 83
Query: 83 LNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD-GPGI 138
+ + ++ LI+++ VV+P E++ KI +P E+ K+D P
Sbjct: 84 TSLVGKDGAGKRVLIISELTVVNPGAEVKSKIG----------EPVTYENAAKQDLAPKP 133
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
+ + +AK + N M + MT HP+ SL+PYQ W IK RVTSK
Sbjct: 134 AVTSNSKPIAKKEPSHNNNNNIVMNSSINSGMT---HPISSLSPYQNKWVIKARVTSKSG 190
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+RT+ NARGEG +F+++L DE G +I+AT F E KFYD Q+ VYYIS+ L+ ANK
Sbjct: 191 IRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANK 249
Query: 259 QFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
Q+ ++ N YEM + + V+ E ++ IP+ K+N VPI ++ N VD IG+
Sbjct: 250 QYSSLNNAYEMTFSGETVVQLCEDTDDDP-IPEIKYNLVPISDVSGMENKAA-VDTIGIC 307
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+ V S ++ N+ KRDIT+ D + ++++LW + A N + P++
Sbjct: 308 KEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHV------QPVIL 361
Query: 377 IKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
+K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G S+A++ S A+
Sbjct: 362 VKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDSVANMVS-----AR 415
Query: 436 NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT 493
G S ++ ++L + +KP +F KA + ++K + A +YRAC CNKKV
Sbjct: 416 TGGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENA-FYRACPQSDCNKKVV 474
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
D + CE C R ++ + D + W+S FNE E+++G ++ E+ E
Sbjct: 475 DEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEAL 534
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEE 613
D + + + H+ ++ + Y + R ++TV++VAP++ +K LL+E
Sbjct: 535 EN--DPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKE 592
Query: 614 I 614
+
Sbjct: 593 L 593
>gi|50553160|ref|XP_503990.1| YALI0E15642p [Yarrowia lipolytica]
gi|49649859|emb|CAG79583.1| YALI0E15642p [Yarrowia lipolytica CLIB122]
Length = 589
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 255/474 (53%), Gaps = 37/474 (7%)
Query: 161 NMAPAARLAMTRR-------------VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
N PA R+A T V P+ L+PYQ W IKVRVTSK + + + N +G
Sbjct: 133 NPTPAKRMASTNEIPAGVQAQGFPATVMPIERLSPYQNKWAIKVRVTSKADKKKFSNTKG 192
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
EG +FNV DE G +I+AT FN+ KFY + G+VYY+++ + +ANK+F V NDY
Sbjct: 193 EGQLFNVTFIDETG-EIRATGFNQEVDKFYPMLEEGQVYYVTQCRVSMANKKFSNVNNDY 251
Query: 268 EMNLNENSEVEEAVN-ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIR 326
E+ ++ + +A E A IP ++FV +D+L G VD++GVVQNV P
Sbjct: 252 ELVFGRDTVIIQADEAEAAAIPTANYSFVTLDKLQDVEVGNN-VDVLGVVQNVGPLEDGV 310
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ 386
K+ +R++ + D++ ++ + E AT+ + I+AIK +VGDF
Sbjct: 311 AKATGNPYKRRNLMLGDKSGFATRLTFFGEKATSFDE---GTVPVGTIIAIKGARVGDFN 367
Query: 387 GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRV 446
G +LST ST+ V P + E LK WY SEGK TS + + + + V
Sbjct: 368 GRNLSTSHSSTIAVEPAIDETYALKGWYASEGKQTSFKQLQT-----------TTTNKPV 416
Query: 447 SLTHI-TSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWC 502
+ T I + S G EKP +++++A++ ++ Y AC+T CNKKV + G + C
Sbjct: 417 AATPIDVATSSYGQSEKPDYYTLQAWVVHVRTGN-FAYPACQTPDCNKKVVEH-GDEWRC 474
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E C+KN ++ RYI+ V D +G W++ FNE AE I+G +AD+L E+++ GDD +
Sbjct: 475 EKCEKNMDKPLYRYILSINVGDATGSMWLTAFNEPAEVIMGMTADQLTEIQTSQGDD-EF 533
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ +++VT + LR Q+ YN E + R V +D+ + L++++ +
Sbjct: 534 EQAVQKVTGKQYTLRCRSKQEFYNEESKARHQVLTAQALDYLKDIDELIKDLDQ 587
>gi|303316318|ref|XP_003068161.1| replication factor-A protein 1 family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107842|gb|EER26016.1| replication factor-A protein 1 family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 605
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 310/631 (49%), Gaps = 54/631 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLK 54
M ++ A+S I D+ + + +VQ L +KL +RY SD ++
Sbjct: 1 MANNITVGALSAIFD----DTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQ 56
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
+L S+L++ V +G ++ ++L + N + K ++ LIV +V+ E E +
Sbjct: 57 TMLASSLNNLVNNGALRRGCFVQLKSFQANFV--KGKRILIVLDLDVLEDLGECERIGDP 114
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVA--KSAAQILRDQNGN---MAPAARLA 169
K E+ + EV+K P + V SAAQ R Q + MAP
Sbjct: 115 KPLETKVA-------EVEKPTPTAISSDGFYGVVSEHSAAQPQRHQRASVPTMAPTHA-- 165
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
++P+ +L+PY WTIK R T+K ++ + N GEG +F+V L D+ G +I+AT F
Sbjct: 166 ---NIYPIEALSPYSHKWTIKARCTNKSAIKKWYNRNGEGRLFSVNLLDDSG-EIRATAF 221
Query: 230 NEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
E Y F+ G VYYIS +++A ++F V NDYE+ ++ +E+A + +P
Sbjct: 222 KEQCDLLYPLFEEGSVYYISSPCRVQMAKREFSNVNNDYELTFERDTVIEKAEDHED-VP 280
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q +FNF I L GT +D++GV++ V P + KS + KR++ + D+T +
Sbjct: 281 QMRFNFTSIGHLHSVEKGTT-IDVLGVLKTVEPVAEVPSKSTGKRYTKRELMLVDDTGYS 339
Query: 349 VTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V +++W +AT+ D P +VA K +KV DF G SLS L T+ PD+ E
Sbjct: 340 VPLTIWGAMATSF--------DVMPDSVVAFKGVKVSDFGGRSLSLLNSGTITSDPDIEE 391
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARS-MYSDRVSLTHITSNPSLGDEKPVFF 465
A KLK WY+++GK A+ + G R +Y ++ + N EKP +F
Sbjct: 392 AHKLKGWYDAQGKFDQFATHALSENAAISTGTRQDIYK---AIVEVRDNQLGMTEKPDYF 448
Query: 466 SIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
S++A + IK D + Y AC + CNKKV + CE C+K+ RYI+ A V
Sbjct: 449 SLRATVVFIKQD-TICYPACVQERCNKKVVQVDSEQWLCEHCEKSSLRPEYRYILSANVS 507
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G+ W++ F+E I+G A+ L ELK DD + + T L+
Sbjct: 508 DHTGQLWLNCFDEVGRAIMGMPANVLMELKE--SDDKAASEAILHATCQMWNLKCKAKLD 565
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ N+ R +V +P++F+ ES L+ I
Sbjct: 566 NFQNQPRYQVL--GASPINFSHESSRLVSLI 594
>gi|320037894|gb|EFW19830.1| replication factor-A protein 1 [Coccidioides posadasii str.
Silveira]
Length = 605
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 310/631 (49%), Gaps = 54/631 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLK 54
M ++ A+S I D+ + + +VQ L +KL +RY SD ++
Sbjct: 1 MANNITVGALSAIFD----DTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQ 56
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
+L S+L++ V +G ++ ++L + N + K ++ LIV +V+ E E +
Sbjct: 57 TMLASSLNNLVNNGALRRGCFVQLKSFQANFV--KGKRILIVLDLDVLEDLGECERIGDP 114
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVA--KSAAQILRDQNGN---MAPAARLA 169
K E+ + EV+K P + V SAAQ R Q + MAP
Sbjct: 115 KPLETKVA-------EVEKPTPTAISSDGFYGVVSEHSAAQPQRHQRASVPTMAPTHA-- 165
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
++P+ +L+PY WTIK R T+K ++ + N GEG +F+V L D+ G +I+AT F
Sbjct: 166 ---NIYPIEALSPYSHKWTIKARCTNKSAIKKWYNRNGEGRLFSVNLLDDSG-EIRATAF 221
Query: 230 NEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
E Y F+ G VYYIS +++A ++F V NDYE+ ++ +E+A + +P
Sbjct: 222 KEQCDLLYPLFEEGSVYYISSPCRVQMAKREFSNVNNDYELTFERDTVIEKAEDHED-VP 280
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q +FNF I L GT +D++GV++ V P + KS + KR++ + D+T +
Sbjct: 281 QMRFNFTSIGHLHSVEKGTT-IDVLGVLKTVEPVAEVPSKSTGKRYTKRELMLVDDTGYS 339
Query: 349 VTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V +++W +AT+ D P +VA K +KV DF G SLS L T+ PD+ E
Sbjct: 340 VPLTIWGAMATSF--------DVMPDSVVAFKGVKVSDFGGRSLSLLNSGTITSDPDIEE 391
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARS-MYSDRVSLTHITSNPSLGDEKPVFF 465
A KLK WY+++GK A+ + G R +Y ++ + N EKP +F
Sbjct: 392 AHKLKGWYDAQGKFDQFATHALSENAAISTGTRQDIYK---AIVEVRDNQLGMTEKPDYF 448
Query: 466 SIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
S++A + IK D + Y AC + CNKKV + CE C+K+ RYI+ A V
Sbjct: 449 SLRATVVFIKQD-TICYPACVQERCNKKVVQVDSEQWLCEHCEKSSLRPEYRYILSANVS 507
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G+ W++ F+E I+G A+ L ELK DD + + T L+
Sbjct: 508 DHTGQLWLNCFDEVGRAIMGMPANVLMELKE--SDDKAASEAILHATCQMWNLKCKAKLD 565
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ N+ R +V +P++F+ ES L+ I
Sbjct: 566 NFQNQPRYQVL--GASPINFSHESSRLVSLI 594
>gi|255076569|ref|XP_002501959.1| predicted protein [Micromonas sp. RCC299]
gi|226517223|gb|ACO63217.1| predicted protein [Micromonas sp. RCC299]
Length = 867
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 264/483 (54%), Gaps = 32/483 (6%)
Query: 153 QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
Q + Q N R R+ P+ SLNPY WTI+VRVT++ +RT+ NARG+G V
Sbjct: 213 QNIPPQYSNRGAVMRNEAPHRITPISSLNPYMNRWTIRVRVTNQPAIRTWHNARGDGKVL 272
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTL-RVANKQFKTVQNDYEMNL 271
NV+L D +G +I+A FN+ A KF FQ G+VY IS+G + +V NK++ + ++E+ L
Sbjct: 273 NVDLLDSEGGEIKAVCFNDTAEKFSQVFQGGRVYDISKGAISQVKNKKY-SGGAEFEIRL 331
Query: 272 NENSEVEEAVNETAF--IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKS 329
+ S V+E + A I + +NF I + + G ++D+IGVV V +I ++
Sbjct: 332 DNTSLVDEVTDPQAVASIKKIHYNFQKIASIEDAMVGG-MIDVIGVVHTVGDLATIMKRD 390
Query: 330 NNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQG 387
E KR + + D++ +V +++W A ++G +L + N + P++A+K+ +VG+FQG
Sbjct: 391 GGE-TSKRSVHIRDDSGASVELTMWAPHAVDIGGKLEAMVNGGEHPVLAVKNGRVGEFQG 449
Query: 388 ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR-V 446
++ T+G + + V+PDL EA KL+ WY++EG T+ + +L G DR V
Sbjct: 450 KNIGTVGSTNIDVNPDLTEAAKLRHWYDAEGGATATVA------TLGGGGGGGGKGDRCV 503
Query: 447 SLTHITSN-PSLGDEKPVFFSIKAYISLIKP--DQAMWYRAC------KTCNKKVTDALG 497
S+ + +G P + + +I+ IK D +Y AC + C KK+
Sbjct: 504 SIAQLKDEIAQIGANPPFWVQCRCHITYIKAPQDSGPYYPACPLQNGDRMCQKKLRFDEA 563
Query: 498 SGYWCEGCQKNDEE----CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
G W C+++ E C RYI+ V D +G+ W+S F ++ + I+G A EL+ L
Sbjct: 564 QGSW--NCERHSGEHVPHCEWRYILNMTVSDHTGQHWVSAFGDQGDVIMGMKASELHRLY 621
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEE 613
+ + +Y+ L+ + H++++ V + YN E R + + + +D+ AESK +L++
Sbjct: 622 ND--NHAAYEQALQNANFTSHMMKLKVKEDNYNGETRPKTELSRIEVIDYVAESKRMLDK 679
Query: 614 ISK 616
I+K
Sbjct: 680 IAK 682
>gi|387916032|gb|AFK11625.1| replication protein A [Callorhinchus milii]
Length = 611
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 262/482 (54%), Gaps = 27/482 (5%)
Query: 142 PKQEMVAKSAAQILRDQNG-NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMR 200
P Q +AK+ ++ L +G P +V P+ LNPYQ WTI+ RVT+K +R
Sbjct: 146 PAQGGLAKTESRTLSKPSGVKTLPNTPGGTQAKVVPIACLNPYQSKWTIRARVTNKSQIR 205
Query: 201 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQF 260
T+ N+RGEG +F++EL DE G +I+A F + KF+ ++ KVYY+S+GTL+ ANKQ+
Sbjct: 206 TWSNSRGEGKLFSIELLDESG-EIRAAAFTDQVDKFFPLIEVNKVYYVSKGTLKTANKQY 264
Query: 261 KTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS 320
+V+NDYEM N ++ V ++ +P+ +F F+PID+L N ++DIIGV ++
Sbjct: 265 TSVKNDYEMTFNNDTTV-IPCDDGDNLPKVQFEFIPIDQLDTK-NKDTMIDIIGVCKSYE 322
Query: 321 PTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL 380
I ++ N V KR++ + D + + VT +LW E A E D + + P++AIK
Sbjct: 323 EVSKITVRTTNREVSKRNVQLLDMSGKIVTATLWGEDA-----EKFDGSGQ-PVLAIKGA 376
Query: 381 KVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNG 437
++ D+ G SLS ST++V+PD+PEA KL+ W+++EG+ G S++ + G +
Sbjct: 377 RLSDYGGRSLSVTSSSTLMVNPDIPEAFKLRGWFDTEGQVVEGISISDLKGGSFGGGNSN 436
Query: 438 ARS-MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTD 494
++ M + +L H EK +++ I +K + M Y+AC T CNKKV D
Sbjct: 437 WKTLMEAKSENLGH--------GEKADYYTCVGTIVYLKKENCM-YQACPTSDCNKKVID 487
Query: 495 ALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS 554
Y CE C + R I+ + D W++ F E E I+G + L ELK
Sbjct: 488 QQNGLYRCEKCDREFPNFKYRLILSVNLADFGDNQWVTCFQETGEGILGQNCLYLGELKD 547
Query: 555 QLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ +++ ++ + + R+ V + YN+E R + T+ V PVD SK L+ I
Sbjct: 548 S--NEQAFEEIFQQANFRSYTCRIRVKLETYNDESRIKATMMDVKPVDHKEYSKRLIMNI 605
Query: 615 SK 616
K
Sbjct: 606 RK 607
>gi|307109191|gb|EFN57429.1| hypothetical protein CHLNCDRAFT_30347 [Chlorella variabilis]
Length = 721
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 302/634 (47%), Gaps = 75/634 (11%)
Query: 28 IVVQVLDLKLTGN------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDY 81
+ +QVL LK N R+ SDG+ +L + L+ + + ++ ++ L DY
Sbjct: 23 MTLQVLGLKRLQNAQAQQDRFRALLSDGEYSHSCMLATQLAELIHTNTLKENSIVTLHDY 82
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPG---- 137
N++ K K +IV EV V+SD I P+ D+V G
Sbjct: 83 ISNQVQNK--KVVIVLNLEV------------VQSDAQKI-GDPQMYDKVHAGGGAPPAQ 127
Query: 138 ----------------------IVLKPKQEMVAKSAAQILRDQNGNMAP--AARLAMTRR 173
G P AR
Sbjct: 128 NGAGPPPQQYGGPPPQQYGGPPQAYNAGGGFGGPPPGNQPGSAYGGPPPNQVARNEAPSH 187
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ +LN YQ WTIK RVT+K ++R Y NARGEG F+ +L D G +I+ +N+
Sbjct: 188 IMPINALNSYQNRWTIKARVTNKSDIRRYTNARGEGKFFSFDLLDAQGGEIRVVCWNDQC 247
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
++ GKVY IS+ +LR F ++ YE++L ENS V EA NE IP FN
Sbjct: 248 DRWEPVIDQGKVYLISKASLRNKRGNFNQTRHQYEIHL-ENSSVVEACNEEDDIPHIYFN 306
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F I + G L D+IGVV+NV ++I ++ + KR +T+ D++ R++ ++L
Sbjct: 307 FCKIAAVEDTPPGNSL-DVIGVVENVMDWVTITKRDGTD-TQKRSLTIRDDSNRSIELTL 364
Query: 354 WNELATNVGQEL---LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKK 409
W + A G L N PIVAIKS +VGDF G +LST+ STV+V P D+PEA +
Sbjct: 365 WGKYANEPGDHLQAAFQNG-VHPIVAIKSARVGDFNGKTLSTVASSTVMVDPLDVPEAVQ 423
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
L+ WY+S G +M + S +N R++L I EKP + +
Sbjct: 424 LRQWYDS--GGATMVAEALSRPSGGRN------DRRITLAQIKDEGLGLGEKPDWVLVSG 475
Query: 470 YISLIKPDQAMWYRAC-------KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
I+ ++ ++ M+Y AC + CNKK+ D + CE C N E RY++ ++
Sbjct: 476 AITFLR-NENMFYAACPNKLAEGRQCNKKLQDNQDGTWSCERCNGNFEP-EYRYMLNFQL 533
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
D +GEAW++ F E+ I+G SA +L +++ L D+ + ++++ + +L+++ V
Sbjct: 534 SDHTGEAWVTAFQEQGLDIMGRSAADLKDMQQTL-DEGDFSSYMQDLNFRHYLMKLKVTN 592
Query: 583 QEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ YN+E + R + +V +F E K LL+ I K
Sbjct: 593 EVYNDETKLRTSAVSVMAPNFTQEGKALLDMIGK 626
>gi|409045840|gb|EKM55320.1| hypothetical protein PHACADRAFT_255854 [Phanerochaete carnosa
HHB-10118-sp]
Length = 540
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 245/452 (54%), Gaps = 31/452 (6%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
R P+ L+PYQ NWTI+V+VT K ++R Y NARG+G +F+ L D+ G +I+AT FN
Sbjct: 107 RHTFPIEGLSPYQNNWTIRVKVTQKSDIRQYSNARGDGKLFSAVLMDDTG-EIKATAFNN 165
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
+FY + + GK+YYIS+G + +A K+F V N+YE+ L + +EE +
Sbjct: 166 NVDEFYPKLEEGKIYYISKGQVSLAKKKFNNVNNEYELGLQRGTIIEECRDGPVL--NIH 223
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
+ F+P+D+L N + +D++G+V+ +S + + N++ KR++T+ D + +V +
Sbjct: 224 YKFIPLDQLMN-TNPGDTIDVLGIVKEMSDVTHLTSRQGNDLT-KRELTIVDRSGASVRL 281
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
+LW + A + PI+A KS+KVGDF G SLS L S++ ++PD+P+A L+
Sbjct: 282 TLWGKQADRYCES------GEPIIAWKSVKVGDFGGRSLSMLSSSSMEINPDIPDAHVLR 335
Query: 412 SWYESEGK------GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
WY+++GK TS A GSG G+ ++ R L + S G +KP FF
Sbjct: 336 GWYDTDGKVQDFQPQTSSAPRGSG-GAFNRDEIR-------LLDDVRSANLGGGDKPDFF 387
Query: 466 SIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
S A I IK D + Y AC+ CNKKV + G+ CE C K E S RYIM V
Sbjct: 388 SAHATIMHIKSDN-IAYPACQNQGCNKKVIEQ-HDGWRCEKCDKVFERPSYRYIMAMAVA 445
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D SG+ W FNE I +AD+L ELK + DD Y L+ + +
Sbjct: 446 DHSGQVWFQCFNEAGVVIFDMTADQLVELKDR--DDAQYNKVLESAVGTTYNFTCRAKME 503
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ R R V+ + P+D+ E +L++ +S
Sbjct: 504 SFQENNRVRYGVQKILPLDYKEEGNYLMKLLS 535
>gi|344303316|gb|EGW33590.1| hypothetical protein SPAPADRAFT_135958 [Spathaspora passalidarum
NRRL Y-27907]
Length = 626
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 259/461 (56%), Gaps = 37/461 (8%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R+ P+ +++PYQ NWTIK RV+ KG++RT+ NA+G G +F+V DE +I+AT FNE
Sbjct: 179 RITPIETISPYQNNWTIKARVSYKGDLRTWSNAKGTGQLFSVNFLDE-SDEIKATAFNET 237
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A + Y+ + GKVYYIS+ + A K+F + + YE+ + +++E+ E + T +P+ F
Sbjct: 238 AERAYNLLEEGKVYYISKARVAAAKKKFNHLTHPYEITMEKDTEITECFDNTN-VPKLHF 296
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NFV ++++ + + +VD+IG ++ V+ I KS + +R+IT+ DET + +
Sbjct: 297 NFVKLNKI-QDLESNAIVDVIGALKIVNEPFKITAKSTGKEFDRRNITIVDETGFAIEMG 355
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LWN A N ++ I+A K KV D+ G SL+ + +V+ +P+ PEA +LK
Sbjct: 356 LWNNTAVEF------NIEQGSIIAFKGCKVQDYNGRSLTLTQQGSVIPNPESPEAYQLKG 409
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARS-MYSDRVSLTHITSNPSLGD-EKPVFFSIKAY 470
WY+++G S S+ + +GA S +R S+ + +LG EKP +F++KA
Sbjct: 410 WYDNQGINESFKSL-----KVESSGASSNQIENRKSIAQ-AQDENLGKGEKPDYFTVKAT 463
Query: 471 ISLIKPDQAMWYRAC----------------KTCNKKVTDALGSGYW-CEGCQKNDEECS 513
IS KPD Y AC + CN+K+ + G W CE C N E +
Sbjct: 464 ISYTKPD-TFAYPACPNVVASNAGSQQARPSQPCNRKLVEQPTDGTWRCERCDINYPEPT 522
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RYI + D +G+ W+++F+ EA ++ G A EL ++K + D + + +++++++
Sbjct: 523 YRYIYNCSILDETGQIWVTLFDNEARKLFGIDAGELTKIKEE--DQDEFTRRIEDISFKE 580
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ R+ Q YN++ R R + +D++ E+++L +++
Sbjct: 581 YQFRLRARQDTYNDQLRVRYQAVGIDFIDYSTEAEYLCKQL 621
>gi|226502879|ref|NP_001151792.1| DNA binding protein [Zea mays]
gi|195649707|gb|ACG44321.1| DNA binding protein [Zea mays]
gi|223945267|gb|ACN26717.1| unknown [Zea mays]
gi|413942327|gb|AFW74976.1| DNA binding protein [Zea mays]
Length = 876
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 257/453 (56%), Gaps = 25/453 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R+ PL LNPY WTIKVRVT+K ++R Y NARG G VF+ +L DE +I+AT FN
Sbjct: 272 RLVPLAQLNPYLDKWTIKVRVTAKTDLRFYNNARGAGKVFSFDLLDEQRGEIRATCFNTQ 331
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A +F++ ++ KVY IS+G+L+ A K+F ++ ++YE++L+ + +E ++ + IP+ ++
Sbjct: 332 ADQFFNLIEVDKVYLISKGSLKPAQKKFNSLNHEYEISLDSRTSIEVCADDDSNIPRQQY 391
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I E+ + ++D+IG+V +V P+++ RK E +R + + D + R+V ++
Sbjct: 392 NFRKISEI-ENIEKDAILDLIGIVTSVGPSVTFIRKDGVE-TQRRTLELKDMSGRSVQLT 449
Query: 353 LWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
LW +L G +L L ++ +P++A+K +V D+ G S+S+ G + + + P++PEA+ L
Sbjct: 450 LWGKLCVAEGNQLQSLCDSGLNPVLALKGARVTDYSGRSVSSAGSTQLKIDPEIPEAESL 509
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKA 469
+ WY + GK + S+ S+ G + R S+ I + +LG EKP F ++KA
Sbjct: 510 RRWYATGGKTAACVSL-----SVVSMGGTCV---RKSIAQI-KDENLGQLEKPDFITVKA 560
Query: 470 YISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARV 522
IS + D Y AC + CNKKVTD G G W C+ C ++ C RY++ ++
Sbjct: 561 AISHLIADN-FCYPACTIDVNGRMCNKKVTDN-GDGTWRCDKCDQSLPNCEYRYVLNGQI 618
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
D SG + F + A+ +IG S ELN + + D + L+ W L + V +
Sbjct: 619 QDHSGVTNFTAFEDAAKVMIGHSGHELNNISVE--DSERFAEILQAARWQQFLFTLKVKE 676
Query: 583 QEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ YN+ + + + +D A ES +LL I+
Sbjct: 677 EIYNDAPQVKCNITKAEKLDPAIESSYLLGVIN 709
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN-------RYMFNASDGKKRL 53
M+ ++P A++ + ++ D + + + V+QV+D+++ N R+ SDG+ +
Sbjct: 1 MEPQLTPGAVAAVSAHA--DGNGTL-QPVLQVVDVRMVNNAKNPSAERFRMVLSDGEHTM 57
Query: 54 KAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTK-------CEVVSPAL 106
+++L + ++ V G+IQ ++ LL+ + I +S + +IV K C ++
Sbjct: 58 QSMLATAENARVRDGSIQKGSIVHLLECTCSTI--QSRRIIIVIKLDVLQSECAIIGNPR 115
Query: 107 EMEIKIEVKSDESGIIFKPKQEDE-VKKDGPGIVLKPKQEMVAKSAAQI 154
E++ + + I Q + GPG++ P A+ A +
Sbjct: 116 PYEMRNQPNEQGTNIPANAAQANTGTYSSGPGLLGSPAASRPAQVANNV 164
>gi|326474770|gb|EGD98779.1| replication protein A DNA-binding subunit [Trichophyton tonsurans
CBS 112818]
Length = 598
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 189/632 (29%), Positives = 310/632 (49%), Gaps = 55/632 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT----GNRYMFNASDGKKRLKAI 56
M +S A+S + + P +P+ ++Q L +K +RY SD ++ +
Sbjct: 1 MANQISVGALSAMFDSTKPH----VPQPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTM 56
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
LP+ L+S V G ++ +RL ++ ++ + K + LI+ EV+S E E + K
Sbjct: 57 LPTQLNSYVTDGILRRGSFVRLTNFQVSVV--KGKHLLIIMGLEVLSALGEAERIGDPKP 114
Query: 117 DESGIIFKPKQEDEVKKDGPGIVLK-------PKQEMVAKSAAQILRDQNGNMAPAARLA 169
+PK DE+ G L P+ + I R + M A
Sbjct: 115 ------LEPKSGDEMG--GQSTTLSSNEFYNAPQTHNPPQQFQNIQRSRPSGMTSNAN-- 164
Query: 170 MTRRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
+ + +L+P+ N WTIK R T K N++T+KN GEG +F+V L D+ G +I+AT
Sbjct: 165 ----IFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGEGKLFSVNLLDDSG-EIRATA 219
Query: 229 FNEAARKFYDRFQLGKVYYISR-GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
F + Y F+ G VYYIS T+++A K+F V NDYE+ + ++ VE+A ++ +
Sbjct: 220 FKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFDRDTVVEKAEDQND-V 278
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
PQ +FNF + L GT +D++G++++V T + K+ + KR++T+ D +
Sbjct: 279 PQIRFNFTSLGNLQSIDKGTT-IDVLGILKDVDATSQVTSKTTGKPYDKRELTLVDNSGF 337
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
+V +++W ATN D +S +VA K +KV DF G +LS L TV V PD+ EA
Sbjct: 338 SVRLTVWGNTATN-----FDTPPES-VVAFKGVKVSDFGGRTLSLLSSGTVTVDPDIEEA 391
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS-DRVSLTHITSNPSLGDEKPVFFS 466
+LK WY+++GK S + S + + + I S S FS
Sbjct: 392 HRLKGWYDAQGKSNSFTAYSSDTTGGGGGSWPTFKTISEIRDEEIPSADSFES-----FS 446
Query: 467 IKAYISLIKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
+KA + +K + + Y AC + C NKKVT + CE C+++ RYI+ C
Sbjct: 447 LKATVIHVKDN--LCYPACPNEACKNKKVTRGDLDQWHCERCERSYANPKYRYILSLNAC 504
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G+ W+S F+E + I G +ADEL ++K DD + K T+ +
Sbjct: 505 DHTGQIWLSCFDEAGQMIFGMTADELMKIKED--DDAAANEITKGATYCTWNFKCRAKLD 562
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
Y ++R R V A P+D+A E+ L + I+
Sbjct: 563 TYQEQQRTRYNVIAATPIDYATEADQLSKLIA 594
>gi|350635289|gb|EHA23651.1| hypothetical protein ASPNIDRAFT_174835 [Aspergillus niger ATCC
1015]
Length = 592
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 300/606 (49%), Gaps = 36/606 (5%)
Query: 20 DSSSDIPEIVVQVLDLK------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNK 73
D+ E VVQ + +K RY SD ++ +L + L+ V S ++
Sbjct: 6 DTKPQTREPVVQCVQIKPLPAQQSHPERYRAVFSDISNYVQTMLATQLNPMVSSKLLRKG 65
Query: 74 GLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKK 133
+RL + N + K +K LI+ EV+ E E + K ES + DE +K
Sbjct: 66 CFVRLKSFQANSV--KGKKILIILDLEVLEGLGEAEKIGDPKPLES-------KTDEDEK 116
Query: 134 DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRV 193
P + S AQ+ + A A ++P+ +++PY WTIK R
Sbjct: 117 HQPTTISSNGFYGSKISGAQVQSNTGVQSARPVLAATHATIYPIEAISPYSHKWTIKARC 176
Query: 194 TSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTL 253
TSK N+RT+ N EG +F+V L D+ G +I+AT FN+ YD FQ G VYYIS +
Sbjct: 177 TSKTNIRTWHNRNTEGRLFSVNLLDDSG-EIRATGFNDQCDMLYDVFQEGGVYYISNCRV 235
Query: 254 RVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDII 313
++A KQF + NDYE+ ++ VE+A ++T +PQ +FNF I +L + V +D+I
Sbjct: 236 QIAKKQFTNLNNDYELTFERDTVVEKAEDQTD-VPQVRFNFTSIGDL-QSVEKDTTIDVI 293
Query: 314 GVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP 373
GV++ I K+ N+ KR++ + D T +V +++W A NA
Sbjct: 294 GVLKEAMDVTQITSKTTNKPYDKRELIMVDNTGFSVRLTIWGSTAQKF------NASPES 347
Query: 374 IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL 433
++A K +KV DF G SLS L ++ V PD+ EA KLK WY+++G+ + +S S LG+
Sbjct: 348 VIAFKGVKVSDFGGRSLSLLSSGSMAVDPDIEEAHKLKGWYDAQGRDENFSSHASLLGT- 406
Query: 434 AKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQ-AMWYRAC--KTCN 489
+ +M SD+ LG E+ V+FS+KA + IK D + Y AC + CN
Sbjct: 407 ---ASSTMKSDQFKTIAQIREEQLGMSEEAVYFSLKATVIYIKQDNMSFAYPACLSEGCN 463
Query: 490 KKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
KKVT+ L G W CE C K + RYIM V D +G+ W+S F++ ++ SA++
Sbjct: 464 KKVTE-LDPGQWRCERCDKTHPQPDYRYIMHVNVSDHTGQLWLSCFDDVGRSMMDISANQ 522
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
L EL D+ + ++ R + ++R R V + P++++ E+
Sbjct: 523 LMELFQT--DEKAAGDVFQDANCRTWNFRCRAKIDHFGEQQRIRYQVSSAKPINYSHEAG 580
Query: 609 FLLEEI 614
L + I
Sbjct: 581 RLADLI 586
>gi|195330772|ref|XP_002032077.1| GM26360 [Drosophila sechellia]
gi|194121020|gb|EDW43063.1| GM26360 [Drosophila sechellia]
Length = 603
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 311/601 (51%), Gaps = 46/601 (7%)
Query: 29 VVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+Q+L +K + RY SDGK A+L S L+ +G ++ +++L Y
Sbjct: 24 VLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYV 83
Query: 83 LNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD-GPGI 138
+ + ++ LI+++ VV+P E++ KI +P E+ K+D P
Sbjct: 84 TSLVGKDGAGKRVLIISELTVVNPGAEVKSKIG----------EPVTYENAAKQDLAPKP 133
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
+ VAK + N M + MT HP+ SL+PYQ W IK RVTSK
Sbjct: 134 AATSNSKPVAKKEPIHNNNNNVVMNSSINSGMT---HPISSLSPYQNKWVIKARVTSKSG 190
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+RT+ NARGEG +F+++L DE G +I+AT F E KFYD Q+ VYYIS+ L+ ANK
Sbjct: 191 IRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANK 249
Query: 259 QFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
Q+ ++ N YEM + + V+ E ++ IP+ K+N VPI ++ N VD IG+
Sbjct: 250 QYSSLNNAYEMTFSGETVVQLCEDTDDDP-IPEIKYNLVPISDVSGMENKAA-VDTIGIC 307
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+ V S ++ N+ KRDIT+ D + ++++LW + A N + P++
Sbjct: 308 KEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHV------QPVIL 361
Query: 377 IKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
+K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G S+A++ S A+
Sbjct: 362 VKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDSVANMVS-----AR 415
Query: 436 NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT 493
G S ++ ++L + +KP +F KA + ++K + A +YRAC CNKKV
Sbjct: 416 TGGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENA-FYRACPQSDCNKKVV 474
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
D + CE C R ++ + D + W+S FNE E+++G ++ E+ E
Sbjct: 475 DEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEAL 534
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEE 613
D + + + H+ ++ + Y + R ++TV++VAP++ +K LL+E
Sbjct: 535 EN--DPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKE 592
Query: 614 I 614
+
Sbjct: 593 L 593
>gi|326931344|ref|XP_003211792.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Meleagris gallopavo]
Length = 601
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 250/448 (55%), Gaps = 22/448 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WTI RVT KG +RT+ N+RGEG +F++EL DE G +I+AT FN+
Sbjct: 167 KVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNDQ 225
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL-NENSEVEEAVNETAFIPQTK 291
A KF+ +L KVYY ++G L+ ANKQ+ V+NDYE+ NE S V ++ +P +
Sbjct: 226 ADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVV--PCDDAQHLPSVQ 283
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F+FV I +L + +VD+IG+ ++ I K+NN V KR++ + D + + VT
Sbjct: 284 FDFVSISDLENTPKDS-IVDVIGICKSYEDVTKIVVKANNREVSKRNVHLMDTSGKLVTA 342
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
+LW A E D + + P++AIK +V DF G SLS + STV+V+PD PEA KL+
Sbjct: 343 TLWGNEA-----EKFDGS-RQPVIAIKGARVSDFGGRSLSVMSSSTVVVNPDSPEAFKLR 396
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAY 470
W++SEG+ ASI S + G+ S + + + LG +K +FS
Sbjct: 397 GWFDSEGQLLECASI-----SDVRGGSASGVNTNWKTLYEAKSERLGQGDKADYFSCVGT 451
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
I ++ + M Y+AC + CNKKV D Y CE C + R +++ + D
Sbjct: 452 IVHLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDY 510
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W++ F E AE I+G SA L ELK + ++ +++ + + + ++ V + YN+E
Sbjct: 511 QWVTCFQESAEFILGQSATFLGELKEK--NEQAFEEVFQNANFNTYEFKIRVKLETYNDE 568
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + T V PV++ SK L+ I +
Sbjct: 569 SRIKATALDVKPVNYREYSKRLIASIRR 596
>gi|388581219|gb|EIM21529.1| replication factor-a protein [Wallemia sebi CBS 633.66]
Length = 599
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/629 (29%), Positives = 321/629 (51%), Gaps = 54/629 (8%)
Query: 5 VSPDAISTILS-NPSPDSSSDIPEIVVQVLDLKLTG-------NRYMFNASDGKKRLKAI 56
++ DAI I S NP+ + P VVQVL +K +RY SDGK ++A+
Sbjct: 4 LTKDAIEAINSENPAGLLAGQNP--VVQVLQVKKATASSDKAPDRYRMVLSDGKYYMQAM 61
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
L + L+S + +I+LL+YA+N + + L++ AL+++I V++
Sbjct: 62 LGTQLNSYPEQELLIKNSVIKLLNYAVNVV---QNRLLVI--------ALQIDI---VET 107
Query: 117 DESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR--V 174
I P+ D+ K +Q I D ++ P + + V
Sbjct: 108 GPLEKIGSPQNFDQTKS-----QQPQQQTEQQPQQQDIKPDVKPDIKPNFSKGPSSQAPV 162
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+P+ L+PYQ WTIK RVT K +++ + N RGEG +F+V L DE G +I+AT FNE+
Sbjct: 163 YPIEGLSPYQNKWTIKARVTQKSDIKFWSNQRGEGKLFSVNLMDETG-EIRATGFNESVD 221
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+FY+ + GKV++I++ +++A KQF +QN+YE+ ++ + +E +T+ +P K++F
Sbjct: 222 EFYNMLEEGKVFFITKARVQIAKKQFSNLQNEYEIAFDKTTHIEPCY-DTSDVPDVKYSF 280
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ L + + D++GVV I KS + KR++ + D ++++V ++LW
Sbjct: 281 TELQNLEN-LEPNAITDVLGVVTTAEEPSQIISKSTQKPYTKRELNIVDRSQQSVRLTLW 339
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+LA N Q P++A K +KV DF G SLS +G ST+ V+PD+PEA L+ WY
Sbjct: 340 GKLAENFDQV------NEPVIAFKGVKVSDFGGRSLSMVGASTLFVNPDIPEAHSLRGWY 393
Query: 415 ESEGK-------GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+ +GK S +++ G++ N +++ ++V + + N S KP +++
Sbjct: 394 DQQGKNEQFSTFNNSSSTVKPEPGTVKPNEIKTL--EQVKQSQLGLNDS---GKPDYWTG 448
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
KA ++ IK + + Y +C KK+T + + CE C+ + + RYI+ D +G
Sbjct: 449 KATVTYIKKEN-ITYPSCPNDMKKLTQDMNDKWRCEKCESSFDAPEYRYIITCNATDHTG 507
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
+ W+S FN+ + A++L + + GDD S++ +K Q +N+
Sbjct: 508 QIWLSGFNDFGLELFKMPANDLQAMVNN-GDDASFEAAVKNALGSSFNFNCRAKQDTFND 566
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R R + + V++ +E L E ISK
Sbjct: 567 NVRVRHQINRASTVNYKSEINRLCETISK 595
>gi|343887032|gb|AEM65192.1| replication protein A 70kDa DNA-binding subunit [Kryptolebias
marmoratus]
Length = 610
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 246/433 (56%), Gaps = 21/433 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WT++ RVT+K ++RT+ N+RG+G +F++E+ DE G +I+ T FN+
Sbjct: 178 KVVPIASLNPYQSKWTVRARVTNKSSIRTWSNSRGDGRLFSMEIVDESG-EIRVTAFNQE 236
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFY ++GKVYY+++G+L++ANKQ+ +V+NDYEM LN S + + +P +
Sbjct: 237 VDKFYSLIEVGKVYYVTKGSLKIANKQYTSVKNDYEMTLNGESTI-IPCEDNCDVPMVQC 295
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F+PI +L + +VD+IGV ++V + KSN E V KR + + D + + V+V
Sbjct: 296 DFIPIADLEKR-EKDAIVDVIGVCKSVDEVTRLTTKSNRE-VSKRTLNLMDMSGKMVSVI 353
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A E D +++ PIVAIK K+ DF G S+S ST++++PD+PEA K++
Sbjct: 354 LWGEEA-----EKFDGSEQ-PIVAIKGAKLSDFGGRSISASFSSTLMINPDIPEAYKIRG 407
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEKPVFFSIKAYI 471
W+++EG +G L G +L+ + + + GDE +FS A I
Sbjct: 408 WFDNEGHTV----VGQSLTERRGTGIIGGIHIWKTLSEVKAEHLGHGDEAD-YFSCTATI 462
Query: 472 SLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ + + Y+AC + CNKKV + CE C K R I+ A + D
Sbjct: 463 VYLRKENCL-YQACPSQDCNKKVIGQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQ 521
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F E AE I+G +A L +LK +++++ ++ + + V + YN+E
Sbjct: 522 WVTCFQESAEAILGQNAAYLGQLKHS--NESAFDEVFQKANFNTLIFHNRVKLETYNDES 579
Query: 590 RQRVTVRAVAPVD 602
R + V +VAPVD
Sbjct: 580 RIKAPVLSVAPVD 592
>gi|150863697|ref|XP_001382257.2| DNA replication factor A [Scheffersomyces stipitis CBS 6054]
gi|149384953|gb|ABN64228.2| DNA replication factor A [Scheffersomyces stipitis CBS 6054]
Length = 616
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 255/461 (55%), Gaps = 31/461 (6%)
Query: 167 RLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
R ++ P+ +L+PYQ NWTIK RV+ KG++RT+ NA+GEG + +V DE +I+A
Sbjct: 169 RNGFQGKITPIETLSPYQNNWTIKARVSYKGDLRTWTNAKGEGKLISVNFLDE-SDEIKA 227
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF 286
+ F + A + + GKVYYIS+ ++ +NK+F T+ + YE+ ++ ++++EE +
Sbjct: 228 SAFQDVAISAHKLLEEGKVYYISKAKVQASNKKFNTLSHPYELVMDRDTKIEECF-DVDN 286
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
+P+ FNF+ ++++ ++ ++D++G ++ V+ I KS + +R++T+ DET
Sbjct: 287 VPKMHFNFIKLNQIPN-LDPNAIIDVLGALKIVNEPYKITAKSTGKEFDRRNVTIVDETG 345
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
+ V LWN AT + I+A KS +V DF G SL+ ++L +P+ PE
Sbjct: 346 FAIDVGLWNNTATEFS------IPEGSIIAFKSCRVQDFNGRSLTLTQTGSMLPNPNTPE 399
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG---DEKPV 463
+ LK WY+++G + ++ + +G + DR ++ + SLG +++P
Sbjct: 400 SYSLKGWYDNQGVNANFNNL-----KVESSGGETKIGDRKTIAQ-AQDESLGLRSEKEPD 453
Query: 464 FFSIKAYISLIKPDQAMWYRAC----------KTCNKKVTDALGSGYWCEGCQKNDEECS 513
+F++KA IS IK D Y AC CNKK+ + + + CE C KN + +
Sbjct: 454 YFTVKASISFIKTDPNFCYPACTNEVQYNNRKSACNKKLVEQHDNSWRCEKCDKNYAQPT 513
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RYI+ + D + + W+++F EA +I+G A+EL L+ D +++ ++E +
Sbjct: 514 YRYILTCSIMDETNQIWVTLFEREALKILGKDANELIALQD---DSAAFKDYIQEKCFQE 570
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
H+ R+ Q YN++ R R A+ +D+ AE+ L E++
Sbjct: 571 HVFRIRAKQDTYNDQVRVRYQCVALYDIDYNAEAIHLSEQL 611
>gi|195572613|ref|XP_002104290.1| GD20882 [Drosophila simulans]
gi|194200217|gb|EDX13793.1| GD20882 [Drosophila simulans]
Length = 603
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 311/601 (51%), Gaps = 46/601 (7%)
Query: 29 VVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+Q+L +K + RY SDGK A+L S L+ +G ++ +++L Y
Sbjct: 24 VLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYV 83
Query: 83 LNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD-GPGI 138
+ + ++ LI+++ VV+P E++ KI +P E+ K+D P
Sbjct: 84 TSLVGKDGAGKRVLIISELTVVNPGAEVKSKIG----------EPVTYENAAKQDLAPKP 133
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
+ VAK + N M + MT HP+ SL+PYQ W IK RVTSK
Sbjct: 134 AATSNSKPVAKKEPIHNNNNNVVMNSSINSGMT---HPISSLSPYQNKWVIKARVTSKSG 190
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+RT+ NARGEG +F+++L DE G +I+AT F E KFYD Q+ VYYIS+ L+ ANK
Sbjct: 191 IRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANK 249
Query: 259 QFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
Q+ ++ N YEM + + V+ E ++ IP+ K+N VPI ++ N VD IG+
Sbjct: 250 QYSSLNNAYEMTFSGETVVQLCEDTDDDP-IPEIKYNLVPISDVSGMENKAA-VDTIGIC 307
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+ V S ++ N+ KRDIT+ D + ++++LW + A N + P++
Sbjct: 308 KEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHV------QPVIL 361
Query: 377 IKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
+K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G S+A++ S A+
Sbjct: 362 VKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDSVANMVS-----AR 415
Query: 436 NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT 493
G S ++ ++L + +KP +F KA + ++K + A +YRAC CNKKV
Sbjct: 416 TGGGSFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENA-FYRACPQSDCNKKVI 474
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
D + CE C R ++ + D + W+S FNE E+++G ++ E+ E
Sbjct: 475 DEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEAL 534
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEE 613
D + + + H+ ++ + Y + R ++TV++VAP++ +K LL+E
Sbjct: 535 EN--DPAKAEQIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLLKE 592
Query: 614 I 614
+
Sbjct: 593 L 593
>gi|57525314|ref|NP_001006221.1| replication protein A 70 kDa DNA-binding subunit [Gallus gallus]
gi|75571284|sp|Q5ZJJ2.1|RFA1_CHICK RecName: Full=Replication protein A 70 kDa DNA-binding subunit;
Short=RP-A p70; AltName: Full=Replication factor A
protein 1; Short=RF-A protein 1
gi|53133544|emb|CAG32101.1| hypothetical protein RCJMB04_17l6 [Gallus gallus]
Length = 614
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 249/447 (55%), Gaps = 20/447 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WTI RVT KG +RT+ N+RGEG +F++EL DE G +I+AT FN+
Sbjct: 180 KVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNDQ 238
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A KF+ +L KVYY ++G L+ ANKQ+ V+NDYE+ N + V ++ +P +F
Sbjct: 239 ADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFNNETSV-VPCDDAQHLPSVQF 297
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+FV I +L + +VD+IG+ ++ I K++N V KR++ + D + + VT +
Sbjct: 298 DFVSISDLENTPKDS-IVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTAT 356
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW A E D + + P++AIK +V DF G SLS L STV+V+PD PEA KL+
Sbjct: 357 LWGNEA-----EKFDGS-RQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRG 410
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYI 471
W++SEG+ ASI S + G+ S + + + LG +K +FS I
Sbjct: 411 WFDSEGQLLECASI-----SDVRGGSASGVNTNWKTLYEAKSERLGQGDKADYFSCVGTI 465
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ + M Y+AC + CNKKV D Y CE C + R +++ + D
Sbjct: 466 VHLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQ 524
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F E AE I+G SA L ELK + ++ +++ + + + ++ V + YN+E
Sbjct: 525 WVTCFQESAEFILGQSATFLGELKDK--NEQAFEEVFQNANFNTYEFKIRVKLETYNDES 582
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISK 616
R + T V PV++ SK L+ I +
Sbjct: 583 RIKATALDVKPVNYREYSKRLIASIRR 609
>gi|224076356|ref|XP_002197483.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Taeniopygia guttata]
gi|449479760|ref|XP_004177049.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
2 [Taeniopygia guttata]
Length = 613
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 249/447 (55%), Gaps = 20/447 (4%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WTI RVT KG +RT+ N+RGEG +F++EL DE G +I+AT FN+
Sbjct: 179 KVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNDQ 237
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL-NENSEVEEAVNETAFIPQTK 291
A KF+ +L KVYY ++G L+ ANKQ+ V+NDYE+ NE S V ++ +P +
Sbjct: 238 ADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVV--PCDDAQHLPSVQ 295
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F+FV I +L + +VD+IG+ ++ I K+NN V KR++ + D + + VT
Sbjct: 296 FDFVSISDLENTPKDS-IVDVIGICKSYEDVTKIVVKANNREVSKRNVHLMDTSGKLVTA 354
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
+LW A E D + + P++AIK +V DF G SLS L STV+++PD PEA KL+
Sbjct: 355 TLWGNEA-----EQFDGS-RQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLR 408
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
W++SEG+ ASI G A GA + + + N GD K +FS I
Sbjct: 409 GWFDSEGQLLECASISDVRGGPAA-GANTNW--KTLFEAKAENLGQGD-KADYFSCVGTI 464
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ + M Y+AC + CNKKV D Y CE C + R +++ + D
Sbjct: 465 VHLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQ 523
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
W++ F + AE I+G +A L ELK + ++ +++ + + + R+ V + YN+E
Sbjct: 524 WVTCFQDTAEIILGQNAAFLGELKEK--NEQAFEEVFQNANFNTYEFRIRVKLETYNDES 581
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISK 616
R + T V PV++ SK L+ I +
Sbjct: 582 RIKATAMDVKPVNYREYSKRLIANIRR 608
>gi|259483725|tpe|CBF79351.1| TPA: subunit of heterotrimeric Replication Factor (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 603
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 307/625 (49%), Gaps = 50/625 (8%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN---RYMFNASDGKKRLKAILPSNL 61
VS A+S I P S I + VQV L N RY SD ++ +L
Sbjct: 8 VSVGALSGIFDATKPQISEPIVQ-CVQVKPLPPQANNQERYRVVFSDISNYVQTMLAIQA 66
Query: 62 SSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGI 121
+ V G ++ +RL + N + K +K LIV EV+ E E E K ES
Sbjct: 67 NHFVTDGLLRKGCFVRLKQFQANSV--KGKKILIVLDLEVLKELGEAEKLGEPKPLES-- 122
Query: 122 IFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTR--------R 173
K E+E K P+ ++ + + QN ++R TR
Sbjct: 123 ----KAEEEEK---------PQPTTISSNGFYGAKAQNAPSQISSRAQHTRPMQGSAPAT 169
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ +++PY WTIK R TSK ++T+ G+G +F+V L D+ G +I+AT FNE
Sbjct: 170 IYPIEAISPYAHKWTIKARCTSKSPIKTFHGRSGDGTLFSVNLLDDSG-EIRATGFNEQC 228
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
YD FQ G+VYYIS +++A KQF + NDYE+ ++ VE+A E +PQ +F
Sbjct: 229 SALYDLFQEGEVYYISSPCRVQIAKKQFTNLNNDYELTFERDTLVEKA-EEQNDVPQVRF 287
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I +L + V +D+IGV+++V T I K+ + KR++T+ D T +V ++
Sbjct: 288 NFTTIGDL-QSVEKDTTIDVIGVLKDVGETTQIVSKTTKKPYDKRELTLVDNTGFSVRLT 346
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W A N A +VA K +KV DF G SLS L +V V PD+ EA +LK
Sbjct: 347 IWGTTAMNFA------ASPESVVAFKGVKVSDFGGKSLSLLSSGSVTVDPDIEEAHRLKG 400
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYI 471
WY+++G+ + AS S +G+++ + D++ LG E+P +F+++A +
Sbjct: 401 WYDAQGRNENFASHASSVGTMS-----ATKRDQLKTIAQVREEQLGMSEEPSYFTLRATV 455
Query: 472 SLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
IK D + Y AC + CNKKVT+ + CE C K RYIM+ V D +G+
Sbjct: 456 VYIKQDN-LCYPACLSEGCNKKVTEVDPGQWRCERCDKTHPRAEYRYIMLVNVSDHTGQL 514
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
+++ F++ ++G SA++L EL D + ++ T Y +++
Sbjct: 515 YLNCFDDVGRLLLGMSANQLMELPQ--NDGKALGNVIQNATCRTWTFGCRAKIDHYGDQQ 572
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEI 614
R R V PV+++ E+ L + I
Sbjct: 573 RIRYQVSYAKPVNYSEEASRLADII 597
>gi|254585755|ref|XP_002498445.1| ZYRO0G10428p [Zygosaccharomyces rouxii]
gi|238941339|emb|CAR29512.1| ZYRO0G10428p [Zygosaccharomyces rouxii]
Length = 615
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 254/452 (56%), Gaps = 18/452 (3%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+R + + L+PYQ WTIK RV+ KG+++T+ N RG+G + N+ D G +I+ T FN
Sbjct: 176 SRPIFAIEQLSPYQNIWTIKARVSYKGDIKTWHNQRGDGKLLNLNFLDTSG-EIRGTAFN 234
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ A KF + Q GKVY++S+ L+ A QF + + YE+ L+ ++ VEE ++ + +P+T
Sbjct: 235 DNATKFNEILQEGKVYFLSKARLQPAKPQFSNLPHPYELMLDRDTVVEECLDASD-VPKT 293
Query: 291 KFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
F+F+ ++ + + N T VD++G++Q V+P + ++ +RDIT+ D+++ ++
Sbjct: 294 HFSFIKLNTIQNQEANST--VDVLGIIQTVNPHFELISRAGKRF-DRRDITIVDDSEYSI 350
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
V LWN+ A + N + +VAIKS++V DF G SLS ST++ +P++PEA
Sbjct: 351 AVGLWNQQAVDF------NLPEGSVVAIKSVRVTDFGGKSLSMGFTSTMIPNPEIPEAYS 404
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMY-SDRVSLTHITSNPSLGDEKPVFFSIK 468
LK W+++ G+ S+ + Y S+R ++ + +EK FFSIK
Sbjct: 405 LKGWFDNTGRNLQYHSLKEEVNETNSTTNLVKYISERTTIATAQAQNLGRNEKGDFFSIK 464
Query: 469 AYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
A +S +K D Y AC + CNKKV + + CE C N RY++ V D +
Sbjct: 465 AAVSFLKVDN-FAYPACLNENCNKKVIEQPDQTWRCEKCDTNHPSPDWRYLLTISVLDET 523
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G+ W+++FN++A++++ A EL LK D ++ + + + R+ + YN
Sbjct: 524 GQLWLTLFNDQAKQLLKVEASELVLLKE--SDPTAFSKITQSLQMNQYSFRIRAREDNYN 581
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
N+ R R TV + +++ AE+ FL E++++ +
Sbjct: 582 NQSRIRYTVSNLHNINYKAEADFLAEQLTQSL 613
>gi|190345993|gb|EDK37976.2| hypothetical protein PGUG_02074 [Meyerozyma guilliermondii ATCC
6260]
Length = 469
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 242/460 (52%), Gaps = 37/460 (8%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+P+ SL+PYQ NW IK RV+ KG++R + NARGEG +FNV DE +I+AT FN+ A
Sbjct: 24 FNPIESLSPYQNNWRIKARVSFKGDIRKWSNARGEGKLFNVNFLDE-SDEIRATAFNDVA 82
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+FY+ + GKVY + R ++ A QF + + YE+ L++++ + E +T+ +P+ FN
Sbjct: 83 EQFYNTLEEGKVYTVERARIQQAKPQFSHLTHPYELALDKDTVITECF-DTSDVPKLHFN 141
Query: 294 FVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F +D++ VN +VD+IGV++ +P I KS + +R+IT+ D++ + +
Sbjct: 142 FTKLDKIQAAEVNA--VVDVIGVLKTANPVFQITAKSTGKAFDRRNITIVDDSNFAIDIG 199
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LWN+ A L N + ++A K KV DF G SL+ +++V+PD PEA +LK
Sbjct: 200 LWNQTA------LEFNTSEGSVIAFKGCKVQDFGGRSLTLTHSGSMVVNPDTPEAYQLKG 253
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYI 471
WY+++G + S+ + G Y +LG EKP FFS+KA I
Sbjct: 254 WYDNQGMNENFKSLK------VEAGPNQNYIKNRKTILAAQEDNLGMHEKPDFFSVKATI 307
Query: 472 SLIKPDQAMWYRAC---------------KTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
S K D Y AC TCN+KV + G+ CE C E RY
Sbjct: 308 SYFKTDN-FSYPACSNTVPGNSQAPGQQENTCNRKVLEQ-SDGWRCEKCNITLPEPLHRY 365
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ--LGDDNSYQMKLKEVTWVPH 574
I+ + D +G+ W ++F++EA ++ G SA +L LK + + + N + ++ +T
Sbjct: 366 ILNCSITDETGQLWTTLFDQEARKLFGMSAGDLINLKEKQDMNESNEFADLMESITMKEF 425
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
R+ Q YN R R ++ VDF AE L +E+
Sbjct: 426 NFRLRARQDSYNGNVRIRYQTMSLFDVDFVAECDELCQEL 465
>gi|255954847|ref|XP_002568176.1| Pc21g11440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589887|emb|CAP96041.1| Pc21g11440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 314/625 (50%), Gaps = 53/625 (8%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILP 58
V+ A+S I P + E +VQ + +K RY SD + ++ +L
Sbjct: 9 VTIGALSAIFDETKPQ----VREPIVQCVQIKALPAQPNQPERYRAVFSDIENYVQTMLA 64
Query: 59 SNLSSEVIS-GNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSD 117
+ +S+ V++ G+++ +RL + N + K +K LI+ EV+ E + E K
Sbjct: 65 TRMSNSVVTDGSLRKGSFVRLKSFQSNSV--KGKKILIILDLEVLKELGEADKIGEPKPL 122
Query: 118 ESGIIFKPKQEDEVKK----DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR 173
E+ KP +E EV + G G +M A Q R Q + ++ A
Sbjct: 123 EA----KP-EEGEVGQPTTISGNGFY---GSKMEGAHAQQNRRAQPMSAPMSSSSAHAT- 173
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ +++PY WT+K R TSK N++T+ N GEG +F+V L D+ G +I+AT FNE
Sbjct: 174 IYPIEAISPYSNKWTMKARCTSKSNIKTWHNKNGEGKLFSVNLLDDSG-EIRATGFNEQC 232
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
Y+ FQ G VYYIS +++A KQF + NDYE+ ++ VE+A E +PQ +F
Sbjct: 233 DMLYELFQEGSVYYISSPCRVQIAKKQFTNLNNDYELTFERDTIVEKA-EEQNDVPQIRF 291
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF + +L + V +D+IGV+++V T I KS + KR++T+ D T +V ++
Sbjct: 292 NFTTVADL-QTVEKDTTIDVIGVLKDVGETSQITSKSTGKPYDKRELTLVDNTGFSVRLT 350
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W A N + +VA K +KV DF G SLS L ++ V PD+ EA +L+
Sbjct: 351 IWGASANNF------SVAPESVVAFKGVKVSDFGGRSLSLLSSGSMTVDPDIGEAHRLRG 404
Query: 413 WYESEGKG---TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIK 468
WY+++G+ TS AS+ + S AK DR LG E P +FS+K
Sbjct: 405 WYDAQGRSENFTSHASLSNATNSTAK-------MDRFKTVAQVREEQLGMSETPDYFSLK 457
Query: 469 AYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDG 525
A ++ IK D Y AC + CNKKVT+ L G W CE C K + RY+M V D
Sbjct: 458 ATVTYIKQDSTWCYPACLSENCNKKVTE-LDPGQWRCEKCDKTHPKPEYRYVMPISVSDH 516
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G+ W+S F+E I+G ADEL +L+ D +++ + R +
Sbjct: 517 TGQLWLSCFDETGRNIMGKPADELMQLRED--DPSAFGEVFQGANCQTWSFRCKANVDNF 574
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFL 610
+++R R V + ++++ E+ L
Sbjct: 575 GDQQRVRYQVSSSQAINYSDEASRL 599
>gi|449015647|dbj|BAM79049.1| probable replication protein A [Cyanidioschyzon merolae strain 10D]
Length = 663
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 303/619 (48%), Gaps = 47/619 (7%)
Query: 29 VVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPT 88
V Q +G+RY SDG+ L +L + L+S V+SG++ ++RL+DY N++
Sbjct: 37 VAQQAQATTSGDRYRVVLSDGEHLLHCVLMAQLNSFVLSGDLDKGSIVRLVDYQPNKV-- 94
Query: 89 KSEKYLIVTKCEVV---SPAL----EMEIKIEVKSDESGIIFKPKQEDEVKKD---GPGI 138
+ I+ E++ +P + + + + S F + +K G+
Sbjct: 95 QDRVVAIIINLEILERNAPTVGNPKAFDPRASTDTALSSHSFDDDSTETARKRQAVSAGV 154
Query: 139 VLKPKQEMVA------------KSAAQ--ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQ 184
KP V KSAA ++R G + LA + + NPYQ
Sbjct: 155 EHKPPPPRVTPGAPPVSVPPPVKSAAAGPVVRFDQGLGSSVETLAPPGGYTKISAANPYQ 214
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
N I+ RV KG +RTY NA+GEG +F+ E+ DE G ++ T F E A + + R +L
Sbjct: 215 NNVIIRGRVVQKGELRTYSNAKGEGKLFSFEIADETGN-MRVTAFREKALEAHQRIELNG 273
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
+Y I+ +L+ AN QF + +EM L++NS + + ++ I + F+FV I +L
Sbjct: 274 IYSIAGASLKPANAQFNHTGHSFEMILDQNSVITQLPDDN-MIQRVSFDFVKIRDLMDVP 332
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
G ++VD+IG+ ++ I K+ V KR++ + D+T +V +++W E A +
Sbjct: 333 VG-KVVDVIGIALDIGEVGEISSKTTGLPVAKREVKLIDDTGCSVALTIWGERA----RS 387
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
L N D P++ +KS K GDF G+SLST S V V+P++ EA +L+ W++SEG G
Sbjct: 388 LFSNEDDRPVLLVKSAKRGDFNGVSLSTTPSSHVEVNPNIREAFELRGWFDSEGHGAEFQ 447
Query: 425 SI-GSGLG-----SLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQ 478
+ G+ LG S +N R ++ +V HI +P +++++A IS IK D+
Sbjct: 448 DLGGTPLGGARTESRIRNSERKTFA-QVQSEHIGEDPHSA-PGASYYTVRATISHIKQDE 505
Query: 479 AM--WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNE 536
WY +C C KKV + Y CE C K + RYI + D +G W++ ++E
Sbjct: 506 ERPPWYLSCPDCKKKVIEESPDMYRCERCDKLVKPTP-RYIFSIQAMDATGSHWLNCYDE 564
Query: 537 EAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
I G SA+EL +K D YQ L++ + L RV V Y +E R V
Sbjct: 565 VGPIIFGGYSAEELKRIKET--DSEEYQRILEQAHFGEFLFRVRVRSDTYQDEMTFRHMV 622
Query: 596 RAVAPVDFAAESKFLLEEI 614
+++ +E K L EI
Sbjct: 623 VGAEKINYESEMKMLESEI 641
>gi|358367561|dbj|GAA84179.1| replication factor A 1, Rfa1 [Aspergillus kawachii IFO 4308]
Length = 606
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 305/617 (49%), Gaps = 32/617 (5%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVV--QVLDLKLTGNRYMFNASDGKKRLKAILPSNLS 62
VS A+S I + P + I + V Q+ + RY SD ++ +L + L+
Sbjct: 9 VSVGALSAIFDDTKPQTREPIVQCVQIKQLPSQQSHPERYRAVFSDISNYVQTMLATQLN 68
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V S ++ +RL + N + K +K LI+ EV+ E E K ES
Sbjct: 69 PMVSSELLRKGCFVRLKSFQANSV--KGKKILIILDLEVLEGLGVAEKIGEPKPLES--- 123
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
+ DE K P + S AQ+ + A A ++P+ +++P
Sbjct: 124 ----KTDEDDKHQPTTISSNGFYGSKMSGAQVQSNTGVQSARPVLAAAHATIYPIEAISP 179
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y WTIK R TSK N++T+ N EG +F+V L D+ G +I+AT FN+ YD FQ
Sbjct: 180 YSHKWTIKARCTSKTNIKTWHNRNTEGRLFSVNLLDDSG-EIRATGFNDQCDMLYDVFQE 238
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
G VYYIS +++A KQF + NDYE+ ++ VE+A +++ +PQ +FNF I +L +
Sbjct: 239 GGVYYISNCRVQIAKKQFTNLNNDYELTFERDTVVEKAEDQSD-VPQVRFNFTSIGDL-Q 296
Query: 303 YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
V +D+IGV++ I K+ N+ KR++ + D T +V +++W A N
Sbjct: 297 SVEKDTTIDVIGVLKEDMGVSQITSKTTNKPYNKRELVMVDNTGFSVRLTIWGTTAQNF- 355
Query: 363 QELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
NA ++A K +KV DF G SLS L ++ V PD+ EA KLK WY+++G+ +
Sbjct: 356 -----NALPESVIAFKGVKVSDFGGRSLSLLSSGSMAVDPDIEEAHKLKGWYDAQGRAEN 410
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQ-AM 480
+S S LG+ + +M SD+ LG E+ V+FS+KA + IK D +
Sbjct: 411 FSSHASLLGA----ASSTMKSDQFKTIAQIREEQLGMSEEAVYFSLKATVIYIKQDNMSF 466
Query: 481 WYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE 537
Y AC + CNKKVT+ L G W CE C K RYIM V D +G+ W+S F++
Sbjct: 467 AYPACLSEKCNKKVTE-LDPGQWRCERCDKTHPRPDYRYIMHVNVSDHTGQLWLSCFDDV 525
Query: 538 AERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRA 597
+ ++ SA++L EL D+ + ++ R + ++R R V +
Sbjct: 526 GKSMMDMSANQLMELFQT--DEKAAGDAFQDANCRTWNFRCRAKIDHFGEQQRIRYQVSS 583
Query: 598 VAPVDFAAESKFLLEEI 614
P++++ E+ L + I
Sbjct: 584 ANPINYSQEASRLADLI 600
>gi|119188411|ref|XP_001244812.1| replication factor-A protein 1 [Coccidioides immitis RS]
Length = 605
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 191/631 (30%), Positives = 306/631 (48%), Gaps = 54/631 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLK 54
M ++ A+S I D+ + + +VQ L +KL +RY SD ++
Sbjct: 1 MANNITVGALSAIFD----DTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQ 56
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
+L S+L+ V +G ++ ++L + N + K ++ LIV +V+ E E +
Sbjct: 57 TMLASSLNDLVNNGALRRGCFVQLKSFQANFV--KGKRILIVLDLDVLEDLGECERIGDP 114
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVA--KSAAQILRDQNGN---MAPAARLA 169
K E+ + EV+K P + V S AQ R Q MAP
Sbjct: 115 KPLETKVA-------EVEKPTPTAISSDGFYGVVSEHSVAQPQRHQRATVPTMAPTHA-- 165
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
++P+ +L+PY WTIK R T+K ++ + N GEG +F+V L D+ G +I+AT F
Sbjct: 166 ---NIYPIEALSPYSHKWTIKARCTNKSAIKKWYNRNGEGRLFSVNLLDDSG-EIRATAF 221
Query: 230 NEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
E Y F+ G VYYIS +++A ++F V NDYE+ ++ +E A + +P
Sbjct: 222 KEQCDLLYPLFEEGSVYYISSPCRVQMAKREFSNVNNDYELTFERDTVIERAEDHED-VP 280
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q +FNF I L GT +D++GV++ V P + KS + KR++ + D+T +
Sbjct: 281 QMRFNFTSIGHLHSVEKGTT-IDVLGVLKTVEPVAEVPSKSTGKRYTKRELMLVDDTGYS 339
Query: 349 VTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V +++W +AT+ D P +VA K +KV DF G SLS L T+ PD+ E
Sbjct: 340 VPLTIWGGMATSF--------DVMPDSVVAFKGVKVSDFGGRSLSLLNSGTITSDPDIEE 391
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARS-MYSDRVSLTHITSNPSLGDEKPVFF 465
A KLK WY+++GK A+ + G R +Y ++ + N EKP +F
Sbjct: 392 AHKLKGWYDAQGKFDQFATHALSENAAISTGTRQDIYK---AIVEVRDNQLGMTEKPDYF 448
Query: 466 SIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
S++A + IK D + Y AC + CNKKV + CE C+K+ RYI+ A V
Sbjct: 449 SLRATVVFIKQD-TICYPACVQERCNKKVVQVDPEQWLCEHCEKSSLRPEYRYILSANVS 507
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G+ W++ F+E I+G A+ L ELK DD + + T L+
Sbjct: 508 DHTGQLWLNCFDEVGRAIMGMPANVLMELKE--SDDKAASEAILHATCQMWNLKCKAKLD 565
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ N+ R +V +P++F+ ES L+ I
Sbjct: 566 NFQNQPRYQVL--GASPINFSHESSRLVSLI 594
>gi|189241203|ref|XP_970077.2| PREDICTED: similar to replication factor a 1, rfa1 [Tribolium
castaneum]
Length = 585
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 244/449 (54%), Gaps = 24/449 (5%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
++ + P+ SLNP+ NW I+ RV +K N+R + NA+GEG +F+++L D+ G +I+ T F
Sbjct: 151 SKTISPIASLNPFHNNWIIRARVVNKTNVRNWSNAKGEGKLFSIDLVDKGG-EIRCTAFR 209
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ KF+DR ++ KVYYIS+ L+ N+QF ++++ +EM + +E + ++ IPQ
Sbjct: 210 DLVDKFFDRLEVDKVYYISKCQLQPINRQFCSLKHQFEMYFTPETIIEPSYDDNEIIPQI 269
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+NF ID++ GT +VD+IGV + +S S KS N + KR + + D+TK ++
Sbjct: 270 TYNFTTIDKVAVMEAGT-IVDVIGVCKTISELQSFVAKSTNREMQKRQLVLVDQTKTAIS 328
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKK 409
++LW A + +P++ +K+ K+ +F+G S++ +G S + + P++ E
Sbjct: 329 LNLWGSQAESFA------VTGNPVILVKNAKIYEFRGAKSITLMGTSLLKIDPEIRETHI 382
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
L+ WY SEG + ++ +NG Y LT + EKP+++
Sbjct: 383 LRRWYHSEGNQVEITNVSH------RNG----YGSTPWLTFKEARQQTISEKPLYYQTFG 432
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
I L++ D+A+ Y++C C KKV D Y CE C + R ++ V D S
Sbjct: 433 TILLVRLDRAV-YKSCPNADCQKKVLDLENGMYRCEKCNREFPNFKYRLLVSMNVADSSS 491
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W+++F+ EAE+I+G +A E+ EL D ++ +E + + + + YN+
Sbjct: 492 SQWVTVFSSEAEKILGKTAQEIGELMET--DPDTVANMFEEAQFKQFIFKCRAKIETYND 549
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E++ + V VAPVD+ + +L++ I K
Sbjct: 550 EQKMKTVVVTVAPVDYEEYNAYLVDRIEK 578
>gi|327301885|ref|XP_003235635.1| replication factor A 1 [Trichophyton rubrum CBS 118892]
gi|326462987|gb|EGD88440.1| replication factor A 1 [Trichophyton rubrum CBS 118892]
Length = 598
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 305/607 (50%), Gaps = 49/607 (8%)
Query: 25 IPEIVVQVLDLKLT----GNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLD 80
+P+ ++Q L +K +RY SD ++ +LP+ L+S V G ++ +RL +
Sbjct: 21 VPQPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTMLPTQLNSYVTDGILRRGSFVRLTN 80
Query: 81 YALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVL 140
+ ++ + K + LI+ EV+S E E + K E PK DE+ G L
Sbjct: 81 FQVSVV--KGKHLLIIMGLEVLSALGEAERIGDPKPLE------PKSGDEMG--GQSTTL 130
Query: 141 K-------PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGN-WTIKVR 192
P+ + I R + M A + + +L+P+ N WTIK R
Sbjct: 131 SSNEFYNAPQPHNPPQHFQNIQRSRPSGMTSNAN------IFSIEALSPFANNKWTIKAR 184
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR-G 251
T K N++T+KN GEG +F+V L D+ G +I+AT F + Y F+ G VYYIS
Sbjct: 185 CTHKSNIKTWKNTFGEGKLFSVNLLDDSG-EIRATAFKDQCDLLYPIFEEGAVYYISSPC 243
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
T+++A K+F V NDYE+ + ++ VE+A ++ +PQ +FNF + +L GT +D
Sbjct: 244 TVKMAKKEFSNVNNDYELTFDRDTVVEKAEDQND-VPQIRFNFTSLGDLQSIDKGTT-ID 301
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++G++++V T + K+ + KR++T+ D + +V +++W ATN D +
Sbjct: 302 VLGILKDVDATSQVTSKTTGKPYDKRELTLVDNSGFSVRLTVWGNTATN-----FDTPPE 356
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLG 431
S +VA K +KV DF G +LS L TV V PD+ EA +LK WY+++GK S +
Sbjct: 357 S-VVAFKGVKVSDFGGRTLSLLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSF----TAYS 411
Query: 432 SLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTC- 488
S A G + +++ I + FS+KA + +K + + Y AC + C
Sbjct: 412 SGATGGGGGSWPTFKTISEIRDEEIPSADSFESFSLKATVIHVKDN--LCYPACPNEACK 469
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
NKKVT + CE C+++ RYI+ CD +G+ W+S F+E + I G +ADE
Sbjct: 470 NKKVTRGDLDQWHCERCERSYANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADE 529
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
L ++K + DD + K T+ + Y ++R R V A P+D+A E+
Sbjct: 530 LMKIKEE--DDAAANEITKGATYCTWNFKCRAKLDTYQEQQRTRYNVYAATPIDYATEAD 587
Query: 609 FLLEEIS 615
L + I+
Sbjct: 588 QLSKLIA 594
>gi|302836243|ref|XP_002949682.1| hypothetical protein VOLCADRAFT_104448 [Volvox carteri f.
nagariensis]
gi|300265041|gb|EFJ49234.1| hypothetical protein VOLCADRAFT_104448 [Volvox carteri f.
nagariensis]
Length = 900
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 250/469 (53%), Gaps = 29/469 (6%)
Query: 166 ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
AR R+ P+ +LNPY W I+ RVTSKG +R + N +GEG VF+ +L D G I+
Sbjct: 237 ARDEAPPRIMPISALNPYIARWAIRGRVTSKGELRRWTNVKGEGKVFSFDLLDLAGGDIR 296
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV--NE 283
AT F A KF++ ++G +Y IS+ +L QF +DYE+ L+ NS VE E
Sbjct: 297 ATAFGAEADKFFETIEVGAIYQISKASLTQKKPQFNPTSHDYEIRLDRNSLVERVPEDKE 356
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
T+ IP FNF I +L G+ +VDIIG+V+ SI R++ E KR + V D
Sbjct: 357 TSQIPSISFNFRRIADLETAEAGS-MVDIIGLVETCDAWQSITRRTGEETQ-KRSMVVRD 414
Query: 344 ETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS 401
E+ R++ V+LW L N G ++ + + P+ A K+L+VGDF G +LST+G S + +
Sbjct: 415 ESGRSIEVTLWGPLVNNPGDQIEQMVRSGARPVFAAKALRVGDFNGKTLSTIGSSVLRID 474
Query: 402 P-DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
P DLP A++L+SWY+ G+ ++ S L S G +DR + LG
Sbjct: 475 PMDLPAAQRLRSWYDGGGRSQAVNS----LSSAGMGGGAGGKADRRTTFSAIKGEHLGTS 530
Query: 461 -KPVFFSIKAYISLIKPD------QAMWYRAC------KTCNKKVTDALGSGYW-CEGCQ 506
KP + ++ A + ++K D A+ Y +C + C KK+ D +G G W CE C
Sbjct: 531 GKPDWITVSAVVDMVKTDSQGGGPSAVVYPSCPHDFNGRPCQKKMMD-IGGGNWNCERCN 589
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL 566
+ E + RY++ CD + + +++ F + + I G +A E+ +L+++ + +
Sbjct: 590 YSTENPAWRYLVSMSACDHTSKQYLTAFGDAGDAIFGRTAAEVRQLEAE--NTQEFDRLT 647
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTV-RAVAPVDFAAESKFLLEEI 614
+ + + + R+ VA+ YN+E R +V++ R DF E +L+ I
Sbjct: 648 ESIRFTSFIFRLKVAEDHYNDEARIKVSIYRLERLTDFVKEGNLMLQYI 696
>gi|307184253|gb|EFN70726.1| Replication protein A 70 kDa DNA-binding subunit [Camponotus
floridanus]
Length = 607
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 174/612 (28%), Positives = 308/612 (50%), Gaps = 46/612 (7%)
Query: 24 DIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKA--ILPSNLSSEVISGNIQNKGL 75
DI + V+Q+L K T +RY SDG RL + +L ++L+ + + ++ +
Sbjct: 17 DIKKPVLQILGYKKIPSSINTDDRYRLLLSDGD-RLNSFTMLVTHLNHLITNNSLTQYTV 75
Query: 76 IRLLDYALNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKK 133
++L+YAL + K + +++ EV+ P E+ KI ++ +++ +
Sbjct: 76 CKILNYALTSVNNNGKERRIMLILDIEVLFPGNEVGYKIGNPTN---------TDNKSRL 126
Query: 134 DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH--PLVSLNPYQGNWTIKV 191
+ S + I ++ + + + + P+ L+PYQ W IK
Sbjct: 127 EYVTTSNTSTATSCQTSNSTIEKNILNHDTSSTSFYINHSISTIPIAILSPYQNRWIIKA 186
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RVT+K ++T+ N+RGEG +F+++L DE G +I+ FN+ FY +G VYYISR
Sbjct: 187 RVTNKSAIKTWSNSRGEGKLFSMDLIDESG-EIRCVAFNQQCDNFYHLIDVGNVYYISRC 245
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
L+ ANKQF T++NDYEM + +++ + IP +F+F PI ++ L+D
Sbjct: 246 KLKTANKQFSTLKNDYEMTITDDTMISPCHKNCDNIPMQQFDFCPISQV-ESKEQNNLID 304
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD-NAD 370
++GVV + I +++ + + KRDI + D++ + V+LW G+E D +
Sbjct: 305 VLGVVTTFNDIQHITQRTTGKELIKRDINLIDDSGAMICVALW-------GKEAEDFDGF 357
Query: 371 KSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+PI+AIK +VG+F G +LS + S + PD+PEA KL+ WY + ++ +
Sbjct: 358 NNPILAIKGARVGEFNGGKNLSLINSSVLKKDPDIPEAHKLRKWYAAANHLENVKFLSRS 417
Query: 430 LGSLAKNGARSMYSDR-VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--K 486
G + +Y+ R ++ + + D + + A I+LI+ + ++ Y+AC
Sbjct: 418 SGG---DFNTPLYTFREMTEAQLGGKLNFTD----LYKVVATINLIRVENSV-YKACPID 469
Query: 487 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
+C KK+ D + CE C K+ R + + D +G W+ FNE AE+I+G SA
Sbjct: 470 SCRKKLIDQSTGIFRCEKCNKDYPNFVYRLLANMNIADATGNRWVIAFNEVAEKILGISA 529
Query: 547 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
EL ELK DD Y KL E + + + V + + +E R + T +V P+++
Sbjct: 530 QELGELKENDNDD--YMEKLNEANFKRFIFSLRVKSEVFQDEMRIKHTCTSVVPLNYKTH 587
Query: 607 SKFLLEEISKKV 618
+L++E+SK V
Sbjct: 588 LTYLIDEVSKVV 599
>gi|198452404|ref|XP_001358758.2| GA21928 [Drosophila pseudoobscura pseudoobscura]
gi|198131919|gb|EAL27901.2| GA21928 [Drosophila pseudoobscura pseudoobscura]
Length = 603
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 181/624 (29%), Positives = 316/624 (50%), Gaps = 49/624 (7%)
Query: 4 TVSPDAISTILSNPSPDSSSDIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAIL 57
T+S I+ I++ D+ + V+Q+L +K RY SDGK A+L
Sbjct: 5 TLSSGVIARIMN------GDDVVKPVLQILAIKKINSNADAERYRILISDGKYFNSYAML 58
Query: 58 PSNLSSEVISGNIQNKGLIRLLDYALNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVK 115
S L+ G + +++L Y + + ++ LI+++ V++ E++ KI
Sbjct: 59 ASQLNEMQHKGQLDEFTIVQLDKYVTSMVGKDGAGKRVLIISELTVLNAGAEVKEKI--- 115
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
E ++D+V K P +V PK+E V +S + N + A + H
Sbjct: 116 -GEPVTYENAAKQDKVAKAAPPVV--PKKE-VTQSNNNNNNNITLNASIGAGM-----TH 166
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ SL+PYQ W IK RVTSK +RT+ N RGEG +F+++L DE G +I+AT F E K
Sbjct: 167 PISSLSPYQNKWVIKARVTSKTGIRTWSNPRGEGKLFSMDLMDESG-EIRATAFKEQCDK 225
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFN 293
++D Q+ VY+ S+ L+ ANKQF + N YEM + V+ E ++ A IP K+N
Sbjct: 226 YFDMIQVDSVYFFSKCQLKPANKQFSQLNNAYEMTFTGETAVQLCEDADDGA-IPDIKYN 284
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
VPI E+ N VD IG+ + V + ++ N+ KRD+T+ D + ++++L
Sbjct: 285 LVPISEVSGMENKAA-VDTIGICKEVGELQAFTSRTTNKEFKKRDLTLVDMSNSAISLTL 343
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKS 412
W + A N + P++ +K ++ +F G +LG +++ ++PD+PEA KL+
Sbjct: 344 WGDDAVNFDGHV------QPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 397
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
W+++ G G ++A++ S A+ G S +D ++L + +KP +F KA +
Sbjct: 398 WFDN-GGGDNVANMVS-----ARTGGGSFSTDWMTLKDARARNLGSGDKPDYFQCKAVVH 451
Query: 473 LIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
++K + A +YRAC CNKKV D Y CE C R ++ V D + W
Sbjct: 452 IVKQENA-FYRACPQADCNKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSVGDWTSNRW 510
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
++ FNE E+++ ++ E+ E D + + + H+ ++ + Y + R
Sbjct: 511 VTCFNETGEQLLKHTSQEIGEALEN--DPTKAEEIFSALNFTSHIFKLRCKNEVYGDMTR 568
Query: 591 QRVTVRAVAPVDFAAESKFLLEEI 614
++TV++V P++ ++ LL+E+
Sbjct: 569 NKLTVQSVGPLNHKEYNRHLLKEL 592
>gi|195499032|ref|XP_002096775.1| GE24866 [Drosophila yakuba]
gi|194182876|gb|EDW96487.1| GE24866 [Drosophila yakuba]
Length = 603
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/602 (30%), Positives = 312/602 (51%), Gaps = 48/602 (7%)
Query: 29 VVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+Q+L +K RY SDGK A+L S L+ +G ++ +++L Y
Sbjct: 24 VLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYV 83
Query: 83 LNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD-GPGI 138
+ + ++ LI+++ VV+P E++ KI +P E+ K+D P
Sbjct: 84 TSLVGKDGAGKRVLIISELTVVNPGAEVKSKIG----------EPVTYENAAKQDLAPKA 133
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
+ VAK + N M + MT HP+ SL+PYQ W IK RVTSK
Sbjct: 134 AAPSNSKPVAKKEPAHNNNNNVVMNASINSGMT---HPISSLSPYQNKWVIKARVTSKSG 190
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+RT+ NARGEG +F+++L DE G +I+AT F E KFYD Q+ VYYIS+ L+ ANK
Sbjct: 191 IRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANK 249
Query: 259 QFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
Q+ ++ N YEM + + V+ E ++ IP+ K+N +PI ++ N VD IG+
Sbjct: 250 QYSSLNNAYEMTFSGETVVQLCEDTDDDP-IPEIKYNLIPISDVSGMENKAA-VDTIGIC 307
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+ V S ++ N+ KR+IT+ D + ++++LW + A N + P++
Sbjct: 308 KEVGELQSFVARTTNKEFKKREITLVDMSNSAISLTLWGDEAVNFDGHV------QPVIL 361
Query: 377 IKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
+K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G ++A++ S A+
Sbjct: 362 VKGSRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDNVANMVS-----AR 415
Query: 436 NGARSMYSDRVSLTHI-TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKV 492
G + ++ ++L T N GD KP +F KA + ++K + A +YRAC CNKKV
Sbjct: 416 TGGGNFSTEWMTLKDARTRNLGSGD-KPDYFQCKAVVHIVKQENA-FYRACPQSDCNKKV 473
Query: 493 TDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNEL 552
D + CE C R ++ + D + W+S FNE E+++G S+ E+ E
Sbjct: 474 VDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHSSQEVGEA 533
Query: 553 KSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLE 612
D + + + H+ ++ + + + R ++TV++VAP++ +K LL+
Sbjct: 534 LEN--DPAKAEQIFSALNFTSHIFKLRCKNEVFGDMTRNKLTVQSVAPINHKEYNKHLLK 591
Query: 613 EI 614
E+
Sbjct: 592 EL 593
>gi|298710029|emb|CBJ31747.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 419
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 246/425 (57%), Gaps = 15/425 (3%)
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
MR + NARG G +F+V+L DEDG++I+ T F + A K++ Q G+VY + G ++VANK
Sbjct: 1 MRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANK 60
Query: 259 QFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQN 318
+F + +YE+ + ++++ +N+ + I + FV ++E+ + +++D+I VV++
Sbjct: 61 KFSSFNAEYELTFDSSTQI-NPINDDSRIGSATYAFVKLNEM-EALEANKVLDVIAVVKS 118
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
V ++ ++ KR++ + D+T + ++LW ++A G N P+VA K
Sbjct: 119 VEDHAQFVSRAGKQL-DKRNLILVDDTCTEINLTLWGDMAKADGSRWEGN----PVVAFK 173
Query: 379 SLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG--SGLGSLAKN 436
+K+ DF G SL++L ST++ PD+PE L++W+++ G G+S S+ +G G + +
Sbjct: 174 GVKLSDFSGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTVRNGGGGGSDD 233
Query: 437 GARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD--QAMWYRAC--KTCNKKV 492
A+ S R +L IT EKP + +KA IS IK D + WY AC + CNKKV
Sbjct: 234 AAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKV 293
Query: 493 TDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA-ERIIGCSADELNE 551
T+ + + CE C + EC RY++ ++ D +G+AW++ FN++ E + +ADEL +
Sbjct: 294 TETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLDNRTADELFQ 353
Query: 552 LKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLL 611
+K + G+D + E + ++L + V YN+E R R T++ +APVD AE LL
Sbjct: 354 MKEE-GNDAELEELFSEACFKTYMLTLRVKTDMYNDETRSRKTLQRLAPVDVKAECAALL 412
Query: 612 EEISK 616
+ I+K
Sbjct: 413 DAIAK 417
>gi|195145076|ref|XP_002013522.1| GL24182 [Drosophila persimilis]
gi|194102465|gb|EDW24508.1| GL24182 [Drosophila persimilis]
Length = 603
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 308/604 (50%), Gaps = 43/604 (7%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + V+Q+L +K RY SDGK A+L S L+ G + +++
Sbjct: 19 DVVKPVLQILAIKKINSNADAERYRILISDGKYFNSYAMLASQLNEMQHKGQLDEFTIVQ 78
Query: 78 LLDYALNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG 135
L Y + + ++ LI+++ V++ E++ KI E ++D+V K
Sbjct: 79 LDKYVTSMVGKDGAGKRVLIISELTVLNAGAEVKEKI----GEPVTYENAAKQDKVAKAA 134
Query: 136 PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTS 195
P +V PK+E V +S + N + A + HP+ SL+PYQ W IK RVTS
Sbjct: 135 PPVV--PKKE-VTQSNNNNNNNITLNASIGAGM-----THPISSLSPYQNKWVIKARVTS 186
Query: 196 KGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRV 255
K +RT+ N RGEG +F+++L DE G +I+AT F E K++D Q+ VY+ S+ L+
Sbjct: 187 KTGIRTWSNPRGEGKLFSMDLMDESG-EIRATAFKEQCDKYFDMIQVDSVYFFSKCQLKP 245
Query: 256 ANKQFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDII 313
ANKQF + N YEM + V+ E ++ A IP K+N VPI E+ N VD I
Sbjct: 246 ANKQFSQLNNAYEMTFTGETAVQLCEDADDGA-IPDIKYNLVPISEVSGMENKAA-VDTI 303
Query: 314 GVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP 373
G+ + V + ++ N+ KRD+T+ D + ++++LW + A N + P
Sbjct: 304 GICKEVGELQAFTSRTTNKEFKKRDLTLVDMSNSAISLTLWGDDAVNFDGHV------QP 357
Query: 374 IVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS 432
++ +K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G ++A++ S
Sbjct: 358 VILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDNVANMVS---- 412
Query: 433 LAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNK 490
A+ G S +D ++L + +KP +F KA + ++K + A +YRAC CNK
Sbjct: 413 -ARTGGGSFSTDWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENA-FYRACPQADCNK 470
Query: 491 KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
KV D Y CE C R ++ V D + W++ FNE E+++ ++ E+
Sbjct: 471 KVVDEGNDQYRCERCNALYPNFKYRLLVNMSVGDWTSNRWVTCFNETGEQLLKHTSQEIG 530
Query: 551 ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
E D + + + H+ ++ + Y + R ++TV++V P++ ++ L
Sbjct: 531 EALEN--DPTKAEEIFSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVGPLNHKEYNRHL 588
Query: 611 LEEI 614
L+E+
Sbjct: 589 LKEL 592
>gi|169600091|ref|XP_001793468.1| hypothetical protein SNOG_02875 [Phaeosphaeria nodorum SN15]
gi|160705373|gb|EAT89606.2| hypothetical protein SNOG_02875 [Phaeosphaeria nodorum SN15]
Length = 578
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 315/593 (53%), Gaps = 41/593 (6%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
R+ SD + ++ ++ + + V SG ++ ++RL+ Y ++ K + LI+ + E
Sbjct: 13 RFRVVLSDIRNFIQTMIATTANDIVTSGQLKKGSIVRLVKYNPQQV--KDKNILIIMELE 70
Query: 101 VVSPALEMEI-----KIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQIL 155
V+S E++ ++ KSD P Q + G ++ A + L
Sbjct: 71 VLSQYGELDKIGQPEALDTKSD-------PPQPAAIS----GNNFYGSKQPPAPQPQRNL 119
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
N A ++ ++P+ SL+PY WTI+ R T+K +M+ + NA+G G +F+V
Sbjct: 120 PVHQSNPATSSH----PHLYPIESLSPYAHKWTIRARCTNKSDMKEWHNAKGTGKLFSVN 175
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNEN 274
L D+ G +I+AT F EAA K + F++G VYYIS + +A KQF + NDYE+ ++
Sbjct: 176 LLDDTG-EIRATAFTEAAEKLFPVFEVGTVYYISAPCRVTLAKKQFSNLPNDYELQFEKD 234
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
+EVE+A ++ PQ +FNF I +L V +D +GV++ V+ +I K+ N+
Sbjct: 235 TEVEKAEDQDN-KPQIRFNFTKIGDLNS-VEKDTTIDTVGVLKEVAEVNTITSKNTNKDF 292
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR++T+AD+++ +V +++W + A E D A I+A K +KV DF G SLS L
Sbjct: 293 SKRELTLADDSQTSVRLTIWGKTA-----ETFD-APLESIIAFKGVKVSDFGGRSLSLLS 346
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
+++V PD+ EA KL+ W+ + G+ + ++ + G+ +G S +++ I
Sbjct: 347 SGSMMVDPDIDEAHKLRGWFNAVGQNATFSTHQNMAGA---SGGSSKNENKLISQCIEEE 403
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEEC 512
L D P + S+KA + +K + + Y AC T CNKKV + +WCE CQ++ E
Sbjct: 404 TYLQD-TPSYMSLKASVVYVK-NTTVAYPACSTAGCNKKVIEENPGSWWCEKCQQSFPEP 461
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNS--YQMKLKEVT 570
+ RY++ V D +G W+S F+E + I+G SA+E ++K ++N+ + ++E T
Sbjct: 462 NYRYVLSVNVADHTGTLWLSCFDEAGQSIVGMSANEAMKIKVDDEENNTQNFMTAMQEAT 521
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQNA 623
RV + Y ++ + R V + P+++A E+ L + I + +++++
Sbjct: 522 CKTFNFRVRAKMETYQDQPKPRYQVMNMYPLNYAQEANKLAQLIKQYDTNEDS 574
>gi|67900872|ref|XP_680692.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
gi|40742813|gb|EAA62003.1| hypothetical protein AN7423.2 [Aspergillus nidulans FGSC A4]
Length = 606
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 305/622 (49%), Gaps = 55/622 (8%)
Query: 14 LSNPSPDSSSDIPEI------VVQVLDLKLTGN---RYMFNASDGKKRLKAILPSNLSSE 64
LS PS + P+I VQV L N RY SD ++ +L +
Sbjct: 13 LSVPSGIFDATKPQISEPIVQCVQVKPLPPQANNQERYRVVFSDISNYVQTMLAIQANHF 72
Query: 65 VISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFK 124
V G ++ +RL + N + K +K LIV EV+ E E E K ES
Sbjct: 73 VTDGLLRKGCFVRLKQFQANSV--KGKKILIVLDLEVLKELGEAEKLGEPKPLES----- 125
Query: 125 PKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTR--------RVHP 176
K E+E K P+ ++ + + QN ++R TR ++P
Sbjct: 126 -KAEEEEK---------PQPTTISSNGFYGAKAQNAPSQISSRAQHTRPMQGSAPATIYP 175
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ +++PY WTIK R TSK ++T+ G+G +F+V L D+ G +I+AT FNE
Sbjct: 176 IEAISPYAHKWTIKARCTSKSPIKTFHGRSGDGTLFSVNLLDDSG-EIRATGFNEQCSAL 234
Query: 237 YDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
YD FQ G+VYYIS +++A KQF + NDYE+ ++ VE+A E +PQ +FNF
Sbjct: 235 YDLFQEGEVYYISSPCRVQIAKKQFTNLNNDYELTFERDTLVEKA-EEQNDVPQVRFNFT 293
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I +L + V +D+IGV+++V T I K+ + KR++T+ D T +V +++W
Sbjct: 294 TIGDL-QSVEKDTTIDVIGVLKDVGETTQIVSKTTKKPYDKRELTLVDNTGFSVRLTIWG 352
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
A N A +VA K +KV DF G SLS L +V V PD+ EA +LK WY+
Sbjct: 353 TTAMNFA------ASPESVVAFKGVKVSDFGGKSLSLLSSGSVTVDPDIEEAHRLKGWYD 406
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLI 474
++G+ + AS S +G+++ + D++ LG E+P +F+++A + I
Sbjct: 407 AQGRNENFASHASSVGTMS-----ATKRDQLKTIAQVREEQLGMSEEPSYFTLRATVVYI 461
Query: 475 KPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
K D + Y AC + CNKKVT+ + CE C K RYIM+ V D +G+ +++
Sbjct: 462 KQDN-LCYPACLSEGCNKKVTEVDPGQWRCERCDKTHPRAEYRYIMLVNVSDHTGQLYLN 520
Query: 533 IFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQR 592
F++ ++G SA++L EL D + ++ T Y +++R R
Sbjct: 521 CFDDVGRLLLGMSANQLMELPQ--NDGKALGNVIQNATCRTWTFGCRAKIDHYGDQQRIR 578
Query: 593 VTVRAVAPVDFAAESKFLLEEI 614
V PV+++ E+ L + I
Sbjct: 579 YQVSYAKPVNYSEEASRLADII 600
>gi|345565697|gb|EGX48646.1| hypothetical protein AOL_s00080g275 [Arthrobotrys oligospora ATCC
24927]
Length = 606
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 182/632 (28%), Positives = 317/632 (50%), Gaps = 49/632 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLK 54
M +S A++ I + + + ++Q+L +K T RY SDG +
Sbjct: 1 MASKLSGGALAAIFAAGCENPKEAWKDPIMQILLVKKIEAQGKTPERYRIVVSDGIHFTQ 60
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIK--I 112
++ S + + I+ ++R+ +Y ++ KS LIV E+ A E +I
Sbjct: 61 GMIASQSNHLMAENKIEKGSIVRMKEYEAGKVKDKS--VLIVLAVELAQEATEEKIGDPK 118
Query: 113 EVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMV-------AKSAAQILRDQNGNMAPA 165
+V D + + + + + KP ++ A Q R Q+ ++
Sbjct: 119 QVTPDSASELAQQRAAQQPTTTSNFYGNKPANAGRGAGGAGPSRGAGQSSRGQSAGISL- 177
Query: 166 ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
+ SL+PYQ WTIK R +G ++ +KNA+G+G +F V D+ +I+
Sbjct: 178 -----------IESLSPYQNRWTIKARCIHRGEIKNWKNAKGDGKLFAVSFKDQSA-EIK 225
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETA 285
AT F + Y F+ G VY IS+ +++A +QF + NDYE+ + +SEV++ V++
Sbjct: 226 ATGFGDQVDSLYHVFEEGSVYLISKCKVQIAKRQFSNIDNDYELVFDRDSEVQK-VDDDE 284
Query: 286 FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
+PQ ++NFV + +L + +D+IG+++ V + SI + KRD+ + D+T
Sbjct: 285 GVPQQQYNFVTLQDLQNTEKDAQ-IDVIGILKEVGESDSIVSAKTQKAFTKRDLHLVDDT 343
Query: 346 KRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLP 405
TV +++W + A E++ + ++A+K +KV DF G SLS ST+ V PDL
Sbjct: 344 GYTVKLTVWGKSAEKF--EIMPES----VLAVKGVKVSDFGGRSLSMQNSSTMQVDPDLE 397
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVF 464
EA +LK W+ SEG+ T+ S GL + +G R V S+ ++G E F
Sbjct: 398 EAHRLKGWFSSEGRDTNFNS-HKGLSTGGADGNRPSVFKTV---QQASDENIGFGETADF 453
Query: 465 FSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
+++KA IS IK ++ Y ACKT C+KKV + GS + CE C N E RYI+
Sbjct: 454 YTLKATISYIK-NEGHSYPACKTEGCSKKVVEFNGS-WRCEKCSVNWPEPEYRYILTCSA 511
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
D +G+ W++IF++ + I+G +A +L+ ++ D++SY+ +K+ + R+ Q
Sbjct: 512 YDHTGQTWLNIFDDAGKVIMGTTASDLHAMQDY--DESSYEATMKKAASQTWMFRIRAQQ 569
Query: 583 QEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ Y + R R V + +D+AAE+ L+ I
Sbjct: 570 EVYQDVPRVRNRVLSAQKIDYAAEATRLINMI 601
>gi|393216703|gb|EJD02193.1| replication factor-a protein [Fomitiporia mediterranea MF3/22]
Length = 605
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 288/598 (48%), Gaps = 35/598 (5%)
Query: 29 VVQVLDLKLTG--------NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLD 80
V+Q+L LK G +R+ SDG +A+L + L+ V G I ++++
Sbjct: 30 VLQLLSLKKIGAAREGAAPDRFRLVVSDGVHYTQAMLATQLTGMVDEGEIAKYSVVKVEK 89
Query: 81 YALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVL 140
N + K K LI+ V E K + G + P Q +
Sbjct: 90 LTCNNVQNK--KLLILLALTPVGNPGE-------KIGDPGSLEVPGQNASSSTEAQATPT 140
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMR 200
VA+ + + + A V P+ L+PYQ WTI+ RVT K ++R
Sbjct: 141 TAVNTPVAQQQKSVQSQKPPQQQQQQQRANGPVVFPIEGLSPYQNKWTIRARVTVKSDVR 200
Query: 201 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQF 260
Y +GEG +F V L D+ G +I+AT FN +FYD+ + GKVYY+S+ + +A K+F
Sbjct: 201 HYSTPKGEGKIFTVTLMDDSG-EIRATGFNHQVDQFYDKLEEGKVYYVSKARVNLAKKKF 259
Query: 261 KTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS 320
VQN+YE+ L +E+ E ++ A PQ ++FV + ELG T D+IG+V++VS
Sbjct: 260 SNVQNEYELMLGTETEISECADQAA-APQITYHFVKLSELGNQEKDT-TCDVIGIVKDVS 317
Query: 321 PTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL 380
I K+ + KR++T+ D ++ V ++LW + A + A++ ++A K
Sbjct: 318 DVTEIVAKATGRTIKKRELTLIDLSEFAVRMTLWGKQAESY------TAEEHAVLAFKGA 371
Query: 381 KVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM--ASIGSGLGSLAKNGA 438
+VGDF G SLS + + V+PD+ EA L+ W++S + S GS +
Sbjct: 372 RVGDFGGRSLSMSNATHMSVNPDINEAHVLRGWFDSLNSPPAFKSHSGGSSSAGGFGDIR 431
Query: 439 RSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGS 498
R + + + N G E FS + I IK D ++Y AC TCNKKV +
Sbjct: 432 REAMKTLLEVRALQENVPDGGEN---FSCRGTILHIKADN-LFYPACPTCNKKVIEG-SE 486
Query: 499 GYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD 558
G+ CE C + E R++M V D +G+ W++ FN+ + G +A EL+ELK + D
Sbjct: 487 GWRCEKCDRAYTEPEYRFMMSMSVADHTGQVWLNGFNDVGLVVFGKTASELHELKER--D 544
Query: 559 DNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+++Y + T + Q YN + R R ++ + P+D+ E+ L + + K
Sbjct: 545 ESAYTAAIARATCNTYNFNCRAKQDTYNEQSRVRFGIQKIMPLDYKLEAGLLRDRLKK 602
>gi|146420901|ref|XP_001486403.1| hypothetical protein PGUG_02074 [Meyerozyma guilliermondii ATCC
6260]
Length = 469
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 241/460 (52%), Gaps = 37/460 (8%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+P+ L+PYQ NW IK RV+ KG++R + NARGEG +FNV DE +I+AT FN+ A
Sbjct: 24 FNPIELLSPYQNNWRIKARVSFKGDIRKWSNARGEGKLFNVNFLDE-SDEIRATAFNDVA 82
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+FY+ + GKVY + R ++ A QF + + YE+ L++++ + E +T+ +P+ FN
Sbjct: 83 EQFYNTLEEGKVYTVERARIQQAKPQFSHLTHPYELALDKDTVITECF-DTSDVPKLHFN 141
Query: 294 FVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F +D++ VN +VD+IGV++ +P I KS + +R+IT+ D++ + +
Sbjct: 142 FTKLDKIQAAEVNA--VVDVIGVLKTANPVFQITAKSTGKAFDRRNITIVDDSNFAIDIG 199
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LWN+ A L N + ++A K KV DF G SL+ +++V+PD PEA +LK
Sbjct: 200 LWNQTA------LEFNTSEGSVIAFKGCKVQDFGGRSLTLTHSGSMVVNPDTPEAYQLKG 253
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYI 471
WY+++G + S+ + G Y +LG EKP FFS+KA I
Sbjct: 254 WYDNQGMNENFKSLK------VEAGPNQNYIKNRKTILAAQEDNLGMHEKPDFFSVKATI 307
Query: 472 SLIKPDQAMWYRAC---------------KTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
S K D Y AC TCN+KV + G+ CE C E RY
Sbjct: 308 SYFKTDN-FSYPACSNTVPGNSQAPGQQENTCNRKVLEQ-SDGWRCEKCNITLPEPLHRY 365
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ--LGDDNSYQMKLKEVTWVPH 574
I+ + D +G+ W ++F++EA ++ G SA +L LK + + + N + ++ +T
Sbjct: 366 ILNCSITDETGQLWTTLFDQEARKLFGMSAGDLINLKEKQDMNESNEFADLMESITMKEF 425
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
R+ Q YN R R ++ VDF AE L +E+
Sbjct: 426 NFRLRARQDSYNGNVRIRYQTMSLFDVDFVAECDELCQEL 465
>gi|322778947|gb|EFZ09361.1| hypothetical protein SINV_08959 [Solenopsis invicta]
Length = 572
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 238/448 (53%), Gaps = 23/448 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R P+ +L+PYQ W IK RV K ++T+ ++RGEG F + L DE G +I+ F E
Sbjct: 135 RTTPIAALSPYQNRWVIKARVIHKSLIKTWSDSRGEGKFFFMGLIDESG-EIRCKAFGEM 193
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFYD G VYYISR TL+ ANKQ+ +++NDYEM + ++E+ + IP ++
Sbjct: 194 VDKFYDLIVAGNVYYISRCTLKTANKQYNSMKNDYEMLMTSDTEIVPCRDSNNDIPTLQY 253
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF PI ++ + +L+D++GVV V ++ E++ KR+I++ D++ VTV+
Sbjct: 254 NFSPISQV-EHKEKNDLLDVLGVVTTVGDVQHFTARTGRELI-KRNISIVDDSDTMVTVT 311
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW A +A + I+AIK +V +F G LS + S + P++PEA +L+
Sbjct: 312 LWGTQAEEF------DASNNTIIAIKEARVDEFNGKHLSLIMSSIIEKDPNIPEAHRLRG 365
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAY 470
WY + G + S+ GS NG + + ++ LG + P F+I A
Sbjct: 366 WYTAVGHSETAKSLSRVGGSTDFNGPLYTFQE-------ATDARLGKKMNLPDSFTIVAT 418
Query: 471 ISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
I I+ + + YRAC ++C KK+ D + CE C K + R + + D +G
Sbjct: 419 IKQIRTENSP-YRACPLESCKKKLIDQNNGTFRCEKCNKKYPNFTYRLLANMELADATGS 477
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
WI+ FNEEAE+I+G SA EL ELK D ++Y K+ E T+ + + + + +
Sbjct: 478 RWITAFNEEAEKILGMSAQELGELKEN--DKDAYLQKIGEATFKTFMFNLKARSEVFQDT 535
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + +V P+++ L++++SK
Sbjct: 536 MRIKRVCTSVRPINYKTYLPHLIDKVSK 563
>gi|406694919|gb|EKC98235.1| hypothetical protein A1Q2_07466 [Trichosporon asahii var. asahii
CBS 8904]
Length = 591
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 302/616 (49%), Gaps = 66/616 (10%)
Query: 21 SSSDIPE---IVVQVLDLKLTG---------NRYMFNASDGKKRLKAILPSNLSSEVISG 68
++S+ PE V+QVL +K +RY SDG+ ++++L + L+ V +
Sbjct: 15 TASETPEGVEPVLQVLSVKRINSPASGAQATDRYRVILSDGEYFIQSMLATQLNHLVEND 74
Query: 69 NIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQE 128
++ +I+L + +N + ++ K +I+ + +E ++ + P
Sbjct: 75 ELEKNTVIKLTSFVINTV--QNRKLIII-------------LALERQNWNGQKVGNPVNV 119
Query: 129 DEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR----VHPLVSLNPYQ 184
D+ G V P E + R N PAA R + P+ L+PYQ
Sbjct: 120 DQRAAGG---VASPAPEAAPVTNGAASRGGASNARPAAAPRGPSRDMGPIFPIEGLSPYQ 176
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
WTIK RVT K +++ + N RGEG +F+V L DE G +I+AT FN+ FY + GK
Sbjct: 177 NKWTIKARVTQKSDIKHWSNQRGEGKLFSVTLMDETG-EIRATGFNDQVDAFYQLLEEGK 235
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
V++IS+ + +A KQF V N+YE+ +E+E +V P+ K+NF +++L +
Sbjct: 236 VFFISKARINIAKKQFSNVNNEYEITFENQTEIEPSV------PEIKYNFTKLNDL-ESL 288
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
D+IGVVQ V I K+ + KRDI + D++ ++V ++LW + A N
Sbjct: 289 QKDATTDVIGVVQEVHDLGQITSKATQKPFNKRDIQLVDQSGQSVRLTLWGKTAENFTHY 348
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
P+VA K +KV DF G SLS +T+ ++P+ EA L+ WY+S G+ T+
Sbjct: 349 ------DHPVVAFKGVKVSDFGGRSLSMFSSATMAINPNTDEACALRGWYDSVGEKTNFK 402
Query: 425 SIGSGLGSLAKNGARSMYS--DRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMW 481
+GA + S D + + LG +K +FS+ A I IK +
Sbjct: 403 -------QYTNSGAMNAVSRPDEIKTIGQAKDEQLGMTDKTDYFSVCATILYIK-QETFS 454
Query: 482 YRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
Y AC + CNKK+ D G+ + CE C + RYI+ V D +G WI+ FNE E
Sbjct: 455 YPACPGEGCNKKLIDE-GAEWRCEKCNRTYPGPVHRYILQMNVIDHTGSFWITGFNEVGE 513
Query: 540 RIIGCSADELNELKSQLGDD-NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
+I+G SA+EL +LK + + Y + W ++ Q +N+ R R R+
Sbjct: 514 QIMGVSANELFKLKQESDPEAEKYFTRAAGREWD---FKIMAKQDFFNDTARVRYQARSC 570
Query: 599 APVDFAAESKFLLEEI 614
AP+++A S+ L+ +I
Sbjct: 571 APINYAQSSQALVGKI 586
>gi|389748589|gb|EIM89766.1| replication factor-a protein [Stereum hirsutum FP-91666 SS1]
Length = 596
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 248/441 (56%), Gaps = 18/441 (4%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ L+PYQ NWTIK RV K ++RTY N RGEG FNV L D+ G +I+ T FN A
Sbjct: 164 IFPIEGLSPYQNNWTIKARVIQKSDIRTYSNQRGEGKFFNVTLMDDSG-EIKGTGFNAVA 222
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+ YD+ KVYYIS+ + ++ ++F + Q +YE++L N+E+EE ++T+ +P K+N
Sbjct: 223 DELYDKLVEDKVYYISKARVNLSKRKFSSAQ-EYELSLERNTEIEEC-HDTSNLPVVKYN 280
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F+ + L + + D+IGVV++VS I+ K+ + KR++T+ D + +V ++L
Sbjct: 281 FIELGNLEELPKDS-ICDVIGVVKDVSEVSEIQTKTQRTL-SKRELTLVDSSAFSVRLTL 338
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W + A NA + ++A K +KVGDF G SLS ST+ ++PD+PEA ++ W
Sbjct: 339 WGKQAEQY------NASPNSVIAFKGVKVGDFGGRSLSMFSSSTMAINPDMPEAHNIRGW 392
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
Y+ G T + S + S A G S+ +L + + +K +FS +A +
Sbjct: 393 YDDIGTSTQFQAHTSSMTS-AGTGGTINRSEMRTLNDVKESQLGSSDKVEYFSCRATVMH 451
Query: 474 IKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
I+ + + Y AC T C+KKV + G+ CE C ++ E + RY++ V D SG+AW+
Sbjct: 452 IRGEN-ISYPACGTEGCSKKVVEG-HDGWRCEKCDRSFETPTYRYMIQMAVADYSGQAWL 509
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
S FN+ + G +A+EL+++K + DD Y L++ T + Q +N+ R
Sbjct: 510 SGFNDVGLIVFGMTANELHDIKER--DDAIYTAILQKATCNTYNFACRAKQDTFNDTTRI 567
Query: 592 RVTVRAVAPVDFAAESKFLLE 612
R + + P+++ E++ ++
Sbjct: 568 RYGISRIQPLNYEEETQSFVD 588
>gi|356507210|ref|XP_003522362.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Glycine max]
Length = 586
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 221/416 (53%), Gaps = 17/416 (4%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N AP R R+ P+ +LNPYQ WTIK RVT K +R Y NARG+ VF+ +L D D
Sbjct: 179 NKAPMGRNEAAPRIIPIATLNPYQSMWTIKARVTFKAELRHYTNARGDRKVFSFDLLDSD 238
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G +I+AT FN A +FY+ + GKVY I RG+++ K F + ND E+ L+ S ++
Sbjct: 239 GGEIRATCFNVVADQFYNVIEAGKVYLIFRGSIKPTQKNFNHLPNDQELTLDVASIIQPC 298
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
+++ I FN+ PI E+ N +VD+IGVV ++SP SI RK+ E V KR +
Sbjct: 299 LDDNDSITSQTFNYRPISEIESLENNN-IVDVIGVVTSISPKTSIMRKNGTE-VQKRTLQ 356
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNAD--KSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D + R+V ++L GQ L D + P++A K+++V DF G S+ T+ S +
Sbjct: 357 LKDMSGRSVELTLRGNFCIVEGQMLQSICDVGEFPVLATKAIRVNDFNGKSVGTIATSQL 416
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
V D PEA LK W+E+EGK SI + +L K R +++ I
Sbjct: 417 YVEADFPEACILKIWFENEGKSVPTLSISREMSNLGKTDVRK------TISQIKDEKLGT 470
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEEC 512
EKP + S+ A IK D +Y C + CNK VT+ + CE C ++ + C
Sbjct: 471 SEKPNWISVFAAFXHIKVDN-FYYPGCPLKIRDRQCNKNVTNNADGTWHCEICIQSIDAC 529
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
RY++ ++ D + W+++F + E I+G A L +K + DD+ + + K
Sbjct: 530 DFRYLLSMQIQDHTSITWVTVFQKSGEEIMGIPAKYLYYMKYEEQDDDKFILDSKH 585
>gi|193667016|ref|XP_001951063.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 609
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 185/632 (29%), Positives = 330/632 (52%), Gaps = 52/632 (8%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDL-KLTG----NRYMFNASDGKK-RLKA 55
+K ++ A+ +I++N D+ + V+QVL + K+T RY SDG A
Sbjct: 4 EKMLTKGALKSIMNN------EDVKDPVMQVLGVRKITAAGANERYRLLISDGHNLNSFA 57
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSE---KYLIVTKCEVVSPALEMEIKI 112
+L + L+ V SG I ++++ + ++ + +S+ + +I+ V+ P + KI
Sbjct: 58 MLATQLNGMVSSGEINEFSILQIKRHIISSLTDRSKGSKQVMILIDLAVMVPGDVVGSKI 117
Query: 113 EVKSDESGIIFKPKQEDEVKKDGPGIVL--KPKQEMVAKS-AAQILRDQNGNMAPAARLA 169
D II Q + ++G + P+ +AKS + Q NG R
Sbjct: 118 ---GDPKPIIDNSGQ---IVENGASASVDSTPQSNSLAKSHSVQSSVINNG----LQRDI 167
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+HP+ SL+PYQ WTI+ RV +K +RT+ N RGEG +F+++L DE G +I+AT F
Sbjct: 168 DVSNIHPINSLSPYQNKWTIRARVVNKAPVRTWNNQRGEGKLFSMDLLDESG-EIRATAF 226
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIP 288
N KF+D ++ KVY+I+RG ++ ANK+F + NDYE+ L+ +++ + + + +P
Sbjct: 227 NSECDKFFDMIEVNKVYFITRGAIKTANKKFSNLNNDYELTLSGETQIFPCHDFDDSQMP 286
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
KFNFVP+ ++ + V+ +VD+IGV Q + K+ + + KRD+T+ D++ +
Sbjct: 287 ALKFNFVPLSQV-KDVDVDGIVDVIGVCQTAGELTMLMSKTTRKELKKRDVTIVDQSLSS 345
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEA 407
VT++LW+ A + L P++AIK ++ +F G SLS LG + + ++PD+ EA
Sbjct: 346 VTITLWDTQAEDFDGSL------QPVIAIKGSRIREFMGSKSLSLLGSTVMQINPDIDEA 399
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFS 466
+L+ WY+S SI + A N ++ +++ LG +K ++S
Sbjct: 400 HRLRGWYDSLPSNAEFTSISARSDVGANNQFLTIKGAQLA--------QLGSGDKADYYS 451
Query: 467 IKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
+ +++ +K + A+ Y+AC C KKV D Y CE C E R ++ A++ D
Sbjct: 452 MYSHLIFVKSESAL-YKACPKPDCQKKVIDRNDGTYRCEKCNDETENFKYRLMLSAQLSD 510
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+G W+++F E AE ++G ++ EL L + ++ Y + + +R +
Sbjct: 511 STGNQWVTMFQETAESLLGTTSAELGRLMEESKEE--YSDVFQNQMFKLFDIRARAKMET 568
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
YNNE R +VT+ ++ P+D+ S L+ I +
Sbjct: 569 YNNETRLKVTLFSIKPIDYKVASTKLIATIKR 600
>gi|195037625|ref|XP_001990261.1| GH19242 [Drosophila grimshawi]
gi|193894457|gb|EDV93323.1| GH19242 [Drosophila grimshawi]
Length = 602
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 175/612 (28%), Positives = 306/612 (50%), Gaps = 52/612 (8%)
Query: 24 DIPEIVVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+P+ V+Q+L +K RY SDGK A+L S L+ G + ++R
Sbjct: 12 DVPQPVLQILGIKRINTNSDQERYRLLMSDGKYYNSYAMLASQLNEMQHKGLLTENTIVR 71
Query: 78 LLDYALNEIPTKS--EKYLIVTKCEVVSPALEMEIKI--------EVKSDESGIIFKPKQ 127
L Y + + + ++ LIVT+ V+ E++ K+ K + +
Sbjct: 72 LDKYMTSMVGKEGSGKRVLIVTELTVLKSGEEVKTKLGEPVTYENAAKPEAAPKAAPAAA 131
Query: 128 EDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNW 187
VKKD + + + NG + + HP+ SL+PYQ W
Sbjct: 132 SAPVKKD------QSYNYNNNNNNNTMNSTMNGTLNSSL-------THPIASLSPYQNKW 178
Query: 188 TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYY 247
IK RVTSK +RT+ NARGEG +F+++L DE G +I+AT F E KFYD ++ VY+
Sbjct: 179 VIKARVTSKTAIRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIEVDNVYF 237
Query: 248 ISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNFVPIDELGRYVNG 306
S+ L+ ANKQ+ ++NDYEM + V+ + + IP+ KF+ VPI ++ N
Sbjct: 238 FSKCQLKPANKQYSQLKNDYEMTFTGETMVQLCDDADDGGIPEIKFDLVPISQVASMENK 297
Query: 307 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 366
VD IG+ ++V + ++ N+ KR++T+ D + + ++LW + A N
Sbjct: 298 AA-VDTIGICKDVGEVQTFTSRTTNKEFKKRELTLVDMSNAAINLTLWGDEAVNF----- 351
Query: 367 DNADKSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS 425
+ P++ +K ++ +F G SLS G S + ++PD+PEA KL+ W+++ G G ++++
Sbjct: 352 -DGHVQPVILVKGSRINEFNGGKSLSMGGGSILKINPDIPEAHKLRGWFDN-GGGDNISN 409
Query: 426 IGSGLGSLAKNGARSMYSDRVSLTHI-TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRA 484
+ S A+ G S +D V+L N GD KP +F KA + ++K + A +Y++
Sbjct: 410 LVS-----ARTGGGSFSTDWVTLKDARIRNLGSGD-KPDYFQCKAVVHIVKQENA-FYKS 462
Query: 485 C--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
C CNKKV D Y CE C R ++ + D + W++ FNE E+++
Sbjct: 463 CPQTECNKKVVDEGNGQYRCERCNAAYPNFKYRLLINMSIGDWTSNRWVTCFNEAGEQLL 522
Query: 543 GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
+A E+ E D S + ++ + + ++ + Y + R ++TV+++ P++
Sbjct: 523 KHTAQEVGEALEN--DPTSAEKMFGDINFSSFIFKLRCKNEMYGDMTRNKLTVQSMTPIN 580
Query: 603 FAAESKFLLEEI 614
+ +K L++E+
Sbjct: 581 YKEYNKHLIKEL 592
>gi|270013263|gb|EFA09711.1| hypothetical protein TcasGA2_TC011844 [Tribolium castaneum]
Length = 593
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 244/456 (53%), Gaps = 30/456 (6%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
++ + P+ SLNP+ NW I+ RV +K N+R + NA+GEG +F+++L D+ G +I+ T F
Sbjct: 151 SKTISPIASLNPFHNNWIIRARVVNKTNVRNWSNAKGEGKLFSIDLVDKGG-EIRCTAFR 209
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
+ KF+DR ++ KVYYIS+ L+ N+QF ++++ +EM + +E + ++ IPQ
Sbjct: 210 DLVDKFFDRLEVDKVYYISKCQLQPINRQFCSLKHQFEMYFTPETIIEPSYDDNEIIPQI 269
Query: 291 KFNFVPIDELGRYVNGT-------ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
+NF ID++ GT ++D+IGV + +S S KS N + KR + + D
Sbjct: 270 TYNFTTIDKVAVMEAGTIVGNWRMSILDVIGVCKTISELQSFVAKSTNREMQKRQLVLVD 329
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSP 402
+TK ++++LW A + +P++ +K+ K+ +F+G S++ +G S + + P
Sbjct: 330 QTKTAISLNLWGSQAESFA------VTGNPVILVKNAKIYEFRGAKSITLMGTSLLKIDP 383
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
++ E L+ WY SEG + ++ +NG Y LT + EKP
Sbjct: 384 EIRETHILRRWYHSEGNQVEITNVSH------RNG----YGSTPWLTFKEARQQTISEKP 433
Query: 463 VFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
+++ I L++ D+A+ Y++C C KKV D Y CE C + R ++
Sbjct: 434 LYYQTFGTILLVRLDRAV-YKSCPNADCQKKVLDLENGMYRCEKCNREFPNFKYRLLVSM 492
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
V D S W+++F+ EAE+I+G +A E+ EL D ++ +E + + +
Sbjct: 493 NVADSSSSQWVTVFSSEAEKILGKTAQEIGELMET--DPDTVANMFEEAQFKQFIFKCRA 550
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ YN+E++ + V VAPVD+ + +L++ I K
Sbjct: 551 KIETYNDEQKMKTVVVTVAPVDYEEYNAYLVDRIEK 586
>gi|358334004|dbj|GAA32083.2| replication factor A1 [Clonorchis sinensis]
Length = 551
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 250/457 (54%), Gaps = 27/457 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SLNPYQ WT++ RV+ K ++RT+ +G +FN L DE G +I+ T FN
Sbjct: 93 KVFPIQSLNPYQNRWTVRARVSQKSSIRTWNKQGRDGKLFNFTLVDESG-EIRVTAFNAE 151
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE-TAFIPQTK 291
KF+D ++ K YY++R L+ ANKQF T NDYEM LN +S++ +E +P+T
Sbjct: 152 VDKFFDMIEVNKAYYVTRANLKAANKQFNTTNNDYEMTLNADSQIIPCEDEDITALPETH 211
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
FNFV I +L G+ VD++GVV + S +I K++ + KR++ + D ++ V +
Sbjct: 212 FNFVSIGKLDTCEPGS-FVDVVGVVHDTSEVQTIMAKASQRELRKRELGLVDSSRCLVRL 270
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKL 410
+LW + A + + + P++ +K KV DF G SLS S+VLVSP ++PEA +L
Sbjct: 271 TLWGDEAASF------DGSQHPVIVVKGAKVSDFNGRSLSVSSTSSVLVSPTNVPEAIRL 324
Query: 411 KSWYESEGKGTS-------MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-KP 462
K WYE EG S M GSG G LA G+ + +L +G K
Sbjct: 325 KGWYELEGHKVSFDTYKSEMLGSGSG-GDLAGPGSTAGCLGGWNLIQDVKASGVGTHAKA 383
Query: 463 VFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
FF+ K+ + +K + M Y+AC T CNKKV D Y CE C + C R ++ A
Sbjct: 384 DFFTCKSTVVFLKKENFM-YQACPTEGCNKKVIDTGHGMYRCEKCGRETNHCKWRLLLAA 442
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV--TWVPHLLRV 578
++ D +G+ WI+ F E AE+++G SAD L +K + ++ L V +WV R+
Sbjct: 443 KIADLTGDLWITCFQEAAEQLLGQSADSLGAMKESQDEAQLERIFLNAVFNSWV---FRL 499
Query: 579 SVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
YN+E+R RV V V P+D ++ LL+ I+
Sbjct: 500 RAKVDRYNDEERLRVVVVEVRPLDHVDHARRLLKAIT 536
>gi|444321919|ref|XP_004181615.1| hypothetical protein TBLA_0G01500 [Tetrapisispora blattae CBS 6284]
gi|387514660|emb|CCH62096.1| hypothetical protein TBLA_0G01500 [Tetrapisispora blattae CBS 6284]
Length = 629
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/455 (32%), Positives = 252/455 (55%), Gaps = 24/455 (5%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
R + + L+PYQ WTIK RV+ KG+++T+ N RGEG + N L D G +I+AT FN+
Sbjct: 189 RPIFAIEQLSPYQNVWTIKARVSFKGDVKTWHNQRGEGKLLNFNLLDTSG-EIRATCFNQ 247
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQT 290
K+ + Q GKVY+IS+ L+ + +F + + YE+++ ++ +EE + T +P+T
Sbjct: 248 LVDKYNETIQEGKVYFISKARLQPSKPKFSNLSHPYELSIENDTIIEECNDVSTNDVPKT 307
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
FNF +D + + + +D++G ++ V+P + ++ + +RDI + DET +
Sbjct: 308 NFNFTKLDSI-QNLETNSTIDVLGAIKTVNPHFELTSRAGKKF-DRRDIEIVDETGFIIK 365
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
V LWN+ A + N + IVAIK ++V DF G SLS ST+ +PD+ EA L
Sbjct: 366 VGLWNQQAIDF------NVPEGSIVAIKGVRVTDFGGKSLSMGFSSTLTANPDISEAYSL 419
Query: 411 KSWYESEGKGTSMASIGS-GLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIK 468
K WY++ T+ S S G ++ G + + S R+++ N +LG EK FFS+K
Sbjct: 420 KGWYDANRNNTTFTSYNSESGGPVSGEGLKKIISQRITIAK-AKNDNLGRSEKGDFFSVK 478
Query: 469 AYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
A +S +K D Y AC T CNKKV + + CE C + RY++ + D +
Sbjct: 479 AAVSFLKVDN-FAYPACSTEGCNKKVIEQTDGTWRCEKCDVSFPSPKWRYMLTISIMDET 537
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDN---SYQMKLKEVTWVPHLLRVSVAQQ 583
+ W+++FNE+A+++IG A L E K ++ + Q+++K + + R+ +
Sbjct: 538 DQIWLTLFNEQAQQLIGLDASSLMETKENNPEEFNKITQQIQMKTLDF-----RIRARED 592
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
YN++ R R TV + + + +E+ +L EE+SK +
Sbjct: 593 NYNDQTRIRYTVSNIHELKYKSEADYLAEELSKSL 627
>gi|326435434|gb|EGD81004.1| hypothetical protein PTSG_10947 [Salpingoeca sp. ATCC 50818]
Length = 601
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/627 (27%), Positives = 303/627 (48%), Gaps = 48/627 (7%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLK---------LTGNRYMFNASDG-KKRLK 54
++P+A++ I+ + P+ + VVQ+L +K +R+ SDG K
Sbjct: 4 LTPNAVAAIMRDEGPE------DPVVQILTIKKISPGDSKGQKADRFRLTISDGTNKHNS 57
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
A+L + L+ +++ + G IRL + N + ++ +IV + EVV+ L I V
Sbjct: 58 AMLATQLNPMIVNEEVVKNGAIRLKKFMANTVQDRT--IIIVLQAEVVAKDLGSVIGDPV 115
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRV 174
E P +K + + + P+ A +
Sbjct: 116 GLGEKRKPAPAPAPSAATASRPAAPVKTENPYKSPPKPAM---------PSMAAASSGAY 166
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P++SL+PY WTI+ RV SK N+RT+ N RG G +F+V+L D+ G +I+AT FN+
Sbjct: 167 SPIMSLHPYLHRWTIRARVASKSNVRTWNNQRGSGRLFSVDLIDDSG-EIRATGFNDVCD 225
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ F++GK Y I G ++ ANK+F + N+YEM ++ V ++ IPQ KF+F
Sbjct: 226 SLHPVFEVGKCYVIQGGKIKPANKRFNQLNNEYEMQFESDTRVTLDMSADNVIPQQKFDF 285
Query: 295 VPIDELGRYVNGTE---LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
EL E D++ V +++ +I K+ + KRDIT+ D ++T
Sbjct: 286 KSFRELENTPVSRESNVFADVLAVCHSINDADTIITKATGRELTKRDITLLDRDGLSMTC 345
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
+LW + A + + + ++AIK+ +V D+ G SLS ST+ ++PD EA LK
Sbjct: 346 TLWGQDAEDFEK---NGGVVGAVLAIKAARVSDYNGRSLSVSQSSTMYINPDNDEAHSLK 402
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP-SLGDEKPVFFSIKAY 470
WY+ EG A++ + ++ G + R+ L+ I + + D KP +F A
Sbjct: 403 GWYDMEG-----ATVEAKPLTVRNAGGNTT---RILLSQIKDDQIGMIDGKPEYFMAVAT 454
Query: 471 ISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
++ IK D M YRAC +CNKKV + Y CE C K+ R + + D +G+
Sbjct: 455 VTYIKKDNCM-YRACPSDSCNKKVIENGPEEYRCEKCNKSYPNFKWRLMTSMSIADATGQ 513
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W++ F E AE+++ ++ EL L D+ ++ K+ + + + Y ++
Sbjct: 514 TWVTAFQESAEKLLDSTSQELGHLMEN--DEAAFSKKIADAQFRTWRFKCRAKADTYQDD 571
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEIS 615
R RV+V +PV++ E+ L+++I+
Sbjct: 572 TRVRVSVVDASPVNYVDEAAHLIQQIN 598
>gi|194904079|ref|XP_001980997.1| GG17466 [Drosophila erecta]
gi|190652700|gb|EDV49955.1| GG17466 [Drosophila erecta]
Length = 603
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/600 (29%), Positives = 310/600 (51%), Gaps = 44/600 (7%)
Query: 29 VVQVLDLKLTGN-----RYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+Q+L +K + RY SDGK A+L S L+ +G ++ +++L Y
Sbjct: 24 VLQILAIKKINSAADSERYRILISDGKYFNSYAMLASQLNVMQHNGELEEFTIVQLDKYV 83
Query: 83 LNEIPT--KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD-GPGI 138
+ + ++ LI+++ VV+P E++ KI +P E+ K+D P
Sbjct: 84 TSLVGKDGAGKRVLIISELTVVNPGAEVKSKIG----------EPVTYENAAKQDLAPKA 133
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
+ VAK + N M + MT HP+ SL+PYQ W IK RVTSK
Sbjct: 134 AAPSNSKPVAKKEPGHNNNNNVVMNSSINSGMT---HPISSLSPYQNKWVIKARVTSKSG 190
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+RT+ NARGEG +F+++L DE G +I+AT F E KF+D Q+ VYYIS+ L+ ANK
Sbjct: 191 IRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFFDLIQVDSVYYISKCQLKPANK 249
Query: 259 QFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQ 317
Q+ ++ N YEM + + V+ + + IP+ K+N +PI ++ N VD IG+ +
Sbjct: 250 QYSSLNNAYEMTFSGETVVQLCDDTDDDPIPEIKYNLIPISDVSGMENKAA-VDTIGICK 308
Query: 318 NVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAI 377
V S ++ N+ KR+IT+ D + ++++LW + A N + P++ +
Sbjct: 309 EVGELQSFVARTTNKEFKKREITLVDMSNSAISLTLWGDEAVNFDGHV------QPVILV 362
Query: 378 KSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKN 436
K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G ++A++ S A+
Sbjct: 363 KGSRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDNVANMVS-----ART 416
Query: 437 GARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTD 494
G + ++ ++L + +KP +F KA + ++K + A +YRAC CNKKV D
Sbjct: 417 GGGNFSTEWMTLKDARARNLGSGDKPDYFQCKAVVHIVKQENA-FYRACPQSDCNKKVVD 475
Query: 495 ALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS 554
+ CE C R ++ + D + W+S FNE E+++G ++ E+ E
Sbjct: 476 EGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVGEALE 535
Query: 555 QLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
D + + + H+ ++ + + + R ++TV++VAP++ +K LL+E+
Sbjct: 536 N--DPAKAEQIFSALNFTSHIFKLRCKNEVFGDMTRNKLTVQSVAPINHKEYNKHLLKEL 593
>gi|327283810|ref|XP_003226633.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Anolis carolinensis]
Length = 607
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 250/463 (53%), Gaps = 22/463 (4%)
Query: 161 NMAPAARLAMT-----RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
N PA++ T +V P+ SLNPYQ WTI RVT KG +RT+ N+RGEG +F++E
Sbjct: 150 NKGPASQFLSTPGGSQAKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIE 209
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN-LNEN 274
L DE G +I+AT FN+ KFY ++ KVYY S+G L+VANKQ+ +V+NDYE+ +N+
Sbjct: 210 LVDESG-EIRATAFNDQVDKFYPLIEMNKVYYFSKGQLKVANKQYTSVKNDYEITFINDT 268
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
S + + +P +F+FV I EL R + +VD+IGV + + K+ N V
Sbjct: 269 SVI--PCEDAQHLPSVQFDFVSIAELER-TSKDAIVDVIGVCKAYEEVTKLTMKTTNREV 325
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KRD+ + D + + V+V+LW + A N + + P+VAIK +V DF G SLS L
Sbjct: 326 SKRDLHLVDSSGKMVSVALWGQEADNF------DGSRQPVVAIKGARVSDFGGRSLSVLS 379
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
ST++V+PD PEA +L+ W++S+GK +SI +G + +
Sbjct: 380 SSTLVVNPDRPEAFRLRGWFDSQGKHLETSSISNGWSGGSGGSGGGGSGPNWKTLRESKT 439
Query: 455 PSLGD-EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
+LG EK ++S + ++ ++ + Y+AC + CNKK+ D Y CE C
Sbjct: 440 GNLGQGEKADYYSCIGTVIYLRKEKCL-YKACPSPDCNKKLVDEQNGLYRCEKCNLETPN 498
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
R I+ + D + W++ F E AE I+G +A L ELK D++++ +++ +
Sbjct: 499 FKHRMILQVNIADFQDQQWVTCFQEAAETILGQNATYLGELKET--DEHAFNSIIEKSFF 556
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
RV + +N+E R + T V PV+ L++ I
Sbjct: 557 ATFEFRVRAKMEMFNDELRLKTTALEVKPVNHKEYGHRLVQSI 599
>gi|261187451|ref|XP_002620149.1| replication factor rfa1 [Ajellomyces dermatitidis SLH14081]
gi|239594199|gb|EEQ76780.1| replication factor rfa1 [Ajellomyces dermatitidis SLH14081]
gi|239609246|gb|EEQ86233.1| replication factor rfa1 [Ajellomyces dermatitidis ER-3]
gi|327356481|gb|EGE85338.1| replication factor [Ajellomyces dermatitidis ATCC 18188]
Length = 603
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 308/616 (50%), Gaps = 40/616 (6%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS + E ++Q L +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSRPKVAEPILQCLQVKPLPAQPNSPERFRAVFSDITNYIQTMLATQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG + +RL + N + K ++ LI+ EV+ E KI
Sbjct: 68 HYVTSGQLVRGCFVRLKSFQANMV--KGKRILIILDLEVLERLGICEKKIGEPQP----- 120
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
KQE++ K I Q Q ++ ++P+ +L+P
Sbjct: 121 LDAKQEEQDKALPTTI---SSNGFYGSRGPQQQAPQQPAQRSSSSAGAHANIYPIEALSP 177
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y F+
Sbjct: 178 YSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLDDSG-EIRATAFKDQCDSLYGVFEE 236
Query: 243 GKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
G VYYIS +++A K F + N+YE+ +++ VE+A E +PQ +FNF I L
Sbjct: 237 GSVYYISSPCRVQIAKKAFNNLNNEYELTFEKDTVVEKA-EEQNDVPQIRFNFTNIANLQ 295
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
GT +D+IGV+++V T I K+ ++ KRD+T+ D T +V +++W N
Sbjct: 296 SVEAGT-TIDVIGVLKDVGETSQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWG----NT 350
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
+E D+ +S +VA K +KV D+ G SLS L ++ V PD+ +A KLK WY+++G+
Sbjct: 351 AKEF-DSVPES-VVAFKGVKVSDYNGRSLSLLSSGSMTVDPDIEDAHKLKGWYDAQGRSE 408
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAM 480
+ AS S + + A G R+ + H +LG EKP +FS+KA + IK D +M
Sbjct: 409 TFASHDS-MSNAAGFGDRASSFKTIVQVH---EGNLGMSEKPDYFSVKATVVYIKQD-SM 463
Query: 481 WYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
Y AC T CNKKV + CE C ++ RYI+ VCD +G W+S F+E
Sbjct: 464 AYPACLTDKCNKKVLQDDNGQWRCERCDQSFPHPEHRYILSVNVCDHTGAMWLSCFDEVG 523
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
+ I+G SA+EL ELK D+ +Y+ +++ + + +++R R V +V
Sbjct: 524 KLILGTSANELMELKE--NDERAYEELVQKANCRAWNFKCRAKMDNFQDQQRVRYQVLSV 581
Query: 599 APVDFAAESKFLLEEI 614
+ +D++AES L E I
Sbjct: 582 SAIDYSAESARLAEMI 597
>gi|194764875|ref|XP_001964553.1| GF23244 [Drosophila ananassae]
gi|190614825|gb|EDV30349.1| GF23244 [Drosophila ananassae]
Length = 603
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 177/606 (29%), Positives = 304/606 (50%), Gaps = 46/606 (7%)
Query: 24 DIPEIVVQVLDLK-----LTGNRYMFNASDGKK-RLKAILPSNLSSEVISGNIQNKGLIR 77
D+ + V+Q+L +K RY SDGK A+L S L+ G ++ +++
Sbjct: 19 DVSKPVLQILAIKKINSNADSERYRILISDGKYFNSYAMLASQLNEMQHKGQLEEFTIVQ 78
Query: 78 LLDYALNEIPTKS--EKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-KQEDEVKKD 134
L Y + + ++ LI+++ V++P +++ KI +P E+ K+D
Sbjct: 79 LDKYVTSMVGKDGAGKRVLIISELTVLNPGADVKAKIG----------EPVTYENASKQD 128
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNG-NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRV 193
P K A + N M + MT HP+ SL+PYQ W IK RV
Sbjct: 129 LAAKPAPPPVAAAKKEPAHNNNNNNNITMNSSMNAGMT---HPISSLSPYQNKWVIKARV 185
Query: 194 TSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTL 253
TSK +RT+ NARGEG +F+++L DE G +I+AT F E KFYD Q+ VY+ S+ L
Sbjct: 186 TSKTAIRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYFFSKCQL 244
Query: 254 RVANKQFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
+ ANKQ+ + N YEM + V+ E ++ A IP K+N VPI E+ N VD
Sbjct: 245 KPANKQYSQLDNAYEMTFTGETIVQLCEDADDGA-IPDIKYNLVPISEVSGMENKAA-VD 302
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
IG+ + V S ++ N+ KRD+T+ D + + ++LW + A N +
Sbjct: 303 TIGICKEVGELQSFVSRTTNKEFKKRDLTLVDMSNSAINLTLWGDDAVNFDGHV------ 356
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
P++ +K ++ +F G +LG +++ ++PD+PEA KL+ W+++ G G ++A++ S
Sbjct: 357 QPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDN-GGGDNIANMVS-- 413
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTC 488
A+ G + +D ++ +KP +F KA + ++K + A +YRAC C
Sbjct: 414 ---ARTGGGNFSTDWMTFKDARERNLGSGDKPDYFQCKAVVHIVKQENA-FYRACPQTDC 469
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
NKKV D Y CE C R ++ + D + W++ FNE E+++G ++ E
Sbjct: 470 NKKVVDEGNDQYRCERCNALYPNFKYRLLVNMSIGDWTSNRWVTCFNEIGEQLLGHTSQE 529
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
+ E D + + + H+ ++ + Y + R ++TV++ AP++ +K
Sbjct: 530 VGEALEN--DAAKAEQIFSSLNFTSHIFKLRCKNESYGDTTRNKLTVQSAAPINHKEYNK 587
Query: 609 FLLEEI 614
+LL+E+
Sbjct: 588 YLLKEL 593
>gi|303391020|ref|XP_003073740.1| DNA replication factor A protein 1 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302888|gb|ADM12380.1| DNA replication factor A protein 1 [Encephalitozoon intestinalis
ATCC 50506]
Length = 572
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 292/583 (50%), Gaps = 61/583 (10%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY N SDG +K I S L++ G + LIR +++ Y+ + + +
Sbjct: 43 RYRVNLSDGVHYMKGIFSSELTAHFEKGLVSRYSLIRPGRFSVRS--KDGSVYIYIQEIQ 100
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQED---EVKKDGPGIVLKPKQEMVAKSAAQILRD 157
+EI V F Q + + DG K E K + ++D
Sbjct: 101 EYEDC-NVEIGKPVNISTGNASFNDNQLSPGIQKRVDGGNQHGKALDEEDKKRVKKDIKD 159
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT 217
+ A + LNP+ W IK RV KG++R + N +GEG VFN E++
Sbjct: 160 EGEFTA-------------INMLNPFHNKWMIKGRVVLKGDIRRFSNQKGEGKVFNFEIS 206
Query: 218 DEDGT-QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D GT Q++ F++ F+ ++GKVY +S+GT+++ANKQ+ T DYE+ L++NSE
Sbjct: 207 D--GTAQVKIICFSDCVDIFFPIVEVGKVYSVSKGTVKMANKQYSTNPFDYEIILDKNSE 264
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNV-SPTMSIRRKSNNEMVP 335
V V++ + P+ FNF+ + +L G D+IGVV+ V +P+ + R + NE++
Sbjct: 265 VRCTVDDGS--PRYFFNFIKLSDLSL---GNAYCDVIGVVREVYAPSTVMVRSTQNELL- 318
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KRDI + DE+ +V ++LW A EL + + ++ +KS+KV +F GIS+ST G
Sbjct: 319 KRDIILVDESG-SVRLTLWGPKA-----EL--DIEGGVVLGLKSVKVSEFNGISISTTGG 370
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
S V+++PD+PEA +L WY+S GK +A L + + R + + N
Sbjct: 371 SQVVINPDIPEAHELAGWYQSTGKDMQVA--------LPRKEEK-----RRLIQEVKEN- 416
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACK--TCNKKVTDALGSGYWCEGCQKNDEECS 513
+ + +I+ + +K D A+WY +CK CNKKV Y CE C E+C+
Sbjct: 417 -----ELAYSTIQGTVMFLKED-ALWYTSCKGEGCNKKVVMEDSGNYRCERCNMTYEDCN 470
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RY++ + D +G+ W+S+F+E A G A E+ + + Q +K + +
Sbjct: 471 YRYMVTMHLGDFTGQVWLSLFDEAAASFFGIPAQEMKRMSEE--SPAELQALIKGMYFKE 528
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+L R+ Q YN+E R R + + +P+D ESK LL+ I K
Sbjct: 529 YLFRIKSKQDSYNDEIRMRYSGLSSSPLDIRKESKRLLDAIEK 571
>gi|149248590|ref|XP_001528682.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448636|gb|EDK43024.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 658
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 249/465 (53%), Gaps = 36/465 (7%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R+ P+ +L+PYQ NWTI+ RV+ KG +RT+ NA+GEG VF+V DE +I+A+ FNE
Sbjct: 202 RISPIETLSPYQNNWTIRARVSYKGELRTWSNAKGEGKVFSVNFLDE-SDEIKASAFNET 260
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A K Y+ + GKVYYIS+ + A K+F + + YE+ L ++SE+ E +E+ +P+ F
Sbjct: 261 AEKAYNILEEGKVYYISKAKVAAARKKFNNLTHPYELQLEKDSEITECFDESN-VPKLNF 319
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NFV +D++ + ++ +VD+IG ++ V+P I KS + +RDIT+ DE+ V +
Sbjct: 320 NFVKLDQI-QNLDANAIVDVIGALKVVNPPFQITAKSTGKAFDRRDITIVDESGFAVDIG 378
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LWN+ A + E + ++A K KV DF G +LS +++ +P +PE+ LK
Sbjct: 379 LWNQTAADFAVE------EGSVIAFKGCKVSDFNGRTLSLTQSGSLIANPGIPESYHLKG 432
Query: 413 WYESEGKGTSMASIGSGLGSLAKN-GARSMYSDRVSLTHITS---NPSLGDEKPVFFSIK 468
WY++ G + S+ + G+ + N ++ R ++ + G EK +FS K
Sbjct: 433 WYDNIGVKENYKSLKTESGAGSNNLSVMERFAQRKMISQVEDENIGGQNGGEKLEYFSTK 492
Query: 469 AYISLIKPDQAMWYRACKT-------------------CNKKVTDALGSGYWCEGCQKND 509
A +S KP+ Y AC CNKK+ + CE C
Sbjct: 493 ASLSYAKPEN-FAYPACPNILSQSGDASLSGAGARQNPCNKKLVQ-YDDKWRCERCNMEF 550
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
+ + RYI+ + D SG+ W+++F+E+A++++G A+EL EL + + N+ +
Sbjct: 551 DRPTWRYILNCGIMDASGQIWVTLFDEQAKKLLGMEANELVELSQE--NQNAAAEVIHRN 608
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ R+ Q +N++ + R + +D+ AE +L +EI
Sbjct: 609 YFREFNFRIRAKQDTFNDQLKIRYQCMGLTDIDYTAECDYLCKEI 653
>gi|112983132|ref|NP_001036938.1| replication protein A1 [Bombyx mori]
gi|55700848|dbj|BAD69789.1| Replication protein A large subunit [Bombyx mori]
Length = 598
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/626 (27%), Positives = 310/626 (49%), Gaps = 48/626 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL-----TGNRYMFNASDGKKRLK- 54
M +S A+ TI+ + D+ ++Q+L K G+RY SDGK
Sbjct: 1 MSYNLSEGALETIMKGGNYDAP------IIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSF 54
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYA---LNEIPTKSEKYLIVTKCEVVSPALEMEIK 111
A+L + L+ ++SG + + +I++ + L + ++ +I+ +++ ++ K
Sbjct: 55 AMLATQLNIMLLSGELTDYSVIQVDQFVTTLLKNVGKGEKRVIIILALTIIANGRDVRHK 114
Query: 112 IEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMT 171
I +P E+ P +PK V + + N+ + +
Sbjct: 115 IGNP--------QPWSEEATSAQRP----EPKPAPVTPKFTAKVEPKAANLD--SSMLSV 160
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
+ +P+ SL+PYQ W I+ RV SK +RT+ NA+GE +F++ DE G +I+AT F
Sbjct: 161 KMTNPISSLSPYQNKWVIRARVMSKTPIRTWSNAKGERKLFSMYPCDETG-EIRATAFKN 219
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
FYD Q+ KVYYISR ++ ANK+F T++NDYEM + V E V + + +P +
Sbjct: 220 ECDTFYDMIQVDKVYYISRCAIKTANKKFTTLKNDYEMTFTAETVVGEYVGDESAVPTVQ 279
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
++F+PI E+ T L+D+I V ++ S + KS +++ KR++ + D + VT+
Sbjct: 280 YDFLPISEIANKETET-LIDLIDVCKSASDVQELTAKSTGKLLKKREVMLVDASGGAVTL 338
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKL 410
+LW A + +PI+A+K ++ +F G SLS L + + ++PD+PEA KL
Sbjct: 339 TLWGNEAEKF------EGNTNPILAVKGARLTEFNGSKSLSCLSSTMLRLNPDVPEAHKL 392
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
+ WY++ G + +I + G+ ++ +S + S EK ++S+
Sbjct: 393 RGWYDNGGADADIVNISAKSGNFTGGS-----NEWISFSEAESRQLGTGEKGDYYSLLGV 447
Query: 471 ISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
++ + A+ Y+AC + CNKK+ D + CE C + R ++ A V D +G+
Sbjct: 448 LTFTFSENAV-YKACPQEQCNKKLVDQENGLFRCEKCNREYPNYKHRILLAANVSDPTGD 506
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
+++FNE AE ++G SA+E+ L D N Y EV + + + + +N+E
Sbjct: 507 QRVTLFNEAAETMLGKSAEEIARLSEY--DKNEYNKIFDEVKFKTFVFKFRTKMENFNDE 564
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEI 614
R + TV V PVD+ LL+ I
Sbjct: 565 SRLKTTVVNVQPVDYKDGIARLLKNI 590
>gi|219123923|ref|XP_002182265.1| replication protein a large 70 kD subunit [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217406226|gb|EEC46166.1| replication protein a large 70 kD subunit [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 606
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 191/630 (30%), Positives = 312/630 (49%), Gaps = 79/630 (12%)
Query: 29 VVQVLDLKLTGN-----RYMFNASDGKKRLKAILPSNLSS----------------EVIS 67
++QVLD K RY SDGK ++ +L + L+ + +S
Sbjct: 13 ILQVLDTKQVPGPQGSVRYRIVLSDGKHYIQGMLATQLNHMIATNLIGANTIVQVEQFMS 72
Query: 68 GNIQNKGLIRLLD-YALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPK 126
++++ +I LL+ +AL P++ + K ++ +P V ++G P
Sbjct: 73 NRVKDRTVIILLNVHALRNEPSRIGDPQDIEKAQIATPGTNYATGSSVPPVKTG---SPN 129
Query: 127 QEDEVKKDGPGIVLKPKQEM-VAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQG 185
GP P V S A I+RD N P ++ +LN Y
Sbjct: 130 -----PYGGPS--RNPHHASPVRSSHAPIVRD-TVNGTPITNIS---------NLNMYAN 172
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ-IQATMFNEAARKFYDRFQLGK 244
WTI+ RVTSK ++RT+ NA+GEG +F+VEL D+ TQ ++AT F EA KFY Q+G
Sbjct: 173 KWTIQARVTSKSDIRTWSNAKGEGSLFSVELLDQ--TQDVRATFFKEAVDKFYSFLQIGS 230
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV-PIDELGRY 303
VY S G L+VAN Q+ T Q+++E+ ++NSE+ A N+ I + + F+ I L R
Sbjct: 231 VYTFSGGRLKVANAQYNTCQSNFEITFDQNSEIHLA-NDDGNIQRQHYEFIDSIAGLERT 289
Query: 304 VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
T +VD++ VVQ V +I K + + + K D+T+ D + +T++LW + A +
Sbjct: 290 EPNT-MVDLLAVVQAVGEVATIVSKKSGQELTKCDLTLIDTSATQITLTLWGDKAASA-- 346
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM 423
L + ++ P+VAI+ +V D+ G SLS G ++ +PD+P+ L++W+ ++ T+
Sbjct: 347 --LTDYNQQPVVAIRRARVSDYGGRSLSLSG--SIETNPDIPQTAPLQTWWRTQ---TAN 399
Query: 424 ASIGSGLGSLAKNGARSMYS--DRVSLTHITSNPSLG--DEKPVFFSIKAYISLIKPDQ- 478
+ S + GA M S R ++ I +N +LG +KP + + KA +S +K D+
Sbjct: 400 GGVTGKSLSATRGGAGVMESLEQRQTIADIKNN-NLGYAGDKPDWLTFKATVSFLKKDKE 458
Query: 479 -AMWYRACKTCNK------KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
WY AC + KVT ++C+ CQ + C R+I V D + W+
Sbjct: 459 GGSWYPACANAGEPCKNRYKVTQTTDGNWYCDKCQGSFPTCVRRWIFSGVVEDDTSSTWV 518
Query: 532 SIFNEEAERII-GCSAD----ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
S FNE+AE ++ G +AD E + + +SY K W+ + V + N
Sbjct: 519 SFFNEQAETLLAGATADQVYAETYQDQQDQDAYDSYFAKANHTEWI---FKCKVKNEMVN 575
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + +V A+ PVDFA ES+ LL ++K
Sbjct: 576 EESRVKTSVVAMQPVDFAKESRDLLSALAK 605
>gi|159491651|ref|XP_001703773.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
gi|158270454|gb|EDO96299.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
Length = 451
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 237/436 (54%), Gaps = 22/436 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R P+ +LNPY W I+ RVTSKG +R + N RGEG VF+ +L D+DG +I+AT F
Sbjct: 20 RFIPISALNPYTARWAIRARVTSKGELRRWTNVRGEGKVFSFDLLDKDGGEIRATAFGAE 79
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN--ETAFIPQT 290
A KF++ + G +Y IS+ +L QF + YE+ L+ NS VE ET+ IP
Sbjct: 80 ADKFFEVVEAGAIYQISKASLTNKRPQFNHTNHQYEIKLDRNSMVERVAEDPETSQIPTI 139
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+NF I +L GT +VDIIGVV+ P +I R++ E KR + V D++ R++
Sbjct: 140 SYNFRRITDLETAEAGT-VVDIIGVVETCEPWQTITRRTGEE-TQKRSMVVRDDSGRSIE 197
Query: 351 VSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEA 407
V+LW L N G ++ + P++A K+L+VGD+ G +LST+G S + + P DLP A
Sbjct: 198 VTLWGALVNNPGDQIEQMVRGGGRPVLAAKALRVGDYNGKTLSTVGASALRLDPMDLPAA 257
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-KPVFFS 466
++++ WY GK ++ S+ S A G +DR ++ + +LG K + +
Sbjct: 258 QRVRGWYNGGGKAQAVNSL-----SAAGGGGGGGRTDRRTVLSAIKDENLGRSGKADWVN 312
Query: 467 IKAYISLIKPD-QAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
+ A + +IK A+ Y +C + C KK+ D G + C+ CQ + E + RY++
Sbjct: 313 VSAVLDMIKGGASAVVYPSCPHDFNGRPCQKKMMDVGGGNWNCDRCQFSTENPAWRYLVS 372
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
CD + + ++ F + + I G SA E+ + ++ + + + + P R+
Sbjct: 373 LSACDHTAKQSLTAFGDAGDAIFGRSATEVRNM--EVDRPQEFDRLAESIRFTPFFFRLK 430
Query: 580 VAQQEYNNEKRQRVTV 595
VA+ YN+E+R +V++
Sbjct: 431 VAEDNYNDEQRIKVSI 446
>gi|392871535|gb|EJB12180.1| replication factor-a protein 1 (rpa1), variant [Coccidioides
immitis RS]
Length = 572
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 182/605 (30%), Positives = 292/605 (48%), Gaps = 48/605 (7%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------NRYMFNASDGKKRLK 54
M ++ A+S I D+ + + +VQ L +KL +RY SD ++
Sbjct: 1 MANNITVGALSAIFD----DTKEKVAKPIVQCLHVKLLSSPSGGPDRYRAVFSDISNFVQ 56
Query: 55 AILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEV 114
+L S+L+ V +G ++ ++L + N + K ++ LIV +V+ E E +
Sbjct: 57 TMLASSLNDLVNNGALRRGCFVQLKSFQANFV--KGKRILIVLDLDVLEDLGECERIGDP 114
Query: 115 KSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVA--KSAAQILRDQNGN---MAPAARLA 169
K E+ + EV+K P + V S AQ R Q MAP
Sbjct: 115 KPLETKVA-------EVEKPTPTAISSDGFYGVVSEHSVAQPQRHQRATVPTMAPTHA-- 165
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
++P+ +L+PY WTIK R T+K ++ + N GEG +F+V L D+ G +I+AT F
Sbjct: 166 ---NIYPIEALSPYSHKWTIKARCTNKSAIKKWYNRNGEGRLFSVNLLDDSG-EIRATAF 221
Query: 230 NEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
E Y F+ G VYYIS +++A ++F V NDYE+ ++ +E A + +P
Sbjct: 222 KEQCDLLYPLFEEGSVYYISSPCRVQMAKREFSNVNNDYELTFERDTVIERAEDHED-VP 280
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q +FNF I L GT +D++GV++ V P + KS + KR++ + D+T +
Sbjct: 281 QMRFNFTSIGHLHSVEKGTT-IDVLGVLKTVEPVAEVPSKSTGKRYTKRELMLVDDTGYS 339
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAK 408
V +++W +AT+ + +VA K +KV DF G SLS L T+ PD+ EA
Sbjct: 340 VPLTIWGGMATSF------DVMPDSVVAFKGVKVSDFGGRSLSLLNSGTITSDPDIEEAH 393
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARS-MYSDRVSLTHITSNPSLGDEKPVFFSI 467
KLK WY+++GK A+ + G R +Y ++ + N EKP +FS+
Sbjct: 394 KLKGWYDAQGKFDQFATHALSENAAISTGTRQDIYK---AIVEVRDNQLGMTEKPDYFSL 450
Query: 468 KAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
+A + IK D + Y AC + CNKKV + CE C+K+ RYI+ A V D
Sbjct: 451 RATVVFIKQD-TICYPACVQERCNKKVVQVDPEQWLCEHCEKSSLRPEYRYILSANVSDH 509
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G+ W++ F+E I+G A+ L ELK DD + + T L+ +
Sbjct: 510 TGQLWLNCFDEVGRAIMGMPANVLMELKE--SDDKAASEAILHATCQMWNLKCKAKLDNF 567
Query: 586 NNEKR 590
N+ R
Sbjct: 568 QNQPR 572
>gi|159129170|gb|EDP54284.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus A1163]
Length = 529
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 289/552 (52%), Gaps = 45/552 (8%)
Query: 75 LIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKD 134
+RL + N + K +K LI+ EV+ E E E + E+ + +EDE
Sbjct: 7 FVRLKSFQANSV--KGKKILIILDLEVLQELGEAEKIGEPRPLENKL-----EEDE---- 55
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNGNMAP---AARLAMTRR---VHPLVSLNPYQGNWT 188
KP+ ++ + QN P AR ++T ++P+ +++PY WT
Sbjct: 56 ------KPQPTTISGGGFYGSKVQNQRGEPRVQPARSSLTSSHATIYPIEAISPYSHKWT 109
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
IK R TSK ++T+ N EG +F+V L D+ G +I+AT FNE YD F G VYYI
Sbjct: 110 IKARCTSKSAIKTWHNRNSEGRLFSVNLLDDSG-EIRATGFNEQCDLLYDVFHEGGVYYI 168
Query: 249 SRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGT 307
S +++A KQF + NDYE+ +++ VE+A +++ +PQ +FNF + +L + V
Sbjct: 169 SSPCRVQIAKKQFTNLNNDYELTFEKDTVVEKAEDQSD-VPQVRFNFTTVGDL-QSVEKD 226
Query: 308 ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD 367
+DIIGV+++V T I K+ ++ KR++T+ D + +V +++W A N
Sbjct: 227 TTIDIIGVLKDVGETTQIVSKTTSKPYDKRELTLVDSSGFSVRLTIWGSTALNF------ 280
Query: 368 NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
NA ++A K +KV DF G SLS L ++ V PD+ EA +LK WY+++G+ + AS
Sbjct: 281 NATPESVIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGRHETFASHA 340
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC- 485
+ S A + A+ + D + LG E V+FS+K + IK D M Y AC
Sbjct: 341 TM--SNASSSAKRL--DHLKTIAQVREEQLGMSEDAVYFSLKGTVIYIKQDN-MCYPACL 395
Query: 486 -KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG 543
+ CNKKVT+ L G W CE C K RYIM+ V D +G+ W+S F+E ++++G
Sbjct: 396 SEGCNKKVTE-LDPGQWRCESCDKTHPRPEYRYIMLINVSDHTGQLWLSCFDEVGKQLMG 454
Query: 544 CSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDF 603
SAD+L +L+ Q G+ + + +E R + +++R R V PV++
Sbjct: 455 TSADQLMDLR-QNGEKAAGDI-FQEANCRTWNFRCRAKLDHFGDQQRIRYQVSTAKPVNY 512
Query: 604 AAESKFLLEEIS 615
+ E+ L+ I+
Sbjct: 513 SEEASRLMALIN 524
>gi|390597691|gb|EIN07090.1| replication factor-a protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 621
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 177/596 (29%), Positives = 297/596 (49%), Gaps = 41/596 (6%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+RY SDG+ ++A+L + L+ + I ++ L + N + E+ LI+
Sbjct: 50 DRYRIIMSDGEHFVQAMLATQLNHLIEDETIGKHSIVVLDRFTANVV---QERRLIIIL- 105
Query: 100 EVVSPALEMEIKIEVKSDESGIIF--KPKQEDEVK------KDGPGIVLKPKQEMVAKSA 151
++P L++ KI D S I +P + +V P P
Sbjct: 106 -DLTPVLKIAEKI---GDPSAITLSDQPTTDGDVPMAETAPTPAPARASAPSVSNTVPPR 161
Query: 152 AQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV 211
+ R GN + + A+ P+ L+PYQ NWTIK RVT K ++RT+ N RGEG +
Sbjct: 162 SAPQRSTPGNKSGGRQSAIL----PIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKL 217
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL 271
FNV L DE G +I+ T FN+ Y++FQ GKVY+ISR + +A K+F + NDYE++
Sbjct: 218 FNVTLMDESG-EIRGTGFNDVVDALYEKFQEGKVYFISRARVNLAKKKFSNLANDYELSF 276
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
N+EVEE ++ + +P K+ F P+ EL + + D++GVV+ +I K+ +
Sbjct: 277 ERNTEVEECLDPSG-VPAVKYEFTPLAELEQKEKDS-TCDVLGVVKEDGGVATIVSKTTH 334
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLS 391
+ + KR++T+ D + +V ++LW + A E ++ D +P+VA K ++VGDF G SLS
Sbjct: 335 KELLKRELTLVDSSGYSVRLTLWGKQA-----EAWNHTD-NPVVAFKGVRVGDFGGRSLS 388
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI 451
+ ST+ + PD+PE L+ WY+ G S S S L A +R + +
Sbjct: 389 MVSSSTMQIEPDIPEVHHLRGWYDGVGNSQSFQS-HSFLSGGAGGAGMGGTFNRAEVKTL 447
Query: 452 --TSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGC 505
+ LG ++P F +A + ++ + + Y AC + CNKKV + G W CE C
Sbjct: 448 GEIRDLQLGSSDRPDNFFAQATVMHVR-GENIAYPACPKEGCNKKVVQ-IPDGRWRCEKC 505
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQM 564
++ + RYI+ V D +G+AW FN+ + SA EL ++K + D+ +
Sbjct: 506 DESYDAPEYRYIVSMAVADHTGQAWFQGFNDVGLAVFNNMSATELVQIKER--DEAKFNG 563
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
L + Q + + R R + + P+D+AA++ +L + + +H
Sbjct: 564 ILHKAGCQTFNFSCRAKQDTFGDSTRVRYGISRITPLDYAADAAYLRDLLKTPWAH 619
>gi|195444358|ref|XP_002069830.1| GK11360 [Drosophila willistoni]
gi|194165915|gb|EDW80816.1| GK11360 [Drosophila willistoni]
Length = 605
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 245/446 (54%), Gaps = 20/446 (4%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
HP+ SL+PYQ W IK RVT+K +RT+ N RGEG +F+++L DE G +I+AT F E
Sbjct: 169 THPIASLSPYQNKWVIKARVTAKTAIRTWSNPRGEGKLFSMDLMDESG-EIRATAFKEQC 227
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
KFYD Q+ VYY S+ L+ ANKQ+ ++NDYEM + V+ +E IP+ K++
Sbjct: 228 DKFYDLIQVDGVYYFSKCQLKPANKQYSQLKNDYEMTFTGETMVQMCEDEEDSIPEIKYD 287
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
VPI ++ N VD IG+ + V + ++ N+ KRD+T+ D + ++++L
Sbjct: 288 LVPISQVSNMENKAA-VDTIGICKEVGELQTFTSRTTNKEFKKRDLTLVDMSNSAISLTL 346
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKLKS 412
W + A N + P++ +K ++ +F G +LG +++ ++PD+PEA KL+
Sbjct: 347 WGDDAVNF------DGHVQPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRG 400
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
W+++ G G ++A++ S A+ G + +D ++L +KP +F KA +
Sbjct: 401 WFDN-GGGDNIANMVS-----ARTGGGTFSADWLTLKDARERNLGSGDKPDYFQCKAVVH 454
Query: 473 LIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
++K + A +Y+AC CNKKV D Y CE C ++ R ++ + D + W
Sbjct: 455 IVKQENA-FYKACPQAECNKKVVDEGNDRYRCERCNQDFPNFKYRLLINLSIGDWTSNRW 513
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
++ F+E E+++ +A E+ E D + + + H+ ++ + Y + R
Sbjct: 514 VTCFSEIGEQLLKHTAQEVGEALEN--DPPKAEQMFSGMNFSAHIFKLRCKNEVYGDMTR 571
Query: 591 QRVTVRAVAPVDFAAESKFLLEEISK 616
++TV++V+P+++ +K L++E+ +
Sbjct: 572 NKLTVQSVSPINYKDYNKHLIKELQQ 597
>gi|452981313|gb|EME81073.1| hypothetical protein MYCFIDRAFT_29007 [Pseudocercospora fijiensis
CIRAD86]
Length = 621
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 299/589 (50%), Gaps = 40/589 (6%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
R +FN D ++ +L S + + G+++ + RL Y N + K + LI+ +
Sbjct: 46 RVVFN--DTVNFIQGMLSSQSNHLITDGHLKKGSVCRLTQYQANFV--KDKHILIIMNLD 101
Query: 101 VVSPALEME-----IKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQIL 155
V+ E + + ++ E+ KP+ + + G + Q + +
Sbjct: 102 VLHEYGEQDKLGSPVALDAAKPEAQEDVKPQPGNIAGNNFYGQKPQQAQLQQQQQQRSLP 161
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
NG A +T P+ +++PYQ WTIK R TSKG+++T+ N GEG +F+
Sbjct: 162 SRTNGASHGGAHGNIT----PIEAVSPYQHKWTIKARCTSKGDIKTWHNKNGEGKLFSAN 217
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNEN 274
DE ++I+ATMFNE ++YD Q G VYYIS +++A KQF + NDYE+ +
Sbjct: 218 FLDET-SEIRATMFNEQCDQWYDVLQEGSVYYISSPCKVQLAKKQFSNLPNDYELTFERD 276
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
++VE+A +E +PQ K++F ++ L + V + D+IGV+ +V I K+ ++
Sbjct: 277 TQVEKADDEG--VPQVKYSFTNLESL-QNVEKDTVTDVIGVLADVGEVNEIVSKTTSKPY 333
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLST 392
KR++T+ D+T V +++W ++A ++ D SP +VA K +KV DF G SLS
Sbjct: 334 SKRELTLVDDTGYNVRLTIWGKVA--------ESFDASPEAVVAFKGVKVSDFGGRSLSL 385
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL-AKNGARSMYSDRVSLTHI 451
L ++ + PD+ EA KLK WY++ G T AS + + ++ A +G R D
Sbjct: 386 LSSGSMNIDPDIDEAYKLKGWYQANGSTTQFASHANTMATVGATSGGRK---DDTKTIQQ 442
Query: 452 TSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT-----CNKKVTDALGSGYWCEGC 505
+ +LG + +F++KA I IK D Y AC+T CNKKVT+ + CE C
Sbjct: 443 VRDENLGMTDATDWFTLKATIVYIKQDNFA-YAACQTTDPQPCNKKVTEVDNGSWRCEKC 501
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK 565
+KN + RYIM V D +G+ W+S F++ + ++G A+EL K + GD+
Sbjct: 502 EKNWDAPKYRYIMSVNVSDHTGQLWLSCFDDVGQAMLGMPANELMVAKEE-GDEKRVTDA 560
Query: 566 LKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ + + Y +++R R V+ +DF ESK L + I
Sbjct: 561 FADANCKSFVFKCRCKMDNYQDQQRVRYQVQYANNIDFVRESKRLADII 609
>gi|396498991|ref|XP_003845364.1| similar to replication protein A 70 kDa DNA-binding subunit
[Leptosphaeria maculans JN3]
gi|312221945|emb|CBY01885.1| similar to replication protein A 70 kDa DNA-binding subunit
[Leptosphaeria maculans JN3]
Length = 611
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 296/588 (50%), Gaps = 46/588 (7%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
R+ SD + ++ ++ + + V SG ++ ++RLL Y N K + LI+ + E
Sbjct: 47 RFRVVLSDIRNFIQTMIATTANDIVTSGQLKKGSIVRLLKY--NPQRVKDKNILIIMELE 104
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVL-------KPKQEMVAKSAAQ 153
V+S E+E I +P+ + P + KP A +
Sbjct: 105 VLSEYGELEK-----------IGQPEALETRADTQPAAISGNNFYGNKPAPAAQAPQRSL 153
Query: 154 ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ N + L +P+ SL+PY WTI+ R TSK +M+ + NA+G G +F+
Sbjct: 154 PVHQSNPGTSSHPHL------YPIESLSPYAHKWTIRARCTSKSDMKEWHNAKGSGKLFS 207
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLN 272
V L D+ G +I+AT F E A K + F+ G VYYIS + +A K F + NDYE+
Sbjct: 208 VNLLDDTG-EIRATAFTEVADKLFPVFEEGVVYYISAPCRVTLAKKNFSNLPNDYELQFE 266
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++EVE+A ++ PQ +FNF I +L V +D IGV++ V +I K+ N+
Sbjct: 267 RDTEVEKAEDQEN-KPQIRFNFTKIGDLDS-VEKDSTIDTIGVLKEVGEVATITSKNTNK 324
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
KR++T+AD+++ +V +++W + A + L I+A K +KV DF G SLS
Sbjct: 325 DFSKRELTLADDSQTSVRLTIWGKTAESFEAPL------ESILAFKGVKVSDFGGRSLSL 378
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT 452
L +++V PD+ EA KL+ W+ + G+ + S +LA + S ++ ++ I
Sbjct: 379 LSSGSMMVDPDIDEAHKLRGWFNAVGQNATF----STHNNLASSSGGSKNESKL-ISQIM 433
Query: 453 SNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDE 510
S + P + S++A + +K + + Y AC T CNKKV + +WCE CQK
Sbjct: 434 EEESYLQDTPTYLSLRASVVYVK-NTTVAYPACSTPGCNKKVIEENPGAWWCEKCQKTYP 492
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNS--YQMKLKE 568
E RY++ V D +G W+S F+E + I+G SA+E ++K+ D+ + + ++E
Sbjct: 493 EPLYRYVLSVNVADHTGTLWLSCFDEAGQTIVGMSANEAMKMKTDDEDNGTQNFLTAMQE 552
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
T RV + Y ++ + R V + P+++A E+ L + I +
Sbjct: 553 ATCKTFNFRVRGKMETYQDQPKPRYQVLNLYPLNYAQEANKLAQLIKQ 600
>gi|448514363|ref|XP_003867094.1| Rfa1 DNA replication factor A [Candida orthopsilosis Co 90-125]
gi|380351432|emb|CCG21656.1| Rfa1 DNA replication factor A [Candida orthopsilosis Co 90-125]
Length = 628
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/626 (27%), Positives = 311/626 (49%), Gaps = 68/626 (10%)
Query: 28 IVVQVLDLKLTGN-----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
+V QV +LK +Y SDG + I+ E + ++N R
Sbjct: 27 LVFQVTNLKSVNTMNNSKKYRILLSDGVYSTQGII-----EEKCTPYLENNNWSRYCTIQ 81
Query: 83 LNEIPT--KSEKYLIVTKCEVVSPALE--------MEIKIEVKSDESGIIFKPKQED-EV 131
+N T ++ +LI+ E+++P E ++ +E+ + KQ +
Sbjct: 82 VNAFRTLATAKHFLIIEDVEILTPTGEKPTTPLINIDTYFAEHPEEAALTVTKKQNSVDE 141
Query: 132 KKDGPGIVLKPKQEMVAKSAA------QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQG 185
K+ PG Q ++A Q + G APA R+ P+ +++PYQ
Sbjct: 142 KEQTPGTTPPVAQSTATAASAAPSIKQQYPPSKAGQAAPA-------RISPIETISPYQN 194
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
WTIK RV+ KG +R++ NA+GEG VF+V DE +I+A+ FNE+A + Y+ + GKV
Sbjct: 195 TWTIKARVSYKGELRSWSNAKGEGKVFSVNFLDE-SDEIKASAFNESAERAYNLLEEGKV 253
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
Y+IS+ + A K+F + + YE+ L +++E+ E +E+ +P+ FNFV +D++ + +
Sbjct: 254 YFISKAKVGAARKKFNNLTHPYELTLEKDTEITECFDESD-VPKLNFNFVKLDKV-QNLE 311
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
++D++G ++ V+P I KS + +RDIT+ DET V V LWN A + E
Sbjct: 312 PNAIIDVLGALKIVNPPFQITAKSTGKAFDRRDITIVDETGFAVDVGLWNNTAVDFSVE- 370
Query: 366 LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS 425
+ ++A K KV DF G SLS +++ +P PE+ +LK W+++ G + S
Sbjct: 371 -----EGTVIAFKGCKVSDFNGRSLSLTQAGSIVPNPGTPESYQLKGWFDNIGVKENFKS 425
Query: 426 IGSGLGSLAKNGARSM--YSDRVSLTHI-TSNPSLGDEKPVFFSIKAYISLIKPDQAMWY 482
+ + N + S+ ++R ++ + N +L E+ +F+IKA S KP+ Y
Sbjct: 426 MKT-----ETNASSSIDRLANRKTIAQVEEENNNLDSEQSGYFTIKACFSFTKPEN-FAY 479
Query: 483 RACKT--------------CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
AC CNKK+ + + CE C + +E + RYI+ + D +G+
Sbjct: 480 PACTNIIANTTDSTKPGLPCNKKLA-PVNDKWRCERCDLSYDEPTYRYILYISITDATGQ 538
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W ++F+E+A++++G A+EL ++ ++ + + + + R+ V Q +N++
Sbjct: 539 LWTTLFDEQAKKLLGIDANELMKMSNE-NEKMVVAEYISRAYFKEYNFRLRVKQDTFNDQ 597
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEI 614
+ R ++ +D+ E +FL E+
Sbjct: 598 LKLRYQCVGLSDIDYNTECEFLCSEL 623
>gi|320591361|gb|EFX03800.1| replication protein a DNA-binding subunit [Grosmannia clavigera
kw1407]
Length = 631
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/644 (28%), Positives = 312/644 (48%), Gaps = 50/644 (7%)
Query: 2 DKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG------------NRYMFNASDG 49
++ ++ A++ I S+P + + P V+Q L +K G RY SD
Sbjct: 6 ERQITRGALAAIFSDPE-SARTQFPVPVLQCLQIKPLGPPPNGAAGAAGSERYRVVLSDV 64
Query: 50 KKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEME 109
++ +L + + V G + ++R+ Y N + K + LI+ +V+ +L
Sbjct: 65 DNFVQTMLATQGNHVVHDGKLVRGSIVRIKAYQANAV--KGKNILIILDLDVIE-SLGAH 121
Query: 110 IKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQ------NGN-- 161
KI + I G K+E K Q +R NGN
Sbjct: 122 DKIGEPTPVDSSIQPVAAATSTNIGGTNFYGVKKEEPDTK---QGIRGSIGAAGNNGNST 178
Query: 162 -----MAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
+ A ++P+ L+PY WTIK RVTSK +RT+ + GEG +F+V L
Sbjct: 179 GKPSGTSYGGSNAAHPNIYPIEGLSPYSHKWTIKARVTSKSEIRTWHKSSGEGKLFSVNL 238
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENS 275
DE G +I+AT FNE ++YD Q G VYYIS + +A KQF + NDYE++ ++
Sbjct: 239 LDESG-EIKATGFNEQCDQYYDLLQEGSVYYISSPCRVNIAKKQFSNLPNDYELSFERDT 297
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
++E+A ++++ +PQ ++ F + L + V ++D+IGV+++V SI KS+ +
Sbjct: 298 QIEKAEDQSS-VPQVRYAFCTLQAL-QSVEKDAVIDVIGVLRDVGEVSSITSKSSGKPYE 355
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KR++T+ D++ +V ++W + A +A ++A K ++V DF G SLS L
Sbjct: 356 KRELTLVDDSSFSVRTTIWGKTAVAF------DAKPESVIAFKGVRVSDFGGRSLSLLQS 409
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
+ + PD+ EA LK WY++ G+ + +S GA S ++V +
Sbjct: 410 GVMSIDPDITEAHHLKGWYDAAGRSENFSS--HNSMGGMGGGAGSGRPEQVKTIAQVRDE 467
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECS 513
++G ++ +F++KA I IK + Y AC + C+KKV + + CE C N +
Sbjct: 468 NIGMDETAYFTLKATIVFIK-QETFAYPACSSDGCSKKVVSSSDGTWRCEKCDMNHPQAL 526
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGC-SADELNELKSQLGDDNSYQMKLKEVTWV 572
RY M+ V D +G+ W++ F++ I+G SADEL EL+ + DD ++ + ++
Sbjct: 527 YRYTMMLNVNDHTGQLWLTCFDDVGRMIMGGRSADELTELREE--DDIAFGAEFEKANCR 584
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ RV + + +R R + P+DF +E L E I +
Sbjct: 585 KYSFRVRAKMDTFGDAQRIRYQIVNAHPLDFKSEGHKLAELIHQ 628
>gi|425772845|gb|EKV11231.1| hypothetical protein PDIP_56740 [Penicillium digitatum Pd1]
gi|425773582|gb|EKV11927.1| hypothetical protein PDIG_47360 [Penicillium digitatum PHI26]
Length = 1107
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 190/633 (30%), Positives = 302/633 (47%), Gaps = 62/633 (9%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILP 58
V+ A+S I P + E +VQ + +K RY SD ++ +L
Sbjct: 9 VTIGALSAIFDETKPQ----VREPIVQCVQIKALPAQPNQPERYRAVFSDIANYVQTMLA 64
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEI-----KIE 113
+ +S V G+++ +RL + N + K +K LI+ EV+ E E +E
Sbjct: 65 TQANSVVTDGSLRKGSFVRLKSFQSNSV--KGKKILIILNLEVLKELGEAEKIGEPKPLE 122
Query: 114 VKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR 173
VK++E + Q + +G N P + T
Sbjct: 123 VKAEEEEV----GQPTTISSNG----------FYGSKTGGAQAQPNSRAQPMSASMSTSS 168
Query: 174 VH----PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
H P+ +++PY WTIK R TSK +++T+ N GEG +F+V L D+ G +I+ T F
Sbjct: 169 AHATIYPIEAISPYSNKWTIKARCTSKSSIKTWHNKNGEGKLFSVNLLDDSG-EIRGTGF 227
Query: 230 NEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
N+ Y+ FQ G VYYIS +++A KQF + NDYE+ ++ VE+A E +P
Sbjct: 228 NDQCDMLYELFQEGSVYYISSPCRVQIAKKQFTNLNNDYELTFERDTIVEKA-EEQNDVP 286
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q +FNF + +L + V D+IGV+++V T I KS + KR++T+ D T +
Sbjct: 287 QIRFNFTTVADL-QTVEKDTTTDVIGVLKDVGETSQITSKSTGKPYDKRELTLVDNTGFS 345
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAK 408
V +++W A N + +VA K +KV DF G SLS L ++ V PD+ EA
Sbjct: 346 VRLTIWGASANNF------SVAPESVVAFKGVKVSDFGGRSLSLLSSGSMTVDPDIGEAH 399
Query: 409 KLKSWYESEGKG---TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVF 464
+L+ WY+++G+ TS AS+ + S K +DR LG E P +
Sbjct: 400 RLRGWYDAQGRSENFTSHASLSNATNSTGK-------TDRFKTVAQVREEQLGMSETPDY 452
Query: 465 FSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVAR 521
FS+KA + IK D Y AC + CNKKVT+ L G W CE C K + R+IM
Sbjct: 453 FSLKATVIYIKQDSTWCYPACLSENCNKKVTE-LDPGQWRCEMCDKTHLKPEYRFIMPIS 511
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
V D +G+ W+S F++ I+G SADEL +L+ D +++ + R
Sbjct: 512 VSDHTGQLWLSCFDDTGRNIMGMSADELMQLRED--DPSAFGEVFQGANCQTWSFRCRAK 569
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ +++R R V + ++++ E+ L + I
Sbjct: 570 IDNFGDQQRVRYQVSSSQAINYSDEASRLADII 602
>gi|295674419|ref|XP_002797755.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280405|gb|EEH35971.1| replication factor-A protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 603
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 307/616 (49%), Gaps = 40/616 (6%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS + E VVQ + +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSKPKVAEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLATQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG++ +RL + N + K ++ LIV E++ E KI D +
Sbjct: 68 HFVTSGHLVRGCFVRLKSFQANLV--KGKRILIVLDLEILDRLGVCEKKI---GDPQPLD 122
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
K +++D K P + S A Q +A ++P+ +L+P
Sbjct: 123 MKQEEQD---KSLPTTI---STNGFYGSRAPQQAPQQPAKRSSASTTAYANIYPIEALSP 176
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y F+
Sbjct: 177 YSHKWTIKARCTNKSEIKTWHNKNGEGRLFSVNLLDDSG-EIRATAFKDQCDALYGVFEE 235
Query: 243 GKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
G VYYIS +++A K F + N+YE+ +++ VE+A E +PQ +FNF I L
Sbjct: 236 GSVYYISSPCRVQIAKKAFSNLNNEYELTFEKDTVVEKA-EEQNDVPQIRFNFTNIANLQ 294
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
GT +D+IGV+++V + I K+ ++ KRD+T+ D T +V +++W A +
Sbjct: 295 TIEPGT-TIDVIGVLKDVGESSQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWGNAAKD- 352
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
D+ +S +VA K +KV DF G SLS L ++ V PD+ +A KLK WYE++G+
Sbjct: 353 ----FDSMPES-VVAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEDAHKLKGWYEAQGRSE 407
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAM 480
+ AS S G++ R+ ++ +LG EKP +FS+KA + +K D M
Sbjct: 408 TFASHESISGAVGSGDRRANSFKTIAQVQ---EENLGMSEKPDYFSLKATVVYVKQD-TM 463
Query: 481 WYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
Y AC T CNKKV + CE C ++ RYI+ VCD +G W+S F+E
Sbjct: 464 AYPACLTDKCNKKVLQDETGRWRCERCDQSFPRPEYRYILSVNVCDHTGALWLSCFDEVG 523
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
+ ++G SA+E+ ELK D+ +Y+ +++ + ++R R V +V
Sbjct: 524 KALLGISANEIMELKD--NDERAYEELVQKANCRAWNFNCRAKMDSFQEQQRVRYQVSSV 581
Query: 599 APVDFAAESKFLLEEI 614
+P+D+ ES L E I
Sbjct: 582 SPIDYTTESVRLAELI 597
>gi|70989823|ref|XP_749761.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
gi|66847392|gb|EAL87723.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
fumigatus Af293]
Length = 529
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 289/552 (52%), Gaps = 45/552 (8%)
Query: 75 LIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKD 134
+RL + N + K +K LI+ EV+ E E E + E+ + +EDE
Sbjct: 7 FVRLKSFQANSV--KGKKILIILDLEVLQELGEAEKIGEPRPLENKL-----EEDE---- 55
Query: 135 GPGIVLKPKQEMVAKSAAQILRDQNGNMAP---AARLAMTRR---VHPLVSLNPYQGNWT 188
KP+ ++ + QN P AR ++T ++P+ +++PY WT
Sbjct: 56 ------KPQPTTISGGGFYGSKVQNQRGEPRVQPARSSLTSSHATIYPIEAISPYSHKWT 109
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
IK R T+K ++T+ N EG +F+V L D+ G +I+AT FNE YD F G VYYI
Sbjct: 110 IKARCTTKSAIKTWHNRNSEGRLFSVNLLDDSG-EIRATGFNEQCDLLYDVFHEGGVYYI 168
Query: 249 SRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGT 307
S +++A KQF + NDYE+ +++ VE+A +++ +PQ +FNF + +L + V
Sbjct: 169 SSPCRVQIAKKQFTNLNNDYELTFEKDTVVEKAEDQSD-VPQVRFNFTTVGDL-QSVEKD 226
Query: 308 ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD 367
+DIIGV+++V T I K+ ++ KR++T+ D + +V +++W A N
Sbjct: 227 TTIDIIGVLKDVGETTQIVSKTTSKPYDKRELTLVDSSGFSVRLTIWGSTALNF------ 280
Query: 368 NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
NA ++A K +KV DF G SLS L ++ V PD+ EA +LK WY+++G+ + AS
Sbjct: 281 NATPESVIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGRHETFASHA 340
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC- 485
+ S A + A+ + D + LG E V+FS+K + IK D M Y AC
Sbjct: 341 TM--SNASSSAKRL--DHLKTIAQVREEQLGMSEDAVYFSLKGTVIYIKQDN-MCYPACL 395
Query: 486 -KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG 543
+ CNKKVT+ L G W CE C K RYIM+ V D +G+ W+S F+E ++++G
Sbjct: 396 SEGCNKKVTE-LDPGQWRCESCDKTHPRPEYRYIMLINVSDHTGQLWLSCFDEVGKQLMG 454
Query: 544 CSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDF 603
SAD+L +L+ Q G+ + + +E R + +++R R V PV++
Sbjct: 455 TSADQLMDLR-QNGEKAAGDI-FQEANCRTWNFRCRAKLDHFGDQQRIRYQVSTAKPVNY 512
Query: 604 AAESKFLLEEIS 615
+ E+ L+ I+
Sbjct: 513 SEEASRLMALIN 524
>gi|401827683|ref|XP_003888134.1| replication factor A protein 1 [Encephalitozoon hellem ATCC 50504]
gi|392999334|gb|AFM99153.1| replication factor A protein 1 [Encephalitozoon hellem ATCC 50504]
Length = 572
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 243/441 (55%), Gaps = 42/441 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT-QIQATMFNEAARKFYD 238
LNP+ W IK RV KG++R + N +GEG VFN EL+D GT Q++ F++ F+
Sbjct: 169 LNPFHNKWVIKGRVVVKGDIRRFTNQKGEGKVFNFELSD--GTAQVKIICFSDCVDIFFP 226
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
++GKVY +++GT+++ANKQ+ T DYE+ L++NSEV A ++ + P+ FNF I
Sbjct: 227 IVEVGKVYTVTKGTVKMANKQYSTNPFDYEIILDKNSEVRCAADDGS--PRYFFNFTKIS 284
Query: 299 ELGRYVNGTELVDIIGVVQNV-SPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
++ G+ D+IGVV+ P+ + R + NE++ KRD+ + DE+ +V ++LW
Sbjct: 285 DISL---GSAYCDVIGVVKEAYGPSTVMVRSTQNELL-KRDVVLVDESG-SVRLTLW--- 336
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
GQ+ + ++ ++ +KS+KV +F GIS+ST G S V+V+PD+ EA +L WY+S
Sbjct: 337 ----GQKAEIDIEEGVVIGLKSIKVSEFNGISISTTGGSQVVVNPDISEAHELAGWYQSI 392
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
GK + +L + + V + + +I+ + +K D
Sbjct: 393 GKNMQV--------TLPRKEEKRRLVQEVKENELA-----------YSTIQGTVMFLKED 433
Query: 478 QAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
A+WY +CK CNKKV G Y CE C E+C+ RY++ + D +G+ W+S+F+
Sbjct: 434 -ALWYASCKGEGCNKKVMIEEGGNYRCERCNMTYEDCNYRYMVTMHLGDFTGQIWVSLFD 492
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E A G SA E+ E+ + Q ++ + + L R+ Q YN+E R R +
Sbjct: 493 EAATGFFGISAKEMKEMSEE--SPAELQALIRRMCFRECLFRIKSKQDNYNDELRMRYSG 550
Query: 596 RAVAPVDFAAESKFLLEEISK 616
+V+ +D ESK LL+ I K
Sbjct: 551 LSVSALDILKESKRLLDVIEK 571
>gi|354546965|emb|CCE43698.1| hypothetical protein CPAR2_213410 [Candida parapsilosis]
Length = 644
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 259/477 (54%), Gaps = 46/477 (9%)
Query: 160 GNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE 219
G APA R+ P+ +++PYQ WTIK RV+ KG +R++ NA+GEG VF++ DE
Sbjct: 187 GQPAPA-------RISPIETISPYQNTWTIKARVSYKGELRSWSNAKGEGKVFSINFLDE 239
Query: 220 DGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
+I+A+ FNE+A + Y+ + GKVYYIS+ + A K+F + + YE+ L +++E+ E
Sbjct: 240 -SDEIKASAFNESAERAYNLLEEGKVYYISKAKVGAARKKFNNLTHPYELTLEKDTEITE 298
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
+E+ +P+ FNFV +D++ + + +VD++G ++ V+P I KS + +RDI
Sbjct: 299 CFDESD-VPKLNFNFVKLDKI-QNLEPNAIVDVLGALKVVNPPFQITAKSTGKAFDRRDI 356
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL 399
T+ DET V V LWN A + E + ++A K KV DF G SLS +++
Sbjct: 357 TIVDETGFAVDVGLWNNTAVDFSVE------EGTVIAFKGCKVSDFNGRSLSLTQAGSIV 410
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM--YSDRVSLTHI----TS 453
+P PE+ +LK W+++ G + S+ + N + S+ ++R ++ + +
Sbjct: 411 PNPGTPESYQLKGWFDNVGVKENFKSMKT-----ETNASSSLDRLANRKTIAQVEEETNN 465
Query: 454 NPSLGDEKPV--FFSIKAYISLIKPDQAMWYRACKT--------------CNKKVTDALG 497
N GD++ +F++KA S KP+ Y AC CNKK+ + +
Sbjct: 466 NIDGGDQQQQSGYFTVKACFSFTKPEN-FAYPACTNIVSNNTDSSKPGLPCNKKLVE-VN 523
Query: 498 SGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLG 557
+ CE C + +E + RYI+ + D +G+ W ++F+E+A++++G A+EL +L S
Sbjct: 524 DKWRCERCDLSYDEPTYRYILYISITDATGQLWTTLFDEQAKKLLGIDANELMKL-SLPN 582
Query: 558 DDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ ++ + + + R+ V Q +N++ + R ++ +D+ E +FL E+
Sbjct: 583 ESHAVAEYISRAYFKEYNFRLRVKQDTFNDQLKLRYQCVGLSDIDYNTECEFLCSEL 639
>gi|315057045|ref|XP_003177897.1| replication factor-A protein 1 [Arthroderma gypseum CBS 118893]
gi|311339743|gb|EFQ98945.1| replication factor-A protein 1 [Arthroderma gypseum CBS 118893]
Length = 598
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/632 (29%), Positives = 312/632 (49%), Gaps = 55/632 (8%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT----GNRYMFNASDGKKRLKAI 56
M +S A+S + N + P+ ++Q L +K +RY SD ++ +
Sbjct: 1 MANQISVGALSAMFDN----TKQHDPQPILQCLRIKPVVVREQDRYGVVFSDVNHFVRTM 56
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
LP+ L++ V G ++ +RL ++ ++ + K + LI+ +V+S E E + K
Sbjct: 57 LPTQLNNYVTDGILRRGSFVRLTNFQVSVV--KGKHLLIIMGLDVLSALGEAERIGDPKP 114
Query: 117 DESGIIFKPKQEDEVKKDGPGIVLK-------PKQEMVAKSAAQILRDQNGNMAPAARLA 169
+PK DE+ G L P+ + + R + AP A
Sbjct: 115 ------LEPKSGDEMG--GQSTTLSSNEFYNAPQTHNPPQHFQNVQRPRPSGTAPNAN-- 164
Query: 170 MTRRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
+ + +L+P+ N WTIK R T K N++T+KN GEG +F+V L D+ G +I+AT
Sbjct: 165 ----IFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGEGKLFSVNLLDDSG-EIRATA 219
Query: 229 FNEAARKFYDRFQLGKVYYISR-GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
F + Y F+ G VYYIS T+++A K+F V NDYE+ + ++ VE+A ++ +
Sbjct: 220 FKDQCDLLYPVFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFDRDTVVEKAEDQND-V 278
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
PQ +FNF + L GT +D++GV+++V T + K++ + KR++T+ D +
Sbjct: 279 PQIRFNFTSLGNLQSIDKGT-TIDVLGVLKDVDTTSQVTSKTSGKPYDKRELTLVDNSGF 337
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
+V +++W AT D +S +VA K +KV DF G +LS L T+ V PD+ EA
Sbjct: 338 SVRLTVWGNTATT-----FDTPPES-VVAFKGVKVSDFGGRTLSLLSSGTITVDPDIEEA 391
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS-DRVSLTHITSNPSLGDEKPVFFS 466
+LK WY+++GK S + SG+ + + + I S S + F+
Sbjct: 392 HRLKGWYDAQGKANSFTAYSSGVTGGGGGSWPTFKTISEIRDEEIPSADSFEN-----FA 446
Query: 467 IKAYISLIKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
+KA + +K + + Y AC + C NKKVT + CE C+++ RYI+
Sbjct: 447 LKATVIHVKDN--LCYPACPNEACKNKKVTRGDSDQWHCERCERSYANPKYRYILSLNAS 504
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G+ W+S F+E + I G +ADEL +K + DD + K T+ +
Sbjct: 505 DHTGQIWLSCFDEAGQMIFGMTADELMRIKEE--DDAAANEITKGATYCTWNFKCRAKLD 562
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
Y ++R R V A P+D++ E+ L + I+
Sbjct: 563 TYQEQQRTRYNVYAATPIDYSTEADQLSKLIA 594
>gi|452004612|gb|EMD97068.1| hypothetical protein COCHEDRAFT_1189989 [Cochliobolus
heterostrophus C5]
Length = 611
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 172/586 (29%), Positives = 297/586 (50%), Gaps = 42/586 (7%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
R+ SD + ++ ++ + + V SG ++ ++RLL Y N K + LI+ + E
Sbjct: 47 RFRVVLSDIRNFIQTMIATTANEIVTSGQLKKGSIVRLLKY--NPQRVKDKNILIIMELE 104
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG-----PGIVLKPKQEMVAKSAAQIL 155
V+S E++ I +P+ D D PG + A + L
Sbjct: 105 VLSQYGELDK-----------IGQPEALDTKPADAQPAAIPGNNFYGSKPAPAPQPQRSL 153
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
N ++ ++P+ SL+PY WTI+ R T K +M+ + N +G G +F+V
Sbjct: 154 PTHQSNPGTSSH----PHLYPIESLSPYAHKWTIRARCTHKSDMKEWHNQKGTGKLFSVN 209
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNEN 274
L D+ G +I+AT F E A K + F+ G VYYIS + +A K F + NDYE+ +
Sbjct: 210 LLDDTG-EIRATAFTEVADKLFPVFEEGVVYYISAPCRVTLAKKNFSNLPNDYELQFERD 268
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
+EVE+A ++ PQ +FNF I +L V +D IGV++ V+ +I K+ N+
Sbjct: 269 TEVEKAEDQDN-KPQIRFNFTKIGDLTS-VEKDTTIDTIGVLKEVAEVTTITSKNTNKDF 326
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR++T+AD+++ +V +++W + A + L IVA K +KV DF G SLS L
Sbjct: 327 SKRELTLADDSQTSVRLTIWGKTAESFDVPL------ESIVAFKGVKVSDFGGRSLSLLS 380
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
+++V PD+ EA KL+ W+ + G+ + ++ S + + G+++ D ++ I
Sbjct: 381 SGSMMVDPDIDEAHKLRGWFNAVGQNATFSTHQSMVSNTG--GSKN---DAKPISAIIEE 435
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEEC 512
+ + P + S++A + ++ D Y AC T CNKKV + +WCE CQ E
Sbjct: 436 EAYLQDTPSYMSLRASVVYVR-DSTFAYPACSTQGCNKKVIEENPGSWWCEKCQAAFPEP 494
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK--LKEVT 570
+ RY++ A V D +G W+S F+E + IIG SA+E ++K ++ + + ++E T
Sbjct: 495 NYRYVLSANVGDHTGTLWLSCFDEAGQAIIGVSANEAMKMKMDDEENGTTNFRNVMQEAT 554
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
RV + Y ++ + R V + P++FA E+ L + I +
Sbjct: 555 CKTFNFRVRAKMETYQDQPKPRYQVMNIYPLNFAQEANKLAQLIKQ 600
>gi|190688746|gb|ACE86409.1| replication protein A1-like protein [Sorghum bicolor]
Length = 993
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 254/453 (56%), Gaps = 24/453 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNPYQ W I RVT+K ++R Y N+RG G VF+ +L D G +I+AT FN A +
Sbjct: 484 PVAQLNPYQTRWKIMARVTAKTDLRHYSNSRGPGKVFSFDLLDGQGGEIRATCFNVQADQ 543
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F+D ++ KVY IS+G L+ A K+F ++ ++YE+ L+ + +E V++ + IP+ ++NF
Sbjct: 544 FFDLIEVDKVYLISKGLLKPAMKKFNSLNHEYEVTLDHRTSIEVCVDDDSNIPRQQYNFR 603
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I E+ + +VD+IG+V +V P+ + RK + KR + + D + R++ + LW
Sbjct: 604 QISEI-ENIEAGAIVDLIGIVTSVGPSSIVMRKDGTQ-TQKRTLQLKDMSFRSLEIILWG 661
Query: 356 ELATNVGQ--ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
+ G+ +LL ++ +PI+++K +V DF G S+ T+ + + V+PD A++LK W
Sbjct: 662 KFCDAEGRQLQLLCDSGSNPILSLKGGRVCDFSGRSVVTISSTQLKVNPDFQVAERLKQW 721
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYIS 472
Y EGK T+ S+ G+ ++++ S + + +LG +KP F ++K IS
Sbjct: 722 YIIEGKNTAFISLSWGISNMSR-------SHVLKTIAQIKDENLGRSDKPDFITVKGAIS 774
Query: 473 LIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDG 525
+K D Y AC + CNKKV + G G W C+ C K+ RY+++ ++ D
Sbjct: 775 HLKTDN-FCYPACTMEVNGRLCNKKVMNN-GDGTWQCDKCNKSLPNFEYRYLLLCQIQDH 832
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G + + F E I G +A EL +++ DD + ++ V +L ++ + ++ Y
Sbjct: 833 TGVTYATAFQAAGEAIFGHTAQELFMIQNVEQDDMRFTEIMQAVLRREYLFKLKIYEETY 892
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
N E+R + ++ V+ E+ LL+++S+ +
Sbjct: 893 NGEQR---VICSIIGVEKLEETNNLLKDVSRPI 922
>gi|328770102|gb|EGF80144.1| hypothetical protein BATDEDRAFT_88559 [Batrachochytrium
dendrobatidis JAM81]
Length = 643
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 187/635 (29%), Positives = 317/635 (49%), Gaps = 67/635 (10%)
Query: 26 PEIVVQVLDLKLTGN--------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIR 77
PE +VQVL++K N RY SDG +++++ S L+ V SG+I G+I+
Sbjct: 27 PEAIVQVLNIKKVPNGQGQPGMERYRLMISDGVNYIQSMIASQLNELVSSGSITKFGIIK 86
Query: 78 LLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKI-EVKSDESGIIFKPKQEDEVKKDGP 136
L Y N + +K + LI+ E ++P + ++ S + + P G
Sbjct: 87 LQKYICNTVSSK--RILIILALENLTPFNDTIQRVGNPVSLDGNTVTDPNAATHAPAVGS 144
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGN-MA-------PAARLAMT-------------RRVH 175
+Q A + R Q MA A R A++ V+
Sbjct: 145 ASTFG-QQHAPALPTSSFSRQQGQQPMALPSNYNQQAGRSALSGSGSSNMPYGGGASTVN 203
Query: 176 PLVSLNPY---------QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
+ PY Q WTIK + +KG++RT+ A EG +FN ++D+ G I+
Sbjct: 204 NGDTAGPYFAIKTLNPYQNKWTIKGVIINKGSVRTWNKAGREGRLFNFTISDDSG-DIRC 262
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF 286
T FNEA FY+ Q G+ Y IS+ ++V+N F +DYEM ++ ++ + N+
Sbjct: 263 TGFNEAVDMFYESIQEGQAYVISKAMIKVSNPAFNKGGHDYEMTIDPHTSI-TVCNDPKS 321
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
IPQ K+N + +D L V ++DI+ VV+ P I K+NN++ KRD+ + DE+
Sbjct: 322 IPQIKYNALTLDRLLE-VEKDAVIDILAVVKECFPVSEITTKANNKL-KKRDLNIVDESG 379
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V ++LW A E +++D +P++ IK+ +VGDF G +LS ST+ ++P + +
Sbjct: 380 WLVRLTLWGSQA-----ETFEHSD-NPVIGIKNARVGDFGGRTLSVAMSSTLTLNPTMQD 433
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI--TSNPSLGD-EKPV 463
A +L+ W++++ +SI S + +G S S +L I + +LG+ EKP
Sbjct: 434 AFRLRGWFDAKA-----SSIDFHTYSKSSSGVTSGNSTHSNLKTIQQIQDANLGNGEKPD 488
Query: 464 FFSIKAYISLIKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
+ S++A+IS K + +WY AC + C NKKV + +GS + CE C N RYI
Sbjct: 489 YVSLRAFISFAKREN-LWYPACPNEACRNKKVVE-IGSEWRCEKCDSNYPHPVYRYITSF 546
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
V D +G+ W+ FNE E+++G +A+E+ +L D + + +++ + ++ V
Sbjct: 547 SVSDYTGQTWLQAFNETVEKVLGKTANEMQKLVDT--DKDEFDRIIEQAIYQEYVFDVRA 604
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ Y + K+ R+T+ VD+AA S+ +L IS
Sbjct: 605 KAEMYQDAKKTRLTIVEAKEVDYAAASREMLATIS 639
>gi|269860800|ref|XP_002650118.1| replication factor-A protein 1 [Enterocytozoon bieneusi H348]
gi|220066438|gb|EED43919.1| replication factor-A protein 1 [Enterocytozoon bieneusi H348]
Length = 567
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 289/577 (50%), Gaps = 55/577 (9%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY SDGK ++ I S++S +V G I+N +I++ + + T YL++
Sbjct: 42 RYKLVLSDGKYFMRGIFSSDVSMQVEMGIIKNYTIIQIGSMTVKQKDTTI--YLLI---- 95
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNG 160
S ++ E E+K I D ++ + K + + K + D+
Sbjct: 96 --SSIIQYEHYNELKGTPISI-----SSDALQLSKNVLTTKISENHINKLKRPVEDDK-- 146
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
+ P+ +NP+ NW I+ R+ K N++ + N GEG VF+ E+ DE
Sbjct: 147 -IISKKEKTNNEPFTPIKDINPFLINWKIQGRILQKTNLKKFNNKNGEGKVFSFEIMDE- 204
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
QI+ F +AA FY + ++Y ++ G +++ANK+F T DYE++L+ NS +E
Sbjct: 205 TEQIKVICFGDAAEMFYPLIENNQIYSLTHGQIKMANKRFNTNNCDYEIHLDTNSIIE-L 263
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
N+ + IP F F I+EL T LVDI+G+++ + P +I KS+N + KRDI
Sbjct: 264 CNDASNIPMISFKFKKINELSLI---TSLVDIVGIIKEIYPIQNIITKSDNREISKRDIL 320
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
V DET + V+LW G + L K ++ +K KV ++ GI+L ++ S V++
Sbjct: 321 VIDETGY-IKVTLW-------GDKALQEYQKDSVICLKGFKVIEYNGINLGSVSSSQVVL 372
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT-SNPSLGD 459
+ LPE KL WYE+EGK S+ +Y+ R S+ +IT SN G
Sbjct: 373 NSMLPEVIKLVKWYETEGKEISVEK-------------TKIYTKRYSIANITESNIEYG- 418
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
I I+ IK D ++Y AC T C+KKV Y CE C + C+ RY+
Sbjct: 419 ------IIHGTITYIKEDN-LYYMACPTDGCSKKVIQEDLEHYRCEKCNNVFKTCNYRYM 471
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
V + D +G+ WI++FN+ A++I SA++L++LK ++ DN+ ++ +K + ++
Sbjct: 472 TVLGISDFTGQLWINVFNDVAKQIFNISAEDLHKLK-EIDSDNATKL-VKNIIGKEFAIK 529
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
V V +Q YN E +R+ + ++ E K + E I
Sbjct: 530 VRVVKQIYNEETIKRINCLELDEINLDQEIKLMTELI 566
>gi|297736413|emb|CBI25136.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 132/158 (83%), Gaps = 1/158 (0%)
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
L T+ +ELLDNADK PI+AIKSLKVGDFQG+SLSTL +S LV+PD PE+KKL+SWY
Sbjct: 11 LRTSRRRELLDNADKFPIIAIKSLKVGDFQGVSLSTLSKSIALVNPDTPESKKLRSWYHD 70
Query: 417 -EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
GK SMA IGS + +K G RSMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IK
Sbjct: 71 YHGKVASMACIGSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIK 130
Query: 476 PDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECS 513
P+Q MWY+ACKTCNKKVTDA+ SGYWCEGC+KND+ECS
Sbjct: 131 PEQTMWYQACKTCNKKVTDAIESGYWCEGCEKNDDECS 168
>gi|325095428|gb|EGC48738.1| replication factor A 1 [Ajellomyces capsulatus H88]
Length = 602
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 304/616 (49%), Gaps = 41/616 (6%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS I E VVQ + +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSKPKIAEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLGTQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG + +RL + N I K ++ LI+ EV+ E KI D +
Sbjct: 68 HYVTSGQLVRGCFVRLKSFQANMI--KGKRILIIFDLEVLDRLGICEKKI---GDPQPLD 122
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
K +++D+ I S Q AA ++P+ +L+P
Sbjct: 123 TKQEEQDKT------IPTTISSNGFYGSRGPQQPPQQPAQRSAAAATAHANIYPIEALSP 176
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y F+
Sbjct: 177 YSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLDDSG-EIRATAFKDQCDSLYGVFEE 235
Query: 243 GKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
G VYYIS +++A K F + N+YE+ +++ VE+A E +PQ +FNF I L
Sbjct: 236 GCVYYISSPCRVQMAKKAFNNLNNEYELTFEKDTIVEKA-EEQNDVPQIRFNFTNIANLQ 294
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
GT +D+IGV+++V I K+ ++ KRD+T+ D T +V +++W +A
Sbjct: 295 SVEAGT-TIDVIGVLKDVGELSQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWGNIAKE- 352
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
D+ +S +VA K +KV DF G SLS L ++ V PD+ +A KLK WY+++G+
Sbjct: 353 ----FDSVPES-VVAFKGVKVSDFNGRSLSLLSSGSMTVDPDIEDAHKLKGWYDAQGRSE 407
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAM 480
+ AS S + + A G R+ + H +LG EKP +FS+KA + +K D M
Sbjct: 408 TFASHDS-MNNAAGFGDRASSFKTIVQVH---EGNLGMSEKPDYFSVKATVVYVKQD-TM 462
Query: 481 WYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
Y AC T CNKKV + CE C ++ RYI+ VCD +G W+S F+E
Sbjct: 463 AYPACLTDKCNKKVLQDENGQWRCERCDQSFPHPEYRYILSVNVCDHTGALWLSCFDEVG 522
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
+ I+G SA+EL ELK D+ +Y+ ++ + +++R R V +V
Sbjct: 523 KIILGTSANELMELKE--NDERAYEELVQRANCRAWNFNCRAKMDNFQDQQRVRYQVSSV 580
Query: 599 APVDFAAESKFLLEEI 614
+ +D++ ES L E I
Sbjct: 581 SAIDYSVESARLAELI 596
>gi|157133641|ref|XP_001662954.1| replication factor a 1, rfa1 [Aedes aegypti]
gi|108870757|gb|EAT34982.1| AAEL012826-PA [Aedes aegypti]
Length = 619
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 241/444 (54%), Gaps = 21/444 (4%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
HP+ SL+PYQ W I+ RV SK +RT+ NA+GEG +F++++ DE G +I+ T F +
Sbjct: 184 HPINSLSPYQNKWVIRARVMSKSGIRTWSNAKGEGKLFSMDVMDESG-EIRVTAFKDQCD 242
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
K+YD ++ KVYYI++ L+ ANKQ+ T++NDYEM + ++ V+E + + +P ++NF
Sbjct: 243 KYYDMIEVDKVYYITKCQLKPANKQYSTLKNDYEMTMTNDTIVQECKDAGSSMPSIQYNF 302
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
VPI ++G + ++D+IGV + M +S+ + KR++T+ D + V+++LW
Sbjct: 303 VPISQIGN-MEPNAMIDVIGVCKEAGEVMQFTARSSGRELKKREVTLVDSSNAAVSLTLW 361
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLKSW 413
+ A N NA +P++ IK +V +F G SL + S + +PD EA K++ W
Sbjct: 362 GDDAQNF------NATNNPVLVIKGARVTEFGGGKSLGLVASSVLKTNPDNEEAHKIRGW 415
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYIS 472
Y G + S+ + + GA + YS H +LG +KP +F +KA I
Sbjct: 416 YLGGGCDNVVNSVST------RTGAGAGYSTEWITFHEAKEKNLGAGDKPDYFQVKALIH 469
Query: 473 LIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
IK A+ Y+AC CNKKV D Y CE C + R ++ V D + W
Sbjct: 470 NIKSANAV-YKACPQAECNKKVIDQDNGQYRCEKCNADFPNFKYRLLVNMLVGDWTSNRW 528
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+++F + AE+++G S+ ++ + + D + Q+ + + ++ ++ + Y + R
Sbjct: 529 VTVFTDLAEQMLGKSSQDIGD-ALEFNKDEAEQI-FSAINFKSYVFKLRTKVEFYGDSSR 586
Query: 591 QRVTVRAVAPVDFAAESKFLLEEI 614
+ T A PV+ + +L++ I
Sbjct: 587 NKTTAVAANPVNHKEYNAYLIKNI 610
>gi|115398417|ref|XP_001214800.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192991|gb|EAU34691.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 588
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 188/605 (31%), Positives = 295/605 (48%), Gaps = 46/605 (7%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I P + E +VQ + +K RY SD ++ +L + +
Sbjct: 13 ALSAIFDETKPQ----VREPIVQCVQIKPLPPQQNNQERYRAVFSDISNYVQTMLATQAN 68
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG ++ ++L + N + K +K LI+ EV+ E E E K ES
Sbjct: 69 PFVTSGLLRRGCFVKLKSFQANSV--KGKKILIILDLEVLQELGEAEKIGEPKPLES--- 123
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR--VHPLVSL 180
K EDE K I S Q + Q N APA ++P+ ++
Sbjct: 124 ---KAEDEEKPQPTTI----SSNGFYGSKTQGAQAQTTNRAPARPPVAPGHATMYPIEAI 176
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
+PY WTIK R TSK N++T++N + G +F+V L D+ G +I+AT FNE YD F
Sbjct: 177 SPYCHKWTIKARCTSKTNIKTWQNTKSTGKLFSVNLLDDSG-EIRATGFNEQCDALYDLF 235
Query: 241 QLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
Q G VYYIS +++A KQF + NDYE+ ++ VE+A +++ +PQ +FNF I +
Sbjct: 236 QEGGVYYISTPCRVQIAKKQFTNLNNDYELTFERDTVVEKAEDQSD-VPQVRFNFTTIGD 294
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
L + V +D+IGV++ I K+ ++ KR++T+ D T +V +++W A
Sbjct: 295 L-QSVEKDTTIDVIGVLKEAGECSQIVSKTTSKPYNKRELTLVDNTGFSVRLTIWGATAM 353
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
+ N +VA K +KV DF G SLS L ++ V PD+ EA +LK WY+++G+
Sbjct: 354 DF------NVSPEAVVAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGR 407
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQ 478
+ S SL+ +M +D LG E +FS+KA + IK +
Sbjct: 408 DENFTS----HASLSSATTSTMKADSFKTIGQVKEEQLGMSEDAAYFSLKATVIYIK-QE 462
Query: 479 AMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
++Y AC + CNKKVT+ L G W CE C+K RYIM+ V D +G+ W+S F+
Sbjct: 463 NVYYPACLSEGCNKKVTE-LDPGQWHCERCEKTYPHPEYRYIMLINVSDHTGQLWLSCFD 521
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E ++G SA+EL+ L+ D+ + + R ++ ++R R V
Sbjct: 522 EVGRLMMGTSANELSALRE--NDEKAAGEIFQNANCRTWNFRCRAKTDHFDGQQRIRYQV 579
Query: 596 RAVAP 600
+ P
Sbjct: 580 SSAKP 584
>gi|242086613|ref|XP_002439139.1| hypothetical protein SORBIDRAFT_09g001250 [Sorghum bicolor]
gi|241944424|gb|EES17569.1| hypothetical protein SORBIDRAFT_09g001250 [Sorghum bicolor]
Length = 663
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 254/453 (56%), Gaps = 24/453 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNPYQ W I RVT+K ++R Y N+RG G VF+ +L D G +I+AT FN A +
Sbjct: 154 PVAQLNPYQTRWKIMARVTAKTDLRHYSNSRGPGKVFSFDLLDGQGGEIRATCFNVQADQ 213
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F+D ++ KVY IS+G L+ A K+F ++ ++YE+ L+ + +E V++ + IP+ ++NF
Sbjct: 214 FFDLIEVDKVYLISKGLLKPAMKKFNSLNHEYEVTLDHRTSIEVCVDDDSNIPRQQYNFR 273
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I E+ + +VD+IG+V +V P+ + RK + KR + + D + R++ + LW
Sbjct: 274 QISEI-ENIEAGAIVDLIGIVTSVGPSSIVMRKDGTQ-TQKRTLQLKDMSFRSLEIILWG 331
Query: 356 ELATNVGQ--ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
+ G+ +LL ++ +PI+++K +V DF G S+ T+ + + V+PD A++LK W
Sbjct: 332 KFCDAEGRQLQLLCDSGSNPILSLKGGRVCDFSGRSVVTISSTQLKVNPDFQVAERLKQW 391
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYIS 472
Y EGK T+ S+ G+ ++++ S + + +LG +KP F ++K IS
Sbjct: 392 YIIEGKNTAFISLSWGISNMSR-------SHVLKTIAQIKDENLGRSDKPDFITVKGAIS 444
Query: 473 LIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDG 525
+K D Y AC + CNKKV + G G W C+ C K+ RY+++ ++ D
Sbjct: 445 HLKTDN-FCYPACTMEVNGRLCNKKVMNN-GDGTWQCDKCNKSLPNFEYRYLLLCQIQDH 502
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G + + F E I G +A EL +++ DD + ++ V +L ++ + ++ Y
Sbjct: 503 TGVTYATAFQAAGEAIFGHTAQELFMIQNVEQDDMRFTEIMQAVLRREYLFKLKIYEETY 562
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
N E+R + ++ V+ E+ LL+++S+ +
Sbjct: 563 NGEQR---VICSIIGVEKLEETNNLLKDVSRPI 592
>gi|347441232|emb|CCD34153.1| similar to replication protein A 70 kDa DNA-binding subunit
[Botryotinia fuckeliana]
Length = 609
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 292/588 (49%), Gaps = 48/588 (8%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLI----- 95
R+ SD + ++ +L + + + G + IRL +Y NE+ K ++
Sbjct: 50 RFRLVVSDIQNFVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDVI 109
Query: 96 --VTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ 153
+ E + ++++ +VK + I G G Q + +
Sbjct: 110 ESLGTMEKIGEPTAVKVEEDVKPTNTSIA------------GSGFYGNKPQPQQPAAQDR 157
Query: 154 ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
L +NG + ++ ++P+ SL+PY WTIK RVTSK ++RT+ EG +F+
Sbjct: 158 ALPSRNGPSSSSSHAT----IYPIESLSPYAHKWTIKARVTSKSDIRTWSKPNSEGKLFS 213
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI-SRGTLRVANKQFKTVQNDYEMNLN 272
V L DE G +I+AT FNE Y+ FQ G VYYI S +++A KQF + NDYE+
Sbjct: 214 VNLLDESG-EIKATGFNEQCDALYETFQEGSVYYITSPCRVQIAKKQFSNINNDYELMFE 272
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++ VE+A ++ +PQ ++NF I +L + + VD+I V++ V I K+ ++
Sbjct: 273 RDTLVEKAEDQDN-VPQVRYNFSNIGDL-QSIEKDSTVDLIAVLKEVGEISEITSKTTSK 330
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISL 390
KR++T+ DET +V +++W + AT+ D SP +VA K +KV DF G SL
Sbjct: 331 PYSKRELTLVDETGYSVRLTIWGKTATSF--------DASPESVVAFKGVKVSDFGGRSL 382
Query: 391 STLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH 450
S L ++ PD+ EA KLK WY+S+G+ ++ AS S L S G R D +
Sbjct: 383 SLLSSGSMSFDPDIQEAHKLKGWYDSQGRTSNFAS-HSNLASAGAAGGRQ---DPIKTIA 438
Query: 451 ITSNPSLG--DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQ 506
+ LG +E +FS +A I IK D Y AC + CNKKV D + CE C
Sbjct: 439 QVKDEGLGMSEENTDYFSSRATIVYIKQDN-FCYPACLNENCNKKVVDQNDGTWRCEKCN 497
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL 566
++ + RYI+ V D +G+ W++ F+E I+G SADEL ELK D + +
Sbjct: 498 QSHPKPEYRYILALNVNDHTGQMWLTAFDEVGRLIMGKSADELMELKE--NDPPAMERVF 555
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ +V Y ++ R R +V + V++AA++ L E I
Sbjct: 556 EDANCKMMTFKVRCKTDTYQDQARVRYSVMSALAVNYAADALKLAELI 603
>gi|451853197|gb|EMD66491.1| hypothetical protein COCSADRAFT_138126 [Cochliobolus sativus
ND90Pr]
Length = 611
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 299/594 (50%), Gaps = 48/594 (8%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
R+ SD + ++ ++ + + V SG ++ ++RLL Y N K + LI+ + E
Sbjct: 47 RFRVVLSDIRNFIQTMIATTANEIVTSGQLKKGSIVRLLKY--NPQRVKDKNILIIMELE 104
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDG-----PGIVLKPKQEMVAKSAAQIL 155
V+S E++ I +P+ D D PG + A + L
Sbjct: 105 VLSQYGELDK-----------IGQPEALDTKPADAQPAAIPGNNFYGSKPAPAPQPQRSL 153
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
N ++ ++P+ SL+PY WTI+ R T K +M+ + N +G G +F+V
Sbjct: 154 PTHQSNPGTSSH----PHLYPIESLSPYAHKWTIRARCTHKSDMKEWHNQKGTGKLFSVN 209
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNEN 274
L D+ G +I+AT F E A K + F+ G VYYIS + +A K F + NDYE+ +
Sbjct: 210 LLDDTG-EIRATAFTEVADKLFPVFEEGVVYYISAPCRVTLAKKNFSNLPNDYELQFERD 268
Query: 275 SEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
+EVE+A ++ PQ +FNF I +L V +D IGV++ V+ +I K+ N+
Sbjct: 269 TEVEKAEDQDN-KPQIRFNFTKIGDLTS-VEKDTTIDTIGVLKEVAEVTTITSKNTNKDF 326
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR++T+AD+++ +V +++W + A + L IVA K +KV DF G SLS L
Sbjct: 327 SKRELTLADDSQTSVRLTIWGKTAESFDVPL------ESIVAFKGVKVSDFGGRSLSLLS 380
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL--AKNGARSMYSDRVSLTHIT 452
+++V PD+ EA KL+ W+ + G+ + ++ + + + +KN A+ ++ I
Sbjct: 381 SGSMMVDPDIDEAHKLRGWFNAVGQSATFSTHQNMVSTTGGSKNDAKP-------ISAII 433
Query: 453 SNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDE 510
+ + P + S++A + +K D Y AC T CNKKV + +WCE CQ
Sbjct: 434 EEEAYLQDTPSYMSLRASVLYVK-DSTFAYPACSTQGCNKKVIEENPGSWWCEKCQATFP 492
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNS--YQMKLKE 568
E + RY++ A V D +G W+S F+E + I+G SA+E ++K ++ + + ++E
Sbjct: 493 EPNYRYVLSANVGDHTGTLWLSCFDEAGQTIVGMSANEAMKMKMDDEENGTRNFVNVMQE 552
Query: 569 VTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQN 622
T RV + Y ++ + R V + P++FA E+ L + I K H N
Sbjct: 553 ATCKTFNFRVRAKMETYQDQPKPRYQVMNIYPLNFAQEANKLAQLI--KQYHMN 604
>gi|407928380|gb|EKG21239.1| Nucleic acid binding OB-fold tRNA/helicase-type [Macrophomina
phaseolina MS6]
Length = 616
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/598 (28%), Positives = 303/598 (50%), Gaps = 35/598 (5%)
Query: 28 IVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIP 87
+ ++ +D K RY SD ++++L ++ + G ++ +IR+ Y N
Sbjct: 33 VQIKHMDSKAGEERYRIVLSDVDNFIQSMLSQQKNNLITEGLLKKGSMIRMKSY--NPQV 90
Query: 88 TKSEKYLIVTKCEVVSPALEMEI---KIEVKSDESGIIFKPKQEDEVKK--DGPGIVLKP 142
K K +V +V+S E+E + ++++ +G +PK E + ++ D G
Sbjct: 91 IKERKIFVVLDLDVLSEYGELEKIGNPVGLEANNAGPKVEPKAEPKTEQPADIGGGGFYG 150
Query: 143 KQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY 202
+ V + L +N AP LA ++ P+ +L+PY WTIK R K +++T+
Sbjct: 151 SKPPVKREQHSTLPSRN---APPPGLA---QLFPIEALSPYTHKWTIKARCVHKSDIKTW 204
Query: 203 KNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKT 262
N GEG +F+V L DE G +I+AT F E + YD F+ G VYYIS ++++A KQF
Sbjct: 205 HNKNGEGKLFSVNLLDESG-EIRATGFKEQCDQLYDTFREGGVYYISNCSVKLAKKQFSN 263
Query: 263 VQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT 322
V NDYE+ +S VE A ++ +PQ ++NF I +L + V +D IGV+++V
Sbjct: 264 VNNDYELTFQNDSIVEPA-DDPDSVPQVRYNFTHIGDL-QNVEPNTTIDTIGVLKDVGEV 321
Query: 323 MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKV 382
I K+ ++ KR++T+ D++ +V +++W A +A +VA K +KV
Sbjct: 322 SEIISKTTSKPYQKRELTIVDDSMTSVRLTIWGPTAQGF------DASPESVVAFKGVKV 375
Query: 383 GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMY 442
DF G SLS L ++ ++PD+ EA KLK WY+++G+ S ++ +
Sbjct: 376 SDFGGRSLSLLSSGSMNINPDIDEAHKLKGWYDAQGRNDQFTS-------HQQSSTGTSR 428
Query: 443 SDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSG 499
S + ++ +G ++P +F +KA I +K D Y AC + CNKKV + + G
Sbjct: 429 SRKYKTIAQVNDEQIGMSDQPEYFDLKATIVYVKHDN-FAYPACASAGCNKKVVE-INPG 486
Query: 500 YW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD 558
W CE C + RYIM V D +G+ W+S F++ + I+G SADEL E++ +
Sbjct: 487 EWRCEKCDITHTKPEYRYIMSCNVSDHTGQLWLSCFDDSGKIIMGKSADELVEIRDNEEN 546
Query: 559 DNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ ++ + T + V + +++R R V + ++ + E L+E + +
Sbjct: 547 PSKFEQSFVDATCKTFIFNVKAKMDTFQDQQRVRYQVSSAKELNLSFECARLIETLKQ 604
>gi|297271569|ref|XP_002800290.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Macaca mulatta]
Length = 532
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 254/487 (52%), Gaps = 37/487 (7%)
Query: 38 TGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKY 93
TGN RY SDG L + +L + L+ V + + + ++ + +N + +
Sbjct: 63 TGNSPPRYRLLMSDGLNTLSSFMLATQLNPLVEQERLSSNCICQIHRFIVNTL-KDGRRV 121
Query: 94 LIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ 153
+I+ + EV+ A + +KI + +P+ P KP+Q+ + A
Sbjct: 122 VILMELEVLKSAEAVGVKIGNPVPYNEGHGQPQAAPPASAGSPAASSKPQQQHGSSGAGS 181
Query: 154 ILRDQNG-----NMAPAARLAMTR-----RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYK 203
+ G A L+ T +V P+ SL PYQ WTI RVT+K +RT+
Sbjct: 182 TVSKAYGASKTFGKAGGPSLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWS 241
Query: 204 NARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTV 263
N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+GTL++ANKQF V
Sbjct: 242 NSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAV 300
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
+NDYEM N + V ++ +P +F+F ID+L + LVDIIG+ ++
Sbjct: 301 KNDYEMTFNNETSVMPCEDDR-HLPTVQFDFTGIDDL-ESKSKDSLVDIIGICKSYEDAT 358
Query: 324 SIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG 383
I +SNN V KR+I + D + + VT +LW E A + + P++AIK +V
Sbjct: 359 KITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKF------DGSRQPVLAIKGARVS 412
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNGARS 440
DF G SLS L ST++ +PD+PEA KL+ W+++EG+ G S++ + SG ++
Sbjct: 413 DFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKT 472
Query: 441 MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGS 498
+Y + + N GD KP +FS A + ++ + M Y+AC T CNKKV D
Sbjct: 473 LYEVK------SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNG 524
Query: 499 GYWCEGC 505
Y CE C
Sbjct: 525 LYRCEKC 531
>gi|242061678|ref|XP_002452128.1| hypothetical protein SORBIDRAFT_04g020190 [Sorghum bicolor]
gi|241931959|gb|EES05104.1| hypothetical protein SORBIDRAFT_04g020190 [Sorghum bicolor]
Length = 831
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 255/467 (54%), Gaps = 24/467 (5%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N AP A + V + SL YQ WTIK RVT+K ++ + NA+G G +F+ +L D +
Sbjct: 269 NRAPVASEPASHVV-AISSLKVYQTRWTIKARVTAKTGVKHWNNAKGTGKLFSFDLIDGE 327
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE-NSEVEE 279
G QI+A F EA KFYD ++ KVY IS G ++ + K+F + ND E+ L+ S VE
Sbjct: 328 GGQIRAVCFKEAVDKFYDLIEVDKVYLISSGAVKPSQKRFNPLNNDLEITLDTLTSSVEI 387
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++ IP+ +++F I E+ N + VD++GVV +V P++ + RK + KR +
Sbjct: 388 CSSDDFNIPKVQYSFQQISEIENMDNHSA-VDLLGVVTSVGPSVMMTRKDGTQ-TQKRTL 445
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRST 397
+ D + R+V V+ W + GQ+L S PI+A+ ++ DF G S+ST+G +
Sbjct: 446 QLRDMSGRSVGVTFWGDFCDVEGQQLQLQCHSSFNPILALIGARISDFSGRSVSTIGSTQ 505
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSD-RVSLTHITSNPS 456
+ ++PD P+A++L+ WY +EG T+ SL++ S+ +D R ++ I + +
Sbjct: 506 LKINPDFPDAERLRQWYVTEGMTTACL-------SLSREQFNSVQADVRKTIAQI-KDET 557
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKND 509
LG K + ++KA IS ++ ++ Y AC K CNKKV D+ G G W CE C K+
Sbjct: 558 LGRNKTDWITVKAAISHVQ-TESFCYPACPLIFNEKPCNKKVIDS-GDGIWFCERCDKSS 615
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
C RY++ R+ D + + F E ++I G +A EL +++ D+ + ++
Sbjct: 616 GSCEYRYMVKFRIQDHTSTIIATAFQEAGKQIFGRTAQELRTIRNVNHDEALFTEIIEGA 675
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
W +L ++ V ++ YN+E+R T+ +D + ES L E I +
Sbjct: 676 RWHLNLFKLKVREESYNDEQRIGCTIINAEKLDPSKESNVLFEAIDR 722
>gi|225678017|gb|EEH16301.1| replication protein A 70 kDa DNA-binding subunit [Paracoccidioides
brasiliensis Pb03]
gi|226287502|gb|EEH43015.1| replication factor-A protein [Paracoccidioides brasiliensis Pb18]
Length = 603
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 305/616 (49%), Gaps = 40/616 (6%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS + E VVQ + +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSKPKVAEPVVQCVQVKPLPPQPNSPERFRAVFSDISNYVQTMLATQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG + +RL + N + K ++ LIV EV+ E KI + +
Sbjct: 68 HYVTSGQLVRGCFVRLKSFQANLV--KGKRILIVLDLEVLDRLGVCEKKI---GEPQPLD 122
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
K +++D K P + S A Q +A ++P+ +L+P
Sbjct: 123 MKQEEQD---KSLPTTI---STNGFYGSRAPQQAPQQSAQRSSASTTAYANIYPIEALSP 176
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y F+
Sbjct: 177 YSHKWTIKARCTNKSEIKTWHNKNGEGRLFSVNLLDDSG-EIRATAFKDQCDALYGVFEE 235
Query: 243 GKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
G VYYIS +++A K F + N+YE+ +++ VE+A E +PQ +FNF I L
Sbjct: 236 GSVYYISSPCRVQIAKKAFTNLNNEYELTFEKDTVVEKA-EEQNDVPQIRFNFTNIANLQ 294
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
GT +D+IGV+++V I K+ ++ KRD+T+ D T +V +++W A +
Sbjct: 295 TIEPGT-TIDVIGVLKDVGEASQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWGNAAKD- 352
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
D+ +S +VA K +KV DF G SLS L ++ V PD+ +A KLK WYE++G+
Sbjct: 353 ----FDSMPES-VVAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEDAHKLKGWYEAQGRSE 407
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAM 480
+ AS S G++ GA ++ +LG EKP +FS+KA + +K D M
Sbjct: 408 TFASHESISGAV---GAGDRRANSFKTIAQVQEENLGMSEKPDYFSLKATVVYVKQD-TM 463
Query: 481 WYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
Y AC T CNKKV + CE C ++ RYI+ VCD +G W+S F+E
Sbjct: 464 AYPACLTDKCNKKVLQDETGRWRCERCDQSFPRPEYRYILSVNVCDHTGALWLSCFDEVG 523
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
+ ++G SA+E+ ELK D+ +++ +++ + ++R R V +V
Sbjct: 524 KALLGISANEIMELKD--NDERAHEELVQKANCRAWNFNCRAKMDSFQEQQRVRYQVSSV 581
Query: 599 APVDFAAESKFLLEEI 614
+P+D+ ES L E I
Sbjct: 582 SPIDYTTESVRLAELI 597
>gi|225557692|gb|EEH05977.1| replication factor [Ajellomyces capsulatus G186AR]
Length = 606
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 305/620 (49%), Gaps = 45/620 (7%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS I E VVQ + +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSKPKIAEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLATQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG + +RL + N + K ++ LI+ EV+ E KI D +
Sbjct: 68 HYVTSGQLVRGCFVRLKSFQANMV--KGKRILIILDLEVLDRLGICEKKI---GDPQPLD 122
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAAR----LAMTRRVHPLV 178
K +++D+ I S Q PA R ++P+
Sbjct: 123 AKQEEQDKT------IPTTISSNGFYGSRGPQQPPQQPPQQPAQRSAAAATAHANIYPIE 176
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+L+PY WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y
Sbjct: 177 ALSPYSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLDDSG-EIRATAFKDQCDSLYG 235
Query: 239 RFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
F+ G VYYIS +++A K F + N+YE+ +++ VE+A E +PQ +FNF I
Sbjct: 236 VFEEGCVYYISSPCRVQMAKKAFNNLNNEYELTFEKDTIVEKA-EEQNDVPQIRFNFTNI 294
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
L GT +D+IGV+++V I K+ ++ KRD+T+ D T +V +++W +
Sbjct: 295 ANLQSVEAGT-TIDVIGVLKDVGELSQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWGNI 353
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
A D+ +S +VA K +KV DF G SLS L ++ V PD+ +A KLK WY+++
Sbjct: 354 AKE-----FDSVPES-VVAFKGVKVSDFNGRSLSLLSSGSMTVDPDIEDAHKLKGWYDAQ 407
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKP 476
G+ + AS S + + A G R+ + H +LG EKP +FS+KA + +K
Sbjct: 408 GRSETFASHDS-MNNAAGFGDRASSFKTIVQVH---EGNLGMSEKPDYFSVKATVVYVKQ 463
Query: 477 DQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
D M Y AC T CNKKV + CE C ++ RYI+ VCD +G W+S F
Sbjct: 464 D-TMAYPACLTDKCNKKVLQDENGQWRCERCDQSFPHPEYRYILSVNVCDHTGALWLSCF 522
Query: 535 NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
+E + I+G SA+EL ELK D+ +Y+ ++ + +++R R
Sbjct: 523 DEVGKIILGTSANELMELKE--NDERAYEELVQRANCRAWNFNCRAKMDNFQDQQRVRYQ 580
Query: 595 VRAVAPVDFAAESKFLLEEI 614
V +V+ +D++ ES L E I
Sbjct: 581 VSSVSAIDYSVESARLAELI 600
>gi|169769542|ref|XP_001819241.1| replication factor A protein 1 [Aspergillus oryzae RIB40]
gi|83767099|dbj|BAE57239.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863708|gb|EIT73008.1| single-stranded DNA-binding replication protein A [Aspergillus
oryzae 3.042]
Length = 605
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 298/614 (48%), Gaps = 41/614 (6%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILP 58
VS A+S I P I E VVQ + +K RY SD ++ +L
Sbjct: 9 VSVGALSAIFDETKPQ----ILEPVVQCVQIKPLPPQQNNQERYRAVFSDISNYVQTMLA 64
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS-D 117
+ + V SG ++ +RL + N + K +K LI+ EV+ E E E K +
Sbjct: 65 TQANRFVTSGQLRKGCFVRLKSFQANSV--KGKKILIILDLEVLQDLGEAEKIGEPKPLE 122
Query: 118 ESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPL 177
+ Q + +G K + Q+ A + ++P+
Sbjct: 123 SKTEEEEKSQPTTISSNG---FYGSKIQ-----GGQLQAPNKSAQPQPAAASAHATIYPI 174
Query: 178 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+++PY WTIK R TSK N+RT+ N G+G +F+V L D+ G +I+AT FN+ Y
Sbjct: 175 EAISPYSHKWTIKARCTSKSNIRTWHNRNGDGKLFSVNLLDDSG-EIRATGFNDQCDMLY 233
Query: 238 DRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
D FQ G VYYIS +++A KQF + NDYE+ ++ VE+A ++ A +PQ +F+F
Sbjct: 234 DVFQEGSVYYISSPCGVKLAKKQFTNLNNDYELTFERDTVVEKAEDQ-ADVPQIRFSFTT 292
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I +L + V +D+IGV++ V+ I K+ N+ KR++T+ D T +V +++W
Sbjct: 293 IGDL-QSVEKDTTIDVIGVLKEVAEVSQIMSKTTNKPYNKRELTLVDSTGFSVRLTVWGS 351
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A N N ++A K +KV DF G SLS L ++ V PD+ EA KLK WY++
Sbjct: 352 TALNF------NVTPESVIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHKLKGWYDA 405
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP 476
+G+ AS S G A + ++ + ++ +FS+KA + IK
Sbjct: 406 QGRDGVFASHASMPGVAASTTKLEQFK---TVAQVKEEQLGMSDEVAYFSLKATVIYIKQ 462
Query: 477 DQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
D M Y AC + CNKKVT+ L G W CE C K RYIM+ V D +G+ ++S
Sbjct: 463 D-TMCYPACLSEGCNKKVTE-LDPGQWRCERCDKTHPRPEYRYIMLISVSDHTGQLYLSC 520
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
F+E ++G SAD+L E++ DD + ++ R + +++R R
Sbjct: 521 FDEVGRYMMGTSADQLMEIRQ--NDDKAAGDIFQDANCRTWNFRCRAKIDNFGDQQRIRC 578
Query: 594 TVRAVAPVDFAAES 607
+ PV+++ E+
Sbjct: 579 QIVTAKPVNYSEEA 592
>gi|170032512|ref|XP_001844125.1| replication protein A 70 kDa DNA-binding subunit [Culex
quinquefasciatus]
gi|167872595|gb|EDS35978.1| replication protein A 70 kDa DNA-binding subunit [Culex
quinquefasciatus]
Length = 615
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 173/607 (28%), Positives = 299/607 (49%), Gaps = 46/607 (7%)
Query: 29 VVQVLDLK-LTGN-----RYMFNASDGKKRLK-AILPSNLSSEVISGNIQNKGLIRLLDY 81
VVQ+L K + G+ RY SDG+ A+L + L+ SG + +IR+ D
Sbjct: 25 VVQILGSKRIAGSGEQAERYRLLISDGQYLYSFAMLATQLNEMHHSGQLAEFTVIRI-DR 83
Query: 82 ALNEIPTKSEK----YLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPG 137
+ + ++E+ LI+ VV P + +KI +P E G
Sbjct: 84 FITSVVNRNERGEKRVLIILDLTVVKPGSAVGVKIGNP--------QPLTEGGNPSGGAA 135
Query: 138 IVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR------VHPLVSLNPYQGNWTIKV 191
P + A + + QN + + T+ HP+ SL+PYQ W IK
Sbjct: 136 SSGAPTRTESAGAVSNGSSYQNRLNSSVSASNSTQSSLQESLTHPINSLSPYQNKWVIKA 195
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RV SK +RT+ NA+GEG +F++++ DE G +I+ T F E KFYD + KVYYI++
Sbjct: 196 RVMSKSAIRTWSNAKGEGKLFSMDIMDESG-EIRVTAFKEQCDKFYDMIEADKVYYITKC 254
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
L+ ANKQ+ T++NDYEM ++ + ++E + A +P ++NFVPI ++ + ++D
Sbjct: 255 QLKPANKQYSTLKNDYEMTMSNETIIQECKDVDASMPGIQYNFVPISQITN-MEPNAMID 313
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++GV + S + KS+ + KR++T+ D + V ++LW A N
Sbjct: 314 VVGVCKEASELNTFTAKSSGRELTKREVTMVDSSNAAVQLTLWGADAQNF------PTST 367
Query: 372 SPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+P+V +K +V +F G SL +G S + ++PD+ A K++ WY++ G + S+ +
Sbjct: 368 NPVVVVKGARVTEFGGGKSLGLVGGSVMKLNPDIDVAHKIRGWYDNGGCDAVINSVSTRT 427
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRAC--KT 487
G+ A YS H T +LG +KP +F +KA + IK A+ Y+AC
Sbjct: 428 GA-----AGGSYSTEWMTFHETKEKNLGHGDKPDYFQVKALVHNIKSGNAV-YKACPQTD 481
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y CE C + R ++ V D + W+++F E E+++G ++
Sbjct: 482 CNKKVVDQDNGQYRCEKCNADFPNFKYRLLVNMLVGDWTSNRWVTVFTELGEQMLGKTSQ 541
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
E+ + + D + Q+ +++ + ++ + Y + R + T A PV+ +
Sbjct: 542 EIGD-ALEYNKDEAEQI-FSNISFASFIFKLRTKVEFYGDAARNKTTAVAATPVNHKEYN 599
Query: 608 KFLLEEI 614
+L++ I
Sbjct: 600 AYLVKNI 606
>gi|396082253|gb|AFN83863.1| DNA replication factor A protein 1 [Encephalitozoon romaleae
SJ-2008]
Length = 573
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 242/441 (54%), Gaps = 42/441 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT-QIQATMFNEAARKFYD 238
LNP+ WTIK RV K ++R + N +GEG VFN E++D GT Q++ F++ F+
Sbjct: 170 LNPFYNKWTIKGRVVVKSDIRRFTNHKGEGKVFNFEISD--GTAQVKIICFSDCVDIFFP 227
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
++GKVY IS+GT++ ANKQ+ T DYE+ L++ SEV A ++ + P+ FNFV I
Sbjct: 228 IVEVGKVYIISKGTVKTANKQYSTNPFDYEIILDKGSEVRCAADDGS--PRYFFNFVKIS 285
Query: 299 ELGRYVNGTELVDIIGVVQNV-SPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
+L G+ D+IGVV+ V SP+ + R + NE++ KRD + DE+ +V ++LW
Sbjct: 286 DLSL---GSTYCDVIGVVKEVYSPSTVMIRSTQNELL-KRDAILVDESG-SVRLTLW--- 337
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
G + + + ++ +KS+KV +F GI++ST G S V+V+PD+PEA +L WY+S
Sbjct: 338 ----GPKAEIDIEGGMVLGLKSIKVSEFNGITISTTGGSQVVVNPDIPEAHELAGWYQSI 393
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
GK + SL + + R + + N + + +I+ + +K D
Sbjct: 394 GKDMQV--------SLPRKEEK-----RRLIQEVKEN------ELAYSTIQGTVMFLKED 434
Query: 478 QAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
A+WY +CK CNKKV Y CE C E+C+ RY++ + D +G+ W+S+F+
Sbjct: 435 -ALWYTSCKGEGCNKKVAMEESGNYRCERCNMTYEDCNYRYMVSMHLGDFTGQIWVSLFD 493
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E A G SA E+ E+ + Q ++ + + L R+ Q YN+E R R +
Sbjct: 494 EAASGFFGISAREMKEMSEE--SPTELQTLIRRMYFRECLFRIKSKQDSYNDELRMRYSG 551
Query: 596 RAVAPVDFAAESKFLLEEISK 616
V +D ESK LL+ I K
Sbjct: 552 LNVITLDILKESKRLLDVIEK 572
>gi|159480170|ref|XP_001698157.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
gi|158273655|gb|EDO99442.1| replication protein A, 70 kDa DNA-binding subunit [Chlamydomonas
reinhardtii]
Length = 647
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 166/632 (26%), Positives = 311/632 (49%), Gaps = 55/632 (8%)
Query: 28 IVVQVLDLK-LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEI 86
+V++V +L+ + G ++ SDG ++ +L S + V SG + N LI++ + N I
Sbjct: 25 VVLRVSELQEVGGKKHKCMLSDGNNSIRGVLASQFADLVASGELSNGCLIKITAFVTNTI 84
Query: 87 PTKSEKYLIVTKCEVVSPA-----LEMEIKIEVKSDESGIIFKPKQEDEV---------- 131
S+ ++ T VVSP +E++ + ++ KP+ +
Sbjct: 85 --GSDDVVLATDLSVVSPGTGIVKMEVDNALNARNSTPEAAGKPQAKSSTADPDAKENST 142
Query: 132 --------KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMT----RRVHPLVS 179
K GPG L P S A AP M + H +
Sbjct: 143 PGPDFKSSKTPGPG--LSPVSFF---SPAPTPTGAGIKTAPTPPSTMGVSDRKNHHKIAQ 197
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L+PY+ NW I+ +V K +R ++ + V V+L DE GT IQ T + A + ++
Sbjct: 198 LHPYETNWCIRAKVDRKAPLRALP-SKPDVKVMTVDLVDETGTAIQGTFWRGPAERMSEQ 256
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
GKVY + ++ A+K++ TV+N+Y+++ + ++V EA ++ + T PI++
Sbjct: 257 LVEGKVYVFHKFKVKPADKKYVTVKNEYQIDFTDTTDVSEAADQDSSAMTTAVEVTPIEQ 316
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
L R + VD++GVV + +++RK++N +P+R++T+ D++ ++V ++LW ++++
Sbjct: 317 LPRRIGQRAPVDVMGVVLALGSYGTVKRKADNSELPRREVTIGDQSGKSVAITLWGDMSS 376
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE-SEG 418
Q+ L+ + ++ + +V D+ G SLSTL +S ++P+ P A+++ WY+ SE
Sbjct: 377 TTAQQ-LEGMEGRAVLQVTGCRVTDYNGCSLSTLSKSVASINPETPAAQQMMLWYKTSEM 435
Query: 419 KGTSMASIGSGLGSLAKNG------------ARSMYSDRVSLTHITS-NPSLGDEKPVFF 465
++G+ L +A+ AR Y ++ +T+ +L ++K +F
Sbjct: 436 NPDRFTAVGADL-VMARGSQGGSQGGAGGVPARERYFSLKDVSGLTAETEALANDKAIFQ 494
Query: 466 SIKAYISLI-KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ A +++I D+ ++Y A +KV D G +W E K E+ RY++ R+ D
Sbjct: 495 NVTACVAMINNDDKNIFYLANPENGRKVVDQGGGRFWSEADSKVVEKPEHRYLLSVRLAD 554
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+GE + +F +EAE ++G ADEL LK G+ + LK W P + V +E
Sbjct: 555 HTGETNVQLFGKEAEAVMGMRADELAALKEAGGE--GFAGALKAAQWKPWQVVVMSKARE 612
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
YN + R + V +D+ +ES L+ I+K
Sbjct: 613 YNGNRSVRHSAYKVENIDWVSESSRLVTLIAK 644
>gi|147818369|emb|CAN60163.1| hypothetical protein VITISV_008661 [Vitis vinifera]
Length = 774
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 144/188 (76%), Gaps = 14/188 (7%)
Query: 434 AKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVT 493
+K G RSMY DRVSL+H+TSNPSLG++KP FFSI+AYIS IKP+Q MWY+ACKTCNKKVT
Sbjct: 601 SKGGVRSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPEQTMWYQACKTCNKKVT 660
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
DA+ SGYW YIMV +V D SGEA +++FNE+AERI GCSADEL++LK
Sbjct: 661 DAIESGYW--------------YIMVVKVSDDSGEACLALFNEQAERIFGCSADELDKLK 706
Query: 554 SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEE 613
SQ G++N +Q KLKE WVPHL R+SVAQ EY NEKRQ +T AV VDFAA S+ LLEE
Sbjct: 707 SQEGEENRFQQKLKEAIWVPHLFRISVAQHEYMNEKRQWITAXAVVAVDFAAXSRLLLEE 766
Query: 614 ISKKVSHQ 621
ISK + Q
Sbjct: 767 ISKMKTSQ 774
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 32/34 (94%)
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
+ GVVQ+VSPTM IRRK+NNE+VPKRDIT+AD+T
Sbjct: 565 VSGVVQSVSPTMRIRRKNNNEIVPKRDITIADKT 598
>gi|121715180|ref|XP_001275199.1| replication factor A 1, rfa1 [Aspergillus clavatus NRRL 1]
gi|119403356|gb|EAW13773.1| replication factor A 1, rfa1 [Aspergillus clavatus NRRL 1]
Length = 603
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 309/621 (49%), Gaps = 43/621 (6%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN---RYMFNASDGKKRLKAILPSNL 61
VS A+S I +P I + VQ+ L N RY SD ++ +L +
Sbjct: 9 VSVGALSAIFDERNPQVQEPIVQ-CVQIKPLPPQPNHPERYRAVFSDITNYVQTMLATQA 67
Query: 62 SSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK--SDES 119
+ V SG ++ +RL + N + K +K LI+ EV+ E E E K ++S
Sbjct: 68 NHFVTSGMLKKGCFVRLKSFQANSV--KGKKILIILDLEVLQELGEAEKIGEPKPLENKS 125
Query: 120 GIIFKPKQEDEVKKDG-PGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLV 178
+ KP Q + +G G ++P++ +S Q R +P A T ++P+
Sbjct: 126 DVEEKP-QPTTISSNGFYGSKIQPQR---VESGVQPTR------SPLASTHAT--IYPIE 173
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
++P+ WTIK R TSK ++T+ N EG +F+V L D+ G +I+AT FNE YD
Sbjct: 174 YISPFSNKWTIKARCTSKSTIKTWHNRNSEGRLFSVNLLDDSG-EIRATGFNEQCDMLYD 232
Query: 239 RFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
FQ G VYYIS +++A KQF + NDYE+ + VE+A +++ +PQ +FNF +
Sbjct: 233 VFQEGGVYYISTPCRVQIAKKQFTNLNNDYEITFERGTVVEKAEDQSD-VPQVRFNFTTV 291
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
+L + V +D++GV++ V I KS N+ KR++T+ D + +V +++W
Sbjct: 292 GDL-QSVEKDTTIDVVGVLKEVGEISQIVSKSTNKPYDKRELTLVDSSGFSVRLTVWGTT 350
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
A N +A ++A K +KV DF G SLS L ++ + PD+ EA +LK WY+++
Sbjct: 351 ALNF------SATPESVIAFKGVKVSDFGGRSLSLLSSGSMTIDPDIEEAHRLKGWYDAQ 404
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKP 476
G+ + +S S + + G DR LG ++ +FS +A + IK
Sbjct: 405 GRHETFSSHASMSSASSSAGKL----DRFKTVAQIREEQLGMSDEAAYFSCRATVIYIKQ 460
Query: 477 DQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
D + Y AC + CNKKVT+ L G W CE C K RYIM+ V D +G+ W+S
Sbjct: 461 D-TICYPACLSQGCNKKVTE-LDPGQWRCESCDKTHLRPEYRYIMLINVSDHTGQLWLSC 518
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
F+E +++G SADEL +++ + N +E R Y ++ R R
Sbjct: 519 FDEVGRQLLGISADELMDMRQ--SESNLAGEVFQEANCRTWNFRCRAKLDHYGDQPRIRY 576
Query: 594 TVRAVAPVDFAAESKFLLEEI 614
V + ++++ E+ L+ I
Sbjct: 577 QVSSAKAINYSEEASRLMNLI 597
>gi|303276565|ref|XP_003057576.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460233|gb|EEH57527.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 835
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 253/473 (53%), Gaps = 33/473 (6%)
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
P AR ++ P+ SLNPY WTI+ RVT+ +RTY N +G+G VFNVEL D +G
Sbjct: 215 GPTARNDAPAKISPISSLNPYNNRWTIRARVTNNPEIRTYHNHKGDGKVFNVELLDAEGG 274
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLR-VANKQFKTVQNDYEMNLNENSEVEEAV 281
+I+A F + A +F D F+ G VY +S+G +R V N +F ++EM L+ N+EV E +
Sbjct: 275 EIKAVAFGDTAERFADVFRAGSVYELSKGQIRPVRNPKFSV--GEFEMMLDHNTEVRE-I 331
Query: 282 NETAFIPQTK---FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
++ A + K + F I ++ +G+ LVD+ VV +V +I ++ E KR
Sbjct: 332 DDPAVVGSIKRVNYAFKKIADVDHISSGS-LVDVCAVVHHVGELNTIMKRDGGE-TSKRS 389
Query: 339 ITVADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
IT+ D++ ++ ++LW A ++G L L N P++AIK+ +VGDFQG ++ T+ S
Sbjct: 390 ITLRDDSGASIELTLWAPQALDIGGRLEGLVNDGDHPVIAIKNGRVGDFQGKNIGTINSS 449
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR-VSLTHITSNP 455
V ++PD+ EA +L+ WY++ G + + S A DR V++ +
Sbjct: 450 RVDINPDVDEAARLRHWYDTGGATAEVKAF-----SGAGASGGGGRGDRCVTIAQLKEEI 504
Query: 456 SLGDEKPVFF-SIKAYISLIK-PDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQK 507
+ P F+ + +++ +K D +Y AC + C KK+ G W C++
Sbjct: 505 ARDGATPAFWVQCRCHVTYLKSSDAGCFYPACPLRNGERMCQKKLRYDEAMGTW--NCER 562
Query: 508 NDEE----CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
+ E C RYI+ V D +G+ W+S F + + I+G +A L EL D +Y+
Sbjct: 563 HAGEHVPNCEWRYIINMTVADHTGQQWVSAFGDTGDVIMGMTAGALKELMDTNYD--AYE 620
Query: 564 MKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + + L++ VA YN+E R +V++ + +D+ +ESK +L++I K
Sbjct: 621 KAIADANFKQFLMKFKVADDTYNDETRVKVSLNKLDAIDYVSESKRMLDQIGK 673
>gi|331228428|ref|XP_003326881.1| hypothetical protein PGTG_08418 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309305871|gb|EFP82462.1| hypothetical protein PGTG_08418 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 618
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 184/631 (29%), Positives = 305/631 (48%), Gaps = 60/631 (9%)
Query: 20 DSSSDIPEIVVQVLDLKLTG--------NRYMFNASDGKKRLKAILPSNLSSEVISGNIQ 71
D + +I + VQV+ +K G R+ SDG+ + A+L + L+ V I+
Sbjct: 16 DQNLEIENLTVQVISIKSVGVSNVSSAPERWRIIISDGQMFITAMLATQLNHFVQENQIK 75
Query: 72 NKGLIRLLDYALNEIPTKSEKYLIVTKC------EVVSPALEMEIKIEVKSDESGIIFKP 125
++R+ Y +N I ++ L+ + E + + + + D S P
Sbjct: 76 KHSILRVPSYTVNVIGSRHVVVLLGVEVVQSDYPERIGNPVNCDAEANANKDNSNTKPAP 135
Query: 126 K----------QEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVH 175
+ +VK P I +KPK + ++ G + T
Sbjct: 136 AVLANRSNVAPPKPDVK---PDIDVKPKPSSYKPNIPASKPNKPG-------VRRTGNHI 185
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ ++P+ NW IK RV+ K ++ + N+RG+G +F+V D+ G QI+AT FN+A
Sbjct: 186 PIAGVSPFANNWKIKARVSQKTEIKRWSNSRGDGKLFSVTFLDDSG-QIRATGFNDAVDN 244
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN-F 294
YD Q G+VY ISRG + +A K + T +DYE+ +EVEE ++A P+ N
Sbjct: 245 LYDSLQEGQVYLISRGKITIAKKPYNTTGHDYEIVFENTTEVEEC-GDSADTPKIILNKL 303
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ EL V ++D++ V+++V I K+ + + KRDIT+ D++ ++ ++LW
Sbjct: 304 TKLSELND-VEKDAVIDVVAVLKDVGEISEIVSKATQKTIVKRDITLIDQSAYSIRMTLW 362
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ A A IVA + +KVGDF G +LS + S +LV+PD+PEA LK WY
Sbjct: 363 GKTAETF------EAPTESIVAFQGVKVGDFGGRNLSMISSSVMLVNPDIPEAFDLKGWY 416
Query: 415 ESEG---KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAY 470
++EG K S A+ G+G+G R + D + + LG +E+ +F+ +A
Sbjct: 417 DNEGVNAKIQSFANTGTGIG-------REITEDSLKTVAEIKDTQLGMNERGDYFNFRAT 469
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
I IK + + Y AC T CNKK+ + CE C K RY++ V D +G
Sbjct: 470 IMYIK-SETISYPACPTERCNKKLLRDGDDEWRCEKCDKLFPAPDHRYLIQMTVQDHTGT 528
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W+S FNE + I+ +A+EL +K D+ YQ + + T + + ++ YN+
Sbjct: 529 LWLSGFNEVGQIILPMNANELIGIKET--DEAQYQKIVTDATAKTYTMVCRAKEETYNDV 586
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
R + +V +APVD+ A L E + K S
Sbjct: 587 NRTKYSVLRIAPVDWVAAGLQLAETLLKNYS 617
>gi|453084498|gb|EMF12542.1| replication factor A 1, rfa1 [Mycosphaerella populorum SO2202]
Length = 624
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 295/597 (49%), Gaps = 40/597 (6%)
Query: 43 MFNASDGKKRLKAILPSNL----------SSEVISGNIQNKGLI-RLLDYALNEIPTKSE 91
M + G++R + + + S+ +I+ KG++ RL + N + K +
Sbjct: 35 MAQGAGGQERWRVVFSDTVNFIQGMISMQSNHLITEGTLKKGMVCRLKSFQANFV--KDK 92
Query: 92 KYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKD-----GPGIVLKPKQEM 146
LI+ +V+ E E + E G KP+ + EVK G +P+Q+
Sbjct: 93 HILIIIDLDVLQEYGEQEKLGTPVAIEGGQ--KPEAQAEVKPQPGNITGNNFYGQPQQKP 150
Query: 147 VAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNAR 206
A + R A+ + P+ +++PY WTIK R T KG+++T+ N
Sbjct: 151 QAPVKQEPQRSLPSRTNGASHNGPHGNITPIEAISPYTHKWTIKARCTHKGDIKTWHNKN 210
Query: 207 GEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQN 265
GEG +F+ DE G +I+ATMFN+ ++++ Q G VYYIS +++A KQF + N
Sbjct: 211 GEGKLFSANFLDESG-EIRATMFNDQVDQWHEVLQEGSVYYISSPCRVQLAKKQFSNLPN 269
Query: 266 DYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSI 325
DYE+ + VE+A + +PQ ++NF+ I+ L + V +D+IGVV V I
Sbjct: 270 DYELTFENQTLVEKAEDNDG-VPQVRYNFITIEAL-QTVEKDSTIDVIGVVSEVGEVNEI 327
Query: 326 RRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
K+ ++ KRD+T+ D+T V +++W + A + +A ++A K +KVGDF
Sbjct: 328 VSKTTSKPYSKRDLTLVDDTGYNVRLTIWGKTAESF------DAQPESVIAFKGVKVGDF 381
Query: 386 QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
G SLS L ++ V+P++ EA KLK WY + G + AS + + + G +D
Sbjct: 382 GGRSLSLLSSGSMNVNPEIDEAFKLKGWYSASGHNETFASHANTMSTAGATGGAGR-NDT 440
Query: 446 VSLTHI-TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT-----CNKKVTDALGSG 499
+++ + N + D+ +FS KA I IK D Y AC+T CNKKV +
Sbjct: 441 KTISQVRDENLGMTDDTD-WFSTKATIIYIKQDNFA-YPACQTTDPQPCNKKVLEVEEGN 498
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
+ CE C K+ RYI+ V D +G+ W+S F+E ++I+G A++L +K + GDD
Sbjct: 499 WRCEKCDKSWPSPKYRYIISVNVSDHTGQIWLSCFDEVGQQILGMPANDLMAMKEE-GDD 557
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ ++ R + +++R R V+ +D+ E+K L + I +
Sbjct: 558 KRVSEAFSDANCKSYIFRCKAKMDTFQDQQRVRYQVQYARTIDYVQEAKRLADIIKQ 614
>gi|452840129|gb|EME42067.1| hypothetical protein DOTSEDRAFT_72982 [Dothistroma septosporum
NZE10]
Length = 621
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 246/450 (54%), Gaps = 20/450 (4%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ +++PY WTIK R TSKG+++T+ N GEG +F+ D+ G +I+ T FN+A
Sbjct: 173 ITPIEAISPYTHKWTIKARCTSKGDIKTWHNKNGEGKLFSANFLDDSG-EIRMTGFNDAV 231
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
++YD Q G VYYIS ++ A KQF + NDYE+ +++++E+A + +PQ ++
Sbjct: 232 DQWYDTLQEGSVYYISSPCRVQPAKKQFSNLNNDYELTAEKDTQIEKAEDNDG-VPQVRY 290
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I L + + +D+IGV+Q+VS I K+ ++ KR++T+ D T V ++
Sbjct: 291 NFTTIAAL-QEIEKDSTIDVIGVLQDVSEVSEIVSKTTSKPYSKRELTLVDNTGYNVRLT 349
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W + A E LD +S +VA K +KV DF G SLS L ++ +PD+ EA KLK
Sbjct: 350 VWGKTA-----ETLDIQPES-VVAFKGVKVSDFGGRSLSLLSSGSMSANPDIEEAYKLKG 403
Query: 413 WYESEGKGTSMASIGSGLGSL-AKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
WY+ G+ + AS + + ++ A +G + +D ++ + + +FSIKA I
Sbjct: 404 WYDGAGRTENFASHANTMATVGATSGGKG--NDTKTIAQVRDEGLGMTDDTDWFSIKATI 461
Query: 472 SLIKPDQAMWYRACKT-----CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
+K D Y AC+T CNKKV + + CE C K+ + RYIM V D +
Sbjct: 462 IYVKQDNFA-YPACRTTDPQPCNKKVIENEPGNWRCEKCDKSWDAPKYRYIMSVNVSDHT 520
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G+ W+S F+E ERI+G A++L +K + GDD + RV +
Sbjct: 521 GQIWLSCFDEVGERIMGMPANDLMAMKEE-GDDKRVTDAFGDANCQTFNFRVKAKMDNFQ 579
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+++R R V+ P+DF+ E+ L + I +
Sbjct: 580 DQQRVRYQVQYANPLDFSREATKLAQIIKQ 609
>gi|312371186|gb|EFR19433.1| hypothetical protein AND_22425 [Anopheles darlingi]
Length = 621
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/463 (30%), Positives = 248/463 (53%), Gaps = 27/463 (5%)
Query: 159 NGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTD 218
NG +A A L+ T HP+ SL+PYQ W IK RV SK +RT+ NA+GEG +F++++ D
Sbjct: 170 NGTVA-GASLSDTL-THPISSLSPYQNKWVIKARVMSKSGIRTWSNAKGEGKLFSMDVMD 227
Query: 219 EDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
E G +I+ T F E ++YD ++ KVY+IS+ L+ ANKQ+ ++NDYEM + ++ V+
Sbjct: 228 ESG-EIRVTAFKEQCDRYYDMIEVDKVYFISKCQLKPANKQYSNLKNDYEMTMTNDTIVQ 286
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
E ++ +P+ ++NFVPI ++ + VD+IGV + S + K++ + KR+
Sbjct: 287 ECKDKDGSMPEIQYNFVPIAQIAN-LEPNATVDVIGVCKEASEVVQFTAKTSGRELRKRE 345
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRST 397
T+ D + V ++LW + A N A +P+V ++ +V +F G +L +G S
Sbjct: 346 ATLVDSSNAAVQLTLWGDDAQNF------PASSNPVVLVRGARVSEFGGGKTLGLIGGSV 399
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
+ ++PD+ A +++ W+E+ G+ S+AS+ + + ++ ++ S+ SL
Sbjct: 400 MKLNPDMEAAHRVRGWFENGGRDASLASVSA---RTGAGAGAGLNTEWLTFRE-ASDRSL 455
Query: 458 G-DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSL 514
G +KP +F +KA I IK A+ Y+AC CNKKV D Y CE C
Sbjct: 456 GAGDKPDYFQVKAMIHTIKSQNAV-YKACPQADCNKKVIDQDNGQYRCEKCNAEFPNFKY 514
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN---ELKSQLGDDNSYQMKLKEVTW 571
R ++ + D + W+++F E AE + G S+ E+ E +++ + M K
Sbjct: 515 RLLVNMLIGDWTSNRWVTMFTELAEEVFGKSSQEIGSMLEFQTEEAEKLFTSMCFKSF-- 572
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ ++ + YN + R + T + APV+ + L++ I
Sbjct: 573 ---IFKLRTKVEFYNEQARNKTTAVSAAPVNHKEYNALLIKSI 612
>gi|330930966|ref|XP_003303215.1| hypothetical protein PTT_15345 [Pyrenophora teres f. teres 0-1]
gi|311320921|gb|EFQ88698.1| hypothetical protein PTT_15345 [Pyrenophora teres f. teres 0-1]
Length = 587
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 250/451 (55%), Gaps = 26/451 (5%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ SL+PY WTI+ R T+K +M+ + NA+G G +F+V L D+ G +I+AT F E A
Sbjct: 144 LYPIESLSPYAHKWTIRARCTAKSDMKEWTNAKGAGKLFSVNLLDDTG-EIRATAFTEVA 202
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
K Y F++G VYYIS + +A KQF + NDYE+ ++EVE+A ++ PQ +F
Sbjct: 203 DKLYPIFEVGTVYYISAPCRVTLAKKQFSNLPNDYELQFERDTEVEKAEDQEN-KPQIRF 261
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I +L V +D IGV++ V+ +I K+ N+ KR++T+AD+++ +V ++
Sbjct: 262 NFTKIGDLSS-VEKDTTIDTIGVLKEVADVTTITSKTTNKDFSKRELTLADDSQTSVRLT 320
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W + A + L I+A K +KV DF G SLS L +++V PD+ +A +L+
Sbjct: 321 IWGKTAESFDAPL------ESIIAFKGVKVSDFGGRSLSLLSSGSMMVDPDIDDAHRLRG 374
Query: 413 WYESEGKGTSMAS---IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
W+++ G+ + ++ + S G +KN A+ ++ I + + P + S++A
Sbjct: 375 WFDAVGQNATFSTHQNMASAAGG-SKNDAKI-------ISVIMEEEAYLQDTPTYMSLRA 426
Query: 470 YISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+ +K + + Y AC T CNKKV + +WCE CQ + E RY++ V D +G
Sbjct: 427 SVLYVK-NTTVAYPACSTQGCNKKVIEDNPGNWWCEKCQASFPEPQYRYVLSVNVGDHTG 485
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNS--YQMKLKEVTWVPHLLRVSVAQQEY 585
W+S F+E I+G SA+E +LK ++ + + ++E T RV + Y
Sbjct: 486 TLWLSCFDEAGAEIVGMSANEAMKLKMDDEENGTTNFITAMQEATCQTFNFRVRAKMETY 545
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ + R V ++ +++A E+ L + I +
Sbjct: 546 QDQPKPRYQVLSLHKLNYAQEANKLAQLIKQ 576
>gi|378731776|gb|EHY58235.1| replication factor A1 [Exophiala dermatitidis NIH/UT8656]
Length = 608
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 296/597 (49%), Gaps = 63/597 (10%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+R +F SD K ++ +L + +S V ++ L++L+ Y+ N + K ++ LIVT
Sbjct: 51 HRVIF--SDTKNYIQTMLAVHQNSLVDQKILRRGVLVQLVGYSANRV--KGKRILIVTDI 106
Query: 100 EVVSPALEMEIKIEVKSDE---------------SGIIFKPKQEDEVKKDGPGIVLKPKQ 144
+V+ E + + K E S + KQE +PKQ
Sbjct: 107 KVLEDYGEHDKLGDPKPLELKTEEEEKPAPNTITSNGFYGNKQE------------QPKQ 154
Query: 145 EMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKN 204
R + P++ A ++P+ +++PY WTIK R TSK ++T+ N
Sbjct: 155 N----------RSMPSHTKPSSSSAHAN-IYPIEAISPYSNKWTIKARCTSKSEIKTWHN 203
Query: 205 ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTV 263
GEG +F+V L DE G +I+AT FN+ + YD FQ G+VYYIS + A KQF +
Sbjct: 204 RNGEGKLFSVNLLDESG-EIRATGFNDQCDQLYDVFQEGQVYYISSPCRVTFAKKQFSNL 262
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
NDYE++ ++ VE+A E +PQ ++NF I +L + V +DII ++++V
Sbjct: 263 ANDYELHFERDTVVEKA-EEQDGVPQVRYNFTNIADL-QSVEKDTTIDIIAILKDVGEVG 320
Query: 324 SIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG 383
K+ + KR++T+ D T +V +++W + A ++ + +V K +KV
Sbjct: 321 QATSKTTGKPYEKRELTLVDNTGYSVRMTIWGKTAASL------DVQPGSVVVFKGVKVS 374
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS 443
DF G SLS L ++ +PD+PEA KLK W+ES + + ++ + G+++ G+R S
Sbjct: 375 DFGGRSLSLLSSGSMTANPDMPEAHKLKGWWESHDRPGNFSTHENVQGAVSGVGSR---S 431
Query: 444 DRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGY 500
D LG EKP FFSIKA + IK + Y AC + CN+KV + + G
Sbjct: 432 DPFKTISQVKEEQLGMSEKPDFFSIKATVHYIK-QEPFAYPACLSEGCNRKVVE-IDPGQ 489
Query: 501 W-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
W CE C + RYI+ A V D +G+ W++ F++ ++G +ADEL +K + D
Sbjct: 490 WRCEKCDTTHPKPEYRYIISANVSDHTGQLWVNCFDDTGRLLLGRTADELMAIKDE--DQ 547
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ E + + + ++R R V + AP+DF ES L+ I +
Sbjct: 548 KQVEEIFSEANYKTWNWKCKARLDNFQEQQRVRYQVTSAAPLDFVTESNKLITLIKQ 604
>gi|302841268|ref|XP_002952179.1| hypothetical protein VOLCADRAFT_105399 [Volvox carteri f.
nagariensis]
gi|300262444|gb|EFJ46650.1| hypothetical protein VOLCADRAFT_105399 [Volvox carteri f.
nagariensis]
Length = 499
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 245/472 (51%), Gaps = 24/472 (5%)
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT 217
+N P+ L+ + H + L+PY NW IK +V K +R+ + + V+L
Sbjct: 36 KNALTPPSTSLSDRKNYHKIAQLHPYDSNWCIKAKVELKAPLRSMSIRGSDVKILTVDLV 95
Query: 218 DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV 277
D+ G IQ T + A +F + GKVY R ++ A+K++ +V+ DY+++ E +EV
Sbjct: 96 DDTGQMIQGTFWRAPAERFSESLMEGKVYVFHRFKVKPADKKYSSVKADYQIDFTERTEV 155
Query: 278 EEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKR 337
EA ++ PI+ L R V G VD++GVV + P +++RK+++ +P+R
Sbjct: 156 TEAADQDTSSMTAAVEITPIEVLPRRVGGRMPVDVMGVVLALGPLGTVKRKADSSELPRR 215
Query: 338 DITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST 397
DIT+ D + ++V ++LW + A+ + L+ + ++ + ++V DF G S+S+L +S
Sbjct: 216 DITLGDMSCKSVVLTLWGDNASAFAGQ-LEGQEGKVVMQVTHVRVTDFNGCSVSSLTKSV 274
Query: 398 VLVSPDLPEAKKLKSWYESEG-------------KGTSMASIGSGLGSLAKNGARSMYSD 444
V ++P+ A +L +WY + G GT S GSG +R +
Sbjct: 275 VSLNPEGSGAAQLLTWYSTAGMVPDRFTPVGQDLPGTRAVSNGSGAVP-----SRERFFT 329
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEG 504
+ I+++ SL D+K F ++ AYI+++ + M+Y A +KV D G G W E
Sbjct: 330 VKDVAGISAD-SLQDDKATFQAVTAYIAMVNSELQMYYLANPENGRKVVDQ-GGGRWAEA 387
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQM 564
+ E RY++ ++ D +GEA + +FN+EAE ++G ADEL LK + G+ ++
Sbjct: 388 DGRVVERPEHRYVLSVKLADHTGEAVVQLFNKEAEAVMGIKADELAALK-EAGE--GFEA 444
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
L+ W P + V +EYN E+R R T V +D+ +E + L I K
Sbjct: 445 ALRAAQWRPWSVVVMSKAREYNGERRVRHTAHRVDTLDWVSEGQRLAMLIGK 496
>gi|402222443|gb|EJU02510.1| hypothetical protein DACRYDRAFT_78925 [Dacryopinax sp. DJM-731 SS1]
Length = 602
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 225/444 (50%), Gaps = 15/444 (3%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ L+PYQ WTIK RVT+K ++R + N +GEG +F+ L DE ++I+AT FN+
Sbjct: 167 IFPIEGLSPYQNKWTIKARVTNKSDIRHWSNQKGEGKLFSFTLMDET-SEIRATAFNQQV 225
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+FYD Q GKVY+ S+G + A +QF V N YE+ N+EVE + + +P+ K+
Sbjct: 226 DEFYDMIQEGKVYFFSKGRIGPAKRQFNNVSNLYEITFERNTEVEPCL-DAGDVPEVKYQ 284
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV ++ L + V D+IGVV V I K+ VPKRDI++ D + ++L
Sbjct: 285 FVTLEGL-QEVPKDATCDVIGVVTEVGELGEILAKATGRSVPKRDISIVDRSGFFCRLTL 343
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W + A PI+A K ++V DF G SLS S + ++PD+P+A +L+ W
Sbjct: 344 WGKSGETF------QAPDQPIIAFKGVRVSDFNGRSLSFQSSSQMSINPDIPDAHQLRGW 397
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYIS 472
Y+S G + S G+ A + + + LG EK FF+ KA +
Sbjct: 398 YDSIGNNQPHHTFSSAAGAGAGGDRGQFNRNELKTIAQVKDEGLGMGEKNDFFTTKASVI 457
Query: 473 LIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
+K + + Y AC++ CNKKV + C C +E RY++ V D +G+AW
Sbjct: 458 HVKQENFV-YPACRSEKCNKKVVQTSDGRWECVSCGLTFDEPEYRYLLSISVADHTGQAW 516
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+S FN+ + + A EL LK D+ + + +V + Q YN++ +
Sbjct: 517 LSAFNDAGDMLFEMKAGELQNLKDT--DETHFSKVMSDVRSKMYNFSCRARQDTYNDQTK 574
Query: 591 QRVTVRAVAPVDFAAESKFLLEEI 614
R + + +D E K L++ +
Sbjct: 575 VRYNITRMTKIDLKTEMKALVDNM 598
>gi|296828318|ref|XP_002851311.1| replication factor-A protein 1 [Arthroderma otae CBS 113480]
gi|238838865|gb|EEQ28527.1| replication factor-A protein 1 [Arthroderma otae CBS 113480]
Length = 599
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 176/625 (28%), Positives = 308/625 (49%), Gaps = 40/625 (6%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG----NRYMFNASDGKKRLKAI 56
M +S ++S + + P +P+ ++Q L +K R+ SD ++ +
Sbjct: 1 MANQISTGSLSAMFDDTKPK----VPQPILQCLRIKPVTVREQERFGVVFSDVVNFVRTM 56
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
LP+ L++ V G ++ +RL ++ ++ + K + LI+ EV+S E E + K
Sbjct: 57 LPTQLNNYVTEGLLRRGSFVRLTNFQVSVV--KGKHLLIIMGLEVLSALGEAERIGDPKP 114
Query: 117 DESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRD-QNGNMAPAARLAMTRRVH 175
E PK D++ G L + A A + QN + +
Sbjct: 115 LE------PKSGDDM--GGQSTTLSSNEFYNAPQAQNPPQHFQNVQRPRTTGMTTNANIF 166
Query: 176 PLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+ +L+P+ N WTIK R T K +++T+KN GEG +F+V L D+ G +I+AT F +
Sbjct: 167 SIEALSPFANNKWTIKARCTHKSDIKTWKNTYGEGKLFSVNLLDDSG-EIRATAFKDQCD 225
Query: 235 KFYDRFQLGKVYYISR-GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
Y F+ G VYYIS T+++A K++ V NDYE+ + ++ VE+A ++ +PQ +FN
Sbjct: 226 LLYPVFEEGSVYYISSPCTVKMAKKEYSNVNNDYELTFDRDTVVEKAEDQND-VPQVRFN 284
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F + L GT +D++G+++ V T + K+ + KR++T+ D + +V +++
Sbjct: 285 FTGLGNLQSIEKGT-TIDVLGILKEVDTTSQVTSKTTGKPYDKRELTLVDNSGFSVRLTV 343
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W AT D +S +VA K +KV DF G +LS L ++ V PD+ EA +LK W
Sbjct: 344 WGNTATT-----FDTPPES-VVAFKGVKVSDFGGRTLSLLSSGSITVDPDIEEAHRLKGW 397
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
Y+++GK + S GS G+ + +++ I E P F++KA +
Sbjct: 398 YDAQGKSNFFTAYSSEGGSGGGGGSWPTFK---TISEIRDEQVPTAENPENFALKATVIH 454
Query: 474 IKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
+K + + Y AC + C NKK+T + CE C+++ RYI+ D +G+ W
Sbjct: 455 VKDN--LCYPACPNEACKNKKMTGGDLEQWHCERCERSYANPKYRYILSLNASDHTGQIW 512
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+S F+E + I G +AD+L +K D+ + K T+ + Y ++R
Sbjct: 513 LSCFDEAGQAIFGMTADKLMRIKED--DEVAANEITKGATYCTWNFKCRAKLDTYQEQQR 570
Query: 591 QRVTVRAVAPVDFAAESKFLLEEIS 615
R V A P+D++ E+ L + I+
Sbjct: 571 TRYNVYAATPIDYSTEADQLSKLIA 595
>gi|347965864|ref|XP_321709.4| AGAP001421-PA [Anopheles gambiae str. PEST]
gi|333470320|gb|EAA01767.4| AGAP001421-PA [Anopheles gambiae str. PEST]
Length = 612
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 242/449 (53%), Gaps = 29/449 (6%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
HP+ SL+PYQ W IK RV SK +RT+ NA+GEG +F++++ DE G +I+ T F E
Sbjct: 176 THPISSLSPYQNKWVIKARVMSKSGIRTWSNAKGEGKLFSMDVMDESG-EIRITAFKEQC 234
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
++YD ++ KVY+IS+ L+ ANKQ+ +++NDYEM + ++ V+E + +P+ ++N
Sbjct: 235 DRYYDMIEVDKVYFISKCQLKPANKQYTSLKNDYEMTMTNDTIVQECKDADGSMPEIQYN 294
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FVPI ++ + +VD+IG+ ++ S + K++ + KR+IT+ D + +V ++L
Sbjct: 295 FVPISQIAN-MEPNAMVDVIGMCKDASDVVQFTAKTSGRELRKREITLVDSSNASVQLTL 353
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLKS 412
W + A N A P+V +K +V +F G SL +G S + ++PDL A K++
Sbjct: 354 WGDDAQNF------PATTHPVVLLKGARVSEFGGGKSLGLIGGSVMKLNPDLEMAHKVRG 407
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
W+E+ G S++S+ + G GA + ++ +S +KP +F +KA I
Sbjct: 408 WFENGGSEASVSSVSARTG-----GAAGVSTEWLSFQEAKDKNLGAGDKPDYFQVKAMIH 462
Query: 473 LIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
IK A+ Y+AC CNKKV D + CE C R ++ + D + W
Sbjct: 463 TIKSANAV-YKACPQADCNKKVIDQENGQFRCEKCNAEFPNFKYRLLVNMLIGDWTSNRW 521
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE-----VTWVPHLLRVSVAQQEY 585
+++F E AE ++G S+ E +G YQ + E +++ + ++ + +
Sbjct: 522 VTVFTELAEEMLGKSSQE-------IGSSLEYQKEEAEKLFTSISFKSFVFKLRTKVEYF 574
Query: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ R + + +VAPV+ + L++ I
Sbjct: 575 GEQPRNKTSAVSVAPVNHKEYNALLIKSI 603
>gi|224006215|ref|XP_002292068.1| replication protein a [Thalassiosira pseudonana CCMP1335]
gi|220972587|gb|EED90919.1| replication protein a [Thalassiosira pseudonana CCMP1335]
Length = 570
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 287/609 (47%), Gaps = 63/609 (10%)
Query: 29 VVQVLDLKLTGN-----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYAL 83
VVQV+ LK R+ SDG + +L + L+ V S I ++ + D+ +
Sbjct: 2 VVQVIHLKKIDKSGGDERWKVILSDGTLHVSGMLATQLNPLVASSQITTNSILTVKDFII 61
Query: 84 NEIPTKSEKYLIVTKCEV--VSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLK 141
N + + +K I+ EV V+P I P+ +++K GP
Sbjct: 62 NTMGS-GQKVCILLNVEVNGVNPGNR--------------IGSPQ---DIQKVGP----- 98
Query: 142 PKQEMVAKSAAQIL----RDQNGNMAPAARL-AMTRRVHPLVSLNPYQGNWTIKVRVTSK 196
A AQ + + N AP R A + V P+ LN Y W I+ +VT+K
Sbjct: 99 ---NTTATGGAQPMYGNVQANNNGSAPIVRTTADGQPVTPISGLNMYSNRWVIRAKVTNK 155
Query: 197 GNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
+++T+ NA+GEG +F+V L D G ++ T F EA KFY+ + G+VY S G L+VA
Sbjct: 156 SDVKTWSNAKGEGSLFSVTLLDSSGYDVKCTFFKEAVDKFYNMLEEGRVYTFSGGRLKVA 215
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
N + ++ +E+ ++NSE+ E A I + ++FV I EL + VDI+ VV
Sbjct: 216 NMAYNNCKSQFEITFDQNSEIHLDA-EGAEI-RENYDFVKIAEL-ENMEPNSYVDILAVV 272
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
++V +I K + + + K D+ V D++ V ++LW A N + + P+VA
Sbjct: 273 KHVGDVSTIVSKKSGKEMTKVDLVVEDDSGADVKLTLWGNSAQNAENQFAN----CPVVA 328
Query: 377 IKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKN 436
K ++GD+ G SLS G T V+P +P+ +L W+ S G + S+ S G +
Sbjct: 329 FKKSRLGDYGGRSLSG-GSPT--VNPQIPQTNQLMQWWGSNGNKSQSRSLSSSGGGKGPD 385
Query: 437 GARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK----PDQAMWYRACKTCNK-- 490
R + I +KP + S KA I+ +K D WY AC +
Sbjct: 386 PLEK----RKDVCSIKEEHLGNSDKPDWLSFKATITFLKREKQGDDGAWYTACANSGEPC 441
Query: 491 ----KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCS 545
K T Y C+ CQ+ C R+I V D + +WIS+FNE+AE + G +
Sbjct: 442 RNMFKATQTSDGNYHCDKCQQTHPNCVRRFIFSGTVADDTSTSWISMFNEQAETLFNGMT 501
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
AD L + + GD + Y + T+ + + V Q+ +E R + +V ++ PVD+A
Sbjct: 502 ADNLYQQSIEQGDKDFYDSTFLKATYTEWVFKCKVKQEMVGDETRIKTSVASLVPVDYAK 561
Query: 606 ESKFLLEEI 614
ES+ LL +
Sbjct: 562 ESRALLSSL 570
>gi|449299904|gb|EMC95917.1| hypothetical protein BAUCODRAFT_71964 [Baudoinia compniacensis UAMH
10762]
Length = 613
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 238/446 (53%), Gaps = 19/446 (4%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+HP+ +L+PY WTIK R T KG ++T+ N GEG +F+V D+ G +I+AT FN+A
Sbjct: 170 IHPIEALSPYAHRWTIKARCTHKGEIKTWHNKNGEGKLFSVNFLDDSG-EIRATGFNDAV 228
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
++Y+ Q G VYY+S + +A KQF + NDYE+ ++++E+A E +PQ ++
Sbjct: 229 DQWYEVLQEGSVYYVSSPCKVGLAKKQFSNLNNDYELTFERDTQIEKA-EEQDGVPQVRY 287
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF + +L + V+ +D IG+++ V I K++++ KR++T+ D T V ++
Sbjct: 288 NFTSLADL-QSVDKDSTIDCIGILKEVGEVSEIVGKTSSKPYSKRELTLVDNTNYNVRLT 346
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
+W + A N +A +VA K LKV DF G SLS L ++ + PD+ EA KLK
Sbjct: 347 VWGKTAENF------DAQPESVVAFKGLKVSDFGGRSLSLLSSGSMNIDPDIDEAYKLKG 400
Query: 413 WYESEGKGTSMASIGSGLGS--LAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
WY++ G+ AS + + + G R+ Y + N +G++ +FS+KA
Sbjct: 401 WYDASGRNEEFASHANTMSTAVATAGGDRNAYKTIAQVR--DENLGMGEDTD-WFSVKAT 457
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
I +K D Y AC + CNKKV + + CE C + RYIM V D +G+
Sbjct: 458 IIYVKQDNFA-YPACISDGCNKKVIEHEPGQWRCEKCDTSHPRADWRYIMSVNVSDHTGQ 516
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W+S FNE + I+G +EL+ L+ + ++ +E + + + ++
Sbjct: 517 MWLSCFNEVGQLIMGMDGNELHALQEAM-EEKKLAEAFQEANCKTFVFKCKAKMDTFQDQ 575
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEI 614
+R R V+ P++F ESK L + I
Sbjct: 576 QRVRYQVQYANPLNFQIESKKLADLI 601
>gi|426196046|gb|EKV45975.1| hypothetical protein AGABI2DRAFT_193885 [Agaricus bisporus var.
bisporus H97]
Length = 591
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 173/600 (28%), Positives = 294/600 (49%), Gaps = 58/600 (9%)
Query: 25 IPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRL 78
+ E VVQ L +K G+RY SDGK ++A+L + +S V + I+ + +
Sbjct: 26 LREHVVQFLSVKKVNATGGAGDRYRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAI 85
Query: 79 LDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGP-- 136
+ N + K + +IV ++ E I P+ D V GP
Sbjct: 86 ERASSNTVQGK--RLVIVLSLRILGYPNEK-------------INNPQALDPVNS-GPDQ 129
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSK 196
+ + Q+ + +A P+ +L+PYQ NWTIK RVT K
Sbjct: 130 NASAEAPPAPAPGGSRQVNKPNTSGVA----------TFPIENLSPYQNNWTIKARVTQK 179
Query: 197 GNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
+++ + N+RGEG +F+V L D+ G +I+AT FN + + R + KVYYIS+ + A
Sbjct: 180 SDIKNWSNSRGEGKLFSVTLMDDSG-EIKATAFNSVVDELFPRLEDSKVYYISKARVNFA 238
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
K+F V NDYE+ L ++++ E +ET +P+ ++ FV +++L +N + D+IGV+
Sbjct: 239 KKKFSNVTNDYELTLERSTQITEC-HETTGLPEMRYTFVGLEKL-ENLNKDAICDVIGVL 296
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+++S I ++ N KR++T+ D++ ++ ++LW + A + E I A
Sbjct: 297 KDISAVSEITARTTNRSFQKRELTLVDKSGCSIQLTLWGKQAESFTGE------PGSIGA 350
Query: 377 IKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS----IGSGLGS 432
K +KVGDF G+SLST + + + P + + L+ W++S+G S S G G
Sbjct: 351 FKGVKVGDFGGVSLSTTPSTHIQLDPHIQDCYTLRGWWDSQGSDMSFQSKTVIGGGGGLG 410
Query: 433 LAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNK 490
+A N A+ + + + +GD K F + I I+ DQ + Y AC CNK
Sbjct: 411 IAFNRAQVRSLNEIKEAEV----GMGD-KADTFCCQGTIVHIR-DQNLLYPACPGNNCNK 464
Query: 491 KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
K++ + G + C+ C N E RYI+ V D SG+AW+ FNE A + G S +EL
Sbjct: 465 KMSMS-GDTWVCDKCGTNAETPEYRYILSMAVADWSGQAWLQGFNEAAVIVFGMSGNELY 523
Query: 551 ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
+LK + D++ Y + + + + Y + R R + + VD+ AE+++L
Sbjct: 524 DLK--MRDEDKYNAVIHKAHCQTYNFACRAKKDSYEDRVRIRYGISRIEKVDYHAEAQYL 581
>gi|409079138|gb|EKM79500.1| hypothetical protein AGABI1DRAFT_114047 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 591
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 173/600 (28%), Positives = 294/600 (49%), Gaps = 58/600 (9%)
Query: 25 IPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRL 78
+ E VVQ L +K G+RY SDGK ++A+L + +S V + I+ + +
Sbjct: 26 LREHVVQFLSVKKVNATGGAGDRYRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAI 85
Query: 79 LDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGP-- 136
+ N + K + +IV ++ E I P+ D V GP
Sbjct: 86 ERASSNTVQGK--RLVIVLSLRILGYPNEK-------------INNPQALDPVNS-GPDQ 129
Query: 137 GIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSK 196
+ + Q+ + +A P+ +L+PYQ NWTIK RVT K
Sbjct: 130 NASAEAPPAPAPGGSRQVNKPNTSGVA----------TFPIENLSPYQNNWTIKARVTQK 179
Query: 197 GNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
+++ + N+RGEG +F+V L D+ G +I+AT FN + + R + KVYYIS+ + A
Sbjct: 180 SDIKNWSNSRGEGKLFSVTLMDDSG-EIKATAFNSVVDELFPRLEDSKVYYISKARVNFA 238
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
K+F V NDYE+ L ++++ E +ET +P+ ++ FV +++L +N + D+IGV+
Sbjct: 239 KKKFSNVTNDYELTLERSTQITEC-HETTGLPEMRYTFVGLEKL-ENLNKDAICDVIGVL 296
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+++S I ++ N KR++T+ D++ ++ ++LW + A + E I A
Sbjct: 297 KDISAVSEITARTTNRSFQKRELTLVDKSGCSIQLTLWGKQAESFTGE------PGSIGA 350
Query: 377 IKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS----IGSGLGS 432
K +KVGDF G+SLST + + + P + + L+ W++S+G S S G G
Sbjct: 351 FKGVKVGDFGGVSLSTTPSTHIQLDPHIQDCYTLRGWWDSQGSDMSFQSKTVIGGGGGLG 410
Query: 433 LAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNK 490
+A N A+ + + + +GD K F + I I+ DQ + Y AC CNK
Sbjct: 411 IAFNRAQVRSLNEIKEAEV----GMGD-KADTFCCQGTIVHIR-DQNLLYPACPGNNCNK 464
Query: 491 KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
K++ + G + C+ C N E RYI+ V D SG+AW+ FNE A + G S +EL
Sbjct: 465 KMSMS-GDTWVCDKCGTNAETPEYRYILSMAVADWSGQAWLQGFNEAAVIVFGMSGNELY 523
Query: 551 ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
+LK + D++ Y + + + + Y + R R + + VD+ AE+++L
Sbjct: 524 DLK--MRDEDKYNAVIHKAHCQTYNFACRAKKDSYEDRVRIRYGISRIEKVDYHAEAQYL 581
>gi|444516397|gb|ELV11146.1| Replication protein A 70 kDa DNA-binding subunit [Tupaia chinensis]
Length = 474
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 243/486 (50%), Gaps = 69/486 (14%)
Query: 148 AKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
A A++I G +V P+ SL PYQ WTI RVT+K +RT+ N+RG
Sbjct: 43 AYGASKIFGKAGGASLSNTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRG 102
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
EG +F +EL DE G +I+AT FNE KF+ ++ KVYY S+GTL++ANKQF TV+NDY
Sbjct: 103 EGKLFAIELVDETG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTTVKNDY 161
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRR 327
EM N + V ++ +P +F+F IDEL + LVDIIGV ++ I
Sbjct: 162 EMTFNNETSVMPCEDD-HHLPTVQFDFTKIDEL-ESKSKDSLVDIIGVCKSYEDATKITV 219
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG 387
KS N V KR+I + D + + VT +LW E A + + P++A+K +V DF G
Sbjct: 220 KSTNREVSKRNIYLMDTSGKVVTTTLWGEDADKF------DGSRQPVLAVKGARVSDFGG 273
Query: 388 ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNGARSMYSD 444
SLS L STV+++PD+PEA KL+ W++SEG+ G S++ + SG G + +++Y
Sbjct: 274 RSLSVLSSSTVIMNPDIPEAYKLRGWFDSEGQALDGVSISDLKSGGGIGSNTNWKTLYEV 333
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWC 502
+ + N GD K +FS A + ++ + M Y+AC + CNKKV D Y C
Sbjct: 334 K------SENLGQGD-KADYFSSVATVVYLRKENCM-YQACPNQDCNKKVIDQQNGLYRC 385
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E C + E + +Y M+ L ++ ++
Sbjct: 386 EKC--DSEFPNFKYRMI------------------------------------LSNEQAF 407
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYN---------NEKRQRVTVRAVAPVDFAAESKFLLEE 613
+ + + ++ V + YN +E R + TV V PVD+ + L+
Sbjct: 408 EEVFQNANFRSFTFKIRVKLETYNVQTAFLFSKDESRIKATVMDVKPVDYREYGRRLIMN 467
Query: 614 ISKKVS 619
I K +
Sbjct: 468 IRKNAA 473
>gi|218195961|gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 237/462 (51%), Gaps = 68/462 (14%)
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
PA+R R+ P+ +LNPYQ WTIK RVT+K ++R + NAR G VF+ +L D G
Sbjct: 382 GPASRNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFDLLDAQGG 441
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNEN-SEVEEAV 281
+I+A + E+A KF+ + ++G+VY ISRG+L+ A K++ T+ +DYE+ L+ S VE
Sbjct: 442 EIRAQCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEVCS 501
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
++ IP+ ++NF I EL N T +VD++GVV +VSP+ +I RK E KR I +
Sbjct: 502 DDDNSIPRLQYNFRQISELENMANET-IVDLLGVVTSVSPSATIMRKIGTE-TRKRSIQL 559
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS 401
D + R++ V+LW G +V DF G S+ST G + ++++
Sbjct: 560 KDLSGRSIEVTLWGNFCDAEG-----------------ARVADFNGKSVSTSGSTQLIIN 602
Query: 402 PDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-E 460
PD PE ++L+ WY +EGK S+ + ++ + AR + + +LG E
Sbjct: 603 PDFPEVERLRQWYMTEGKTAPCISLSREMLNMGRTDARKTIAQ-------IKDENLGRLE 655
Query: 461 KPVFFSIKAYISLIKPDQAMWYRAC-------KTCNKKVTDALGSGYW-CEGCQKNDEEC 512
KP + ++KA IS + ++ Y AC + CNKK + G G W C+ C ++ +
Sbjct: 656 KPDWITVKAAISHVT-TESFCYPACPKLLPVGRQCNKKAINN-GDGMWHCDRCDESFQNP 713
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWV 572
RY++ ++ D +G + S F+E R W
Sbjct: 714 EYRYMLRFQIQDHTGSTYASAFDEAGVR------------------------------WH 743
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+L ++ V ++ YN+E+ + T V +D + ES LL I
Sbjct: 744 LYLFKLKVKEETYNDEQSLKCTAVKVEKLDPSKESNVLLGAI 785
>gi|156048933|ref|XP_001590433.1| hypothetical protein SS1G_08173 [Sclerotinia sclerotiorum 1980]
gi|154692572|gb|EDN92310.1| hypothetical protein SS1G_08173 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 609
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 239/448 (53%), Gaps = 25/448 (5%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
++P+ SL+PY WTIK RVTSK ++RT+ EG +F+V L DE G +I+AT FNE
Sbjct: 174 IYPIESLSPYAHKWTIKARVTSKSDIRTWHKQNSEGKLFSVNLLDESG-EIKATGFNEQC 232
Query: 234 RKFYDRFQLGKVYYI-SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
Y+ FQ G VYYI S +++A KQF + NDYE+ ++ VE+A ++ +PQ ++
Sbjct: 233 DALYELFQEGNVYYITSPCRVQIAKKQFSNINNDYELMFERDTLVEKAEDQDN-VPQVRY 291
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NF I +L + + VD+I V++ V T I K+ N+ KR++T+ D+T +V ++
Sbjct: 292 NFSNIGDL-QTIEKDSTVDLIAVLKEVGETSEIMSKTTNKPYSKRELTLVDDTGYSVRLT 350
Query: 353 LWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
+W + AT+ D SP IVA K +KV DF G SLS L ++ PD+ EA +L
Sbjct: 351 VWGKTATSF--------DASPESIVAFKGVKVSDFGGRSLSLLSSGSMSFDPDIQEAHRL 402
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG--DEKPVFFSIK 468
K WY+S+G+ + AS ++A GA D + + LG +E +FS +
Sbjct: 403 KGWYDSQGRTENFAS----HSNMASAGAAGGRQDPLKTVAQIKDEGLGMSEENTDYFSTR 458
Query: 469 AYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
A I IK + Y +C + C+KKV + + CE C + + RYI+ V D +
Sbjct: 459 ATIVYIK-QETFCYPSCINENCSKKVVEENDGTWRCEKCNQTHPKPEYRYILSLNVNDHT 517
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G+ W++ F+E I+G SADE+ ELK D ++ + + + +
Sbjct: 518 GQLWLTAFDEVGRLIMGMSADEMMELKEN--DQSALEKAFDDANCKMMTFKCRAKTDNFK 575
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ R R V + + V++ A++ L E I
Sbjct: 576 EQARVRYQVNSASAVNYGADALKLAELI 603
>gi|296088465|emb|CBI37456.3| unnamed protein product [Vitis vinifera]
Length = 754
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 239/462 (51%), Gaps = 66/462 (14%)
Query: 171 TRRVHPLVSLNPYQGNW-------TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
T VH LV+L Q W + ++ T+KG +R Y N RG+G VF+ +L D DG +
Sbjct: 123 TAGVHSLVALLLNQ-IWLGLSLHISSHLQFTAKGELRHYNNPRGDGKVFSFDLLDSDGGE 181
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+ T FN A +FY++ + GKVY IS+G+L+ A K F ++ND+E+ L S ++ ++
Sbjct: 182 IRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDD 241
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
IP+ +F+F I ++ N + +VD+IGVV +SP+ SI RK+ E KR + + D
Sbjct: 242 DNSIPRQQFHFRSISDVESMENNS-VVDVIGVVSFISPSASIMRKNGTE-TQKRALHLKD 299
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
+ R+V ++LW GQ L + L T+ S + + PD
Sbjct: 300 MSGRSVELTLWGNFCNAEGQRLQN---------------------MLGTISTSQLFIEPD 338
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKP 462
PEA+KLK W++ EG+ T SI + S+ + R S + LG EKP
Sbjct: 339 FPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQ-------IKDERLGTSEKP 391
Query: 463 VFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLR 515
+ ++ A +S IK D Y AC + CNKKVT+ G G W CE C ++ ++C R
Sbjct: 392 DWITVCATVSFIKVDN-FCYTACPIMIGDRQCNKKVTNN-GDGKWRCERCDQSVDDCDYR 449
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
YI+ ++ D +G W++ F +E E+ DD + L+ V + +
Sbjct: 450 YILQFQIQDHTGLTWVTAF-QECEQ-----------------DDEKFGEILRGVLFTKYS 491
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKK 617
++ V ++ +++E+R + TV V+F++ES+FLL+ + K
Sbjct: 492 FKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKH 533
>gi|291221744|ref|XP_002730881.1| PREDICTED: replication protein A1-like [Saccoglossus kowalevskii]
Length = 585
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/623 (26%), Positives = 303/623 (48%), Gaps = 76/623 (12%)
Query: 21 SSSDIPE-IVVQVLDLK-------LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQN 72
SS D P+ + Q+L LK + +RY SDG++ A+L + L+ +V G +
Sbjct: 14 SSGDTPQKPIFQILGLKKISSTVQSSTDRYRLLLSDGQRSHSAMLATQLNKKVTDGELSV 73
Query: 73 KGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQED--- 129
+ +I+L Y N I +++ +I+ + +++ +++ KI G P Q++
Sbjct: 74 RSVIQLNKYICNTI-ADNKRVIIILEVNLIAGQNQVQDKIG-NPVPIGQPAPPAQQNGQA 131
Query: 130 -EVKKDGPGIVL--KPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGN 186
+ G G ++ +P M +A ++ + P +V P+ SL PYQ
Sbjct: 132 PHNAQTGRGGLMSSRPTTTMPYNAANEMPK------MPTTPSGGMSKVFPIASLTPYQNR 185
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
WTI+ RVT+KGN+R + N+RGEGC+F+++L D D +I+AT FN+ +K++D Q+G+VY
Sbjct: 186 WTIRARVTNKGNIRHWNNSRGEGCLFSMDLID-DSAEIRATAFNDQCKKYFDMVQVGQVY 244
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNFVPIDELGRYVN 305
ISRGTL+ ANKQ+ +++NDYEM+ + VE + E + +P +F+F I +L
Sbjct: 245 LISRGTLKTANKQYTSIKNDYEMSFTSETVVELCNDAEASDVPTVQFDFKQIGQLEDIPK 304
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
T +VD+IGV ++ S +I +S N + KR++ + D++++ VT++LW T++ +
Sbjct: 305 DT-MVDVIGVCKSFSDVSTIVTRSTNRELSKRELHLVDDSEKVVTLTLW---GTDLTRFW 360
Query: 366 LDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKKLKSWYESEGKGTSMA 424
+ D Q + + R V + P WY+ EG ++
Sbjct: 361 IVRTRTFSNCPASWATFHDVQVVCVIYRTREGFVYLRP-----THTIHWYDGEGNCKTIT 415
Query: 425 SI-----GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA 479
SI G G G+ KN +I + K
Sbjct: 416 SISEQRTGGGGGTNWKN---------------------------------FIEVKKQGLG 442
Query: 480 MWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE 537
+AC + CNKKV + Y CE C K + R ++V D W++ F ++
Sbjct: 443 SGEKACPSAECNKKVVENSDGSYRCEKCAKEYPDFKYRMLLVINTVDFGDGQWVTCFQDQ 502
Query: 538 AERIIGC-SADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVR 596
A+ I+G +A+ + LK +++ ++ +E + + LR+ + Q+ YN+E R + +
Sbjct: 503 AQVILGGNTAEHIGSLKDS-NNESEFEAVFQEANFKSYNLRMRIKQETYNDETRLKCSCV 561
Query: 597 AVAPVDFAAESKFLLEEISKKVS 619
P+D+ S+ L++++ +S
Sbjct: 562 EAKPLDYKEHSRRLIQDLKTMIS 584
>gi|328857111|gb|EGG06229.1| hypothetical protein MELLADRAFT_74880 [Melampsora larici-populina
98AG31]
Length = 525
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 287/566 (50%), Gaps = 50/566 (8%)
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + L+ + G +Q +++L Y +N + + + +++ EV+
Sbjct: 1 MLSTQLNHLIDEGMLQRMCIVKLPSYTINMVGER--RVVVLLTVEVID------------ 46
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ-ILRDQNGNMAPAARLAMTRRV 174
I KP+ +E K P I P + MV+ S A+ + N P+ V
Sbjct: 47 ------IAKPEPTNEDTK--PTIT--PSKPMVSNSNAKPSINASNRQGGPS--------V 88
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P++ L+PY W IK RV K +++ + NARGEG +F+V +DE G QI+AT FN+
Sbjct: 89 IPIMGLSPYSNKWRIKARVVQKSDIKHWHNARGEGKLFSVTFSDESG-QIKATGFNDTVD 147
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN- 293
+ Y+R +G V+++SR + +A KQF T+ +DYE+ +EV+E V + IP + N
Sbjct: 148 QLYERLVVGDVFFVSRAKVSLAKKQFNTLPHDYEIMFENQTEVDECV-DAGDIPLIQLNK 206
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
++ + +LG V + DI+ V+++ I K + KRDIT+ D++ ++ ++L
Sbjct: 207 YMQLGQLGE-VEKDHVCDIVAVLKDAGELGQIVTKQTQREMSKRDITLVDQSAFSIRMTL 265
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W + A + NA I+A + ++VGDFQG +LS + S + ++P++PEA L+ W
Sbjct: 266 WGKQAEDF------NAPVESILAFQGVRVGDFQGRNLSMVSSSIMAINPEIPEAFDLRGW 319
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYIS 472
Y++EG ++ S SG GS+ N + D + LG EK +F+++A +
Sbjct: 320 YDTEGATVAIQS-HSGAGSVGMNNQAPITEDSLKTIVQVKQEELGQSEKGDYFNLRATVL 378
Query: 473 LIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
IK ++ Y AC T CNKK+ + CE C K RY++ D SG +
Sbjct: 379 FIK-NETFSYPACPTERCNKKMVQDGDDEWKCEKCDKTYPAPDHRYLIQLTASDYSGVMY 437
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+S FNE + ++G +A+EL +L+ + D+ +++ + + T+ ++ Y + R
Sbjct: 438 LSGFNEVGQILLGKTANELIQLQQE--DEENFKRAILDATYRTWDFVCRAKREVYQDTPR 495
Query: 591 QRVTVRAVAPVDFAAESKFLLEEISK 616
+ ++ + V++ L + I+K
Sbjct: 496 TKYSIIRLGEVNWKEAGLGLADLITK 521
>gi|258568498|ref|XP_002584993.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906439|gb|EEP80840.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 561
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 219/404 (54%), Gaps = 20/404 (4%)
Query: 156 RDQNGNMAPAARLAMTR-RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNV 214
R QN A +A ++P+ +L+PY WTIK R T+K ++T+ N GEG +FNV
Sbjct: 107 RQQNHQRASVPTMAPAHANIYPIEALSPYSHKWTIKARCTNKSAIKTWHNRNGEGRLFNV 166
Query: 215 ELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNE 273
L D+ G +I+AT F E Y F+ G VYYIS +++A + F V NDYE+ +
Sbjct: 167 NLLDDSG-EIRATAFKEQCDLLYPLFEEGSVYYISSPCRVQMAKRGFSNVNNDYELTFEK 225
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
++ +E+A N +PQ +FNF I L GT +D +GV+++V + K+ +
Sbjct: 226 DTVIEKAENNDD-VPQMRFNFTNIGGLQSVEKGT-TIDFLGVLKSVDQVTEVPSKATGKR 283
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL 393
KR++T+ D+T +V +++W +A N + D+ ++A K +KV DF G SLS L
Sbjct: 284 YTKRELTLVDDTGFSVRLTIWGNMA-NTFDVMPDS-----VIAFKGVKVSDFGGRSLSLL 337
Query: 394 GRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS 453
T+ PD+ EA KLK WY+++GK + G+R D
Sbjct: 338 SSGTITADPDIEEAHKLKGWYDAQGKFDQFTFHAFSENATGATGSR---QDPPKTIVEVR 394
Query: 454 NPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKND 509
+ LG EKP +F+++A + IK D + Y AC + CNKKV L SG W CE C+K+
Sbjct: 395 DEQLGMSEKPDYFALRATVVFIKQDN-ICYPACVQERCNKKVIQ-LDSGEWLCEHCEKST 452
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
+ RYI+ A + D +G+ W++ F+E ++G +A+ L E+K
Sbjct: 453 PQPEYRYILSANLSDHTGQLWVNCFDEVGRSLMGITANSLMEMK 496
>gi|19074669|ref|NP_586175.1| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 623
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 172/580 (29%), Positives = 281/580 (48%), Gaps = 55/580 (9%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY N SDG +K I S L+ G + LIR +++ Y+ + + +
Sbjct: 94 RYRVNLSDGVNYMKGIFSSELTPHFEKGLVSRYSLIRPGRFSVRS--KDGSVYIYIQEIQ 151
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNG 160
+EI V F Q + V + ++ + ++ RD
Sbjct: 152 AYEDC-NVEIGKPVNISTGNASFSDNQASPGNQRHTNGVNQHRRAPDEEDKKRVKRDAED 210
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
A + LNP+ W IK RV K ++R + N +GEG VFN E++D
Sbjct: 211 EGEFTA----------INMLNPFHNKWAIKGRVVMKSDIRRFTNQKGEGKVFNFEVSD-- 258
Query: 221 GT-QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
GT Q++ F++ F+ ++GKVY I++GT+++ANKQ+ T DYE+ L+++SEV
Sbjct: 259 GTAQVKIICFSDCVDIFFPIVEVGKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHR 318
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNV-SPTMSIRRKSNNEMVPKRD 338
A ++ + P+ FNFV I +L G D IGVV+ V +P+ + R + +E++ KRD
Sbjct: 319 AADDGS--PKYFFNFVKISDL---TLGNAYCDTIGVVKEVYAPSTVMVRSTQSELL-KRD 372
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+ D+ +V ++LW A EL + ++A+KS+KV +F GIS+ST G S V
Sbjct: 373 AVLVDDGG-SVRLTLWGPKA-----EL--EIESGMVLALKSIKVSEFNGISISTTGGSQV 424
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
+ +PD+ EA +L+ WY+S GK + +L + + V + +T
Sbjct: 425 VTNPDIAEAHELEGWYQSIGKDMQV--------TLPRREEKRRLIQEVKESDLT------ 470
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRY 516
+ +++ + +K D +WY +CK CNKKV G Y CE C E+C RY
Sbjct: 471 -----YSTVQGTVMFLKED-GLWYTSCKGEGCNKKVVMEDGGCYRCERCNMTYEDCDYRY 524
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
++ + D SG+ W+S+F+E A G SA E+ + + + Q ++ + + L
Sbjct: 525 MVTMHLGDFSGQMWVSLFDEVATSFFGISAREMKVMSEEAPGE--LQALIRRMYFRECLF 582
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ Q YN+E R R + +V +D ESK LL I K
Sbjct: 583 RIKSKQDSYNDEIRMRYSGLSVENLDILKESKRLLGVIEK 622
>gi|392512868|emb|CAD25779.2| DNA REPLICATION FACTOR A PROTEIN 1 [Encephalitozoon cuniculi GB-M1]
Length = 572
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 237/441 (53%), Gaps = 42/441 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT-QIQATMFNEAARKFYD 238
LNP+ W IK RV K ++R + N +GEG VFN E++D GT Q++ F++ F+
Sbjct: 169 LNPFHNKWAIKGRVVMKSDIRRFTNQKGEGKVFNFEVSD--GTAQVKIICFSDCVDIFFP 226
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
++GKVY I++GT+++ANKQ+ T DYE+ L+++SEV A ++ + P+ FNFV I
Sbjct: 227 IVEVGKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHRAADDGS--PKYFFNFVKIS 284
Query: 299 ELGRYVNGTELVDIIGVVQNV-SPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
+L G D IGVV+ V +P+ + R + +E++ KRD + D+ +V ++LW
Sbjct: 285 DL---TLGNAYCDTIGVVKEVYAPSTVMVRSTQSELL-KRDAVLVDDGG-SVRLTLWGPK 339
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
A EL + ++A+KS+KV +F GIS+ST G S V+ +PD+ EA +L+ WY+S
Sbjct: 340 A-----EL--EIESGMVLALKSIKVSEFNGISISTTGGSQVVTNPDIAEAHELEGWYQSI 392
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
GK + +L + + V + +T + +++ + +K D
Sbjct: 393 GKDMQV--------TLPRREEKRRLIQEVKESDLT-----------YSTVQGTVMFLKED 433
Query: 478 QAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
+WY +CK CNKKV G Y CE C E+C RY++ + D SG+ W+S+F+
Sbjct: 434 -GLWYTSCKGEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFSGQMWVSLFD 492
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E A G SA E+ + + Q ++ + + L R+ Q YN+E R R +
Sbjct: 493 EVATSFFGISAREMKVMSEEA--PGELQALIRRMYFRECLFRIKSKQDSYNDEIRMRYSG 550
Query: 596 RAVAPVDFAAESKFLLEEISK 616
+V +D ESK LL I K
Sbjct: 551 LSVENLDILKESKRLLGVIEK 571
>gi|449329996|gb|AGE96262.1| DNA replication factor a protein 1 [Encephalitozoon cuniculi]
Length = 623
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 237/441 (53%), Gaps = 42/441 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT-QIQATMFNEAARKFYD 238
LNP+ W IK RV K ++R + N +GEG VFN E++D GT Q++ F++ F+
Sbjct: 220 LNPFHNKWAIKGRVVMKSDIRRFTNQKGEGKVFNFEVSD--GTAQVKIICFSDCVDIFFP 277
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
++GKVY I++GT+++ANKQ+ T DYE+ L+++SEV A ++ + P+ FNFV I
Sbjct: 278 IVEVGKVYTIAKGTVKMANKQYSTNPFDYEIILDKSSEVHRAADDGS--PKYFFNFVKIS 335
Query: 299 ELGRYVNGTELVDIIGVVQNV-SPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
+L G D IGVV+ V +P+ + R + +E++ KRD + D+ +V ++LW
Sbjct: 336 DL---TLGNAYCDTIGVVKEVYAPSTVMVRSTQSELL-KRDAVLVDDGG-SVRLTLWGPK 390
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
A EL + ++A+KS+KV +F GIS+ST G S V+ +PD+ EA +L WY+S
Sbjct: 391 A-----EL--EIESGMVLALKSIKVSEFNGISISTTGGSQVVTNPDIAEAHELAGWYQSI 443
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
GK + +L + + V + +T + +++ + +K D
Sbjct: 444 GKDMQV--------TLPRREEKRRLIQEVKESDLT-----------YSTVQGTVMFLKED 484
Query: 478 QAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
+WY +CK CNKKV G Y CE C E+C RY++ + D SG+ W+S+F+
Sbjct: 485 -GLWYTSCKGEGCNKKVVMEDGGCYRCERCNMTYEDCDYRYMVTMHLGDFSGQMWVSLFD 543
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E A G SA E+ + + + Q ++ + + L R+ Q YN+E R R +
Sbjct: 544 EVATSFFGISAREMKVMSEEAPGE--LQALIRRMYFRECLFRIKSKQDSYNDEIRMRYSG 601
Query: 596 RAVAPVDFAAESKFLLEEISK 616
+V +D ESK LL I K
Sbjct: 602 LSVENLDILKESKRLLGVIEK 622
>gi|384246948|gb|EIE20436.1| replication factor-a protein [Coccomyxa subellipsoidea C-169]
Length = 630
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 185/626 (29%), Positives = 310/626 (49%), Gaps = 65/626 (10%)
Query: 20 DSSSDIPEIVVQVLDLKLTGN------RYMFNASDGKKRLKAILPSNLSSEVISGNIQNK 73
D + DI + VVQ++ +K N R+ SDG+ + AI + L V + +
Sbjct: 18 DGAQDI-KAVVQIIGVKPVPNKGDGKQRHRLALSDGQHWITAIPATQLDDLVTNQVVVVG 76
Query: 74 GLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDES--GIIFKPKQEDEV 131
+IRL +Y N + + + LI+ + + + + +M EV ++ G P
Sbjct: 77 SVIRLEEYLFNNV--NNRQVLILLQLDNLGISDKMADATEVGKGQNSGGNAGGPAPLLGG 134
Query: 132 KKDGPGIVLKPKQ------EMVAKSAAQILRD---------QNGNM---APAARLAMTRR 173
GP + + +M A +A QNGN P AR R
Sbjct: 135 AGSGPYAAINGEDAPLYEADMTACAAGGYGGGGGGGGGGYGQNGNYKGHGPIARNEAPPR 194
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNA------RGEGCVFNVELTDEDGTQIQAT 227
+ P+ SLN YQ +WTIK R+T+K +R Y NA G +F+ EL D G +I+
Sbjct: 195 IVPISSLNSYQSHWTIKARITNKSEIRRYSNAPKCAWCMHAGKLFSFELLDAQGGEIRGC 254
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQ----FKTVQNDYEMNLNENSEVEEAVNE 283
FN+ KF Q G V +S+ +L+ NK+ F ++DYE+ L N+ +E +
Sbjct: 255 GFNQCVDKFEPIMQQGAVIMMSKASLK--NKKPGSAFNNTRHDYEITLEPNTVIEVCEED 312
Query: 284 TAFIPQTKFNFVPIDELG-RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
IP+ +++F+ + EL ++ N E VDIIG+V V P+ I+ + E++ KR+I++
Sbjct: 313 ERAIPKMQYHFIKVKELNDKFAN--ETVDIIGIVDKVDPSAVIQTREGKELM-KRNISIR 369
Query: 343 DETKRTVTVSLWNELATNVGQELLD--NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
D++ +V ++LW ++ G +L + N ++A+K+ K+GD+ G +LST+ +T+ V
Sbjct: 370 DDSGASVEITLWGTYSSEPGDQLEEVFNGGVHSVLALKNAKIGDYNGRTLSTVSTTTLTV 429
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSD-RVSLTHITSNPSLGD 459
PD+PEA L+ W++S G A+ S L S + D RV+L I +
Sbjct: 430 DPDVPEAGHLRHWFDSAG---GAAAPVSALTSGSGASVGGGKGDRRVTLATIKEEALGTN 486
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSG----YWCEGCQKND 509
+ I I+ +K D + Y AC K CNKKVTD+ G +WCE C
Sbjct: 487 STNAWVQIVCTITFVKSD-PIAYPACTLQYNGKQCNKKVTDSGGGDGPNRWWCERCSAAC 545
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
E RY++ + D SG+ W++ F EE ++IIG +A+E+ ELK + ++ +L +V
Sbjct: 546 -EAEYRYMLNLNIEDHSGKEWVTAFQEEGKQIIGYTANEMQELKE--AESPLFEARLNDV 602
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTV 595
+L ++ V++ + +E+R R+ V
Sbjct: 603 KCRSYLFKLKVSEDTWQDEQRIRINV 628
>gi|403361002|gb|EJY80197.1| Replication factor-A protein [Oxytricha trifallax]
Length = 701
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 244/466 (52%), Gaps = 42/466 (9%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ SLN + +W IK RVT K +++T+KNA+ EG V NVEL D GT I AT +N+AA K
Sbjct: 240 PIKSLNAFLFDWKIKARVTKKCDLKTWKNAKSEGHVMNVELIDNLGTLILATFYNDAALK 299
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+ + Q VY +S G++++ANK+F +++NDY + +++S+++E V + + I Q FNFV
Sbjct: 300 YNEMLQENHVYLMSNGSVKIANKKFTSIKNDYCIVFDKSSDIKE-VEDDSNIQQQGFNFV 358
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
IDE+ + + VD +GV+ V S + K+ KR + +ADE+ ++++LW
Sbjct: 359 TIDEINDF-EQSRTVDTVGVITQVGQLSSFQPKNGGAAKDKRSLQIADESGLAISMTLWG 417
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISL-STLGRSTVLVSPDLPEAKKLKSWY 414
+ A+ + + ++AI+ KV D+ G +L S S + + D ++LK W
Sbjct: 418 QNASKL------EFKEGSVLAIRGAKVSDYGGKTLNSGHEHSQIFIDVDHKRTRELKQWN 471
Query: 415 ESEGKG--TSMASIGSGLGS--------------LAKNGARSMYSDRVSLTHITSNPSLG 458
+ + S+++IG G+ + KN + S + + + + P
Sbjct: 472 ANRNQDGLNSVSTIGGAQGNQQSEKLDNFRLISEVVKNVSEEGASHQPTYNSMYAQP--- 528
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIM 518
K FF I ++S + D +Y +C C +KV D L G+ CE C K+ YIM
Sbjct: 529 --KAKFFKISGFVSHARSDDKYYYLSCPDCRRKVVDEL-EGFRCENCNKSFSRSFPTYIM 585
Query: 519 VARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL---KEVTWVPHL 575
+ D +G+ +I E ++I+G +A+E + K QL +N +MKL +++ + H
Sbjct: 586 TVKFQDATGDMYIQFARELGDQIMGMTAEEFKDAKEQL--ENPEEMKLFLSQQILYKAHS 643
Query: 576 LRVSVAQQEYNN------EKRQRVTVRAVAPVDFAAESKFLLEEIS 615
+ + +Y + ++R + T VAP+ F E+ LL+ +S
Sbjct: 644 VVIKAQNDQYRSSTMMEGDQRIKYTAIKVAPISFKEENNMLLKRLS 689
>gi|351704190|gb|EHB07109.1| Replication protein A 70 kDa DNA-binding subunit [Heterocephalus
glaber]
Length = 514
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 227/435 (52%), Gaps = 60/435 (13%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
WT+ RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVY
Sbjct: 131 WTVCARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVY 189
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
Y S+GTL++ANKQF V+NDYEM N + V ++ +P +F+F I +L
Sbjct: 190 YFSKGTLKIANKQFTAVKNDYEMTFNNETSVVPCEDD-HHLPTVQFDFTGIGDLENKSKD 248
Query: 307 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 366
+ L+DIIG+ ++ I KS+N V KR+I + D + + VT +LW E A
Sbjct: 249 S-LIDIIGICKSYEDATKITVKSSNREVAKRNIYLMDMSGKVVTATLWGEDADKF----- 302
Query: 367 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK---GTSM 423
+ + P++AIK +V DF G +LS L ST++++PD+PEA KL+ W+++EG+ G S+
Sbjct: 303 -DGSRQPVMAIKGARVSDFGGRTLSVLSSSTIIMNPDIPEAYKLRGWFDAEGQALDGVSI 361
Query: 424 ASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYR 483
+ + SG + +++Y + + N GD K +FS A + ++ + M Y+
Sbjct: 362 SDLKSGGLGASNTNWKTLYEVK------SENLGQGD-KADYFSSVATVVYLRKENCM-YQ 413
Query: 484 ACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERI 541
AC T CNKKV D Y CE C + E + +Y M+
Sbjct: 414 ACPTQDCNKKVIDQQNGLYRCEKCDR--EFPNFKYRMI---------------------- 449
Query: 542 IGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPV 601
L ++ +++ + + + ++ V + YN+E R + TV V PV
Sbjct: 450 --------------LSNEQAFEEVFQNANFRSFMFKIRVKLETYNDESRIKATVMDVKPV 495
Query: 602 DFAAESKFLLEEISK 616
D+ + L+ I +
Sbjct: 496 DYRDYGRRLIMNIRR 510
>gi|167519220|ref|XP_001743950.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777912|gb|EDQ91528.1| predicted protein [Monosiga brevicollis MX1]
Length = 540
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 227/441 (51%), Gaps = 26/441 (5%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R PL SLNPY W I+VRV +K +RTY + RGEG +F+V+L D G +I+AT FN
Sbjct: 124 RAIPLTSLNPYDRRWAIRVRVVAKPPIRTYNSDRGEGKIFSVDLVDASG-EIRATGFNAD 182
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
+ Y F+ KVY I G ++ N++F + ++YE+ + + V E+ + A+ ++
Sbjct: 183 CDRLYPLFEKNKVYMIQGGRIKPKNRRFNQLSHEYEITFDSTTTVTESKDMGAYNFKS-- 240
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F ++ + + DI+ V++ V+ +I ++ + + KR++T+ D+ +++ +
Sbjct: 241 -FAELEAMPITRDTMAFADILAVIKEVADVTTIVTRAAQKELSKREVTLVDKDNVSLSCT 299
Query: 353 LWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
LW + A E +A P ++AIK+ ++ DF G SLS S ++PDL EA +L
Sbjct: 300 LWGKEA-----EGFVDAGGHPGVVMAIKAARISDFNGRSLSVASNSNYSINPDLKEAHEL 354
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
K W S +G K AR + H+T+ L D+K V F +
Sbjct: 355 KGWCVLIFGSRSRVCMG-----FDKWNARQFW-------HLTATVGLPDDKSVAFQVTGT 402
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
I +K D ++Y+AC TCNKKV + Y C+ C K+ +E R + + D SG W
Sbjct: 403 ILYVKSDN-IYYQACPTCNKKVVEESDGSYECQKCAKSYKEFKYRLLTSFSIGDFSGSQW 461
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+ F+E AE ++G SADE+ + D + L + T+ R YN++ R
Sbjct: 462 LQSFSEVAESVLGHSADEIGSWSAN--SDPRFTTALADATFKTWTFRCRARTDTYNDQSR 519
Query: 591 QRVTVRAVAPVDFAAESKFLL 611
RV+V + P+D+ +SK ++
Sbjct: 520 LRVSVASAVPIDYVQDSKRMV 540
>gi|296084703|emb|CBI25845.3| unnamed protein product [Vitis vinifera]
Length = 131
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 114/131 (87%)
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWY 482
MASIGS + +K G RSMY DRVSL+H+TSNP LG++KP FFSI+AYIS IKPDQ MWY
Sbjct: 1 MASIGSDISPSSKGGVRSMYYDRVSLSHVTSNPYLGEDKPSFFSIRAYISFIKPDQTMWY 60
Query: 483 RACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
RACKTCNKKVT A+GSGYWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FNE+AERI
Sbjct: 61 RACKTCNKKVTGAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSMFNEQAERIF 120
Query: 543 GCSADELNELK 553
GCSADE ++LK
Sbjct: 121 GCSADEPDKLK 131
>gi|397580873|gb|EJK51733.1| hypothetical protein THAOC_29071 [Thalassiosira oceanica]
Length = 438
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 237/446 (53%), Gaps = 24/446 (5%)
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y W I+ +V SK +RT+ NA+GEG +F++E+ D GT ++ T F EA KFY+ +
Sbjct: 2 YSNRWVIRAKVVSKSGVRTWSNAKGEGQLFSMEILDSAGTDVKCTFFKEAVDKFYNFIEE 61
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
+VY S G L+VAN Q+ ++ +E+ ++NS +E I + ++FV + ++ R
Sbjct: 62 DRVYTFSGGRLKVANMQYNKCKSQFEITFDQNSTIELDQGGGDDI-RASYDFVKVADVER 120
Query: 303 YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
+ +DI+GVV+ V +I K + + + K ++TV D++ +T+++W + A N
Sbjct: 121 -SQPNDYIDILGVVKAVGEPATIVSKKSGKELTKCELTVEDDSGAEITLTMWGDTA-NKA 178
Query: 363 QELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
+E +P+VA K +V D+ G +LS G S V+P++P+A L W+ + G ++
Sbjct: 179 RERFGG---TPVVAFKRARVSDYGGRTLSGSGFS---VNPNIPQAAALSQWWAANGGKSA 232
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP----DQ 478
S+ S G + N + R ++ I S+ +EKP + S KA I+ +K D+
Sbjct: 233 SRSLSS--GGMGGNRGPDPFEMRKAVNSIKSDQLGYNEKPDYLSFKATITFLKKDKQGDE 290
Query: 479 AMWYRACKT----CNK--KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
WY AC C K T + C+ CQ+ +C R+I V D + +WIS
Sbjct: 291 GAWYTACANGGDPCKNMYKATQTSDGNWHCDKCQQTLPDCVRRFIFSGTVADDTSTSWIS 350
Query: 533 IFNEEAERII-GCSADELNE--LKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
+FN++AE ++ G +AD+L + G + Y T+ + + V Q+ +E+
Sbjct: 351 VFNQQAEELLGGATADDLYDKITSGDGGGRDVYDSAFARATYSEWIFKCKVRQEMVGDEQ 410
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEIS 615
R + ++ A P+D+AAES+ LL+ ++
Sbjct: 411 RIKTSLVAAHPLDYAAESRSLLQALA 436
>gi|428164777|gb|EKX33791.1| replication protein A1, 70kDa [Guillardia theta CCMP2712]
Length = 702
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 221/415 (53%), Gaps = 24/415 (5%)
Query: 206 RGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQN 265
+GEG +FN+++ D G I+ T FN+ A K++ Q KVY I GT++ AN++F T +
Sbjct: 304 KGEGRLFNIDIMDHTG-DIRGTFFNDDADKWFPHLQANKVYKIRGGTIKQANRKFNTTSS 362
Query: 266 DYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSI 325
+YE+ N +S + + A P+ +NF I+E+ +VD++ VV +V P S+
Sbjct: 363 EYEITFNRDSTFDIVADSEA--PKVSYNFRKIEEI-ENTEPQSIVDVLAVVHDVQPLGSV 419
Query: 326 RRKSNNE---MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKV 382
KS + + KRD+++ D +T+ ++LW++ V + + N P++AIK ++V
Sbjct: 420 TVKSGSNAGNQIAKRDVSLLDTGGKTIKLTLWDDHKDVVTENDMSN----PVIAIKGVRV 475
Query: 383 GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMY 442
DF G SLST S + ++PDL EA LK WY+ GK ++G + S +K+
Sbjct: 476 SDFNGRSLSTTRSSMIEMNPDLQEAHLLKGWYDCHGKSAVFQAVGGSMSSGSKD------ 529
Query: 443 SDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC 502
R +++ I EKP +F+++A+++ K D Y A KKV A G ++
Sbjct: 530 -SRKTISQIKGENLGNAEKPDYFTLRAWVTYFKHDGTWNYPANPETKKKVI-AHGDSWFD 587
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSY 562
E Q+ E C RY+M D +G W S FN++ ++G +ADEL ELK + D Y
Sbjct: 588 ESTQQTIERCERRYVMNLSCSDFTGSHWFSAFNDQGIALLGKTADELQELKDSMNPD--Y 645
Query: 563 QMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDF---AAESKFLLEEI 614
+ + + P++L+V + + +E R + T+ V PVD+ A E + L+ +
Sbjct: 646 EATWQASVFKPYVLKVRAKAETWQDETRVKCTIMEVKPVDWREGATEIRNLIRDF 700
>gi|242086611|ref|XP_002439138.1| hypothetical protein SORBIDRAFT_09g001240 [Sorghum bicolor]
gi|241944423|gb|EES17568.1| hypothetical protein SORBIDRAFT_09g001240 [Sorghum bicolor]
Length = 878
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 165/607 (27%), Positives = 305/607 (50%), Gaps = 89/607 (14%)
Query: 47 SDGKKRLKAILPS---NLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVS 103
+DG LK +L +++ V+ G+I+ +I L ++ N I ++ + +IVTK
Sbjct: 273 ADGNGTLKPMLQVVDVRMNTCVLDGSIRKGSIIHLQEFTCNTI--QNRRLIIVTK----- 325
Query: 104 PALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMA 163
+ V E I+ PK ++ P +Q N+
Sbjct: 326 --------LYVLQSECNIMGNPKPYK--MRNQPN-------------------EQVTNLP 356
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
P A + P+ +LNPY+ W I RVT+K ++R Y ++RG G VF+ +L D G +
Sbjct: 357 PNAENKSPFCITPVSALNPYETRWKIMARVTAKTDLRHYSSSRGPGKVFSFDLLDGQGGE 416
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+AT FN A +F+D ++ KVY IS G+++ A K + ++ ++YE+ L+ + +E V++
Sbjct: 417 IRATCFNAQADQFFDLIEVDKVYLISNGSVKPALKNYNSLNHEYEITLDNKTSIEVCVDD 476
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
+ IP+ ++NF I E+ G +VD+IG+V +V P+ + RK + KR + + D
Sbjct: 477 DSNIPRQEYNFRQISEIENIEAGV-IVDLIGIVTSVGPSAIVMRKDGTQ-AQKRTLQLKD 534
Query: 344 ETKRTVTVSLWNELATNVGQ--ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS 401
+ R++ + LW + G +LL ++ +PI+++KS +V DF G S+ T+ + + V+
Sbjct: 535 MSVRSMEIILWGKFCDAEGHQLQLLCDSGSNPILSLKSGRVCDFSGRSVVTISSTQLKVN 594
Query: 402 PDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG-DE 460
PD P AK+LK WY +EGK T+ S+ G+ ++++N + + +LG +
Sbjct: 595 PDFPVAKRLKQWYVTEGKNTACISLSQGISNMSRNHVLKTIAQ-------IKDENLGRSD 647
Query: 461 KPVFFSIKAYISLIKPDQAMWYRAC----------------KTCNKK-------VTDALG 497
KP F +++A +S + D Y+AC K C KK V DA+
Sbjct: 648 KPDFITVRAVLSHVGADN-FCYQACTLELNGKRCCSFEFNGKRCYKKLVRKPITVIDAIR 706
Query: 498 SGYWCEGCQKNDEECSLRYI---MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS 554
+ D +L+ + +V + D +G + + F E E I G +A EL +++
Sbjct: 707 ALK-----TVIDAIRALKTVIDGIVIDIKDHTGTTYATAFQEAGEVIFGHTAQELFMIRN 761
Query: 555 -QLGDDNSYQMK--LKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLL 611
+ G++ + ++ + W +L ++ V ++ YN E+R + T+ V ++ E+ LL
Sbjct: 762 VEQGEERFKEFTEIMQAIIWREYLFKLKVDEKTYNGEQRVKCTIIGVEKLE---ETNNLL 818
Query: 612 EEISKKV 618
+++S+ +
Sbjct: 819 KDVSRPI 825
>gi|300708826|ref|XP_002996585.1| hypothetical protein NCER_100307 [Nosema ceranae BRL01]
gi|239605898|gb|EEQ82914.1| hypothetical protein NCER_100307 [Nosema ceranae BRL01]
Length = 573
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 280/574 (48%), Gaps = 66/574 (11%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY SDG ++A+ S L+ + + I+ L++L + I + Y I +
Sbjct: 46 RYRAYLSDGLHYIRAVFGSELTPLLETNQIEKYSLVKLDSFIFRLIKGNAYIY-IYSLAG 104
Query: 101 VVSPALEMEIKIEVKSDESGIIFKPKQ---EDEVKKDGPGIVLKPKQEMVAKSAAQILRD 157
+ +E+ + SD S KQ EDE PK+ VAKS
Sbjct: 105 YENCNVEIGNPTPIYSDGSNRTDTNKQKVNEDET----------PKKSKVAKSV------ 148
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT 217
+N + + S+NP+ W IK R+ K ++R + N +GEG +F+ E+
Sbjct: 149 ENKQTEDPNKYTQ------INSINPFCNKWIIKGRIVLKSDIRKFSNKKGEGKLFSFEIA 202
Query: 218 DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV 277
D+ G QI+ F+E+ FY ++G+VY I +G ++++ K F NDYE+ L+ NSE+
Sbjct: 203 DDSG-QIKVVAFSESVDIFYPIIEIGRVYTIQKGEIKMSKKTFSNNNNDYEIQLDVNSEI 261
Query: 278 EEAV-NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
++ NET P+ FNFV I ++ + +DI+G+V+ +S K+ + +
Sbjct: 262 KKVEDNET---PKFFFNFVKIKDI---TSSNAPIDIVGIVKEAGEAVSFIVKATQKESLR 315
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
R+IT+ DET ++ + W G + + + ++AIKS+KV DF G+SLS++ S
Sbjct: 316 RNITLIDETG-SIRATFW-------GAKAEEEIEVDSVLAIKSIKVSDFGGVSLSSIHTS 367
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
+ +PD+ E+ L WY +EGK + L I +
Sbjct: 368 QIHKNPDISESHSLLGWYNTEGKNVKIDLPERDL-------------------KIFNISD 408
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRACK--TCNKKVTDALGSGYWCEGCQKNDEECSL 514
+ +++ + +++A + IK D M Y +CK C KKV Y CE C KN EC+
Sbjct: 409 VKNQEMPYSAVRATLMFIKEDNLM-YDSCKEENCTKKVYKNEFGEYRCEKCDKNSYECTH 467
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPH 574
RY++ A + D +G+ W ++FN++A ++G SA + E+ D N QM +K+ + +
Sbjct: 468 RYLIHANISDSTGQLWATLFNDQAILLLGMSASDFREMAD--NDPNQSQMFIKKFLYREY 525
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
++++ Q YN+E + R + + V++ E+K
Sbjct: 526 IIKLRSRQDNYNDEIKMRHNISEIREVNYKEETK 559
>gi|294949396|ref|XP_002786176.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900333|gb|EER17972.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 479
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 253/470 (53%), Gaps = 46/470 (9%)
Query: 176 PLVSLNPYQ-GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P+ ++ Y NWTIK RVT+K +R + NARG G VF+V+L D++G++I+ + FN AA
Sbjct: 6 PIREISSYSVRNWTIKARVTAKSPVRHFTNARGGGSVFSVDLLDKEGSEIRGSFFNAAAE 65
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET-AFIPQTKFN 293
KF Q GKVY S+G ++VANK++ + ++YE+ E+S++ E ++ I + K++
Sbjct: 66 KFDKLLQKGKVYTFSKGNVKVANKRYSSCNHNYEIVFEEDSQIVEVQDDVDDHIDKIKYS 125
Query: 294 FVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F P+ EL + V T VD++ V+++ P ++ K+ E+ +R++TV DE+ V V+
Sbjct: 126 FCPVRELKSKSVPST--VDLLVVIKDHRPAGTVNSKNGAELF-RRNLTVCDESGCCVDVT 182
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
WN+L V + +L P+VA+K + V D+ G S STL + + V+PD+PEAK+LK
Sbjct: 183 FWNDLVNVVDESVLQT---QPVVAMKGVSVRDYGGRSCSTLNSTQIEVNPDIPEAKQLKI 239
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI---TSNPSLGDEKPVFFSIKA 469
W+ + G + ++ S+ +G ++M + +++ + N LG + I
Sbjct: 240 WWANTGCSMAFTNLSQQGTSVPGSGGQTMVTKEMTIAEMKNDVKNMDLGGSMHS-YEIIG 298
Query: 470 YISLIKP------DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
+ + D ++Y AC++CN+K+ A GS +C+ C + RY++ ++
Sbjct: 299 RLQFVTTRGRDGNDIPIFYMACESCNRKM--AEGSDGFCQACNRQ-VNVKARYMLRSQFV 355
Query: 524 DGSGEAWISIFNEEAERIIGCSADEL-----------NELKSQLGDDNSYQMKLKEVTWV 572
D + +A+++ F+++A +IG ++ NELK D KE W
Sbjct: 356 DSTDDAYLTCFHDQAHTLIGRPVEDFVMAQDVGKSAGNELKEHYYD--------KE--W- 404
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQN 622
+RV + Y E R R+TV ++ P+D + LL I + + ++
Sbjct: 405 --KIRVRAKMETYQGEPRPRITVSSLEPMDPKEHCRRLLAAIHENIGKED 452
>gi|154295413|ref|XP_001548142.1| hypothetical protein BC1G_13185 [Botryotinia fuckeliana B05.10]
Length = 595
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 176/588 (29%), Positives = 284/588 (48%), Gaps = 62/588 (10%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLI----- 95
R+ SD + ++ +L + + + G + IRL +Y NE+ K ++
Sbjct: 50 RFRLVVSDIQNFVQCMLATQANHVIHDGKLTKGCFIRLKNYQANEVKGKRILIILDIDVI 109
Query: 96 --VTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ 153
+ E + ++++ +VK + I G G Q + +
Sbjct: 110 ESLGTMEKIGEPTAVKVEEDVKPTNTSIA------------GSGFYGNKPQPQQPAAQDR 157
Query: 154 ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
L +NG + ++ ++P+ SL+PY WTIK RVTSK ++RT+ EG +F+
Sbjct: 158 ALPSRNGPSSSSSHAT----IYPIESLSPYAHKWTIKARVTSKSDIRTWSKPNSEGKLFS 213
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI-SRGTLRVANKQFKTVQNDYEMNLN 272
V L DE G +I+AT FNE Y+ FQ G VYYI S +++A KQF + NDYE+
Sbjct: 214 VNLLDESG-EIKATGFNEQCDALYETFQEGSVYYITSPCRVQIAKKQFSNINNDYELMFE 272
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
++ VE+A ++ +PQ ++NF I +L + + VD+I V++ V I K+ ++
Sbjct: 273 RDTLVEKAEDQDN-VPQVRYNFSNIGDL-QSIEKDSTVDLIAVLKEVGEISEITSKTTSK 330
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISL 390
KR++T+ DET +V +++W + AT+ D SP +VA K +KV DF G SL
Sbjct: 331 PYSKRELTLVDETGYSVRLTIWGKTATSF--------DASPESVVAFKGVKVSDFGGRSL 382
Query: 391 STLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH 450
S L ++ PD+ EA KLK G ++AS G+ G D +
Sbjct: 383 SLLSSGSMSFDPDIQEAHKLK--------GCNLASAGAAGGR----------QDPIKTIA 424
Query: 451 ITSNPSLG--DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQ 506
+ LG +E +FS +A I IK D Y AC + CNKKV D + CE C
Sbjct: 425 QVKDEGLGMSEENTDYFSSRATIVYIKQDN-FCYPACLNENCNKKVVDQNDGTWRCEKCN 483
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL 566
++ + RYI+ V D +G+ W++ F+E I+G SADEL ELK D + +
Sbjct: 484 QSHPKPEYRYILALNVNDHTGQMWLTAFDEVGRLIMGKSADELMELKE--NDPPAMERVF 541
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ +V Y ++ R R +V + V++AA++ L E I
Sbjct: 542 EDANCKMMTFKVRCKTDTYQDQARVRYSVMSALAVNYAADALKLAELI 589
>gi|414589167|tpg|DAA39738.1| TPA: hypothetical protein ZEAMMB73_875706 [Zea mays]
Length = 487
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 145/249 (58%), Gaps = 61/249 (24%)
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
N+LAT GQELLD D SPIVAIKSLKV DFQG+SL T+GRST+ ++PDL EAK L SWY
Sbjct: 213 NDLATRTGQELLDMVDSSPIVAIKSLKVSDFQGVSLPTIGRSTLEINPDLLEAKNLMSWY 272
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
SEGK S+A I + G+ G + MYSDRV L+HITS+P++G E
Sbjct: 273 VSEGKDISLAPISAEAGATRAGGFKYMYSDRVFLSHITSDPAMGQE-------------- 318
Query: 475 KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
KVT+ GSGYWCEGCQKND ECSL
Sbjct: 319 ----------------KVTEVFGSGYWCEGCQKNDSECSL-------------------- 342
Query: 535 NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
SADEL+ ++ + G DNSY +KLKE TWVPH+ RVSV Q EY NEKRQR+T
Sbjct: 343 ----------SADELDWIRKEEG-DNSYVLKLKEATWVPHMFRVSVTQDEYMNEKRQRIT 391
Query: 595 VRAVAPVDF 603
+ V + F
Sbjct: 392 MDRVLALYF 400
>gi|154340545|ref|XP_001566229.1| putative replication factor A, 51kDa subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063548|emb|CAM39729.1| putative replication factor A, 51kDa subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 467
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 230/425 (54%), Gaps = 24/425 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDDVSSITQKSTGRELVKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A G + +VA++ LKVG F G++LS+ ++ + V+P DLP+
Sbjct: 183 AVEVTFWNDEAQTWGYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDVNPTDLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGS-GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
KKL +WY S G G ++ S+ S GLG++ G + R L I S KP +
Sbjct: 237 VKKLATWYVSTG-GANVTSLSSQGLGAINGAGGENDRG-RKYLDEIQSEGIGRGLKPEYV 294
Query: 466 SIKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVC 523
++ K D A WY AC TCNKKVT+ A G + CE C K RY++ +V
Sbjct: 295 DVRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTPTQ-RYLVSIQVT 352
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQ 582
D +AW+++FNE G A ELK + +D Y KL + P ++R+ V +
Sbjct: 353 DNVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKE 409
Query: 583 QEYNN 587
+ +N
Sbjct: 410 ETSSN 414
>gi|302498152|ref|XP_003011074.1| hypothetical protein ARB_02596 [Arthroderma benhamiae CBS 112371]
gi|291174622|gb|EFE30434.1| hypothetical protein ARB_02596 [Arthroderma benhamiae CBS 112371]
Length = 475
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 232/438 (52%), Gaps = 22/438 (5%)
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
QN + + +A + + +L+P+ N WTIK R T K N++T+KN GEG +F+V L
Sbjct: 55 QNAQRSRPSGMASNANIFSIEALSPFANNKWTIKARCTHKSNIKTWKNTFGEGKLFSVNL 114
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR-GTLRVANKQFKTVQNDYEMNLNENS 275
D+ G +I+AT F + Y F+ G VYYIS T+++A K+F V NDYE+ + ++
Sbjct: 115 LDDSG-EIRATAFKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFDRDT 173
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
VE+A ++ +PQ +FNF + L GT +D++G++++V T + K+ +
Sbjct: 174 VVEKAEDQND-VPQIRFNFTSLGNLQSIDKGT-TIDVLGILKDVDATSQVTSKTTGKPYD 231
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KR++T+ D + +V +++W ATN D +S +VA K +KV DF G +LS L
Sbjct: 232 KRELTLVDNSGFSVRLTVWGNTATN-----FDTPPES-VVAFKGVKVSDFGGRTLSLLSS 285
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
TV V PD+ EA +LK WY+++GK S + S A G + +++ I
Sbjct: 286 GTVTVDPDIEEAHRLKGWYDAQGKSNSF----TAYSSGATGGGGGSWPTFKTISEIRDEE 341
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEEC 512
+ FS+KA + +K + + Y AC + C NKKVT + CE C+++
Sbjct: 342 LPSADSFETFSLKATVIHVKDN--LCYPACPNEACKNKKVTRGDLDQWHCERCERSYANP 399
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWV 572
RYI+ CD +G+ W+S F+E + I G +ADEL ++K + DD + K T+
Sbjct: 400 KYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADELMKIKEE--DDTAANEITKGATYC 457
Query: 573 PHLLRVSVAQQEYNNEKR 590
+ Y ++R
Sbjct: 458 TWNFKCRAKLDTYQEQQR 475
>gi|242019128|ref|XP_002430017.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Pediculus humanus corporis]
gi|212515079|gb|EEB17279.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Pediculus humanus corporis]
Length = 600
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 300/620 (48%), Gaps = 59/620 (9%)
Query: 21 SSSDIPEIVVQVL-DLKLTGN----RYMFNASDGKKRLK-AILPSNLSSEVISGNIQNKG 74
S +I ++QVL KLT N RY SDGK A++ + L+ V SG +
Sbjct: 2 SGGNIDSPIMQVLGSKKLTSNNATERYRLLISDGKYHNSFAMIATQLNDLVSSGELSEFT 61
Query: 75 LIRLLDYALNEIPT-KSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKK 133
++++ Y + T + E+Y I VVS + I +K P+ + + K
Sbjct: 62 IVKIKRYITSLFNTSEKERYCIFN---VVSVSFRY---IGLKDSNEKTEMPPENQPQATK 115
Query: 134 --DGPGIVLKPKQEMVAKSAAQ----------ILRDQNGNMAPAARLAMTRRVHPLVSLN 181
+ K +++ K +L GN T +HP+ SL+
Sbjct: 116 PQANKAALYKVFKKLETKIYINKIVCTNIFIFVLGFSFGNKPKLTAQVSTGTIHPISSLS 175
Query: 182 PYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQ 241
PYQ W IK RVT+K R Y +ARGEG +F+V TDE G +I+ T FN A KF D Q
Sbjct: 176 PYQNRWCIKARVTNKQAPRNYSSARGEGKLFSVVFTDESG-EIKCTGFNSAVDKFSDLLQ 234
Query: 242 LG----KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ K++Y T +N + + L N V+ ++ +P +NFVPI
Sbjct: 235 VSLRKLKLFY----TYLFSN----FLTESFNFYLVSNCSVQPCEDDVG-LPSAVYNFVPI 285
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
+L ++ +VD+IGV ++ + +I +S + KR++ + D + +V+++LW
Sbjct: 286 SKLIE-MSVDSIVDVIGVAKHATDVQNITARSTGRELKKREVVLVDSSGASVSMTLWGSE 344
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A VG + +N P+VA+KS ++ +F G SLS STVL PD+ EA KL+ W+ S
Sbjct: 345 A--VGFDCSEN----PVVAVKSARLTEFMGGKSLSVQMNSTVLRDPDIDEAHKLRGWWAS 398
Query: 417 EGKGTSMASIGS-GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
G +SI + G N ++ D S LGD K +FS + + K
Sbjct: 399 GGSTLECSSISNKGTSGSGSNTNWVLFGDLTS-----QGLGLGD-KADYFSAVVNVLMAK 452
Query: 476 PDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ + Y++C + C KK+ D Y CE C + R ++ A+V D SG +W+++
Sbjct: 453 QENCI-YKSCPVEDCKKKIIDLNNGVYRCEKCNREHNNFKYRMLLSAQVSDYSGSSWVTM 511
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
F+EEA++++G A+ + ++ +D SY+ ++ + ++ + YN+EKR +
Sbjct: 512 FHEEAQKLLGVDAEIIGKMMDN--NDESYKEYFNDINFKQFQMKFRTKMESYNDEKRLKT 569
Query: 594 TVRAVAPVDFAAESKFLLEE 613
TV + P+D+ + ++ LLE+
Sbjct: 570 TVVNLEPIDYKSYARRLLED 589
>gi|449688518|ref|XP_004211765.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Hydra magnipapillata]
Length = 398
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 167/256 (65%), Gaps = 7/256 (2%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
++ V P+ SL PYQ WTI+ R+T+K ++RT+ N+RG+G +F+++L DE G +I+AT FN
Sbjct: 144 SKSVFPISSLTPYQNRWTIRARITNKSSIRTWSNSRGDGKLFSIDLVDESG-EIRATAFN 202
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
E K+YD ++GKVYYI++G+L+ ANKQ+ +++NDYEM LN +S V E N+ +P
Sbjct: 203 EVVDKYYDLLEIGKVYYITKGSLKTANKQYSSLKNDYEMTLNNDSLV-ELCNDLCDLPTL 261
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+FNF I + VN L+DI+G+V++ S I K+ N+ V KRDIT+ D++ V
Sbjct: 262 QFNFKQIKSI-EDVNKDALIDIVGIVKSSSEMQQITSKATNKQVWKRDITIVDQSGSAVQ 320
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
++W A ++ + DK+P+VAIK KV DF G SLS L S ++PD+PEA +L
Sbjct: 321 ATIWGSEA----EKFEEYTDKNPVVAIKGAKVSDFGGRSLSILNSSIFHINPDIPEAYEL 376
Query: 411 KSWYESEGKGTSMASI 426
+ W+++ G SI
Sbjct: 377 RGWFDNGGINEQTTSI 392
>gi|302667076|ref|XP_003025132.1| hypothetical protein TRV_00711 [Trichophyton verrucosum HKI 0517]
gi|291189215|gb|EFE44521.1| hypothetical protein TRV_00711 [Trichophyton verrucosum HKI 0517]
Length = 475
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 232/438 (52%), Gaps = 22/438 (5%)
Query: 158 QNGNMAPAARLAMTRRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
QN + + +A + + +L+P+ N WTIK R T K N++T+KN GEG +F+V L
Sbjct: 55 QNAQRSRPSGMASNANIFSIEALSPFANNRWTIKARCTHKSNIKTWKNTFGEGKLFSVNL 114
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR-GTLRVANKQFKTVQNDYEMNLNENS 275
D+ G +I+AT F + Y F+ G VYYIS T+++A K+F V NDYE+ + ++
Sbjct: 115 LDDSG-EIRATAFKDQCDLLYPIFEEGAVYYISSPCTVKMAKKEFSNVNNDYELTFDRDT 173
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
VE+A ++ +PQ +FNF + L GT +D++G++++V T + K+ +
Sbjct: 174 VVEKAEDQND-VPQIRFNFTSLGNLQSIDKGT-TIDVLGILKDVDATSQVTSKTTGKPYD 231
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR 395
KR++T+ D + +V +++W ATN D +S +VA K +KV DF G +LS L
Sbjct: 232 KRELTLVDNSGFSVRLTVWGNTATN-----FDTPPES-VVAFKGVKVSDFGGRTLSLLSS 285
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
TV V PD+ EA +LK WY+++GK S + S A G + +++ I
Sbjct: 286 GTVTVDPDIEEAHRLKGWYDAQGKSNSF----TAYSSGATGGGSGSWPTFKTISEIRDEE 341
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEEC 512
+ FS+KA + +K + + Y AC + C NKKVT + CE C+++
Sbjct: 342 LPSADSFEAFSLKATVIHVKDN--LCYPACPNEACKNKKVTRGDLDQWHCERCERSYANP 399
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWV 572
RYI+ CD +G+ W+S F+E + I G +ADEL ++K + DD + K T+
Sbjct: 400 KYRYILSLNACDHTGQIWLSCFDEAGQMIFGMTADELMKIKEE--DDAAANEITKGATYC 457
Query: 573 PHLLRVSVAQQEYNNEKR 590
+ Y ++R
Sbjct: 458 TWNFKCRAKLDTYQEQQR 475
>gi|342185999|emb|CCC95484.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 464
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 246/456 (53%), Gaps = 40/456 (8%)
Query: 172 RRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+++ P+ SL P+ G+ W I+ RVT K ++RT+ +G +F+ L DE + I+AT+FN
Sbjct: 7 QQIQPIDSLTPFLGSKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLIDESAS-IRATVFN 65
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQ 289
+A F G+VY+ S G ++ AN++F V NDYE++ + +S++ A + +A IP
Sbjct: 66 DAVDLFNPLIVNGQVYFFSGGQVKNANRKFSNVNNDYELSFDSSSQISIARDASSASIPL 125
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
++NFVPI+ L + G+ LVD++ V+ V +I +KS + KR++ V+D T +
Sbjct: 126 QRYNFVPIEILKQREVGS-LVDVLAVILGVDELTTITQKSTGRDLIKRNVKVSDSTA-AI 183
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
V+LWN+ A + ++AI+ LKVG F G++LS +++ V+P++P+ KK
Sbjct: 184 DVTLWNDDAKQWMHQ------PGTVLAIRQLKVGSFDGVTLSATLQTSFDVNPNIPDVKK 237
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARS--------MYSDRVSLTHITSNPSLGDEK 461
L W+ S G G +AS+ S G+LA GA + Y D V+ + P +
Sbjct: 238 LSEWFISTG-GRGVASL-SAQGTLAGAGAANSGEGYRGYKYFDDVAAEGLGRGP-----R 290
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVT--DALGSGYWCEGCQKNDEECSLRYIMV 519
P + ++ +K D A WY AC CNKKVT ALG Y CE C + RYI+
Sbjct: 291 PDYIDVRCVPVYLKQD-AQWYDACPNCNKKVTLEGALGDRYRCEKCDQTVVPTQ-RYIVS 348
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRV 578
+V D + W+++FNE G A +ELK + +D + K+ ++ P L+R+
Sbjct: 349 IQVTDNVSQVWLTLFNESGIDFFGMPA---SELKKRQEEDAMFVTKVAQMRMNRPVLMRL 405
Query: 579 SVAQQEYN---NEKRQRVTVRAVA---PVDFAAESK 608
V + Y +++R R+TV + P+D E K
Sbjct: 406 RVKDEPYTGGEDQERVRLTVVRMTEFMPLDAVTEEK 441
>gi|323450756|gb|EGB06636.1| hypothetical protein AURANDRAFT_71962 [Aureococcus anophagefferens]
Length = 1589
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 237/439 (53%), Gaps = 22/439 (5%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
LNPYQ +TIK RVT+KG MRT+ G +F+V+L D G +I+ T F E A K +
Sbjct: 911 LNPYQQRFTIKARVTAKGPMRTWNKPTSSGNLFSVDLLDGSG-EIRGTFFKEVADKVFPL 969
Query: 240 FQLGKVYYI--SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ GKVY + G L+ +NKQ+ ++ +++E+ N VE A ++ A I + ++ I
Sbjct: 970 LEEGKVYVFQETSGRLKPSNKQYTSIPHEFEVTFG-NVTVEPADDDGA-IARIVGDWKKI 1027
Query: 298 DELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
E VDI+GV++ P I K + + KR++ + D++ V ++ W E
Sbjct: 1028 SMFADGGGPREGNVDIVGVIKAAFPAGQITSKRTGQELTKREVVLCDDSGYDVRLTFWGE 1087
Query: 357 LATNVGQELLDNA--DKSPIVAIKSLKVGDFQGISLST-LGRSTVLVSPDLPEAKKLKSW 413
LA L D+A + P++A K L+V DF G+SLS+ G + + PE+ +L++W
Sbjct: 1088 LA------LRDDAFFEAQPVLAAKGLRVSDFGGVSLSSGFGSQLIFDGQEDPESLRLRAW 1141
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
+ +EG G ++ G+ +GA + + DR+ L I EKP + + K ++
Sbjct: 1142 W-TEGGGREAPTVAL-TGASGGSGAPAAFGDRIVLDDIKGRQLGFGEKPDYVTFKGTLNF 1199
Query: 474 IKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
+K D+ +WY AC + C KKV + CE CQ + EC RY+M + D S ++W+
Sbjct: 1200 VKTDR-LWYEACAQEGCQKKVVQNSDGTWHCEKCQATNAECKRRYLMSSTFVDDSAQSWV 1258
Query: 532 SIFNEEAERI-IGCSADELNELKSQL-GDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
S FN+ A +I +G +AD+L K ++ +D ++ +K+ + ++++V V + + +
Sbjct: 1259 SAFNDHATKIFLGVNADDLAAYKEEVENEDGKFEDYMKQFLFKQYVVKVRVKSEVWQEQS 1318
Query: 590 RQRVTVRAVAPVDFAAESK 608
R + ++ + +D+ AES+
Sbjct: 1319 RVKASIVDIFDLDYVAESR 1337
>gi|302687831|ref|XP_003033595.1| hypothetical protein SCHCODRAFT_53289 [Schizophyllum commune H4-8]
gi|300107290|gb|EFI98692.1| hypothetical protein SCHCODRAFT_53289, partial [Schizophyllum
commune H4-8]
Length = 432
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 24/440 (5%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ ++ Y NWTIK RV +K +RT+ N RG G +FNV D G +I+AT FN+A +
Sbjct: 1 IATIALYNSNWTIKARVVTKSAIRTWSNNRGSGSLFNVTFLDSTG-EIRATGFNQAVDRL 59
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
YD Q+G+V+++++ + +A ++F V NDYE++L +N+ +E +++ A +P KF+FV
Sbjct: 60 YDVLQVGRVFFVTKARVELAKRKFSNVNNDYELHLEQNTSIEPCLDD-ADVPVIKFDFVK 118
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
ID+L + D+IGVV + S I KS N KR++T+AD++ +V V+LW E
Sbjct: 119 IDQLLTTEKDSS-CDVIGVVVDCSEVSEIATKSTNRAAKKRELTIADDSGYSVRVTLWGE 177
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A + P++A K +KVGDF G SL+ L S + V+ D + +L+ W+++
Sbjct: 178 TAEKYSEA------GYPVIAFKGVKVGDFGGRSLTMLTSSLMYVNLDHADTAELRDWFDN 231
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP 476
GK + S S + + + D+ L+ I E +S++A I IK
Sbjct: 232 TGKHRDFTAHTS---STSSSHYSFDHGDQRDLSQIRDATRGMSETTSNYSVRAMIMDIKA 288
Query: 477 DQAMWYRACKT--CNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ + Y AC++ C+KKV + + G W CE C + RY + + D +G
Sbjct: 289 -KPLAYPACRSPGCSKKVVE-ISDGRWLCEKCNTSHSSPDYRYTLHILIGDATGTMLFQA 346
Query: 534 FNEEAERIIGCSAD---ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
F++ + I+G SA+ + E + G DN+ K TW + R + Y+ E R
Sbjct: 347 FDDVGKVILGMSANAVIAMREANNYQGTDNALSRATKR-TW-NFVCRTR--NEAYDGEPR 402
Query: 591 QRVTVRAVAPVDFAAESKFL 610
R + P+DF E++ L
Sbjct: 403 LRYEITRAEPIDFLEEAQEL 422
>gi|13096131|pdb|1FGU|A Chain A, Ssdna-Binding Domain Of The Large Subunit Of Replication
Protein A
gi|13096132|pdb|1FGU|B Chain B, Ssdna-Binding Domain Of The Large Subunit Of Replication
Protein A
Length = 252
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/254 (42%), Positives = 158/254 (62%), Gaps = 9/254 (3%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE
Sbjct: 3 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQ 61
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P +F
Sbjct: 62 VDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPTVQF 120
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + VT +
Sbjct: 121 DFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTAT 179
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA KL+
Sbjct: 180 LWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRG 233
Query: 413 WYESEGKGTSMASI 426
W+++EG+ SI
Sbjct: 234 WFDAEGQALDGVSI 247
>gi|2624702|pdb|1JMC|A Chain A, Single Stranded Dna-Binding Domain Of Human Replication
Protein A Bound To Single Stranded Dna, Rpa70 Subunit,
Residues 183-420
Length = 246
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 157/251 (62%), Gaps = 9/251 (3%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M +V P+ SL PYQ WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT F
Sbjct: 4 MQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAF 62
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
NE KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V ++ +P
Sbjct: 63 NEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDD-HHLPT 121
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+F+F ID+L + LVDIIG+ ++ I +SNN V KR+I + D + + V
Sbjct: 122 VQFDFTGIDDLENKSKDS-LVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVV 180
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
T +LW E A + + P++AIK +V DF G SLS L ST++ +PD+PEA K
Sbjct: 181 TATLWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYK 234
Query: 410 LKSWYESEGKG 420
L+ W+++EG+
Sbjct: 235 LRGWFDAEGQA 245
>gi|308813768|ref|XP_003084190.1| replication protein, putative (ISS) [Ostreococcus tauri]
gi|116056073|emb|CAL58606.1| replication protein, putative (ISS) [Ostreococcus tauri]
Length = 566
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 176/595 (29%), Positives = 293/595 (49%), Gaps = 72/595 (12%)
Query: 31 QVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKS 90
QVLD K Y +DG+ ++A ++ + +S + ++ +++L D A +
Sbjct: 27 QVLDFKSADAAYSATLNDGENTIEAQFSKSVCATKLS-KVTDRAVLKLTDVAYDGAEGGE 85
Query: 91 EK-YLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAK 149
K + ++ EVV+ + I +E K+ PG + PK E
Sbjct: 86 RKPFAVINGFEVVN--ADGSIAVEAKT-------------------PGEKV-PKTE---- 119
Query: 150 SAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEG 209
P + R PL +LNPY+ T G +R
Sbjct: 120 --------------PKTPASAERNAVPLSALNPYRTPVTFASTRARAGRVR--------- 156
Query: 210 CVFNVELTDEDGTQIQATMFNEAARKFYDRF-QLGKVYYISRGTLRVANKQFKTVQNDYE 268
C ++ T A E K +F +L + R R A+K++ T NDYE
Sbjct: 157 CARSISSTKR--APPLAPRSGERRSKSTTQFSRLARFTTSPRALSRPADKRYSTSGNDYE 214
Query: 269 MNLNENSEVEEAVN---ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSI 325
MNL+ +E+E + +A Q + FV ID+L + VD++ VV+ VS +I
Sbjct: 215 MNLDGKAEIELCTDIDQSSAQKMQRAYAFVSIDKLSTKIGARGNVDVVAVVKEVSELSTI 274
Query: 326 RRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
RRKS+N + KR+I +AD++ +T+ ++LW +LA G++L A +PIVAI+S++V D+
Sbjct: 275 RRKSDNTELTKREIVLADDSTKTIRMTLWGDLAVEQGEKLA--AMTNPIVAIRSVRVSDY 332
Query: 386 QGISLSTLGRSTVLV-SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSD 444
G+S+ T+ RS +++ + D+P +LK W+ G T+ ++ G GL S + R + +
Sbjct: 333 DGVSVGTVSRSDMVIDADDIPRVAELKKWWTEGGSETTFSAAGEGLTSAGQGQKRDI--E 390
Query: 445 RVSLTHITSN---PSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSG 499
++L + PS +KPVF + A+ L KPDQ M+Y A + NKKV ++ G
Sbjct: 391 TMNLAELQPEEIAPST--DKPVFAWVCAHTILCKPDQTMYYAAVPEEGNNKKVVESDGK- 447
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
++CE + + C RYIM + DG AW++ FN+EA ++ G SA+EL+EL D
Sbjct: 448 WYCEANGQTYDTCERRYIMRFKAIDGYEGAWLNAFNDEATKMFGISANELHELHEN--DY 505
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+Y+ +K++T+ V V +EY E ++R+T V++AAESK LL ++
Sbjct: 506 KAYENAVKKMTYKHWSFLVKVVTEEYQGELKRRLTAVKCNAVNYAAESKRLLSKM 560
>gi|401425076|ref|XP_003877023.1| putative replication factor A, 51kDa subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493267|emb|CBZ28552.1| putative replication factor A, 51kDa subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 467
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 225/424 (53%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDVRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A + +VA++ LKVG F G++LS+ ++ + ++P DLP+
Sbjct: 183 AVEVTFWNDEAKAWCYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY + G G ++ S+ S A R L I S+ KP +
Sbjct: 237 VKKLATWYVTTG-GANVMSLSSQGLGAASGAGGESDRGRKYLDEIQSDGIGRGLKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C K + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+AW+++FNE G A ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
+N
Sbjct: 411 TSSN 414
>gi|146092153|ref|XP_001470220.1| putative replication factor A, 51kDa subunit [Leishmania infantum
JPCM5]
gi|134085014|emb|CAM69415.1| putative replication factor A, 51kDa subunit [Leishmania infantum
JPCM5]
Length = 467
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 224/424 (52%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A + +VA++ LKVG F G++LS+ ++ + ++P DLP+
Sbjct: 183 AVEVTFWNDEAKAWCYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY + G G ++ S+ S A R L I S KP +
Sbjct: 237 VKKLATWYVTTG-GANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C K + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+AW+++FNE G A ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
+N
Sbjct: 411 TSSN 414
>gi|398018224|ref|XP_003862293.1| replication factor A, 51kDa subunit, putative [Leishmania donovani]
gi|322500522|emb|CBZ35599.1| replication factor A, 51kDa subunit, putative [Leishmania donovani]
Length = 467
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 224/424 (52%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A + +VA++ LKVG F G++LS+ ++ + ++P DLP+
Sbjct: 183 AVEVTFWNDEAKAWCYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY + G G ++ S+ S A R L I S KP +
Sbjct: 237 VKKLAAWYVTTG-GANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C K + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+AW+++FNE G A ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
+N
Sbjct: 411 TSSN 414
>gi|157871830|ref|XP_001684464.1| putative replication factor A, 51kDa subunit [Leishmania major
strain Friedlin]
gi|68127533|emb|CAJ05550.1| putative replication factor A, 51kDa subunit [Leishmania major
strain Friedlin]
Length = 467
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 224/424 (52%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEVSSITQKSTGRELMKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A + +VA++ LKVG F G++LS+ ++ + ++P DLP+
Sbjct: 183 AVEVTFWNDEAKAWCYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDINPTDLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY + G G ++ S+ S A R L I S KP +
Sbjct: 237 VKKLATWYVATG-GANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C K + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+AW+++FNE G A ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
+N
Sbjct: 411 MSSN 414
>gi|40317150|gb|AAR84278.1| putative replication protein A subunit 1 [Leishmania amazonensis]
Length = 467
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 223/424 (52%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDVRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEVSSITQKSTGRELVKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A + +VA++ LKVG F G+ S+ ++ + ++P DLP+
Sbjct: 183 AVEVTFWNDEAKAWCYPV------GTVVALRQLKVGSFHGVPFSSTYQTKIDINPTDLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY + G G ++ S+ S A R L I S+ KP +
Sbjct: 237 VKKLATWYVTTG-GANVMSLSSQGLGAASGAGGESDRGRKYLDEIQSDGIGRGLKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C K + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+AW+++FNE G A ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
+N
Sbjct: 411 TSSN 414
>gi|402471519|gb|EJW05236.1| replication factor-a protein 1 (rpa1) [Edhazardia aedis USNM 41457]
Length = 759
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 237/477 (49%), Gaps = 54/477 (11%)
Query: 149 KSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGE 208
KS A I Q N+ + + P+ S+NP+Q W+IK R T K +++ + NARGE
Sbjct: 330 KSVANIGNFQKNNLTEENKKHVENT--PIASINPFQNKWSIKGRCTYKSDIKKFTNARGE 387
Query: 209 GCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYE 268
G +F V ++DE GT I+ + F+E F+ F+ GK + I++G +++ANK++ T +DYE
Sbjct: 388 GKLFTVNISDETGT-IKISAFSECVDMFFTIFENGKSFIITKGQVKMANKKYSTGTSDYE 446
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
+ L++NSEV +E A P+ FNFV I++L ++ D+IGVV+ PT +I +
Sbjct: 447 IYLDKNSEVTPIFDEGA--PRYFFNFVKINDLNISLHQ---ADVIGVVKEAYPTSTITLR 501
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWN---ELATNVGQELLDNADKSPIVAIKSLKVGDF 385
+ + KRD + DET + ++LW +L VG ++A L + ++
Sbjct: 502 NTGKEQKKRDFVIIDETG-NIRLTLWGSGADLPLEVGD----------VIACNCLSIREY 550
Query: 386 QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
GI LS + + V ++PDL E LK WYE+EGK + S R
Sbjct: 551 NGIVLSQISPTQVHINPDLEECFLLKGWYENEGKNIKVHKKAS--------------EQR 596
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKP--DQAMWYRACKTCNKKVTDALGSGYWCE 503
++ I N ++I + + +++Y+AC C KKV D Y CE
Sbjct: 597 YLISDIIENE---------MKWGSFIGTVLQINENSLYYQACIECKKKVIDEGEDVYRCE 647
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
C K ++C +Y + ++ D + +F+ + + G SA L +L + S Q
Sbjct: 648 KCNKTFDQCIPKYTINLQIADFTSSIRAMVFDAQGDIFFGISAKHLVDLGQK-----SSQ 702
Query: 564 MKL--KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ L K + + S+ Q+ Y E R + V ++ ++ +ESK LL+EI K +
Sbjct: 703 IDLIIKNSYLRDFIFKTSMRQESYQGETRNKYNVSSLEECNYISESKILLDEIRKSL 759
>gi|313234321|emb|CBY10388.1| unnamed protein product [Oikopleura dioica]
Length = 589
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 238/474 (50%), Gaps = 32/474 (6%)
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
V PK+++ A + R + N P R +++L PY W IK RV KG
Sbjct: 120 VSAPKKKVAVPGATGVARGKE-NAKPQT---ADGRYMSVMTLTPYMNKWCIKARVVQKGP 175
Query: 199 MRTYKNARGEGCVFNVELTDEDGT-QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVAN 257
++ Y+NA+G G +F T +DGT ++ + FN+ KF++ + GKV IS G L+ N
Sbjct: 176 LKEYQNAKGAGKLF--AFTVDDGTCNLKISAFNDEVDKFFNIVEKGKVVTISNGQLKPKN 233
Query: 258 KQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQ 317
Q+ + +DYE L + +EE +++ IPQ FNF PI ++ VD+ V+
Sbjct: 234 AQYNSTNHDYECTLGRMTTIEEVMDDCDDIPQMTFNFEPISKIISDRAKGAFVDVCAVIN 293
Query: 318 NVSPTMSIRRKSNNEMVPKRDITVADE-TKRTVTVSLWNELATNVGQELLD-NADKSPIV 375
V +I ++ ++ KRD+ + D+ TK + +LW GQ+ +D +A + ++
Sbjct: 294 EVGAIDTINTRAGKQL-EKRDLEIVDDSTKEKMRCTLW-------GQQAVDFSASRGQVM 345
Query: 376 AIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
A+K+ VG+FQG +LS S +++ +KL W+ EG+ + S K
Sbjct: 346 AVKAASVGEFQGKTLSVGRDSEIILDFAEDHGQKLNVWWTQEGQDAAFEGQSGAGSSGGK 405
Query: 436 NGARSMYSDRVSLTHITSNPSL-GDEKPVFFSIKAYISLIKPDQAMWYRAC-----KTCN 489
++ V L I + D+KP +F+ K Y++ IK ++ M Y+ C + CN
Sbjct: 406 R------NEMVLLDSIMQGANYQTDDKPYWFNSKCYLTYIKKERMM-YKGCPGKDDQKCN 458
Query: 490 KKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
KK+ + Y CE C +N + + R +M A V DG G+ + + F E AE+I+G ADEL
Sbjct: 459 KKLIEEDDGMYRCEKCNQNFQNFNYRIMMQAAVTDGRGQQYCTFFGETAEQILGKPADEL 518
Query: 550 NELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDF 603
E+ + D N + + + + +L + Y +E+R +V + VA +DF
Sbjct: 519 GEMFNS--DGNEFDDFINTKSCLEFILGGRAKCEIYQDEQRLKVAAQRVAQIDF 570
>gi|403370207|gb|EJY84965.1| hypothetical protein OXYTRI_17183 [Oxytricha trifallax]
Length = 684
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 249/474 (52%), Gaps = 32/474 (6%)
Query: 157 DQNGNMAPAARLAMTRRVH-PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
D +GN + R++ + ++ P+ LN + +W IK RV KG + ++NA+GEG + N +
Sbjct: 222 DYDGNRSK--RMSSIQEMYTPIRMLNNFTKDWKIKARVIQKGQKKEWRNAKGEGVLLNAD 279
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L D +GTQIQAT F EAA K+ VY S G +++ANK+F +++ND+ + ++N+
Sbjct: 280 LIDHEGTQIQATFFGEAAHKYDQMLHENHVYLFSNGQVKIANKKFTSIKNDHCLTFDQNA 339
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
E+ E ++ I F+FV + + + + G + +D+IGV+ +S T SI KS +
Sbjct: 340 EISEVQDDNQ-IKSQGFSFVTLRNIEKVMAG-QAIDVIGVITEISNTSSIPLKS-GQNKD 396
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL-G 394
+R+IT+ADE++ +++SLW L T E + ++A+K+++V D+ G SL+
Sbjct: 397 RRNITIADESEAKISLSLWGNLCTQYSYE------EGQVMAVKNVRVSDYGGKSLNCGDD 450
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS--DRVSLTHIT 452
S + ++P +L W ++ G ++ ++ G+G G+R Y +S T +
Sbjct: 451 HSLIYLNPADKRTDQLMQWSQTGGAKKNLQNLSGGVGGGDS-GSRDNYRLVREMSDTLLH 509
Query: 453 SNPSLGDE-KPVFFSIKAYISLIKPDQ--AMWYRACKTCNKKVTDALGSGYWCEGCQK-- 507
N D+ P +F + YIS I D+ M++ C C KK + G YWCE C K
Sbjct: 510 ENSDRNDKTAPQYFKLSGYISKILYDENRMMYFPGCPECKKKCS-PQGDQYWCEKCNKAL 568
Query: 508 NDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK-- 565
N + + Y + A+ D S +IS +E AE I+G A + S++ +D S ++
Sbjct: 569 NHNQVRMTYTVTAKFDDLSDGIFISFMSESAEPIMGMPASDF----SRIREDQSNSLEFI 624
Query: 566 ---LKEVTWVPHLLRVSVAQQEYN-NEKRQRVTVRAVAPVDFAAESKFLLEEIS 615
L E ++ + V A +YN NE R + P+D E++ LL ++
Sbjct: 625 RDLLNEKSFNYYTFVVKAALDDYNINEARFKYQAVRSQPLDMNEENQMLLRRLN 678
>gi|2833320|sp|Q23696.1|RFA1_CRIFA RecName: Full=Replication factor A 51 kDa subunit; AltName:
Full=RP-A p51; AltName: Full=Replication factor-A
protein 1; Short=RF-A protein 1; AltName:
Full=Single-stranded DNA-binding protein P51 subunit
gi|413772|emb|CAA80682.1| replication protein A 51 kilodalton subunit [Crithidia fasciculata]
Length = 467
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 220/424 (51%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RV K ++RT+ +G +F+ L DE I+AT+F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVADKSDIRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET--AFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + SEV A ++ A +
Sbjct: 65 NDAVDTFEPLVVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRASEVILARQDSSAAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D +
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEISSITQKSTGRELIKRNVKIGDMSA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A N +VA++ LKVG F G++LS+ ++ + V+P DLP+
Sbjct: 183 AVEVTFWNDEAKAW------NYPVGTVVALRQLKVGSFDGVTLSSTYQTKIDVNPADLPD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY S G G ++ S+ S G R L I S KP +
Sbjct: 237 VKKLATWYVSTG-GANVVSLSSQGLGAGGGGGGEGNRGRKYLDEIQSEGIGRGAKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDATVVP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+ W+++FNE G A +ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQVWLTLFNEAGVEFFGMEA---SELKRRAQEDPLYIAKLAQARMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
N
Sbjct: 411 TNAN 414
>gi|71756127|ref|XP_828978.1| replication factor A 51kDa subunit [Trypanosoma brucei TREU927]
gi|70834364|gb|EAN79866.1| replication factor A, 51kDa subunit, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261334907|emb|CBH17901.1| replication factor A, 51kDa subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 463
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 234/443 (52%), Gaps = 29/443 (6%)
Query: 179 SLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
SL+P+ G W I+ RVT K +RT+ +G +F+ L DE + I+AT+FNEA F
Sbjct: 14 SLSPFLGGKWWIRARVTDKSEIRTWNKPTSQGKLFSFTLIDESAS-IRATVFNEAVDMFN 72
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE-TAFIPQTKFNFVP 296
G+VYY S G ++ AN++F V NDYE++ + ++ A + ++ IP ++NFVP
Sbjct: 73 PLIVNGQVYYFSGGQVKNANRKFSNVNNDYELSFDNTCQISAARDVVSSSIPLQRYNFVP 132
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I L + G+ LVD++ VV NV +I ++S + +R + VAD T + V+LWNE
Sbjct: 133 IAILKQREVGS-LVDVLAVVLNVEELGTIVQRSTGRELVRRTVKVADSTA-GIDVTLWNE 190
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A + ++A++ LKVG F G++LST +S+ V+P++P+ KKL+ W+ES
Sbjct: 191 NAKEWPHQ------PGTVLAMRQLKVGSFDGVTLSTTMQSSFDVNPNIPDVKKLREWFES 244
Query: 417 EGKG--TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
G +S++ G+ LA +G Y + IT+ KP + ++ +
Sbjct: 245 TGGRDVSSLSMQGNNALGLASSG--ETYRGYKYIDDITTEGLGKGPKPDYIDLRCVPVYL 302
Query: 475 KPDQAMWYRACKTCNKKVT--DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
K D WY AC CNKKV A+G + CE C ++ + RY++ +V D + W++
Sbjct: 303 KQD-TQWYDACPQCNKKVMLEGAMGDRFRCEKCDQSIVP-TQRYLVSIQVTDNVSQVWLT 360
Query: 533 IFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQEY-NNEKR 590
+FNE G +A ELK + +D + K+ ++ P L+R+ V ++ NE
Sbjct: 361 LFNESGAEFFGMTAP---ELKRRQEEDPMFVTKVAQMRMNRPVLMRLRVKEEGLGGNEDS 417
Query: 591 QRVTVRAV-----APVDFAAESK 608
+RV + V P+D E K
Sbjct: 418 ERVRLNVVRITEFMPLDTVTEDK 440
>gi|429963164|gb|ELA42708.1| replication factor-a protein 1 (rpa1) [Vittaforma corneae ATCC
50505]
Length = 588
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 281/582 (48%), Gaps = 45/582 (7%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY N SDG +KA+ S L++ S I +I+L + + P + YL +
Sbjct: 43 RYKANLSDGTHYMKAVFSSELANIFDSNEIARFYVIKLGSFTVR--PKDNSNYLYIQSIA 100
Query: 101 VVSPALEMEIKIEVKSDESGIIFKP----KQEDEVKKDGPGIVLKPKQEMVAKSAAQILR 156
E E V F P K E+EV+K+ + PK + L
Sbjct: 101 AYE-KFESEFGHSVNISSGKPSFDPSGSNKNEEEVQKENSRQSVSPKSATNNEMHYATLS 159
Query: 157 DQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
+++ + A + + + P++ + K RV SK ++ + +G+G VF+ E+
Sbjct: 160 VNQEDVSKRFKEAANEDITDIKKIFPHKKTFKFKGRVVSKTEIKKFTTQKGDGQVFSFEI 219
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D G QI+ F+E FY + K Y IS T++ +NK+F +D+E++L +N+
Sbjct: 220 ADCTG-QIKCVAFSECVDTFYPLVENNKAYVISNVTVKPSNKKFSNNTSDFEIHLEKNTI 278
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+ + ++ IP+ F FV I +L V G +VD + V++ P I KS K
Sbjct: 279 ITKVEDDN--IPKYMFKFVKIADLAS-VGG--VVDCLAVIKEAYPVGKITIKSTGRESAK 333
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
RD+ + D+T + ++LW G + + +K I+ + S+KVGD+ GI+L+T+ S
Sbjct: 334 RDLMIIDQTG-SCRLTLW-------GPKAEEEYEKDNIICLGSVKVGDYNGINLTTVSNS 385
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
V+ + +LPEA +L +WYE +G+ + + RS S+
Sbjct: 386 QVIQNIELPEAIELLAWYEEKGRNIVIEK-------PKRIPKRSFISE------------ 426
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSL 514
+ D + +I+ + +K ++ ++Y AC +TCNKKV + CE C E+C+
Sbjct: 427 VKDNSLEYATIQGSVVYLK-EEGLFYEACPSETCNKKVLMEDNGIFRCEKCNYTFEKCNY 485
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPH 574
RY++ V D +G+ WI+IF+E + ++G +A EL E+ + +N + + +K +
Sbjct: 486 RYMINIHVGDFTGQMWITIFDEGGKSLLGVTAAELKEM-GECNPENVHNL-IKGIYSKEL 543
Query: 575 LLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ ++ YN + + R + ++PVD+ E+K +LE I K
Sbjct: 544 QFRLRNKEENYNGDIKLRSSCLEISPVDYVFETKRMLEAIEK 585
>gi|324505436|gb|ADY42337.1| Replication factor A 73 kDa subunit [Ascaris suum]
Length = 613
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 178/641 (27%), Positives = 313/641 (48%), Gaps = 61/641 (9%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGN-----RYMFNASDGKKRLKAIL 57
+ ++ D LSN D+ + P V+Q+LD + N R+ F SDG
Sbjct: 5 RDLTNDFFQRFLSND--DNCPEKP--VLQILDARPIKNNPTDKRHRFRLSDGVFSYSTCT 60
Query: 58 PSNLSSEVISGNIQNKG--LIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+ ++ + + +G +IR+L Y +P KS+K V + ++ S A+ I EV
Sbjct: 61 NQSQIADRVEADKLGEGHPVIRILRYLKQAVP-KSDK---VPQGKI-SLAI---IDYEVL 112
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARL------- 168
+ + I+ +P ++D G+ + +S + + NG AR
Sbjct: 113 ARDLPILGQPIPHSCNERDYRGM----NANAIGQSVSHVQPQGNGQPQYIARRNPPTPNR 168
Query: 169 ---AMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
+ + + P+ + PY W I VT+K ++R K ARGE VFN E+TDE+G I+
Sbjct: 169 ATSLIGQNLTPIRLITPYVNKWRICGVVTAKEDLRDVKTARGELKVFNFEVTDEEGGCIR 228
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ET 284
F + A KFY Q G +YYIS GT++ ANK++ T +DYE+ + ++E+ ++ E
Sbjct: 229 IAAFGDTADKFYAIVQKGSMYYISGGTVKQANKRYNTTGHDYELTMRSDTEISPCIDRER 288
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
P+ N VP+ + + +DII ++ VS + ++S ++ KRD+ + DE
Sbjct: 289 IEEPRLNLNVVPLAMVSS--RAGQCIDIIAIIDQVSELQQVTQRSTGALLEKRDLHLIDE 346
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPD 403
+ V ++LW E A + +L A V +K V +F G SLS L + + ++PD
Sbjct: 347 SGAVVVLTLWGEQARSHDVDLQHQA-----VGVKGASVREFNGSYSLSALNSTRIEINPD 401
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG--DEK 461
E+K L WY + + I + GS+ + Y+ + L I +LG ++K
Sbjct: 402 CDESKALYVWYREKRPSIDVKRITT--GSMGGDS----YARDLRLIGIADAMNLGRNEDK 455
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
+F++ A IS +K D A+ Y++C T C KKV + + + Y CE C + ++
Sbjct: 456 GAYFNVTAMISSLKADGAL-YKSCGTNGCKKKVIE-MDNQYRCEKCNLTLDSFKYVLLLS 513
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNE-LKSQLGDDNSYQMKLKEVTWVPHLLRV 578
+ D SG W+++F E+A +++G +A EL + L+S D+ Y V + + R+
Sbjct: 514 MELSDFSGSHWVTVFEEKATKLLGKTAAELGDLLESNRLDE--YNDVFSAVRFREYTFRI 571
Query: 579 SVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
+ YN+ +R + +V + VD+ K+ +EE++K V+
Sbjct: 572 RAKSEFYNDTERIKWSVFELNNVDY---DKY-VEELTKAVT 608
>gi|344230770|gb|EGV62655.1| hypothetical protein CANTEDRAFT_115222 [Candida tenuis ATCC 10573]
Length = 376
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 205/388 (52%), Gaps = 27/388 (6%)
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
Y+ Q GKVYYIS+ ++ A QF + + YE++L+ ++ VEE + +P+ KFNF
Sbjct: 2 YETLQEGKVYYISKARIQAAKPQFSRLSHPYELSLDRDTIVEECFSNNGNVPKLKFNFTK 61
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
++++ T ++D++GV++ V P I KS + +RDI + D++ ++TV LWN
Sbjct: 62 LNQIQSAEPNT-VIDVVGVLREVKPAFQITSKSTGKPFDRRDIDIVDDSNFSITVGLWNA 120
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
A + N + ++A K K+ DF G SL+ ++L +PD PEA +LK WY++
Sbjct: 121 TAIDF------NLSEGTVIAFKGCKIQDFGGRSLTLTQTGSILPNPDAPEAYQLKGWYDN 174
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMY-SDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
+G + ++ A N + Y +R ++ + E+P FFS+KA I+ K
Sbjct: 175 QGSNETFQTLK------ADNAGSANYIKNRKTIAQVKEENLGAQEQPDFFSVKATINFFK 228
Query: 476 PDQAMWYRAC--------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGS 526
+ Y AC CN+K+ D G G W CE C N E + RYI+ + D +
Sbjct: 229 T-ETFCYPACVNKQEASNNLCNRKIIDQ-GDGTWRCEKCDINYSEATYRYILNCSIMDAT 286
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
+ W ++F++EA +I G SA+EL LK ++ ++ ++ VT R+ Q YN
Sbjct: 287 EQLWATLFDQEASKIFGVSANELLVLKE--SNEAEFKKVVEAVTMKEFSFRLKARQDSYN 344
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEI 614
E R R AV +DFAAE FL++E+
Sbjct: 345 GESRIRYQTMAVYDIDFAAECDFLVKEL 372
>gi|15148880|gb|AAK84867.1|AF399823_1 replication protein A subunit 1 [Leishmania infantum]
Length = 467
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 221/424 (52%), Gaps = 22/424 (5%)
Query: 171 TRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+ ++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE I A +F
Sbjct: 6 SHQIQPIDSLTPFLGGKWWIRARVTDKTDIRTWNKPTSQGKLFSFTLIDESAA-IGANVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE--TAFI 287
N+A F G+VYY S G ++ AN++F V NDYE+ + +SE+ A + TA +
Sbjct: 65 NDAVDTFEPLIVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRSSEIMLARQDTSTAAL 124
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++NFVPI+ L + G+ LVD++GVV V SI +KS + KR++ + D T
Sbjct: 125 PMQRYNFVPIELLKQREVGS-LVDVLGVVLKVDEVSSITQKSKGRELVKRNVKMGDMTA- 182
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPE 406
V V+ WN+ A + +VA++ LKVG F G++LS+ ++ + ++P DL +
Sbjct: 183 AVEVTFWNDEAKAWCYPV------GTVVALRQLKVGSFDGVTLSSTYKTKIDINPTDLAD 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KKL +WY + G G ++ S+ S A R L I S KP +
Sbjct: 237 VKKLATWYVTTG-GANVTSLSSQGLGAASGAGGESDRGRKYLDEIQSEGIGRGLKPEYVD 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTD--ALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
++ K D A WY AC TCNKKVT+ A G + CE C K + RY++ +V D
Sbjct: 296 VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDKTVTP-TQRYLVSIQVTD 353
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQ 583
+AW+++FNE G A ELK + +D Y KL + P ++R+ V ++
Sbjct: 354 NVSQAWLTLFNEAGIEFFGMEA---AELKRRAQEDPLYIAKLAQGRMNRPVVMRLRVKEE 410
Query: 584 EYNN 587
+N
Sbjct: 411 TSSN 414
>gi|407853189|gb|EKG06272.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi]
Length = 465
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 232/453 (51%), Gaps = 33/453 (7%)
Query: 172 RRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE + I+AT+FN
Sbjct: 7 QQIQPIDSLTPFLGGKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLIDESAS-IRATVFN 65
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQ 289
+A F G+VYY+S G ++ AN++F V NDYE+ + +S++ A + +A IP
Sbjct: 66 DAVDLFNPLIVNGQVYYLSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPSSATIPL 125
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
++NFVPI L + G+ LVD++ VV +V SI +KS + KR++ V D T V
Sbjct: 126 QRYNFVPIAILKQREVGS-LVDVLAVVLSVEELSSITQKSTGRELIKRNVKVGDITA-AV 183
Query: 350 TVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
V+LWN+ A SP ++A++ LKVG F G++LS +S V+P++P+
Sbjct: 184 EVTLWNDQAKEWAY--------SPGTVLAMRQLKVGSFDGVTLSATFQSAFDVNPNIPDV 235
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
KKL WY S G G ++S+ S N Y R I++ K F +
Sbjct: 236 KKLAEWYISTG-GRDVSSLSSLGVGAGNNAGGENYRGRKYFDDISAEGLGRGPKADFIDV 294
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVT--DALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
+ +K D A WY AC CNKKVT A G Y CE C + + RY++ + D
Sbjct: 295 RCVPVYLKQD-AQWYDACPQCNKKVTLEGAQGERYRCEKCDRQVVP-TQRYLVSIQASDN 352
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQE 584
+ W+++FNE G A ELK Q D + K+ ++ P +R+ V ++
Sbjct: 353 VSQKWLTLFNEAGVEFFGMPA---TELKKQQEADPMFVTKIAQLRMNRPVQMRLRVKEES 409
Query: 585 YNN------EKRQRVTVRAV---APVDFAAESK 608
++ R R+TV + P+D +E K
Sbjct: 410 SSSAAGGEESDRVRLTVMRLNEFMPLDTVSEEK 442
>gi|407420060|gb|EKF38438.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 465
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 230/451 (50%), Gaps = 29/451 (6%)
Query: 172 RRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE + I+AT+FN
Sbjct: 7 QQIQPIDSLTPFLGGKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLIDESAS-IRATVFN 65
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQ 289
+A F G+VYY+S G ++ AN++F V NDYE+ + +S++ A + +A IP
Sbjct: 66 DAVDLFNPLIVNGQVYYLSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPSSATIPL 125
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
++NFVPI L + G+ LVD++ VV +V SI +KS + KR++ V D T V
Sbjct: 126 QRYNFVPIAILKQREVGS-LVDVLAVVLSVEELSSITQKSTGRELVKRNVKVGDITA-AV 183
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
V+LWN+ A ++A++ LKVG F G++LS +S V+P++P+ KK
Sbjct: 184 EVTLWNDQAKEW------TYSPGTVLAMRQLKVGSFDGVTLSATFQSAFDVNPNIPDVKK 237
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
L WY S G G ++S+ S N Y R I++ K F ++
Sbjct: 238 LAEWYISTG-GRDVSSLSSLGVGAGNNAGGENYRGRKYFDDISAEGLGRGPKADFIDVRC 296
Query: 470 YISLIKPDQAMWYRACKTCNKKVT--DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
+K D A WY AC CNKKVT A G Y CE C + + RY++ + D
Sbjct: 297 VPVYLKQD-AQWYDACPQCNKKVTLEGAQGERYRCEKCDRQVVP-TQRYLVSIQASDNVS 354
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQEYN 586
+ W+++FNE G A ELK Q D + K+ ++ P +R+ V ++ +
Sbjct: 355 QKWLTLFNEAGVEFFGMPA---TELKKQQEADPMFVTKIAQMRMNRPVQMRLRVKEESSS 411
Query: 587 N------EKRQRVTVRAV---APVDFAAESK 608
+ R R+TV + P+D +E K
Sbjct: 412 SAAGGEESDRVRLTVMRLNEFMPLDTVSEEK 442
>gi|323449521|gb|EGB05408.1| hypothetical protein AURANDRAFT_11223 [Aureococcus anophagefferens]
Length = 366
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 194/372 (52%), Gaps = 23/372 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ SLNPY WT+K +V K ++ ++ NARG+G +F V L D DG +I+A F EA K
Sbjct: 1 PVASLNPYMNRWTLKAKVAVKNDIVSWSNARGDGTLFKVTLADADGEEIEAVFFKEACAK 60
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF---IPQTKF 292
++ G VYY S G ++ +N ++ + YE+ + S++E + + I TK+
Sbjct: 61 YHAALVEGGVYYFSGGKVKPSNPRYSATKCGYEVTFDMASKIEACADASGIGLCIGGTKY 120
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMS-IRRKSNNEMVPKRDITVADETKRTVTV 351
+FV I L + G +++D++ VV+ + +K + + KRD+T+ D + V +
Sbjct: 121 DFVKISALEQADEG-QVIDVLAVVKTAEDCAEVVSQKLGGKTLTKRDVTLVDASGVDVRL 179
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSP-DLPEAKK 409
+LW E A D +P+VA+K +KV ++QG SL L S V P D ++
Sbjct: 180 TLWGERAKQ------DQFAAAPVVALKGVKVSEYQGTKSLGFLRSSRVAFEPEDAAGYEE 233
Query: 410 LKSWYESEG---KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFF 465
LK+W+ + G TS++ + + G L ++DR L + + G +KP +
Sbjct: 234 LKAWWANGGASAASTSLSRVSNAGGGLKGE----KFADRRGLQDLKDDARFGQGDKPDYA 289
Query: 466 SIKAYISLIKPDQAMWYRAC-KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
+ KA + +K D+ +WY +C C KKVT Y CE C EEC RYI+ D
Sbjct: 290 TFKATLMKVKEDR-LWYESCGDGCQKKVTQGTDGTYSCEKCGTTKEECERRYIVSCCFVD 348
Query: 525 GSGEAWISIFNE 536
SG +W+S FN+
Sbjct: 349 ASGSSWVSAFND 360
>gi|71664069|ref|XP_819019.1| replication factor A, 51kDa subunit [Trypanosoma cruzi strain CL
Brener]
gi|70884302|gb|EAN97168.1| replication factor A, 51kDa subunit, putative [Trypanosoma cruzi]
Length = 465
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 231/453 (50%), Gaps = 33/453 (7%)
Query: 172 RRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+++ P+ SL P+ G W I+ RVT K ++RT+ +G +F+ L DE + I+AT+FN
Sbjct: 7 QQIQPIDSLTPFLGGKWWIRARVTDKSDVRTWNKPTSQGKLFSFTLIDESAS-IRATVFN 65
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQ 289
+A F G+VYY+S G ++ AN++F V NDYE+ + +S++ A + +A IP
Sbjct: 66 DAVDLFNPLIVNGQVYYLSGGQVKNANRKFSNVNNDYELTFDSSSQISLARDPSSATIPL 125
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
++NF+PI L + G+ LVD++ VV +V SI +KS + KR++ V D T V
Sbjct: 126 QRYNFLPIAILKQREVGS-LVDVLAVVLSVEELSSITQKSTGRELIKRNVKVGDITA-AV 183
Query: 350 TVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
V+LWN+ A SP ++A++ LKVG F G++LS +S V+P++P+
Sbjct: 184 EVTLWNDQAKEWAY--------SPGTVLAMRQLKVGSFDGVTLSATFQSAFDVNPNIPDV 235
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
KKL WY S G G ++S+ S N Y R I++ K F +
Sbjct: 236 KKLAEWYISTG-GRDVSSLSSLGVGAGNNAGGENYRGRKYFDDISAEGLGRGPKADFIDV 294
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVT--DALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
+ +K D A WY AC CNKKVT A G Y CE C + RY++ + D
Sbjct: 295 RCVPVYLKQD-AQWYDACPQCNKKVTLEGAQGERYRCEKCDRQVVPTQ-RYLVSIQASDN 352
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW-VPHLLRVSVAQQE 584
+ W+++FNE G A ELK Q D + K+ ++ P +R+ V ++
Sbjct: 353 VSQKWLTLFNEAGVEFFGMPA---TELKKQQEADPMFVTKIAQLRMNRPVQMRLRVKEES 409
Query: 585 YNN------EKRQRVTVRAV---APVDFAAESK 608
++ R R+TV + P+D +E K
Sbjct: 410 SSSAAGGEESDRVRLTVMRLNEFMPLDTVSEEK 442
>gi|290999555|ref|XP_002682345.1| single-stranded DNA-binding replication protein A large subunit
[Naegleria gruberi]
gi|284095972|gb|EFC49601.1| single-stranded DNA-binding replication protein A large subunit
[Naegleria gruberi]
Length = 598
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 236/454 (51%), Gaps = 36/454 (7%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+ P+ +LNPY W IK RVT K +M+ + +G +F++EL DE G QI+AT FN+
Sbjct: 164 QAKPISNLNPYDKVWVIKARVTQKSDMKHWDKGTSKGSLFSIELLDEYGGQIRATFFNDV 223
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A+K+YD + VY+ S G L+ AN++F T+ + YE+ + ++ ++ A + IP F
Sbjct: 224 AKKYYDAIKERSVYFFSGGKLKDANRKFTTIPHPYEITFDRDTVIQNARDSE--IPTDTF 281
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR---TV 349
N + ++ V ++D+ GVVQN+ T K NN + +I++ D++ TV
Sbjct: 282 NCTRLCDMTN-VEDNMILDVAGVVQNIGETKEFTTK-NNRKTKRCNISLIDDSSSPFCTV 339
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
+++W ++ + D +V +KS++ ++ G+SL+T+ + + P +P ++
Sbjct: 340 DLTIWGDMCDTHDMQQGD------VVILKSVRKSNYGGVSLNTINSTRIFKDPGIPIYQQ 393
Query: 410 LKSWYES-----EGKGTSMASIGSGLGSLAKNGARSMYSD--RVSLTHITSNPSLGDEKP 462
L WY++ +G+G + + + S +++ +D +S+ +T+ P
Sbjct: 394 LSEWYQNNEGSFDGEGIKLTQKQAAVNSERTFKRKNVIADCKNMSVDTVTA--------P 445
Query: 463 VFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
+ +I+AY+S IK +WY AC K CNKKV G Y C C + + C+ +++
Sbjct: 446 DYLTIRAYVSYIK--HELWYDACTNKECNKKVQQNEGI-YHCSSCNHSSDTCTRKFLANL 502
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
+ D +G+ + + FN+ E++ S +++ ++ + L E T+ ++ V V
Sbjct: 503 GITDWTGKQYCNAFNQAVEKLF--SDMTADDMCARAAEPEYMPYLLGEKTFTRYVFTVRV 560
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
E E + + T+ V P+D+A E+K +L I
Sbjct: 561 T-TETTKEPKLKFTIIRVTPIDYAREAKSILSLI 593
>gi|308811891|ref|XP_003083253.1| Single-stranded DNA-binding replication protein A (RPA), large (70
kD) subunit and related ssDNA-binding proteins (ISS)
[Ostreococcus tauri]
gi|116055132|emb|CAL57528.1| Single-stranded DNA-binding replication protein A (RPA), large (70
kD) subunit and related ssDNA-binding proteins (ISS)
[Ostreococcus tauri]
Length = 718
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 246/472 (52%), Gaps = 34/472 (7%)
Query: 166 ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
AR ++ L LNPYQ WT++ R+T + +R+Y N +G+G V E+ D +GT+++
Sbjct: 96 ARNEAPSQIRTLNELNPYQNRWTVRARITGRLELRSYSNTKGDGKVLGFEILDAEGTEMK 155
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETA 285
F +AA +F + G+VY IS+ ++ A++ K + YEM ++N+ E +
Sbjct: 156 CVGFGDAAVRFSNELHHGRVYEISKASIS-ASRNPKYAIHQYEMKFDQNTVFVECPDAER 214
Query: 286 FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
I + ++ F + +L + G E+ D+IG+ +V +I ++ E KR + + D +
Sbjct: 215 SIEKVRYKFKKVADLATAMPG-EMADVIGIAYHVGELATIMKRDGGETT-KRSVMIRDNS 272
Query: 346 KRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
+ +LW+ + +G ++ L + + P++A+K+ +VG+FQG ++ T+G ++V ++PD
Sbjct: 273 DAAIEFTLWDPHSVELGGQIESLIASGEKPVIAVKNARVGEFQGKNMGTVGSTSVEINPD 332
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE--- 460
EA +++ W++ +G + A S G+ G+ + +S+ I LGDE
Sbjct: 333 REEATEMRIWFD---QGGADAQFTSLSGTGGGEGSGRSGGNVLSIGRIV---QLGDELMA 386
Query: 461 ----KPVFFSIKAYISLIKPDQ-AMWYRAC------KTCNKKVTDALGSGYWCEGCQKND 509
+ + A I IKP Q +Y +C + C KK+ +G W C+++
Sbjct: 387 QGEGAVAYVNTCAMIKHIKPGQEGPFYASCPLMNGERQCMKKLRTVDDTGVW--SCERHS 444
Query: 510 ----EECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQM 564
E RY+ + D S E W+++F E E+++ G +A E+ + + D+ ++
Sbjct: 445 GEHIEAADWRYMFSCVIADHSAEQWVTVFGSEGEKVMSGMTAGEMRRMFDEQPDE--FEK 502
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
L + + LR+ VA Y + R + T+ ++P++FAA +K LLE+I+K
Sbjct: 503 FLVGRHFNMYQLRLKVAVDTYGDMPRIKCTLAEISPINFAAANKKLLEKIAK 554
>gi|440491670|gb|ELQ74291.1| Single-stranded DNA-binding replication protein A
[Trachipleistophora hominis]
Length = 577
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 167/631 (26%), Positives = 286/631 (45%), Gaps = 84/631 (13%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLK-LTGN-----RYMFNASDGKKRLKAILP 58
+ P + + +N D P VVQ+L LK + G RY SDGK +K I
Sbjct: 2 LKPGTVEALYNNTKDSPLYDTP--VVQLLSLKKIEGKSDKTVRYHITISDGKLYMKGIFS 59
Query: 59 SNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDE 118
S +S EV G+I+ +I++ D+ + + ++ + CE + + S E
Sbjct: 60 SQVSKEV--GDIKVNTIIKISDFVI--LEKNGNCFIYIKGCEKIRDCERVGSPKNASSTE 115
Query: 119 SGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ-------ILRDQNGNMAPAARLAMT 171
K + V+ D I K ++ AK A + D NG A +
Sbjct: 116 -------KVDSSVEMDSSKI--KQSEKNTAKRAPDENNNKRVQVGDNNGKTAKESVTGTN 166
Query: 172 -------RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
+ P+ +LNP+Q W +K V K MR +K + +G F+ EL D+ G I
Sbjct: 167 NSTDDEKKAYTPIAALNPFQTKWIVKGTVQKKSEMREFK--KKDGKFFSFELLDKTG-NI 223
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
+ FN+ A FY G V IS+ +++ NK+F +DYE++L +NS V +NE
Sbjct: 224 KCVAFNDGADLFYGMIVEGSVVEISKAVVKMCNKKFANTSSDYEIHLEKNS-VVSLLNEE 282
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
++ I L VN D+IG+V P + K++ + KRD+ +ADE
Sbjct: 283 GL--SMSYDLCKISNLAGRVNKAN-CDVIGIVHEAFPVSVVLAKASQREIKKRDLVLADE 339
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPD 403
T TV +LW G + D P++ +K ++VG+F + LST S V V P+
Sbjct: 340 TG-TVRATLW-------GDKSEIELDDHPVLLLKDVRVGEFNNAVVLSTAFGSAVKVDPE 391
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPV 463
+ EA L+ WY+ + + R +D + I
Sbjct: 392 MDEAYALRGWYDEHKQSVVV--------------ERPQRNDYAFIEEIQG---------- 427
Query: 464 FFSIKAYISLIKPDQAMWYRAC-KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
+ + A + I+ D ++Y AC CNKKV+ GY+CE C + E C++RY+ V
Sbjct: 428 YGTCSATVLFIREDN-LFYNACANNCNKKVS-LTDEGYYCERCNQTREICNIRYLTTLHV 485
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK--LKEVTWVPHLLRVSV 580
D + + W+++F++ G +A EL ++G++N+ Q++ LK + + +++++
Sbjct: 486 ADFTQQVWLNVFDDFCTEFFGMTAVEL----KKMGEENATQLQNYLKTLLYREYVIKMKR 541
Query: 581 AQQEYNNEKRQRVTVRAVAPVDFAAESKFLL 611
+++ YN E R R ++ +++ ES +L
Sbjct: 542 SEEVYNGEMRVRWRGLSIKKINYLDESVRML 572
>gi|429966174|gb|ELA48171.1| replication factor-a protein 1 (rpa1) [Vavraia culicis
'floridensis']
Length = 612
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 165/605 (27%), Positives = 283/605 (46%), Gaps = 74/605 (12%)
Query: 29 VVQVLDLK-LTGN-----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
VVQ+L LK + G RY SD K +K I S +S +V G+++ LI++ D+
Sbjct: 55 VVQLLSLKKIEGKSDKTVRYHITISDSKLYMKGIFSSQVSKDV--GDLRVNTLIKISDFV 112
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEM----------EIKIEVKSDESGIIFKPKQEDEVK 132
+ + ++ + CE + M ++ V+ D S I K E+E +
Sbjct: 113 I--LEKNGNCFIYIKGCEKIKDCERMGSPKNANSTDKVDSSVEMDSSKIKHNEKGENEKR 170
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAM--TRRVHPLVSLNPYQGNWTIK 190
K+ V S + ++ G + A A + P+ +LNP+Q W +K
Sbjct: 171 AVNEN---SSKRMQVGSSNGKAEKENAGCVRSANHDADGDKKAYTPIAALNPFQTKWIVK 227
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
V K +R +K + +G F+ EL D+ G I+ FN+ A F+ G V IS+
Sbjct: 228 GTVQKKSELREFK--KKDGKFFSFELLDKTG-NIKCVAFNDGADLFHGIVAEGSVVEISK 284
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
+++ NK+F +DYE++L +NS V VNE F+ I +L VN
Sbjct: 285 AVVKMCNKKFANTSSDYEIHLEKNSVVS-LVNEEGL--AMSFDLCKISDLVGRVNKAN-C 340
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IGVV P + K++ + KRD+ + D+T TV +LW G + D
Sbjct: 341 DVIGVVHEAFPVSVVLAKASQREIKKRDLILVDQTG-TVRATLW-------GDKSEIELD 392
Query: 371 KSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+ P++ +K ++VG+F + LST S V V P++ EA L+ WY+ +
Sbjct: 393 EHPVLLLKDVRVGEFNNAVVLSTAFGSAVKVDPEMDEAYSLRGWYDEHKQSV-------- 444
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC-KTC 488
+ + R+ Y T I S G + A + I+ D ++Y AC C
Sbjct: 445 ---VVERPQRNEY------TFIEEIQSYG-------TCAATVLFIREDN-LFYNACANNC 487
Query: 489 NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
NKKV+ GY+CE C + E CS+RY+ V D + + W+++F++ G +A E
Sbjct: 488 NKKVS-LTDEGYYCERCNQTKETCSIRYLTTLHVADFTQQVWLNVFDDFCTEFFGMTAYE 546
Query: 549 LNELKSQLGDDNSYQMK--LKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
L ++G++N+ Q++ LK + + +++R+ +++ YN E R R ++ +++ E
Sbjct: 547 L----KKMGEENATQLQNYLKTLLYKEYVIRMKRSEEVYNGEMRVRWRGLSIKKINYLDE 602
Query: 607 SKFLL 611
S +L
Sbjct: 603 SVRML 607
>gi|114145419|ref|NP_001041308.1| replication protein A 70 kDa DNA-binding subunit [Rattus
norvegicus]
gi|33086646|gb|AAP92635.1| Cb1-727 [Rattus norvegicus]
Length = 680
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 216/410 (52%), Gaps = 30/410 (7%)
Query: 29 VVQVLDLK--LTGN---RYMFNASDGKKRLKA-ILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+QV++++ TGN RY SDG L + +L + L++ V G + + + ++ +
Sbjct: 11 VLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNALVEGGQLASNCVCQVHRFI 70
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKI--EVKSDESGIIFKPKQEDEVKKDGPGIVL 140
+N + + +I+ EVV A E+ +KI V +E + +
Sbjct: 71 VNTL-KDGRRVVILMDLEVVKSAGEVGVKIGNPVPYNEGHA--QQQAVSAPASAATPPAS 127
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPAARLAMT----------RRVHPLVSLNPYQGNWTIK 190
KP+ + + + G P + A T +V P+ SL PYQ WTI
Sbjct: 128 KPQPQNGSLGVGSTVAKAYGASKPFGKPAGTGLLQPTSGTQSKVVPIASLTPYQSKWTIC 187
Query: 191 VRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISR 250
RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVYY S+
Sbjct: 188 ARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSK 246
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
GTL++ANKQF V+NDYEM N + V + +P +F+F I +L + LV
Sbjct: 247 GTLKIANKQFSAVKNDYEMTFNNETSV-LPCEDGHHLPTVQFDFTGIGDL-ESKSKDSLV 304
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
DIIG+ ++ I KSNN V KR+I + D + + VT +LW E A +
Sbjct: 305 DIIGICKSYEDATKITVKSNNREVAKRNICLMDMSGKVVTATLWGEDADKF------DGS 358
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
+ P++AIK +V DF G SLS L STVLV+PD+PEA KL+ W+ G G
Sbjct: 359 RQPVMAIKGARVSDFGGRSLSVLSSSTVLVNPDIPEAYKLRGWHYVFGDG 408
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 414 YESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
++SEG+ G S++ + SG + +++Y + + N GD K +FS A
Sbjct: 473 FDSEGQALDGVSISDLRSGGTGGSNTNWKTLYEAK------SENLGQGD-KADYFSTVAT 525
Query: 471 ISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
+ ++ + M Y+AC T CNKKV D Y CE C + R I+ + D
Sbjct: 526 VVFLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQEN 584
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLG------DDNSYQMKLKEVTWVPHLLRVSVAQ 582
W++ F E AE I+G + L ELK ++G ++ +++ + + R+ V
Sbjct: 585 QWVTCFQESAEAILGQNTVYLGELKEKVGCVFVSMNEQAFEEVFQNANFRSFTFRIRVKL 644
Query: 583 QEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ YN+E R + TV V PVD+ SK L+ I K +
Sbjct: 645 ETYNDESRIKATVIDVKPVDYRDYSKRLIMNIRKNI 680
>gi|403360589|gb|EJY79974.1| Replication protein A 70 kDa DNA-binding subunit [Oxytricha
trifallax]
Length = 733
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 215/418 (51%), Gaps = 30/418 (7%)
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNAR--GE---GC 210
+ Q G AP + P+ +L+ +W IK R+T K MR Y R GE G
Sbjct: 203 KTQEGQFAPDYF-----QFTPISALSQNSQDWRIKARITKKYEMRQYTQTRRNGEKFPGK 257
Query: 211 VFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN 270
+ N++L D G QI T FN+ A +F + + KVY IS G ++++N++F ++N++ +
Sbjct: 258 ILNIDLIDGHGAQIMGTFFNDTATRFDSKIKENKVYTISGGQIKLSNQKFTAIKNEFCLI 317
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN 330
++SE +EAV++ + I F+FV I ++ + + G + +D IG+ Q P + KS
Sbjct: 318 FTDHSEFKEAVDDES-IQSVAFSFVSIQDI-KNMYGNKTIDFIGIAQYCQPVKEKQLKSG 375
Query: 331 NEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISL 390
+ +R + +ADE+ +T+ + +W +LA + D+ P++A+K + +F G SL
Sbjct: 376 TK--AQRTVYLADESNQTIALCIWGDLANQFDLSI----DEHPVIAVKRANLSEFGGRSL 429
Query: 391 STLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG--SGLGSLAKNGARSMYSDRVSL 448
++ S V+V+P P ++LK W+ + ++SI G + + ++ L
Sbjct: 430 NSNEDSQVIVNPSHPRTQQLKHWFNHLADPSQLSSITVQKEKGEFPEEKKSFNFDNQRFL 489
Query: 449 THITSNPSLGDEKPV------FFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGY 500
I GD+ V +F + AYI ++K D +Y AC C +KV + G+
Sbjct: 490 GEIMEALYSGDKSIVDQSLASYFYVSAYIWILKNDDRTYYLACPNDDCKRKVIEE-SVGW 548
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD 558
C+ C + + C Y++ A++ D S +I+ + +E I+G AD+L E+K Q GD
Sbjct: 549 RCQSCDRTYQTCIPTYMLSAKLADASDAQFINFYKQEGTLIMGLPADKLKEIKDQ-GD 605
>gi|428166243|gb|EKX35222.1| replication protein A1, 70kDa, partial [Guillardia theta CCMP2712]
Length = 439
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 231/449 (51%), Gaps = 22/449 (4%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAAR 234
P+ ++PY G+ +K ++ SK ++R +K + VF+ + D D + ++ T +NE
Sbjct: 2 PIAMIHPY-GSCNVKAKLISKEDVRRFKGRNNTDMAVFSAVVLD-DSSDMKVTFWNEQCE 59
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
K++D +G+ Y S+G+ +VA ++ + YEM ++ N+ +E + E A PQ +
Sbjct: 60 KYHDSLVVGQWYVFSKGSFKVAQSKYNNTKCQYEMTVSTNTTIERCLEEDA--PQVCISL 117
Query: 295 VPIDELGRYVNGTEL--VDIIGVVQNVSPTMSI---RRKSNNEMVPKRDITVADETKRTV 349
I+ V L VD+IGVVQ V I + + + + KR++++ D++ +TV
Sbjct: 118 YMIEVNCLLVEKGNLQNVDVIGVVQEVEALGEITIKQGRDSGKQKSKRNVSLVDKSGKTV 177
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
+++LW+ A Q +A I+A++ +V D+ G SLSTL S + ++P+ PEAK
Sbjct: 178 SITLWDNHAE---QFDTSHATNHSILAVRGARVSDYNGCSLSTLRSSMLQINPETPEAKD 234
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNG--ARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
L+ WY S G S +G G + G A + VS + SN S D F+I
Sbjct: 235 LREWYSSCDSGKSFQPVGEGTQAGKGPGGPAPRKLIEAVSKESLGSNTSKAD----IFTI 290
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
KAY++ ++ W NKK A G + E + C RYI D +G
Sbjct: 291 KAYVTYSNTEK-QWQYPANPENKKKVVASGDVWIDESTGTQIDTCQRRYITTFAFMDLTG 349
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W++ F+E A+ I+G SADEL E+ + D +++ K + ++++V +EY
Sbjct: 350 RQWLTCFDEHAQLILGKSADELYEI--ECTDKVAFEGVWKAAYFKEYMIKVRAKAEEYKG 407
Query: 588 EKRQRVTVRAVAPVDFAAESKFLLEEISK 616
E R + +V ++ PV++ +ES+ L+ EI +
Sbjct: 408 ETRTKFSVMSLEPVNYVSESQHLISEIRR 436
>gi|47227767|emb|CAG08930.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 210/408 (51%), Gaps = 39/408 (9%)
Query: 41 RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCE 100
RY SDG+ L + + S + +I N + I +L + I + +I+ + +
Sbjct: 13 RYRVMMSDGRHTLSSFMLSTQLNYLIEENTLAQNCICVLKRHVTNILKDGRRVVIILEID 72
Query: 101 VVSPALEMEIKIEVKSDESGIIFK------PKQEDEVKKDGPGIVLKPKQEMVAKSAAQI 154
V+ A E+ KI + + +++ P + +E +G L P +
Sbjct: 73 VIKRAEEVAGKIGDPTPYTEAVWEVTVSNLPFRSNESTANGTKPRLSPSLTPPEQKRKGF 132
Query: 155 LRD--QNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
+D + G A + +V P+ SLNPYQ WTI+ R+T+K ++RT+ NARGEG +F
Sbjct: 133 SKDFGKKGPSAMPSTPGGGSKVVPIASLNPYQSKWTIRARITNKSSIRTWSNARGEGKLF 192
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
++E+ DE G +I+ T FN+ KF+ ++GKVYYIS+ TL++ANKQ+ +V+NDYEM LN
Sbjct: 193 SMEMVDESG-EIRTTGFNQEVDKFFSLIEVGKVYYISKCTLKIANKQYTSVKNDYEMTLN 251
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
S + ++ +P + +FV I +L +VD+IGV ++V + +SN E
Sbjct: 252 GESTIIPC-EDSCDVPLVQCDFVSISDL-ENKEKDAIVDVIGVCKSVDEATRLTTRSNRE 309
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVG-------------------------QELLD 367
V KR + + D + + VTV+LW E V L +
Sbjct: 310 -VSKRTLHLMDMSGKLVTVTLWGEEVRTVRGTSVRRSFTLLNIRMKTATRFPGRMNRLAE 368
Query: 368 NADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
N D S P+VAIK K+ DF G SLS ST++++PD+PEA KL+ W
Sbjct: 369 NFDGSGEPVVAIKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGW 416
>gi|124505339|ref|XP_001351411.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
gi|6562734|emb|CAB62873.1| replication factor a protein, putative [Plasmodium falciparum 3D7]
Length = 1145
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 245/493 (49%), Gaps = 60/493 (12%)
Query: 147 VAKSAAQILRDQ-----NGNMAPAARLAMTRR----VHPLVSLNPYQGNWTIKVRVTSKG 197
+ K +IL+D+ N + P A+ + + + L+ Y W IK RV SK
Sbjct: 647 IMKKDEKILKDKTLNRNNRKITPYQSNAVIKMNDGILMQINKLSQYSSKWIIKARVQSKD 706
Query: 198 NMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVAN 257
N+R Y + EG VFN+EL DEDG +I+A F +A K++D ++GK+Y IS+G ++VAN
Sbjct: 707 NIRRYTSGSKEGKVFNIELCDEDG-EIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVAN 765
Query: 258 KQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQ 317
K+F T+ +DYE+ L+ENS +E E IP+ +NF+ ID + + +N VDII VV
Sbjct: 766 KKFNTLNHDYEITLDENSLIEILDEENENIPKYNYNFISIDNI-KNMNTGSFVDIIAVVL 824
Query: 318 NVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ-ELLDNADKSPIVA 376
N M I K + KRD+T+ DE+ T+ V+LW + AT + + L DN IV
Sbjct: 825 NYQEKMQIFVKKTGQYKDKRDVTLIDESFDTIQVTLWEKNATIIDEMNLRDNC----IVC 880
Query: 377 IKSLKVGDFQGISLSTLGRSTVLVSPD-LPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
K LK+G++QG L + R+ + ++PD + +A LK+W+ K M L S
Sbjct: 881 FKYLKIGEWQGKKLESHARTKIEINPDNIEKAYILKNWWIHNKK---MICNSINLSSNYI 937
Query: 436 NGARSMYSDRVSLTHITSNPSLGDE-----KPVFFSIKAYISLIKPDQAMWYRACKTCNK 490
N + ++ I N +L +E K + F+ +I I + + Y AC CNK
Sbjct: 938 NIET-----QKTIQEIKKNVNLVNEEALSGKGIMFTTYGFIDQIYNNMPV-YSACPDCNK 991
Query: 491 KV-------------TDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE 537
K+ ++ L +C C KN+ YI + ++ D + S F
Sbjct: 992 KMISNSVDDNEYEPSSNLLEETMYCAKCNKNNIPVYNYYINL-KITDSTDSIRASAFANC 1050
Query: 538 AERII-GCSADELNELKSQLGDDNSYQMK--------LKEVTWVPHLLRVSVAQQEYNNE 588
A+ I+ G SA+E +L+ + Y M+ ++++ R+ V + +E
Sbjct: 1051 AKIIMNGLSAEEYMKLRQE------YIMQENIENFDIIEKIKLNEFFFRIKVYMTSHMDE 1104
Query: 589 KRQRVTVRAVAPV 601
++ T+ +APV
Sbjct: 1105 LKKNYTIIDIAPV 1117
>gi|145353884|ref|XP_001421229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581466|gb|ABO99522.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 650
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 169/676 (25%), Positives = 300/676 (44%), Gaps = 87/676 (12%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL---------TGNRYMFNASDGKK 51
M ++P+AIS IL S D IV QV DLK R+ ASDG
Sbjct: 1 MPPALTPNAISNILEQTH--GSQDFKPIV-QVFDLKELKTKPDADDAAKRFRVLASDGGF 57
Query: 52 RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV--------- 102
+ + + L++ G I ++RL +Y +N++ + LIV EV+
Sbjct: 58 AAQGLFGAELNAMCERGEITKFTVLRLREYIVNDL--NGRRILIVMDAEVMDRYDAVIGQ 115
Query: 103 ------------------------------SPALEMEIKIEVKSDESGIIFKPKQEDEVK 132
+PA ++E + + + +P
Sbjct: 116 PRVWQPGTGTNASTGMNAGGMQQQRNAYGGAPAAQVEGYGSGGGNGANLATEP------- 168
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVR 192
P + Q RD AR R + P+ +LNPYQ WTI+ R
Sbjct: 169 ---PRASGGGYGGGAPAAQGQYRRDGGA----VARNEQPRSITPIHALNPYQNRWTIRAR 221
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
+T+ +R+Y NA+GEG V ++ D DGT+I+ FN+ A + + G VY IS+G
Sbjct: 222 ITTPLELRSYSNAKGEGKVLGFQVLDADGTEIKCVCFNDTAVRLAGELRQGLVYEISKGA 281
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
+ V + + YE+ L+ ++ + I + + F + EL +N ++VD+
Sbjct: 282 I-VTPRDPRYAIYQYEIKLDNHATFVPCPDAERDIKKMVYKFKKLSELDA-LNAGDMVDV 339
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL--LDNAD 370
IG+ +V +I ++ +E KR + + D++ ++ +LW+ + +G ++ L +
Sbjct: 340 IGIAYSVGDLTTIMKRDGSE-TSKRSVMIRDDSDTSIEFTLWDPHSVEIGGQIESLIASG 398
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+ P++A+KS ++G+FQG ++ T+ + V ++PD EA +++ W++ G + S+
Sbjct: 399 EKPVIAVKSSRLGEFQGKNMGTVSSTMVEINPDSSEATRMRVWFDQGGADKTFNSLSGSG 458
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK-PDQAMWYRAC---- 485
G K + V I +E + S I IK + +Y AC
Sbjct: 459 GGGGKGSGELLSFSTVK--EIGEELVAKNEGVAYLSCCGIIKHIKLGAEGNFYPACPLLN 516
Query: 486 --KTCNKKVTDALGSGYW-CE-GCQKNDEECSLRYIMVARVC-DGSGEAWISIFNEEAER 540
+TC KK+ +G W CE + E RY M + VC D S E W+S+F ++ ++
Sbjct: 517 GERTCQKKLRKDDSTGEWKCERHAGEKIEAADWRY-MFSMVCMDHSDEYWVSVFGDKGDK 575
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
I G SA E+ E+ + + Y+ + + + + LRV VA Y + R + ++ +
Sbjct: 576 IFGISAAEMKEIYDR--EPERYENMISDALFNDYSLRVKVAVDNYTDVPRAKGSLVEIER 633
Query: 601 VDFAAESKFLLEEISK 616
V++ SK L+ +I+K
Sbjct: 634 VNYVDMSKKLIGKIAK 649
>gi|145353961|ref|XP_001421265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581502|gb|ABO99558.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 649
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 169/676 (25%), Positives = 300/676 (44%), Gaps = 87/676 (12%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL---------TGNRYMFNASDGKK 51
M ++P+AIS IL S D IV QV DLK R+ ASDG
Sbjct: 1 MPPALTPNAISNILEQTH--GSQDFKPIV-QVFDLKELKTKPDADDAAKRFRVLASDGGF 57
Query: 52 RLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV--------- 102
+ + + L++ G I ++RL +Y +N++ + LIV EV+
Sbjct: 58 AAQGLFGAELNAMCERGEITKFTVLRLREYIVNDL--NGRRILIVMDAEVMDRYDAVIGQ 115
Query: 103 ------------------------------SPALEMEIKIEVKSDESGIIFKPKQEDEVK 132
+PA ++E + + + +P
Sbjct: 116 PRVWQPGTGTNASTGMNAGGMQQQRNAYGGAPAAQVEGYGSGGGNGANLATEP------- 168
Query: 133 KDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVR 192
P + Q RD AR R + P+ +LNPYQ WTI+ R
Sbjct: 169 ---PRASGGGYGGGAPAAQGQYRRDGGA----VARNEQPRSITPIHALNPYQNRWTIRAR 221
Query: 193 VTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGT 252
+T+ +R+Y NA+GEG V ++ D DGT+I+ FN+ A + + G VY IS+G
Sbjct: 222 ITTPLELRSYSNAKGEGKVLGFQVLDADGTEIKCVCFNDTAVRLAGELRQGLVYEISKGA 281
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
+ V + + YE+ L+ ++ + I + + F + EL +N ++VD+
Sbjct: 282 I-VTPRDPRYAIYQYEIKLDNHATFVPCPDAERDIKKMVYKFKKLSELDA-LNAGDMVDV 339
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL--LDNAD 370
IG+ +V +I ++ +E KR + + D++ ++ +LW+ + +G ++ L +
Sbjct: 340 IGIAYSVGDLTTIMKRDGSE-TSKRSVMIRDDSDTSIEFTLWDPHSVEIGGQIESLIASG 398
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL 430
+ P++A+KS ++G+FQG ++ T+ + V ++PD EA +++ W++ G + S+
Sbjct: 399 EKPVIAVKSSRLGEFQGKNMGTVSSTMVEINPDSSEATRMRVWFDQGGADKTFNSLSGSG 458
Query: 431 GSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK-PDQAMWYRAC---- 485
G K + V I +E + S I IK + +Y AC
Sbjct: 459 GGGGKGSGELLSFSTVK--EIGEELVAKNEGVAYLSCCGIIKHIKLGAEGNFYPACPLLN 516
Query: 486 --KTCNKKVTDALGSGYW-CE-GCQKNDEECSLRYIMVARVC-DGSGEAWISIFNEEAER 540
+TC KK+ +G W CE + E RY M + VC D S E W+S+F ++ ++
Sbjct: 517 GERTCQKKLRKDDSTGEWKCERHAGEKIEAADWRY-MFSMVCMDHSDEYWVSVFGDKGDK 575
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
I G SA E+ E+ + + Y+ + + + + LRV VA Y + R + ++ +
Sbjct: 576 IFGISAAEMKEIYDR--EPERYENMISDALFNDYSLRVKVAVDNYTDVPRAKGSLVEIER 633
Query: 601 VDFAAESKFLLEEISK 616
V++ SK L+ +I+K
Sbjct: 634 VNYVDMSKKLIGKIAK 649
>gi|156089527|ref|XP_001612170.1| replication factor-a protein 1 (rpa1) family protein [Babesia
bovis]
gi|154799424|gb|EDO08602.1| replication factor-a protein 1 (rpa1) family protein [Babesia
bovis]
Length = 684
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 226/430 (52%), Gaps = 29/430 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ L Y W+I+ RV +K +++ + N GEG +F+V+L D G I+AT+F EA K+
Sbjct: 247 IADLTIYTPKWSIRARVLNKTHIKKFNNQWGEGQLFSVDLCDNSG-DIRATLFGEAVTKW 305
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
Y+ + G+VY IS G LR ANK+F ++ + EM+L+ENS++ ++ + IP + NFVP
Sbjct: 306 YNFIEEGQVYSISGGQLRPANKKFNSLSHACEMSLDENSQILLDRDDQS-IPLIRCNFVP 364
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I ++ R +G +++D+IGVV + S + KS KR+I + D + +V V+LWN+
Sbjct: 365 IKQVERLSSG-DIIDVIGVVARFNDIKSYQSKSTGTTSDKREILLCDSSGSSVWVTLWNK 423
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
V Q L + PI+A+K ++V ++QG L T+G + + ++P +PE KLK+W+ +
Sbjct: 424 ---KVQQFLTSELETHPIIAMKGVRVNEWQGKKLDTIGTTHITINPAVPEVAKLKNWWAT 480
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP-------SLGDEKPVFFSIKA 469
EG S +G S+ N D +S+ +T +LGD + F+ +
Sbjct: 481 EG---SQMQFDAGRSSIDNN-----IEDIISIGALTQAANQAYQFKALGDSG-ITFTARG 531
Query: 470 YISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
+ +I+ + W AC C +K+ + LG + C C K + YI+ ++ D +G
Sbjct: 532 MVEVIRENTFSW-PACIECQRKMVNELGQ-WVCSRC-KCTRQPRHTYILSMKISDDTGHL 588
Query: 530 WISIFNEEAERII-GCSADELNELKSQLG---DDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
W + + + I+ G A E+ L D ++ +E ++ ++ V + Y
Sbjct: 589 WATASSIVGDEIMNGIPAAEVLALAGNNDINVDGKNFMNIFEEARLTEYIFKIKVYTETY 648
Query: 586 NNEKRQRVTV 595
+E R + V
Sbjct: 649 MDEPRIKYRV 658
>gi|412986814|emb|CCO15240.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 238/463 (51%), Gaps = 33/463 (7%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
PL +LNPYQ W++ VRVT+ +RT+ NA+GEG V ++ D +G++++ F + A
Sbjct: 143 PLQALNPYQQGWSVCVRVTTPIEVRTWHNAKGEGKVLGFDVVDAEGSEMKVVCFGDCALN 202
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE---EAVNETAFIPQTKF 292
++ Q VY IS+ TL A++ + YEM L+ N+ V+ E IP+ ++
Sbjct: 203 LAEKMQQYGVYEISKATL-TASRNPRYAIGAYEMKLDHNTVVQPLPENAQGAMKIPKVQY 261
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSP-TMSIRRKSNNEMVPKRDITVADETKRTVTV 351
NF I E+ + T +D++GVV VSP +M + R + KR I + D++ V +
Sbjct: 262 NFRNIKEIETLMKDTS-IDVMGVVHEVSPISMQMLRTGGEKA--KRSIKLRDDSSAEVEL 318
Query: 352 SLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKK 409
+LW E A +GQ+L + ++ PI+A K VG+F G +LS + + V+PD P+A +
Sbjct: 319 TLWGEHADGLGQKLETMLFENQHPILACKRACVGEFNGKNLSIRNNTVMDVNPDHPKAGQ 378
Query: 410 LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR-VSLTHITSNPSLGDEKPVFFSI- 467
L+SWY++ GK + + + GA DR ++ I + + G F+ +
Sbjct: 379 LRSWYDAGGKTEDVQVLSG---GMGGAGAVGGRGDRFATIRQIENEAANGGCSNAFWVVC 435
Query: 468 KAYISLIK-PDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDE----ECSLRY 516
+ I+ I D Y AC + C KK+ +G W C+++ + RY
Sbjct: 436 RGSITYIHNSDNGPMYPACPMDHDGRKCQKKMRQNEMNGMW--ECERHYDTVIPSVDWRY 493
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
+ ++ D SG S+F E E++ G A + L D ++++ K ++ W +
Sbjct: 494 LCTVKLADYSGAVMASVFGEVGEKLFGMPAPDFKHLLDT--DFHAFEKKRDDIRWREYKF 551
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPV---DFAAESKFLLEEISK 616
++ V + YN+ R + T+++V P+ +FA ESK L+E++ K
Sbjct: 552 KLKVNEDTYNDMTRVKYTIQSVEPICDGNFADESKVLIEKLKK 594
>gi|403359819|gb|EJY79566.1| hypothetical protein OXYTRI_23155 [Oxytricha trifallax]
Length = 1367
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 219/412 (53%), Gaps = 24/412 (5%)
Query: 153 QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
Q +++Q+ N A L T P+ +L+ + +W IK R+ K +T+KN R EG +
Sbjct: 248 QAMKNQSSNQA-GDDLVFT----PIKALSTFHYDWRIKARIIKKYEKKTWKNQRNEGSLM 302
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
N++L D GTQIQAT F +A KF D + G +Y S G +++AN++F +++ND+ + +
Sbjct: 303 NIDLMDSFGTQIQATFFRDALIKFGDMIKEGHIYLFSNGQVKLANQKFTSIKNDFCLVFD 362
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
+ ++++E ++T+ I Q +NFV + ++ + +++VDII V+ N + ++ K+
Sbjct: 363 KQADIKEVPDDTS-INQNGYNFVTVKDI-LTMEKSKVVDIIAVIINPGNLIELQTKAGQN 420
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
V KR IT+AD++ +V V W E A+ D + + +VA++ ++V DFQG L+
Sbjct: 421 KV-KRLITIADDSYMSVNVCFWTESASK-----FDLLEGNHVVALRGVRVVDFQGKQLNF 474
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS-------DR 445
+ ++ D P +LK W+E+ + SI K + + ++
Sbjct: 475 GDDAQMIKDFDHPRTYQLKKWFENLNSNDIIRSINKSDKESPKKASNKDSTQLVAELLEQ 534
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCE 503
++L N K FF+I I+ I+ D + Y AC +TCN+KV + + Y CE
Sbjct: 535 LNLNEPEQNSYAKSNK--FFTINCNIAYIRNDDKVLYLACPEETCNRKVIEEQPNVYKCE 592
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
C + + C Y+++ ++ D S +++ + E +I+ SA+E+ LK +
Sbjct: 593 FCNRTYDRCVPTYMLMVKLQDQSDSIYVNFYRELGSQIMAASANEIKRLKDE 644
>gi|403350046|gb|EJY74468.1| hypothetical protein OXYTRI_04276 [Oxytricha trifallax]
Length = 1442
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 219/412 (53%), Gaps = 24/412 (5%)
Query: 153 QILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
Q +++Q+ N A L T P+ +L+ + +W IK R+ K +T+KN R EG +
Sbjct: 248 QAMKNQSSNQA-GDDLVFT----PIKALSTFHYDWRIKARIIKKYEKKTWKNQRNEGSLM 302
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
N++L D GTQIQAT F +A KF D + G +Y S G +++AN++F +++ND+ + +
Sbjct: 303 NIDLMDSFGTQIQATFFRDALIKFGDMIKEGHIYLFSNGQVKLANQKFTSIKNDFCLVFD 362
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
+ ++++E ++T+ I Q +NFV + ++ + +++VDII V+ N + ++ K+
Sbjct: 363 KQADIKEVPDDTS-INQNGYNFVTVKDI-LTMEKSKVVDIIAVIINPGNLIELQTKAGQN 420
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST 392
V KR IT+AD++ +V V W E A+ D + + +VA++ ++V DFQG L+
Sbjct: 421 KV-KRLITIADDSYMSVNVCFWTESASK-----FDLLEGNHVVALRGVRVVDFQGKQLNF 474
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS-------DR 445
+ ++ D P +LK W+E+ + SI K + + ++
Sbjct: 475 GDDAQMIKDFDHPRTYQLKKWFENLNSNDIIRSINKSDKESPKKASNKDSTQLVAELLEQ 534
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCE 503
++L N K FF+I I+ I+ D + Y AC +TCN+KV + + Y CE
Sbjct: 535 LNLNEPEQNSYAKSNK--FFTINCNIAYIRNDDKVLYLACPEETCNRKVIEEQPNVYKCE 592
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
C + + C Y+++ ++ D S +++ + E +I+ SA+E+ LK +
Sbjct: 593 FCNRTYDRCVPTYMLMVKLQDQSDSIYVNFYRELGSQIMAASANEIKRLKDE 644
>gi|384497733|gb|EIE88224.1| hypothetical protein RO3G_12935 [Rhizopus delemar RA 99-880]
Length = 409
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 217/422 (51%), Gaps = 22/422 (5%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLT----GNRYMFNASDGKKRLKAI 56
M + +S AI I + S+ P +VQV+++K RY SDG ++A+
Sbjct: 1 MLQQLSAGAIKAIYYEEKSNPLSNNP--IVQVINIKAVPVNGSTRYRAIVSDGINFMQAM 58
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKS 116
L + ++ V G I+ +IR+ +Y N + K K LI+ ++++ +E ++ V
Sbjct: 59 LATQHTALVEQGQIKRNSIIRINEYVCNLLSNK--KVLIILSIDIMTTDVEAKVGTPVSL 116
Query: 117 D-ESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQ----ILRDQNGNMAPAARLAMT 171
D SG KP + A Q +G + +
Sbjct: 117 DPTSGSAANTPNTPTAAATSTTSQPKPSEPARAPEQRQPTFNSTNSSSGGYFSGVNMQLE 176
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
+ P+ ++NPYQ WTIK RVT K ++ + N++G+G +F+V D+ G +I+AT FN+
Sbjct: 177 SSLTPIKNINPYQSRWTIKARVTLKSPIKQWHNSKGDGKLFSVNFLDQSG-EIKATAFND 235
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
+ Y+ F+ G VYY+S+ + +A KQF T+ N+YE+ L +E+E ++ A IPQ
Sbjct: 236 QVDRLYNMFEEGNVYYLSKARVTMARKQFSTLDNEYELTLEAGTEIELCPSDAA-IPQMN 294
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F V I +L G VD +GVV S I K+ + KR++T+ DE+ ++V +
Sbjct: 295 FKLVKIGDLDSVEKGAT-VDAMGVVIQDSGLNEIVTKATGKPTNKRELTIVDESGKSVRL 353
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
+LW++ A E D++D SPIVA + L+V DF G SLS T+ +PD+PEA++L+
Sbjct: 354 TLWDKTA-----EEFDSSD-SPIVACRGLRVSDFNGRSLSLSSAGTLKKNPDIPEAQRLR 407
Query: 412 SW 413
W
Sbjct: 408 QW 409
>gi|237839391|ref|XP_002368993.1| hypothetical protein TGME49_036080 [Toxoplasma gondii ME49]
gi|211966657|gb|EEB01853.1| hypothetical protein TGME49_036080 [Toxoplasma gondii ME49]
gi|221483366|gb|EEE21685.1| replication factor, putative [Toxoplasma gondii GT1]
Length = 458
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 215/433 (49%), Gaps = 16/433 (3%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
PL L Y WTI+ RV KG++R Y ARG G +FNVEL D+DG +I+AT FN A K
Sbjct: 8 PLKDLTAYVAKWTIRARVDVKGDIRKYNGARGPGQLFNVELKDKDG-EIRATFFNAAVDK 66
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+Y+ Q GKVYY G+++ N +F ++DYE+ +E S + EA + ++ + V
Sbjct: 67 WYNILQEGKVYYFRGGSVKPKNPRFNHTRHDYELTFDEKSSIVEAESGADIPSISRADLV 126
Query: 296 PIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I + + VN T V +I +V + P SI KS + PKRD+ + DE R++ ++LW
Sbjct: 127 DIRGIEEKEVNST--VSLIAIVHDYRPIQSITIKSTGQQKPKRDVFLVDEGGRSLVLTLW 184
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
E + +E L + P+V +KS+KVGD+ G L + G + V + PD A +++ W+
Sbjct: 185 GEKTETLPEEQL---CQKPLVLLKSVKVGDWNGRKLDSQGNTRVELFPDGNRAAEVQDWW 241
Query: 415 ESEG--KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
EG +G+ + G GL K +S+ + L D K V+ + A +
Sbjct: 242 NQEGSRRGSFASLSGGGLAVGRKEILKSLEQVAQEAAQAEAA-VLSD-KGVYATSCALLE 299
Query: 473 LIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
I D+ W AC C KK+ + + + C C+K E+ + Y++ + D +G S
Sbjct: 300 RIGDDRFSW-PACPDCRKKMNEEMPRCWQCPSCRKQCEQPNHTYMLNLSLMDLTGSLRCS 358
Query: 533 IFNEEAERIIGCSADE----LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
E+AE + + E L E ++ S+Q + + R+ + +E
Sbjct: 359 CIGEKAEEFMANTKAETVLLLAEHRALDEQGRSFQDIFADANLEEWIFRICSKYDSWMDE 418
Query: 589 KRQRVTVRAVAPV 601
+ V A AP+
Sbjct: 419 VSIKQRVVAAAPL 431
>gi|221507849|gb|EEE33436.1| replication factor, putative [Toxoplasma gondii VEG]
Length = 458
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 215/433 (49%), Gaps = 16/433 (3%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
PL L Y WTI+ RV KG++R Y ARG G +FNVEL D+DG +I+AT FN A K
Sbjct: 8 PLKDLTAYVAKWTIRARVDVKGDIRKYNGARGPGQLFNVELKDKDG-EIRATFFNAAVDK 66
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+Y+ Q GKVYY G+++ N +F ++DYE+ +E S + EA + ++ + V
Sbjct: 67 WYNILQEGKVYYFRGGSVKPKNPRFNHTRHDYELTFDEKSSIVEAESGADIPSISRADLV 126
Query: 296 PIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I + + VN T V +I +V + P SI KS + PKRD+ + DE R++ ++LW
Sbjct: 127 DIRGIEEKEVNST--VSLIAIVHDYRPIQSITIKSTGQQKPKRDVFLVDEGGRSLVLTLW 184
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
E + +E L + P+V +KS+KVGD+ G L + G + V + PD A +++ W+
Sbjct: 185 GEKTETLPEEQL---CQKPLVLLKSVKVGDWNGRKLDSQGSTRVELFPDGNRAAEVQDWW 241
Query: 415 ESEG--KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
EG +G+ + G GL K +S+ + L D K V+ + A +
Sbjct: 242 NQEGSRRGSFASLSGGGLAVGRKEILKSLEQVAQEAAQAEAA-VLSD-KGVYATSCALLE 299
Query: 473 LIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
I D+ W AC C KK+ + + + C C+K E+ + Y++ + D +G S
Sbjct: 300 RIGDDRFSW-PACPDCRKKMNEEMPRCWQCPSCRKQCEQPNHTYMLNLSLMDLTGSLRCS 358
Query: 533 IFNEEAERIIGCSADE----LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
E+AE + + E L E ++ S+Q + + R+ + +E
Sbjct: 359 CIGEKAEEFMANTKAETVLLLAEHRALDEQGRSFQDIFADANLEEWIFRICSKYDSWMDE 418
Query: 589 KRQRVTVRAVAPV 601
+ V A AP+
Sbjct: 419 VSIKQRVVAAAPL 431
>gi|221052666|ref|XP_002261056.1| replication factor a related protein [Plasmodium knowlesi strain H]
gi|194247060|emb|CAQ38244.1| replication factor a related protein [Plasmodium knowlesi strain H]
Length = 1191
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 237/461 (51%), Gaps = 44/461 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L+ Y W IK RV K +R Y + EG VFN+EL DEDG +I+ F +A K+YD
Sbjct: 719 LSQYSSKWIIKARVQFKDVVRKYYSGNKEGKVFNIELCDEDG-EIKVNFFGKAVDKWYDY 777
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
QLGK+Y IS+G ++ ANK+F T+++DYE+ L+ENS + EA+ E IP+ +NF I+
Sbjct: 778 LQLGKIYKISKGYIKAANKKFTTIKHDYEITLDENS-IIEALEENDNIPKFIYNFTSIEN 836
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+ G+ LVD+IGVV + + I K + KRDI + D++K T+ V+LW + A
Sbjct: 837 IKNLKVGS-LVDVIGVVFSYQESTQILIKKTGQYKEKRDIILIDDSKETINVTLWGDHAL 895
Query: 360 NVGQELL-DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
N+ + L DN+ I+ K+LKVG++QGI L + ++ + ++P++ A+ L++W+ +
Sbjct: 896 NIEEGYLKDNS----IICFKNLKVGEWQGIKLESHPKTKIDINPEIDRAQMLQTWWRNNK 951
Query: 419 KG-TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-----KPVFFSIKAYIS 472
+ S +IGSG+ + + ++ I + +L +E K + F+ +I
Sbjct: 952 QNLYSSVNIGSGIFHMEL---------QKTIEEIKKDVNLANEDALSGKGIIFTTFGFID 1002
Query: 473 LIKPDQAMWYRACKTCNKKVT--------DALGS------GYWCEGCQKNDEECSLRYIM 518
I + Y AC CNKK+ D + S +C C KN+ + Y +
Sbjct: 1003 HIYNSMPV-YSACPDCNKKMISNVVEEEEDDMNSPQMMDQSMYCSKCNKNNTP-TYSYFI 1060
Query: 519 VARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQ-LGDDNSYQMKLKEVTWV-PHL 575
++ D + + F A I+ G SA+E L+ + + +N L E +
Sbjct: 1061 NLKITDSTDSLRATAFAGCARTIMNGLSANEFMALRQEYVTQENIENFDLIEKAKLNEFF 1120
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVD--FAAESKFLLEEI 614
R+ + +E +++ T+ + P++ K+L+ I
Sbjct: 1121 FRIKAYMTSHMDELKKKYTIVDIVPLNKLLVDNCKYLIRSI 1161
>gi|356551666|ref|XP_003544195.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Glycine max]
Length = 424
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 173/329 (52%), Gaps = 19/329 (5%)
Query: 211 VFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN 270
VF+ ++ D DG +I+ T FN A +FY+ + GKVY ISRG++++A K F + ND E+
Sbjct: 96 VFSFDVVDSDGGEIRPTCFNAVADQFYNVIEAGKVYLISRGSIKLAQKNFNHLHNDQELT 155
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN 330
L+ S ++ +++ I FN+ PI E+ N +VD+IGVV ++ PT SI RK N
Sbjct: 156 LDVASIIQPFLDDNDSITSHTFNYCPISEIESLENN-NIVDVIGVVTSIRPTTSIMRK-N 213
Query: 331 NEMVPKRDITVADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVGDFQGI 388
V KR + + D + R+V ++LW G+ L + +A + PI+A K++++ DF G
Sbjct: 214 GTKVQKRTLXLKDMSGRSVELTLWGNFCIVEGKRLQTICHAGEFPILATKAVRLNDFNGK 273
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL 448
S+ T+ S + V D EA LK W+E+EGK SI + + ++ K R S
Sbjct: 274 SVGTIATSQLYVEADFLEACTLKRWFENEGKSVPTLSISTEMSNMGKTDVRKTISQ---- 329
Query: 449 THITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW 501
+ LG EKP S+ +S IK D Y C + CNKKVT+ +
Sbjct: 330 ---IKDEKLGTSEKPDRISVFVVVSHIKVDN-FCYPGCPLKIGDRQCNKKVTNNADGTWH 385
Query: 502 CEGCQKNDEECSLRYIMVARVCDGSGEAW 530
CE C + C RY++ ++ D + W
Sbjct: 386 CERCNQPISACDFRYLLSMQIQDHTSITW 414
>gi|354507912|ref|XP_003515998.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cricetulus griseus]
Length = 218
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 141/227 (62%), Gaps = 9/227 (3%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
WTI RVT+K +RT+ N+RGEG +F++EL DE G +I+AT FNE KF+ ++ KVY
Sbjct: 1 WTICARVTNKSQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNEQVDKFFPLIEVNKVY 59
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
Y S+GTL++ANKQF V+NDYEM N + V + +P +F+F I +L +
Sbjct: 60 YFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPC-EDGHHLPTVQFDFTGISDL-ESKSK 117
Query: 307 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 366
LVDIIG+ ++ + I KS+N V KR+I + D + + VT +LW E A
Sbjct: 118 DSLVDIIGICKSYEDSTKITVKSSNREVAKRNIYLMDMSGKVVTATLWGEDADKF----- 172
Query: 367 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
+ + P++AIK +V DF G SLS L ST++V+PD+PEA KL+ W
Sbjct: 173 -DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGW 218
>gi|401410388|ref|XP_003884642.1| hypothetical protein NCLIV_050400 [Neospora caninum Liverpool]
gi|325119060|emb|CBZ54612.1| hypothetical protein NCLIV_050400 [Neospora caninum Liverpool]
Length = 919
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 218/435 (50%), Gaps = 19/435 (4%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
PL L Y WTI+ RV KG++R Y ARG G +FNVEL D+DG +I+AT FN A K
Sbjct: 468 PLKDLTAYVAKWTIRARVDVKGDIRKYNGARGPGQLFNVELKDKDG-EIRATFFNSAVDK 526
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ-TKFNF 294
+Y+ Q GKVYY G ++ N +F ++DYE+ +E S + EA A IP ++ +
Sbjct: 527 WYNVLQEGKVYYFRGGLVKPKNPRFNHTRHDYELTFDEKSSIVEA-EPGADIPSISRADL 585
Query: 295 VPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
V I + + VN T V +I +V + P SI KS + PKRD+ + DE R++ ++L
Sbjct: 586 VDIRGIEEKEVNST--VSLIAIVHDYRPIQSITIKSTGQQKPKRDVFLVDEGGRSLALTL 643
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
W + + ++ L + PIV KS+KVGD+ G L + G + + + PD + +L+ W
Sbjct: 644 WGDKTETIPEDQL---SQKPIVLFKSVKVGDWNGKKLDSQGNTRIELFPDGNRSAELQDW 700
Query: 414 YESEG-KGTSMASIGSGLGSLA--KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
+ EG + S ASI G G K +S+ + S+ +K V+ + A
Sbjct: 701 WNREGSQRGSFASISGGGGLGVGRKEILKSLEQVAQEAAQAEA--SVLSDKGVYATSCAL 758
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
+ I D+ W AC C KK+++ + + C C+K E+ + Y++ + D +G
Sbjct: 759 LERIGDDRFSW-PACPDCRKKMSEEVTGCWQCPSCRKQCEQPNHTYMLNMSLMDLTGSLR 817
Query: 531 ISIFNEEAERIIGCSADE----LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
S E+AE +G + E L E ++ S+Q + + R+ +
Sbjct: 818 CSCMGEKAEEFMGNTKAETVLLLAEHRALDEQGRSFQDIFADANLEEWIFRICSKYDSWM 877
Query: 587 NEKRQRVTVRAVAPV 601
+E + V A AP+
Sbjct: 878 DEVSIKQRVVAAAPL 892
>gi|390367630|ref|XP_003731293.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Strongylocentrotus purpuratus]
Length = 575
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 266/594 (44%), Gaps = 85/594 (14%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+RY SDG+ A+L + L+ V +G + K ++L +Y+ N I + ++V
Sbjct: 42 DRYRLMLSDGEHTCTAMLATQLNEMVSTGELDVKAAMKLKNYSCNPI-ANDRRVIVVLDL 100
Query: 100 EVVSPALEMEIKI----EVKSDESGIIFKPKQE----DEVKKDGPGIVLKPKQEMVAKSA 151
++V E+ + I +++ G P Q+ D P +P +
Sbjct: 101 DIVKKGSEIGVSIGDPTPMRAPGQGGGPAPAQQQSRPDSTVSHDPPQTARPTSYGTGAAP 160
Query: 152 AQILRDQNGNMAPAARLAM------TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNA 205
A ++ G + AM ++V P+ SL P Y+N
Sbjct: 161 ASATPNKQGTFYGQSNSAMGGSTTSPKKVQPISSLTP-------------------YQN- 200
Query: 206 RGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQN 265
R G + N VY++SRGTL+ AN+Q+ ++ N
Sbjct: 201 RPLGHLPN-----------------------------NIVYFVSRGTLKPANRQYTSINN 231
Query: 266 DYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSI 325
DYE+ N ++ VE V E IP +F+F I L + ++D+IGV ++ S ++
Sbjct: 232 DYELTFNNDTMVEPCVEEDVSIPAVQFDFKSISHLEDTPEDS-MIDVIGVCKSTSDLTAV 290
Query: 326 RRKSNNEMVPKRDITVADETKRTVTVSLWNE-LATNVGQELLDNADKSPIVAIKSLKVGD 384
KS+N V KR + + D+++ NE LA+N + + +P++A+K ++
Sbjct: 291 TIKSSNREVNKRSLQLVDDSQ--------NEPLASNSAEAEDFDGSGNPVIAVKGARLSG 342
Query: 385 FQGISLSTLGRSTVLVSPDLPEAKKLKSW-YESEGKGTSMASIGSGLGSLAKNGARSMYS 443
F G SLS L S V+PD+P+A LK W + SI + GS GA + +
Sbjct: 343 FGGRSLSVLQNSIFQVNPDIPKAHHLKGWCLTARVTPQDSQSISTRQGSGGGGGANTNW- 401
Query: 444 DRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGY 500
H +LG EKP +F++K I ++ + M Y AC + CNKKV++ Y
Sbjct: 402 ---MTFHDVHAQNLGQGEKPDYFTVKGTILFVRKENCM-YMACPSAECNKKVSENGDGSY 457
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDN 560
CE C K+ E R ++ A V D + W + F E AE+++ SA EL LK Q ++
Sbjct: 458 RCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQETAEQLLLKSAQELGSLKDQ--NEK 515
Query: 561 SYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ ++ ++ ++ R+ + + YN E R + T + P++ + L+++I
Sbjct: 516 EFNQVFQDACFIDYMFRMRIKMETYNEEARLKCTCVSAQPINVRDYTNKLIKDI 569
>gi|154288368|ref|XP_001544979.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408620|gb|EDN04161.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 549
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 172/615 (27%), Positives = 277/615 (45%), Gaps = 90/615 (14%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS I E VVQ + +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSKPKIAEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLATQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG + +RL + N + K ++ LI+ EV+ E KI D +
Sbjct: 68 HYVTSGQLVRGCFVRLKSFQANMV--KGKRILIILDLEVLDRLGICEKKI---GDPQPLD 122
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
K +++D+ I S Q AA + ++P+ +L+P
Sbjct: 123 AKQEEQDKT------IPTTISSNGFYGSRGPQQPPQQPAQRSAAAASAHANIYPIEALSP 176
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y F+
Sbjct: 177 YSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLDDSG-EIRATAFKDQCDSLYSVFEE 235
Query: 243 GKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
G VYYIS +++A K F + N+YE+ +++ VE+A E +PQ +FNF I L
Sbjct: 236 GCVYYISSPCRVQMAKKAFNNLNNEYELTFEKDTVVEKA-EEQNDVPQIRFNFTNIANLQ 294
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
GT +D+IGV+++V I K+ ++ KRD+T+ D T +V +++W N+
Sbjct: 295 SVEAGT-TIDVIGVLKDVGELSQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWG----NI 349
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
+E D+ +S +VA K +KV DF G SLS L ++ V D+ +A KLK + +
Sbjct: 350 AKE-FDSVPES-VVAFKGVKVSDFNGRSLSLLSSGSMTVDLDIEDAHKLKGCHCGLCQAD 407
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMW 481
+MA YS LT + L DE
Sbjct: 408 TMA-----------------YS--ACLTDKCNKKVLQDE--------------------- 427
Query: 482 YRACKTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
+G W CE C ++ RYI+ VCD +G W+S F+E +
Sbjct: 428 ----------------NGQWRCERCDQSFPHPEYRYILSVNVCDHTGALWLSCFDEVGKI 471
Query: 541 IIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAP 600
I+G SA+EL ELK D+ +Y+ ++ + +++R R V +V+
Sbjct: 472 ILGTSANELMELKE--NDERAYEELVQRANCRSWNFNCRAKMDNFQDQQRVRYQVSSVSA 529
Query: 601 VDFAAESKFLLEEIS 615
+D++ ES L E I+
Sbjct: 530 IDYSVESTRLAELIN 544
>gi|403340896|gb|EJY69743.1| Replication protein A 70 kDa DNA-binding subunit, putative
[Oxytricha trifallax]
Length = 636
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 231/458 (50%), Gaps = 25/458 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +L+ + +W IK RV K + +KN++GEG + N+EL D GTQIQAT F ++A +
Sbjct: 171 PIKALSTFNYDWRIKARVVKKHEKKLWKNSKGEGWIMNIELMDCFGTQIQATFFKDSAER 230
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F + G +Y S G++++AN ++ ++ND+ + ++N+++ E ++ + I + FNF+
Sbjct: 231 FDQIIKEGNIYLFSNGSVKLANHKYTQIRNDFTLVFDKNADIVEVPDDLS-IQEKGFNFL 289
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I ++ V +++DIIG++ + P ++ K+ + KR +T+ADE++ + + LW
Sbjct: 290 GIKDIMT-VEKNKIIDIIGILHQIGPLQEVQTKAGHNK-EKRMLTLADESEMIIQLCLWG 347
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
++A +++D + ++AIK KV D+ G L+ + +++ P ++L++WY+
Sbjct: 348 DMAHRF--DMMDETCSNHVIAIKGGKVVDYAGKQLNIHEDAYIMLDIPHPRTEQLRAWYD 405
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL---------------THITSNPSLGDE 460
+ + +I N A++ + V + + + N +
Sbjct: 406 NLQNKDVLKNIVVKKERTENNQAQNKQQENVRMIAEVLDYLNQASQDQSKMGFNQNNNGN 465
Query: 461 KPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT-DALGSGYWCEGCQKNDEECSLRYI 517
+F + IS IK D ++Y AC + C KKV D + CE C ++ + C Y+
Sbjct: 466 VFAYFWVNCQISFIKKDDKLYYLACPEENCRKKVIEDTDSKTFRCESCNQSFQSCVPTYM 525
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
++AR+ D S +++ + E+ +I+ + + +K + ++ + + + + P+ +
Sbjct: 526 LMARIIDQSDSIFVNFYREQGSQIMSVPPEVIRRIKEEEQEEQLNDIFI-DAQFKPYQIL 584
Query: 578 VSVAQQEYNNE-KRQRVTVRAVAPVDFAAESKFLLEEI 614
+ Q Y + R + + E+K +L +
Sbjct: 585 IKAKQSNYGQDSSRTSFFATKIQQFSYQTENKEILRRL 622
>gi|403364199|gb|EJY81856.1| Replication protein A 70 kDa DNAbinding subunit puta [Oxytricha
trifallax]
Length = 636
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 231/458 (50%), Gaps = 25/458 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +L+ + +W IK RV K + +KN++GEG + N+EL D GTQIQAT F ++A +
Sbjct: 171 PIKALSTFNYDWRIKARVVKKHEKKLWKNSKGEGWIMNIELMDCFGTQIQATFFKDSAER 230
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F + G +Y S G++++AN ++ ++ND+ + ++N+++ E ++ + I + FNF+
Sbjct: 231 FDQIIKEGNIYLFSNGSVKLANHKYTQIRNDFTLVFDKNADIVEVPDDLS-IQEKGFNFL 289
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I ++ V +++DIIG++ + P ++ K+ + KR +T+ADE++ + + LW
Sbjct: 290 GIKDIMT-VEKNKIIDIIGILHQIGPLQEVQTKAGHNK-EKRMLTLADESEMIIQLCLWG 347
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
++A +++D + ++AIK KV D+ G L+ + +++ P ++L++WY+
Sbjct: 348 DMAHRF--DMMDETCSNHVIAIKGGKVVDYAGKQLNIHEDAYIMLDIPHPRTEQLRAWYD 405
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL---------------THITSNPSLGDE 460
+ + +I N A++ + V + + + N +
Sbjct: 406 NLQNKDVLKNIVVKKERTENNQAQNKQQENVRMIAEVLDYLNQASQDQSKMGFNQNNNGN 465
Query: 461 KPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT-DALGSGYWCEGCQKNDEECSLRYI 517
+F + IS IK D ++Y AC + C KKV D + CE C ++ + C Y+
Sbjct: 466 VFAYFWVNCQISFIKKDDKLYYLACPEENCRKKVIEDTDSKTFRCESCNQSFQSCVPTYM 525
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
++AR+ D S +++ + E+ +I+ + + +K + ++ + + + + P+ +
Sbjct: 526 LMARIIDQSDSIFVNFYREQGSQIMSVPPEVIRRIKEEEQEEQLNDIFI-DAQFKPYQIL 584
Query: 578 VSVAQQEYNNE-KRQRVTVRAVAPVDFAAESKFLLEEI 614
+ Q Y + R + + E+K +L +
Sbjct: 585 IKAKQSNYGQDSSRTSFFATKIQQFSYQTENKEILRRL 622
>gi|402592315|gb|EJW86244.1| hypothetical protein WUBG_02846 [Wuchereria bancrofti]
Length = 613
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 237/467 (50%), Gaps = 32/467 (6%)
Query: 163 APAARLA--MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
+ + RLA + + + P+ + PY W I VT+K ++R + R + VFN ELTDE+
Sbjct: 164 SSSRRLANLVGQNLTPIKLITPYVNKWRICGVVTAKEDLRNIRTVRRDMKVFNFELTDEE 223
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G I+ F++ A +FY Q G ++Y+S GT++ ANK+F T +DYE+ + +SEV
Sbjct: 224 GGCIRIAAFDDVAEEFYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRSDSEVSPC 283
Query: 281 VN-ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++ E P+ + V + + +V E +DII +V+ V+ M + ++ + KRDI
Sbjct: 284 LDREKIEQPKLSLSIVRLCNVANHVG--ESIDIIAIVEKVNDIMQVTARNTGTQLEKRDI 341
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTV 398
+ D ++ +T++ W E A L D + + IK V +F G +SLST S +
Sbjct: 342 VLIDTSETEITLTFWGEQA-----RLYDKEIEGQTIGIKGTFVKEFNGNLSLSTASSSRI 396
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
++ D E L WY E + + A + G A + R + + ++ LG
Sbjct: 397 ELNMDCAETASLYKWYR-ETRPSVQARNLTTTGLTADSYGRDL-----RIIRLSEFCGLG 450
Query: 459 --DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSL 514
EK F+I A IS +K D A+ Y++C T C KKV + + + Y CE C ++
Sbjct: 451 RDSEKGTLFNITAMISSLKADGAL-YKSCGTNGCKKKVIE-INNQYRCEKCDITLDKYKY 508
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD--NSYQMKLKEVTWV 572
+M + D SG W+++F ++A +++ A++L +L L +D + Y V +
Sbjct: 509 VLLMTMEISDFSGSHWVTVFEDKAVKLLKSDAEQLGQL---LDNDLLDEYNEVFNAVRFR 565
Query: 573 PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
+ R+ + YN E++ + +V + V+ K+ ++E+++ VS
Sbjct: 566 EYTFRIRAKSEFYNGEEKIKWSVFDINEVN---HDKY-IDELTRAVS 608
>gi|170580146|ref|XP_001895135.1| replication factor A 73 kDa subunit [Brugia malayi]
gi|158598024|gb|EDP36015.1| replication factor A 73 kDa subunit, putative [Brugia malayi]
Length = 613
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 236/469 (50%), Gaps = 36/469 (7%)
Query: 163 APAARLA--MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
+ + RLA + + + P+ + PY W I VT+K ++R + R + VFN ELTDE+
Sbjct: 164 SSSRRLANLVGQNLTPIKLITPYVNKWRICGVVTAKEDLRNIRTVRRDMKVFNFELTDEE 223
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G I+ F++ A +FY Q G ++Y+S GT++ ANK+F T +DYE+ + +SEV
Sbjct: 224 GGCIRIAAFDDVAEEFYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRSDSEVSPC 283
Query: 281 VN-ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++ E P+ + V + + +V E VDII +V+ V+ M + ++ + KRDI
Sbjct: 284 LDREKIEQPKLSLSIVRLCNVANHVG--ESVDIIAIVEKVNDIMQVTARNTGAQLEKRDI 341
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTV 398
+ D ++ +T++ W E A QE+ + + IK V +F G +SLST S +
Sbjct: 342 VLIDASETEITLTFWGEQARLYDQEI-----EGQTIGIKGAFVKEFNGSLSLSTGNSSRI 396
Query: 399 LVSPDLPEAKKLKSWY-ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
++ + E L WY E+ + +GL + Y + + ++ L
Sbjct: 397 ELNMECAETANLYKWYRETRPSIQARNLTTTGLTT-------DSYGRDLRIICLSEFCGL 449
Query: 458 G--DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECS 513
G EK FF+I A IS +K D A+ Y++C T C KKV + + + Y CE C ++
Sbjct: 450 GRDSEKGTFFNITAMISSLKADGAL-YKSCGTNGCKKKVIE-INNQYRCEKCDITLDKYK 507
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDN---SYQMKLKEVT 570
+M + D SG W+++F ++A +++ A++L QL D+N Y V
Sbjct: 508 YVLLMTMEISDFSGSHWVTVFEDKAVKLLKTDAEQL----GQLLDNNLLDEYNEVFNAVR 563
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
+ + R+ + YN E++ + +V + V++ ++E+++ VS
Sbjct: 564 FREYTFRIRAKSEFYNGEEKNKWSVFDINEVNYDK----YIDELTRAVS 608
>gi|389582205|dbj|GAB64760.1| replication factor a protein [Plasmodium cynomolgi strain B]
Length = 1187
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 227/460 (49%), Gaps = 42/460 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L+ Y W IK RV SK N+R + + EG VFN+EL DEDG +I+A F +A K+YD
Sbjct: 738 LSQYSSKWIIKARVQSKDNVRRFYSGNKEGKVFNIELCDEDG-EIKANFFGKAVDKWYDY 796
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
Q+GK+Y IS+G ++ ANK+F T+++D E+ L+ENS + E + E IP+ +NF ID
Sbjct: 797 LQVGKIYKISKGNVKAANKKFNTLKHDCEITLDENS-IIELLEENDNIPKFIYNFASIDT 855
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+ + +N LVD+IGVV + TM I K + KRD+ + D++ T+ V+LW E A
Sbjct: 856 I-KNMNTGSLVDVIGVVFSFQETMQILIKKTGQYKEKRDLILIDDSNETINVTLWGEHAL 914
Query: 360 NVGQ-ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
+ + L DN+ I+ K LKVG++QG L + ++ + V+P++ L++W+ S
Sbjct: 915 KIEEVHLRDNS----IICFKYLKVGEWQGKKLESHPKTKIDVNPEIERTHVLQTWW-SSN 969
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-----KPVFFSIKAYISL 473
K +S+ S + ++ I + +L +E K + F+ +I
Sbjct: 970 KQNLYSSVNVNTNSFHIELQK-------TIEEIKKDVNLANEDALSGKGIVFTTFGFIDH 1022
Query: 474 IKPDQAMWYRACKTCNKKV--------------TDALGSGYWCEGCQKNDEECSLRYIMV 519
I + Y AC CNKK+ + + +C C KN+ Y +
Sbjct: 1023 IY-NSIPVYSACPDCNKKMITNVVEEEEDDINSSQMMDQSMYCAKCNKNNTPI-YNYSIN 1080
Query: 520 ARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQ-LGDDNSYQMKLKE-VTWVPHLL 576
++ D + S F A I+ G SADE L+ + + +N L E V
Sbjct: 1081 LKITDSTDSLRASAFAGCARTIMNGLSADEFMALRQEYVTQENIENFDLIEKVKLNEFFF 1140
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVD--FAAESKFLLEEI 614
R+ + +E ++ T+ + P++ K+L+ I
Sbjct: 1141 RIKAYMTSHMDELKKNYTIIEIIPLNKLLVDNCKYLIRSI 1180
>gi|68077039|ref|XP_680439.1| replication factor a protein [Plasmodium berghei strain ANKA]
gi|56501369|emb|CAI04746.1| replication factor a protein, putative [Plasmodium berghei]
Length = 1169
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 235/461 (50%), Gaps = 31/461 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+ Y W IK RV SK N+R + EG VFN+EL DE G +I+ +F +A K
Sbjct: 709 PINKLSQYSTKWIIKARVQSKDNIRKFYTGNKEGKVFNIELCDESG-EIKVNVFGKAVDK 767
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+YD ++GK+Y IS+G ++ ANK+F T+++D E+ L+ENS +E IP+ +NF
Sbjct: 768 WYDYLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFY 827
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PI+E+ +N LVD+IGVV + I K + K+D+ + DET T+ V+LW
Sbjct: 828 PINEIKANLNTGTLVDVIGVVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWG 887
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
E A + +E+ N ++ I+ K LKVG++QG L + ++ V ++P+L +A LK+W+
Sbjct: 888 ENAVKM-EEM--NITENCIICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLKNWWI 944
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-----KPVFFSIKAY 470
+ K ++ + + + + N ++ S + ++ I N +L +E K + F+ +
Sbjct: 945 NNKK--NVYNTINLTTTTSNNNMLNLESQK-TIQEIKKNVNLANEEVLSGKGIIFTTFGF 1001
Query: 471 ISLIKPDQAMWYRACKTCNKKVT------------DALGSGYWCEGCQKNDEECSLRYIM 518
I I + Y AC CNKK+ + +C C KN+ Y +
Sbjct: 1002 IDHIY-NAIPVYSACPNCNKKMVATVIEDGEEDMDQNVSESMYCAKCNKNNIPV-YNYSI 1059
Query: 519 VARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQ-LGDDNSYQMKLKEVTWV-PHL 575
++ D + +S F A+ I+ G SA+E +L+ + + +N L E +
Sbjct: 1060 NLKITDNTDSLRVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDLIEKAKLNEFF 1119
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVD--FAAESKFLLEEI 614
R+ + +E ++ T+ P+ ++L++EI
Sbjct: 1120 FRIKAYMTSHMDEIKKNYTILETIPLSKLLVDSCRYLIKEI 1160
>gi|156094579|ref|XP_001613326.1| replication factor a protein [Plasmodium vivax Sal-1]
gi|148802200|gb|EDL43599.1| replication factor a protein, putative [Plasmodium vivax]
Length = 1141
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 205/398 (51%), Gaps = 38/398 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L+ Y W IK RV SK N+R + + EG VFN+EL DEDG +I+A F +A ++YD
Sbjct: 692 LSQYSSKWIIKARVQSKDNVRRFYSGNKEGKVFNIELCDEDG-EIKANFFGKAVDRWYDY 750
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
Q+G++Y IS+G ++ ANK+F T+++D E+ L+ENS + E + E IP+ +NF ID
Sbjct: 751 LQVGRIYKISKGNIKAANKKFNTLKHDCEITLDENS-IIELLEENDNIPKFIYNFASIDT 809
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+ + +N LVD+IGVV + TM I K + KRD+ + D++ T+ V+LW E A
Sbjct: 810 I-KNMNTGSLVDVIGVVFSFQETMQILIKKTGQYKEKRDLILIDDSNETINVTLWGEHAL 868
Query: 360 NVGQELL-DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
V ++ L DN+ I+ K LKVG++QG L + ++ + V+P++ A L++W+ S
Sbjct: 869 KVEEDCLRDNS----IICFKYLKVGEWQGKKLESHPKTKIDVNPEIDRAYVLQTWWSSNK 924
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-----KPVFFSIKAYISL 473
+ S+ N + + ++ I + +L +E K + F+ +I
Sbjct: 925 QNL--------YHSVNVNTSSFHIELQKTIEEIKKDVNLANEDALSGKGIVFTTFGFIDH 976
Query: 474 IKPDQAMWYRACKTCNKKV--------------TDALGSGYWCEGCQKNDEECSLRYIMV 519
I + Y AC CNKK+ + + +C C KN+ Y +
Sbjct: 977 IY-NSIPVYSACPDCNKKMITNVVEEEEDDISSSQMMDQSMYCAKCNKNNTPV-YNYSIN 1034
Query: 520 ARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQL 556
++ D + S F A I+ G SADE L+ +
Sbjct: 1035 LKITDSTDSLRASAFAGCARTIMNGLSADEFMALRQEY 1072
>gi|294929957|ref|XP_002779439.1| replication protein A 70kDa, putative [Perkinsus marinus ATCC
50983]
gi|239888547|gb|EER11234.1| replication protein A 70kDa, putative [Perkinsus marinus ATCC
50983]
Length = 788
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 250/469 (53%), Gaps = 47/469 (10%)
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
P + + + P+ L+ Y WTIK RV+SK ++RT+ NARGEG +F++EL D+
Sbjct: 306 GPVSYRPVASDIIPISQLSVYSQKWTIKGRVSSKSDVRTFVNARGEGQLFSIELVDDQNG 365
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+AT FN A KFY Q G+VY S+G ++ AN +F YE+ N+++ +EEA N
Sbjct: 366 EIRATFFNSAVTKFYPAIQQGRVYTFSKGQVKQANARFNP-GAAYELTFNDDAIIEEA-N 423
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
++A IP+ + I + + N E VD+ G++ + +P +I ++ + +R+ T+
Sbjct: 424 DSADIPRILYKISKIATI-QDRNADEFVDLCGIITHCAPISTIVVRNTGQERARRNFTIV 482
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D++ ++ +++W E A N G + + P+V IK+ ++ ++ G SL+T +T+ V P
Sbjct: 483 DDSGCSIEMTVWGETAQNCGVD-ENRVQYHPVVMIKNARISNYGGKSLTTASTTTLEVDP 541
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARS----MYSDR---VSLTHITSNP 455
D A ++K+W+ G+ ++ ++ SG G N ++ M D +SL+ S+
Sbjct: 542 DDSRAFEVKNWWLQGGQTGAVQALSSGGGGAGGNAPKTVIDVMRMDNNLYLSLSGQASS- 600
Query: 456 SLGDEKPVFFS--IKAYISLI--KPDQAMWYRACKT-----------CNKKVTDALGSGY 500
+ + +PV +A ++ I D+ ++Y +C T C+KKV + +G
Sbjct: 601 DVPNSRPVNTHNIPRATVAQIYKSNDKPLYYTSCITEIPDGRGGIRKCSKKVEQDISTGT 660
Query: 501 W-C-EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGD 558
W C EG Q + +C RYI+ ++ D SGE + F+E+A+ ++G SA ++ + +G+
Sbjct: 661 WSCIEGHQ--NPQCMPRYIISIKLADISGEVMVRAFDEQAQALLGVSAQ---DMMNGMGE 715
Query: 559 D------NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPV 601
D N+ Q K V R+ ++ Y +E+R V++ P+
Sbjct: 716 DEIETLINNTQFKKINV-------RLRSKKEVYTDEERVNVSMTDFTPI 757
>gi|335748585|gb|AEH58813.1| replication protein A large subunit [Karenia brevis]
Length = 460
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 241/475 (50%), Gaps = 45/475 (9%)
Query: 168 LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
+A + P+ ++PY WTIK RVTSK +RT+ + G+ VF+V+L D G +I++T
Sbjct: 1 MAAVDQFFPISEISPYHTKWTIKARVTSKAPVRTFGKSGGK--VFSVDLLDALGGEIRST 58
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
FN+AA KF D + G + S+G +R+A++++ + + YE+ + ++ +E A +E I
Sbjct: 59 FFNQAADKFLDVLKPGACFTFSKGRVRIADRRYTALNHRYELIFDADAIIEPAKDEGT-I 117
Query: 288 PQTKFNFVPIDELGRYVNGTEL---VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
KFN + R + L VD+ GVV V P M++R K E++ KRDIT+AD+
Sbjct: 118 EALKFNITSL----RAIQSKTLPCGVDLCGVVTAVRPLMTVRNKEGQELL-KRDITIADD 172
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV-SPD 403
T ++TV+LW E A + + P+V +K + V ++ G +L S LV P
Sbjct: 173 TATSMTVTLWAERAKQEDRVF----EGYPVVGVKGVTVKEWNGGRGGSLLASGALVFKPT 228
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPV 463
EAK+++ W+ SEG G+S + + G R+ + +L + ++P
Sbjct: 229 FEEAKRVQQWW-SEG-GSSQTLLDISQTTGGDGGGRNRNAAAATLAGVRQAADRLTDQPE 286
Query: 464 FFSIKAYISLIKPD-----QAMWYRACKT--------CNKKVTDALGSGYWCEGCQKNDE 510
FS+ A +++++ Q + Y AC+ CN++V SG+ C C +
Sbjct: 287 IFSVAARLAIVQMRKQGEVQPLQYLACQEPRENSSLPCNRRVDS---SGF-CSFCNRAG- 341
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNS----YQMKL 566
+ + R + R D +AW++ F+E A+R++G SA+++ ++ GD+ + + KL
Sbjct: 342 KVAARLNIRCRFVDFEDQAWMTTFHEAAQRVLGMSAEDVRAMEQGTGDEMADGEDRREKL 401
Query: 567 KEVTWV-----PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ P L V YN E R +TV P+ + +L+EI++
Sbjct: 402 EAAVRARYFEKPLSLVVRAKLDTYNGEVRPNITVVDARPISRGEHGRVMLKEINQ 456
>gi|403221677|dbj|BAM39809.1| replication factor-A protein 1 [Theileria orientalis strain
Shintoku]
Length = 659
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 285/600 (47%), Gaps = 71/600 (11%)
Query: 27 EIVVQVLDLK---LTGNRYMFNASDG------KKRLKAILPSNLSSEVISGNIQNKGLIR 77
++ V++L L+ + N+Y+ DG K A++P + G+ Q G +
Sbjct: 34 QVPVKLLCLEQSCIADNKYLIETIDGTVPYAYKHTCLALVPPS-----PDGDRQLIG--K 86
Query: 78 LLDYALNEIPTKSEKYLIV-TKCEVVS-----------PALEMEIKIEVKSDESGIIFK- 124
++ + +I +YL+V T+ VV P L + ++ DES +K
Sbjct: 87 IISFNQYKIARTRSRYLVVLTRISVVPGDYRHLIGNLIPTLVYHPGLGIEQDES---YKS 143
Query: 125 PKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHP--LVSLNP 182
PK+E+ K+ GP KQE V +S I + P + + P + L
Sbjct: 144 PKKEENTKESGP----VRKQENV-RSVKTI----SNPYEPPKNVKKKLEIPPTKISDLTL 194
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQL 242
Y W I+ RV K ++R + N RGE +F+V+L D +G +I+AT F E+ K+Y +
Sbjct: 195 YTPKWLIRARVAYKSDIRKFNNQRGESQLFSVDLCDSNG-EIRATFFGESVNKWYTFLEE 253
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
G+VY IS G L+ ANK+F ++++ E+ L+E+ ++ N+ IP F+F P+D++
Sbjct: 254 GQVYSISGGQLKPANKKFNSLRHSCELVLDEHCHIQLFQNDDT-IPSFCFSFTPLDQIQN 312
Query: 303 YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
G E +D+IGVV +++ KS + + KRD + D TK ++ ++ W N
Sbjct: 313 LKVG-EQIDVIGVVVTAKDLQTVQVKSTGKALEKRDFLICDSTKSSIWLTSWGPKIRNFN 371
Query: 363 QELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
E D P+V +K +KV ++QG L +G + V+ P + EA +L+ W+ +E T
Sbjct: 372 YE---GPDSHPLVCLKGVKVIEWQGKKLDVMGSTQVIFEPVIQEALELRKWW-NENSHTL 427
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITS--NPSLG----DEKPVFFSIKAYISLIKP 476
+ GS +K +++ SL I S N +L D + F+ +A I ++K
Sbjct: 428 NFGTETSRGSSSK-----VFNQMSSLAEIISATNQALQFKSIDSNGMIFTTRALIEVLK- 481
Query: 477 DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN- 535
D + +C C K++ + G++C C+ + Y++ ++ D + W++
Sbjct: 482 DGTFSWPSCPGCRKRMNN--DDGWYCPRCENRGTPTHM-YMLTLKIVDETSHMWVTAMTD 538
Query: 536 --EEAERIIGCSADELNELKSQLGDDNS---YQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
E+ + I+G A L +L G D + + +EV ++ ++ + + +E R
Sbjct: 539 VGEDVQSIMGTKAYNLVKLMENGGTDETGKNFANYFEEVRLTEYVFKIKATVENFMDEPR 598
>gi|393910914|gb|EFO18545.2| replication factor A 73 kDa subunit [Loa loa]
Length = 612
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 219/434 (50%), Gaps = 22/434 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ + PY W I VT+K ++R + AR + VFN ELTDE+G I+ F++ A K
Sbjct: 178 PIKLITPYVNKWRICGVVTAKEDLRNIRTARRDMKVFNFELTDEEGGCIRIAAFDDVAEK 237
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNF 294
FY Q G ++Y+S GT++ ANK+F T +DYE+ + +SEV ++ E P+ +
Sbjct: 238 FYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRNDSEVLPCLDREKIEQPKLSLSI 297
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
V + + +V E +D+I + + V+ + + ++ + KRDI + D ++ +T++ W
Sbjct: 298 VRLCNVANHVG--EPIDVIAIAEKVNDIVEVTARNTGAQLEKRDIILIDASETEITLTFW 355
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLKSW 413
E A +E+ + + IK V ++ G +SLS S + ++ D E L W
Sbjct: 356 GEQARTYDKEI-----EGQTIGIKGAFVKEYNGSLSLSIGNSSRIELNMDCAETANLYRW 410
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
Y E + + A + G + N AR R+S S EK +FF++ A IS
Sbjct: 411 YR-ETRPSVQARNLTTAGLSSDNYARDFRIIRLSEVGALGRDS---EKGIFFNVTAMISS 466
Query: 474 IKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
+K D A+ Y++C T C KKV + L + Y CE C ++ +M + D SG W+
Sbjct: 467 LKADGAL-YKSCGTNGCKKKVIE-LNNQYRCEKCDITLDKYKYVLLMTVEISDFSGSHWV 524
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDD--NSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
++F ++A +++ A++L +L L +D + Y V + + R+ + YN E+
Sbjct: 525 TVFEDKAVKLLKNDAEQLGQL---LDNDLLDEYNEVFNAVRFREYTFRIRAKSEFYNGEE 581
Query: 590 RQRVTVRAVAPVDF 603
+ + V + V+
Sbjct: 582 KIKWNVFDIHEVNL 595
>gi|335748685|gb|AEH58815.1| replication protein A large subunit [Karenia brevis]
Length = 458
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 240/468 (51%), Gaps = 40/468 (8%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG---EGCVFNVELTDEDGTQIQA 226
M+ P+ L+ Y+ WTIK RVT+KG +RT+ N +G +G VF+VEL D +G +I+A
Sbjct: 2 MSGPFMPIAELSTYRTKWTIKGRVTNKGPLRTF-NKQGSATQGKVFHVELLDAEGGEIRA 60
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF 286
+ FN+AA + ++ + GK + +S+G +RVANKQ+ + YE+ + + +E A ++ A
Sbjct: 61 SFFNDAADRLFNVLEPGKCFTLSKGQIRVANKQYNPTSHRYELIFDREAIIEPATDD-AS 119
Query: 287 IPQTKFNFVPIDELGRYVNGTEL---VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
I KF+F + + V +L +DI GV+ + + S K E+ KR+I VAD
Sbjct: 120 INAIKFSFTNL----KAVASRQLPCSIDICGVITSFTAPASRTGKDGQELT-KREIQVAD 174
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS-TVLVSP 402
++ +++V+LW A + N + P VA+K + V ++QG +L +S T+ P
Sbjct: 175 DSGTSISVTLWGXRAKQEDK----NFEGQPTVALKGVLVKEWQGGRQGSLLQSGTLQFKP 230
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
+PEA++++ W+ G S A + G ++ ARS + +++ + + ++
Sbjct: 231 AMPEAQRVQQWWSQGGSAQSFADLSQTTGGGGES-ARSRNAKPMTIAGMRAAAERLLDQV 289
Query: 463 VFFSIKAYISLIKPD-----QAMWYRACK--------TCNKKVTDALGSGYWCEGCQKND 509
+++ ++L++ Q + Y AC+ CN++V DA G +C C +
Sbjct: 290 EIYNVVCRLALVQLRKQGEIQPLQYLACQEPKEGNGLPCNRRV-DASG---FCATCNRAG 345
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN--ELKSQLGDDNSYQMKLK 567
+ + R + R D +AW++ F+E A+RI+ + DE+ EL + G + ++
Sbjct: 346 -KTAPRLTVRCRFVDCEDQAWLTTFHEPAQRILDMTGDEVRALELLEEEGGREKLEASIR 404
Query: 568 EVTWV-PHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ + P + V YN E R +T PV + LL+EI
Sbjct: 405 QRYFATPFTVTVRAKMDSYNGEPRTNITAIEARPVSRGEHGRALLKEI 452
>gi|238502014|ref|XP_002382241.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
flavus NRRL3357]
gi|220692478|gb|EED48825.1| replication protein A 70 kDa DNA-binding subunit [Aspergillus
flavus NRRL3357]
Length = 375
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 195/376 (51%), Gaps = 19/376 (5%)
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
YD FQ G VYYIS +++A KQF + NDYE+ ++ VE+A ++ A +PQ +F+F
Sbjct: 2 LYDVFQEGSVYYISSPCGVKLAKKQFTNLNNDYELTFERDTVVEKAEDQ-ADVPQIRFSF 60
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
I +L + V +D+IGV++ V+ I K+ N+ KR++T+ D T +V +++W
Sbjct: 61 TTIGDL-QSVEKDTTIDVIGVLKEVAEVSQIMSKTTNKPYNKRELTLVDSTGFSVRLTVW 119
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
A N N ++A K +KV DF G SLS L ++ V PD+ EA KLK WY
Sbjct: 120 GSTALNF------NVTPESVIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHKLKGWY 173
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
+++G+ AS S G A + ++ + ++ +FS+KA + I
Sbjct: 174 DAQGRDGVFASHASMPGVAASTTKLEQFK---TVAQVKEEQLGMSDEVAYFSLKATVIYI 230
Query: 475 KPDQAMWYRAC--KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
K D M Y AC + CNKKVT+ L G W CE C K RYIM+ V D +G+ ++
Sbjct: 231 KQD-TMCYPACLSEGCNKKVTE-LDPGQWRCERCDKTHPRPEYRYIMLISVSDHTGQLYL 288
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
S F+E ++G SAD+L E++ DD + ++ R + +++R
Sbjct: 289 SCFDEVGRYMMGTSADQLMEIRQ--NDDKAAGDIFQDANCRTWNFRCRAKIDNFGDQQRI 346
Query: 592 RVTVRAVAPVDFAAES 607
R + PV+++ E+
Sbjct: 347 RCQIVTAKPVNYSEEA 362
>gi|320168096|gb|EFW44995.1| replication protein A [Capsaspora owczarzaki ATCC 30864]
Length = 688
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 235/485 (48%), Gaps = 85/485 (17%)
Query: 187 WTIKVRVTSKGNMRTYK------NARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
+ I+ RVT K +R + N + G V +++L D D ++I+AT FNE +
Sbjct: 228 FIIRARVTLKHPVREFARKNPGPNNQSGGRVCSIDLKD-DSSEIRATAFNEQIDTIINSL 286
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
++GK YY S+ +++ AN+ + T+ +DYE+ + ++ +E A +PQ +NFV D
Sbjct: 287 EVGKAYYFSKMSVKPANRMYNTLPSDYELTFEKGTQWVPCHDE-ANLPQVVYNFVRFD-- 343
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
G G + VD+IG+ ++ +I K + VPKR++T+ D+++R +TV+LWN ATN
Sbjct: 344 GLETLGEQTVDLIGICKSARDVQTITTK-QQKSVPKRELTLVDQSQREITVTLWNTQATN 402
Query: 361 VGQEL-LDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
+++ +DN ++A + +K+ DF G+ S S + S + V PD+PE ++L++W++SEG
Sbjct: 403 FDEQVAVDNR----VLAFRKVKLTDFSGVKSASCISSSAMEVEPDMPETQELRAWFDSEG 458
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKP-- 476
+ S + G G+ + G R D + I SN SLG +K + ++ ++ +K
Sbjct: 459 RNQSFQQVTGGAGAYS-GGNR----DLATFQQINSNHSLGADKAEYARLQGTVTFLKTKF 513
Query: 477 ---------DQAMWYRAC------------------------KTCNKKVTDALGSGYWCE 503
M+Y AC C KK L G C
Sbjct: 514 DDKSGSNDGSVGMYYYACGNIKQPIDNGQAAAPNSRQQAQQPSVCGKK----LAIGEQCP 569
Query: 504 GCQKNDEE---CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS-----ADELNEL--- 552
C + C+L ++ D +G WI+ F + A+ I+G S + L+EL
Sbjct: 570 TCGDVSQRISGCNLTFV----ADDSTGSQWITAFRDTAQTILGASNKDLTLEHLHELALN 625
Query: 553 --KSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ-QEYNNEKRQRVTVRAVAPVDFAAESKF 609
+ QL D+ Y L P+ + + + Q Q R R + +AP+DFA +S
Sbjct: 626 GEQEQL--DSIYAQALHH----PYEMTLRIKQEQSQQGGMRTRYQLVRLAPIDFARDSLR 679
Query: 610 LLEEI 614
L+ I
Sbjct: 680 LVRLI 684
>gi|391326773|ref|XP_003737886.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 393
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 217/400 (54%), Gaps = 34/400 (8%)
Query: 22 SSDIPEIVVQVLDLK-LTGNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLD 80
S +I + V+QV+DLK + +R+ DG ++ + S+ + I ++ L+++
Sbjct: 20 SVEIKDPVLQVVDLKPVKDSRFRAYLWDGVEQFNYGMISSQAIPPIKDKLKPNCLLKVNT 79
Query: 81 YALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVL 140
++L TK +I+ CEVV+ A ++ + +K DES Q+ E+ D
Sbjct: 80 FSLTV--TKDRPIIILMDCEVVALAEDVGQGL-LKVDES-------QKKELPTDP----- 124
Query: 141 KPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMR 200
KP AK++ + P + + P+ ++NP+Q TI+ RVT+KG ++
Sbjct: 125 KPDVSTPAKTS---------RVLPQGSPSTRANLFPISAVNPFQNRCTIRGRVTNKGEIK 175
Query: 201 TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQF 260
T++ A G+G +F+ E+ D+ G +I+ T FNE KFYD + KVYYIS + ANKQ+
Sbjct: 176 TWEKASGKGKLFSFEILDDSG-EIRVTGFNEQCDKFYDYIEPKKVYYISGFQCKAANKQW 234
Query: 261 KTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS 320
+T N+YE+ L + S VE +P+ ++FV I ++ + +++D+ G+++N
Sbjct: 235 RTTNNEYELTLGKFSNVELCTETCDDLPEQLYSFVAISDI-ETLPADQMIDVCGILKNAG 293
Query: 321 PTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL 380
+ RKS+ + + KRD + D++++ VT++LWN+ + + D D P++ I
Sbjct: 294 EPQTFNRKSDGKPLTKRDAFIVDDSRKVVTLTLWNDAISKI-----DRTD-HPVILISKA 347
Query: 381 KVGDFQ-GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
++ F G+S++T S V + PD+ AK+LK+W+ EG+
Sbjct: 348 RITSFNGGLSIATSAGSAVEIDPDIDRAKELKTWWAKEGE 387
>gi|356554165|ref|XP_003545419.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit-like [Glycine max]
Length = 450
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 175/334 (52%), Gaps = 24/334 (7%)
Query: 211 VFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN 270
VF+ ++ D DG +I+AT FN A +FY+ + GKVY IS+G+++ A K F + ND E+
Sbjct: 92 VFSFDVADFDGGEIRATCFNVVADQFYNVIEAGKVYLISKGSIKPAQKNFNHLHNDQELT 151
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV-----QNVSPTMSI 325
L+ S ++ +++ I FN+ PI E+ N + +VD+IGVV ++ PT SI
Sbjct: 152 LDVASIIQPFLDDNDSITSQTFNYXPISEIESLENNS-IVDVIGVVTLLDRTSIRPTTSI 210
Query: 326 RRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL--LDNADKSPIVAIKSLKVG 383
RK+ E V KR + + D + R+V ++LW GQ L + +A + P++A K++++
Sbjct: 211 MRKNGTE-VQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKAVRLN 269
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS 443
DF G + T+ S + V D PEA LK W+++E K SI L +L K R S
Sbjct: 270 DFNGKYVETIATSQLYVEADFPEACTLKRWFKNEEKSVPTLSISRELSNLGKTDVRKTIS 329
Query: 444 DRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDAL 496
+ LG EKP + S+ +S IK D Y C + CNKKVT+
Sbjct: 330 -------XIKDEKLGTSEKPDWISVFVVVSHIKVDN-FCYPGCLLKIGDRQCNKKVTNNA 381
Query: 497 GSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
CE C ++ + C RY++ ++ D + W
Sbjct: 382 DGTXHCERCNQSIDACDFRYLLSMQIXDHTSITW 415
>gi|429327218|gb|AFZ78978.1| replication factor-A protein 1, putative [Babesia equi]
Length = 646
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 254/559 (45%), Gaps = 73/559 (13%)
Query: 37 LTGNRYMFNASDG------KKRLKAILPSNLSSEVISGNIQNKG-LIRLLDYALNEIPTK 89
+ N+Y+ DG K A++P I G+ Q G +I Y + PTK
Sbjct: 47 IADNKYLIETLDGSVPVEFKHTCLALVPPT-----IDGDRQLVGKVISFTQYKIA--PTK 99
Query: 90 SEKYLIVTKCEVVS-----------PALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGI 138
S +++T+ ++ PAL K+ V D I +++ + GP
Sbjct: 100 SRYLIVLTRITIIPGDYRHLIGHLIPALVYHPKLAVPQDPQNIHDMKQEKLVMPSSGP-- 157
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
+ KP+++ A D + ++ + + L Y W I RV K
Sbjct: 158 IRKPQEQPRTVKAVSGPYDSSKGAGKKTDISPVK----ITDLTLYTPKWLIHARVVYKTE 213
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+R + N RGE +F+ +L D G +I+A F EA K+Y + G+VY IS G L+ ANK
Sbjct: 214 IRKFNNQRGESQLFSADLCDAHG-EIRAIFFGEAVTKWYSFLEEGQVYSISGGQLKPANK 272
Query: 259 QFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQN 318
+F +++ EM L+ENS ++ N+ IP F P+++L G E +D+IGVV
Sbjct: 273 RFNALKHSCEMILDENSHIQLFQNDDK-IPSICCTFTPLNQLDDIKIG-ESIDVIGVVVK 330
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
+ + SI++K ++ K+D+ + D T+ T+ ++LW + + +D P++ +K
Sbjct: 331 TNDSQSIQQKGTGNVIEKKDVFIVDSTRTTICLTLWGNKTQALNGK---GSDSHPVICLK 387
Query: 379 SLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGA 438
+KV +QG L G + + + P +PEA +L+ W+ + KG +
Sbjct: 388 GVKVNSWQGKKLDAQGSTQITIEPVIPEALELRKWW-TNVKGKRIID------------- 433
Query: 439 RSMYSDRVSLTHITS--NPSLG---------------DEKPVFFSIKAYISLIKPDQAMW 481
S +++ +L+HI S N +L D + F+ +A I +++ D +
Sbjct: 434 -SPFNELCTLSHIVSATNQALQFKCKFDTVLTLFLAIDSNGMVFTTRALIEILR-DNSFS 491
Query: 482 YRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERI 541
+ AC C K++ + G + C C + L Y++ ++ DG+ W++ F E I
Sbjct: 492 WPACPGCRKRMVNE-GDRWNCTRCNSSSSPIHL-YMLTLKIVDGTSHLWVTAFTGVGESI 549
Query: 542 I-GCSADELNELKSQLGDD 559
+ G A E L + G D
Sbjct: 550 MNGVKAFEAVTLAEKGGVD 568
>gi|242041189|ref|XP_002467989.1| hypothetical protein SORBIDRAFT_01g037705 [Sorghum bicolor]
gi|241921843|gb|EER94987.1| hypothetical protein SORBIDRAFT_01g037705 [Sorghum bicolor]
Length = 122
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 96/117 (82%)
Query: 439 RSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGS 498
+SMYSDR+ L+HITS+P++G EKPVFFS+ A IS IKP+Q MWYRACKTC KVT+A GS
Sbjct: 6 KSMYSDRIFLSHITSDPAMGQEKPVFFSLNAIISHIKPEQHMWYRACKTCCNKVTEAFGS 65
Query: 499 GYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
GYW E C KN ECSLRYIMV +V D +GEAW+S+FNE AE+IIG SADEL+ ++ +
Sbjct: 66 GYWSERCNKNASECSLRYIMVIKVSDPNGEAWVSVFNEHAEKIIGYSADELDRIRKE 122
>gi|440797647|gb|ELR18729.1| replication factora protein 1 (rpa1) subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 646
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 222/449 (49%), Gaps = 53/449 (11%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
LNPY WTI+V+VTSKG+++ Y+ ARG G + ++L D GT+I+A MFNEA KF
Sbjct: 244 LNPYLSRWTIRVKVTSKGDVKHYQTARGPGKLLAIDLMDVAGTEIRAVMFNEAVDKFESI 303
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
Q G VY I + TL+VANK+F + NDYE+ ++ S V EAV +T P +F P+ +
Sbjct: 304 IQQGNVYSIEKATLKVANKKFSHINNDYEITISPAS-VVEAVADT--FPGLVCHFAPLSD 360
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+ R +L++ I + KR + ++ + +V ++LW + A
Sbjct: 361 I-REKKADDLLNTID-------------------LEKRSLALSSR-EVSVELTLWGQAAA 399
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
+ D ++ +KS+KV ++Q + VL + + K +Y +
Sbjct: 400 SFEGSAGD------VLGLKSVKVSEWQ--------ETFVLCATE--RMKPAMGYYPGKSL 443
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRV--SLTHITSNPSLGDEKPVFFSIKAYISLIKPD 477
G + A S GS AR + ++ I + G F + A ++ IK D
Sbjct: 444 GATQA---SSYGSSRLFPARRKHKAEAVKTIQEIKALDVSGGS--AFVVVNATVAFIKYD 498
Query: 478 QA--MWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ +YR+C ++C +KV D +G Y CE C + + C RY+M R+ D + W ++
Sbjct: 499 ISGNTYYRSCPNESCARKVVD-VGGSYRCEMCNASYDHCQYRYVMSVRLIDHTDSLWATV 557
Query: 534 FNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN-EKRQR 592
FN+ ++G A E+ ++ D + + + L++ VA++ + N +KR R
Sbjct: 558 FNDVGATLLGVPASEVADICENRSDQRALEEVMNRGLLHKWRLKLRVAEESWGNFDKRIR 617
Query: 593 VTVRAVAPVDFAAESKFLLEEISKKVSHQ 621
T+ + P+++AA + + IS+ ++ Q
Sbjct: 618 ATIMSAEPLNYAASASDVTSSISRLLAQQ 646
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 39 GNRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTK 98
RY SDG+ + A+L S L+ V G + ++RLLD+A+ + K + +++
Sbjct: 57 ATRYRLTLSDGRHYMMALLASQLAHLVEGGTLATGSIVRLLDFAVTSVHDK--RLIVILN 114
Query: 99 CEVVSP 104
E+VSP
Sbjct: 115 LELVSP 120
>gi|17533299|ref|NP_495606.1| Protein RPA-1 [Caenorhabditis elegans]
gi|2833300|sp|Q19537.1|RFA1_CAEEL RecName: Full=Probable replication factor A 73 kDa subunit;
AltName: Full=RP-A p73; AltName: Full=Replication factor
A protein 1; Short=RF-A protein 1
gi|351018137|emb|CCD62042.1| Protein RPA-1 [Caenorhabditis elegans]
Length = 655
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 220/451 (48%), Gaps = 39/451 (8%)
Query: 164 PAARLA--MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY--KNARGEGCVFNVELTDE 219
PA R A R V P+ + PY N+ I V+ K +RT+ KN + VFN E+TD
Sbjct: 211 PARRTASNTERGVMPIAMVTPYVSNFKIHGMVSRKEEIRTFPAKNTK----VFNFEITDS 266
Query: 220 DGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
+G I+ T FNE A Y YY+S G+++ ANK+F +DYE+ L +S + E
Sbjct: 267 NGDTIRCTAFNEVAESLYTTITENLSYYLSGGSVKQANKKFNNTGHDYEITLRSDS-IIE 325
Query: 280 AVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
A E P+ V + E+ Y +L+D++ VV+ + P + + + KR++
Sbjct: 326 AGGELLAAPKLILKRVKLGEIAGYAG--QLIDVLVVVEKMDPEATEFTSKAGKSLIKREM 383
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGRSTV 398
+ DE+ V ++LW + AT + L+D+ + ++A K + +F G SL T + +
Sbjct: 384 ELIDESGALVRLTLWGDEAT---KALVDDYVQK-VIAFKGVIPREFNGGFSLGTGSATRI 439
Query: 399 LVSPDLPEAKKLKSWYE-----SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS 453
+ P++ +L WY +E K S A+ GS G + M + S
Sbjct: 440 ISVPEIAGVSELYDWYANVKPTTEVKMMSQAAGGSNEAPRTIAGLQEMQFGKDS------ 493
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEE 511
+K + ++KA I+ + P A+ YR C + C KK+ G Y CE C KN +
Sbjct: 494 ------DKGDYATVKAMITRVNPTNAL-YRGCASEGCQKKLVGENGD-YRCEKCNKNMNK 545
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
Y+M + D +G+ +++ F + A +I+G SA EL EL + D+ Y + + +
Sbjct: 546 FKWLYMMQFELSDETGQVYVTAFGDSAAKIVGKSAAELGELHDESPDE--YNAIFERLQF 603
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
VP + R+ YN E RQ++TV V V+
Sbjct: 604 VPKMWRLRCKMDSYNEEVRQKMTVYGVDDVN 634
>gi|82539990|ref|XP_724343.1| replication A protein [Plasmodium yoelii yoelii 17XNL]
gi|23478957|gb|EAA15908.1| putative replication A protein [Plasmodium yoelii yoelii]
Length = 1168
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 232/461 (50%), Gaps = 31/461 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+ Y W IK RV SK N+R + EG VFN+EL DE G +I+ F +A K
Sbjct: 708 PINKLSQYSTKWIIKARVQSKDNIRKFYTGNKEGKVFNIELCDESG-EIKVNFFGKAVDK 766
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+YD ++GK+Y IS+G ++ ANK+F T+++D E+ L+ENS +E IP+ +NF
Sbjct: 767 WYDYLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFY 826
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
I E+ +N LVD+IG+V + I K + K+D+ + DET T+ V+LW
Sbjct: 827 SISEIKANMNTGTLVDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWG 886
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE 415
E A + +E+ N ++ I+ K LKVG++QG L + ++ V ++P+L +A LK+W+
Sbjct: 887 ENAVKM-EEM--NITENCIICFKCLKVGEWQGKKLESHPKTKVEINPELDKAYTLKNWWV 943
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE-----KPVFFSIKAY 470
+ K ++ + + + + N ++ S + ++ I N +L +E K + F+ +
Sbjct: 944 NNKK--NVYNTINLTTTTSNNNMLNLESQK-TIQEIKKNVNLANEEVLSGKGIIFTTFGF 1000
Query: 471 ISLIKPDQAMWYRACKTCNKKVT------------DALGSGYWCEGCQKNDEECSLRYIM 518
I I + Y AC CNKK+ + +C C KN+ Y +
Sbjct: 1001 IDHIY-NAIPVYSACPNCNKKMVATVIEDGEQDMDQNVSESMYCAKCNKNNIPV-YNYSI 1058
Query: 519 VARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQ-LGDDNSYQMKLKEVTWV-PHL 575
++ D + +S F A+ I+ G SA+E +L+ + + +N L E +
Sbjct: 1059 NLKITDNTDSLRVSAFANSAKTIMNGLSAEEFMKLRQEYISQENIENFDLIEKAKLNEFF 1118
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVD--FAAESKFLLEEI 614
R+ + +E ++ T+ P+ ++L++EI
Sbjct: 1119 FRIKAYMTSHMDEIKKNYTILETIPLSKLLVDNCRYLIKEI 1159
>gi|326484265|gb|EGE08275.1| replication factor A 1 [Trichophyton equinum CBS 127.97]
Length = 538
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 188/370 (50%), Gaps = 21/370 (5%)
Query: 250 RGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL 309
+ L++A K+F V NDYE+ + ++ VE+A ++ +PQ +FNF + L GT
Sbjct: 182 KARLKMAKKEFSNVNNDYELTFDRDTVVEKAEDQND-VPQIRFNFTSLGNLQSIDKGT-T 239
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
+D++G++++V T + K+ + KR++T+ D + +V +++W ATN D
Sbjct: 240 IDVLGILKDVDATSQVTSKTTGKPYDKRELTLVDNSGFSVRLTVWGNTATN-----FDTP 294
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+S +VA K +KV DF G +LS L TV V PD+ EA +LK WY+++GK S + S
Sbjct: 295 PES-VVAFKGVKVSDFGGRTLSLLSSGTVTVDPDIEEAHRLKGWYDAQGKSNSFTAYSSD 353
Query: 430 LGSLAKNGARSMYS-DRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--K 486
+ + + I S S FS+KA + +K + + Y AC +
Sbjct: 354 TTGGGGGSWPTFKTISEIRDEEIPSADSFES-----FSLKATVIHVKDN--LCYPACPNE 406
Query: 487 TC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCS 545
C NKKVT + CE C+++ RYI+ CD +G+ W+S F+E + I G +
Sbjct: 407 ACKNKKVTRGDLDQWHCERCERSYANPKYRYILSLNACDHTGQIWLSCFDEAGQMIFGMT 466
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
ADEL ++K DD + K T+ + Y ++R R V A P+D+A
Sbjct: 467 ADELMKIKED--DDAAANEITKGATYCTWNFKCRAKLDTYQEQQRTRYNVIAATPIDYAT 524
Query: 606 ESKFLLEEIS 615
E+ L + I+
Sbjct: 525 EADQLSKLIA 534
>gi|308502550|ref|XP_003113459.1| CRE-RPA-1 protein [Caenorhabditis remanei]
gi|308263418|gb|EFP07371.1| CRE-RPA-1 protein [Caenorhabditis remanei]
Length = 656
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 220/452 (48%), Gaps = 43/452 (9%)
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY--KNARGEGCVFNVELTDEDG 221
PA R A + P+ + PY N+ I V+ K ++RT+ KN R VFN E+TD +G
Sbjct: 211 PARRGASNTGIIPIAMVTPYVNNFKIHGMVSRKEDIRTFPAKNTR----VFNFEVTDTNG 266
Query: 222 TQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV 281
I+ FNEAA F+ YYI+ G++R ANK++ +DYE+ L +S V EA
Sbjct: 267 DTIRCCAFNEAAESFFGMITENLSYYIAGGSVRQANKRYNNTGHDYEITLRSDS-VIEAG 325
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS--PTMSIRRKSNNEMVPKRDI 339
E P+ V + E+ + G L+D++ VV + PT R + + KR++
Sbjct: 326 GELLAAPKLNLRRVRLSEVAGHCGG--LIDVLAVVDKMDDEPTEFTSRAG--KTLVKREM 381
Query: 340 TVADETKRTVTVSLWNELATNV-GQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGRST 397
+ DE+ V ++LW E AT QE + +VA K + +F G +L T +
Sbjct: 382 ELIDESSAMVRLTLWGEEATKADAQEY-----QQKVVAFKGVIPKEFNGGYTLGTGSGTR 436
Query: 398 VLVSPDLPEAKKLKSWYE-----SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT 452
++++PD+ L WY +E K S S GS G + M + S
Sbjct: 437 IILAPDIGGVADLYDWYHNTKPSAEVKMISQTSGGSNDIPRTIAGLQEMQFGKDS----- 491
Query: 453 SNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDE 510
EK + S+KA I+ I P+ A+ Y+ C + C KKV + G Y CE C K+
Sbjct: 492 -------EKGDYASVKAMITRINPNNAL-YKGCASEGCQKKVVETDGE-YRCEKCNKSMN 542
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
+ Y+M + D +G+ +++ F + A +++G +A E+ +LK + + Y + +
Sbjct: 543 KFKWLYMMQFELSDETGQVYVTAFGDTAAKVVGKTAAEIGDLKEE--NPEEYNGVFERIQ 600
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
+ P + ++ + YN E RQ++TV V V+
Sbjct: 601 FAPKMWKLRCKMETYNEETRQKMTVFGVDEVN 632
>gi|312087571|ref|XP_003145524.1| replication factor A 73 kDa subunit [Loa loa]
Length = 607
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 216/436 (49%), Gaps = 31/436 (7%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ + PY W I VT+K ++R + AR + VFN ELTDE+G I+ F++ A K
Sbjct: 178 PIKLITPYVNKWRICGVVTAKEDLRNIRTARRDMKVFNFELTDEEGGCIRIAAFDDVAEK 237
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNF 294
FY Q G ++Y+S GT++ ANK+F T +DYE+ + +SEV ++ E P+ +
Sbjct: 238 FYSIIQKGSMFYVSGGTVKQANKRFNTTGHDYEITIRNDSEVLPCLDREKIEQPKLSLSI 297
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
V + + +V E +D+I + + V+ + + ++ + KRDI + D ++ +T++ W
Sbjct: 298 VRLCNVANHVG--EPIDVIAIAEKVNDIVEVTARNTGAQLEKRDIILIDASETEITLTFW 355
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLKSW 413
E A +E+ + + IK V ++ G +SLS S + ++ D E L W
Sbjct: 356 GEQARTYDKEI-----EGQTIGIKGAFVKEYNGNLSLSIGNSSRIELNMDCAETANLYRW 410
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG--DEKPVFFSIKAYI 471
Y A+N + + + ++ +LG EK +FF++ A I
Sbjct: 411 YRETRPSVQ-----------ARNLTTAGLTRDFRIIRLSEVGALGRDSEKGIFFNVTAMI 459
Query: 472 SLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
S +K D A+ Y++C T C KKV + L + Y CE C ++ +M + D SG
Sbjct: 460 SSLKADGAL-YKSCGTNGCKKKVIE-LNNQYRCEKCDITLDKYKYVLLMTVEISDFSGSH 517
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDD--NSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
W+++F ++A +++ A++L +L L +D + Y V + + R+ + YN
Sbjct: 518 WVTVFEDKAVKLLKNDAEQLGQL---LDNDLLDEYNEVFNAVRFREYTFRIRAKSEFYNG 574
Query: 588 EKRQRVTVRAVAPVDF 603
E++ + V + V+
Sbjct: 575 EEKIKWNVFDIHEVNL 590
>gi|84995782|ref|XP_952613.1| replication factor-a protein 1 [Theileria annulata strain Ankara]
gi|65302774|emb|CAI74881.1| replication factor-a protein 1, putative [Theileria annulata]
Length = 625
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 272/593 (45%), Gaps = 60/593 (10%)
Query: 37 LTGNRYMFNASDG------KKRLKAILPSNLSSEVISGNIQNKG-LIRLLDYALNEIPTK 89
+ N+Y+ DG K A++P L+ E G+ Q G +I Y + PTK
Sbjct: 47 IADNKYLIETLDGSVPVEYKHTCLALVP--LTPE---GDRQLIGKVISFTQYKV--APTK 99
Query: 90 SEKYLIVTKCEVVS-----------PALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGI 138
S +++T+ VV PAL ++ V D++ FK D + G
Sbjct: 100 SRYLVVLTRISVVPGDYRHLIGHLVPALIYHPRLAVVQDDN---FKNTMTD-LNSPVSGP 155
Query: 139 VLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN 198
V K + K+ + N P + + + L Y W I+ RV K
Sbjct: 156 VRKQENNRTVKTIS------NPYDPPMNKGKKDVPLTKISDLTLYTPKWQIRARVVFKSE 209
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+R + N RGE +F+V+L D +G +I+A F E+ K+Y + G+VY IS G L+ ANK
Sbjct: 210 IRKFNNQRGESQLFSVDLCDSNG-EIRAVFFGESVNKWYSFLEEGQVYSISGGQLKPANK 268
Query: 259 QFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQN 318
++ +++ E+ L+E+S ++ N+ + IP ++F P+D+L +G E +D+I +V
Sbjct: 269 RYNNLKHSCELILDESSYIQLFQNDES-IPSFCYSFTPLDQLQDIKSG-ETIDVIAIVVT 326
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
I K+ V KRD + D T TV V+ W + T + DN+ P+V +K
Sbjct: 327 ARDLQKINNKATGNNVEKRDFLLCDSTNTTVWVTSWGQ-KTQLFNYEGDNS--HPLVCLK 383
Query: 379 SLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGA 438
+KVG++QG L + V+ P +PEA KL+ W+ G + ++ N
Sbjct: 384 GVKVGEWQGKKLDVQISTQVICEPVIPEALKLRKWWNENGHNINFKQ-----ETVKTNN- 437
Query: 439 RSMYSDRVSLTHITSNPSLG------DEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV 492
+ ++ +++HI S+ + G D + F+ + I ++K D + +C C KK+
Sbjct: 438 -NFFNKLCTISHIISSTNQGLQFKSIDSNGMVFTTRGLIEVLK-DTNFCFPSCTGCRKKM 495
Query: 493 TDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL-NE 551
++ G Y C C + L YI+ ++ D S W S + E I+G A L N
Sbjct: 496 SNDQGCWY-CSKCNSSTNPIHL-YILNIKIVDESSHIWASAMADVGESIMGIKAYNLINL 553
Query: 552 LKSQLGDDN--SYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
++ ++N S+ ++ ++ ++ + + +E R + V P+D
Sbjct: 554 MERGPSNENEKSFINYFEDARLTEYIFKIKATVENFMDEPRIKYRVLKATPLD 606
>gi|66363290|ref|XP_628611.1| Rf-A (OB fold protein) [Cryptosporidium parvum Iowa II]
gi|46229828|gb|EAK90646.1| Rf-A (OB fold protein) [Cryptosporidium parvum Iowa II]
Length = 707
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 211/411 (51%), Gaps = 38/411 (9%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEA 232
V+P+ ++ Y W I RV SK ++R + +++ EG VF+ E+ D DG++I+AT F +A
Sbjct: 210 VYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADGSEIRATCFTKA 269
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFYD + G+VY SRG ++ AN +F T +++E+ NE++E+ +++ + IP+ F
Sbjct: 270 VDKFYDMLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFNEDAEI-QSLPQDDRIPKKTF 328
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NFVPI E+ Y G L D++G++ P +I KS KR++T+ D++ ++ ++
Sbjct: 329 NFVPISEIRGYSKGQSL-DLLGILLKAGPITTITVKSTGADTQKRELTIIDKSGHSIDLT 387
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD-LPEAKKLK 411
LW+E T++ + L+ ++P++A+K+ V +F G L S++ +P + ++++LK
Sbjct: 388 LWSE-RTHLDEGLI---SQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQELK 443
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD------EKPVFF 465
+W+ S+ S N S + R+S+ I + + G + ++
Sbjct: 444 NWFFSQSNLHESVVSLSSSSPSPGNTNSSSSAKRLSIDEIVATATSGSSSSDMLDGGIWV 503
Query: 466 SIKAYISLIKPDQAMWYRACKTCNKKVTD----------------------ALGSGYWCE 503
I I+ ++ W +C C +KVT+ +LG Y C
Sbjct: 504 HTYGTIRSIRDNKYYW-SSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCP 562
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELK 553
CQ++ E +YI+ + D +G F E E I+ G S ++L LK
Sbjct: 563 SCQQSIENPIKKYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLK 613
>gi|403342085|gb|EJY70353.1| hypothetical protein OXYTRI_08899 [Oxytricha trifallax]
Length = 769
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 228/464 (49%), Gaps = 34/464 (7%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ +LN + +W I+ R+ K + R KN G + +E+ D T I+AT FN+AA
Sbjct: 304 IMPIKALNTFSRDWKIQARIVQKSDKRQTKNG---GSLLKMEIVDRYNTPIEATFFNDAA 360
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
F + +GKVY G++++ANK+F TV+ND+ + ++S++ E ++ + I Q F
Sbjct: 361 DFFEHKIHVGKVYDFCDGSIKLANKKFTTVKNDFTLTFEKSSQITEVADDGS-ISQETFE 419
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
+ PI + G +D+IGVV +++ +I+ K NN +R IT+ DE+ ++++++
Sbjct: 420 YQPISKCEDLTVGAS-IDLIGVVLDITSCDTIKLK-NNRQKQRRYITIIDESFCSISLTI 477
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL-GRSTVLVSPDLPEAKKLKS 412
W E + ++ + I+A+K ++ +F G +++ ++++V+P P KK+
Sbjct: 478 WGEGFC----QRMNEVGQGDILAMKGGRLSEFGGKTINVADDHASIMVNPSNPRGKKVYD 533
Query: 413 WY--ESEGKGTSMASIG--SGLGSLAKNGARSMYSD-------RVSLTHITSNPS-LGDE 460
WY + +G SM I S L S + A D R L I S L DE
Sbjct: 534 WYIQQVQGGEESMKQIKHLSNLQSSRSDKAELNVVDQSNDKQRRNQLNFICEITSMLQDE 593
Query: 461 KPV----FFSIKAYISLIKPDQAMWYRAC--KTCNKKVTD---ALGSGYWCEGCQKNDEE 511
V FF + YISLIK D ++Y AC C +KVT+ G Y CE C K
Sbjct: 594 NDVDQQHFFFLNGYISLIKNDDKIFYIACPNDNCRRKVTEEHQQQGQAYRCEACNKVYRT 653
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
C Y++ A++ D + +I+ + ++G +A E + + ++ + +
Sbjct: 654 CQPTYMIQAKITDFTDTIYINFPRDNGTALMGMTAQEFKHFRDRATEE-ELSAYFDSLLF 712
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPV-DFAAESKFLLEEI 614
+ V + Y E R R V P+ + +E++ L++ +
Sbjct: 713 KQFNIMVKGKFEFYGGENRMRFFAIKVFPIKEVMSENRALIKRL 756
>gi|58372552|gb|AAW71479.1| replication protein A large subunit [Cryptosporidium parvum]
Length = 688
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 211/411 (51%), Gaps = 38/411 (9%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEA 232
V+P+ ++ Y W I RV SK ++R + +++ EG VF+ E+ D DG++I+AT F +A
Sbjct: 191 VYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADGSEIRATCFTKA 250
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFYD + G+VY SRG ++ AN +F T +++E+ +E++E+ +++ + IP+ F
Sbjct: 251 VDKFYDMLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFHEDAEI-QSLPQDDRIPKKTF 309
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NFVPI E+ Y G L D++G++ P +I KS KR++T+ D++ ++ ++
Sbjct: 310 NFVPISEIRGYSKGQSL-DLLGILLKAGPITTITVKSTGADTQKRELTIIDKSGHSIDLT 368
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD-LPEAKKLK 411
LW+E T++ + L+ ++P++A+K+ V +F G L S++ +P + ++++LK
Sbjct: 369 LWSE-RTHLDEGLI---SQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQELK 424
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD------EKPVFF 465
+W+ S+ S N S + R+S+ I + + G + ++
Sbjct: 425 NWFFSQSNLHESVVSLSSSSPSPGNTNSSSSAKRLSIDEIVATATSGSSSSDMLDGGIWV 484
Query: 466 SIKAYISLIKPDQAMWYRACKTCNKKVTD----------------------ALGSGYWCE 503
I I+ ++ W +C C +KVT+ +LG Y C
Sbjct: 485 HTYGTIRSIRDNKYYW-SSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCP 543
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELK 553
CQ++ E +YI+ + D +G F E E I+ G S ++L LK
Sbjct: 544 SCQQSIENPIKKYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLK 594
>gi|324505539|gb|ADY42379.1| Replication factor A 73 kDa subunit [Ascaris suum]
Length = 620
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 214/433 (49%), Gaps = 35/433 (8%)
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
P++ R + P+ L PY NW + ++V MR ++ +F+ D+DG +
Sbjct: 169 PSSSGGERRNITPIKLLTPYCKNWRLCIKVVCIEEMRQFRGTS----LFSFSGVDDDGVE 224
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+ FN A K +L ++YYI R +++ K+FK Q D E+ + + +E+ E ++
Sbjct: 225 IRICAFNHLAEKVAALVKLDQMYYIRRASVKPTTKRFKRNQYDMEVIIRDETEIIECIDR 284
Query: 284 TAF-IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
P+ + +F+ I L ++ N VD++GVV+ V + K +V KRDI +
Sbjct: 285 AEISSPKIRCDFIRIRNLPKFANSE--VDMMGVVREVGDVKQLTGKMGEALV-KRDIQIV 341
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVS 401
D++ R+V +LW E A N D + I+ K V + G ISLST G + V V+
Sbjct: 342 DDSLRSVIATLWGERAKN-----FDASSDVTILVFKRALVRTYHGSISLSTTGSTIVDVN 396
Query: 402 PDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
DLPE K L+ WYE G AS + L + + + V + + K
Sbjct: 397 ADLPEVKALRRWYE----GNRNASFAALSTELIFSSSEHKWIGEVKVLN----------K 442
Query: 462 PVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
++F++ A I I D A+ Y+ C + C KK+ + G+ + C C ++ Y +
Sbjct: 443 MIYFNVTAMIMNINVDNAV-YKGCVNEGCRKKLLEVDGTLH-CPKCGNASDDYKYFYTLS 500
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
+CD +G W+S+F++ AE+++G SADE+ + +S + ++Y + + + + RV
Sbjct: 501 MELCDMTGTHWVSVFDDSAEKLMGESADEIAKTRS--FNYDTYCAHFRALLFKTYAFRV- 557
Query: 580 VAQQEYNNEKRQR 592
VA++ N+ R
Sbjct: 558 VARRCENDSSISR 570
>gi|67603419|ref|XP_666551.1| replication protein A 70kDa [Cryptosporidium hominis TU502]
gi|54657572|gb|EAL36324.1| replication protein A 70kDa [Cryptosporidium hominis]
Length = 686
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 211/411 (51%), Gaps = 38/411 (9%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEA 232
V+P+ ++ Y W I RV SK ++R + +++ EG VF+ E+ D DG++I+AT F +A
Sbjct: 189 VYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADGSEIRATCFTKA 248
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFYD + G+VY SRG ++ AN +F T +++E+ NE++E+ +++ + IP+ F
Sbjct: 249 VDKFYDVLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFNEDAEI-QSLPQDDRIPKKTF 307
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NFVPI E+ Y G L D++G++ P +I KS KR++T+ D++ ++ ++
Sbjct: 308 NFVPISEIRGYSKGQSL-DLLGILLKAGPITTITVKSTGADTQKRELTIIDKSGHSIDLT 366
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD-LPEAKKLK 411
LW+E T++ + L+ ++P++A+K+ V +F G L S++ +P + ++++LK
Sbjct: 367 LWSE-RTHLDEGLI---SQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQELK 422
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD------EKPVFF 465
+W+ S+ S N + + R+S+ I + + G + ++
Sbjct: 423 NWFFSQSNLHESVVSLSSSSPSPGNTNSNSSAKRLSIDEIVATATSGSSSSDMLDGGIWV 482
Query: 466 SIKAYISLIKPDQAMWYRACKTCNKKVTD----------------------ALGSGYWCE 503
I I+ ++ W +C C +KVT+ +LG Y C
Sbjct: 483 HTYGTIRSIRDNKYYW-SSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHCP 541
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELK 553
CQ++ E +YI+ + D +G F E E I+ G S ++L LK
Sbjct: 542 SCQQSIENPIKKYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLK 592
>gi|123446475|ref|XP_001311988.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893818|gb|EAX99058.1| hypothetical protein TVAG_433860 [Trichomonas vaginalis G3]
Length = 659
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 231/462 (50%), Gaps = 30/462 (6%)
Query: 165 AARLAMTRRVHPLVSLNPY-QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
A R + R + P+ +L Y W I+VR+ S + RTY+N GEG + N+ + D+ GT
Sbjct: 218 AIRQSQNRIIIPISALCQYTHPGWMIRVRIVSISDPRTYRN--GEGKLMNITMKDDSGTS 275
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+ T FNE ++ + +L VY +S G ++VANK++ NDYE++ ++ + +E+ ++
Sbjct: 276 IRGTFFNENVDRWQPKLKLNNVYKVSGGRVKVANKEYNNTGNDYEISFDDATSIEDDQDD 335
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
+ I FNFV +D+L + T VDIIG V ++ K N M+ KR + +AD
Sbjct: 336 GS-ISTLSFNFVKLDQLAERPDNT-TVDIIGWVTTSDQAVTFTSKKGNTML-KRRLEIAD 392
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
+T + ++ + LA + +E + ++A ++ F+G SL T+ + V P
Sbjct: 393 DTNSKIELTFFGYLANKLPEE------PNYVLAAGPCRISPFRGKSL-TMFDGNLQVEPA 445
Query: 404 LPEAKKLKSWYESEGKGT--SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
+PE +++W+ G+ T M S+ +G + N S + L+ I +EK
Sbjct: 446 IPETNAIRAWWNQTGQFTLGEMKSLSNGDVGMGGN------SQTLHLSAIDEQGLGQNEK 499
Query: 462 PVFFSIKAYISLIKPDQAMWYRAC--KTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIM 518
+F ++ + ++ Y AC + C NK +T Y+CE CQ+ + R++
Sbjct: 500 GDYFMAYVTLAELSSNKKFCYAACPNEDCKNKGLTPNEDGTYFCEKCQQ-PKTPRWRWMF 558
Query: 519 VARVCDGSGEAWISIFNEE--AERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL- 575
++ D SG + S+ + + I G +EL++ + + D+ + MK + +L
Sbjct: 559 NTKISDFSGSLYASVIGNDQVGDLIFGKKVNELHDELADVKDEET--MKFTMPLFFRNLK 616
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKK 617
+R++ Y E R +V + + +++A +KF EI K+
Sbjct: 617 VRLNARLDNYGMESRIKVNIVGASEMNYAEAAKFFASEIEKQ 658
>gi|341897567|gb|EGT53502.1| hypothetical protein CAEBREN_14752 [Caenorhabditis brenneri]
Length = 658
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 215/452 (47%), Gaps = 40/452 (8%)
Query: 164 PAARLAMT---RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY--KNARGEGCVFNVELTD 218
P AR + R V P+ + PY + I +T K +R++ KN + VFN E+TD
Sbjct: 210 PPARRGPSNTERGVMPIAMITPYVNGFKINGTITRKEEIRSFPAKNTK----VFNFEITD 265
Query: 219 EDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
+G I+ FNE A Y Y+IS G +R ANK+F +DYE+NL N +
Sbjct: 266 SNGDTIRCVAFNELAESLYSTITENLSYFISNGQVRQANKRFNNTGHDYEINL-RNDSIV 324
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
EA + P+ + + E+ + E++D++ V+ + P + + + KR+
Sbjct: 325 EAGGDVVAAPKLHLKRISLGEIAGHCG--EMIDVLAYVEKMDPEPTEFTSKAGKTLVKRE 382
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGRST 397
+ + DE+ V ++LW E A+ L D K +VA K + +F G SL T S
Sbjct: 383 MELIDESGAVVRLTLWGEEASKA--PLEDYLHK--VVAFKGVIPREFNGGYSLGTGFGSR 438
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK-----NGARSMYSDRVSLTHIT 452
V+ P++ +L WY + + I GS ++ G + M + S
Sbjct: 439 VIAVPEISGVAELYEWYNTVKPTVDVKMISQTSGSSSEAPRTIAGLQEMQFGKDS----- 493
Query: 453 SNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDE 510
EK + S+KA I+ I P+ A+ Y+ C + C KKV ++ G + CE C K
Sbjct: 494 -------EKGDYVSVKAMITRINPNNAL-YKGCSSEGCQKKVIESDGD-FRCEKCNKTMR 544
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
Y+M + D +G+ +++ F + A +++G +A E+ ELK D+ Y +++
Sbjct: 545 HFKWLYMMQFELSDETGQVYVTAFGDNATKVVGRTAAEVGELKEANPDE--YNAVFEKLQ 602
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
++P + R+ + YN E RQ++TV V V+
Sbjct: 603 FIPKMWRLRCKMETYNEEVRQKMTVFGVEEVN 634
>gi|401885437|gb|EJT49554.1| hypothetical protein A1Q1_01298 [Trichosporon asahii var. asahii
CBS 2479]
Length = 387
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 201/409 (49%), Gaps = 52/409 (12%)
Query: 21 SSSDIPE---IVVQVLDLKLTG---------NRYMFNASDGKKRLKAILPSNLSSEVISG 68
++S+ PE V+QVL +K +RY SDG+ ++++L + L+ V +
Sbjct: 15 TASETPEGVEPVLQVLSVKRINSPASGAQATDRYRVILSDGEYFIQSMLATQLNHLVEND 74
Query: 69 NIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQE 128
++ +I+L + +N + ++ K +I+ + +E ++ + P
Sbjct: 75 ELEKNTVIKLTSFVINTV--QNRKLIII-------------LALERQNWNGQKVGNPVNV 119
Query: 129 DEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRR----VHPLVSLNPYQ 184
D+ G V P E + R N PAA R + P+ L+P
Sbjct: 120 DQRAAGG---VASPAPEAAPVTNGAASRGGASNARPAAAPRGPSRDMGPIFPIEGLSP-- 174
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
WTIK RVT K +++ + N RGEG +F+V L DE G +I+AT FN+ FY + GK
Sbjct: 175 --WTIKARVTQKSDIKHWSNQRGEGKLFSVTLMDETG-EIRATGFNDQVDAFYQLLEEGK 231
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
V++IS+ + +A KQF V N+YE+ +E+E +V P+ K+NF +++L +
Sbjct: 232 VFFISKARINIAKKQFSNVNNEYEITFENQTEIEPSV------PEIKYNFTKLNDL-ESL 284
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
D+IGVVQ V I K+ + KRDI + D++ ++V ++LW + A N
Sbjct: 285 QKDATTDVIGVVQEVHDLGQITSKATQKPFNKRDIQLVDQSGQSVRLTLWGKTAENFTHY 344
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
P+VA K +KV DF G SLS +T+ ++P+ EA L+ W
Sbjct: 345 ------DHPVVAFKGVKVSDFGGRSLSMFSSATMAINPNTDEACALRGW 387
>gi|268530894|ref|XP_002630573.1| C. briggsae CBR-RPA-1 protein [Caenorhabditis briggsae]
gi|74961121|sp|O97472.1|RFA1_CAEBR RecName: Full=Probable replication factor A 73 kDa subunit;
AltName: Full=RP-A p73; AltName: Full=Replication factor
A protein 1; Short=RF-A protein 1
gi|4028997|emb|CAA10310.1| F18A1.5 protein [Caenorhabditis briggsae]
gi|4033360|emb|CAA10466.1| F18A1.5 protein [Caenorhabditis briggsae]
Length = 658
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 217/438 (49%), Gaps = 31/438 (7%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY--KNARGEGCVFNVELTDEDGTQIQATMF 229
R V P+ + PY N+ I V+ K +++ KN + +FN E+TD +G I+ T F
Sbjct: 221 RGVIPIAMVTPYVNNFRIHGMVSRKEDIKNIPAKNMK----IFNFEITDSNGDTIRCTAF 276
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
NE A F+ YY+S G++R ANK+F +DYE+ L N V EA E P+
Sbjct: 277 NETAESFHSTITENLSYYLSGGSVRQANKKFNNTGHDYEITL-RNDSVVEAGGELLAAPK 335
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
V + E+ + E++D++ +V+ + + + + KR++ + DE++ V
Sbjct: 336 LNLKRVSLAEIAGHCG--EMIDVLVIVEKMDAEATEFTSKAGKTLTKREMELIDESQALV 393
Query: 350 TVSLWNELATNVGQELLDNAD--KSPIVAIKSLKVGDFQ-GISLSTLGRSTVLVSPDLPE 406
++LW + A N D ++A K + +F G SL T + ++ P++
Sbjct: 394 RLTLWGDEAIKA------NVDDYHGKVIAFKGVIPREFNGGYSLGTGSGTRIIPVPEISG 447
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
+L WY +E + + I G +++ R++ + + GD + S
Sbjct: 448 VSELYDWYTTEKPHSELKLISQTSGGMSE-APRTIAG--LQEMQFGKDSDKGD----YAS 500
Query: 467 IKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
+KA I+ I P+ A+ Y+ C + C KKV ++ G Y CE C K+ + Y+M + D
Sbjct: 501 VKAMITRINPNSAL-YKGCASEGCQKKVIESDGE-YRCEKCNKSMNKFKWLYMMQFELSD 558
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
+G+ +++ F + A +++G +A E+ +LK + + N Y + + +VP + R+ +
Sbjct: 559 ETGQVYVTAFGDSAAKVVGKTAQEVGDLKDE--NLNEYNATFERLQFVPKMWRLRCKMET 616
Query: 585 YNNEKRQRVTVRAVAPVD 602
YN E RQ++TV +V V+
Sbjct: 617 YNEEVRQKMTVFSVEEVN 634
>gi|361128289|gb|EHL00233.1| putative Replication factor A protein 1 [Glarea lozoyensis 74030]
Length = 365
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 192/366 (52%), Gaps = 23/366 (6%)
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDI 312
+ +A KQF + NDYE+ ++++ VE+ ++ +PQ ++NF I L + V +D+
Sbjct: 13 VNLAKKQFSNINNDYELAFDKDTIVEKCEDQND-VPQVRYNFTNIGAL-QEVEKDSTIDV 70
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IGV++ V+ I K+ + KRD+T+ D++ +V +++W + AT +A+
Sbjct: 71 IGVLKEVNDVNQIVSKTTQQPYDKRDLTLVDDSGYSVKMTIWGKTATKF------DANPE 124
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS 432
IVA K KV DF G SLS L ++ + PD+ EA KLK WY+S G+ + A+ S G+
Sbjct: 125 QIVAFKGAKVSDFNGKSLSLLSSGSMSIDPDIAEAYKLKGWYDSNGRSETFAAHTSTAGA 184
Query: 433 LAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KTCN 489
G R ++ + + +LG ++K +F++KA I IK D + Y AC + CN
Sbjct: 185 A---GGR---NNELKTVAQVKDENLGMNDKDDYFAVKATIVYIKQD-PISYPACASENCN 237
Query: 490 KKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
KKV + +GYW C C N + R+IM V D +G ++S F++ I+G + D+
Sbjct: 238 KKVIE--DNGYWTCASCNINHPKPQHRFIMTVNVSDHTGSFYLSCFDDVGRLIMGMNGDQ 295
Query: 549 LNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESK 608
L ELK D+ + ++ + Y +++R R V AP+DF E++
Sbjct: 296 LMELKET--DNEAVNKAFEDANCKTYTFTCRAKMDTYQDQQRVRYQVLRAAPIDFKQEAR 353
Query: 609 FLLEEI 614
L E I
Sbjct: 354 KLTELI 359
>gi|341899815|gb|EGT55750.1| CBN-RPA-1 protein [Caenorhabditis brenneri]
Length = 658
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 216/452 (47%), Gaps = 40/452 (8%)
Query: 164 PAARLAMT---RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY--KNARGEGCVFNVELTD 218
P AR + R V P+ + PY + I +T K +R++ KN + VFN E+TD
Sbjct: 210 PPARRGPSNTERGVMPIAMITPYVNGFKINGTITRKEEIRSFPAKNTK----VFNFEITD 265
Query: 219 EDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
+G I+ FNE A Y Y+I+ G +R ANK+F +DYE+NL +S V
Sbjct: 266 SNGDTIRCVAFNELAESLYSTITENLSYFITNGQVRQANKRFNNTGHDYEINLRNDSIV- 324
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
EA + P+ + + E+ + E++D++ V+ + P + + + KR+
Sbjct: 325 EAGGDVVAAPKLHLKRISLGEIAGHCG--EMIDVLAYVEKMDPEPTEFTSKAGKTLVKRE 382
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISLSTLGRST 397
+ + DE+ V ++LW E A+ L D K +VA K + +F G SL T S
Sbjct: 383 MELIDESGAVVRLTLWGEEASKA--PLEDYLHK--VVAFKGVIPREFNGGYSLGTGFGSR 438
Query: 398 VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK-----NGARSMYSDRVSLTHIT 452
V+ P++ +L WY + + I GS ++ G + M + S
Sbjct: 439 VIAVPEISGVAELYEWYNTVKPTVDVKMISQTSGSSSEAPRTIAGLQEMQFGKDS----- 493
Query: 453 SNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDE 510
EK + S+KA I+ I P+ A+ Y+ C + C KKV ++ G + CE C K
Sbjct: 494 -------EKGDYVSVKAMITRINPNNAL-YKGCSSEGCQKKVIESDGD-FRCEKCNKTMR 544
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
Y+M + D +G+ +++ F + A +++G +A E+ ELK D+ Y +++
Sbjct: 545 HFKWLYMMQFELSDETGQVYVTAFGDNATKVVGRTAAEVGELKEANPDE--YNAVFEKLQ 602
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
++P + R+ + YN E RQ++TV V V+
Sbjct: 603 FIPKMWRLRCKMETYNEEVRQKMTVFGVEEVN 634
>gi|209879421|ref|XP_002141151.1| replication factor-A protein 1 [Cryptosporidium muris RN66]
gi|209556757|gb|EEA06802.1| replication factor-A protein 1, putative [Cryptosporidium muris
RN66]
Length = 870
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 215/409 (52%), Gaps = 35/409 (8%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEA 232
V+P+ S+ Y W I RV SK ++RT+ +++ EG VF+ E+ D +G+QI+AT F +A
Sbjct: 376 VYPIKSITSYLHRWRIIGRVISKSDVRTFSSSKSKEGKVFSFEICDAEGSQIRATCFTKA 435
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
KFY+ + G++Y S+G ++ AN +F + +E+ NE++++ +++ E + IP+ +
Sbjct: 436 VDKFYEFLKEGEIYSFSKGDVKEANAKFNKTGHGFEIIFNEDADI-QSMPEDSRIPKKAY 494
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
NFV I ++ Y G + +DI+G++ SP M+I KS KR++T+ D + ++ ++
Sbjct: 495 NFVSIADIRNYSKG-QSIDILGILWKASPIMTITIKSTGADTQKRELTILDRSGYSIDLT 553
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKLK 411
LW+E TN+ + +L ++P++A+K+ + +F G L +++ +P ++ +A +L+
Sbjct: 554 LWSE-RTNLDEGML---AQNPMIAVKNAIIEEFNGFKLKFGPNTSIEWNPINIEQADELR 609
Query: 412 SWYESEGKGTSMASI---GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
W++ S+ S+ +G + N R + ++ N S + ++
Sbjct: 610 QWFQESNNQNSIVSLSANSTGNINSVTNSQRQSIEEIIATATSGVNSSDILDGGIWVFTN 669
Query: 469 AYISLIKPDQAMWYRACKTCNKKVTD--------AL--------------GSGYWCEGCQ 506
A I I+ ++ W +C+ C +KVT+ AL G Y C CQ
Sbjct: 670 ATIRTIRDNKYFW-SSCRQCKRKVTEIEDPNSVSALILPFSSENGNKVNTGPNYHCPNCQ 728
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELKS 554
+ E+ +YI+ + D +G F E E I+ G + D+L +++
Sbjct: 729 QTIEDPLKKYILSCELIDSTGTLRAVAFAEHGESIMDGLNVDQLESMRN 777
>gi|402220694|gb|EJU00765.1| replication factor-a protein, partial [Dacryopinax sp. DJM-731 SS1]
Length = 493
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 251/526 (47%), Gaps = 53/526 (10%)
Query: 47 SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPAL 106
SDG++ +A+L S + I G + +I+ ++ +++ K+ +I+ +VV
Sbjct: 4 SDGQRFTQAMLASQNNHFAIDGYLTKNCIIKATRFSRSKVQDKT--IIIILAMDVVKQEK 61
Query: 107 EMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAA 166
E + DE +P K ++ A +A + + A+
Sbjct: 62 ERLGMPQSILDEGPTFAQPATPTSTKTS-------TINKISAGAATK-------SFTKAS 107
Query: 167 RLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
L + P+ L+PY+ WT+K R+T K ++R + N RG G +FN +TDE G+ I+A
Sbjct: 108 GLKGEPTITPINQLSPYRNQWTVKARITKKSDVRKWSNERGSGYLFNCTMTDETGS-IKA 166
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF 286
T F E + + GKVYYIS+G + A K + T DYE+ NE++ V E N+ +
Sbjct: 167 TAFMEQCDRLLKEIEEGKVYYISKGKILPAKKIYNTTGCDYEITFNESTNV-ELCNDDSN 225
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE--MVPKRDITVADE 344
+P F++ + LG ++ + + IGVV++ R +N+E P I + D
Sbjct: 226 MP-GGFSYTVLANLGD-LSKDDTCNAIGVVRS-----RWRTWNNHEENSAPHAHIIIVDH 278
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+ + V+LW ++A E D D+ P++A++ +KVGD+ G L+ G S++ ++PDL
Sbjct: 279 SGFSCKVTLWGKVA-----EDFDVKDQ-PVIALRHVKVGDYHGRDLNFQGDSSMTLNPDL 332
Query: 405 PEAKKLKSWYESEGKGTSM----ASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
EA L+ WY++ G + GSG L +S ++L + S ++G +
Sbjct: 333 KEAHFLRGWYDANGLTYKFQPCQGASGSGESGLVN------HSQLMTLEEVKSK-NIGIK 385
Query: 461 KPVFFSIKAYISL---IKPDQ---AMWYRACKT--CNKKVT-DALGSGYWCEGCQKNDEE 511
+F++K + IK + + Y AC++ C K ++ D + C C +
Sbjct: 386 TTSYFTVKLRVKATPRIKEENRHMPISYPACRSEDCVKGLSYDDSDRKWHCAKCSGCFDA 445
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLG 557
RY+M + D G AW +I++ + + A+ L ++K LG
Sbjct: 446 PEYRYLMRISLGDHMGSAWFNIYDNVGKLLFEKKAEVLEQMKVWLG 491
>gi|71030044|ref|XP_764664.1| replication factor A protein [Theileria parva strain Muguga]
gi|68351620|gb|EAN32381.1| replication factor A protein, putative [Theileria parva]
Length = 458
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 191/391 (48%), Gaps = 32/391 (8%)
Query: 171 TRRVHPLV---SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
T++ PL L Y W+I+ RV K +R + N RGE +F+V+L D +G +I+A
Sbjct: 35 TKKDVPLTKISDLTLYTPKWSIRARVVFKSEIRKFNNQRGESQLFSVDLCDSNG-EIRAV 93
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
F E+ K+Y + G+VY IS G L+ ANK+F +++ E+ L+E+S ++ N+ + I
Sbjct: 94 FFGESVNKWYSFLEEGQVYSISGGQLKPANKRFNNLKHTCELILDESSHIQLFQNDES-I 152
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
P ++F P+D+L +G E +D+I +V I KS V KRD + D T
Sbjct: 153 PSFCYSFTPLDQLQDVKSG-ETIDVIAIVVTAKDVQKINNKSTGNNVEKRDFLLCDSTNT 211
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
TV V+ W + + + P+ VG++QG L G + V+ P +PEA
Sbjct: 212 TVWVTSWGQKTQLFNYQ---GENSHPL-------VGEWQGKKLDVQGSTQVICEPVIPEA 261
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG------DEK 461
KL+ W+ + + S S ++ +++HI S+ + G D
Sbjct: 262 LKLRKWWNENSQNVNFQQEVS-------KTTNSTFNKLCTISHIISSTNQGLQFKSIDSN 314
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
+ F+ +A I ++K D + +C C KK+T+ G Y C C + L YI+ +
Sbjct: 315 GMVFTTRALIEVLK-DTNFCFPSCTGCRKKMTNDQGIWY-CPKCNSSTNPVHL-YILNIK 371
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNEL 552
+ D + W + ++ E I+G A +L +L
Sbjct: 372 IVDETSHIWATAMSDVGESIMGIKAYKLIKL 402
>gi|399216333|emb|CCF73021.1| unnamed protein product [Babesia microti strain RI]
Length = 676
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 230/455 (50%), Gaps = 30/455 (6%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L+ Y WTI R+ K ++R + RGE +F+++L D ++I+AT+F +A K+++
Sbjct: 237 LSLYTPKWTILARIMLKSDIRKFNTPRGESQLFSLDLCDS-TSEIKATLFGDAVNKWFEF 295
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
F+ GKVY IS+G +R ANK+F + + E+ L+E++ V+ V++ IP + F+F +
Sbjct: 296 FEEGKVYSISKGQIRAANKKFNHLNHPCEIILDEHAIVQN-VDDDNSIPSSVFSFTKLSN 354
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+ G+ L+D+IGVV S+++KS ++ KRDI + D++ ++ V+LW++ AT
Sbjct: 355 IDILDQGS-LIDVIGVVCQHKNIQSLQKKSLGGVIEKRDIKIVDDSGSSIWVTLWHDKAT 413
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY----- 414
++ LLD +PI+A+K+ K+ D+Q L + V+++P P+ L W+
Sbjct: 414 SLTDSLLDT---NPIIALKNAKITDWQMRKLDVQSSTKVVINPQHPQTDLLCKWWIEVTQ 470
Query: 415 --ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
GK T S+ +G L + Y + + T I + + + F+++ I
Sbjct: 471 FLTKNGKTTIFNSV--SIGGLEEEVESIDYLTKQA-TQIGQD---ANSQSKTFNVRGVIE 524
Query: 473 LIKPDQAMWYRACKTCNKK-VTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEA- 529
++K + W AC C KK + + S W C C + Y++ ++ D + +
Sbjct: 525 ILKENIYSW-PACPGCRKKMLQEQPESPIWRCTRCNMEGSP-NHTYMLNFKIVDTTQTSI 582
Query: 530 WISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W S E I+ G A+EL + S + + ++ H+ +V V + E
Sbjct: 583 WASAMGNVGEEIMGGVKAEELLAIASSEFNGKNLSNYFEDARLTEHIFKVRVQMDSFLGE 642
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQNA 623
R + V V P++ K L +EI+ +++ NA
Sbjct: 643 FRIKYRVVKVIPLE-----KVLDQEIADRLAKINA 672
>gi|154413577|ref|XP_001579818.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121914029|gb|EAY18832.1| hypothetical protein TVAG_294830 [Trichomonas vaginalis G3]
Length = 590
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 253/536 (47%), Gaps = 60/536 (11%)
Query: 24 DIPEIVVQVLDLKLTGNRYMFNA--SDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDY 81
++ E +VQV+ +K ++ A SDG + A+L S L + + IQ LI+LL Y
Sbjct: 17 NVMEPIVQVVQIKECNQHDLYRAALSDGTHFIPAMLGSKLKDLIENKVIQRNSLIKLLKY 76
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKP-----KQEDEVKKDGP 136
+ S++ LIV L E+ E+ S II KP + D K D
Sbjct: 77 T---VSNNSKQPLIV---------LNAELHKEMNS----IIGKPLALQIDRNDIPKPDLS 120
Query: 137 GIVLKPKQEMVAKSAAQILRDQNG---NMAPA----ARLAMTRRVHPLVSLNPYQGNWTI 189
+ P++ + S A + + ++P + + MT + P+ SLN Y +W++
Sbjct: 121 APMTSPQRGTITASPASVTNSPSKVKMTVSPTRSNQSTMQMTTNI-PIASLNQYLTSWSL 179
Query: 190 KVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS 249
VR+ SK MR ++ +R G +F++ + D++ +I+ T FN+ A KF + + KVY +S
Sbjct: 180 IVRIISKSQMRQFQGSR-PGKLFSIIMRDKNNDEIKGTFFNQEAEKFENLVEQDKVYKVS 238
Query: 250 RGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL 309
G ++ AN+++ + ++++E+ + S + E ++ + IP F I + + T
Sbjct: 239 CGRVKKANERYNSTKSEFEITFDSTSSIIEIPDDNS-IPANVLKFTKISDCSKMTGKT-- 295
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
VDII ++ + +I+ KS + + KR+ITV+DET T+ V+LW AT Q+
Sbjct: 296 VDIISIITFIGDCQTIKTKSGSS-IEKRNITVSDETG-TIEVTLWGSSATEFDQK----- 348
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES----EGKGTSMAS 425
+S I ++++ V DF+G+SL+ +T++V+P + K +++WYES + +
Sbjct: 349 -ESEIFCVRNVTVSDFRGVSLNVGQSATIVVNPPDNDVKNIRNWYESLNDEKKENLKQKL 407
Query: 426 IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC 485
+ G A L+ I E F + I + + Y+AC
Sbjct: 408 LIPDYGQAATINC---------LSEIDEKQMCRTENGEVFCVNVMIQDMPSSRKPVYQAC 458
Query: 486 --KTCNKK--VTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE 537
+ C + D C+ C K LRY + V D SG A+I++ +E
Sbjct: 459 PNEACRGSGLIIDQETGKMICKKCNKEVTNPKLRYSLSLNVGDYSGSAYINVIGDE 514
>gi|297736059|emb|CBI24097.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/111 (72%), Positives = 94/111 (84%)
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+G YVNG E V + GVVQ+VSPTM I+RKS+N++VPKRDIT AD+TK+TV VSLWN+ AT
Sbjct: 1 MGPYVNGKERVYVSGVVQSVSPTMRIQRKSHNDIVPKRDITFADKTKKTVVVSLWNDHAT 60
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
NVGQELLDNADK PIVAIKSLKVGDFQ +SLSTL S VLV+PD E KK+
Sbjct: 61 NVGQELLDNADKFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTREYKKV 111
>gi|297743678|emb|CBI36561.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 91/107 (85%)
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+G YVNG E V + GVVQ+VSPTM IRRKS+N++VPKRDIT AD+TK+TV VSLWN+ AT
Sbjct: 1 MGPYVNGKECVYVSGVVQSVSPTMRIRRKSHNDIVPKRDITFADKTKKTVVVSLWNDHAT 60
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
NVGQELLDNADK PIVAIKSLKVGDFQ +SLSTL S VLV+PD E
Sbjct: 61 NVGQELLDNADKFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPDTRE 107
>gi|195108851|ref|XP_001999006.1| GI24277 [Drosophila mojavensis]
gi|193915600|gb|EDW14467.1| GI24277 [Drosophila mojavensis]
Length = 557
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 154/606 (25%), Positives = 291/606 (48%), Gaps = 83/606 (13%)
Query: 29 VVQVLDLKL--TGN----RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
V+Q+L+++ TGN RY SDG+ +L L++E+ +Q++GL+
Sbjct: 10 VLQILNVQKLNTGNPDEDRYRITLSDGEYYHTCVL---LATEL--NKMQHRGLL------ 58
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVK-KDGPGIVLK 141
SE ++ + A ++ E+ DE ++ E EVK K G + +
Sbjct: 59 -------SENTIVRLNKYSIDMAGRGGVRPEIIVDEITVL---NSEYEVKTKIGEPVTYE 108
Query: 142 --PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNM 199
KQ + +A + +Q+ N + V P+ L+PY+ W IK RV+ K +
Sbjct: 109 NAAKQITAPEVSALAISNQSCNQ-------INEEVIPIAHLSPYKHKWIIKARVSGKTRI 161
Query: 200 RTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+YK R +FN+ L D+ G +I+ T F + KF+ G VY+I+ G ++ AN Q
Sbjct: 162 FSYKGGR----LFNMNLFDKSG-EIRVTAFKDQCDKFHSLIDDGNVYFIANGWIKPANTQ 216
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNV 319
+ ++N++EM + V + ++ IP+ KF+ +P+ + N E V+ IG+ V
Sbjct: 217 YSQLKNEFEMIFIGETMV-QLCDDNGDIPEVKFDLIPLSHVSNMGN-KEAVNTIGICTEV 274
Query: 320 SPT-MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
+ I K+N E KR++T+ D + VT++LW + A N + ++ +K
Sbjct: 275 GKLDIRISTKTNKEF-KKRELTLVDMSNAAVTLTLWGDEAVNFDGHV------QSVILVK 327
Query: 379 SLKV---GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
+V GD++ SL+ ST+ ++PD+PEA KL+ W+++ G +++ L +L
Sbjct: 328 GSRVNEYGDWK--SLNVGWGSTLKINPDIPEAHKLRVWFDNGGADNIVSARRVELMTLKD 385
Query: 436 NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT 493
R++ S GD +P +F A + + A +Y+AC CNKKV
Sbjct: 386 AYFRNLGS--------------GD-RPDYFQCIAIVQNVIQTNA-FYKACPQMNCNKKVV 429
Query: 494 DALGSGYWCEGCQKNDEECSLRYIMVA--RVCDGSGEAWISIFNEEAERIIGCSADELNE 551
D Y CE C + +YI+ ++ D + + + F + E+++ + E+ E
Sbjct: 430 DVGDGLYRCESCDAVSP--NFKYILRVKIKISDYTSDREVICFGKIGEQLLRHTTQEVVE 487
Query: 552 LKSQLGDDNSYQMKL-KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFL 610
L +D + +++ ++ + ++ ++S + YN + +TV+++ P + +K L
Sbjct: 488 ---ALENDPARALQIFTDINYTLYIFKLSCKNKLYNGKMISTLTVQSMTPFNCKKYNKHL 544
Query: 611 LEEISK 616
+ EI++
Sbjct: 545 INEINQ 550
>gi|290982322|ref|XP_002673879.1| replication protein A1, 70 kDa-like protein [Naegleria gruberi]
gi|284087466|gb|EFC41135.1| replication protein A1, 70 kDa-like protein [Naegleria gruberi]
Length = 691
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 241/490 (49%), Gaps = 64/490 (13%)
Query: 156 RDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
R GN+ P T+++ PLV + P+ +W IKVRVT KG ++ + N EG +F++E
Sbjct: 228 RQSVGNVGPLK----TKQILPLVGITPWVSDWVIKVRVTKKGELKKWSNPTKEGHLFSLE 283
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DEDG +I+AT F KFYD + KVY++ G + A+K++ + + YE+ +NS
Sbjct: 284 LIDEDGVEIRATFF---TNKFYDHIKESKVYFMKGGKAKSADKKYSRLPHSYELTFYDNS 340
Query: 276 EVEEAVNETA-FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNV--SPTMSIRRKSN-- 330
+EEA ++ A IPQ F F+P ++L + + VDI+GVV+++ S M+I+ K +
Sbjct: 341 VIEEAEDDQAKNIPQGHFEFIPFEQL-KTIEKKNGVDIVGVVKSIGNSEQMTIKSKQDPN 399
Query: 331 --NEMVPKRDITVA----DETKRTVTVSLWNE--LATNVGQELLDNADKSPIVAIKSLKV 382
+ KR++ + D ++LW E ++ N+G ++ A + IK K
Sbjct: 400 AIEKQTTKRELILINKDNDGNIYEAAITLWGEDNISFNIGDTVIFTA-----LTIKEFK- 453
Query: 383 GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES------EGKGTSMASIGSGLGSLAKN 436
G+ LST + +L + DLPE++++ + + E KG +++I S GS K
Sbjct: 454 ---GGVKLSTSKSTKILTNFDLPESRRVMEQFANLETPIEEIKGVLLSAIESS-GSFKKY 509
Query: 437 GARSMYSDRVSLTHITSNPSLGDEK---PVFFSIKAYISLIKPDQAMWYRAC--KTCNKK 491
+ + RV L EK FF I+++ SL K D + Y AC + C K
Sbjct: 510 SLEDLDTVRVQ--------DLEQEKFKSKTFF-IRSHFSLFK-DGNLTYCACVNEECKSK 559
Query: 492 VT--DALGSGYWCEGCQ-KNDEECSLRYIMVARVC-DGSGEAWISIFNEEAERIIGCSAD 547
D + + Y C C K DE + M + V D + ++ F++ ++G A
Sbjct: 560 KLKRDEMDNSYTCPLCNTKYDETTAAHKYMTSVVLGDHTCTKTLTAFDKGMTLLLGVPAG 619
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK--RQRVTVRAVAPVDFAA 605
+ L + D+ + K T+ ++R V + NNE+ + R + + ++A
Sbjct: 620 DFYALDDRTKDEYKSIAQSKIATY---MVRAGV---QNNNEQGPQVRFSFVGLKEPEWAK 673
Query: 606 ESKFLLEEIS 615
E+K L I+
Sbjct: 674 EAKGCLGTIN 683
>gi|260793785|ref|XP_002591891.1| hypothetical protein BRAFLDRAFT_89408 [Branchiostoma floridae]
gi|229277103|gb|EEN47902.1| hypothetical protein BRAFLDRAFT_89408 [Branchiostoma floridae]
Length = 265
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 134/270 (49%), Gaps = 16/270 (5%)
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
+ V ++LW A + SP+VAIK ++ DF G SLST+G ST++++PD+PE
Sbjct: 4 KQVNLTLWGGEADKF------DGSSSPVVAIKGARLSDFGGRSLSTVGSSTIMINPDIPE 57
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
A +L+ WY+ G SI +G G G ++ S + EKP FF+
Sbjct: 58 AYQLRGWYDKVGCNAEAQSISTGAG-----GGAGRPTNWKSFQQVKDENLGTGEKPDFFT 112
Query: 467 IKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
K I +K + +M Y+AC T CNKKV D + CE C K R I+ A V D
Sbjct: 113 TKGTIVFLKKENSM-YQACPTQDCNKKVVDLQNGFFSCEKCSKEFPNFKYRMILSANVAD 171
Query: 525 GSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQE 584
SG W + F E AE I+G + + L LK Q DD +Y E + ++ + V
Sbjct: 172 FSGNQWTTCFQETAETILGQNTEYLGNLKDQ--DDTAYDQVFTEANFKSYIFNMRVKMDT 229
Query: 585 YNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
YN+E R R + P+DF SK L+ +I
Sbjct: 230 YNDESRIRCICNGIQPLDFKEYSKKLINDI 259
>gi|341875977|gb|EGT31912.1| hypothetical protein CAEBREN_17155 [Caenorhabditis brenneri]
Length = 1297
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 223/479 (46%), Gaps = 54/479 (11%)
Query: 143 KQEMVAKSAAQILRDQNG-----NMAPAARLA------MTRRVHPLVSLNPYQGNWTIKV 191
++ M AA++ + +NG N APA L R V P+ + + I
Sbjct: 835 RENMSNPPAAKVQKRENGEDASHNRAPAPELQRRAPSNTDRDVMPIAMITQNVYGFKING 894
Query: 192 RVTSKGNMRTY--KNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS 249
+T K +RT+ KN + VFN E+TD +G I+ FNE A Y Y+I+
Sbjct: 895 TITRKEAIRTFPPKNTK----VFNFEVTDSNGDTIRCVAFNELAESLYSTITENVSYFIT 950
Query: 250 RGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL 309
G + ANK+F +DYE+NL+ S VE + A P+ + + E+ + E
Sbjct: 951 NGKVVPANKRFNNTGHDYEINLSNVSIVEPGGDVVA-APKLNLKRISLGEIAGH--SGER 1007
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
+D++ V+ + P + + V KRD+ + DE+ R V ++LW G+E +
Sbjct: 1008 IDVLAYVEKMDPKPTEFTSKAGKTVVKRDMELIDESNRFVKLTLW-------GEEAIKAD 1060
Query: 370 DKSPIVAIKS-LKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
+VA K + DF G SL T + ++ P++ +L WY++ S
Sbjct: 1061 YLHKVVAFKGVIPKKDFNGAYSLGTGYGARIIADPEISGVTELYEWYKTVKPTKPSGSSS 1120
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRACK 486
++A G + M GD EK F S+KA I+ I P+ A+ Y+ C
Sbjct: 1121 EAPRTIA--GLQKM--------------QFGDSEKGDFASVKAMITRINPNTAL-YKGCS 1163
Query: 487 T--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
+ C KKV + L + CE C K Y+M + D +G+ +++ F + A +++G
Sbjct: 1164 SEGCQKKVIE-LDGEFRCEKCNKTMRHFKWLYMMQFELSDETGQVYVTAFGDNATKVVGR 1222
Query: 545 SADELNELK-SQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVD 602
+A E+ ELK ++ G+ N+ KLK +V + R+ + YN E RQ++TV V V+
Sbjct: 1223 TAAEVGELKETKPGEYNAVFEKLK---FVSKMWRLRCKMETYNEEVRQKMTVFGVEEVN 1278
>gi|449527292|ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 151/279 (54%), Gaps = 17/279 (6%)
Query: 347 RTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
R+V ++LW GQ L + D P++A+KS +V DF G ++ T+ S + + PD
Sbjct: 1 RSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDF 60
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
PEA L+ W+E EG+ T SI + S+ + R +++ I EKP +
Sbjct: 61 PEAHSLREWFEREGRSTLSVSISREVASVGRTDVRK------TISQIKDERLGTSEKPDW 114
Query: 465 FSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYW-CEGCQKNDEECSLRYI 517
++ A +S IK D + Y AC + C+KKVT+ G G W C+ C ++ +EC RYI
Sbjct: 115 ITVSATVSFIKVD-SFCYTACPIMIGDRQCSKKVTNN-GDGKWRCDRCDQSVDECDYRYI 172
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ ++ D +G W++ F E E I+G A L LK + DD + +++V + +++
Sbjct: 173 LQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMK 232
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + ++ +++E+R R TV ++F++ES+FLL + K
Sbjct: 233 LKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEK 271
>gi|297736414|emb|CBI25137.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 88/112 (78%)
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
E ++YIMV +V D SGEA +++FNE+AERI GCSADEL++LKSQ G++N +Q KLKE
Sbjct: 4 ESIRIQYIMVVKVSDDSGEACLALFNEQAERIFGCSADELDKLKSQEGEENRFQQKLKEA 63
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQ 621
WVPHL R+SVAQ EY NEKRQ +T RAV VDFAAES+ LLEEISK + Q
Sbjct: 64 IWVPHLFRISVAQHEYMNEKRQWITARAVVAVDFAAESRLLLEEISKMKTSQ 115
>gi|145514039|ref|XP_001442930.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410291|emb|CAK75533.1| unnamed protein product [Paramecium tetraurelia]
Length = 633
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 220/451 (48%), Gaps = 39/451 (8%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
L P + IK R+TSK ++ +KN G+G +F +E+ D D IQ FN+ KFYD
Sbjct: 210 LYPGMRGFKIKGRITSKTDITQFKN--GKGYLFTIEIIDSDKQTIQGVFFNKLCDKFYDF 267
Query: 240 FQLGKVYYISRGTLRVANKQFKTV-QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+GKVYY +++ K Q+DY+++ + S++ A ++ I + I+
Sbjct: 268 IDIGKVYYFENASVKTNRYSSKNQNQSDYQIHFEDFSKISIAQDDEE-IDTFAYQIKTIE 326
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
++ ++ E D++GV+ ++ PT I KS NE K++IT+ D+T+R + + LW + A
Sbjct: 327 DVDN-LSLDEKCDVLGVIIDIKPTTQIMTKS-NENRSKKNITLYDQTQRGIDIVLWGQQA 384
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL---KSWYE 415
K IVA + LK+ D+Q + T+ ST+ +L KK+ + +YE
Sbjct: 385 EKW------QFQKDEIVAFRGLKISDYQMVRNLTVTNSTIY-EKNLSNLKKINGFQEFYE 437
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI----TSNPSLGDEKPV-FFSIKAY 470
K L + K + + L++I + + K V F+ IKAY
Sbjct: 438 FYSKNKDF------LETKPKESRK-----KFPLSYIEQIKKDFEGIRNIKFVKFYEIKAY 486
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSG-YWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
I+ I + ++Y C+ C +KV + Y C+ C +N ++ S +Y+ A++ D +G
Sbjct: 487 ITNIFT-KLLYYEGCENCKRKVVYIQQTKLYHCQSCNQNFDQPSYKYMFNAKIADTTGNL 545
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
+S+ N++ ++I+ S DE + KSQ+ DN +K + + + YN+E
Sbjct: 546 SVSVANDQGQQILQLSCDEFQK-KSQVDKDNY----VKRANFQQFRFLIIGKVETYNDEI 600
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISKKVSH 620
R R + D ++++ L +I + +S
Sbjct: 601 RPRYYISTFIQDDIVSDNEELYNQIKQMLSQ 631
>gi|240274193|gb|EER37711.1| replication factor A 1 [Ajellomyces capsulatus H143]
Length = 541
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 164/308 (53%), Gaps = 16/308 (5%)
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
+D+IGV+++V I K+ ++ KRD+T+ D T +V +++W +A D+
Sbjct: 241 IDVIGVLKDVGELSQILSKTTSKPYDKRDLTLVDNTGYSVRLTVWGNIAKE-----FDSV 295
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+S +VA K +KV DF G SLS L ++ V PD+ +A KLK WY+++G+ + AS S
Sbjct: 296 PES-VVAFKGVKVSDFNGRSLSLLSSGSMTVDPDIEDAHKLKGWYDAQGRSETFASHDS- 353
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT- 487
+ + A G R+ + H +LG EKP +FS+KA + +K D M Y AC T
Sbjct: 354 MNNAAGFGDRASSFKTIVQVH---EGNLGMSEKPDYFSVKATVVYVKQD-TMAYPACLTD 409
Query: 488 -CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
CNKKV + CE C ++ RYI+ VCD +G W+S F+E + I+G SA
Sbjct: 410 KCNKKVLQDENGQWRCERCDQSFPHPEYRYILSVNVCDHTGALWLSCFDEVGKIILGTSA 469
Query: 547 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
+EL ELK D+ +Y+ ++ + +++R R V +V+ +D++ E
Sbjct: 470 NELMELKEN--DERAYEELVQRANCRAWNFNCRAKMDNFQDQQRVRYQVSSVSAIDYSVE 527
Query: 607 SKFLLEEI 614
S L E I
Sbjct: 528 SARLAELI 535
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 22/239 (9%)
Query: 9 AISTILSNPSPDSSSDIPEIVVQVLDLKL------TGNRYMFNASDGKKRLKAILPSNLS 62
A+S I DS I E VVQ + +K + R+ SD ++ +L + +
Sbjct: 12 ALSAIFD----DSKPKIAEPVVQCVQVKPLPPQPNSPERFRAVFSDITNYVQTMLGTQAN 67
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGII 122
V SG + +RL + N I K ++ LI+ EV+ E KI D +
Sbjct: 68 HYVTSGQLVRGCFVRLKSFQANMI--KGKRILIIFDLEVLDRLGICEKKI---GDPQPLD 122
Query: 123 FKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNP 182
K +++D+ I S Q AA ++P+ +L+P
Sbjct: 123 TKQEEQDKT------IPTTISSNGFYGSRGPQQPPQQPAQRSAAAATAHANIYPIEALSP 176
Query: 183 YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQ 241
Y WTIK R T+K ++T+ N GEG +F+V L D+ G +I+AT F + Y F+
Sbjct: 177 YSHKWTIKARCTNKSAIKTWHNKNGEGKLFSVNLLDDSG-EIRATAFKDQCDSLYGVFE 234
>gi|209880341|ref|XP_002141610.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
gi|209557216|gb|EEA07261.1| OB-fold nucleic acid binding domain-containing protein
[Cryptosporidium muris RN66]
Length = 475
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 229/472 (48%), Gaps = 56/472 (11%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + T+K RV K RT + R + F+++L D+DG I+ + A +
Sbjct: 2 PIREVNVNRQIITLKGRVIEKS--RTLQTLRNDLKFFHIDLIDKDGDTIKVKFWRNKAEE 59
Query: 236 FYDRFQLGKVYYI--SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+Y++ + G VY + + V+N +F N YE+N +E ++ + ++ ++
Sbjct: 60 YYNKIEQGDVYIFKCTGSDVAVSNARFNNTSNPYEINFSERCKITKVEHDETISKDPQYR 119
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F+ I ++ R +N VDIIG++++ SP + + NNE +P+R+I + D+++ + V+L
Sbjct: 120 FLSIKDI-RNMNTPCTVDIIGIIKSSSPLSKVISRRNNEEIPRRNIVIVDDSEYQLNVTL 178
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL-GRSTVLVSPDLPEAKKLKS 412
W +LA+ + E+L N +P+VA K+L++ DFQG STL GRS + + K+KS
Sbjct: 179 WGDLAS-IDDEILSN---NPVVAFKNLQIRDFQGKQGSTLNGRSMIDFNLKNDRMNKVKS 234
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF-------- 464
W+ G+ T SI + + + S + +T SL + + +
Sbjct: 235 WFIEYGQTTKFQSINTTV----------IQSSNFPMDKLTLEKSLKEVRILMDENSYSSN 284
Query: 465 --FSIKAYISLI-------------KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKND 509
+S+ A IS I KP ++ Y AC C KKV L + Y CE C D
Sbjct: 285 QTYSVLARISRIGFPNSIGQNISEKKP--SLTYDACPKCKKKV---LNNSY-CEKC---D 335
Query: 510 EE--CSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKL 566
E +Y+ + D + + F+ ++ G + E +++ + ++ +
Sbjct: 336 ESVIADTKYMFPVTIEDYTSSLSVRCFHNIGSIVLSGLESSECKQMELRNDVKLNFLLGF 395
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
K + W LR+++ +EYNN+K+ + +++ +DF + +L + K+
Sbjct: 396 KYL-WQYLNLRITLRMEEYNNQKKTQAIIQSAEIIDFDLITNKMLVNLKNKL 446
>gi|66359222|ref|XP_626789.1| replication protein A1 large subunit [Cryptosporidium parvum Iowa
II]
gi|46228369|gb|EAK89268.1| replication protein A1 large subunit [Cryptosporidium parvum Iowa
II]
Length = 484
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 228/472 (48%), Gaps = 52/472 (11%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + +IK R+ K +++ K+ F++++ D+D I+ + + A +
Sbjct: 13 PIREVNVNRQTISIKGRIIQKSSLQILKSGLR---FFHLDIIDKDNDVIRVKFWRQKAEE 69
Query: 236 FYDRFQLGKVYYI--SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT-KF 292
+++ Q G VY + + + V+N +F N YE+N ++ V + N+ I + K+
Sbjct: 70 YHNILQHGSVYILKCTGNDVVVSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPKY 129
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F + ++ R + +VD+IG+V++ SP+ + + NN+ V +R I+V D+T + ++
Sbjct: 130 VFTTVKDI-REIPVPSIVDLIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINIT 188
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL-GRSTVLVSPDLPEAKKLK 411
LW ELA ++ L N P+VA+KS+++ ++QG STL GRS + S D + ++L+
Sbjct: 189 LWGELAEVSDEKFLGN----PVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKMEELR 244
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGAR---SMYS--------DRVSLTHITSNPSLGDE 460
WY+S G SI + + + N R +YS +R+ +S PS
Sbjct: 245 DWYDSIGSSIKFESISNISSNESPNNFRVNDKLYSGRTLKDIRNRMEDNEFSSTPS---- 300
Query: 461 KPVFFSIKAYISLI-----------KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKND 509
F + A IS I ++ Y AC C KKV L S +CE C D
Sbjct: 301 ----FQVIARISKIGSINVNQQVSGDKGGSLTYDACPICKKKV---LFSTSYCEKC---D 350
Query: 510 EEC--SLRYIMVARVCDGSGEAWISIFNEEAERIIG-CSADELNELKSQLGDDNSYQMKL 566
E +++ + D + + F+E I SA E++ ++ + L
Sbjct: 351 ESVVPETKFLFPVTIEDHTCSLTVQCFHEIGSTFIKELSASACKEMEQNNDKKLNFILNL 410
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ W + L++ + +EYNN+K+ R +++ P+D S +LE IS+ +
Sbjct: 411 -QCMWRHYNLKIQLKAEEYNNQKKTRAIIQSAEPIDLNQISYLMLESISQSI 461
>gi|72168826|ref|XP_786722.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Strongylocentrotus purpuratus]
Length = 305
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 162/309 (52%), Gaps = 17/309 (5%)
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLD-NA 369
++IGV ++ S ++ KS+N V KR + + D++++ V+++LW G+E D +
Sbjct: 3 NVIGVCKSTSDLTAVTIKSSNREVNKRSLQLVDDSQKEVSLTLW-------GKEAEDFDG 55
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSG 429
+P++A+K ++ F G SLS L S V+PD+P+A LK W++SEG SI +
Sbjct: 56 SGNPVIAVKGARLSGFGGRSLSVLQNSIFQVNPDIPKAHHLKGWFDSEGHSQDSQSISTR 115
Query: 430 LGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMWYRACKT- 487
GS GA + + H +LG EKP +F++K I ++ + M Y AC +
Sbjct: 116 QGSGGGGGANTNW----MTFHDVHAQNLGQGEKPDYFTVKGTILFVRKENCM-YMACPSA 170
Query: 488 -CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
CNKKV++ Y CE C K+ E R ++ A V D + W + F E AE+++ SA
Sbjct: 171 ECNKKVSENGDGSYRCEKCSKDYENFKYRLLLSANVADSTDNQWATCFQETAEQLLLKSA 230
Query: 547 DELNELKSQ-LGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
EL LK Q + + ++ ++ ++ R+ + + YN E R + T + P++
Sbjct: 231 QELGSLKDQGEATEKEFNQVFQDACFIDYMFRMRIKMETYNEEARLKCTCVSAQPINVRD 290
Query: 606 ESKFLLEEI 614
+ L+++I
Sbjct: 291 YTNKLIKDI 299
>gi|145514786|ref|XP_001443298.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410676|emb|CAK75901.1| unnamed protein product [Paramecium tetraurelia]
Length = 632
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 40/456 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ L P + IK R+TSK + +K+ +G+ +F++E+ D + + IQ FN KF
Sbjct: 206 ITELYPGMRGFKIKGRITSKSDKTQFKSGKGQ--LFSIEIIDSEKSTIQGVFFNNQCDKF 263
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTV-QNDYEMNLNENSEVEEAVNET---AFIPQTKF 292
YD LGKVYY G ++ K Q++Y+++ E S++ EA+ + AF Q K
Sbjct: 264 YDLIDLGKVYYFENGQVKTNRYSSKNQNQSEYQIHFEEASKISEALEDKEIDAFPFQIK- 322
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
ID L + + DI+GV+ V P + KSN E K++IT+ D+T+R + +
Sbjct: 323 QIGDIDNLSQ----DDKCDILGVITEVKPLTQVTTKSN-ENKAKKNITLFDQTQRGIDIV 377
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW A K IVA + LKV D+Q I T+ ST DL + +K+
Sbjct: 378 LWGAQAEKW------QFQKDEIVAFRGLKVTDYQTIRSLTVTNSTTY-EKDLTKLQKING 430
Query: 413 W-----YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+ + S+ K + A + + D ++ F+ +
Sbjct: 431 FQDFYDFYSQNKDFIESKPKESKKKFALSYIEQIKKD--------FEGQRNNKLTKFYEV 482
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSG-YWCEGCQKNDEECSLRYIMVARVCDGS 526
+AYI+ I + ++Y C C +KV + ++C+ C +N + S +YI A++ D +
Sbjct: 483 RAYITTIFT-KLLYYEGCDICKRKVVLVQSTKQFFCQNCNQNFNKPSYKYIFNAKIADTT 541
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
G +S+ N++ + I+ S DE + D+ +K ++ + + + YN
Sbjct: 542 GNLPVSVSNDQGQSILKLSCDEFKAKEKNQQDE-----IIKRASFQQYRFLIIGKMETYN 596
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQN 622
+E R R + ++ D ++++ L +I K++ +QN
Sbjct: 597 DESRPRFQISSIIQDDVVSDNEELYNQI-KQMLNQN 631
>gi|5326840|gb|AAD42062.1|AF132307_1 replication protein A large subunit [Cryptosporidium parvum]
Length = 473
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 227/472 (48%), Gaps = 52/472 (11%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + +IK R+ K +++ K+ F++++ D+D I+ + A +
Sbjct: 2 PIREVNVNRQTISIKGRIIQKSSLQILKSGLR---FFHLDIIDKDNDVIRVKFWRXKAEE 58
Query: 236 FYDRFQLGKVYYI--SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT-KF 292
+++ Q G VY + + + V+N +F N YE+N ++ V + N+ I + K+
Sbjct: 59 YHNILQHGSVYILKCTGNDVVVSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPKY 118
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F + ++ R + +VD+IG+V++ SP+ + + NN+ V +R I+V D+T + ++
Sbjct: 119 VFTTVKDI-REIPVPSIVDLIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINIT 177
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL-GRSTVLVSPDLPEAKKLK 411
LW ELA ++ L N P+VA+KS+++ ++QG STL GRS + S D + ++L+
Sbjct: 178 LWGELAEVSDEKFLGN----PVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKMEELR 233
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGAR---SMYS--------DRVSLTHITSNPSLGDE 460
WY+S G SI + + + N R +YS +R+ +S PS
Sbjct: 234 DWYDSIGSSIKFESISNISSNESPNNFRVNDKLYSGRTLKDIRNRMEDNEFSSTPS---- 289
Query: 461 KPVFFSIKAYISLI-----------KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKND 509
F + A IS I ++ Y AC C KKV L S +CE C D
Sbjct: 290 ----FQVIARISKIGSINVNQQVSGDKGGSLTYDACPICKKKV---LFSTSYCEKC---D 339
Query: 510 EEC--SLRYIMVARVCDGSGEAWISIFNEEAERIIG-CSADELNELKSQLGDDNSYQMKL 566
E +++ + D + + F+E I SA E++ ++ + L
Sbjct: 340 ESVVPETKFLFPVTIEDHTCSLTVQCFHEIGSTFIKELSASACKEMEQNNDKKLNFILNL 399
Query: 567 KEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
+ W + L++ + +EYNN+K+ R +++ P+D S +LE IS+ +
Sbjct: 400 -QCMWRHYNLKIQLKAEEYNNQKKTRAIIQSAEPIDLNQISYLMLESISQSI 450
>gi|340378782|ref|XP_003387906.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Amphimedon queenslandica]
Length = 256
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 128/247 (51%), Gaps = 15/247 (6%)
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS 432
P+VA+KS+++ DF G+SLS L ST+L +PDLPEA +LK WY+ GK + S+ S
Sbjct: 15 PVVALKSVRLSDFNGVSLSALASSTILTNPDLPEAHQLKGWYDHHGKDQDVTSLSS---- 70
Query: 433 LAKNGARSMYSDRVSLT--HITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KT 487
A +SD LT I LG EKP +FS K I +K + + Y AC +
Sbjct: 71 ---RNATGSFSDSAFLTFRQIKELNQLGQQEKPDYFSCKGMIVYLKKENCL-YTACPSQD 126
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y+CE C K+ R IM D W+ F+E I+G
Sbjct: 127 CNKKVNDDGTGNYFCEKCGKSYPSFKYRMIMKLNCVDYLDNCWLDTFHEGGSAIVGMDGQ 186
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
+L EL+ Q D + ++E + + RV YN+E+R R + +V PV++A E+
Sbjct: 187 KLGELREQ--DAAQFDNIMQEAYFKEFIFRVRAKVDTYNDEQRLRCSCVSVQPVNYATET 244
Query: 608 KFLLEEI 614
K L++ I
Sbjct: 245 KRLIKMI 251
>gi|340386214|ref|XP_003391603.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Amphimedon queenslandica]
Length = 251
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 127/247 (51%), Gaps = 15/247 (6%)
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS 432
P+VA+KS+++ DF G+SLS L ST+L +PDLPEA +LK WY+ GK + S+ S
Sbjct: 10 PVVALKSVRLSDFNGVSLSALASSTILTNPDLPEAHQLKGWYDHHGKDQDVTSLSS---- 65
Query: 433 LAKNGARSMYSDRVSLT--HITSNPSLG-DEKPVFFSIKAYISLIKPDQAMWYRAC--KT 487
A +SD LT I LG EKP +FS K I +K + + Y AC +
Sbjct: 66 ---RNATGSFSDSAFLTFRQIKELNQLGQQEKPDYFSCKGMIVYLKKENCL-YTACPSQD 121
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
CNKKV D Y+CE C K+ R IM D W+ F+E I+G
Sbjct: 122 CNKKVNDDGTGNYFCEKCGKSYPSFKYRVIMKLNCVDYLDNCWLDTFHEGGSAIVGMDGQ 181
Query: 548 ELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
+L EL+ Q D + ++E + + RV YN+E+R R + V PV++A E+
Sbjct: 182 KLGELREQ--DAAQFDNIMQEAYFKEFIFRVRAKVDTYNDEQRLRCSCVTVQPVNYATET 239
Query: 608 KFLLEEI 614
K L++ I
Sbjct: 240 KRLIKMI 246
>gi|294875668|ref|XP_002767427.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
gi|239868994|gb|EER00145.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
Length = 577
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 161/279 (57%), Gaps = 4/279 (1%)
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
P + + + P+ L+ Y WTIK RV+SK ++RT+ NARGEG +F++EL D+
Sbjct: 301 GPVSYRPVASDIIPISQLSVYSQKWTIKGRVSSKSDVRTFVNARGEGQLFSIELVDDQNG 360
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+AT FN A KFY Q G+VY S+G ++ AN +F YE+ N+++ +EEA N
Sbjct: 361 EIRATFFNSAVTKFYPAIQQGRVYTFSKGQVKQANARFNP-GAAYELTFNDDAIIEEA-N 418
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
++A IP+ + I + + N E VD+ G++ + +P +I ++ + +R+ T+
Sbjct: 419 DSADIPRILYKISKIATI-QDRNADEFVDLCGIITHCAPISTIVVRNTGQERARRNFTIV 477
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D++ ++ +++W E A N G + + P+V IK+ ++ ++ G SL+T +T+ V P
Sbjct: 478 DDSGCSIEMTVWGETAQNCGVD-ENRVQYHPVVMIKNARISNYGGKSLTTASTTTLEVDP 536
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
D A ++K+W+ G+ ++ ++ SG G N +++
Sbjct: 537 DDSRAFEVKNWWLQGGQTGAVQALSSGGGGAGGNAPKTV 575
>gi|260793787|ref|XP_002591892.1| hypothetical protein BRAFLDRAFT_89409 [Branchiostoma floridae]
gi|229277104|gb|EEN47903.1| hypothetical protein BRAFLDRAFT_89409 [Branchiostoma floridae]
Length = 256
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 140/255 (54%), Gaps = 18/255 (7%)
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVV-SPALEMEIKIEV 114
+L + +S V S +Q +IRL Y N I + + LI+ + +V+ +P +++ V
Sbjct: 1 MLATQQNSLVHSQKLQQNCVIRLEKYICNTI-QDNRRVLIMLEVQVLGNPGNKIKNPTPV 59
Query: 115 KSDESGIIFKPKQEDEV---------KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPA 165
G P Q + PG +P Q S N+ +
Sbjct: 60 NQTGGGTAPAPVQNGGAAHAVNGGMNRSGNPGAGARPNQGAAGSSFYG-----RSNVTAS 114
Query: 166 ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
+ P+ LNPYQ WTI+ RVT+KG++RT+ NARGEG +F+++L DE G +I+
Sbjct: 115 PGTPGRGKPTPIAGLNPYQNRWTIRARVTNKGSIRTWNNARGEGKLFSMDLLDESG-EIR 173
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETA 285
AT FN+ KFYD ++GKVY+ S+G+L+ ANKQ+ ++QNDYEM+ N ++ V +E A
Sbjct: 174 ATAFNDQCDKFYDLIEIGKVYFFSKGSLKTANKQYTSIQNDYEMSFNNDTTVVLCEDE-A 232
Query: 286 FIPQTKFNFVPIDEL 300
+P ++NFVPI++L
Sbjct: 233 DLPSIQYNFVPIEKL 247
>gi|294875666|ref|XP_002767426.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
gi|239868993|gb|EER00144.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
Length = 582
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 161/279 (57%), Gaps = 4/279 (1%)
Query: 163 APAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT 222
P + + + P+ L+ Y WTIK RV+SK ++RT+ NARGEG +F++EL D+
Sbjct: 306 GPVSYRPVASDIIPISQLSVYSQKWTIKGRVSSKSDVRTFVNARGEGQLFSIELVDDQNG 365
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+AT FN A KFY Q G+VY S+G ++ AN +F YE+ N+++ +EEA N
Sbjct: 366 EIRATFFNSAVTKFYPAIQQGRVYTFSKGQVKQANARFNP-GAAYELTFNDDAIIEEA-N 423
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
++A IP+ + I + + N E VD+ G++ + +P +I ++ + +R+ T+
Sbjct: 424 DSADIPRILYKISKIATI-QDRNADEFVDLCGIITHCAPISTIVVRNTGQERARRNFTIV 482
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D++ ++ +++W E A N G + + P+V IK+ ++ ++ G SL+T +T+ V P
Sbjct: 483 DDSGCSIEMTVWGETAQNCGVD-ENRVQYHPVVMIKNARISNYGGKSLTTASTTTLEVDP 541
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
D A ++K+W+ G+ ++ ++ SG G N +++
Sbjct: 542 DDSRAFEVKNWWLQGGQTGAVQALSSGGGGAGGNAPKTV 580
>gi|344235409|gb|EGV91512.1| Replication protein A 70 kDa DNA-binding subunit [Cricetulus
griseus]
Length = 209
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+AT FNE KF+ ++ KVYY S+GTL++ANKQF V+NDYEM N + V
Sbjct: 27 EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPC-E 85
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ +P +F+F I +L + LVDIIG+ ++ + I KS+N V KR+I +
Sbjct: 86 DGHHLPTVQFDFTGISDL-ESKSKDSLVDIIGICKSYEDSTKITVKSSNREVAKRNIYLM 144
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D + + VT +LW E A + + P++AIK +V DF G SLS L ST++V+P
Sbjct: 145 DMSGKVVTATLWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNP 198
Query: 403 DLPEAKKLKSW 413
D+PEA KL+ W
Sbjct: 199 DIPEAYKLRGW 209
>gi|307193861|gb|EFN76495.1| Replication protein A 70 kDa DNA-binding subunit [Harpegnathos
saltator]
Length = 489
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 227/441 (51%), Gaps = 59/441 (13%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
IK RVT+K +++ +KN +G+ +F++ L D + +I+ FN+ K Y+ + KVY+I
Sbjct: 91 IKARVTNKSSIKEWKNKKGK--LFSMHLHD-NSDEIKCVAFND---KLYNNVENNKVYHI 144
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGT 307
S L+ +++++ ++N YE+ + +++ ++E+ ++ A IP F+F PI ++ + + T
Sbjct: 145 SNYELKDSDRRYNKLKNQYEIIITDDTRIKES-HDDADIPSIHFDFCPISQVENKQIYDT 203
Query: 308 ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT---VTVSLWNELATNVGQE 364
+D++GVV V + K +NE KRDI + D ++ + + V+LW + A QE
Sbjct: 204 --IDVLGVV--VKSNLKTFTKQSNENF-KRDIDIVDNSQPSGARICVTLWGQQA----QE 254
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLG---RSTVL-VSPDLPEAKKLKSWYESEGKG 420
+ + I+AIK +V +F G L+ + RST++ PDLPEA+ L WY S
Sbjct: 255 F--DCNNGTILAIKGARVDEFNGKRLTIINSPERSTIIRKDPDLPEARVLLEWYRSYWSK 312
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAM 480
+ R++ + ITSN FF + A I I + +
Sbjct: 313 FNCT-------------FRTIRELTEATLGITSN---------FFKVMAIIDSIHIENCI 350
Query: 481 WYRAC--KTCNKKVTDALGSGYWCEGCQK---NDEECSLRYIMVARVCDGSGEAWISIFN 535
Y+AC C KK+T+ Y C+ C++ N + C L ++++ D +G ++ F+
Sbjct: 351 -YKACPKDNCKKKLTELAFEKYRCDSCKRDYLNFKYCLLLNMIIS---DITGNHRVTAFD 406
Query: 536 EEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
E AE+I+ SA EL LK D+N+Y K+ E + + + ++ ++R + T
Sbjct: 407 EVAEKILEISAQELVRLKE--NDNNAYIRKIDEAVLKRYTFYLKGIAEVFHGQRRPKYTC 464
Query: 596 RAVAPVDFAAESKFLLEEISK 616
++ P++ + L++I++
Sbjct: 465 ISIEPLNHHIYLMYFLQKINE 485
>gi|67615068|ref|XP_667409.1| replication protein A large subunit [Cryptosporidium hominis TU502]
gi|54658542|gb|EAL37178.1| replication protein A large subunit [Cryptosporidium hominis]
Length = 473
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 230/469 (49%), Gaps = 46/469 (9%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + +IK R+ K +++ K+ F++++ D+D I+ + + A +
Sbjct: 2 PIREVNVNRQTISIKGRIIQKSSLQILKSGLR---FFHLDIIDKDNDVIRVKFWRQKAEE 58
Query: 236 FYDRFQLGKVYYI--SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT-KF 292
+++ Q G VY + + + V+N +F N YE+N ++ V + N+ I + K+
Sbjct: 59 YHNILQHGSVYILKCTGNDVVVSNTKFNDTSNPYEINFSDRCFVRKVENDDDSIGKAPKY 118
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F + ++ R + +VD+IG+V++ SP+ + + NN+ V +R I+V D+T + ++
Sbjct: 119 VFSTVKDI-REIPVPSIVDLIGIVRHFSPSTKVISRKNNDEVSRRTISVVDKTGFLINIT 177
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTL-GRSTVLVSPDLPEAKKLK 411
LW ELA ++ L N P+VA+KS+++ ++QG STL GRS + S D + ++L+
Sbjct: 178 LWGELAEVSDEKFLGN----PVVALKSIQIREYQGRQGSTLNGRSNMEFSIDDGKMEELR 233
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGAR---SMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
WY+S G SI + + + N R +YS R +L I + E F S +
Sbjct: 234 DWYDSIGSSIKFESISNISSNESPNNFRVNDKLYSGR-TLKDIRNRM----EDNEFSSTQ 288
Query: 469 AY--------ISLIKPDQ--------AMWYRACKTCNKKVTDALGSGYWCEGCQKNDEEC 512
++ I I +Q ++ Y AC C KKV L S +CE C DE
Sbjct: 289 SFQVIARISKIGSINVNQQVSGDKGGSLTYDACPICKKKV---LFSTSYCEKC---DESV 342
Query: 513 --SLRYIMVARVCDGSGEAWISIFNEEAERIIG-CSADELNELKSQLGDDNSYQMKLKEV 569
+++ + D + + F+E I SA E++ ++ + L +
Sbjct: 343 VPETKFLFPVTIEDHTCSLTVQCFHEIGSTFIKELSASACKEMEQNNDKKLNFILNL-QC 401
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKV 618
W + L++ + +EYNN+K+ R +++ P+D S +LE IS+ +
Sbjct: 402 MWRHYNLKIQLKAEEYNNQKKTRAIIQSAEPIDLNQISYLMLESISQSI 450
>gi|123394470|ref|XP_001300571.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881632|gb|EAX87641.1| hypothetical protein TVAG_226230 [Trichomonas vaginalis G3]
Length = 590
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 214/450 (47%), Gaps = 30/450 (6%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGC-VFNVELTDEDGTQIQATMFNEAARKFY 237
SL+ Y N+TI RV K +KN +G + + L D+ G I+AT + + A KF
Sbjct: 156 SLSAYISNFTILARVVKK----EFKNLESKGLKILTLILADKSG-DIKATAWRDHAEKFN 210
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNFVP 296
+ + +VY I+ G + A KQ+ ++D E+ + N++ E N +T I +TKFNFV
Sbjct: 211 ELVEENQVYAITGGKVSFAKKQYNPTKHDCEITFDGNTKFELVNNADTEEIGKTKFNFVK 270
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I E+ VDI+GV ++ P+ R K+ E V R I +AD++ R + ++LW+
Sbjct: 271 ISEIDNLAKDA-TVDIVGVAIDIQPSQMKRLKTGRE-VNHRSIEIADDSDRKIELNLWDR 328
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKLKSWYE 415
++ QE +PI+ +K K+G+F G T+G + + V P D+ EA L+ WY
Sbjct: 329 -NCDLVQE-----GSNPIIVLKDAKIGEFNGRKNLTVG-TLIQVDPSDIQEANDLREWYS 381
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
+S+ ++ S G + + R+ V + I G+ +F + A I I
Sbjct: 382 GNPSLSSIKAL-SSTGGVDNSNRRTPI---VMIKTIMDENLGGNGHTDYFDVIASIYNIT 437
Query: 476 PDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA-WIS 532
P ++ +Y AC + C+ K G +CE C + RY + D +G ++
Sbjct: 438 PQRSFFYLACPNEKCSFKGLKDRDGGLFCESCGNMITDPVPRYNYKIGITDFTGTVMFVQ 497
Query: 533 IF--NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT----WVPHLLRVSVAQQEYN 586
+F E +RI+G +A E + L ++ L +VT + R+ + YN
Sbjct: 498 VFGGGENIDRIMGMNAAEFKKELESLDAEDKIAAMLDKVTNRLKGKEFMFRLKANENVYN 557
Query: 587 NEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ R V V + SK LLEEI+K
Sbjct: 558 EKSTIRFNVVNTFEVKYDTASKRLLEEIAK 587
>gi|387597110|gb|EIJ94730.1| hypothetical protein NEPG_00254 [Nematocida parisii ERTm1]
Length = 573
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 211/453 (46%), Gaps = 39/453 (8%)
Query: 172 RRVHPLVSLNPYQG-NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
R V ++ LNP+Q W IK +V SK ++R Y G VF++ +TD D ++ F
Sbjct: 146 RLVTTIIGLNPFQPITWCIKAKVVSKTSVREYTKDGRAGKVFSIIVTDGD-SKCNIIFFT 204
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
E FYD+ QL K Y I+ GTL++ANK + ++YE+ ++ + + + + +
Sbjct: 205 EFVDAFYDKIQLYKTYEITGGTLKLANKTYNEDIHEYEIFVDRSFTITQTADAVKVVKMP 264
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
K V + +L +N E+V ++ V+ +V ++ RK + + KR + V D++ T
Sbjct: 265 K-AIVKVSQLVNKIN--EVVSMLVVITSVGEIETVLRKKDQYAMKKRTLRVGDDSGETAP 321
Query: 351 VSLWNELAT---NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPE 406
+W + A ++G LL ++ ++ ++Q L R ++ +P+LPE
Sbjct: 322 FIVWEDTAAMEFSMGDILL----------LEGARITEYQNTPQIGLSRDGIISFNPELPE 371
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KLK WY K ++ S +G+ G + +V + + ++ + +
Sbjct: 372 VFKLKGWY---NKNENILQTSSSVGTRKSVGGANR---QVKIADVKTDCM------EYAT 419
Query: 467 IKAYISLIKPDQAMWYRAC--KTCNKKVTDALGS--GYWCEGCQKNDEECSLRYIMVARV 522
IK + I ++ + Y +C CNKKV + S Y+C C CS Y +
Sbjct: 420 IKCTVLFIS-EKTLMYTSCIADNCNKKVEHKIDSPEDYYCNKCDATYARCSYSYGPSLSI 478
Query: 523 CDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
D S W+S F + A + SA +LN L + D++ Y+ ++ ++ +
Sbjct: 479 SDNSSSIWVSAFGDTASVLFNNLSAVDLNNL--SVNDNDKYKEITQQSIGAEMIISIRGR 536
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ YN E + R T A+ PVD+ E LL +I
Sbjct: 537 ESTYNGEPQMRYTATAIKPVDYLEECTNLLAQI 569
>gi|387593453|gb|EIJ88477.1| hypothetical protein NEQG_01167 [Nematocida parisii ERTm3]
Length = 573
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 211/453 (46%), Gaps = 39/453 (8%)
Query: 172 RRVHPLVSLNPYQG-NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
R V ++ LNP+Q W IK +V SK ++R Y G VF++ +TD D ++ F
Sbjct: 146 RLVTTIIGLNPFQPITWCIKAKVVSKTSVREYTKDGRAGKVFSIIVTDGD-SKCNIIFFT 204
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
E FYD+ QL K Y I+ GTL++ANK + ++YE+ ++ + + + + +
Sbjct: 205 EFVDAFYDKIQLYKTYEITGGTLKLANKTYNEDIHEYEIFVDRSFTITQTADAVKVVKMP 264
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
K V + +L +N E+V ++ V+ +V ++ RK + + KR + V D++ T
Sbjct: 265 K-AIVKVSQLVNKIN--EVVSMLVVITSVGEIETVLRKKDQYAMKKRTLRVGDDSGETAP 321
Query: 351 VSLWNELAT---NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPE 406
+W + A ++G LL ++ ++ ++Q L R ++ +P+LPE
Sbjct: 322 FIVWEDTAAMEFSMGDILL----------LEGARITEYQNTPQIGLSRDGIISFNPELPE 371
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
KLK WY K ++ S +G+ G + +V + + ++ + +
Sbjct: 372 VFKLKGWY---NKNENILQTSSSVGTRKSVGGANR---QVKIADVKTDCM------EYAT 419
Query: 467 IKAYISLIKPDQAMWYRAC--KTCNKKVTDALGS--GYWCEGCQKNDEECSLRYIMVARV 522
IK + I ++ + Y +C CNKKV + S Y+C C CS Y +
Sbjct: 420 IKCTVLFIS-EKTLMYTSCIADNCNKKVEHKIDSPEDYYCNKCDATYARCSYSYGPSLSI 478
Query: 523 CDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
D S W+S F + A + SA +LN L + D++ Y+ ++ ++ +
Sbjct: 479 SDNSSSIWVSAFGDTASVLFNNLSAVDLNNL--SVNDNDKYKEITQQSIGAEMIINIRGR 536
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ YN E + R T A+ PVD+ E LL +I
Sbjct: 537 ESTYNGEPQMRYTATAIKPVDYLEECTNLLAQI 569
>gi|282931288|gb|ADB03555.1| replication protein complex A largest subunit [Tetrahymena
thermophila]
Length = 609
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 216/448 (48%), Gaps = 27/448 (6%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+L P TIKVR+T KG+++++K +G+ +F++++ D+ G + + FNE A ++
Sbjct: 170 NLQPNGQPQTIKVRITKKGDLKSFKEKQGK--LFSIDVIDKFGDECSISFFNEIAEQYDG 227
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
F++G+V + + +++V N + + D+ + +N+ S++ E IP K N I
Sbjct: 228 LFKVGQVIVLKQFSVKVNNNH-QYNKGDHTVTVNKESKIL-ICQEDPSIPMIKLNRQFIQ 285
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
++ G +L+D+I VV+ + ++ K +N+ KRDI DE+ ++LW E A
Sbjct: 286 DMQNKQKG-DLIDLIVVVKADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGETA 344
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST-VLVSPD---LPEAKKLKSWY 414
+ +A + I+ K K+G+F+ +G T + ++PD P+ +K WY
Sbjct: 345 KDY------DAKQGDIIVFKDAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQIHDVKKWY 398
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI---TSNPSLGDEKPVFFSIKAYI 471
S +++I G+ G R + S SL + N E ++ I+ I
Sbjct: 399 LSLN-SDQLSTIQKAQGN--DTGPREVTSFESSLNILKEEIKNLQTDPEMKIWKEIRGQI 455
Query: 472 SLIKPDQAMWYRACKTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAW 530
IK D ++Y AC +C KK+ A + W C C K+ E RYI+ + D + W
Sbjct: 456 MYIK-DTPLYYNACFSCKKKI--ARNNEVWTCINCNKDFNEPDSRYILSLNISDSTDTIW 512
Query: 531 ISIFNEEAERIIGCSADELN--ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
+S F+E ++I+G D + ++ G + ++ + L ++ +++ N
Sbjct: 513 VSAFDEVGQKILGVKGDVFRYADEDTEHGTETKKKLLMAAQNKEYRFLLLTKQERDQNGN 572
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + + A+ A E+K ++ + K
Sbjct: 573 ARDKTVIHAIKDFQPAYEAKKIINSLEK 600
>gi|146163802|ref|XP_001012333.2| hypothetical protein TTHERM_00106890 [Tetrahymena thermophila]
gi|146145960|gb|EAR92088.2| hypothetical protein TTHERM_00106890 [Tetrahymena thermophila
SB210]
Length = 671
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 216/448 (48%), Gaps = 27/448 (6%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+L P TIKVR+T KG+++++K +G+ +F++++ D+ G + + FNE A ++
Sbjct: 232 NLQPNGQPQTIKVRITKKGDLKSFKEKQGK--LFSIDVIDKFGDECSISFFNEIAEQYDG 289
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
F++G+V + + +++V N + + D+ + +N+ S++ E IP K N I
Sbjct: 290 LFKVGQVIVLKQFSVKVNNNH-QYNKGDHTVTVNKESKIL-ICQEDPSIPMIKLNRQFIQ 347
Query: 299 ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
++ G +L+D+I VV+ + ++ K +N+ KRDI DE+ ++LW E A
Sbjct: 348 DMQNKQKG-DLIDLIVVVKADTEVKTMILKKDNQQQSKRDIISFDESLIETEITLWGETA 406
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST-VLVSPD---LPEAKKLKSWY 414
+ +A + I+ K K+G+F+ +G T + ++PD P+ +K WY
Sbjct: 407 KDY------DAKQGDIIVFKDAKIGEFKDKKQINIGYGTQIFMNPDEQLFPQIHDVKKWY 460
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI---TSNPSLGDEKPVFFSIKAYI 471
S +++I G+ G R + S SL + N E ++ I+ I
Sbjct: 461 LSLN-SDQLSTIQKAQGN--DTGPREVTSFESSLNILKEEIKNLQTDPEMKIWKEIRGQI 517
Query: 472 SLIKPDQAMWYRACKTCNKKVTDALGSGYW-CEGCQKNDEECSLRYIMVARVCDGSGEAW 530
IK D ++Y AC +C KK+ A + W C C K+ E RYI+ + D + W
Sbjct: 518 MYIK-DTPLYYNACFSCKKKI--ARNNEVWTCINCNKDFNEPDSRYILSLNISDSTDTIW 574
Query: 531 ISIFNEEAERIIGCSADELN--ELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
+S F+E ++I+G D + ++ G + ++ + L ++ +++ N
Sbjct: 575 VSAFDEVGQKILGVKGDVFRYADEDTEHGTETKKKLLMAAQNKEYRFLLLTKQERDQNGN 634
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEISK 616
R + + A+ A E+K ++ + K
Sbjct: 635 ARDKTVIHAIKDFQPAYEAKKIINSLEK 662
>gi|339232622|ref|XP_003381428.1| replication protein ADNA-binding subunit [Trichinella spiralis]
gi|316979779|gb|EFV62518.1| replication protein ADNA-binding subunit [Trichinella spiralis]
Length = 337
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 11/212 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
PLV W I+ RVT K ++R + N RG+G +F+V+L DE G +I+AT FN+ +
Sbjct: 24 PLVVQMVCDFRWCIRARVTRKTDIRNWSNKRGDGKLFSVDLMDESG-EIRATAFNQECDR 82
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF-IPQTKFNF 294
+ Q +VY I G ++VAN+QF ++ NDYE+ + ++VE +E +P F F
Sbjct: 83 LFSVLQPKQVYLIRGGIIKVANRQFTSIDNDYELAFSSETQVEPCKDENVHKLPLLSFRF 142
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPT-MSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
V DE+ R N +L+DI+GVV+ + + R S E++ KRD+ + D+TK +T++L
Sbjct: 143 VKFDEIPR-TNRKQLIDILGVVEKIGELEHKVARASQRELL-KRDLFLIDDTKTAITLTL 200
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
W A N Q PI+A+K +++ DF
Sbjct: 201 WGNEAENFKQH------GHPIIAVKGVRISDF 226
>gi|67972174|dbj|BAE02429.1| unnamed protein product [Macaca fascicularis]
Length = 268
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 21/282 (7%)
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D + + VT +LW + A + + P++AIK +V DF G SLS L ST++ +P
Sbjct: 2 DTSGKVVTATLWGDDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANP 55
Query: 403 DLPEAKKLKSWYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD 459
D+PEA KL+ W+++EG+ G S++ + SG +++Y + + N GD
Sbjct: 56 DIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKTLYEVK------SENLGQGD 109
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
KP +FS A + ++ + M Y+AC T CNKKV D Y CE C R I
Sbjct: 110 -KPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMI 167
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ + D W++ F E AE I+G +A L ELK + ++ +++ + + + R
Sbjct: 168 LSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNANFRSFIFR 225
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
V V + YN+E R + +V V PVD+ + L+ I + S
Sbjct: 226 VRVKVETYNDESRIKASVMDVKPVDYREYGRRLVLSIRRSAS 267
>gi|378755051|gb|EHY65078.1| hypothetical protein NERG_01524 [Nematocida sp. 1 ERTm2]
Length = 569
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 46/455 (10%)
Query: 172 RRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+++ + LNP+Q W+IK +V SK +R Y G VF++ +TD + ++ F
Sbjct: 145 KKIGSIKELNPFQQKAWSIKAKVVSKTTVREYMKDGRAGKVFSIIVTDGE-SKCNIIFFT 203
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN--ETAFIP 288
E F+D+ Q+ K Y I+ G L++ANK++ +DYE+ ++ + + N +P
Sbjct: 204 EFVDGFFDKIQIYKTYEITGGALKLANKKYVEDIHDYEIFVDRSFTITPTENMLNAVKMP 263
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ E +E+V ++ V+ V ++ RK + + KR + V D++
Sbjct: 264 SVVTRISRLRE-----KMSEVVSLLVVIMTVGEIETVIRKKDQATMKKRTLKVGDDSGEA 318
Query: 349 VTVSLWNELAT---NVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDL 404
V LW E A +VG LL +++++V ++Q + + R ++ +P+L
Sbjct: 319 VPFVLWEETADMDFSVGDVLL----------LENVRVSEYQNMPQIGMARDGIISFNPEL 368
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
PE KLK WY S+A +G + + L + +N G E
Sbjct: 369 PEVFKLKGWYNKNEGTFSVAEPRKSVGRERQ---------KTKLEEVKAN---GMEYATV 416
Query: 465 FSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGS--GYWCEGCQKNDEECSLRYIMVA 520
YIS ++++ Y +C CNKKV S Y+C C + CS Y + A
Sbjct: 417 KCTILYIS----EKSVMYPSCPMDNCNKKVEHPAESPENYYCSKCDRIYTNCSQSYSVSA 472
Query: 521 RVCDGSGEAWISIFNEEAERII-GCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
+ D + W+S+F + A + A E+ +L ++ D + Y+ + + ++R+
Sbjct: 473 SIADDTSSVWLSLFGDSASVLFNNLKAVEMEDLSTE--DHDEYKKTIAKSIGEEMVIRIR 530
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ YN E + T ++ PVD+ ES LL +I
Sbjct: 531 GRETRYNGEPSIQYTAVSITPVDYLEESNNLLAQI 565
>gi|340059107|emb|CCC53482.1| putative replication factor A, 51kDa subunit, fragment, partial
[Trypanosoma vivax Y486]
Length = 317
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 176/329 (53%), Gaps = 28/329 (8%)
Query: 171 TRRVHPLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+++ P+ SL P+ G+ W I+ RVT K ++R + +G +F+ L DE + I+AT+F
Sbjct: 6 SQQFQPIDSLTPFLGSKWWIRARVTDKSDVRRWNKPTSQGKLFSFTLIDESAS-IRATVF 64
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE-TAFIP 288
N+A F G+VYY+ G ++ AN++F V NDYE+ + S++ A + ++ +P
Sbjct: 65 NDAVDIFDPLIVNGQVYYLGGGQVKNANRKFSNVNNDYEVTFDSTSQISIAQDSGSSLLP 124
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
++NFVPI L + G+ + ++ V T ++ + E+V KR++ V D T +
Sbjct: 125 MQRYNFVPIGILKKREVGSLVDVLVVVHSVDDLTTITQKSTGRELV-KRNVRVCDSTA-S 182
Query: 349 VTVSLWNELATN--VGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
V V+LWN+ A N GQ ++AI+ LKVG+F G+SLS+ +S+ V+P++ +
Sbjct: 183 VDVTLWNDEARNWTFGQ--------GTVLAIRQLKVGNFDGVSLSSTSQSSFDVNPNIAD 234
Query: 407 AKKLKSWYESEGKG-----TSMASIGSGL-GSLAKNGARSM-YSDRVSLTHITSNPSLGD 459
KKL WY S G +S+ S G+ GS G R Y D +++ + P
Sbjct: 235 TKKLAEWYISTGGRDVVSLSSLTSAAGGVGGSTLGEGYRGYKYFDDIAVEGLGRGP---- 290
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRACKTC 488
+P + ++ +K D + WY AC C
Sbjct: 291 -RPDYVDVRCTPVYLKQD-SQWYDACPQC 317
>gi|339232632|ref|XP_003381433.1| replication protein ADNA-binding subunit [Trichinella spiralis]
gi|316979773|gb|EFV62513.1| replication protein ADNA-binding subunit [Trichinella spiralis]
Length = 345
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 11/201 (5%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W I+ RVT K ++R + N RG+G +F+V+L DE G +I+AT FN+ + + Q +VY
Sbjct: 5 WCIRARVTRKTDIRNWSNKRGDGKLFSVDLMDESG-EIRATAFNQECDRLFSVLQPKQVY 63
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF-IPQTKFNFVPIDELGRYVN 305
I G ++VAN+QF ++ NDYE+ + ++VE +E +P F FV DE+ R N
Sbjct: 64 LIRGGIIKVANRQFTSIDNDYELAFSSETQVEPCKDENVHKLPLLSFRFVKFDEIPR-TN 122
Query: 306 GTELVDIIGVVQNVSPT-MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
+L+DI+GVV+ + + R S E++ KRD+ + D+TK +T++LW A N Q
Sbjct: 123 RKQLIDILGVVEKIGELEHKVARASQRELL-KRDLFLIDDTKTAITLTLWGNEAENFKQH 181
Query: 365 LLDNADKSPIVAIKSLKVGDF 385
PI+A+K +++ DF
Sbjct: 182 ------GHPIIAVKGVRISDF 196
>gi|393910678|gb|EJD75993.1| replication factor a 1 [Loa loa]
Length = 580
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 54/408 (13%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V P+ L PY NW + ++VTS +R RG+ +F+ D+ G +I+ + F + A
Sbjct: 169 VTPIKLLTPYCKNWRLCIKVTSVDEIRC---IRGQH-IFSFLAVDDGGVEIRVSAFGDIA 224
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI-PQTKF 292
+ ++YYI+R ++++AN+++ ++D E+ L +SEV + + + P+ F
Sbjct: 225 CRTATLICPEQMYYITRASVKMANRRYSRNEHDMEVVLRPDSEVTKCTDRPYILSPKVNF 284
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
FV I L +++ TE+ E + KR+I V D++ V ++
Sbjct: 285 EFVRIHNLQNFID-TEI----------------------EELQKREIQVVDDSGYYVAIN 321
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLK 411
LW + A ++ N ++A+K L V FQG ISL +L S +L P PEA L+
Sbjct: 322 LWGQKA-----KMFPNEQYQHVLAVKRLLVRCFQGTISLVSLASSKLLHDPHFPEADALR 376
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
WY K AS+ S + + + + PSL FF++ A I
Sbjct: 377 FWYSENRKSFKPASMNQV----------SSFHEHKWIKQL--KPSLDGH---FFNLTAMI 421
Query: 472 SLIKPDQAMWYRACKTCNKK-VTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
S I + A+ Y+ C TC KK + + Y C C +E Y + + D +G
Sbjct: 422 SSIFTENAV-YKGCPTCKKKLLVEKDNDLYICSKCGICNEY-KYYYTLHMELFDFTGTVH 479
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRV 578
++ F++ A+++IG ADE+ + D YQ K V + P++ R+
Sbjct: 480 VTAFDDCAQKLIGEQADEVAKFLK--FDSERYQSSFKSVLFKPYMFRL 525
>gi|71030734|ref|XP_765009.1| replication factor A protein [Theileria parva strain Muguga]
gi|68351965|gb|EAN32726.1| replication factor A protein, putative [Theileria parva]
Length = 466
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 211/455 (46%), Gaps = 30/455 (6%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M+ P+ ++ Y NWTI ++ K ++ K G+ V++ D++G I+A +
Sbjct: 1 MSNSYFPIKNITTYTSNWTILGKIVDKSPLKALK---GDNSFLFVDIVDKNGDTIRAKFW 57
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
AA K+ D + G VY S+GT+ ++NK+F T ++YE+ +S+++ + +
Sbjct: 58 GVAANKWNDLLEKGNVYTFSKGTVNLSNKKFNTTPHNYEITFTTDSKIDPSDELNDIKVE 117
Query: 290 TKFNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ FV + ++ T VDI+ V++++P +S+ N KR + V D+T
Sbjct: 118 RNYEFVTLRDIKSTSRDTPFVVDILCFVKSLTP-VSVTNTKFNRDTKKRLLYVVDDTSYE 176
Query: 349 VTVSLWNELA-TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS-PDLPE 406
+ V+LW ++ + +++LD V IK G F SL+T + S +
Sbjct: 177 LEVTLWGQMTELPIFEDILDKPVILSQVTIKEWNGGRFGQTSLNTDIKFADFQSVRNKDR 236
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS 466
L++WY+ K S S ++M S R S T + +L K F
Sbjct: 237 LSTLEAWYQ---KAMSENE------SFKTMKTQTMSSSRESYEFTTIDDALTRSKGYFIF 287
Query: 467 I----KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
I K + + +WY AC TC KKV + + + C C + LRYI+
Sbjct: 288 ICKLRKLFWKNKDGEMRLWYHACPTCLKKVVEEQENVWRCITCDDSIVTPVLRYIVSCVF 347
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNEL-KSQLGDDNSYQMKLKEVTWVPHLLRVS-- 579
D SG+ + ++++E ++++G S EL+ + K +L + + + K+ +VS
Sbjct: 348 VDFSGQLFSTVYSESGKKLLGYSEQELDAMDKEELKNTLDFDVLHKD-------FKVSGF 400
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ YN E R V + VD+A E++ LLE +
Sbjct: 401 FKNKTYNGESRNTFNVTNIEEVDYAKEAESLLERM 435
>gi|167376383|ref|XP_001733974.1| replication protein A 70 kDa DNA-binding subunit [Entamoeba dispar
SAW760]
gi|165904711|gb|EDR29890.1| replication protein A 70 kDa DNA-binding subunit, putative
[Entamoeba dispar SAW760]
Length = 588
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 210/443 (47%), Gaps = 36/443 (8%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+V P L + IK RV SK + Y +G +F+ L D+DG +I+AT FN+
Sbjct: 145 KVTPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKGNLFSFVLQDKDGAEIKATCFNDV 200
Query: 233 ARKFYDRFQLGKVYYISRGTLRVAN-KQFKTVQN-DYEMNLNENSEVEEAVNETAFIPQT 290
+ +D+ ++G+ YYI++ + +N K +++ + D +M + + + ++++ +E I
Sbjct: 201 CDEKFDQIKVGETYYITKADYKQSNGKGYRSAKMIDLDMIIGKYTIIQKSSDEVPMIS-- 258
Query: 291 KFNFVPIDELGRY-VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+ VPI +L V+ T DI + + P + + + K +T D++ V
Sbjct: 259 --SIVPIADLVESPVDAT--YDICAFLVDKGPEQTYKNEK-----AKVTLTFMDQSSYAV 309
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA-- 407
V WNE + + + + + SL++ +F+ +L+ + +L + D+ +
Sbjct: 310 EVDFWNE-----DIDKTKDMENGVVYVLTSLRLREFKYKTLTVTKATKILSNTDIEQYDE 364
Query: 408 -----KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
K ++ +EG S + ++ +D++ + +
Sbjct: 365 ASLVNKFIQEHTTTEGITVSDLRYLANETTVEFKAGDVRTADQLYCLRKLEEKTTETSED 424
Query: 463 VFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
V ++ Y ++ K D Y +C C KK+ D GS + CE CQK D + R+I+ A +
Sbjct: 425 VKANVYGYFTMFKVDSGFCYLSCPDCKKKIAD--GSTF-CEKCQK-DIQPMRRFIVRASI 480
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
D + W++IF+EE ++IIG SADE+ E+ Q D S++ K++T++ + +
Sbjct: 481 ADSTSSVWVTIFDEEMKKIIGKSADEMYEMNEQ--DSESFENLFKQLTFIECRFHLVCKK 538
Query: 583 QEYNNEKRQRVTVRAVAPVDFAA 605
EYN E R R TV + +D A
Sbjct: 539 DEYNGETRTRYTVNFIQILDSIA 561
>gi|296089493|emb|CBI39312.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 79/93 (84%)
Query: 270 NLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKS 329
+L+ EVEEA NE FIP+ KF FV I+ELG YVNG ELVD+ GVVQ+VSPTMSIRRKS
Sbjct: 64 SLHYFKEVEEASNEETFIPEAKFKFVDIEELGPYVNGKELVDVSGVVQSVSPTMSIRRKS 123
Query: 330 NNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
NNE+VPKRDIT+AD+TK++V VSLWN+ ATNVG
Sbjct: 124 NNEIVPKRDITIADKTKKSVVVSLWNDHATNVG 156
>gi|70941362|ref|XP_740979.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519062|emb|CAH80613.1| hypothetical protein PC000124.04.0 [Plasmodium chabaudi chabaudi]
Length = 360
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+ Y W IK RV SK N+R + EG VFN+EL DE G +I+ F +A K
Sbjct: 164 PINKLSQYSTKWIIKARVQSKDNIRKFYTGNKEGKVFNIELCDESG-EIKVNFFGKAVDK 222
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+YD ++GK+Y IS+G ++ ANK+F T+++D E+ L+ENS +E IP+ +NF
Sbjct: 223 WYDYLEVGKIYKISKGNIKSANKKFNTLKHDCEITLDENSILELLEENDMNIPKYIYNFY 282
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PI E+ +N LVD+IG+V + I K + K+D+ + DET T+ V+LW
Sbjct: 283 PISEIKANINTGTLVDVIGIVLSFQELNQILIKKTGQYKEKKDLMLIDETNETINVTLWG 342
Query: 356 ELA 358
E A
Sbjct: 343 ESA 345
>gi|401406884|ref|XP_003882891.1| Replication protein A, 70 kDa DNA-binding subunit, related
[Neospora caninum Liverpool]
gi|325117307|emb|CBZ52859.1| Replication protein A, 70 kDa DNA-binding subunit, related
[Neospora caninum Liverpool]
Length = 621
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 148/267 (55%), Gaps = 28/267 (10%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE----------------DGTQ 223
LN Y +W I+ RV K ++R + N RGE VF + D +
Sbjct: 207 LNSYSQDWMIRGRVADKTDLRLFANPRGESQVFAATIIDHLFEVVLGRCYVSPFVCKKGE 266
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+ + F A ++ R ++G+VY SRGT+ ANK++ ++ ++YE+ ++ + + E V++
Sbjct: 267 IRGSFFGGVAAAWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVIVE-VDD 325
Query: 284 TAFIPQTKFNFVPIDEL--GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
IP F+ V + L + G+ +VD+IG V + T S+ + E V ++++TV
Sbjct: 326 DPSIPAQIFSPVKLATLTTDESLLGS-VVDVIGFVTSFCATHSVLAR---EEVQRKEMTV 381
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLV 400
D++ VTV+LW + AT + +L + P+VAIK+L+V ++ G +SL++ RS +LV
Sbjct: 382 VDDSSAAVTVTLWEQHATALKDSVL---AERPLVAIKALRVSEYAGKVSLTSTSRSVLLV 438
Query: 401 SPD-LPEAKKLKSWYESEGKGTSMASI 426
P L +A +L++W+E+EG+ A +
Sbjct: 439 DPHGLEDADRLEAWWEAEGEKAHRARV 465
>gi|145545796|ref|XP_001458582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426402|emb|CAK91185.1| unnamed protein product [Paramecium tetraurelia]
Length = 730
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 226/446 (50%), Gaps = 36/446 (8%)
Query: 176 PLVSLNP-YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
PL +NP +Q + +V ++ T KN + +G +F +++ DE+ + A F+ AA
Sbjct: 307 PLYQINPSFQQPFRGRVVKVNEIKSYTTKNQK-DGKMFGIQVIDEENL-VSAMFFDSAAE 364
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQN----DYEMNLNENSEVEEAVNETAFIPQT 290
KF+D G+ Y S G L K + +Q ++ ++NS++ E +++ IP
Sbjct: 365 KFHDYIVQGRCYIFS-GVLVKPAKNLEQLQKIGCLPFDYTFDQNSQIIE-IDDVPGIPLN 422
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
FNFV ++ + + G+ + D++ V+++ S ++K+ +E + + V D++ + +
Sbjct: 423 TFNFVKLNSISQQKVGS-IQDVVVVIKSSSGVKEFQQKNKDEKSTRIQLGVYDDSLQEIE 481
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKK 409
++L+ LA ++ I KSLK+ ++QG SL ++++ + E K+
Sbjct: 482 ITLYGHLAQQYPYQV------GEIYMFKSLKINEYQGRKSLQNNYQTSIHFDKNQKEVKE 535
Query: 410 LKSWYES-EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
L++W ++ +GK +A S + +++ L + ++ L ++ ++
Sbjct: 536 LQNWLQNFDGK---LAEPVSKIKLISE------------LINESNKCELDQNLKIYSDVR 580
Query: 469 AYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
A + L+K ++Y++C C KKVT L S Y+C C +E RYI+ ++ D SG
Sbjct: 581 AQLVLVKNSGTLYYQSCTNCLKKVTTELDS-YFCSSCNLTLKEPKYRYILNCKIADSSGN 639
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W+S+ +++A ++I A+ L +L + G + L + + +++ +E+N+
Sbjct: 640 IWVSVGDQQANQLIDIPANLLKQLTDE-GKEKEKNEALSKSAYKEFRFKLTSKLEEFNDV 698
Query: 589 KRQRVTVRAVAPVDFAAESKFLLEEI 614
KR + V+++ P+ A+++ +L +I
Sbjct: 699 KRVKHAVQSITPIS-NADTQAILNQI 723
>gi|67468384|ref|XP_650233.1| replication factor A protein 1 [Entamoeba histolytica HM-1:IMSS]
gi|56466826|gb|EAL44846.1| replication factor A protein 1, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 588
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 213/445 (47%), Gaps = 46/445 (10%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
++ P L + IK RV SK + Y +G +F+ L D+DG +I+AT FN+
Sbjct: 145 KITPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKGNLFSFVLQDKDGAEIKATCFNDV 200
Query: 233 ARKFYDRFQLGKVYYISRGTLRVAN-KQFKTVQN-DYEMNLNENSEVEEAVNETAFIPQT 290
+ +D+ ++G+ YYI++ + +N K +++ + D +M + + + ++++ +E I
Sbjct: 201 CDEKFDQIKVGETYYITKADYKQSNGKGYRSAKMIDLDMIIGKYTIIQKSSDEVPMIS-- 258
Query: 291 KFNFVPIDELGRY-VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+ VPI +L V+ T DI + + P + + + K +T D++ V
Sbjct: 259 --SIVPIADLVESPVDAT--YDICAFLVDKGPEQTYKNEK-----AKVTLTFMDQSSYAV 309
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA-- 407
V WNE + + + + + SLK+ +F+ +L+ + +L + D+ +
Sbjct: 310 EVDFWNE-----DIDKTKDMENGVVYVLTSLKLKEFKYKTLTVTKATKILSNTDIEQYDE 364
Query: 408 -----KKLKSWYESEGKGTS-MASIGSGLGSLAKNG----ARSMYSDRVSLTHITSNPSL 457
K ++ EG S + + + K+G A +Y R L TS S
Sbjct: 365 ASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDIRTADQLYCLR-KLEEKTSETS- 422
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
+ V ++ Y ++ K D Y +C C KK+ + GS + CE CQK D + R+I
Sbjct: 423 ---EDVKANVYGYFTMFKVDNGFCYLSCPDCKKKIVE--GSTF-CEKCQK-DIQPMRRFI 475
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ A + D + W++IF+EE ++IIG SADE+ E+ Q D ++ K++T++
Sbjct: 476 VRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEINEQ--DSELFENLFKQLTFIECRFH 533
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVD 602
+ + EYN E R R TV + +D
Sbjct: 534 LICKKDEYNGETRTRFTVNFIQVLD 558
>gi|449705024|gb|EMD45158.1| replication protein 70 kDa DNAbinding subunit, putative [Entamoeba
histolytica KU27]
Length = 588
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 213/445 (47%), Gaps = 46/445 (10%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
++ P L + IK RV SK + Y +G +F+ L D+DG +I+AT FN+
Sbjct: 145 KITPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKGNLFSFVLQDKDGAEIKATCFNDV 200
Query: 233 ARKFYDRFQLGKVYYISRGTLRVAN-KQFKTVQN-DYEMNLNENSEVEEAVNETAFIPQT 290
+ +D+ ++G+ YYI++ + +N K +++ + D +M + + + ++++ +E I
Sbjct: 201 CDEKFDQIKVGETYYITKADYKQSNGKGYRSAKMIDLDMIIGKYTIIQKSSDEVPMIS-- 258
Query: 291 KFNFVPIDELGRY-VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+ VPI +L V+ T DI + + P + + + K +T D++ V
Sbjct: 259 --SIVPIADLVESPVDAT--YDICAFLVDKGPEQTYKNEK-----AKVTLTFMDQSSYAV 309
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA-- 407
V WNE + + + + + SLK+ +F+ +L+ + +L + D+ +
Sbjct: 310 EVDFWNE-----DIDKTKDMENGVVYVLTSLKLKEFKYKTLTVTKATKILSNTDIEQYDE 364
Query: 408 -----KKLKSWYESEGKGTS-MASIGSGLGSLAKNG----ARSMYSDRVSLTHITSNPSL 457
K ++ EG S + + + K+G A +Y R L TS S
Sbjct: 365 ASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDIRIADQLYCLR-KLEEKTSETS- 422
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
+ V ++ Y ++ K D Y +C C KK+ + GS + CE CQK D + R+I
Sbjct: 423 ---EDVKANVYGYFTMFKVDNGFCYLSCPDCKKKIVE--GSTF-CEKCQK-DIQPMRRFI 475
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ A + D + W++IF+EE ++IIG SADE+ E+ Q D ++ K++T++
Sbjct: 476 VRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEINEQ--DSELFENLFKQLTFIECRFH 533
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVD 602
+ + EYN E R R TV + +D
Sbjct: 534 LICKKDEYNGETRTRFTVNFIQVLD 558
>gi|407037414|gb|EKE38631.1| replication factor A protein 1, putative [Entamoeba nuttalli P19]
Length = 588
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 214/448 (47%), Gaps = 46/448 (10%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
++ P L + IK RV SK + Y +G +F+ L D+DG +I+AT FN+
Sbjct: 145 KITPFSLLTTFGSKLIIKGRVVSKNDKFKY----AKGNLFSFVLQDKDGAEIKATCFNDV 200
Query: 233 ARKFYDRFQLGKVYYISRGTLRVAN-KQFKTVQN-DYEMNLNENSEVEEAVNETAFIPQT 290
+ +D+ ++G+ YYI++ + +N K +++ + D +M + + + ++++ +E I
Sbjct: 201 CDEKFDQIKVGETYYITKADYKQSNGKGYRSAKMIDLDMIIGKYTIIQKSSDEVPMIS-- 258
Query: 291 KFNFVPIDELGRY-VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+ VPI +L V+ T DI + + P + + + K +T D++ V
Sbjct: 259 --SIVPIADLVESPVDAT--YDICAFLVDKGPEQTYKNEK-----AKVTLTFMDQSSYAV 309
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA-- 407
V WNE + + + + + SLK+ +F+ +L+ + +L + D+ +
Sbjct: 310 EVDFWNE-----DIDKTKDMENGVVYVLTSLKLKEFKYKTLTVTKATKILSNTDIEQYDE 364
Query: 408 -----KKLKSWYESEGKGTS-MASIGSGLGSLAKNG----ARSMYSDRVSLTHITSNPSL 457
K ++ EG S + + + K+G A +Y R L TS S
Sbjct: 365 ASLVNKFIQEHTTPEGITVSDLRYLANETTVEFKSGDVRTADQLYCLR-KLEEKTSETS- 422
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
+ V ++ Y ++ K D Y +C C KK+ + GS + CE CQK D + R+I
Sbjct: 423 ---EDVKANVYGYFTMFKVDNGFCYLSCPDCKKKIVE--GSTF-CEKCQK-DIQPMRRFI 475
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ A + D + W++IF+EE ++IIG SADE+ E+ Q D ++ K++T++
Sbjct: 476 VRASIADSTSSIWVTIFDEEMKKIIGKSADEMYEINEQ--DSELFENLFKQLTFIECRFH 533
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAA 605
+ + EYN E R R TV + +D A
Sbjct: 534 LICKKDEYNGETRTRFTVNFIQVLDSIA 561
>gi|156088471|ref|XP_001611642.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798896|gb|EDO08074.1| conserved hypothetical protein [Babesia bovis]
Length = 462
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 211/453 (46%), Gaps = 38/453 (8%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ ++ Y NWTIK RV K +R K G+ + +V++ D+ G I+ + +AA K
Sbjct: 6 PIKNITTYTNNWTIKARVLDKAPLRAIK---GDNHIMHVDVVDKHGDTIRVKFWGKAATK 62
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+ + + GKVY S+G + ++NK+F T + YE+ +++S+++ +E Q +
Sbjct: 63 WDEVLEKGKVYLFSKGNVELSNKKFNTTPHKYEITCHQDSQIDPVDDEGDIKMQRDHKLL 122
Query: 296 PIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ ++ T+ VD++ + V P ++I ++ E+ PKR +++ D T + + LW
Sbjct: 123 TLRDIKSMPQVTQAPVDLLCIANTVHPAVNITTRAGKEL-PKRILSIVDNTGYEMDLVLW 181
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSP-----DLPEAK 408
+ A G E ++ I+A K L V ++QG S + S V ++ D +
Sbjct: 182 GDHANMDGIEQMEG---KAIIATK-LAVKEWQGSRSCQSSQNSDVTLATQENIKDQDKLT 237
Query: 409 KLKSWYE-SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+L+SW+E ++ + S+ + + N + ++ ++ T + F +
Sbjct: 238 QLESWFENAKANNETFKSLKTQAQAAKDNYEETDIANLLTKTKGS------------FIL 285
Query: 468 KAYISLIKPDQA-----MWYRACKTCNKKVT-DALGSGYWCEGCQKNDEECSLRYIMVAR 521
+A + I MWY+AC C+KKV D + Y C C E RYI
Sbjct: 286 RAKLRKIHWKNKEGSVRMWYQACPMCSKKVVMDEDTNRYKCIACSDISVEPVPRYIFSCN 345
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
D +G+ I E E+++G SA EL + D + + T + L V
Sbjct: 346 FMDATGKINAQITAENGEKLLGKSAKELENMDP----DTLKRFCEFDATLGEYKLSGYVR 401
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
YN E R + T+ V +++ AE+ +L+++
Sbjct: 402 SNMYNGETRYQFTITRVEDMNYPAETAHMLDKM 434
>gi|355704842|gb|EHH30767.1| hypothetical protein EGK_20543 [Macaca mulatta]
Length = 267
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 22/282 (7%)
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
D +++ VT +LW E A + + P++AIK +V DF G SLS L ST++ +P
Sbjct: 2 DTSRKVVTATLWGEDADKF------DGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANP 55
Query: 403 DLPEAKKLKSWYESEG--KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
D+PEA KL+ W+++ G S++ + SG +++Y + +LG
Sbjct: 56 DIPEAYKLRGWFDAGQALDGVSISDLKSGSVGGGNTNWKTLYEVKFE--------NLGQS 107
Query: 461 -KPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
KP +FS A + ++ + M Y+AC T CNKKV D Y CE C I
Sbjct: 108 NKPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYHMI 166
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
+ + D W++ F E AE I+G +A L +LK + ++ +++ + + + R
Sbjct: 167 LSVNIADFQENQWVTCFQESAEAILGQNAAYLGDLKDK--NEQAFEEVFQNANFRSFIFR 224
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
V V + YN E R + TV V PVD+ + L+ I + S
Sbjct: 225 VRVKVETYNEESRIKATVMDVKPVDYREYGRRLVLSIRRSAS 266
>gi|296089491|emb|CBI39310.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 73/84 (86%)
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
+ +NE FIP+ KF FV I+ELG YVNG ELVD+ GVVQ+VSPTMSIRRKSNNE+VPKRD
Sbjct: 149 KGINEETFIPEAKFKFVDIEELGPYVNGKELVDVSGVVQSVSPTMSIRRKSNNEIVPKRD 208
Query: 339 ITVADETKRTVTVSLWNELATNVG 362
IT+AD+TK++V VSLWN+ ATNVG
Sbjct: 209 ITIADKTKKSVVVSLWNDHATNVG 232
>gi|401405941|ref|XP_003882420.1| replication factor-A C terminal domain-containing protein [Neospora
caninum Liverpool]
gi|325116835|emb|CBZ52388.1| replication factor-A C terminal domain-containing protein [Neospora
caninum Liverpool]
Length = 515
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 178/406 (43%), Gaps = 44/406 (10%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L +LNPY W +KVRV + ++ + KNAR F +L D G I+A + +AA ++
Sbjct: 17 LKTLNPYVVRWCLKVRVVERTDLISTKNARQ---FFTADLKDASGEVIRAVFWGDAAEQW 73
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE----TAFIPQTKF 292
+ GKVY +S+G ++VANK+F TV + YE+ +SE+ E +E TA +
Sbjct: 74 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEIVEVPDEGDISTARKLKALM 133
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I E R V D++ VV P S+ K E +R++ V D ++ + +S
Sbjct: 134 SLRDIAESKREV--PFFADVLVVVVESQPITSVVSKKTGEEFKRRNVKVVDRSQYEMEIS 191
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDL-----PE 406
LW + L+ +VA L+V ++QG ++ G+ S +L S +
Sbjct: 192 LWGNQV-----DALEGVSLPRVVAFTGLQVREWQGGRQASTGKGSEILTSLQAFAGAEKD 246
Query: 407 AKKLKSWYESEGKGTSMASIG-SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
++ L WY+ AS+ SG G L G S+ RV I D F
Sbjct: 247 SQSLLQWYKENSGTIRFASMSRSGPGDLGAAG--SLEKRRVEEKCIDEIKQKTDGAFSFI 304
Query: 466 S--------------------IKAYISLIKPDQA-MWYRACKTCNKKVTDALGSGYWCEG 504
+ P QA + Y AC +C KK+ + Y C
Sbjct: 305 GQIRRVYWRARRRGDEDRDRPMGGSQGAPDPQQAVIMYPACSSCRKKLVENGEGDYTCYA 364
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
C K+ + RY+++ D + + F ++AE ++G A+EL
Sbjct: 365 CDKSHAQADWRYMLMVNFVDHTSNVAVRCFADQAEELLGVPANELQ 410
>gi|221054360|ref|XP_002258319.1| replication protein a large subunit [Plasmodium knowlesi strain H]
gi|193808388|emb|CAQ39091.1| replication protein a large subunit, putative [Plasmodium knowlesi
strain H]
Length = 493
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 211/472 (44%), Gaps = 47/472 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + +A K+++
Sbjct: 21 ITTYVSKWIIKAKVVNKTKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSSADKWFNN 77
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
++ KVY S+G + +AN ++ TV++ YE+ NE+SE+ E ++ Q K + V + +
Sbjct: 78 IEMKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKISLVNLRD 137
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ +++ K N+ + K++I + D+TK + ++ W+
Sbjct: 138 IKIATKETPFTADLIGIVKHIGTVSNLKTKQGND-IAKQNIIIVDDTKHSFEIAFWDSNV 196
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG-RSTVLVSPDLPEAKKLK-----S 412
+ E+ +N I ++ + ++ + T G S++ +L E K K
Sbjct: 197 NLIKDEIKEN----EIYIFTNINIRNWNDMKNGTFGVTSSIEKIENLNEELKAKCTMISE 252
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFSIK 468
WY + GK T+M +I S S ++ L I+ +L G K +++ K
Sbjct: 253 WYNTNGKYEQFTNMRNILSNDVSQIPEKHYALSDVNDVLAKISGTYTLVGRVKRIYWKSK 312
Query: 469 AYISLIKPDQAMWYRACKTCNKKV-----------------TDALGSGYWCEGCQKNDEE 511
+ + +Y AC C KK+ D G Y C C +N+ +
Sbjct: 313 ------ENEHRFYYPACSKCKKKLLSSGQENVTDNDYETNANDEEGIVYSCMNCDENNVK 366
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
Y D SG I +F++E ++G A+EL L +DN + + +
Sbjct: 367 PYYNYTFNFLFMDFSGSMNIRVFSDEGYNLLGKKAEEL----KGLDEDNLNYLFNYDFLY 422
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQNA 623
+ + V V Q+ YN +R T + P + S +LL EI +S N
Sbjct: 423 KEYKVVVRVNQRLYNGIERVNFTAIKIFPQKHSDIS-YLLNEIQLLISKDNT 473
>gi|302817221|ref|XP_002990287.1| hypothetical protein SELMODRAFT_131333 [Selaginella moellendorffii]
gi|300141996|gb|EFJ08702.1| hypothetical protein SELMODRAFT_131333 [Selaginella moellendorffii]
Length = 421
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 187/392 (47%), Gaps = 31/392 (7%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + W+++ RVT KG + ++ GCV +V++ D + ++I+ F E A++
Sbjct: 2 PIKDINDHCYRWSLRARVTHKGKLVFFETGTA-GCVMSVDVADAESSEIRIVGFGENAKR 60
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ G VY S + ++ + + ++++E+ ++ E++ V + IP
Sbjct: 61 LSSEIEQGSVYIFSGNSGVQRSKPAYTPYKSNWEIKASKTMEIKR-VEDDLRIPNVVLKR 119
Query: 295 VPIDELGRYVNGTELVDIIGVV-----QNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
+ + + T VD+IG V +N+SP K + + +R + ++DE+ ++
Sbjct: 120 TSVLDASKLSQET-FVDVIGGVMWIGQKNISP------KDSGAFMRRRMLCLSDESGHSI 172
Query: 350 TVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
+ LW+ A + G E+ D + PIV +K ++ D+ G S+S G ST+LV P+L +
Sbjct: 173 DMCLWDSKAEDEGSEIEDKLGRGERPIVCVKGGRISDYNGKSISVTGGSTLLVDPELEDV 232
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+L+ W + TS + + +G +++ S+ +S+ N + + +F I
Sbjct: 233 SRLREWMVASYDTTSFVHVTNSSSKAVISGTKAV-SEMLSI-----NLKVSEFSAIFRVI 286
Query: 468 KAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
+ + D +Y AC + C KKVT S + C C + + L+Y +
Sbjct: 287 VSVKEIQTGD--FYYPACMKVVNGRQCGKKVTQVSESMWQCNSCDSDSGDIQLKYALHLC 344
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNELK 553
+ D +G W F++ A I+G A +L L+
Sbjct: 345 ILDSTGHIWAVAFDDAANEIVGMPACKLAALQ 376
>gi|225446433|ref|XP_002276442.1| PREDICTED: uncharacterized protein LOC100264432 [Vitis vinifera]
gi|302143328|emb|CBI21889.3| unnamed protein product [Vitis vinifera]
Length = 104
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 79/104 (75%)
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLR 577
MV +V D SGEA +S+FNE+AERI GCSADEL++LK Q G++ +Q K+K+ WVP+L +
Sbjct: 1 MVVKVSDDSGEAILSLFNEQAERIFGCSADELDKLKPQEGEEKRFQHKMKDAIWVPNLFQ 60
Query: 578 VSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQ 621
+ VAQ EY NEKRQ +T RAV DF AES+FLL+EISK + Q
Sbjct: 61 IIVAQHEYKNEKRQWITARAVVQDDFEAESRFLLDEISKMKTSQ 104
>gi|294876282|ref|XP_002767631.1| replication protein A large subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239869313|gb|EER00349.1| replication protein A large subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 286
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 157/286 (54%), Gaps = 18/286 (6%)
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETA-FIPQTKFNFVPIDEL-GR 302
VY S+G ++VANK++ + ++YE+ E+S++ E ++ I + K++F P+ EL +
Sbjct: 1 VYTFSKGNVKVANKRYSSCNHNYEIVFEEDSQIVEVQDDVEDHIDKIKYSFCPVRELKSK 60
Query: 303 YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
V T VD++ V+++ P ++ K+ E+ +R++TV DE+ V V+ WN+L V
Sbjct: 61 SVPST--VDLLVVIKDHRPAGTVNSKNGAELF-RRNLTVCDESGCCVDVTFWNDLVNVVD 117
Query: 363 QELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
+ +L P+VA+K + V D+ G S STL + + V+PD+PEAK+LK W+ + G +
Sbjct: 118 ESVLQT---QPVVAMKGVSVRDYGGRSCSTLNSTQIEVNPDIPEAKQLKIWWANTGCSMA 174
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS--IKAYISLIKP---- 476
++ S+ +G ++M + +++ + ++ D + S I + +
Sbjct: 175 FTNLSQQGTSVPGSGGQAMVTKEMTIAEMKNDVKNMDLGGLMHSYEIIGRLQFVTTRGRD 234
Query: 477 --DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
D ++Y AC++CN+K+ A GS +C+ C + +LR + A
Sbjct: 235 GNDIPIFYMACESCNRKM--AEGSDGFCQACNRQVRTRNLRPCLSA 278
>gi|124506649|ref|XP_001351922.1| replication factor A-related protein, putative [Plasmodium
falciparum 3D7]
gi|23504949|emb|CAD51733.1| replication factor A-related protein, putative [Plasmodium
falciparum 3D7]
Length = 484
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 206/452 (45%), Gaps = 52/452 (11%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + +A K+++
Sbjct: 13 ITTYVSKWIIKAKVVNKTKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSSADKWFNV 69
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+L KVY S+G + +AN ++ TV++ YE+ NE+SE+ E ++ Q K + V + +
Sbjct: 70 IELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKISLVNLRD 129
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ +++ K N+ + K++I + D+TK + +S W+
Sbjct: 130 IKIATKETPFTADLIGIVKHIGTVSNLKTKQGND-IAKQNIIIVDDTKHSFEISFWDSNV 188
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-----VSPDL-PEAKKLKS 412
+ +E+++N I ++ + ++ + T G ++ + ++ +L + K+
Sbjct: 189 NLIKEEIVEN----EIYIFTNINIRNWNDMKNGTFGVTSSIEKMENLNDELKAKCAKISQ 244
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFSIK 468
WY + GK T+M +I S + + S+ L+ I+ +L G K +++ K
Sbjct: 245 WYNNSGKYEQFTNMRNILSNDVTQTPDKHYSISDVSDVLSKISGTYTLIGRIKRIYWKSK 304
Query: 469 AYISLIKPDQAMWYRACKTCNKKVTDALGSG------------------YWCEGCQKNDE 510
+ + +Y AC C KK+ L SG Y C C +N+
Sbjct: 305 ------ENEHRFYYPACMKCKKKL---LSSGHDNNMDNEFDNPEEDNIVYSCMNCDENNV 355
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD-NSYQMKLKEV 569
+ Y D SG + F++E ++G A+EL L D +Y KE
Sbjct: 356 KPFYNYTFNFLFMDFSGSIILRAFSDEGYNLLGKKAEELKNLDEDTLDYLFNYDFLYKEY 415
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPV 601
V V V Q+ YN +R T + P+
Sbjct: 416 KIV-----VRVNQKAYNGIERVNFTAMKIFPL 442
>gi|389582888|dbj|GAB65624.1| replication factor A-related protein [Plasmodium cynomolgi strain
B]
Length = 485
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 210/476 (44%), Gaps = 55/476 (11%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + AA K+++
Sbjct: 13 ITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSAADKWFNN 69
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+L KVY S+G + +AN ++ TV++ YE+ NE+SE+ E ++ Q K + V + +
Sbjct: 70 IELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKISLVNLRD 129
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ +++ K N+ + K++I + D+TK + ++ W+
Sbjct: 130 IKIATKETPFTADLIGIVKHIGTISNLKTKQGND-ITKQNIIIVDDTKHSFEIAFWDSNV 188
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG-RSTVLVSPDLPEAKKLK-----S 412
+ E+ +N I ++ + ++ + T G S++ +L E K K
Sbjct: 189 NLIKDEIKEN----EIYVFTNISIRNWNDMKNGTFGVTSSIEKIENLNEELKAKCTMISE 244
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFSIK 468
WY + GK T+M +I S S + ++ L I+ +L G K +++ K
Sbjct: 245 WYNTNGKYEQFTNMRNILSNDVSQIPDKHYALSDVNDVLAKISGTYTLVGRIKRIYWKSK 304
Query: 469 AYISLIKPDQAMWYRACKTCNKKVTDALGSG--------------------YWCEGCQKN 508
+ + +Y AC C KK+ L SG Y C C +N
Sbjct: 305 ------ENEHRFYYPACTKCKKKL---LSSGQDNAPDNDYETNANDEESIVYSCMNCDEN 355
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD-NSYQMKLK 567
+ + Y D SG + F++E ++G A+EL L D +Y K
Sbjct: 356 NVKPFYNYTFNFLFMDFSGSITLRAFSDEGYNLLGKKAEELKSLDEDTLDYLFNYDFLYK 415
Query: 568 EVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQNA 623
E V V V Q+ YN +R T + P + S +LL EI +S N
Sbjct: 416 EYKVV-----VRVNQKVYNGIERVNFTAMRIFPQKHSDIS-YLLNEIQLLISKDNT 465
>gi|82594604|ref|XP_725495.1| replication protein A large subunit [Plasmodium yoelii yoelii
17XNL]
gi|23480523|gb|EAA17060.1| replication protein A large subunit, putative [Plasmodium yoelii
yoelii]
Length = 487
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 218/470 (46%), Gaps = 60/470 (12%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + +A K+++
Sbjct: 13 ITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDITDVHGDSISCKFWGSSADKWFNN 69
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+L KVY S+G + +AN ++ TV++ YE+ NE+SE+ E ++ Q + V + +
Sbjct: 70 IELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKNISLVNLRD 129
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ P +++ K N+++ K++I + D+TK + +S W+
Sbjct: 130 IKIATKETPFTADLIGIVKHICPPNNLKTKQGNDII-KQNIIIVDDTKHSFEISFWDSNV 188
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-----VSPDLPE-AKKLKS 412
+ ++L +N I ++ + ++ + T G ++ + ++ +L E +
Sbjct: 189 NLIEKDLKEN----EIYIFTNISIRNWNDMKNGTFGVTSSIEKVENLNDELKEKCLGISE 244
Query: 413 WYESEGK---GTSMASIGSG--LGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFS 466
WY + GK T+M +I S + + K+ A S +D LT I+ +L G K +++
Sbjct: 245 WYNNNGKYEQFTNMKNILSNDVIQTPDKHYALSDVND--VLTKISGTYTLVGRIKRIYWK 302
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTDALGSG---------------------YWCEGC 505
K + + +Y AC C KK+ L SG Y C C
Sbjct: 303 SK------ENEHRFYYPACTKCKKKL---LSSGQDNTQGGDYDNSNFNNEENCVYSCMNC 353
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNEL-KSQLGDDNSYQM 564
+N+ + Y D SG + F++E ++G A+EL L + L +Y
Sbjct: 354 DENNVKPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDSLDYLFNYDF 413
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
KE V V V+Q+ YN +R T + P ++ S +LL EI
Sbjct: 414 LYKEYKVV-----VRVSQKIYNGIERVNFTAMRIFPQKYSDIS-YLLNEI 457
>gi|403336688|gb|EJY67538.1| Subunit of heterotrimeric Replication Protein A (RPA) [Oxytricha
trifallax]
Length = 664
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 217/503 (43%), Gaps = 73/503 (14%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P LN +WTIK ++ K + + N RG+G + N++L D+ G+ IQAT F + K
Sbjct: 99 PFKQLNLQSQDWTIKAKILKKHEKKCWNNERGQGLLMNIDLIDQWGSTIQATFFKDGVEK 158
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF-NF 294
F + Q G VY + G ++ +N ++ + + Y + ++ + V+E + FIP N
Sbjct: 159 FENLLQEGNVYIFTCGNVKTSNSKYTNMSSKYSLAFDKQALVKECETKEKFIPMGNLENI 218
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ E+ + G + D+I V++ + T I K N + + ++ VAD+T V + +W
Sbjct: 219 KSLPEIYKLERGQK-CDVIVVIEQIGHTNFIPLK-NGGLKQRSNLIVADDTGSCVLLCIW 276
Query: 355 NELATNVGQELLDNADKSP----IVAIKSLKVGDFQGISLSTLGRSTVLVS-PDLPE-AK 408
G+E + D P ++ +++ K+ DF SL++ S + V+ P+L + +
Sbjct: 277 -------GREDIHFQDIDPRNPSVLYVRNAKISDFGRFSLNSNDESIIEVNPPNLQQKVR 329
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKN------------------GARSMYSDRVSLTH 450
+L++WY G + ++ + + +N G YS + +
Sbjct: 330 ELQNWYRQIGFKQKLKNL-TEMNEYVQNNFGFTRDLRLPFSTPNSVGGTLEYSSQQEVEQ 388
Query: 451 --ITSNPSLGDEKPVFFS----------------------------IKAYISLIKPDQAM 480
I L EK S I Y+S IK +
Sbjct: 389 KIIICKARLKPEKFKLLSELIHYLNYQIPQAEYNKQSLDQCKYKYFILGYLSKIKINDQP 448
Query: 481 WYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
+Y+AC + C KK+ G C GC K + Y A + D + + +
Sbjct: 449 YYKACPVEKCRKKM-QITAKGLECRGCLKYYDTFVPAYSFSATISDHTDSIEVQFYRCHG 507
Query: 539 ERIIGCSADELNELK--SQLGDDNSYQMK--LKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
E ++GCSA + ELK S GDDNS +++ + + + V + N E +
Sbjct: 508 EALLGCSAQKFVELKENSYYGDDNSLELQNIYNRRLYQNFTMEIQVLYTQPNQENKLSFN 567
Query: 595 -VRAVAPVDFAAESKFLLEEISK 616
+R +++++K++L ++ +
Sbjct: 568 CMRLFGEETWSSQNKYILNQLKQ 590
>gi|68077085|ref|XP_680462.1| replication factor A-related protein [Plasmodium berghei strain
ANKA]
gi|56501391|emb|CAH98106.1| replication factor A-related protein, putative [Plasmodium berghei]
Length = 514
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 216/470 (45%), Gaps = 60/470 (12%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + +A K+++
Sbjct: 41 ITTYVSKWIIKAKVVNKSKLSTFKNNNS---FFSIDITDVHGDSISCKFWGSSADKWFNN 97
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+L KVY S+G + +AN ++ TV++ YE+ NE+SE+ E ++ Q + V + +
Sbjct: 98 IELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKNISLVNLRD 157
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ P +++ K N+++ K++I + D+TK + +S W+
Sbjct: 158 IKIATKETPFTADLIGIVKHICPPNNLKTKQGNDII-KQNIIIVDDTKHSFEISFWDSNV 216
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-----VSPDLPE-AKKLKS 412
+ ++L +N I ++ + ++ + T G ++ + ++ +L E +
Sbjct: 217 NLIEKDLKEN----EIYIFTNISIRNWNDMKNGTFGVTSSIEKVENLNDELKEKCLGISE 272
Query: 413 WYESEGK---GTSMASIGSG--LGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFS 466
WY + GK T+M +I S + + K+ A S +D L I+ +L G K +++
Sbjct: 273 WYNNNGKYEQFTNMKNILSNDVIQTPDKHYALSDVND--VLAKISGTYTLVGRIKRIYWK 330
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTDALGSG---------------------YWCEGC 505
K + + +Y AC C KK+ L SG Y C C
Sbjct: 331 SK------ENEHRFYYPACTKCKKKL---LSSGQDSAQGVDYDNSNFNNEENCVYSCMNC 381
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD-NSYQM 564
+N+ + Y D SG + F++E ++G A+EL L D +Y
Sbjct: 382 DENNVKPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDF 441
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
KE V V V+Q+ YN +R T + P ++ S +LL EI
Sbjct: 442 LYKEYKVV-----VRVSQKIYNGIERVNFTAMRIFPQKYSDIS-YLLNEI 485
>gi|156097108|ref|XP_001614587.1| replication factor A-related protein [Plasmodium vivax Sal-1]
gi|148803461|gb|EDL44860.1| replication factor A-related protein, putative [Plasmodium vivax]
Length = 485
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 210/476 (44%), Gaps = 55/476 (11%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + AA K+++
Sbjct: 13 ITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDVTDVHGDSISCKFWGSAADKWFNN 69
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+L KVY S+G + +AN ++ TV++ YE+ NE+SE+ E ++ Q K + V + +
Sbjct: 70 IELKKVYIFSKGRVSIANPKYNTVKHKYELTFNEDSEIHEVKDDGEIKIQKKISLVNLRD 129
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ +++ K N+ + K++I + D+TK + ++ W+
Sbjct: 130 IKIATKETPFTADLIGIVKHIGTISNLKTKQGND-ITKQNIIIVDDTKHSFEIAFWDSNV 188
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG-RSTVLVSPDLPEAKKLK-----S 412
+ E+ +N I ++ + ++ + T G S++ +L E K K
Sbjct: 189 NLIRDEIKEN----EIYIFTNISIRNWNDMKNGTFGVTSSIEKIENLNEELKAKCTMISE 244
Query: 413 WYESEGK---GTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFSIK 468
WY + GK T+M +I S S + ++ L I+ +L G K +++ K
Sbjct: 245 WYNTNGKYEQFTNMRNILSNDVSQIPDKHYALSDVNDVLAKISGTYTLVGRIKRIYWKSK 304
Query: 469 AYISLIKPDQAMWYRACKTCNKKVTDALGSG--------------------YWCEGCQKN 508
+ + +Y AC C KK+ L SG Y C C +N
Sbjct: 305 ------ENEHRFYYPACTKCKKKL---LSSGQDNATDNDYETNANDEESIVYSCMNCDEN 355
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD-NSYQMKLK 567
+ + Y D SG + F++E ++G A+EL L D +Y K
Sbjct: 356 NVKPFYNYTFNFLFMDFSGSITLRAFSDEGYNLLGKKAEELKGLDEDTLDYLFNYDFLYK 415
Query: 568 EVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVSHQNA 623
E V V V Q+ YN +R T + P + S +LL EI +S N
Sbjct: 416 EYKVV-----VRVNQKVYNGIERVNFTAMRIFPQKHSDIS-YLLNEIQLLISKDNT 465
>gi|237836603|ref|XP_002367599.1| replication factor-A C terminal domain-containing protein
[Toxoplasma gondii ME49]
gi|211965263|gb|EEB00459.1| replication factor-A C terminal domain-containing protein
[Toxoplasma gondii ME49]
Length = 732
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 178/408 (43%), Gaps = 49/408 (12%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L +LNPY W +KVRV + ++ + KNAR F +L D G I+A + +AA +
Sbjct: 238 LKTLNPYVVRWRLKVRVVERTDLMSTKNARQ---FFTADLKDASGEVIRAVFWGDAAEHW 294
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE----TAFIPQTKF 292
+ GKVY +S+G ++VANK+F TV + YE+ +SE+ E +E TA +
Sbjct: 295 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEITEVADEGDISTARKLKALM 354
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I E R + D++ VV P S+ K E +R++ V D ++ + +S
Sbjct: 355 SLRDIAESKREL--PFFADVLVVVVESQPVTSVVSKKTGEEFKRRNVKVVDRSQYEMEIS 412
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP------DLPE 406
LW + L+ +VA L+V ++QG ++ G+ +++ +
Sbjct: 413 LWGNQV-----DALEGVSLPRVVAFTGLQVREWQGGRQASTGKGGEILTSLQSFAGADKD 467
Query: 407 AKKLKSWYESEGKGTSMASIG-SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
++ L WY+ AS+ SG G + GA ++ RV + + D F
Sbjct: 468 SQTLLQWYKENSGSVRFASMSRSGTGEM--GGAGALEKRRVEEKCVDEIKQMTDGA---F 522
Query: 466 SIKAYI----------------------SLIKPDQA-MWYRACKTCNKKVTDALGSGYWC 502
S I S QA + Y AC +C KK+ + Y C
Sbjct: 523 SFIGQIRRVYWRARRRDAGEDRDRQMGTSGADAQQAVIMYPACSSCRKKLVENGEGDYTC 582
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
C K + RY+++ D + I F ++AE ++G A+EL
Sbjct: 583 YACDKPHAQADWRYMLMVNFVDHTSNITIRCFADQAEELLGVPANELQ 630
>gi|70952412|ref|XP_745376.1| replication factor A-related protein [Plasmodium chabaudi chabaudi]
gi|56525679|emb|CAH78783.1| replication factor A-related protein, putative [Plasmodium chabaudi
chabaudi]
Length = 482
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 214/470 (45%), Gaps = 60/470 (12%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y W IK +V +K + T+KN F++++TD G I + +A K+++
Sbjct: 8 ITTYVSKWIIKAKVVNKSKLSTFKN---NNSFFSIDITDVHGDSISCKFWGSSADKWFNN 64
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+L KVY S+G + +AN ++ V++ YE+ NE+SE+ E ++ Q + V + +
Sbjct: 65 IELKKVYIFSKGRVSIANPKYNNVKHKYELTFNEDSEIHEVKDDGEIKIQKNISLVNLRD 124
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ T D+IG+V+++ P +++ K N++V K++I + D+TK + +S W+
Sbjct: 125 IKIATKETPFTADLIGIVKHICPPNNLKTKQGNDIV-KQNIIIVDDTKHSFEISFWDSNV 183
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG-RSTVLVSPDLPEAKK-----LKS 412
+ ++L +N I ++ + ++ + T G S++ +L + K +
Sbjct: 184 NLIEKDLKEN----EIYIFTNISIRNWNDMKNGTFGVTSSIEKVENLNDELKNKCLGISE 239
Query: 413 WYESEGK---GTSMASIGSG--LGSLAKNGARSMYSDRVSLTHITSNPSL-GDEKPVFFS 466
WY + GK T+M +I S + + K+ A S +D L I+ +L G K +++
Sbjct: 240 WYNNNGKYEQFTNMKNILSNDVIQTPDKHYAVSDVND--VLGKISGTYTLVGRIKRIYWK 297
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTDALGSG---------------------YWCEGC 505
K + + +Y AC C KK+ L SG Y C C
Sbjct: 298 SK------ENEHRFYYPACTKCKKKL---LSSGQDNTQGMDYDNSNFNNDESCVYSCMNC 348
Query: 506 QKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD-NSYQM 564
+ND + Y D SG + F++E ++G A+EL L D +Y
Sbjct: 349 DENDVKPFYNYTFNFLFMDFSGSITLRAFSDEGFNLLGKKAEELKGLDEDTLDYLFNYDF 408
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
KE V V V+Q+ YN +R T + P ++ S +LL EI
Sbjct: 409 LYKEYKVV-----VRVSQKIYNGIERVNFTAMRIFPQKYSDIS-YLLNEI 452
>gi|123477451|ref|XP_001321893.1| OB-fold nucleic acid binding domain containing protein [Trichomonas
vaginalis G3]
gi|121904728|gb|EAY09670.1| OB-fold nucleic acid binding domain containing protein [Trichomonas
vaginalis G3]
Length = 568
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 136/590 (23%), Positives = 249/590 (42%), Gaps = 93/590 (15%)
Query: 29 VVQVLDLKLTGNR-------YMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDY 81
+VQVL LK T + Y + +DG A L S+ + + SG ++ +I++ Y
Sbjct: 25 IVQVLSLKKTHQKGDPNAISYKLSINDGTCSYNAFLHSHFNKYIDSGRLKQFTIIKITKY 84
Query: 82 ALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLK 141
++I ++I L EI + S II PKQ I +
Sbjct: 85 T-SKIFGLHHSFII----------LGFEI---LDSQIDHIIGDPKQ----------ISSQ 120
Query: 142 PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRT 201
P+ + +++S + H L L+PY NW+IK RVT K ++T
Sbjct: 121 PENQRLSESQP----------------CVPEVFHLLTDLSPYILNWSIKARVTRKSPIKT 164
Query: 202 YKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFK 261
++ G+ F+V L D GT+I+A ++ +FYD L VY S G + + ++
Sbjct: 165 FRAVNGQRRSFSVVLKDTTGTEIEAVFYDGDLERFYDLLVLENVYCFSNGIVVQNSNKYG 224
Query: 262 TVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSP 321
NDY + +++ E V + I +N++ + ++ V+ ++VD +GVV + P
Sbjct: 225 YTANDYTIKFGSRAKIIE-VPDLGDIGFLSYNYMKLADI--VVHKPKIVDFLGVVTQIYP 281
Query: 322 TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLK 381
I K + KR + + D++ + ++LW++ A N + + ++++K +
Sbjct: 282 VEKIDSKYRTN-ISKRSVELCDQSNLLIDLTLWDDQADNFPE------NGKFVLSLKGAR 334
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
+ ++G+SL+ L + + +P L+ W+E+ AK+ M
Sbjct: 335 ISTYRGVSLTALSTTLIDTNPSGEMPDNLRKWFEN-----------------AKSSVMDM 377
Query: 442 YSDRVSLTHITSNP--SLGDEKPVFFSIKA---YISL------IKPDQAMWYRACKT--C 488
++VS + ++P L + V+ S K Y S I + ++Y AC C
Sbjct: 378 --EKVSRSGTFASPLLDLKEASQVYDSFKGESFYHSFCGMVIDISVIRKLYYCACPNPHC 435
Query: 489 -NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEE--AERIIGCS 545
K + Y CE C + E RY + D +G +S+ + E+IIG
Sbjct: 436 RGKGLYSPEPDLYLCERCHQRVEHPRHRYAFSMVIADHTGSIRVSLLGNDILGEKIIGRK 495
Query: 546 ADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTV 595
D+ + L D + L V + L++ +N E R + +V
Sbjct: 496 IDDWVQETKDLTDIQIRTL-LCPVFFNFFKLKLRTKLDTFNAETRVKTSV 544
>gi|403222035|dbj|BAM40167.1| uncharacterized protein TOT_020000429 [Theileria orientalis strain
Shintoku]
Length = 463
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 215/458 (46%), Gaps = 47/458 (10%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ + Y NWTI +V K +R+ K G+ +F++++ D++G I+A + AA K
Sbjct: 6 PIKDITTYINNWTILGKVVDKSKLRSIK---GDNSLFHIDIVDKNGDTIRAKFWGVAANK 62
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFN 293
+ + Q G VY S+GT+ ++NK+F T+ + YE+ N +S +E + VNE + ++
Sbjct: 63 WNEILQKGSVYTFSKGTVNLSNKKFNTLPHKYEITFNTDSLIEPSDEVNEINV--ERNYD 120
Query: 294 FVPIDELGRYVNGTE-----LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
FV + R + T +VD++ ++++P +S+ N+ +R + V D+T
Sbjct: 121 FVSL----RDIKSTSRDPPFVVDLLCFAKSLTP-ISVTNTKYNKETKRRSLFVVDDTSYE 175
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST--VLVSPDLPE 406
+ V++W ++ + + DN P++ I + + ++ G + G S+ L S +
Sbjct: 176 LEVTVWGDMTES---SIFDNILDKPVI-ISQVTIKEWNGGRIGHTGYSSDIKLASANSVR 231
Query: 407 AKK----LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
K L+SWY+ G S+ G S R + T + K
Sbjct: 232 NKDRLATLESWYQ------QALQQNEGFKSMKAQGG---LSGRETYEFSTIENVVTKGKG 282
Query: 463 VF-FSIKAYISLIKPDQA---MWYRACKTCNKKVTDALGSG-YWCEGCQKNDEECSLRYI 517
F F+ K K +WY+AC C+KK + S Y C C + + RY
Sbjct: 283 YFTFNCKLRKLFWKNKDGSARLWYKACPNCHKKAINEQDSNVYRCISCDDSIVQPEPRYS 342
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS-QLGDDNSYQMKLKEVTWVPHLL 576
+ D SG+ +++ + ++++G S EL+ + S QL + + + K++ V
Sbjct: 343 FSCVLIDFSGQIVTTVYGDMGKKLLGLSERELDGMDSEQLRNTLDFDVLHKDLK-VSGFF 401
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ V YN E R + A+ V++A E++ LLE++
Sbjct: 402 KSRV----YNGESRTVFNITALEEVNYAKEAENLLEKM 435
>gi|297811003|ref|XP_002873385.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319222|gb|EFH49644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 195
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 91/137 (66%), Gaps = 23/137 (16%)
Query: 285 AFIPQTKFNFVPIDELGRYVNGTE-------LVDIIGVVQNVSPTMSIRRKSNNEMVPKR 337
FIP+ KFNFVP D+ G Y+ +E + D+IGVVQ VSP SIRR+++NE++PKR
Sbjct: 6 TFIPEIKFNFVPTDKFG-YIRKSERPLLCYFIPDVIGVVQIVSPNNSIRRRNDNELIPKR 64
Query: 338 DITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRST 397
DITVADETK+TV VSLWN+L T +GQELLD AD KSLK GDFQ LG
Sbjct: 65 DITVADETKKTVVVSLWNDLPTGIGQELLDMAD-------KSLKAGDFQ------LGDRK 111
Query: 398 V--LVSPDLPEAKKLKS 412
V ++S + E KLKS
Sbjct: 112 VEDIISCIVDEPNKLKS 128
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 61/82 (74%)
Query: 535 NEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVT 594
+ + E II C DE N+LKS+ G N +Q K+KEV W PHL R+SV+QQEYN EKRQ T
Sbjct: 109 DRKVEDIISCIVDEPNKLKSEEGGVNEFQTKMKEVIWSPHLFRISVSQQEYNREKRQTTT 168
Query: 595 VRAVAPVDFAAESKFLLEEISK 616
VR V+P+DF AE++ LL++ISK
Sbjct: 169 VRGVSPIDFTAETRLLLQDISK 190
>gi|403331791|gb|EJY64864.1| hypothetical protein OXYTRI_14991 [Oxytricha trifallax]
Length = 593
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 188/402 (46%), Gaps = 48/402 (11%)
Query: 176 PLVSLNPYQG-NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P+ LN G +W IK RVT KG Y G + +EL D++GTQI+ T + ++
Sbjct: 109 PIKDLNTASGEDWFIKGRVTKKGKKIVY----ATGFMLKIELIDKEGTQIEGTFYKDSCD 164
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV-----------NE 283
KF D+ + GK+Y I +G + ANK+F ++QNDY + E+S V+E V ++
Sbjct: 165 KFIDKIEEGKIYVIGKGQIANANKKFTSIQNDYRIIFTEHSHVQEYVSMKDEVESKQSHQ 224
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT---MSIRRKSNNEMVPKRDIT 340
+ + KFNF+ I ++ ++ + +D+IG+ + P + ++ V R I
Sbjct: 225 SEHFQRFKFNFLKISDVLSCIHNLKQIDVIGINISKDPKRDDIEVKFDYGKNNVKGRLIL 284
Query: 341 -VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG-RSTV 398
+ D + ++ V+LW EL+ ++ IV I ++ ++ G S++ +
Sbjct: 285 EIVDNSNESINVTLWGELSN-------LEFNEGDIVIINGGRISNYGGKSINCGSEHCKI 337
Query: 399 LVSPDLPEAKKLKSWY-----------ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVS 447
+++P L+++ + + + A G+ L ++ +++ + +
Sbjct: 338 IINPSREVVSDLENYINVDKINLVAKTKQQIQSQEQAVRAEGMSKL-RDESQTFIVNLLE 396
Query: 448 LTHITSNPSLGDEKPVF------FSIKAYIS-LIKPDQAMWYRACKTCNKKVTDALGSGY 500
+ + + + F F ++ I+ ++P ++ Y C C KKVTD +G+
Sbjct: 397 ELNCSFEGTFNEGCETFLNPQGIFCLQGNITKFVQPSDSIAYLGCPICFKKVTDNRLTGF 456
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
+C C K +E Y + A D +G+ I E+AE+++
Sbjct: 457 YCTNCLKIIKE-KHHYFIHAIFQDFTGKVLIGFSREQAEQLM 497
>gi|84995108|ref|XP_952276.1| replication factor A-related protein [Theileria annulata strain
Ankara]
gi|65302437|emb|CAI74544.1| replication factor A-related protein, putative [Theileria annulata]
Length = 466
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 208/457 (45%), Gaps = 34/457 (7%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M P+ ++ Y NWTI +V K +++ K G+ V++ D++G I+A +
Sbjct: 1 MANSYFPIKNITTYTSNWTILGKVVEKSPLKSLK---GDNAFLFVDIVDKNGDTIRAKFW 57
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
AA K+ D + G VY S+G++ ++NK+F ++YE+ + ++ + +
Sbjct: 58 GLAANKWNDLLEKGNVYTFSKGSVNLSNKKFNNTPHNYEITFGTDGVIDPSDELDDINVE 117
Query: 290 TKFNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ FV + ++ T VDI+ V++++P +S+ N KR + V D+T
Sbjct: 118 RNYEFVTLRDIKSTSRDTPFVVDILCFVKSLTP-VSVTNTKFNRDTKKRLLYVVDDTSYE 176
Query: 349 VTVSLWNELA-TNVGQELLDNADKSPIVAIKSLKVGDFQGISLST---LGRSTVLVSPDL 404
+ V+LW ++ + ++LD V IK G F SL+T L + + D
Sbjct: 177 LEVTLWGQMTELPIFDDILDKPVILSQVTIKEWNGGRFGQTSLTTDIKLADFQSVRNKD- 235
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
L++WY+ K S + + ++M S R S T ++ K F
Sbjct: 236 -RLSTLEAWYQ---KAMSENETFKTMKT------QTMSSSRDSYEFSTIEDAMTRAKGYF 285
Query: 465 -FSIKAYISLIK---PDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
F+ K K D +WY +C C KKV + + + C C + LRYI+
Sbjct: 286 TFNCKLRKLFWKNKDGDMRLWYHSCPNCYKKVVEEQENVWRCITCDDSIVTPVLRYIVTC 345
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNEL-KSQLGDDNSYQMKLKEVTWVPHLLRVS 579
D SG+ +++++ ++++G + EL+ + K QL + + + ++ +VS
Sbjct: 346 VFVDFSGQMVSTVYSDNGKKLLGYTEQELDAMDKEQLKNTLDFDVLHRD-------FKVS 398
Query: 580 --VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ YN E R V V VD+A E++ LLE++
Sbjct: 399 GFFKNKTYNGESRNIFNVTNVEEVDYAKETELLLEKM 435
>gi|449532803|ref|XP_004173368.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 374
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 78/118 (66%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N P A+ R+ P+ +LNPYQG WTIK RVTSKG +R Y N RG+G VF+ +L D
Sbjct: 253 NRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAY 312
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
+I+ T FN A +FY++ + GKVY+IS+G+L+ A K F ++NDYE+ L S ++
Sbjct: 313 RGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQ 370
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 20 DSSSDIPEIVVQVLDLKLTGN-------RYMFNASDGKKRLKAILPSNLSSEVISGNIQN 72
+SS++ + ++QV+DLKL R+ SDG + +L + L+ V SG +Q
Sbjct: 22 ESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQK 81
Query: 73 KGLIRLLDYALNEIPTKSEKYLIVTKCEVV 102
++RL Y N P + +IV + +V+
Sbjct: 82 GSIVRLRQYVCN--PVQERLIIIVIELDVI 109
>gi|116785534|gb|ABK23763.1| unknown [Picea sitchensis]
Length = 67
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 62/67 (92%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M+RRV+PLVSLN YQGNWTIKVRVT+KG +RT++NARGEG VFNVELTDEDGTQIQATMF
Sbjct: 1 MSRRVYPLVSLNRYQGNWTIKVRVTNKGPLRTFRNARGEGSVFNVELTDEDGTQIQATMF 60
Query: 230 NEAARKF 236
EAA KF
Sbjct: 61 KEAADKF 67
>gi|221483976|gb|EEE22280.1| replication factor, putative [Toxoplasma gondii GT1]
Length = 726
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 178/407 (43%), Gaps = 47/407 (11%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L +LNPY W +KVRV + ++ + KNAR F +L D G I+A + +AA +
Sbjct: 232 LKTLNPYVVRWCLKVRVVERTDLMSTKNARQ---FFTADLKDASGEVIRAVFWGDAAEHW 288
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE----TAFIPQTKF 292
+ GKVY +S+G ++VANK+F TV + YE+ +SE+ E +E TA +
Sbjct: 289 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEITEVADEGDISTARKLKALM 348
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I E R + D++ VV P S+ K E +R++ V D ++ + +S
Sbjct: 349 SLRDIAESKRELPF--FADVLVVVVESQPVTSVVSKKTGEEFKRRNVKVVDRSQYEMEIS 406
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDL-----PE 406
LW + L+ +VA L+V ++QG ++ G+ S +L S +
Sbjct: 407 LWGNQV-----DALEGVSLPRVVAFTGLQVREWQGGRQASTGKGSEILTSLQSFAGADKD 461
Query: 407 AKKLKSWYESEGKGTSMASIG-------SGLGSLAK---------------NGARSMYSD 444
++ L WY+ AS+ G G+L K +GA S
Sbjct: 462 SQSLLQWYKENSGSVRFASMSRGGTGEMGGAGALEKRRVEEKCVDEIKQMTDGAFSFIGQ 521
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA-MWYRACKTCNKKVTDALGSGYWCE 503
+ G+++ + S QA + Y AC +C KK+ + Y C
Sbjct: 522 IRRVYWRARRRDTGEDR----DRQMGTSGADAQQAVIMYPACSSCRKKLVENGEGDYTCY 577
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
C K + RY+++ D + I F ++AE ++G A+EL
Sbjct: 578 ACDKPHAQADWRYMLMVNFVDHTSNITIRCFADQAEELLGVPANELQ 624
>gi|221505253|gb|EEE30907.1| replication factor, putative [Toxoplasma gondii VEG]
Length = 726
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 178/407 (43%), Gaps = 47/407 (11%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L +LNPY W +KVRV + ++ + KNAR F +L D G I+A + +AA +
Sbjct: 232 LKTLNPYVVRWCLKVRVVERTDLMSTKNARQ---FFTADLKDASGEVIRAVFWGDAAEHW 288
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE----TAFIPQTKF 292
+ GKVY +S+G ++VANK+F TV + YE+ +SE+ E +E TA +
Sbjct: 289 SPVLKQGKVYQMSKGRVQVANKRFNTVGHQYELVFYRDSEITEVADEGDISTARKLKALM 348
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I E R + D++ VV P S+ K E +R++ V D ++ + +S
Sbjct: 349 SLRDIAESKRELPF--FADVLVVVVESQPVTSVVSKKTGEEFKRRNVKVVDRSQYEMEIS 406
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDL-----PE 406
LW + L+ +VA L+V ++QG ++ G+ S +L S +
Sbjct: 407 LWGNQV-----DALEGVSLPRVVAFTGLQVREWQGGRQASTGKGSEILTSLQSFAGADKD 461
Query: 407 AKKLKSWYESEGKGTSMASIG-------SGLGSLAK---------------NGARSMYSD 444
++ L WY+ AS+ G G+L K +GA S
Sbjct: 462 SQSLLQWYKENSGSVRFASMSRGGTGEMGGAGALEKRRVEEKCVDEIKQMTDGAFSFIGQ 521
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQA-MWYRACKTCNKKVTDALGSGYWCE 503
+ G+++ + S QA + Y AC +C KK+ + Y C
Sbjct: 522 IRRVYWRARRRDAGEDR----DRQMGTSGADAQQAVIMYPACSSCRKKLVENGEGDYTCY 577
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
C K + RY+++ D + I F ++AE ++G A+EL
Sbjct: 578 ACDKPHAQADWRYMLMVNFVDHTSNITIRCFADQAEELLGVPANELQ 624
>gi|399217121|emb|CCF73808.1| unnamed protein product [Babesia microti strain RI]
Length = 455
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 193/456 (42%), Gaps = 44/456 (9%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
+ Y NW I RV K + T KN +F +++ D+ G I+A + AA K +
Sbjct: 10 ITTYTTNWIIIARVVEKSPLNTLKNNNK---LFYIDIVDKLGDTIRAKFWGNAADKHFPL 66
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+LGKVY S+G + V+N++F T N YE+ NS + ++ + +FNF+ I +
Sbjct: 67 LELGKVYSFSQGRVSVSNRKFNTNPNMYELTFEANSPISPIEDDGLINTKRRFNFISIRD 126
Query: 300 LGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
+ V DI+ +V V+ + KS +E KR I V D++ + VS W++ A
Sbjct: 127 IKNTSKELPFVCDILCIVNTVAQPQILNMKSGDE-TQKRSIFVVDDSNYQMEVSFWSDKA 185
Query: 359 T-NVGQELLDNADKSPIVAIKSLKVGDFQGI--SLSTLGRSTVLVSP---DLPEAKKLKS 412
++ + + + V + +K+ D+Q + S G S D + L+
Sbjct: 186 NLDIFNDCIGKS-----VVLSQIKIKDWQNVRSGYSWSGSSITYACDENVDKSQLHSLEK 240
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYS-DRVSLTHITSNPSLGDEKPVFFSIK-AY 470
WY S S+ NG +YS +R L+ I+ N +G +K Y
Sbjct: 241 WYH------EAISKNHDFISMKSNGQSHVYSIERKDLSSISMNNEVGGSYEFVAHLKRIY 294
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
+ + Y +C C KKV + C C + E RY A D SG
Sbjct: 295 WKNRDGEITLIYPSCNKCKKKVHMDENEKFVCPSCD-SIVEPEFRYRFTAIFADYSGHLP 353
Query: 531 ISIFNEEAERIIGCSADEL-----NELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ-- 583
I F + + +I AD+L + LK L D YQ L RVSV +
Sbjct: 354 IHFF-DIGQSLINVQADKLKSLDHDSLKQFLDHDILYQ-----------LFRVSVYAKVS 401
Query: 584 EYNNEKRQRVTVRAVAPVDFAAESKFLLEEISKKVS 619
+N E + V PV++ E ++ + + K V+
Sbjct: 402 TFNGEVKTVYRATKVEPVNYEEEIAYMTDVLKKSVN 437
>gi|147769421|emb|CAN65830.1| hypothetical protein VITISV_038135 [Vitis vinifera]
Length = 904
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 66/71 (92%)
Query: 314 GVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP 373
GVVQ+VSPTMSIRRKSN ++VPKRDIT+AD+TK++V VSLWN+ TNVGQELLDNADK P
Sbjct: 766 GVVQSVSPTMSIRRKSNKDIVPKRDITIADKTKKSVVVSLWNDHGTNVGQELLDNADKFP 825
Query: 374 IVAIKSLKVGD 384
IVAIKSLKVG+
Sbjct: 826 IVAIKSLKVGE 836
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
+ YIMV +V D SGEAW+S+FNE+AERI G SADEL++LKSQL D ++
Sbjct: 851 VEYIMVVKVSDASGEAWLSLFNEQAERIFGYSADELDKLKSQLNPDYCWR 900
>gi|402594450|gb|EJW88376.1| BRCA2 repeat family protein [Wuchereria bancrofti]
Length = 539
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 186/415 (44%), Gaps = 71/415 (17%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V P+ L PY NW + ++V S +R + R +F + D+ G +I+ + F + A
Sbjct: 146 VTPIKLLTPYCKNWRLCIKVISVDEIRCIRGQR----IFAFQAVDDGGVEIRVSAFGDIA 201
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+ ++YYI+ ++++ANK++ Q+D E+ L +SEV + + PQ
Sbjct: 202 HRTSTLICPEQMYYITHASVKMANKRYSRNQHDMEVVLRPDSEVTKCTDR----PQI--- 254
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
+SP ++ KR+I + D++ VTV+L
Sbjct: 255 -------------------------LSP---------KKICKKREIQIVDDSGYYVTVNL 280
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLKS 412
W + A ++ + ++A+K L V FQG +SL ++ + +L P PEA L+S
Sbjct: 281 WGQKA-----KVFPSEQYQHVLAVKGLLVRCFQGTLSLVSMASTKLLHDPHFPEADALRS 335
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
WY ++ + + S N R + ++S+ FF++ A IS
Sbjct: 336 WYSKNKDKAFKSATVNQVSSF--NEHRWIKQLKLSV------------DGHFFNLTAMIS 381
Query: 473 LIKPDQAMWYRACKTCNKK-VTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
I + A+ Y+ C TC KK + + G Y C C +E Y + + D +G +
Sbjct: 382 SIFIENAV-YKGCLTCKKKLLVEKDGDLYICSKCGICNEY-KYYYTLHMELFDFTGTVHV 439
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYN 586
+ F++ +++IG ADE+ + D + YQ K V + P++ R+ AQ+ N
Sbjct: 440 TAFDDCGQKLIGEQADEVAKFLR--FDRDRYQSSFKSVLFKPYMFRLG-AQRSGN 491
>gi|429327570|gb|AFZ79330.1| hypothetical protein BEWA_021780 [Babesia equi]
Length = 467
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 206/453 (45%), Gaps = 37/453 (8%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ ++ Y NWTI R+ K +++ K + ++++ D++G I+ + AA K
Sbjct: 7 PIKNITTYTSNWTILARIIDKSPLKSIK---SDNSFMSIDIKDKNGDTIRGKFWGVAATK 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
+ D Q G VY S+G++ +ANK+F ++YE+ N +S++E+A + + +NFV
Sbjct: 64 WDDILQKGNVYTFSKGSVNLANKKFNNTPHNYELTFNIDSQIEQADDIGDIDNERNYNFV 123
Query: 296 PIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ E+ + +VDI+ +++SP K + EM +R + + D++ + ++LW
Sbjct: 124 TLREIKSTARESPFMVDILCFAKSISPISMTSTKFSKEM-KRRTLHIVDDSGYELEITLW 182
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQG--ISLSTLGRSTVLVSP----DLPEAK 408
++A ELLD+ P++ + + + ++ G S+L + + D +
Sbjct: 183 GQMAE---LELLDDILDKPLI-VSQITIKEWNGGRYGQSSLASDIKIANQQNVRDKDKLS 238
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
L++WY + S I L S + + Y + ++ I S G F+ K
Sbjct: 239 NLETWYH---QALSQNEIFKSLKSQSSISNKETY-EFSNIEKINSKTKGG----YTFNCK 290
Query: 469 AYISLIKPDQA---MWYRACKTCNKKV-TDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
K +WY++C C KKV D + Y C C LR++ D
Sbjct: 291 LRRIFWKNKDGTTRLWYQSCPMCFKKVIIDEDSNIYRCIACDDAVVTPVLRFLFTCLFID 350
Query: 525 GSGEAWISIFNEEAERIIGCSADELNEL-KSQLGDDNSYQMKLKEVTWVPHLLRVS--VA 581
SG+ +I+ E ++IG + +L+ L K +L + + K+ ++S
Sbjct: 351 YSGQIICNIYGENGTKLIGMTEQQLDALDKDKLKNALDFVATHKD-------FKISGFYK 403
Query: 582 QQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ YN E + V + V+ E+ LL+++
Sbjct: 404 SKTYNGEVKNTFNVTNIELVNHIDEANMLLDKM 436
>gi|395840382|ref|XP_003793039.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Otolemur garnettii]
Length = 475
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 147 VAKS--AAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKN 204
V+KS A++ G P +V P+ SL PYQ WTI RVT+K +RT+ N
Sbjct: 155 VSKSFGASKTFGKPGGMSLPNTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSN 214
Query: 205 ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ 264
+RGEG +F+VEL D+ G +I+AT FN+ KF+ ++ KVYY ++GTL++ANKQF V+
Sbjct: 215 SRGEGKLFSVELVDQSG-EIRATAFNDQVDKFFPLIEVNKVYYFTKGTLKIANKQFSAVK 273
Query: 265 NDYEMNLNENS 275
NDYEM + ++
Sbjct: 274 NDYEMTFSNDT 284
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEE 511
+ N GD+ F S+ + L K + + CNKKV D Y CE C
Sbjct: 309 SENLGQGDKADYFSSVATVVYLRKENSMYQAYPTQDCNKKVIDQQNGLYRCEKCDSEFPN 368
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTW 571
R I+ + D W++ F E AE I+G + L ELK + ++ +++ + +
Sbjct: 369 FKYRMILSVNIADFQDNQWVTCFQESAEAILGQNTAYLGELKEK--NEQAFEEVFQNANF 426
Query: 572 VPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
R+ V + YN+E R + TV V PVD+ + L+ I +
Sbjct: 427 RSFTFRIRVKLENYNDESRIKATVMDVKPVDYREYGRRLITNIRR 471
>gi|312072189|ref|XP_003138952.1| BRCA2 repeat family protein [Loa loa]
Length = 502
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 156/335 (46%), Gaps = 51/335 (15%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V P+ L PY NW + ++VTS +R RG+ +F+ D+ G +I+ + F + A
Sbjct: 176 VTPIKLLTPYCKNWRLCIKVTSVDEIRC---IRGQH-IFSFLAVDDGGVEIRVSAFGDIA 231
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI-PQTKF 292
+ ++YYI+R ++++AN+++ ++D E+ L +SEV + + + P+ F
Sbjct: 232 CRTATLICPEQMYYITRASVKMANRRYSRNEHDMEVVLRPDSEVTKCTDRPYILSPKVNF 291
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
FV I L +++ TE+ E + KR+I V D++ V ++
Sbjct: 292 EFVRIHNLQNFID-TEI----------------------EELQKREIQVVDDSGYYVAIN 328
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLK 411
LW + A ++ N ++A+K L V FQG ISL +L S +L P PEA L+
Sbjct: 329 LWGQKA-----KMFPNEQYQHVLAVKRLLVRCFQGTISLVSLASSKLLHDPHFPEADALR 383
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
WY K AS+ S + + + + PSL FF++ A I
Sbjct: 384 FWYSENRKSFKPASMNQV----------SSFHEHKWIKQL--KPSLDGH---FFNLTAMI 428
Query: 472 SLIKPDQAMWYRACKTCNKK-VTDALGSGYWCEGC 505
S I + A+ Y+ C TC KK + + Y C C
Sbjct: 429 SSIFTENAV-YKGCPTCKKKLLVEKDNDLYICSKC 462
>gi|170591825|ref|XP_001900670.1| BRCA2 repeat family protein [Brugia malayi]
gi|158591822|gb|EDP30425.1| BRCA2 repeat family protein [Brugia malayi]
Length = 387
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 53/369 (14%)
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI-PQTKFNFVPIDELGRY 303
+YYI+ ++++ANK++ Q+D E+ L +SEV + + + P+ F FV I L +
Sbjct: 1 MYYITHASVKMANKRYSRNQHDMEVVLRPDSEVTKCTDRPQILSPKVNFEFVRIHNLQSF 60
Query: 304 V---------------------NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ N TE D++G V ++ ++ K+ ++ KR+I +
Sbjct: 61 IDTEIESFGACEGFLMNKERLNNITE--DVLGTVIHIGEMKQLKSKTGEDL-QKREIQIV 117
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVS 401
D++ VTV+LW + A ++ + ++A+K L V FQG ISL ++ + +L
Sbjct: 118 DDSGYYVTVNLWGQKA-----KIFPSEQYQHVLAVKGLLVRCFQGTISLVSMTSTKLLHD 172
Query: 402 PDLPEAKKLKSWY-ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
P PEA L+ WY +++ K AS+ + S ++ R + + S+
Sbjct: 173 PHFPEADALQFWYSKNKDKAFKSASVNQ-VSSFKEH--RWIKQLKFSV------------ 217
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKK-VTDALGSGYWCEGCQKNDEECSLRYIMV 519
FF++ A IS I + A+ Y+ C TC KK + + G Y C C +E Y +
Sbjct: 218 DGHFFNLTAMISSIFIENAV-YKGCLTCKKKLLVEKDGDLYICSKCGICNEY-KYYYTLH 275
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
+ D +G ++ F++ A+++IG ADE+ +L + D + YQ K V + P++ R+
Sbjct: 276 MELFDFTGTVHVTAFDDCAQKLIGEQADEVAKL--LIFDRDRYQSSFKSVLFKPYMFRLG 333
Query: 580 VAQQEYNNE 588
AQ+ N +
Sbjct: 334 -AQRRGNTD 341
>gi|66804925|ref|XP_636195.1| hypothetical protein DDB_G0289513 [Dictyostelium discoideum AX4]
gi|60464550|gb|EAL62688.1| hypothetical protein DDB_G0289513 [Dictyostelium discoideum AX4]
Length = 679
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 193/400 (48%), Gaps = 53/400 (13%)
Query: 187 WTIKVRVTSKGNMRTY-KNARGEGCVFNVELTDEDGTQIQATMFNEAAR------KFYDR 239
+TI+ V +K ++++ K A GEG +F++EL D G +I+ F++++ YD
Sbjct: 225 FTIRAMVRNKQPLKSWNKGANGEGKLFSMELVDSTG-EIKCACFSDSSNPNNFINALYDC 283
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
F+ GKVY+I R ++ ANK + T+ + E+++N S V + ++T F P +NF I +
Sbjct: 284 FENGKVYFIQRFFVKSANKLYNTLSHQSELSINSESRVMISPDQTQFTPH--YNFKKIAD 341
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
+ + + VD+IG + N+ P ++ K E K IT+AD+T ++ V WNE AT
Sbjct: 342 I-ENLEKNDTVDVIGAITNIDPIANLTSKQGKEFT-KFGITIADDTNASINVVFWNEKAT 399
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISLS-TLGRSTVLVSPDLPEAKKLKSWYESEG 418
V ++ I+A+K +KV DF G +LS + G S L L E L++ ++
Sbjct: 400 EVAPQV----KVGDIIAMKGVKVSDFSGRTLSYSFGSSFGLNDEQLQETSNLRAHLQN-F 454
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFS-----------I 467
S+ S+ ++A + +S Y ++V+L I ++ + P+F S I
Sbjct: 455 DVNSLQSL-----TIASSYTQSSY-EQVNLP-IFLIRTISEGSPLFISDPKTNKKLYRTI 507
Query: 468 KAYISLIKPDQA------------MWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
+ ++ QA M ++ K + GS C C +D E + R
Sbjct: 508 GQFQRVVPLSQAGEMDKGDEISSKMEWKYKACKKCKKSCPEGS---CPQCGSDDWEYAYR 564
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
M ++ DG + + + +R+ G SA EL ++ +
Sbjct: 565 --MSLKLSDGDDAISVEVMGKTGDRLFGKSAAELYQMNQE 602
>gi|237831865|ref|XP_002365230.1| hypothetical protein TGME49_060570 [Toxoplasma gondii ME49]
gi|211962894|gb|EEA98089.1| hypothetical protein TGME49_060570 [Toxoplasma gondii ME49]
Length = 410
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+A+ F A ++ R ++G+VY SRGT+ ANK++ ++ ++YE+ ++ + + E ++
Sbjct: 53 EIRASFFGRVAATWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVIVE-MD 111
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ IP F+ + + L +VD+IG V + T S+ ++ + V ++++++
Sbjct: 112 DDPSIPAQIFSPLKLATLTDDSLVGSVVDVIGFVTSFCETHSVLARNTKDEVRRKELSIV 171
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVS 401
D++ VTV+LW + AT + +L + P++AIK+++V ++ G +SL++ RS +LV
Sbjct: 172 DDSGAAVTVTLWEQHATALKDSVL---AERPLLAIKAVRVSEYAGKVSLTSTSRSVILVD 228
Query: 402 PD-LPEAKKLKSWYESEGK 419
P L EA L +W+E+EG+
Sbjct: 229 PHGLEEADLLAAWWEAEGE 247
>gi|221506608|gb|EEE32225.1| replication factor, putative [Toxoplasma gondii VEG]
Length = 410
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+A+ F A ++ R ++G+VY SRGT+ ANK++ ++ ++YE+ ++ + + E ++
Sbjct: 53 EIRASFFGRVAATWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVIVE-MD 111
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ IP F+ + + L +VD+IG V + T S+ ++ + V ++++++
Sbjct: 112 DDPSIPAQIFSPLKLATLTDDSLVGSVVDVIGFVTSFCETHSVLARNTKDEVRRKELSIV 171
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVS 401
D++ VTV+LW + AT + +L + P++AIK+++V ++ G +SL++ RS +LV
Sbjct: 172 DDSGAAVTVTLWEQHATALKDSVL---AERPLLAIKAVRVSEYAGKVSLTSTSRSVILVD 228
Query: 402 PD-LPEAKKLKSWYESEGK 419
P L EA L +W+E+EG+
Sbjct: 229 PHGLEEADLLAAWWEAEGE 247
>gi|221486920|gb|EEE25166.1| replication factor, putative [Toxoplasma gondii GT1]
Length = 410
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
Query: 223 QIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN 282
+I+A+ F A ++ R ++G+VY SRGT+ ANK++ ++ ++YE+ ++ + + E +
Sbjct: 53 EIRASFFGRVAATWHPRLEVGRVYQFSRGTIDTANKKYNSLSHEYEIKFDDRAVIVETDD 112
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ + IP F+ + + L +VD+IG V + T S+ ++ + V ++++++
Sbjct: 113 DPS-IPAQIFSPLKLATLTDDSLVGSVVDVIGFVTSFCETHSVLARNTKDEVRRKELSIV 171
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVS 401
D++ VTV+LW + AT + +L + P++AIK+++V ++ G +SL++ RS +LV
Sbjct: 172 DDSGAAVTVTLWEQHATALKDSVL---AERPLLAIKAVRVSEYAGKVSLTSTSRSVILVD 228
Query: 402 PD-LPEAKKLKSWYESEGK 419
P L EA L +W+E+EG+
Sbjct: 229 PHGLEEADLLAAWWEAEGE 247
>gi|359493963|ref|XP_003634702.1| PREDICTED: replication factor A protein 1-like [Vitis vinifera]
gi|302143225|emb|CBI20520.3| unnamed protein product [Vitis vinifera]
Length = 75
Score = 111 bits (278), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/67 (71%), Positives = 59/67 (88%)
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
YWCEGCQKND+ECSLRYIMV +V D SGEAW+S+FNE+AERI G SADEL++LKSQ G++
Sbjct: 9 YWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERIFGYSADELDKLKSQEGEE 68
Query: 560 NSYQMKL 566
N +Q K+
Sbjct: 69 NLFQQKM 75
>gi|340378810|ref|XP_003387920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Amphimedon queenslandica]
Length = 251
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 44/254 (17%)
Query: 56 ILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK 115
+L + L+ ++ S I ++R+ +N I K K +I K V+ A
Sbjct: 1 MLATQLNEKITSNEISKYCIVRVDKMLINSIGAK--KVMIFIKLTVLYSA---------- 48
Query: 116 SDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKS---------------AAQILR---- 156
D G++ P+Q + D + K E +A+ A Q ++
Sbjct: 49 QDVGGMLGTPRQLNSDSTDSNSVTPTVKDEPLARPPLAQRSQVGVAPAPVAPQPIQTPPR 108
Query: 157 ------DQNGNMAPAARLAM-----TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNA 205
+ G M A+ L T+ V P+ +LNPYQ WTIK RVTSK +R Y N+
Sbjct: 109 FYGNSAQRTGGMGGASNLMQSPGGGTKNVVPITALNPYQNKWTIKARVTSKPPLRHYNNS 168
Query: 206 RGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQN 265
RGEG + +E D G +I+AT FNE A +F+ ++ KVYY+SRG ++ ANK + N
Sbjct: 169 RGEGRILTLEFVDHSG-EIRATAFNEDADRFFPNVEVNKVYYVSRGRIKPANKIYY-ANN 226
Query: 266 DYEMNLNENSEVEE 279
DYE+ L + +EE
Sbjct: 227 DYELTLGAETTIEE 240
>gi|197305908|gb|ACH59305.1| replication protein [Pseudotsuga menziesii]
gi|197305910|gb|ACH59306.1| replication protein [Pseudotsuga menziesii]
gi|197305912|gb|ACH59307.1| replication protein [Pseudotsuga menziesii]
gi|197305914|gb|ACH59308.1| replication protein [Pseudotsuga menziesii]
gi|197305916|gb|ACH59309.1| replication protein [Pseudotsuga menziesii]
gi|197305918|gb|ACH59310.1| replication protein [Pseudotsuga menziesii]
gi|197305920|gb|ACH59311.1| replication protein [Pseudotsuga menziesii]
gi|197305922|gb|ACH59312.1| replication protein [Pseudotsuga menziesii]
gi|197305924|gb|ACH59313.1| replication protein [Pseudotsuga menziesii]
gi|197305926|gb|ACH59314.1| replication protein [Pseudotsuga menziesii]
gi|197305928|gb|ACH59315.1| replication protein [Pseudotsuga menziesii]
gi|197305932|gb|ACH59317.1| replication protein [Pseudotsuga menziesii]
gi|197305934|gb|ACH59318.1| replication protein [Pseudotsuga menziesii]
gi|197305936|gb|ACH59319.1| replication protein [Pseudotsuga menziesii]
gi|197305938|gb|ACH59320.1| replication protein [Pseudotsuga menziesii]
gi|197305940|gb|ACH59321.1| replication protein [Pseudotsuga menziesii]
gi|197305942|gb|ACH59322.1| replication protein [Pseudotsuga menziesii]
gi|197305944|gb|ACH59323.1| replication protein [Pseudotsuga menziesii]
gi|197305946|gb|ACH59324.1| replication protein [Pseudotsuga menziesii]
gi|197305948|gb|ACH59325.1| replication protein [Pseudotsuga menziesii]
gi|197305950|gb|ACH59326.1| replication protein [Pseudotsuga menziesii]
gi|197305952|gb|ACH59327.1| replication protein [Pseudotsuga macrocarpa]
Length = 67
Score = 110 bits (275), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/60 (68%), Positives = 53/60 (88%)
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSL 514
PS+G+ KP +F+++ YIS IKPDQ MWYRACKTCN+KVT+ +GSGYWCEGCQK++ EC+L
Sbjct: 8 PSVGEGKPAYFNVRVYISFIKPDQPMWYRACKTCNRKVTEEIGSGYWCEGCQKHETECNL 67
>gi|340378814|ref|XP_003387922.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Amphimedon queenslandica]
Length = 240
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 158 QNGNMAPAARLAM-----TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVF 212
+ G M A+ L T+ V P+ +LNPYQ WTIK RVTSK +R Y N+RGEG +
Sbjct: 116 RTGGMGGASNLMQSPGGGTKNVVPITALNPYQNKWTIKARVTSKPPLRHYNNSRGEGRIL 175
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
+E D G +I+AT FNE A +F+ ++ KVYY+SRG ++ ANK + NDYE+ L
Sbjct: 176 TLEFVDHSG-EIRATAFNEDADRFFPNVEVNKVYYVSRGRIKPANKIYY-ANNDYELTLG 233
Query: 273 ENSEVEE 279
+ +EE
Sbjct: 234 AETTIEE 240
>gi|116309010|emb|CAH66127.1| OSIGBa0135L04.1 [Oryza sativa Indica Group]
Length = 502
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 23/360 (6%)
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ + G G +F+ +L D+ G I A ++ A + KVYYI T+R AN+
Sbjct: 28 FCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTVRYANRT 87
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL-VDIIGVVQN 318
++ V N + ++ + EE + A P F+ P ++ V+ T VD++GV+
Sbjct: 88 YRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPHLVDKTIFYVDVMGVITE 147
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP---IV 375
V +R KS N KR I + D + T+ ++LW E A + NA ++ IV
Sbjct: 148 VGSPTVVRPKSRNADSLKRTIQICDASNSTMPITLWGERADAFDANSVYNAGQTQAQVIV 207
Query: 376 AIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL 433
+ +L V D+ G+ L+ G S ++ D+PE +LK + + + S
Sbjct: 208 FVGTL-VKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRPVSW---------- 256
Query: 434 AKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRACKTCNKK 491
N A D I +L K F + + I + + WY +C+ C +
Sbjct: 257 VDNPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVTVRRICSENSWWYNSCRLC-YR 315
Query: 492 VTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNE 551
+ GS Y C C N RY +V D S A +F A R+I S + L E
Sbjct: 316 TSKPYGSSYKCSSC-SNIGIPDPRYKVVLITGDASSNATFILFGRVAHRLIKKSVESLIE 374
>gi|302822669|ref|XP_002992991.1| hypothetical protein SELMODRAFT_431158 [Selaginella moellendorffii]
gi|300139191|gb|EFJ05937.1| hypothetical protein SELMODRAFT_431158 [Selaginella moellendorffii]
Length = 390
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 159/352 (45%), Gaps = 21/352 (5%)
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS-RGTLRVANKQFKTVQNDYEMNL 271
+ ++ D GT+I+ ++ A D+ G VY S G +R +N+ + + +E+
Sbjct: 2 SFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRRSNQAYTPFEVTWEIQA 61
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
N+ E A++E A P+ I + + VD++G+V + T+++ + +
Sbjct: 62 NKGMEFT-ALDEDATFPRIVLAKTSILSACQKERDS-FVDVVGIVIWIG-TITVTSRDSG 118
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGIS 389
V KR + + D++ +V + LW+ A G + + D PI+ +K KV D+ G S
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
LS +G ST+L+ P++ L+ W T+ L+ + +R S +L+
Sbjct: 179 LSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFI-------HLSTSSSRQTVSCTTTLS 231
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCE 503
I++ E + + A + +K D+ +Y AC + C KK T G++C
Sbjct: 232 EISNMQLKVLESSPIYRVIATVKEMKTDE-FYYNACINVLNARQCGKKTTRT-ADGWFCS 289
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
C +Y + + D S W F E A+ I+G SA EL ++ +
Sbjct: 290 YCNIESANMEFKYALKMCIEDSSSHVWAIAFQEAAQEIVGMSAKELATMRDE 341
>gi|197305930|gb|ACH59316.1| replication protein [Pseudotsuga menziesii]
Length = 67
Score = 108 bits (271), Expect = 7e-21, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 53/60 (88%)
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSL 514
PS+G+ KP +F+++ YIS IKPDQ MWYRACKTCN+KVT+ +GSGYWCEGCQK++ EC++
Sbjct: 8 PSVGEGKPAYFNVRVYISFIKPDQPMWYRACKTCNRKVTEEIGSGYWCEGCQKHETECNV 67
>gi|413953822|gb|AFW86471.1| hypothetical protein ZEAMMB73_862151 [Zea mays]
Length = 662
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 151/339 (44%), Gaps = 29/339 (8%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G A ++ A F + G VY +S ++ AN+ +K V ND + + +
Sbjct: 182 LIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKANRMYKPVDNDIMIGFTKWT 241
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VEE + P+ ++ P D+L V+ E +D+IG V +S +IR K
Sbjct: 242 IVEELIEVPPAFPELVYSLTPFDQLTTLVDIREYFIDVIGAVTMISDVATIRTKMRQTQT 301
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR +T+ +E+ + V LW E AT+ AD+ I SL++ F G +
Sbjct: 302 AKRSVTIQNESCTPLEVVLWGEQATSF------PADQISIAGQDSLQIIIFVGTLARSYA 355
Query: 395 RSTVL---------VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
+T L V+P +PEA L + + + + MA+ GS ++ R ++
Sbjct: 356 GTTSLTGGSSCKWYVNPQVPEATSLAASLQHK-RSPIMAAAGS-----TQHVPRISTAEH 409
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC--E 503
++ I EK + ++++K DQ WY +C+ C KK T G Y C
Sbjct: 410 KKVSEIKHLHPFKHEKVEWL---ITVTVLKIDQLWWYESCRKCLKK-TKPHGDAYKCSDS 465
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
GC + RY ++ D +GE +F A+RI+
Sbjct: 466 GCGHVGPP-NPRYRLLITAGDETGETDFILFGRMAQRIV 503
>gi|115470979|ref|NP_001059088.1| Os07g0190600 [Oryza sativa Japonica Group]
gi|34394551|dbj|BAC83855.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|113610624|dbj|BAF21002.1| Os07g0190600 [Oryza sativa Japonica Group]
Length = 544
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 184/419 (43%), Gaps = 39/419 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L +N + NW IKVRV ++ + + R + + L DE+G I A + +KF
Sbjct: 6 LSQINSTRHNWRIKVRVARSWHL-SGTSKRRDFTALELILVDEEGVGITACVGENEIQKF 64
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE-TAFIPQTKFNFV 295
G Y++ + K+ V + Y + + VEE E + +P FNFV
Sbjct: 65 STSIVEGHAYFLRNFRVSRQTKKLNAVPSTYAIFFTPWTIVEEIPTEISGSLPLYIFNFV 124
Query: 296 P---IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP--KRDITVADETKRTVT 350
+DE R+ NG LVD+IG + V P + +SN P +R++ + D + R +
Sbjct: 125 DFEDLDERARHPNG--LVDVIGQLTVVHPLV----QSNGLNGPSVRRNVELRDLSDRLLE 178
Query: 351 VSLWNELATNVGQELLDNA---DKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPE 406
++LW E AT+ E L D+ I+ L + F G S + + ++ D+PE
Sbjct: 179 ITLWAEHATSFEDEFLIETIGKDEPVIIVFAGLNMKLFSGAPSCRSSAATKWYINIDIPE 238
Query: 407 AKKLKSWYESEGKGTSMA-SIGSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEKPVF 464
++ + G + S G+ LG+ A ++R S++ + S NP D V
Sbjct: 239 INAFRTSLQGRGCEVLLVPSDGAALGA-----ANEADANRKSISELLSLNPH--DNNDVR 291
Query: 465 FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCD 524
F+ A I I WY+AC C K V L G+ C C + + Y + + D
Sbjct: 292 FTCDARIKEIDVSSGWWYKACSICRKGVKPTL-QGFECVNCDNTEPIITPSYKLNVVIED 350
Query: 525 GSGEAWISIFNEEAERIIGCSADELNE------------LKSQLGDDNSYQMKLKEVTW 571
+ A I +F AE+++ +A +L E L++ +G +Q+ + E T+
Sbjct: 351 NTDRAKIFMFGGMAEQVVRRTAADLVEESSANQLLLPSPLRALIGRRFVFQIVISEQTF 409
>gi|240848761|ref|NP_001155514.1| replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
gi|239792426|dbj|BAH72558.1| ACYPI003269 [Acyrthosiphon pisum]
Length = 325
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 133/252 (52%), Gaps = 24/252 (9%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
NW+I RV K N+ Y+ RG G F L D+ T+I+A F + + + + Q V
Sbjct: 16 NWSITARVLKKSNVLPYQKERGTGKYFTAILIDK-TTEIRAKAFGDDCDRLFSQLQENNV 74
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE--AVNETAFIPQTKF--NFVPIDELG 301
Y I G +++A+K++ +NDYE+ NE + + + V + PQ K N +D+
Sbjct: 75 YNIKNGQIQLADKKYNKSKNDYEIIFNETTIIIQKFGVTDIPSHPQLKTIENVFSMDQ-- 132
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
L+D IGV+ + + I++ ++N+ R+I +AD T R+VTV+LW+ ATN
Sbjct: 133 -----NTLIDTIGVIIEIEQSKEIKKNNSNDTYKLRNIILADCT-RSVTVTLWDIDATNF 186
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWY-ESEGK 419
NA++ I++I K+ +++ ++ +S G S ++++P E L+ WY E E K
Sbjct: 187 ------NANEGDIMSIMGGKIINYKNVNKISVTGSSEIIINPYWNETFDLQIWYKEFEKK 240
Query: 420 ---GTSMASIGS 428
S SIGS
Sbjct: 241 KLLNLSQVSIGS 252
>gi|321465251|gb|EFX76253.1| hypothetical protein DAPPUDRAFT_249126 [Daphnia pulex]
Length = 182
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 9/163 (5%)
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F DR +GKVYYIS+ L+ ANKQ+ ++NDYEM N+N+ V +E IP FNF+
Sbjct: 24 FCDR-HIGKVYYISQAKLKAANKQYSKIKNDYEMTFNKNTTVYTC-DEATKIPPITFNFL 81
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PI +L ++ ++D+IGVV++ I K+ + R++ + D T V ++LW
Sbjct: 82 PIAQLPN-MDKDSVIDVIGVVKSAKDVRCITSKTTKTELKLREVQMVDSTNAEVNLTLWG 140
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTV 398
+LA +E +A P+VA+K K+ DF G SL T+ + V
Sbjct: 141 KLA----EEF--DATSKPVVALKGAKLSDFGGRSLGTVSSTVV 177
>gi|449282115|gb|EMC89022.1| Replication protein A 70 kDa DNA-binding subunit [Columba livia]
Length = 196
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 7/162 (4%)
Query: 184 QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLG 243
+ W I VT KG + T+ N+RGEG +F+ EL +E ++I+AT F++ A KF+ +L
Sbjct: 27 KSKWAICACVTQKGQICTWSNSRGEGKLFSKELVNE-SSEIRATAFSDHADKFFPLTELD 85
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
KVYY S+GTL+ ANKQ+ V+NDYE + V N+ +P +F+FV I + +
Sbjct: 86 KVYYFSKGTLKSANKQYTAVKNDYETTFTSETSV-VPCNDAQHLPSVQFDFVSISD---F 141
Query: 304 VNGTE--LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
N E +V++ GV ++ + I K NN V KR++ + D
Sbjct: 142 ENTPEDSIVNVSGVCKSYEDVIKIIMKVNNRDVSKRNVHLMD 183
>gi|302795292|ref|XP_002979409.1| hypothetical protein SELMODRAFT_419097 [Selaginella moellendorffii]
gi|300152657|gb|EFJ19298.1| hypothetical protein SELMODRAFT_419097 [Selaginella moellendorffii]
Length = 389
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 163/353 (46%), Gaps = 24/353 (6%)
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS-RGTLRVANKQFKTVQNDYEMNL 271
+ ++ D GT+I+ ++ A D+ G VY S G +R +N+ + + +E+
Sbjct: 2 SFDVVDVQGTEIRIIGSDDCALVLSDKIVQGIVYSFSGSGGIRRSNQAYTPFEVTWEIQA 61
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
N+ E A++E A P+ I + + VD++G+V + T+++ + +
Sbjct: 62 NKGMEFT-ALDEDATFPRIVLAKTSILSACQKERDS-FVDVVGIVIWIG-TITVTSRDSG 118
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGIS 389
V KR + + D++ +V + LW+ A G + + D PI+ +K KV D+ G S
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
LS +G ST+L+ P++ L+ W T+ L+ + +R S +L+
Sbjct: 179 LSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFI-------HLSTSSSRQTVSCTTTLS 231
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCE 503
I++ E + + A + +K D+ +Y AC + C KK T G++C
Sbjct: 232 EISNMQLKVLESSPIYRVIATVKEMKTDE-FYYNACINVVNARQCGKKTTRT-ADGWFCS 289
Query: 504 GCQKNDEECSLRYIMVARVC-DGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
C N E ++ + ++C + S W F E A+ I+G SA EL ++ +
Sbjct: 290 YC--NIESANMEFKYALKMCIEDSSHVWAIAFQEAAQEIVGMSAKELATMRDE 340
>gi|413953613|gb|AFW86262.1| hypothetical protein ZEAMMB73_440412 [Zea mays]
Length = 629
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 148/339 (43%), Gaps = 29/339 (8%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G A ++ A F + G VY +S ++ AN+ +K V ND + + +
Sbjct: 182 LIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKANRMYKLVDNDIMIGFTKWT 241
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VEE + P+ ++ P D+L V+ E +D+IG V +S +IR K
Sbjct: 242 TVEELIEVPPAFPELVYSLTPFDQLTTLVDIREYFIDVIGAVTMISDVATIRTKMRQTQT 301
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR +T+ +E+ + V LW E AT+ AD+ I SL++ F G +
Sbjct: 302 AKRSVTIQNESCTPLEVVLWGEQATSF------PADQISIAGQDSLQIIIFVGTLARSYA 355
Query: 395 RSTVL---------VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
+T L V+P +PEA L + + + + MA GS + R ++
Sbjct: 356 GTTSLTCGSSCKWYVNPQVPEATSLAASLQHK-RSPIMAVAGS-----TQRVTRISTAEH 409
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC--E 503
++ I EK + ++++K DQ WY +C+ C KK T G Y C
Sbjct: 410 KKVSEIKHMHPFKHEKVEWL---ITVTVLKIDQLWWYESCRKCLKK-TKPHGDAYKCSDS 465
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
GC + RY ++ D +GE +F A+ I+
Sbjct: 466 GCGHVGPP-NPRYRLLITAGDETGETDFILFGRMAQHIV 503
>gi|414585088|tpg|DAA35659.1| TPA: hypothetical protein ZEAMMB73_284494 [Zea mays]
Length = 524
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 29/339 (8%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G A ++ A F + G VY +S ++ AN+ +K V ND + + +
Sbjct: 44 LIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKANRMYKPVDNDIMIGFTKWT 103
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
+EE + P+ ++ P D+L V+ E +D+IG V +S +IR K
Sbjct: 104 TIEELIEVPPAFPEIGYSLTPFDQLTTLVDIREYFIDVIGAVTMISDVATIRTKMRQTQT 163
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR +T+ +E+ + V +W AT+ AD+ I SL++ F G +
Sbjct: 164 AKRSVTIQNESCTPLEVVMWGGQATSF------PADQISIAGQDSLQIIIFVGTLARSYA 217
Query: 395 RSTVL---------VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
+T L V+P +PEA L + + + + M++ GS + R ++
Sbjct: 218 GTTSLTGGSSCKWYVNPQVPEATSLAASLQHK-RSPIMSAAGS-----TQRVPRISTAEH 271
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC--E 503
++ I EK + ++++K DQ WY +C+ C KK T G Y C
Sbjct: 272 KKVSEIKHLHPFKHEKVEWL---VTVTVLKIDQLWWYESCRKCLKK-TKPHGDAYKCSDS 327
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
GC + RY ++ D +GE +F A+RI+
Sbjct: 328 GCGHVGPP-NPRYRLLITAGDETGETDFILFGHMAQRIV 365
>gi|238616412|ref|XP_002399041.1| hypothetical protein MPER_00208 [Moniliophthora perniciosa FA553]
gi|215477155|gb|EEB99971.1| hypothetical protein MPER_00208 [Moniliophthora perniciosa FA553]
Length = 94
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
NWTIK RVT K +M+T+ N RGEG +FNV L DE G +I+ T FN A Y R GKV
Sbjct: 2 NWTIKARVTQKSDMKTWSNQRGEGKLFNVTLMDESG-EIRGTAFNAVADDLYGRLDEGKV 60
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
YYIS+ + +A K+F V NDYE++L N+E+EE
Sbjct: 61 YYISKAKVNLAKKKFSNVSNDYELSLERNTEIEE 94
>gi|12322096|gb|AAG51090.1|AC027032_10 hypothetical protein [Arabidopsis thaliana]
Length = 567
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 175/386 (45%), Gaps = 44/386 (11%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L + PY+ W ++V++ T N R + ++DE G ++ AT+ E KF
Sbjct: 8 LKDVRPYKNAWRVQVKILHSWKQYT-SNTRE---TIELVISDEHGKKMHATVKKELVSKF 63
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNF 294
+ +G+ +I L A+ QF+ + Y+M +EV +V+++ F+ F+
Sbjct: 64 VHKLIVGEWVFIEIFGLTYASGQFRPTNHLYKMAFQVRTEVMGCASVSDSNFLTLASFSK 123
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ EL ++ LVD IG + V + K+NN+ K D + D+ + V+LW
Sbjct: 124 IQSGELNPHM----LVDAIGQIITVGELEEL--KANNKRTTKIDFEIRDQMDERMQVTLW 177
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
A V + ++ K+ ++KSL ++ S V V+PD PE
Sbjct: 178 GTYAQEVYRACQESEGKNT-ASVKSLS---------NSFDASQVHVNPDFPEVHDFSQTL 227
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSD--RVSLTHITSNPSLGDEKPVFFSIKAYIS 472
++G + +A R+ YS+ R ++ ++ S+ +G + V +I A
Sbjct: 228 LNDGAICVFRARVPRFEMVAVK--RTDYSEYTRNTIENLLSSTEVGKVR-VLCTIYA--- 281
Query: 473 LIKPDQAMWYRACKTCNKKVTDALGSG------------YWCEGCQKNDEECSLRYIMVA 520
+ D A +Y +CKTCNKKV + + +G +WC+ C RY++ A
Sbjct: 282 -VDTDWAWYYISCKTCNKKV-NHIHAGVNGVNNKGKKPRFWCDTCTSVVTNVVSRYMIYA 339
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSA 546
+V D +GEA + +F+ IIG SA
Sbjct: 340 KVMDSTGEAKLLLFDSICSEIIGESA 365
>gi|297607725|ref|NP_001060485.2| Os07g0651500 [Oryza sativa Japonica Group]
gi|255678024|dbj|BAF22399.2| Os07g0651500 [Oryza sativa Japonica Group]
Length = 2021
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 152/367 (41%), Gaps = 30/367 (8%)
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ + G G +F+ +L D+ G I A ++ A + KVYYI T+R AN+
Sbjct: 1651 FCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTVRYANRT 1710
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV--------D 311
++ V N + ++ + EE + A P F+ P ++ V+ T D
Sbjct: 1711 YRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYVGLYGMQPD 1770
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++GV+ V +R KS N KR I + D + T+ V+LW E A + NA +
Sbjct: 1771 VMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERADAFDANSVYNAGQ 1830
Query: 372 SP---IVAIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTSMASI 426
+ IV + +L V D+ G+ L+ G S ++ D+PE +LK + + + S
Sbjct: 1831 TQAQVIVFVGTL-VKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRPVSWVD- 1888
Query: 427 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRA 484
N A D I +L K F + + I + + WY +
Sbjct: 1889 ---------NPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVTVRRICSENSWWYNS 1939
Query: 485 CKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
C+ C + + GS Y C C N RY +V D S A +F A R+I
Sbjct: 1940 CRLC-YRTSKPYGSSYKCSSCS-NIGIPDPRYKVVLIAGDASSNATFILFGRVAHRLIKK 1997
Query: 545 SADELNE 551
S + L E
Sbjct: 1998 SVESLIE 2004
>gi|302143227|emb|CBI20522.3| unnamed protein product [Vitis vinifera]
Length = 78
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 57/62 (91%)
Query: 323 MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKV 382
MSIRRKSN ++VPKRDIT+AD+TK++V VSLWN+ TNVGQELLDNADK PIVAIKSLKV
Sbjct: 1 MSIRRKSNKDIVPKRDITIADKTKKSVVVSLWNDHGTNVGQELLDNADKFPIVAIKSLKV 60
Query: 383 GD 384
G+
Sbjct: 61 GE 62
>gi|413948787|gb|AFW81436.1| hypothetical protein ZEAMMB73_509972 [Zea mays]
Length = 524
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 148/339 (43%), Gaps = 29/339 (8%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G A ++ A F + G VY +S ++ AN+ +K V ND + + +
Sbjct: 44 LIDEEGGSAHAQIYPPLAAVFKPMIKEGNVYNVSYVQIKKANRMYKPVDNDIMIGFTKWT 103
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
+EE + P+ ++ P D+L V+ E +D+IG V +S +IR K
Sbjct: 104 TIEELIEVPPAFPEIVYSLTPFDQLTTLVDIREYFIDVIGAVTMISDVATIRTKMRQTQT 163
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR +T+ +E+ + V LW AT+ AD+ I SL++ F G +
Sbjct: 164 AKRSVTIQNESCTPLEVVLWGGQATSF------PADQISIAGQDSLQIIIFVGTLARSYA 217
Query: 395 RSTVL---------VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
+T L V+P +PEA L + + + + M++ GS + R ++
Sbjct: 218 GTTSLTGGSSCKWYVNPQVPEATSLAASLQHK-RSPIMSAAGS-----TQRVPRISTAEH 271
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC--E 503
++ I EK + ++++K DQ WY +C+ C KK T G Y C
Sbjct: 272 KKVSEIKHLHPFKHEKVEWL---VTVTVLKIDQLWWYESCRKCLKK-TKPHGDAYKCSDS 327
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
GC + RY ++ D GE +F A+RI+
Sbjct: 328 GCGHVGPP-NPRYRLLITAGDEIGETDFILFGRMAQRIV 365
>gi|88191850|pdb|1YNX|A Chain A, Solution Structure Of Dna Binding Domain A (Dbd-A) Of
S.Cerevisiae Replication Protein A (Rpa)
Length = 114
Score = 103 bits (256), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/114 (43%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
TR + + L+PYQ WTIK RV+ KG ++T+ N RG+G +FNV D G +I+AT FN
Sbjct: 1 TRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDTSG-EIRATAFN 59
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
+ A KF + Q GKVYY+S+ L+ A QF + + YE+NL+ ++ +EE +E+
Sbjct: 60 DFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDES 113
>gi|384494556|gb|EIE85047.1| hypothetical protein RO3G_09757 [Rhizopus delemar RA 99-880]
Length = 500
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 137/581 (23%), Positives = 239/581 (41%), Gaps = 123/581 (21%)
Query: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLK---LTGN-RYMFNASDGKKRLKAI 56
M + +S AI I + + + P ++Q+++ + L G+ RY SDG +
Sbjct: 1 MSQLLSSGAIEAIYFDEVTNPLTKDP--ILQLINFRVVLLNGHVRYKAIVSDGIHFIPGW 58
Query: 57 LPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEME----IKI 112
L L + +G I+ ++R+ +Y+ N I K K++++ K + +S ++ + I I
Sbjct: 59 LYVCLGVLIENGQIKKNSIVRVKEYSCNLISNK--KWMLIQKVDFLSTDVQEKVGKPISI 116
Query: 113 EVKSDESGIIFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTR 172
E+ S S +I +Q ++D P + +EM + D P L +T
Sbjct: 117 ELGS-ASTMITNVQQWRLKRRDPPECQFQ--REMCIFESKTSASDITRASMPLPDLPIT- 172
Query: 173 RVHPLVSLNPYQG-NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
P+ LNPYQ TI+V+ E C+ + L G +I+AT FN
Sbjct: 173 ---PIKHLNPYQHIGTTIEVK---------------ELCLALISLIKVYG-EIKATAFNG 213
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
A++ IPQT
Sbjct: 214 QC----------------------------------------------AIDSA--IPQTN 225
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F+FV I +L + ++ + KR + + D+T+ + +
Sbjct: 226 FSFVKIIDL----------------EKTEKDETVENNLTGWQINKRSLLIIDDTEHPIQL 269
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
++W +A +++ +PI+A K L+V ++ G SLS T+ +P +PEA L
Sbjct: 270 TVWGSVAEEF------DSNNTPIIACKGLRVNEYNGRSLSLPTFGTLTKNPSIPEAHHLY 323
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT--HITSNPSLGDEKPVFFSIKA 469
W+ + + L SL + + V L H+ ++ +L +F +
Sbjct: 324 QWFSFKKQNIQQLI---SLKSLKGEKDNIPWINLVQLYNGHLNTSYTLD-----YFMFRG 375
Query: 470 YISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
IS IK D + Y C TC KK+ S + CE C+K + RY++ A + D SG+A
Sbjct: 376 TISYIKHD-TIAYPGCPTCAKKLQQK-ESSWECEQCKKILSVPNWRYVLFAGISDFSGQA 433
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
+ +IF+ A IIG +A EL ++ D S ++ KE T
Sbjct: 434 FFTIFDNVAVHIIGMTAAELLKIA-----DRSMEIFQKEFT 469
>gi|9294533|dbj|BAB02796.1| replication protein A1-like [Arabidopsis thaliana]
Length = 581
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 172/387 (44%), Gaps = 33/387 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L + PY+ +W +V+V + R Y GE V +DE G +I ++ + K+
Sbjct: 8 LTDVRPYKTSW--RVQVKTLHAWRQYTANTGE--TLEVVFSDETGKKIHCSVRKDLVSKY 63
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV--EEAVNETAFIPQTKFNF 294
+ +G+ +I +L A F+ + Y+M+ + V +V+++ ++ F
Sbjct: 64 ANMLTVGEWVFIETFSLNYAGGSFRPTSHLYKMSFVNGTSVIPSPSVSDSNYLTLATFEK 123
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ EL N T LVD+IG + + + ++NN+ K D + D + + V+LW
Sbjct: 124 IQSGEL----NPTMLVDVIGQIVMIGELEEL--EANNKPTTKIDFDIRDASDERIGVTLW 177
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLS-TLGRSTVLVSPDLPEAKKLKS 412
A V + + + + ++ +K+ ++G+ +LS + S V V+P PE
Sbjct: 178 GTFAQQVYRGCNEAGARPVVCVLRFVKIKSYKGVRNLSNSFDASQVFVNPQFPEVDAFLR 237
Query: 413 WYESEG-KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
+G T I ++K + R ++ + + +G + + I
Sbjct: 238 TLPQDGILLTYRERIPKLEIVVSKKSDSCLEYPRNTIQQLLNAVDVGKAR-----LMCTI 292
Query: 472 SLIKPDQAMWYRACKTCNKKVTDALGSG------------YWCEGCQKNDEECSLRYIMV 519
I D A +Y +C+ CNKKVT + SG +WC+ C+ RY++
Sbjct: 293 YAIDTDWAWYYISCRACNKKVTH-IHSGVHGVNNKGKKPRFWCDSCKTVVTNVIARYMIY 351
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSA 546
A+V D +GE+ + +F++ IIG +A
Sbjct: 352 AKVMDNTGESKLLLFDQICTEIIGETA 378
>gi|361069979|gb|AEW09301.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157669|gb|AFG61167.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157671|gb|AFG61168.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157673|gb|AFG61169.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157675|gb|AFG61170.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157677|gb|AFG61171.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157679|gb|AFG61172.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157681|gb|AFG61173.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
gi|383157683|gb|AFG61174.1| Pinus taeda anonymous locus UMN_2879_01 genomic sequence
Length = 94
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
Query: 375 VAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS-L 433
+A+++ KV D+ G+SLST GRST++++PDLP A+KL+SWY+++GKG+SMA + S L S
Sbjct: 1 IAVRAAKVSDYSGVSLSTTGRSTLMINPDLPVAQKLRSWYDTDGKGSSMAPVASTLPSGT 60
Query: 434 AKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIK 468
+ G+RS+YS+R L+ I PS+G+ KP +F+++
Sbjct: 61 PRAGSRSLYSERAFLSQIV-EPSVGEGKPAYFNVR 94
>gi|328726379|ref|XP_003248874.1| PREDICTED: replication factor A protein 1-like [Acyrthosiphon
pisum]
Length = 323
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 23/252 (9%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
NW+I VRV K N +Y+N RG G F L D+ T+I+A F + + + + Q V
Sbjct: 16 NWSITVRVLKKSNKISYQNERGTGKYFTTILIDK-TTEIRAKAFGDDCDRLFLQLQENNV 74
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF--IPQTKF--NFVPIDELG 301
Y I G +++A+K++ +NDYE+ E + + E T PQ K NF +D
Sbjct: 75 YNIKNGKIQLADKEYNNSKNDYEIFFKETTIIIEQFGFTDIPTHPQLKTIENFWSMD--- 131
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
+N L+D IGV+ + + I++K++N+ RDI + D+T +VTV LW+ A N
Sbjct: 132 --INT--LIDTIGVIIKIEKSKEIKKKNSNDTYKLRDIILKDKTGFSVTVVLWDTEAINF 187
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWY-ESEGK 419
NA++ I++I ++ F+ ++ +S G S +L++P + L+SWY E E K
Sbjct: 188 ------NANEGDIMSIIDGQIIVFKNVNKISVTGSSEILINPRWKVTEDLQSWYKEFEKK 241
Query: 420 ---GTSMASIGS 428
S SIGS
Sbjct: 242 ELLNLSQMSIGS 253
>gi|224139098|ref|XP_002326767.1| predicted protein [Populus trichocarpa]
gi|222834089|gb|EEE72566.1| predicted protein [Populus trichocarpa]
Length = 122
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED 220
N AR R+ P+ +LNPY G WTIK R +KG +R Y N RG+ V + +L D D
Sbjct: 4 NRGSVARNEAPPRIVPITALNPYHGRWTIKARAMTKGELRHYNNTRGDSKVLSSDLLDCD 63
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
G +I+AT N+ A +FY++ + G++Y IS+G L+ A + F +++D E+ L S ++
Sbjct: 64 GGEIRATCSNQVADQFYNQIEAGRIYLISKGNLKPAQRNFNHLRHDLEIFLESTSTIQ 121
>gi|15219131|ref|NP_175703.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|12324642|gb|AAG52278.1|AC019018_15 putative replication protein; 94555-97079 [Arabidopsis thaliana]
gi|332194750|gb|AEE32871.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
Length = 566
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 177/393 (45%), Gaps = 27/393 (6%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+L P++ +W I+V++ N T +G G + + L DEDG +IQA + E K
Sbjct: 12 NLKPFKTSWCIQVKILHAWNHYT----KGSGMSYEMMLADEDGNKIQAGIKKEHLLKLQR 67
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA--VNETAFIPQTKFNFVP 296
++G I ++ A+ +++ + Y +N+ ++ + +++ ++ FN
Sbjct: 68 YVKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQSSTRFSNSPTISDEIWLDLVNFN--- 124
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
D L ++ +LV++IG + NV + + + K D + D + SLW +
Sbjct: 125 -DVLSGTLDQNKLVNVIGQLVNVGEIQLLDVQG--KPTKKIDFQLRDTDDNRLPCSLWGK 181
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLS-TLGRSTVLVSPDLPEAKKLKSWY 414
A + + ++ I I+ K+G ++ I S+S S V ++P L E ++ K+
Sbjct: 182 FADQIHKVSKESVGGIVICLIRWAKLGHYKEIRSISNAFDASEVFINPILTEVEEFKNLL 241
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
S+G ++ L RS +R ++ + + S EK I I I
Sbjct: 242 PSDGLALTIMEPKPRFQPLRVREERSKQFERKTIAELKA--SFEVEK---VKIICSILSI 296
Query: 475 KPDQAMWYRACKTCNKKVTDA---LGSG-----YWCEGCQKNDEECSLRYIMVARVCDGS 526
D + +Y A CNKKV + L SG Y C+ C + RY + + D +
Sbjct: 297 DLDYSWYYYAHIKCNKKVFKSKKTLSSGAKKIIYRCDKCATDVTSIEARYWLHLDIMDNT 356
Query: 527 GEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
GE+ + +F+ E IIGC A EL ++ ++ D+
Sbjct: 357 GESKLMLFDSFVEPIIGCPATELLDVTNEQIDE 389
>gi|238585702|ref|XP_002390945.1| hypothetical protein MPER_09698 [Moniliophthora perniciosa FA553]
gi|215454988|gb|EEB91875.1| hypothetical protein MPER_09698 [Moniliophthora perniciosa FA553]
Length = 175
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 171 TRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
+R V P+ +LNPYQ NWTIK RVT K +M+ N G G F V L DE G +I+ T FN
Sbjct: 57 SRPVDPIQTLNPYQNNWTIKARVTRKSDMKARSNQYGVGKSFYVTLMDESG-EIRGTAFN 115
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
A Y R GK YYIS+ + +A+ + V +DYE+ L N+E+EE + +T+ +P
Sbjct: 116 AVADDLYGRLDEGKAYYISKAEVILASDKVSDVSSDYELWLERNTEIEECL-DTSNLPMV 174
Query: 291 K 291
K
Sbjct: 175 K 175
>gi|302792122|ref|XP_002977827.1| hypothetical protein SELMODRAFT_417572 [Selaginella moellendorffii]
gi|300154530|gb|EFJ21165.1| hypothetical protein SELMODRAFT_417572 [Selaginella moellendorffii]
Length = 372
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 156/352 (44%), Gaps = 33/352 (9%)
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS-RGTLRVANKQFKTVQNDYEMNL 271
+ ++ D GT+I+ ++ A D+ G VY S G +R +N+ + + +E+
Sbjct: 2 SFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRHSNQAYTPFEATWEIQA 61
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
N+ E A++E A P+ I + + VD++G+V + T+++ + +
Sbjct: 62 NKGMEFT-ALDEDAMFPRIVLAKTSILSACQKERDS-FVDVVGIVIWIG-TITVTSRDSG 118
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGIS 389
V KR + + D++ +V + LW+ A G + + D PI+ +K KV D+ G S
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
LS +G ST+L+ ++ L+ W T+ L+ + +R + S +L+
Sbjct: 179 LSAIGVSTILIELEMEAVADLREWMTLYYNVTNFI-------HLSTSSSRQIVSCTTTLS 231
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCE 503
I++ + A + +K D+ +Y AC + C KK T G++C
Sbjct: 232 EISN------------IVIATVKEMKTDE-FYYNACINVVNARQCGKKTTQT-ADGWFCS 277
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
C +Y + + D S W F E + I+G SA EL ++ +
Sbjct: 278 YCNIVSANMEFKYALKMCIEDSSSHMWAIAFQEATQEIVGMSAKELATMRDE 329
>gi|391335288|ref|XP_003742027.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 384
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 150/330 (45%), Gaps = 26/330 (7%)
Query: 178 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+ + P Q + + RV SK + T+ G VF+ ++ D T IQ FN+ +F
Sbjct: 55 LKMGPSQKKY--QFRVVSKKEIHTWSKGSSNGKVFSCQVADA-STDIQIVAFNDNCLQFS 111
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ Q + Y I R AN F T + E+ LN+ +++ T I + N+V
Sbjct: 112 EILQEHQEYDIEGFACRQANPIFNTTSSKLEIVLNKGTKIRALNRATLRIAEKSPNYVSF 171
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
EL + + ++VD+ GV+ +VSP RK + + + KR++ + DE ++ +T++LWNE
Sbjct: 172 SEL-QSMKENDIVDVCGVIIHVSPVEEFTRKRDGKPIVKRELRIVDEDRKILTINLWNE- 229
Query: 358 ATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAK--KLKSWYE 415
EL++ V+++ ++ F+G +LS+ S + DL + KL W+E
Sbjct: 230 --RTNTELVEKV----AVSVRHGRINIFRG-NLSSNCESASKIDSDLGNERLLKLSQWWE 282
Query: 416 SEGKGTSMASIGSGLGSLAK--NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
G S + + L K N + ++ + S P F +A I+
Sbjct: 283 KHGLEASGDNSSNRNSELMKTVNFEAAQREVKIEAGSVKS-------PPFVFWTRARIAT 335
Query: 474 IKPDQAMWYRAC--KTCNKKVTDALGSGYW 501
+ + M YRAC C KKV G Y+
Sbjct: 336 VAQNSLM-YRACAKTNCLKKVESQPGETYY 364
>gi|281210368|gb|EFA84534.1| putative ssDNA-binding protein [Polysphondylium pallidum PN500]
Length = 636
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 177/418 (42%), Gaps = 46/418 (11%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTD--EDGTQIQATMF-----NEAARKFYD 238
N TI+ V +K ++ + N+ G + N+EL D ++ +I+ T+F N + +
Sbjct: 181 NPTIRATVRAKSTIKQWHNSNSGGSILNLELIDDSDEKNEIKVTIFGRNNENNLCVQIDE 240
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+G Y S + N F + + E+ EN++ V+ T +NFV I
Sbjct: 241 AIHVGSTYDFSNFKINPKNPNFNKLSHPCELTFTENTKY--YVSSAPINAHTLYNFVKIA 298
Query: 299 EL---GRYVNGTELVDIIGVVQNVSPTMSIRRKSN------NEMVPKRDITVADETKRTV 349
+L + +D+ G V NVS T SI RK+ N + K + D + +++
Sbjct: 299 DLTPPAANETNSPPIDLFGYVSNVSGTTSINRKATSNTDNANSTLLKCTFRILDTSAKSI 358
Query: 350 TVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD--LPEA 407
V+ + + A + ++L +K I+AIKS K+ F S S ST V+P E
Sbjct: 359 DVTAFGQQAETISKQL----NKGNIIAIKSAKISSFSKCSASITYSSTYEVNPPQLQQEC 414
Query: 408 KKLKSWYESEGKGTSMASIG--SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF- 464
+ L W S G S +G S K+ R L ++ ++P L V
Sbjct: 415 QNLLMWVNSHGDDAECLSESYVAGGNSDDKDSIRCTVEVLPQL-NLGNDPILTKNYVVVG 473
Query: 465 -FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
S + +SL DQ Y C C KK C + Y R+
Sbjct: 474 TLSTLSNVSLTSNDQKSQYTGCSACKKK------------NCNCGQPQIKY-YRATFRLQ 520
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
D +G + F+ E+++G +A+ + QL D++ Q ++ E+ VP+L+R+ V
Sbjct: 521 DETGSVLVDAFSGTVEKMLGANAERFFD---QLTDEDRLQ-RVNEICSVPYLVRLRVT 574
>gi|340504872|gb|EGR31278.1| kelch motif family protein, putative [Ichthyophthirius multifiliis]
Length = 705
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 163/375 (43%), Gaps = 55/375 (14%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGC-VFNVELTDEDGTQIQATMFNEAARK 235
+ L P + K RVT KG R + +G +F +++ D + ++ T F + +
Sbjct: 334 IAELYPNIEQFKFKARVTKKGTKRNFTTKKGTNSYLFGIDIIDINQDEMSITFFEQEVDR 393
Query: 236 FYDRFQLGKVYYISRGTLRVA-NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
F D + G Y G ++ N Q+K + +M + ++++ A++E I Q K
Sbjct: 394 FIDIIEQGHTYIFQIGKIQSNDNNQYK--KGKIQMTASRDTQIM-AIDEDKRITQLKIER 450
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ ++ + ++ + +D+I +V N I K+ E PK++I + DE+ V +W
Sbjct: 451 KMLSDIQQ-LSKNDKIDVICLV-NKEERKIITLKTG-EQRPKKEIFIFDESGVEVEFDIW 507
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+ G ++ N K I+ IK KVG++ G K W
Sbjct: 508 GD----EGDQMTYN--KGDILLIKDGKVGEYNG--------------------NKFLQW- 540
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLI 474
S + + N D S N L + ++ I+A+I +
Sbjct: 541 ------------SSFMTQIITN------PDPQSFKDAKLNNQLDENLKIWTEIRAFILRV 582
Query: 475 KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
K D ++Y AC C KK+ + G ++C+ C +N E RYI + D SG+ W++ +
Sbjct: 583 K-DTPLYYNACPKCLKKIREE-GDSWYCQSCLENRSEPQARYISSICIGDASGQIWVNAY 640
Query: 535 NEEAERIIGCSADEL 549
+E A I+GCSADE
Sbjct: 641 DEVAREILGCSADEF 655
>gi|413923515|gb|AFW63447.1| hypothetical protein ZEAMMB73_293789 [Zea mays]
Length = 520
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 24/382 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P N I+VR+ K R N G N+ L DE GT I A +
Sbjct: 5 PIAELDPKSTNAAIRVRIIRKWEFRGATN-DGPLRHVNLILADEQGTAIHAEIQAALVDD 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY + R + + +K V N + ++ + + P+ +
Sbjct: 64 KGSLIQIDKVYELKRFRVTPSRNYYKPVDNSMMIQFTLYTQAKVVEDPPPTFPRYAYKLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ +G V N T L+D++G++ + + ++N + RDI + D + V+LW
Sbjct: 124 SFENIGNNVDNKTYLIDVLGILTEIGSLHHVGYNNSNII---RDIFLKDINNTSTKVTLW 180
Query: 355 NELATNVGQE-LLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVSPDLPEAK 408
A++ + + D+ D P+V L VG F+G + LS T +PD+PEA+
Sbjct: 181 GHQASSFSVDNIYDDNDNKPVVV---LFVGCLAKRFKGEAYLSATAACTWYFNPDIPEAQ 237
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLGDEKPVFFSI 467
Y S+ T + I ++++ D+ + +P + E F
Sbjct: 238 V----YYSKLLNTKLQMIRPQATEKELQASQTLNIEDKTIEELLQLDPDMFPEHG--FKC 291
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
IS + D W+ +C CNK + +GY C C N E RY + DG+
Sbjct: 292 TVTISRLVQDGRWWFPSCIKCNKSSSQT-STGYQCTSC--NGTETGFRYKLNFIATDGTS 348
Query: 528 EAWISIFNEEAERIIGCSADEL 549
EA F+ A+RI+G S L
Sbjct: 349 EAEFFCFDSIAKRIVGKSCQTL 370
>gi|440803406|gb|ELR24309.1| replication protein A1, putative, partial [Acanthamoeba castellanii
str. Neff]
Length = 1326
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 21/262 (8%)
Query: 159 NGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGN--MRTYKNARGEGCVFNVEL 216
G AA + + P+ +LNP+ WTI+VRV + KN + EG F +L
Sbjct: 981 TGRFQAAASTTASDGLTPVSALNPFSVAWTIEVRVVYLPTELFKWQKNGK-EGRHFCCDL 1039
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
D++G I+A +N A + R + ++Y IS G +VANK++ + +DY++ +
Sbjct: 1040 MDKNGDCIRAVAYNAVADDIFPRLKENQIYRISGGHFKVANKKYSKLSHDYDLTFATTTL 1099
Query: 277 VEEAVNET--AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
+ + T A P + +F+P+ +L + D + V P SI ++ ++
Sbjct: 1100 IIPITDPTRIAAFPTQQPDFLPLSQLASREH-----DEVA----VGPLGSITARTTGNVI 1150
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTL 393
PKR + + D+T+ V ++LW + A N L N D ++A+ V F+G +LST
Sbjct: 1151 PKRSVFLEDQTRSIVELTLWYDDAKNAAT-LFKNGD---VLAVTGAWVNRFRGHTTLSTK 1206
Query: 394 GRSTVLV--SPDLPEAKKLKSW 413
S L S P+ L W
Sbjct: 1207 HASYKLHVNSSAFPQTAALVQW 1228
>gi|296083354|emb|CBI22990.3| unnamed protein product [Vitis vinifera]
Length = 69
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 346 KRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
K+TV VSLWN+ ATNVGQELLDNADK PIVAIKSLKVGDFQ +SLSTL S VLV+PD
Sbjct: 9 KKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQVVSLSTLSESIVLVNPD 66
>gi|302826559|ref|XP_002994724.1| hypothetical protein SELMODRAFT_432625 [Selaginella moellendorffii]
gi|300137041|gb|EFJ04211.1| hypothetical protein SELMODRAFT_432625 [Selaginella moellendorffii]
Length = 320
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 18/255 (7%)
Query: 309 LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDN 368
V+++G+V + T+++ + + V KR + + D++ +V + LW+ A G + +
Sbjct: 33 FVNVVGIVIWIG-TITVTSRDSGAFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQER 91
Query: 369 ADKS--PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI 426
D PI+ +K KV D+ G SLS +G ST+L+ P++ L+ W T+
Sbjct: 92 IDSGVQPIICVKGGKVSDYNGKSLSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFI-- 149
Query: 427 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC- 485
L+ + +R S +L+ I++ E + + A + +K D+ +Y AC
Sbjct: 150 -----HLSTSSSRQTVSHTTTLSEISNMQLKVLESSPIYRVIATVKEMKTDE-FYYNACI 203
Query: 486 -----KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
+ C KK T G++C C +Y + + D S W F E A+
Sbjct: 204 NVVNARQCGKKTTRT-ADGWFCSYCNIESANMEFKYALKMCIEDSSSHVWAIAFQEAAQE 262
Query: 541 IIGCSADELNELKSQ 555
I+G SA EL ++ +
Sbjct: 263 IVGMSAKELATMRDE 277
>gi|57899172|dbj|BAD87224.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|57900302|dbj|BAD87135.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 609
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 140/354 (39%), Gaps = 40/354 (11%)
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G I M+ A GK+YYI T++ AN+ ++ V ND+ + ++ + +EE
Sbjct: 36 GNSIHVQMYRGAIEVLKPLIHEGKIYYIESFTVKDANRTYRPVSNDFMILFSKWTTLEEC 95
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
++ A P F+ E+ V VDI+GV+ +S T +R +S + KR +
Sbjct: 96 IDIPADFPTITFSLTHFQEIPSLVGKNIFYVDIMGVITEISSTSIVRPRSRDADSLKRTL 155
Query: 340 TVAD-----------ETKRTVTVSLWNELATNVGQELL--DNADKSPIVAIKSLKVGDFQ 386
+ D + T+ V+LW + +T E + D K +V V D+
Sbjct: 156 QICDASYTNFTVNAKHSNSTLPVTLWGDRSTAFDAEKIYKDGQTKPQVVVFVGTLVRDYA 215
Query: 387 GISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSD 444
GI L+ G S ++ D+P+ KLK + S+ +N A + D
Sbjct: 216 GIGLTITGSSPCKWYINLDIPDVLKLKESF----------SVNFQPIKWVENAAPAFNQD 265
Query: 445 RVSLTHITSNPSLGDE--KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC 502
I L K F + I I + WY +C C + + GS Y C
Sbjct: 266 TPEEKTIKEILKLNPHKYKRARFIVNVTIKSIHDENCWWYNSCDRCC-RTSKPYGSTYRC 324
Query: 503 EGCQKNDEECSL-----RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNE 551
C C + RY +V D + EA +F A R+I + L E
Sbjct: 325 SSC------CYIGMPVPRYKVVLTTADNTSEAAFVLFGRIAHRLIHRPVESLIE 372
>gi|4895168|gb|AAD32756.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 458
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 153/351 (43%), Gaps = 22/351 (6%)
Query: 209 GCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYE 268
G F++ L+D G +I A++ E +F G+ I L A QFK + Y+
Sbjct: 4 GETFDMVLSDVRGKKIHASVKREHLNRFERLIVPGEWRAIENFGLTYATGQFKATDHRYK 63
Query: 269 MNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIR 326
M + V + ++++ F+ T FN D L +N L+D++G + NV +I
Sbjct: 64 MGFMAQTRVVRIDPLSDSYFLSLTAFN----DVLNGGLNQNYLIDVVGQIVNVGEMETI- 118
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ 386
+N+ K D + D+ + +LW A V + I ++ K+ ++
Sbjct: 119 -DVHNQPTKKIDFELRDQKDERLPCTLWGSFAEQVFTACEAANGEMIICLVRFAKLKTYK 177
Query: 387 GI-SLS-TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM--ASIGSGLGSLAKNGARSMY 442
+ S+S S +L++PDLPE + K + ++ + S + +
Sbjct: 178 DVRSISNAFNTSQILINPDLPEILEFKDALPKDCLALTLIESKPKSKIDEFPTGDFYLQF 237
Query: 443 SDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTD----ALGS 498
+ + ++ ++ +G K + I I D + +Y CK CNKKVT +L +
Sbjct: 238 AKK-TIKEVSEMFDVGRVK-----VLCTIYDIDRDWSWYYIVCKKCNKKVTKVVMTSLKA 291
Query: 499 GYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
WCE C+ RY + +V D SGE + +F+ + I+GC A+ L
Sbjct: 292 QLWCETCRAPITNVLARYKLHVKVMDSSGEMKLMLFDAMSSEIVGCPANNL 342
>gi|348685631|gb|EGZ25446.1| hypothetical protein PHYSODRAFT_479463 [Phytophthora sojae]
Length = 263
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 14/255 (5%)
Query: 174 VHPLVSLNP-YQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
V + NP + W+ R+ ++ +RT+K+ R G +F V +TD D ++ T+FNE
Sbjct: 19 VFTIADFNPEIRAPWSFIGRILARSPVRTFKSWRASGRLFRVHVTDRDDATLRVTVFNEG 78
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
A +F+D G V S G + AN F + E++ ++ + + + P+ F
Sbjct: 79 AERFFDVLSPGAVCSFSNGRITTANSVFAPPSSPIELSFGGDANIHRVTDGPDY-PEPAF 137
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
++ + +L + G+V +V P I ++ + + KR+ + D++ V +
Sbjct: 138 AYIRLADL-----PAATPTVSGIVVDVGPLRDITTRAGRKTL-KREFLLVDDSNVDVVCT 191
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG-RSTVLVSPDLPEAKKLK 411
W + A EL D+ PI+ I++ ++ D+ I +G RST+L P + L+
Sbjct: 192 AWGQDA----DELQDSLQGHPIL-IQNGQISDYMNIRSVDIGVRSTLLHHPATSRSADLQ 246
Query: 412 SWYESEGKGTSMASI 426
W+ G + S+
Sbjct: 247 RWFAGLPAGHAFTSM 261
>gi|328865102|gb|EGG13488.1| putative ssDNA-binding protein [Dictyostelium fasciculatum]
Length = 669
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 158/345 (45%), Gaps = 35/345 (10%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ---IQATMFNEA-AR 234
+L+ G++TI V +K +++ +KN G +F+VE D+ + I+AT+F +
Sbjct: 209 ALSEGMGSYTICAVVKNKSDIKEWKNVTSSGRLFSVEFADDSPSTCNTIKATVFGDPYCA 268
Query: 235 KFYDRFQLGKVYYIS-RGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT--- 290
+ + + GK Y +S G +R +++F ++ YE+ L ++ + +++ I
Sbjct: 269 SLHQQLEAGKTYMVSGSGGVRKNSQKFNNTKHQYELTLGRDTTITPVTDQSQVIKSAGVV 328
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN----NEMVPKRDITVADETK 346
KF F PI+ L + +VD++G V +VS + I K+ ++++PK IT+ D T
Sbjct: 329 KFQFTPINSLVS-LGANMMVDVLGEVTSVSTPIDITTKATERAKSKVLPKWAITIRDNTN 387
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLP 405
+ VS W + + L+ IV IK+ K+ F G SLS S +++ P L
Sbjct: 388 SGIEVSFWGDDVA----KYLNQITVGMIVGIKNAKLTQFNGHSLSFGYSSEIVLDPRHLD 443
Query: 406 EAKKLKSWYESEGKGTSMASI---GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
+ + + W + GT+ AS+ + G+ A + L I + P + P
Sbjct: 444 QYEGFRQWI-AHNSGTNCASLTQRSTFTGNSTNKDAPVL--TVAELLAIQTEPFDANNNP 500
Query: 463 ----VFFSIK--AYISLIKPDQA-----MWYRACKTCNKKVTDAL 496
V +I+ A+ I D WY C C KKV L
Sbjct: 501 NQYVVHGTIRRGAFAKEISRDNGPTVSTCWYEGCAGCFKKVCGGL 545
>gi|297725313|ref|NP_001175020.1| Os07g0113000 [Oryza sativa Japonica Group]
gi|255677455|dbj|BAH93748.1| Os07g0113000 [Oryza sativa Japonica Group]
Length = 1790
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 137/331 (41%), Gaps = 19/331 (5%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G I A +F + F GKVYY+ ++ +NK ++ V N M + +
Sbjct: 1263 LVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWT 1322
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE+ ++ P + P++E+ +V+ E VD+IG + +S +R KS +
Sbjct: 1323 SVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVDVIGFITEISTPTMLRPKSRDASS 1382
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLK--VG-DFQGISLS 391
KR I + D T+ VSLW E A E + A + ++ S +G +FQ I L
Sbjct: 1383 LKRIIQICDANNSTLNVSLWAEQALAFDAESIHKAGQRLALSRGSACKWIGANFQPIKL- 1441
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI 451
L T ++ + + K ++ + A N A D+ +
Sbjct: 1442 -LQAPTTNIADENADDKTVRELLDMNPHKNRAP---------ATNIADENADDKTVRELL 1491
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEE 511
NP + F I I D + WY +C+ C +V G Y C GC N
Sbjct: 1492 DMNPH--KNRRTRFQANVTIRKICNDSSWWYNSCEKC-LRVVKPFGYTYKCTGCY-NIAM 1547
Query: 512 CSLRYIMVARVCDGSGEAWISIFNEEAERII 542
RY + D + +A +F + A+RI+
Sbjct: 1548 AVPRYKLSVLAGDDTADAVFILFGKIAQRIV 1578
>gi|57899579|dbj|BAD87158.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|57899664|dbj|BAD87333.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 1083
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 24/333 (7%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G I A +F + F GKVYY+ ++ +NK ++ V N M + +
Sbjct: 557 LVDEKGGSIHAQIFPLLLQVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWT 616
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE+ ++ P ++ P++E+ +V+ E VD+IGV+ +S +R KS +
Sbjct: 617 SVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVDVIGVITEISTPTMLRPKSRDASS 676
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLST 392
KR + + T+ VSLW E A E + A +S IV ++ GI L+
Sbjct: 677 LKRTVQICYANNSTLNVSLWAEQALAFDAESIHKAGQSEPQIVLFVGTLAKNYPGIGLA- 735
Query: 393 LGRSTVL---VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
L R +V ++ ++P+ LK+ + + + L + N A D+
Sbjct: 736 LSRGSVCKWYININVPKMVDLKNRIGANFQPIKL------LQAPTTNIADENADDKTVRE 789
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKND 509
+ NP + F I I D + WY +C+ C +V G Y +
Sbjct: 790 RLDMNPH--KNRRTRFQANVTIRKICNDSSWWYNSCEKC-LRVVKPFGYTY--------N 838
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
E RY + D + +A +F + A+RI+
Sbjct: 839 EIIMYRYKLSVLAGDDTADAVFILFGKIAQRIV 871
>gi|390352290|ref|XP_800067.3| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 275
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 14/216 (6%)
Query: 40 NRYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKC 99
+RY SDG+ A+L + L+ V +G + K ++L +Y+ N I + ++V
Sbjct: 42 DRYRLMLSDGEHTCTAMLATQLNEMVSTGELDVKAAMKLKNYSCNPI-ANDRRVIVVLDL 100
Query: 100 EVVSPALEMEIKI----EVKSDESGIIFKPKQE---DEVKKDGPGIVLKPKQEMVAKSAA 152
++V E+ + I +++ G +Q+ D P +P A+
Sbjct: 101 DIVKKGSEIGVSIGDPTPMRAPGQGGAAPAQQQSRPDSTVSHDPPQTARPTSYGTGAPAS 160
Query: 153 QILRDQN-----GNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG 207
Q N A ++V P+ SL PYQ WTIK RVT+K +RT+ NARG
Sbjct: 161 ATPNKQGTFYGQSNSAMGGSTTSPKKVQPISSLTPYQNRWTIKARVTNKTAIRTWSNARG 220
Query: 208 EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLG 243
EG +F+++L D+ G +I+ T F + K+Y+ ++G
Sbjct: 221 EGKLFSMDLLDQSG-EIRCTAFKDMVDKYYEMIEIG 255
>gi|22831301|dbj|BAC16155.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|24414047|dbj|BAC22296.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 566
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 19/307 (6%)
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
GKVYY+ ++ +NK ++ V N M + + VE+ ++ P + P++E+
Sbjct: 57 GKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLTPLNEVSN 116
Query: 303 YVNGTE-LVDIIGVVQNVS-PTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
+V+ E VD+IG + +S PTM +R KS + KR I + D T+ VSLW E A
Sbjct: 117 FVDKNESFVDVIGFITEISTPTM-LRPKSRDASSLKRIIQICDANNSTLNVSLWAEQALA 175
Query: 361 VGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVL---VSPDLPEAKKLKSWYE 415
E + A +S IV ++ GI L+ L R + ++ ++PE LK+
Sbjct: 176 FDAESIHKAGQSEPQIVLFVGTLAKNYPGIGLA-LSRGSACKWYININVPEMVDLKNRIG 234
Query: 416 SEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
+ + + L + N A D+ + NP + F I I
Sbjct: 235 ANFQPIKL------LQAPTTNIADENADDKTVRELLDMNPH--KNRRTRFQANVTIRKIC 286
Query: 476 PDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
D + WY +C+ C +V G Y C GC N RY + D + +A +F
Sbjct: 287 NDSSWWYNSCEKC-LRVVKPFGYTYKCTGCY-NIAMAVPRYKLSVLAGDDTADAVFILFG 344
Query: 536 EEAERII 542
+ A+RI+
Sbjct: 345 KIAQRIV 351
>gi|302825229|ref|XP_002994245.1| hypothetical protein SELMODRAFT_432174 [Selaginella moellendorffii]
gi|300137892|gb|EFJ04690.1| hypothetical protein SELMODRAFT_432174 [Selaginella moellendorffii]
Length = 982
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 146/339 (43%), Gaps = 40/339 (11%)
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS-RGTLRVANKQFKTVQNDYEMNL 271
+ ++ D GT+I+ ++ A D+ G VY S G +R +N+ + + +E+
Sbjct: 2 SFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRRSNQAYTPFEATWEIQA 61
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNN 331
N+ E A++E A P+ I + + VD++G+V + T+++ + +
Sbjct: 62 NKGMEFT-ALDEDATFPRIVLAKTSILSACQKERDS-FVDVVGIVIWIG-TITVTSRDSG 118
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGIS 389
V KR + + D++ +V + LW+ A G + + D PI+ +K KV D+ G S
Sbjct: 119 TFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGKS 178
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
LS +G ST+L+ P++ L+ W ++Y + +
Sbjct: 179 LSAIGVSTILIEPEMEAVADLREWM-------------------------TLYYNVTNFI 213
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWCE 503
H++++ S + + + IS ++ + +Y AC + C KK T G++C
Sbjct: 214 HLSTSSS--RQTVSCTTTLSEISNMQLKMSFYYNACINVVNARQCGKKTTRT-ADGWFCN 270
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
C +Y + + D S W F E + I+
Sbjct: 271 YCNFESANMEFKYALKMCIEDSSSHVWAIAFQEATQEIV 309
>gi|226508478|ref|NP_001142593.1| uncharacterized protein LOC100274860 [Zea mays]
gi|195607088|gb|ACG25374.1| hypothetical protein [Zea mays]
Length = 549
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 177/425 (41%), Gaps = 19/425 (4%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L P++ + TI+V VT K ++ A + +V+ L+D+ G I A + A
Sbjct: 6 LTDLEPHKKHATIQVCVTRKW---LFRGANDNAPLQHVDMILSDQKGNAIYAEIPANLAN 62
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + G++Y ISR + A FK V D + + V+ ++ P+ +
Sbjct: 63 QKAPDIEEGRIYNISRFRVCAAKNGFKVVDGDKMIQFTFYTIVKRVIDPPTVFPKYIYRL 122
Query: 295 VPIDELGRYVNG-TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
P D++ + +D++GV+ V I +S V R I + D + + ++L
Sbjct: 123 TPFDQIESNIQTKPNFLDVLGVIIQVHELTPIHIQSQLNPVLTRSIIIEDLSNTPLKITL 182
Query: 354 WNELATNVG-QELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLK 411
W + AT+ ++ D K PI+ + + F +G+ LS +P +PEA +
Sbjct: 183 WADQATSFSLHDVYDPNTKKPIIVLFVGCLPKFYKGVYLSGGSACRWYFNPTIPEA---E 239
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYI 471
++ S+ T + L + + I NP D + + I
Sbjct: 240 PYHTSQQTRTIALQLPHALNHPPTIENKEAAESKSLYDLIRINPY--DFPEIGYECTVTI 297
Query: 472 SLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWI 531
+ I + WY AC C K T + Y C C N ++ + RY + DG+ A +
Sbjct: 298 TEIPVENKWWYPACTKCFKASTPQ-NTVYHCNDC--NWDKYTFRYKLKFLASDGTETAEM 354
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
FN A +I+G S + + L+ + + +S L ++ + RV+V Q + E
Sbjct: 355 FCFNNIARQIVGKSREVV--LRG-VSEHSSIPPDLAQIISLKFTFRVTVDDQSFFQENNH 411
Query: 592 RVTVR 596
+R
Sbjct: 412 PNVLR 416
>gi|328700730|ref|XP_003241367.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 323
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 128/248 (51%), Gaps = 20/248 (8%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W+I RV K ++ +K G G F L D+ T+I+AT F + + + Q VY
Sbjct: 17 WSITARVLKKSDVLPFK--HGNGKYFTTILIDK-TTEIRATAFGNDVDRLFSQLQENNVY 73
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA-VNETAFIPQTKFNFVPIDELGRYVN 305
I G ++ A+K + +NDYE+ N + +E + V + PQ K I+++
Sbjct: 74 NIKNGEIKEADKAYNKSKNDYEIIFNGLTVIERSGVTDIPSHPQLK----TIEKVFSMDK 129
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
T L+D IGV+ + + I++ ++N+ + R+I +AD++ VTV+LW+ ATN
Sbjct: 130 NT-LIDTIGVIIKIEQSKKIKKINSNDTLILRNIILADKSGVRVTVTLWDTEATNF---- 184
Query: 366 LDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSWY-ESEGK---G 420
NA++ ++I K+ D++ + +S G S + ++P+ E L++WY E E K
Sbjct: 185 --NANEGDTMSIIGGKIIDYKNVKKISVTGSSKIEINPNWNETLHLQNWYKEFEKKKLLN 242
Query: 421 TSMASIGS 428
S IGS
Sbjct: 243 LSQVCIGS 250
>gi|297613121|ref|NP_001066722.2| Os12g0454300 [Oryza sativa Japonica Group]
gi|255670281|dbj|BAF29741.2| Os12g0454300 [Oryza sativa Japonica Group]
Length = 1051
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
H L+S L+ N IK RV+ + + R + ++ L DE G I A M+
Sbjct: 538 HILISQLSCGDSNIRIKARVSRLWDFHDLNDDR-KIVHTDLVLLDETGNSIHAQMYQHVI 596
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
Q GKVYYI T+R AN+ ++ V + + + + +EE V+ A P F+
Sbjct: 597 VNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFS 656
Query: 294 FVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
P ++ V+ VDI+GV+ + T ++R +S N KR + + D + T+ ++
Sbjct: 657 LTPFGDVPSLVDKNIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLT 716
Query: 353 LWNELATNVGQELLDNA-DKSP-IVAIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAK 408
LW E AT E + NA + P +V V +++G+ L+ G S ++ ++PE
Sbjct: 717 LWGERATAFDAENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPEVV 776
Query: 409 KLKSWYE 415
+LK Y+
Sbjct: 777 ELKERYK 783
>gi|77555321|gb|ABA98117.1| hypothetical protein LOC_Os12g26850 [Oryza sativa Japonica Group]
Length = 1201
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
H L+S L+ N IK RV+ + + R + ++ L DE G I A M+
Sbjct: 688 HILISQLSCGDSNIRIKARVSRLWDFHDLNDDR-KIVHTDLVLLDETGNSIHAQMYQHVI 746
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
Q GKVYYI T+R AN+ ++ V + + + + +EE V+ A P F+
Sbjct: 747 VNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFS 806
Query: 294 FVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
P ++ V+ VDI+GV+ + T ++R +S N KR + + D + T+ ++
Sbjct: 807 LTPFGDVPSLVDKNIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLT 866
Query: 353 LWNELATNVGQELLDNA-DKSP-IVAIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAK 408
LW E AT E + NA + P +V V +++G+ L+ G S ++ ++PE
Sbjct: 867 LWGERATAFDAENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPEVV 926
Query: 409 KLKSWYE 415
+LK Y+
Sbjct: 927 ELKERYK 933
>gi|194904084|ref|XP_001980998.1| GG17468 [Drosophila erecta]
gi|190652701|gb|EDV49956.1| GG17468 [Drosophila erecta]
Length = 228
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 18/244 (7%)
Query: 176 PLVSLNPYQGNWT-IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P+ SL P N T IK RVT K + + NA +G +F + L DE G +I +FN
Sbjct: 1 PICSLLPTLCNMTSIKARVTWKSEITQWNNAGKDGIIFIMNLLDESG-EITGVVFNNLIN 59
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
FY + Q G VY SR ++ A FK +N + + L N+ VE + +E IP+ +NF
Sbjct: 60 AFYGQIQTGLVYIFSRFQVQQAENCFKVSKNPFAVFLLWNTVVELSASER--IPRETYNF 117
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+P+ E+ + E VD IG+ V + + + + R+I + D + V ++LW
Sbjct: 118 LPLSEVSTKPD-KEPVDAIGICTEVR---DLDHRGGHSI---REILLVDPDYQPVMLNLW 170
Query: 355 NELATNVGQELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLKSW 413
+ A N D ++ +K + I L+ + V ++PD+P+A + W
Sbjct: 171 EKEAENFEGRPDD------VIVVKGARAQPHNNAIKLNASWYTNVQINPDIPDATSMLEW 224
Query: 414 YESE 417
Y ++
Sbjct: 225 YRNQ 228
>gi|413952523|gb|AFW85172.1| hypothetical protein ZEAMMB73_007991 [Zea mays]
Length = 504
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 159/382 (41%), Gaps = 24/382 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P N I+VR+ K R N G N+ L DE GT I A +
Sbjct: 5 PIAELDPRSTNAAIRVRIIRKWEFRGATN-DGPLRHVNLILADEQGTTIHAEIQAALVAD 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY + R + + +K V N + ++ + + P+ +
Sbjct: 64 KDSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKVVKDPPPNFPRYAYKLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+++ V N T L+D++G++ + + ++N + RDI + D + V+LW
Sbjct: 124 SFEDISDNVDNKTYLIDVLGILTEIGSLHHVGYNNSNII---RDIFLKDINNASTKVTLW 180
Query: 355 NELATNVGQE-LLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVSPDLPEAK 408
A++ + + D D P+V L VG F+G + LS T +PD+PEA+
Sbjct: 181 GHQASSFSVDNICDENDNKPVVI---LFVGCLAKRFKGEAYLSATAACTWYFNPDIPEAQ 237
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLGDEKPVFFSI 467
Y ++ T + I + +++ D+ + +P + E+ F
Sbjct: 238 ----MYYNKLLNTKLHMIRPQATAEELQASQTPNIEDKTIEELLQLDPDMFPEQG--FRC 291
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
IS + + W+ +C CNK + +GY C C N E RY + DG+
Sbjct: 292 TVTISRLVQNGRWWFPSCIKCNKSSSQT-STGYQCTSC--NGTETEFRYKLSFIATDGTS 348
Query: 528 EAWISIFNEEAERIIGCSADEL 549
EA F+ A RI+G S L
Sbjct: 349 EAEFFCFDTIARRIVGKSCQTL 370
>gi|300120592|emb|CBK20146.2| unnamed protein product [Blastocystis hominis]
Length = 362
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 176 PLVSLNPYQGN-WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P+ +++PY N W I+ RVT+K ++RT+ NARGEG +F+V+L D+D +I+ T F E
Sbjct: 231 PISAIHPYLTNGWFIRCRVTNKSSIRTFNNARGEGKLFSVDLLDKDSGEIRVTFFTEMVD 290
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM 269
FY+ ++GKVY + A KQF T+ N+YE+
Sbjct: 291 TFYNYLEVGKVYDFCNFKIGFARKQFNTLNNEYEL 325
>gi|402073226|gb|EJT68830.1| hypothetical protein GGTG_13608 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 230
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V+P+ S++PYQ W IK RVTSK ++RT+ +G +F+V L DE G +I+AT FN
Sbjct: 121 VYPIESISPYQHKWAIKARVTSKSDIRTWHKPSEKGKLFSVNLLDETG-EIKATGFNNEC 179
Query: 234 RKFYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEM 269
KFY+ Q +VYYIS +++A KQF + NDYE+
Sbjct: 180 DKFYELLQENQVYYISSPCRVQMAKKQFTNLPNDYEL 216
>gi|226506010|ref|NP_001152059.1| retrotransposon protein [Zea mays]
gi|195652219|gb|ACG45577.1| retrotransposon protein [Zea mays]
Length = 525
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 159/383 (41%), Gaps = 26/383 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P N I+VRV K R N G N+ L DE GT I A + A
Sbjct: 5 PVAELHPQSTNVVIRVRVIRKWEFRGATN-DGPLQHINLVLADEQGTPIHAEIAAALAVD 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
++ KVY + R + + FK V N++ + ++ + + P+ +
Sbjct: 64 KGSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ + + N T L+D++G++ ++P I NN + RDI + + + ++ ++LW
Sbjct: 124 CFENIEDNIDNRTYLIDVLGMLTQINPPHLI--GYNNSTI-IRDIFIKNTSDMSLKITLW 180
Query: 355 NELATNVG-QELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLK 411
A+ ++ ++ PIV + F+G LS+ S+ +P +PEA+
Sbjct: 181 GNQASGFSINDVYSQSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQT-- 238
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY- 470
Y + + + I + S +L H T L D P F + Y
Sbjct: 239 --YYNRLQNNDLQLIQPTAAE-----EEILLSQPPNLEHKTVE-ELLDIDPDMFPPEGYR 290
Query: 471 ----ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
IS I + WY +C C+K + +GY C C D + RY + DG+
Sbjct: 291 CTVTISRIVENSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRYKLSFIATDGT 347
Query: 527 GEAWISIFNEEAERIIGCSADEL 549
EA F+ A +I+G D L
Sbjct: 348 CEAEFFCFDSIARKIVGKPCDNL 370
>gi|3695387|gb|AAC62789.1| contains similarity to replication protein A1 [Arabidopsis
thaliana]
gi|10177641|dbj|BAB10788.1| replication protein A1-like [Arabidopsis thaliana]
Length = 1073
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 57/367 (15%)
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAV 281
+ AT+ E KF + +G+ +I L A+ QF+ + Y+M +EV +V
Sbjct: 1 MHATVKKELVSKFVHKLIVGEWVFIEIFRLTYASSQFRPTNHLYKMAFQVRTEVMGCASV 60
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+++ F+ F+ + EL ++ LVD IG + V + ++NN+ K D +
Sbjct: 61 SDSNFLTLAPFSKIQSGELNPHM----LVDAIGQIITVGELEEL--EANNKPTTKIDFEI 114
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI------------- 388
D+ + V+LW A V + ++ K+ I I+ K+ ++GI
Sbjct: 115 RDQMDERMQVTLWGTYAQQVYRACQESEGKNVIFLIRFAKIKSYKGIFSFFVPIPFLSIL 174
Query: 389 ---------------SLS-TLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS 432
SLS + S V V+PD PEA ++G +
Sbjct: 175 HDLWSLKCYETAGVKSLSNSFDASQVHVNPDFPEAHHFSQTLPNDGAICVYRTRVPRFEM 234
Query: 433 LA-KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKK 491
+A K S+Y+ R ++ + S+ +G + + I I D A +Y +CKTCNKK
Sbjct: 235 VAVKRIDYSVYT-RNTIEDLLSSTEVGKVR-----VLCTIYAIDTDWAWYYISCKTCNKK 288
Query: 492 VTDALGSG------------YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
V + + +G +WC+ C+ RY++ A+V D + EA + +F+
Sbjct: 289 V-NHIHAGVNGVNNKGKKPKFWCDTCKSVVTNVVSRYMIYAKVMDSTSEAKLVLFDSICF 347
Query: 540 RIIGCSA 546
IIG SA
Sbjct: 348 EIIGESA 354
>gi|413956551|gb|AFW89200.1| hypothetical protein ZEAMMB73_192507 [Zea mays]
Length = 96
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 3 KTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKL--TGNRYMFNASDGKKRLKAILPSN 60
K+V+P A+S IL++PS S + ++VVQVLDLK G+R+ F A+DG ++KA+LP+
Sbjct: 5 KSVTPGAVSYILAHPSTGSDGAVSDLVVQVLDLKSIGMGSRFSFTATDGNDKIKAMLPTY 64
Query: 61 LSSEVISGNIQNKGLIRLLDYALNEIPTKSEK 92
+SEV SGN++N GLIR+LDY N + ++K
Sbjct: 65 FASEVHSGNLKNFGLIRILDYTCNSVKGNADK 96
>gi|413937763|gb|AFW72314.1| hypothetical protein ZEAMMB73_397324 [Zea mays]
Length = 564
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 185/432 (42%), Gaps = 27/432 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L Y+ + I+V V+ K ++ A +G + +++ L+D G I A + A
Sbjct: 6 LPDLTTYKKHAIIQVHVSRKW---SFHGATEKGPLQHIDMVLSDCKGNSIYAEIPANLAE 62
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + ++Y ISR + A +K + D + + ++ A N P +
Sbjct: 63 EKGALIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTTYTIIKPASNPPPTFPLYIYQL 122
Query: 295 VPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
P DE+ + + T+ +D++G + ++ + + RD+ + D +++T+ ++L
Sbjct: 123 TPFDEIESQIQHKTKFLDVLGTITEITALKIVHIEGQLSPTIIRDVMIEDLSRKTLKITL 182
Query: 354 WNELATNVG-QELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLK 411
W + AT+ Q++ D K PI+A+ + F +G+ LS +P +PEA+
Sbjct: 183 WAKRATSFTIQDVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPTIPEAEA-- 240
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH----ITSNPSLGDEKPVFFSI 467
Y++ G +I L + K+ ++ + +T NP D +
Sbjct: 241 --YQNRRGG---ETIQLHLPTQPKHALQTFQPPTIEHKTLEQLLTMNPY--DYPDTGYEC 293
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
I+ I WY +C C +K T + Y+C+ C+ + + +Y + R D +
Sbjct: 294 TVTITEIDTSNTWWYPSCTKCGRKTTPH-NTAYYCDWCKWDGYK--FKYKLKFRASDATA 350
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
A + F+ A I+G S + + L+S L ++ + RV +NN
Sbjct: 351 MAQMFCFDNIARYIVGKSCEVI--LRST-NAATPIPPDLAQIVSLKFTFRVIPDDSSFNN 407
Query: 588 EKRQRVTVRAVA 599
+ + + +R ++
Sbjct: 408 QDQVPIALRIIS 419
>gi|222629943|gb|EEE62075.1| hypothetical protein OsJ_16859 [Oryza sativa Japonica Group]
Length = 207
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 168 LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
L + + P+ +L+PY+ WTIK RVT+K ++ N RGE F+ +L DE G ++ A
Sbjct: 78 LCIDTSLTPIAALSPYKCKWTIKARVTAKSGLQHLSNDRGEAKFFDFDLLDEQGGEMLAK 137
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE 278
F+ AA KFY ++ KVY ISRG ++ A + F + DYE+ L+ ++ VE
Sbjct: 138 CFSSAAEKFYGLIEVDKVYLISRGLVKPAQEPFNS---DYELALDASASVE 185
>gi|413933977|gb|AFW68528.1| hypothetical protein ZEAMMB73_247337 [Zea mays]
Length = 507
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 187/434 (43%), Gaps = 31/434 (7%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L Y+ + I+V V+ K ++ A G + +++ L+D G I A + A
Sbjct: 12 LPDLTAYKKHAIIQVHVSRKW---SFHGATENGPLQHIDMVLSDCKGNSIYAEIPANLAE 68
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + ++Y ISR + A +K + D + + ++ A N P +
Sbjct: 69 EKGVLIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTTYTIIKPASNPPPTFPLYIYRL 128
Query: 295 VPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
P DE+ + + T+ +D++G + V+ ++ + RD+ + D +++T+ ++L
Sbjct: 129 TPFDEIESQIQHKTKFLDVLGTITEVTALKTVHIQGQLSPTIIRDVMIEDLSRKTLKITL 188
Query: 354 WNELATNVG-QELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLK 411
W + AT+ Q++ D K PI+A+ + F +G+ LS +P +PEA+
Sbjct: 189 WAKRATSFTIQDVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPTIPEAEA-- 246
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH------ITSNPSLGDEKPVFF 465
Y++ G +I L + K+ ++ ++ H +T NP D +
Sbjct: 247 --YQNRRGG---ETIQLHLPTQPKHALQTF--QPPTIEHKTLEQLLTMNPY--DYPDTGY 297
Query: 466 SIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
I+ I WY +C C +K T + Y+C+ C+ + + +Y + R D
Sbjct: 298 ECTVTITKIDTSNTWWYPSCTKCGRKTTPH-NTTYYCDWCKWDGYK--FKYKLKFRASDA 354
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+ A + F+ A I+G S + + L+S L ++ + RV +
Sbjct: 355 TAMAQMFCFDNIARYIVGKSCEVI--LRST-NAATPIPPDLAQIVSLKFTFRVIPDDSSF 411
Query: 586 NNEKRQRVTVRAVA 599
NN+ + + +R ++
Sbjct: 412 NNQDQVPIALRIIS 425
>gi|10177987|dbj|BAB11360.1| replication protein A1-like protein [Arabidopsis thaliana]
Length = 543
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 164/391 (41%), Gaps = 58/391 (14%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L + P++ NW ++V++ R K+A E +V + DE+G+++ T+ KF
Sbjct: 10 LSDVKPFKTNWCVRVKILHL--WRQTKDASRE--TLDVIICDENGSKMHITIRKHYIGKF 65
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA--VNETAFIPQTKFNF 294
+ ++G I TL ++K Y M N N++V + V+++ F+ F
Sbjct: 66 HRSIKVGDWKIIDNFTLSPLTGKYKISSLTYRMAFNHNTDVIKCDPVSDSVFLDLADFEG 125
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
V + V L+DI+G V V I + N+ K + + D + + +LW
Sbjct: 126 VKTESYDENV----LIDILGQVVRVGKVDEIM--AQNKPNKKLEFQIRDASNERLPCTLW 179
Query: 355 NELATNVGQELLD-NADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKLKS 412
A V L D+ +V I+ K+ +F+G S V+++P +PE +
Sbjct: 180 GVFAEKVFSALKSIKHDEKTVVLIRYAKINNFKG--NHAFDVSEVIINPVHVPEVELF-- 235
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF-FSIKAYI 471
+S+ SD ++LT I N D V + I I
Sbjct: 236 -------------------------VKSLPSDGLALT-IQDNYVNRDLIKVGQWRILGSI 269
Query: 472 SLIKPDQAMWYRACKTCNKK---VTDALGSG----------YWCEGCQKNDEECSLRYIM 518
I D +Y C CN+K V ++ +G +WC+ CQ++ RY +
Sbjct: 270 FAIDTDWGWFYFGCPKCNRKTELVKESTSTGKMVKTPMKPKFWCDKCQESITNVEARYKL 329
Query: 519 VARVCDGSGEAWISIFNEEAERIIGCSADEL 549
RV D + E + +F A ++IG S++EL
Sbjct: 330 HVRVMDQTAEIKLMVFENNATKLIGKSSEEL 360
>gi|357473253|ref|XP_003606911.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|357477581|ref|XP_003609076.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|357477673|ref|XP_003609122.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355507966|gb|AES89108.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355510131|gb|AES91273.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355510177|gb|AES91319.1| Replication factor A 51 kDa subunit [Medicago truncatula]
Length = 502
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 170/367 (46%), Gaps = 23/367 (6%)
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM-NLNENSEVEEAVN 282
I AT+ + Q GK+Y IS + +++ V+N+ M + ++ V E +
Sbjct: 75 IHATIPRRFSPSLKKVLQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGS 134
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN-NEMVPKRDITV 341
+ IP+ F FV ++L + L D+IG + +V P I K+ N V + +
Sbjct: 135 DDNTIPRYIFEFVNFNDLIKRCGKEVLADVIGFIIDVDP---IEEKTTVNGKVDMLSLHL 191
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSP---IVAIKSLKVGDFQG---ISLSTLGR 395
D + + V+LW++ A Q+L+D +P + S V +QG + +S+
Sbjct: 192 GDGSGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRS 251
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
+T+ ++ D PE L S+GK + + + + SL +++ S+ +S+ S
Sbjct: 252 TTIYINIDTPEVADL--ILSSKGKNSVLKTTETL--SLTNVDVKTI-SELLSMA--VSGV 304
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
GD V ++ A + I ++Y +C C K V+ + + + CE C K + +R
Sbjct: 305 YQGD---VVYNCVATVDDILLKNGLYYVSCPHCRKTVS-STETDFNCEHCTKKVDYPKIR 360
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELN-ELKSQLGDDNSYQMKLKEVTWVPH 574
Y + +V D + +F E AE++ D+L +L++Q G D+ +L+ + H
Sbjct: 361 YRLELQVNDSTESTIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQHIIGSKH 420
Query: 575 LLRVSVA 581
+ +V ++
Sbjct: 421 IFQVKLS 427
>gi|414877599|tpg|DAA54730.1| TPA: hypothetical protein ZEAMMB73_628014 [Zea mays]
Length = 495
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 26/382 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ L+P N I+VRV K R N G N+ L DE GT I A + A
Sbjct: 9 MTELHPQSTNVVIRVRVIRKWEFRGATN-DGPLQHINLVLADEQGTSIHAEIAAALAVDK 67
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
++ KVY + R + + FK V N++ + ++ + + P+ +
Sbjct: 68 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYIYKLTS 127
Query: 297 IDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
+ + + N T L+D++G++ + P I NN + RDI + + + ++ ++LW
Sbjct: 128 FENIEDNIDNRTYLIDVLGMLTQIDPPHLI--GYNNSTI-IRDIYIKNASDMSLKITLWG 184
Query: 356 ELATNVG-QELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKS 412
A+N ++ + + PIV + F+G LS S+ +P +PEA+
Sbjct: 185 NQASNFSISDVYNQSSNQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGIPEAQT--- 241
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY-- 470
Y + + + I + AK + S +L H T L D P F + Y
Sbjct: 242 -YYNRLQNNDLQLIQP---TAAKEEIQ--VSQPPNLEHKTVE-ELLDIDPDMFPPEGYRC 294
Query: 471 ---ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
IS I + WY +C C+K + +GY C C D + RY + DG+
Sbjct: 295 TVTISRIVQNSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRYKLSFIATDGTC 351
Query: 528 EAWISIFNEEAERIIGCSADEL 549
EA F+ A +I+G D L
Sbjct: 352 EAEFFCFDSIARKIVGKPCDNL 373
>gi|340387334|ref|XP_003392162.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Amphimedon queenslandica]
Length = 91
Score = 88.6 bits (218), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
WTIK RVTSK +R Y N+RGEG + +E D G +I+AT FNE A +F+ ++ KVY
Sbjct: 1 WTIKARVTSKPPLRHYNNSRGEGRILTLEFVDHSG-EIRATAFNEDADRFFPNVEVNKVY 59
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
Y+SRG ++ ANK + NDYE+ L + +EE
Sbjct: 60 YVSRGRIKPANKIY-YANNDYELTLGAETTIEE 91
>gi|302825524|ref|XP_002994373.1| hypothetical protein SELMODRAFT_4831 [Selaginella moellendorffii]
gi|300137728|gb|EFJ04565.1| hypothetical protein SELMODRAFT_4831 [Selaginella moellendorffii]
Length = 224
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + W+++ RVT KG + ++ GCV +V++ D + ++I+ F E A++
Sbjct: 2 PIKDINDHCYRWSLRARVTHKGKLVFFETGTA-GCVMSVDVADAESSEIRIVGFGENAKR 60
Query: 236 FYDRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ G VY S + ++ + + ++++E+ ++ E++ V + IP
Sbjct: 61 LSSEIEQGSVYIFSGNSGVQRSKPAYTPYKSNWEIKASKTMEIKR-VEDDLRIPNVFLKR 119
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ + + T VD+IG V + T +I K + + +R + ++DE+ ++ + LW
Sbjct: 120 TSVLDASKLSQET-FVDVIGGVMWIGQT-NISPKDSGAFMRRRMLCLSDESSHSIDMCLW 177
Query: 355 NELATNVGQELLDNADKS--PIVAIKSLKVGDFQGISLSTLGRSTVL 399
+ A + G E+ D + PIV +K ++ D+ G S+S G ST+L
Sbjct: 178 DSKAEDEGSEIEDKLGRGERPIVCVKGGRISDYNGKSISVTGGSTLL 224
>gi|414877600|tpg|DAA54731.1| TPA: hypothetical protein ZEAMMB73_628014, partial [Zea mays]
Length = 489
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 26/382 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ L+P N I+VRV K R N G N+ L DE GT I A + A
Sbjct: 9 MTELHPQSTNVVIRVRVIRKWEFRGATN-DGPLQHINLVLADEQGTSIHAEIAAALAVDK 67
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
++ KVY + R + + FK V N++ + ++ + + P+ +
Sbjct: 68 GSLIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQMFPRYIYKLTS 127
Query: 297 IDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
+ + + N T L+D++G++ + P I NN + RDI + + + ++ ++LW
Sbjct: 128 FENIEDNIDNRTYLIDVLGMLTQIDPPHLI--GYNNSTI-IRDIYIKNASDMSLKITLWG 184
Query: 356 ELATNVG-QELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKS 412
A+N ++ + + PIV + F+G LS S+ +P +PEA+
Sbjct: 185 NQASNFSISDVYNQSSNQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGIPEAQT--- 241
Query: 413 WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY-- 470
Y + + + I + AK + S +L H T L D P F + Y
Sbjct: 242 -YYNRLQNNDLQLIQP---TAAKEEIQ--VSQPPNLEHKTVE-ELLDIDPDMFPPEGYRC 294
Query: 471 ---ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
IS I + WY +C C+K + +GY C C D + RY + DG+
Sbjct: 295 TVTISRIVQNSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRYKLSFIATDGTC 351
Query: 528 EAWISIFNEEAERIIGCSADEL 549
EA F+ A +I+G D L
Sbjct: 352 EAEFFCFDSIARKIVGKPCDNL 373
>gi|413917541|gb|AFW57473.1| retrotransposon protein [Zea mays]
Length = 581
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 162/388 (41%), Gaps = 24/388 (6%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
+T P+ L+P N I+VRV K R N G N+ L DE GT I A +
Sbjct: 42 VTMLFTPVAELHPQSTNVVIRVRVIRKWEFRGATN-DGPLQHINLVLADEQGTPIHAEIA 100
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
A ++ KVY + R + + FK V N++ + ++ + + P+
Sbjct: 101 AALAVDKGSIIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPR 160
Query: 290 TKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ + + + N T L+D++G++ ++P + NN + RDI + + + +
Sbjct: 161 YIYKLTCFENIEDSIDNRTYLIDVLGMLTQINPPHPV--GYNNSTI-IRDIFIKNTSDMS 217
Query: 349 VTVSLWNELATNVG-QELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLP 405
+ ++LW A++ ++ + ++K PIV + F+G LS+ S+ +P +P
Sbjct: 218 LKITLWGNQASSFSISDVYNQSNKQPIVILLVGFLAKRFKGQPYLSSTAASSWYFNPVIP 277
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF- 464
EA+ Y + + + I + S +L T L + +F
Sbjct: 278 EAQT----YYNRLQNNDLQLIQPTAAE-----EEILLSQPPNLEQKTVEELLNIDPDMFP 328
Query: 465 ---FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
+ IS I + WY +C C+K + +GY C C D + RY +
Sbjct: 329 PEGYRCTVTISRIVQNSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRYKLSFI 385
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADEL 549
DG+ EA F+ A +I+G D L
Sbjct: 386 ATDGTCEAEFFCFDNIARKIVGKPCDNL 413
>gi|62733633|gb|AAX95750.1| Eukaryotic protein of unknown function (DUF889), putative [Oryza
sativa Japonica Group]
gi|110288790|gb|ABG65978.1| hypothetical protein LOC_Os10g12174 [Oryza sativa Japonica Group]
Length = 1806
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 213 NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLN 272
++ L DE G I A +F + F GKVYY+ ++ +NK ++ V N M
Sbjct: 1355 DLVLVDEKGGSIHAQIFPPLIQVFKPLLAEGKVYYLDSYRVKTSNKSYRPVANPLMMTFT 1414
Query: 273 ENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNN 331
+ + VE+ ++ P ++ P++E+ +V+ E VD+IG + +S +R KS +
Sbjct: 1415 KWTSVEQCLDVPFNFPTVVYSLTPLNEVSNFVDKNESFVDVIGFITEISTPTMLRPKSRD 1474
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGIS 389
KR + + D T+ VSLW E A E + A +S IV ++ GI
Sbjct: 1475 VSSLKRTVQICDTNNSTLNVSLWAEQALAFDAESIHKAGQSEPQIVLFVGTLAKNYPGIG 1534
Query: 390 LSTLGRSTV--LVSPDLPEAKKLK 411
L+ G S ++ D+PE LK
Sbjct: 1535 LALSGGSACKWYINIDVPEMVDLK 1558
>gi|357516559|ref|XP_003628568.1| Replication factor A protein [Medicago truncatula]
gi|355522590|gb|AET03044.1| Replication factor A protein [Medicago truncatula]
Length = 559
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 163/373 (43%), Gaps = 49/373 (13%)
Query: 182 PYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQ 241
P + NW I+VRV + T+ + + L D+ G +IQA + + F R +
Sbjct: 13 PGRLNWRIRVRVVRMWEVPTFLKPN-QANSLEMVLLDQMGVKIQAIVRKQLIYVFQKRLR 71
Query: 242 LGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELG 301
G+VY IS ++ + ++ + Y++ ++V+ + T IP +F I ++
Sbjct: 72 EGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSAT--IPLYGLSFTSIVDVS 129
Query: 302 RY-VNGTELVDIIGVVQNVSPTMS-IRRKSNNEMVPKRDITVADETKRTVT------VSL 353
+ V LVD++G+V VS +R S +M+ V D + + V+L
Sbjct: 130 NHTVEYDYLVDVMGLVTAVSEEREYVRDGSVTKMII---FEVTDHSGKIECALFGEYVAL 186
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
WN + G E DK+ + +K G + ++V+PD+PE K
Sbjct: 187 WNGFVSK-GFE-----DKATLQNVK---------------GTTRLIVNPDVPEVIAFKD- 224
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARS----MYSDRVSLTHITSNPSLGDEKPVFFSIKA 469
G G + + LG +K MY + T + E+ FF + A
Sbjct: 225 -RLIGLGIQVPPTLTVLGGPSKPSMEEEFLRMYPKK------TISQLFNSEEDGFFVVSA 277
Query: 470 YISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
+S + WY ACK C++ VT G+ Y+C+GC K+ + RY + RV DG+G++
Sbjct: 278 IVSGFVEGEEWWYPACK-CHRSVTADSGA-YYCKGCDKHVIQMVPRYKIKLRVDDGTGDS 335
Query: 530 WISIFNEEAERII 542
+F+ + ++
Sbjct: 336 VFVLFDSDVHYLL 348
>gi|115440927|ref|NP_001044743.1| Os01g0838100 [Oryza sativa Japonica Group]
gi|56784643|dbj|BAD81690.1| helicase-like protein [Oryza sativa Japonica Group]
gi|113534274|dbj|BAF06657.1| Os01g0838100 [Oryza sativa Japonica Group]
Length = 474
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 159/404 (39%), Gaps = 45/404 (11%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAAR 234
L ++P W I+ ++ M Y + +V+L DE G + A + A
Sbjct: 45 LCDISPASRGWKIRAKI---ARMWDYTGTADDLPPIHVDLVLIDEKGNAMYAEIPGVEAD 101
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
KF Q KVY S+ + + +K N Y + L + VE+ A P FN
Sbjct: 102 KFRPLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNL 161
Query: 295 VPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
V L V E D+IG++ VS +R S PKR I + D V + L
Sbjct: 162 VQFSYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVL 221
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL---------VSPDL 404
W E A + +AD V + VG F + L ++ D+
Sbjct: 222 WGEHAPDF------DADAVHSVGQDNAVVGIFVDTLMKAYNNEETLSGGSACKWYLNEDI 275
Query: 405 PEAKKLKSWYESEG-KGTSMASIGSGLGSL--AKNGARSMYSDRVSLTHITSNPSLGDEK 461
PE + +++S G + I +G S ++ AR + L I + G
Sbjct: 276 PE---INQFFDSLGDSAPKIQWISTGAESFGSSQRPARLEHKSVADLKKIDPWEAAGAG- 331
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC-EGCQKNDEECSLRYIMVA 520
FS I+ + P Q+ W+ +C C++ T A GS Y C GC S+ I
Sbjct: 332 ---FSCTVTIAKLSPSQSWWFSSCSRCHRAAT-AYGSSYKCSSGCS------SVTAIPKY 381
Query: 521 RVC----DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDN 560
R+C DG+ A +F A++++G +N +K Q DN
Sbjct: 382 RLCLIGTDGTNSAEFVLFGRVAQQVVG--RPVMNLIKFQGRSDN 423
>gi|357484727|ref|XP_003612651.1| Replication factor A protein [Medicago truncatula]
gi|355513986|gb|AES95609.1| Replication factor A protein [Medicago truncatula]
Length = 477
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 170/367 (46%), Gaps = 23/367 (6%)
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM-NLNENSEVEEAVN 282
I AT+ + Q GK+Y IS + +++ V+N+ M + ++ V E +
Sbjct: 43 IHATIPRRFSPSLKKVLQEGKIYVISHYEVSKNKEKYAVVENNPSMLSFYGDAIVTEEGS 102
Query: 283 ETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN-NEMVPKRDITV 341
+ IP+ F FV ++L + L D+IG + +V P I K+ N V + +
Sbjct: 103 DDNTIPRYIFEFVNFNDLIKRCGKEVLADVIGFIIDVDP---IEEKTTVNGKVDMLSLHL 159
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSP---IVAIKSLKVGDFQG---ISLSTLGR 395
D + + V+LW++ A Q+L+D +P + S V +QG + +S+
Sbjct: 160 GDGSGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRS 219
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
+T+ ++ D PE L S+G+ + + + + SL +++ S+ +S+ S
Sbjct: 220 TTIYINIDTPEVADL--ILSSKGENSVLKTTETL--SLTNVDVKTI-SELLSMA--VSGV 272
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
GD V ++ A + I ++Y +C C K V+ + + + CE C K + +R
Sbjct: 273 YQGD---VVYNCVATVDDILLKNGLYYVSCPHCRKTVS-STETDFNCEHCTKKVDYPKIR 328
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELN-ELKSQLGDDNSYQMKLKEVTWVPH 574
Y + +V D + +F E AE++ D+L +L++Q G D+ +L+ + H
Sbjct: 329 YRLELQVNDSTESTIFVLFAEVAEQLAQLKLDDLTPDLENQTGRDSDLPKQLQHIIGSKH 388
Query: 575 LLRVSVA 581
+ +V ++
Sbjct: 389 IFQVKLS 395
>gi|149676198|dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 196/428 (45%), Gaps = 44/428 (10%)
Query: 180 LNPYQGNWTIKVRVTSKGNM---RTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
++P IKVR+ + R + + + C+F+ D++GT + + E K+
Sbjct: 11 ISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFH----DKEGTVLHVNIPKEFVEKY 66
Query: 237 YDRFQLGKVYYISRGTLRVAN-KQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
++G+VY I R L ++N +KT + Y + + V E + + F P F
Sbjct: 67 SAMLKIGQVYSI-RNFLVISNFYTYKTSPHKYMLKFYYKTVVRE-LKDIVF-PSHMFRLQ 123
Query: 296 PIDELGRYV--NGTELVDIIGVVQNV-SPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
P+ +L + + N EL+D+IG+V + +P + ++ D + D + +
Sbjct: 124 PLSQLKQKIDINEKELIDLIGMVVEINTPQDKVIAGKATRLI---DFLLEDTEGTQIKCT 180
Query: 353 LWNELATNVGQELLDNADKSPIVAIKS-------LKVGDFQGISLSTLGRSTVLVSPDLP 405
+W++ + + + + + P++ + L GD + S+ + + V+ D P
Sbjct: 181 VWDDHVSKL-EPFYQSTKQDPVIILLQFCRVKVDLSTGDIK--VCSSFDVTQIWVNSDFP 237
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS----DRVSLTHITSNPSLGDEK 461
E ++ + +G+ T M SI S + +++ A +S + +++ I GD
Sbjct: 238 EFQEFRD--RLKGEQTPMRSIVS-MSNMSYGSAFEDFSSGQMNVFTISEIYQKKEYGD-- 292
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
F + A I I+ +Y +CK+ CNKK+T + Y C+ C++ +E LRY +
Sbjct: 293 ---FWVAAKIVGIESSWDWFYVSCKSHGCNKKLT-LRNTLYDCDKCKRTWQEGILRYRVK 348
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
R D G A ++++E ++G SA +L + L +++ + + L R++
Sbjct: 349 VRAVDLDGNAPFILWDKECTELLGISATDLRQ--KILEGPLRIPREIESLVGLAMLFRIA 406
Query: 580 VAQQEYNN 587
V +++++N
Sbjct: 407 VRKEQFDN 414
>gi|284434672|gb|ADB85379.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 305
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 133/296 (44%), Gaps = 19/296 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTS----KGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
L +NP +WT+ RV+ +GN+ E ++ L DE G I A + E
Sbjct: 6 LSEINPTSKHWTVCARVSRLWEYRGNVDD-----AEIQHLDLVLVDEQGNAIYAEIPKEH 60
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
Q +Y R + +++ V +DY + + +E+EE + P +
Sbjct: 61 VEAKRVLLQEEHIYTFRRFLVSPNKGKYRPVDSDYMIEIGYYTEIEELFDAAPTFPMYAY 120
Query: 293 NFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
P++ L Y+ T +D+IGVV+ VS SI+ + + KR + + D TV
Sbjct: 121 TLTPLENLDSYIGETRNFLDVIGVVKAVSNAASIQGSNQSSTTTKRLVVIKDAKDCETTV 180
Query: 352 SLWNELATNV-GQELLDNADKSPI----VAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
+LW + A + G+ + + K+P+ V I + G +G+S + R +SP++PE
Sbjct: 181 TLWGQRAKDFDGEYVYEKEQKNPVPALFVGILMKRYGQNEGLSGGSACR--WYISPNIPE 238
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKP 462
A + S ++ TS A L +A +++ + +LT ++ + D+KP
Sbjct: 239 AAAITSSLQTTHGATSSAQ--KRLFDVAAASDQNLSTQTTNLTEEHASHDVTDDKP 292
>gi|302824934|ref|XP_002994105.1| hypothetical protein SELMODRAFT_4757 [Selaginella moellendorffii]
gi|300138043|gb|EFJ04826.1| hypothetical protein SELMODRAFT_4757 [Selaginella moellendorffii]
Length = 232
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SL W+ K RVT K +R + R G VFN + D ++I+ + E AR
Sbjct: 1 IASLTNRSYKWSFKARVTHKDTLRQFTTKR-TGWVFNFYVADSASSEIRIVSYGETARAL 59
Query: 237 YDRFQLGKVYYISRGT--LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
++ G +Y S GT LR A++ + +E+ ++ E+ ++ IP+ +
Sbjct: 60 SEKVIQGAIYIFS-GTCGLRSASELYTPFPATWEILADKKMEIMPTADDEC-IPRIVLHR 117
Query: 295 VPIDELGRYVNGTELVDIIGVVQNVSPTMSIRR--KSNNEMVPKRDITVADETKRTVTVS 352
I E+ + +D++GVV V T R +S+N+ +R +T+ D + +V V
Sbjct: 118 KCIAEILD-ITINSYIDLVGVVIWVGLTTVTPRGVESSNK---RRMMTICDNSFHSVDVC 173
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW + A G +LL+N IV IK ++ +F S+S ST+ + DL ++++S
Sbjct: 174 LWGDYADEEGSQLLENI---SIVCIKGGRICEFNERSVSVTNVSTLAIDADLDLVQEMRS 230
Query: 413 WY 414
WY
Sbjct: 231 WY 232
>gi|413943366|gb|AFW76015.1| hypothetical protein ZEAMMB73_328795 [Zea mays]
Length = 378
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 143/315 (45%), Gaps = 27/315 (8%)
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
++Y ISR + A +K + D + + ++ A N P + P DE+
Sbjct: 41 QIYDISRFRVTAAKTTYKPIDGDKMIQFTTYTIIKPASNPPPTFPLYIYQLTPFDEIESQ 100
Query: 304 V-NGTELVDIIGVVQNVSP--TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN 360
+ + T+ +D++G + V+ T+ I+ + N ++ RD+ + D +++T+ ++LW + AT+
Sbjct: 101 IQHKTKFLDVLGTITEVTALKTVHIQGQLNPTII--RDVMIEDLSRKTLKITLWAKRATS 158
Query: 361 VG-QELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
Q++ D K PI+A+ + F +G+ LS +P +PEA+ Y++
Sbjct: 159 FTIQDVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPTIPEAEA----YQNRR 214
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTH------ITSNPSLGDEKPVFFSIKAYIS 472
G +I L + K+ ++ ++ H +T NP D + A I+
Sbjct: 215 GG---ETIQLHLPTQPKHALQTF--QPPTIEHKTLEQLLTMNPY--DYPDTGYECTATIT 267
Query: 473 LIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
I WY +C C +K T Y+C+ C+ + + +Y + R D + A +
Sbjct: 268 EIDTSNTWWYPSCTKCGRKTTPH-NIAYYCDWCKWDGYK--FKYKLKFRASDATAMAQMF 324
Query: 533 IFNEEAERIIGCSAD 547
F+ A I+G S +
Sbjct: 325 CFDNIARYIVGKSCE 339
>gi|302820843|ref|XP_002992087.1| hypothetical protein SELMODRAFT_430315 [Selaginella moellendorffii]
gi|300140119|gb|EFJ06847.1| hypothetical protein SELMODRAFT_430315 [Selaginella moellendorffii]
Length = 306
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYIS-RGTLRVANKQFKTVQNDYEMN 270
+ ++ D GT+I+ ++ A D+ G VY S G +R +N+ + + +E+
Sbjct: 1 MSFDVVDVQGTEIRIIGSDDCALVLSDKIVQGTVYSFSGSGGIRRSNQAYTPFEVTWEIQ 60
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN 330
N+ V A++E A P+ I + + VD++G+V + T+++ + +
Sbjct: 61 ANKGM-VFTALDEDATFPRIVLAKTSILSACQKERDS-FVDVVGIVIWIG-TITVTSRDS 117
Query: 331 NEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDFQGI 388
V KR + + D++ +V + LW+ A G + + D PI+ +K KV D+ G
Sbjct: 118 GTFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQERIDSGVQPIICVKGGKVSDYNGK 177
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL 448
SLS +G ST+L+ P++ L+ W T+ L+ + +R S +L
Sbjct: 178 SLSAIGVSTILIEPEMEAVADLREWMTLYYNVTNFI-------HLSTSSSRQTVSCTTTL 230
Query: 449 THITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSGYWC 502
+ I++ E + + A + +K D+ +Y AC + C KK T G++C
Sbjct: 231 SEISNMQLKVLESSPIYRVIATVKEMKTDE-FYYNACINVVNARQCGKKTTRT-ADGWFC 288
Query: 503 EGC 505
C
Sbjct: 289 NYC 291
>gi|413956258|gb|AFW88907.1| hypothetical protein ZEAMMB73_503872 [Zea mays]
Length = 553
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 171/417 (41%), Gaps = 35/417 (8%)
Query: 143 KQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY 202
++ A SA Q Q G+ P V L L+P N I+VRV K R
Sbjct: 9 RKRSTAISAQQAPTLQCGHFDP-------EFVKTLKELHPQSTNVVIRVRVIRKWEFRGA 61
Query: 203 KNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKT 262
N G N+ L DE GT I A + A ++ KVY + R + + FK
Sbjct: 62 TN-DGPLQYINLVLADEQGTPIHAEIAAALAVDKGSLIEIEKVYELKRFRVTPSRNYFKP 120
Query: 263 VQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV-NGTELVDIIGVVQNVSP 321
V N++ + ++ + + P+ + + + + N T L+D++G++ ++P
Sbjct: 121 VDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTCFENIEDNIDNRTYLIDVLGMLTQINP 180
Query: 322 TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG-QELLDNADKSPIVAIK-S 379
I NN + RDI + + + ++ ++LW A++ ++ + ++ PIV +
Sbjct: 181 PHLI--GYNNSTI-IRDIFIENTSDMSLKITLWGNQASSFSISDVYNQSNNQPIVILLVG 237
Query: 380 LKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGA 438
F+G LS+ S+ +P +PEA+ + ++ + L + A
Sbjct: 238 FLAKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNRLQT-----------NDLQLIQPTAA 286
Query: 439 RS--MYSDRVSLTHITSNPSLGDEKPVF----FSIKAYISLIKPDQAMWYRACKTCNKKV 492
+ S +L T L + +F + IS I + WY +C C+K
Sbjct: 287 EEEILLSQPPNLEQKTVEELLNIDPDMFPPEGYRCTVTISRIVQNSKWWYPSCSRCHKSS 346
Query: 493 TDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
+ +GY C C D + RY + DG+ EA F+ A +I+G D L
Sbjct: 347 SQT-STGYHCTSCGCTD--INFRYKLSFIATDGTCEAEFFCFDSIARKIVGKPCDNL 400
>gi|301632434|ref|XP_002945290.1| PREDICTED: hypothetical protein LOC100497369, partial [Xenopus
(Silurana) tropicalis]
Length = 1160
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
M N + V +++A +P +F FVPI EL N ++DIIG+ +N + +
Sbjct: 1 MTFNSETSVIPC-DDSADVPMVQFEFVPIGEL-ESKNKDTVLDIIGICKNAEEVTKVTIR 58
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
SNN V KR+I + D + + V+ +LW E A + + P+VAIK ++ DF G
Sbjct: 59 SNNREVSKRNINLMDSSGKVVSTTLWGEDADKF------DGSRQPVVAIKGARLSDFGGR 112
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
SLS L STV+++PD+PEA KL++W + E
Sbjct: 113 SLSVLSSSTVMINPDIPEAFKLRAWLDRE 141
>gi|50838977|gb|AAT81738.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108708958|gb|ABF96753.1| hypothetical protein LOC_Os03g31560 [Oryza sativa Japonica Group]
Length = 1500
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 18/277 (6%)
Query: 142 PKQEMVAKSAAQILRDQNGNMAPA-ARLAMTRRVHPLVS-LNPYQGNWTIKVRVTSKGNM 199
P ++ K A ++ QN N + ++ H L+S L+ N I RV+ N
Sbjct: 947 PTHRLILKEAVVVMLLQNLNQSIGLCNSSIFHMAHVLISQLSFGDSNKRILARVSRLWNF 1006
Query: 200 RTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVAN 257
N +F+ +L DE GT I A ++ K + KVYYI T+R AN
Sbjct: 1007 TDLNNHTK---IFHTDLVLLDEMGTSIHAQIYPPITEKMKPLLKEEKVYYIDSFTVRAAN 1063
Query: 258 KQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQ 317
+ ++ V N+ + ++ + +EE +N P F+ P +++ V ++G V
Sbjct: 1064 RTYRPVANNLMILFSKWTTLEEHINVPPHFPGITFSLTPFEDVPSLVEKNSFY-VVGAVT 1122
Query: 318 NVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIV 375
+IR KS N KR + + D + T+ V+LW E AT+ + NA ++ +V
Sbjct: 1123 ------TIRPKSRNAESLKRTLQIRDASNSTLPVTLWGERATSFDANDIYNAGQTQAQVV 1176
Query: 376 AIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKL 410
V D++G+ L+ G S ++ ++PE +L
Sbjct: 1177 VFVGTLVKDYRGLGLTLTGSSPCKWYINLNIPEVAEL 1213
>gi|388499736|gb|AFK37934.1| unknown [Lotus japonicus]
Length = 406
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 32/395 (8%)
Query: 168 LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQ 225
+A + + P+V+L P NW IKVRV + GE ++EL D+ G +IQ
Sbjct: 1 MASSVAIDPVVTLCPPNHNWRIKVRVV---RLWIADGFAGENKPASMELILLDQHGGKIQ 57
Query: 226 ATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETA 285
AT+ RK+ ++F G VY I+ L ++ + + + N +++ A E++
Sbjct: 58 ATVRKLMFRKWGEQFVEGNVYIITFFHLIPNLGAYRPTDHAFRILFNPKTKIIPA--ESS 115
Query: 286 FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
IP+ F+ + ++L D + + T R +++V K + +
Sbjct: 116 IIPRWGFSLK---------DSSQLNDDGFQTEYLVATSEERTYVKDDIVTKMMLLEISDD 166
Query: 346 KRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG--ISLSTLGRSTVLVSPD 403
K + +L+ E V L N + P+V ++ K+ F+G + + + S ++ +P+
Sbjct: 167 KGKLECALFGEYVQIVLDYLSSNPLEKPVVVLQLAKLKSFRGKNVLQNVMKASRIIFNPE 226
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD--EK 461
+ EA+ L G +M ++ N + ++ D ++ + +L + E
Sbjct: 227 VAEAESLMD----RISGLNMQPNQPVGHIISPNPSVPIFEDFMNNYPKKTICALNETTED 282
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVT--DALGSGYWCEGCQKNDEECSLRYIMV 519
+F + L++ D WY ACK C+K VT D L Y+C GC K+ S RY +
Sbjct: 283 GLFIVYGTVVGLLQ-DDLWWYFACK-CHKAVTFDDGL---YFCPGCCKHVMNVSARYKIK 337
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSA-DELNELK 553
V DG+ +F+ +A +I S D L LK
Sbjct: 338 LEVFDGTDSGNFLLFDSDAHHLIKKSCKDMLGNLK 372
>gi|115437564|ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa Japonica Group]
Length = 1932
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 156/376 (41%), Gaps = 30/376 (7%)
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQL 242
GN T+ VRV+ + Y + EG + ++ L E G I A ++ +KF
Sbjct: 1183 GNPTLLVRVS---RLWEYHDQDDEGDLRHIGLVLVGEKGYAIAAMIYPPWGKKFKPLISE 1239
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
GKVY ++ ++ K ++ V N +N + +EE V+ A + P EL
Sbjct: 1240 GKVYLLTYYRVKPCTKHYRPVDNKMMINFTRWTGIEEYVDVQAGFGHYAYTLTPYQELRS 1299
Query: 303 YVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
V+ + D+IGV+ ++S ++R + + KR++ + + T + LW E AT+
Sbjct: 1300 RVDRKDSFTDVIGVITDISSVTTVRTRVRDSDSLKRNVYMRNAENETTNIVLWGERATSF 1359
Query: 362 -GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES---- 416
E+L + P + I F G + G S VL++ D + S
Sbjct: 1360 PADEILSAGKEKPQIVI-------FVGTLVRGHG-SVVLIAWDTVVIGNVSLSGNSACKC 1411
Query: 417 -EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIK 475
EG ++ I + +N ++ ++ I +P K FS+ I +
Sbjct: 1412 VEGNYEAIKWIDLPAAPILQNNC-----EQKTIAEI-RDPHPFKFKKHEFSVTVVIKKLN 1465
Query: 476 PDQAMWYRACKTCNKKVTDALGSGYWC--EGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
+ + WY AC C KK G+ Y C C S R+ + D +G+ I
Sbjct: 1466 MEYSWWYTACDIC-KKTAKPYGNLYRCGNSTCPPTG-SASPRFKLSVIAGDDTGDTTFII 1523
Query: 534 FNEEAERIIGCSADEL 549
F A+R+IG S + L
Sbjct: 1524 FGHLAQRLIGRSVEAL 1539
>gi|302755672|ref|XP_002961260.1| hypothetical protein SELMODRAFT_403000 [Selaginella moellendorffii]
gi|300172199|gb|EFJ38799.1| hypothetical protein SELMODRAFT_403000 [Selaginella moellendorffii]
Length = 326
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS--PIVAIKSLKVGDF 385
+ + V KR + + D++ +V + LW+ A G + + D PI+ +K KV D+
Sbjct: 51 RDSGTFVKKRTLCLGDDSGHSVDLCLWDLKAEEEGSYIQEQIDSGVQPIICVKGGKVSDY 110
Query: 386 QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
G SLS +G ST+L+ P++ L+ W ++ + L+ + +R S
Sbjct: 111 NGKSLSAIGVSTILIEPEMEAVADLREW-------MTLYYNVTNFIHLSTSSSRQTVSCT 163
Query: 446 VSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNKKVTDALGSG 499
+L+ I++ E + + A + +K D+ +Y AC + C KK T G
Sbjct: 164 TTLSEISNMQLKVLESSPIYRVIATVKEMKTDE-FYYNACINVVNARQCGKKTTRT-ADG 221
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
+ C C +Y + + D S W F E A+ I+G S EL ++ +
Sbjct: 222 WLCNYCNFESANMEFKYALKMCIEDSSSHVWAIAFQEAAQEIVGMSTKELATMRDE 277
>gi|440301626|gb|ELP94012.1| replication factor A 1, rfa1, putative [Entamoeba invadens IP1]
Length = 460
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 38/335 (11%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
++ P L Q TIK RV SK + Y +G +FN L D++G +++AT FN+
Sbjct: 146 KITPFAMLTAMQNKSTIKGRVISKQDKFKY----AKGNLFNFVLQDKEGGELRATAFNDM 201
Query: 233 ARKFYDRFQLGKVYYISRGTLRV-ANKQFKTVQN-DYEMNLNENSEVEEAVNETAFIPQT 290
YD Q+G YYIS+G +V NK +++ + D +M + + V++A +E +P
Sbjct: 202 CDALYDTIQVGSTYYISKGEFKVPTNKNYRSAKMIDVDMVVGRYTTVQKAEDE---LPAI 258
Query: 291 KFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
D L V+ L DI GV+ V ++ N+++ +R I VAD+TK V+
Sbjct: 259 SSITAISDLLTSPVDS--LYDICGVLVQVKDEDHLK---NDKI--RRSILVADQTKHVVS 311
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS-------------- 396
++ W E A + + + + +++ +F+ +++ RS
Sbjct: 312 INFWGEDAA-----IPERLEPLKTYVFRQVQLREFRTRNMNYSSRSSSIIEGEQIAKYDE 366
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
T LV L E+K Y + + + + + G ++ S L+ +
Sbjct: 367 TSLVHKMLDESKTSTGEYVFDRP--TFIYLDETTTADSVQGTKTEQSKLFKLSKF-NEAV 423
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKK 491
L E+ + ++ AY + K D +Y +C +C +K
Sbjct: 424 LASEEDIKGNVYAYFTSFKTDSTFYYVSCPSCKRK 458
>gi|62733874|gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa Japonica Group]
gi|77549546|gb|ABA92343.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 2157
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 143/367 (38%), Gaps = 48/367 (13%)
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ + G G +F+ +L D+ G I A ++ A + KVYYI T+
Sbjct: 1606 FCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTV------ 1659
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV--------D 311
++ + EE + A P F+ P ++ V+ T D
Sbjct: 1660 ------------SKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYVGLYGMQPD 1707
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++GV+ V +R KS N KR I + D + T+ V+LW E A + NA +
Sbjct: 1708 VMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERADAFDANSVYNAGQ 1767
Query: 372 SP---IVAIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTSMASI 426
+ IV + +L V D+ G+ L+ G S ++ D+PE +LK + + + S
Sbjct: 1768 TQAQVIVFVGTL-VKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRPVSWVD- 1825
Query: 427 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRA 484
N A D I +L K F + + I + + WY +
Sbjct: 1826 ---------NPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVTVRRICSENSWWYNS 1876
Query: 485 CKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
C+ C + + GS Y C C N RY +V D S A +F A R+I
Sbjct: 1877 CRLC-YRTSKPYGSSYKCSSCS-NIGIPDPRYKVVLIAGDASSNATFILFGRVAHRLIKK 1934
Query: 545 SADELNE 551
S + L E
Sbjct: 1935 SVESLIE 1941
>gi|108864598|gb|ABA94881.2| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 2157
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 143/367 (38%), Gaps = 48/367 (13%)
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ + G G +F+ +L D+ G I A ++ A + KVYYI T+
Sbjct: 1606 FCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTV------ 1659
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV--------D 311
++ + EE + A P F+ P ++ V+ T D
Sbjct: 1660 ------------SKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYVGLYGMQPD 1707
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
++GV+ V +R KS N KR I + D + T+ V+LW E A + NA +
Sbjct: 1708 VMGVITEVGSPTVVRPKSRNADSLKRTIQICDASNSTMPVTLWGERADAFDANSVYNAGQ 1767
Query: 372 SP---IVAIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTSMASI 426
+ IV + +L V D+ G+ L+ G S ++ D+PE +LK + + + S
Sbjct: 1768 TQAQVIVFVGTL-VKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRPISWVD- 1825
Query: 427 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRA 484
N A D I +L K F + + I + + WY +
Sbjct: 1826 ---------NPATGYNQDTAEEKTIQEILALNPHKNRSTRFIVNVTVRRICSENSWWYNS 1876
Query: 485 CKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
C+ C + + GS Y C C N RY +V D S A +F A R+I
Sbjct: 1877 CRLC-YRTSKPYGSSYKCSSCS-NIGIPDPRYKVVLIAGDASSNATFILFGRVAHRLIKK 1934
Query: 545 SADELNE 551
S + L E
Sbjct: 1935 SVESLIE 1941
>gi|391329407|ref|XP_003739166.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 291
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
RV SK NM+ +K EG +F+ + D G+ IQ + ++ +G Y ++
Sbjct: 48 RVVSKSNMKNWKKNNQEGKLFSFVIEDSSGS-IQVVTSGDRCDALHEEITVGDCYRLNAF 106
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
TL +N + ++ E+++ + S+V++ + +P++K N + I E+ T L+D
Sbjct: 107 TLHESNPLYNKTKHPLEIHITKLSQVKKIQGKN--LPRSKINNITIAEIMNTELNT-LID 163
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
IIG+V V ++ + + M K++I + D T R V + +WN G E
Sbjct: 164 IIGIVYEVGHPQNLSCR-DGVMRIKQNIRLVDNTLRVVNLGVWNNAQNFAGTE------- 215
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVS-PDLPEAKKLKSWYESEGK 419
VAI +L V ++ G + T ST+L S P+ P+ K L++W+ +G+
Sbjct: 216 GKCVAITNLLVREYAGKKVLTTTDSTILKSEPNDPDLKTLEAWFTRDGQ 264
>gi|357450467|ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355484558|gb|AES65761.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 549
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 171/382 (44%), Gaps = 26/382 (6%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQAT 227
M ++ + ++P + NW I+VRV +R K + +++E L D G +I A+
Sbjct: 1 MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKK---DQLPYSLEMVLMDNKGDRINAS 57
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANK--QFKTVQNDYEMNLNENSEVEEAVNETA 285
+ K+ + +V+ I G VA+ ++T ++ Y++N +++++ +
Sbjct: 58 VRRTLIYKYEKELREDRVFSI--GNFSVASNVGSYRTARHPYKINFQYGTKIKQC--DDK 113
Query: 286 FIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRK-SNNEMVPKRDITVAD 343
F+P + E+ + T+ L+D++G+++ V S R S ++M+P D
Sbjct: 114 FVPADIYVIGDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKMIPIE----LD 169
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISL--STLGRSTVLVS 401
V+L+ + L ++ +VA+ K+ FQG + +T+ + VL +
Sbjct: 170 YDGFRFKVTLFGPYVDELNAFLASGETENVVVAVLLTKIKIFQGQATIQNTINATKVLFN 229
Query: 402 PDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-E 460
P A LK S G+ + + S+ D ++L+ +T+ L D
Sbjct: 230 PTFTAALLLKKRMVENDDSPS-----PGISKITEASKVSVEEDFLNLSPMTTVEGLKDCA 284
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
+ F++ +++I D WY +C CNKKV Y+C C K+ + RY++
Sbjct: 285 EEKCFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPD-EKMYFCSKCNKHVLNVTPRYMIKM 343
Query: 521 RVCDGSGEAWISIFNEEAERII 542
RV D + A +F+ +A +
Sbjct: 344 RVVDHTDSATFVLFDRDAAELF 365
>gi|391333842|ref|XP_003741319.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 269
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 18/260 (6%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
++V L +N I+ RV SK +R +K A EG +F LTD G +I + E
Sbjct: 19 KKVKLLSEINVETVGGRIEGRVISKSPLREWKKADAEGKLFTFNLTDNSG-EISCIVSGE 77
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
A + +G Y IS + ++ Q+ T + E+ L++ + +++ E F+P+
Sbjct: 78 LAEVLFPTISIGSCYEISGFRPKPSHPQYSTTSHSCEIQLSKITRIKKI--EGDFLPKKP 135
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVS-PTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+ + I E+ N VD+I +V +V P M R + +M K+++ + D++ RTV+
Sbjct: 136 QSLIKISEILDIENNKS-VDLIAIVYDVMIPQMLACR--DGQMREKQNVLLVDDSMRTVS 192
Query: 351 VSLWNE-LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL--VSPDLP-E 406
+ LW E + T G+E ++ I++ V ++ G L + +++L DL E
Sbjct: 193 LGLWGESIRTLDGKE-------GHVINIRAAAVKEYNGKKLLSTSSASILKHCESDLTRE 245
Query: 407 AKKLKSWYESEGKGTSMASI 426
++L W++ EG + A++
Sbjct: 246 EQELADWWDREGHSSEFAAL 265
>gi|195572615|ref|XP_002104291.1| GD20884 [Drosophila simulans]
gi|194200218|gb|EDX13794.1| GD20884 [Drosophila simulans]
Length = 268
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ SL P + +IK RV K + + G V+ + L DE G +I +F +
Sbjct: 40 IQPICSLTPGIYSSSIKARVIWKSEITQWSTGTKTGIVYIMHLLDESG-EITGIVFADYD 98
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
FYD+ Q G VY+IS + A +K N Y++ N+ ++ ++ IP+ K+N
Sbjct: 99 NGFYDQIQPGLVYHISGFEVEKAISSYKVSDNPYQLFFRPNTVLQ--LSACGQIPREKYN 156
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F+P+ ++ + + VD IG+ V R R+I + D V ++L
Sbjct: 157 FLPLLKVSSKAD-EDPVDAIGICTEVG------RLEERGGYFIREILLVDPDNHPVMLNL 209
Query: 354 WNELATN-VGQELLDNADKSPIVAIKSLKVGDFQG--ISLSTLGRSTVLVSPDLPEAKKL 410
W + A N VGQ + ++ +K + F + L+ + V ++PD+P+A L
Sbjct: 210 WQKEAVNFVGQ-------PTDVIVVKGAR-ARFHNNEMKLNASWYTNVQINPDIPDATDL 261
Query: 411 KSWYESE 417
+WY ++
Sbjct: 262 LAWYNNQ 268
>gi|21465964|pdb|1L1O|C Chain C, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
gi|21465967|pdb|1L1O|F Chain F, Structure Of The Human Replication Protein A (Rpa)
Trimerization Core
Length = 181
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKND 509
+ N GD KP +FS A + ++ + M Y+AC T CNKKV D Y CE C
Sbjct: 15 SENLGQGD-KPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEF 72
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
R I+ + D W++ F E AE I+G +A L ELK + ++ +++ +
Sbjct: 73 PNFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDK--NEQAFEEVFQNA 130
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ + RV V + YN+E R + TV V PVD+ + L+ I +
Sbjct: 131 NFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRR 177
>gi|294943193|ref|XP_002783789.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
gi|239896511|gb|EER15585.1| replication factor a 1, rfa1, putative [Perkinsus marinus ATCC
50983]
Length = 117
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 176 PLVSLNPYQ-GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
P+ ++ Y NWTIK RVT+K +R + NARG G VF+V+L D++G++I+ + FN AA
Sbjct: 6 PIREISSYSMRNWTIKARVTAKSPVRHFTNARGGGSVFSVDLLDKEGSEIRGSFFNAAAE 65
Query: 235 KFYDRFQLGKVYYISRGTLRVA 256
KF Q GKVY S+G +++
Sbjct: 66 KFDKLLQKGKVYTFSKGNVKIG 87
>gi|196018182|ref|XP_002118759.1| hypothetical protein TRIADDRAFT_62772 [Trichoplax adhaerens]
gi|190578288|gb|EDV18754.1| hypothetical protein TRIADDRAFT_62772 [Trichoplax adhaerens]
Length = 218
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 12/221 (5%)
Query: 5 VSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAI-LPSNLSS 63
+S AI I + +P + V ++ + KL+ RY SDG ++ L + L+
Sbjct: 3 LSAGAIQAICNGENPPTPIFQVAAVRKIQNEKLSVERYRIVLSDGIHAYSSVMLATQLNQ 62
Query: 64 EVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVK--SDESGI 121
V SG + K +I+L +Y N I ++ K L++ V++ E +I + K +D+S
Sbjct: 63 RVTSGELDAKAIIKLNNYTCN-IVQETRKVLVILDLTVLTCGSETDIIGQPKPYNDQSA- 120
Query: 122 IFKPKQEDEVKKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARL---AMTRRVHPLV 178
P + + + KP +S Q+ + + P L + R V P+
Sbjct: 121 ---PSKSNNYQPQQEIQQQKPSYAPTNRSMNQVT-NPRPTIHPQQNLVDKSENRIVFPIS 176
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE 219
SL PYQ WTI+ RVTSK +R + N+RGEG +F+V+L DE
Sbjct: 177 SLTPYQNRWTIRTRVTSKSEIRKWSNSRGEGKLFSVDLIDE 217
>gi|413948878|gb|AFW81527.1| hypothetical protein ZEAMMB73_249157 [Zea mays]
Length = 575
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 164/383 (42%), Gaps = 24/383 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L Y+ + I+V V+ K ++ A G + +++ L+D G + A + A
Sbjct: 12 LPDLTTYKKHAIIQVHVSRKW---SFHGATENGPLQHIDMVLSDCKGNSMYAEIPANLAE 68
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + ++Y ISR + A +K + D + + ++ A N +
Sbjct: 69 EKGALIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTIYTIIKPASNPPPTFSLYIYQL 128
Query: 295 VPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
P DE+ + + T+ +D++G + V+ ++ + RDI + D +++T+ ++L
Sbjct: 129 TPFDEIESQIQHKTKFLDVLGTITEVTALKTVHIEGQLSPTIIRDIMIEDLSRKTLKITL 188
Query: 354 WNELATNVG-QELLDNADKSPIVAIKSLKVGDF-QGISLSTLGRSTVLVSPDLPEAKKLK 411
W + AT+ Q + D K PI+A+ + F +G+ LS +P +PEA+ +
Sbjct: 189 WAKRATSFTIQNVYDPVSKKPILALFVGCLPKFYKGVYLSGGAACHWYFNPAIPEAEAYQ 248
Query: 412 S----WYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH----ITSNPSLGDEKPV 463
+ +Y + G +I L + ++ ++ + +T NP D
Sbjct: 249 NSITKYYAYKHGG---ETIQLHLPTQPEHALQTFQPPTIEHKTLEQLLTMNPY--DYPDT 303
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
+ ++ I WY +C C +K T + Y+C+ C+ + + +Y + R
Sbjct: 304 GYECTVTVTEIDTSNTWWYPSCTKCGRKTTPH-NTTYYCDLCKWDGYK--FKYKLKFRAS 360
Query: 524 DGSGEAWISIFNEEAERIIGCSA 546
D + A + F+ A I+G S
Sbjct: 361 DATAIAQMFCFDNIARYIVGKSC 383
>gi|218200560|gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indica Group]
Length = 705
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 22/328 (6%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W+IK ++ + + A E F++ L DE+G I AT++ F +Y
Sbjct: 16 WSIKAKILRMWDSVNF--ATDEIMSFDMLLMDEEGETIHATIWKNLIDNFRPMISENSIY 73
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
S ++ + K + V D ++ N++V+E + + F F + L VN
Sbjct: 74 AFSNFKVQESTK-YCPVDKDLKITFMYNTKVKEMKGASNKFKEYYFEFATRETLVDRVNK 132
Query: 307 TELV-DIIGVVQNVSPTMS--IRRKSNNEMVPK--RDITVADETKRTVTVSLWNELATNV 361
+++ D+IG++ + P S I + S N PK R+I + + V+LW +LA ++
Sbjct: 133 DKILSDVIGLLTKIKPIESRMIMKNSTNPR-PKDIREIELLLLDGAKIRVTLWGQLAHSL 191
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
++++ N + S V +F G+SL + + + ++PE K+ S + E
Sbjct: 192 NEDVIGNHTVV---VVTSTTVQEFNGLSLRSSSATRLYTDINIPETWKIISRHSDEQNLP 248
Query: 422 SMASIG-SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF--SIKAYISLIKPDQ 478
+ + S G+L + M+ +R +L IT N D K F + KA I ++ D
Sbjct: 249 KLMEVDKSTQGTLEE----QMFYNRKTLQEIT-NMGHDDTKSQDFICTTKATIDHLQ-DV 302
Query: 479 AMWYRACKTCNKKVTDALGSGYWCEGCQ 506
WY +C CNKKV + Y+CE C+
Sbjct: 303 TWWYMSCNDCNKKVVKKIDK-YYCEKCK 329
>gi|413945694|gb|AFW78343.1| hypothetical protein ZEAMMB73_306379, partial [Zea mays]
Length = 439
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 28/346 (8%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G I AT++ KF + G VY ++ +R +N +K V ND +
Sbjct: 3 LLDEEGNSIHATIYPPFIEKFRPLIKEGSVYNMTYFRVRASNNLYKPVPNDIMITFTNWK 62
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
++E+ + P ++ ID++ ++ + D IG+V +VS R K
Sbjct: 63 KLEQVIEIPPAFPTLTYSLTHIDQIHSRIDHKDYYTDAIGIVTSVSNVSPHRSKGQQASS 122
Query: 335 PKRDITVADETK-RTVTVSLWNELATNV-GQELLDNADKSP--IVAIKSLKVGDFQGISL 390
KR+I++ ++ +V V LW AT G+ + +N SP ++ + +L G+ L
Sbjct: 123 LKRNISICSASRGASVNVVLWGAQATLFPGERIYENGQNSPQIVLFVGTLVKKYADGLCL 182
Query: 391 STLGRSTVLVSPDLPEAKKLKSWYESEGKGTSM-ASIGSGLGSLAKNGARSMYSDRVSLT 449
+ ++P +PEA+ L S + K A++ S L A +
Sbjct: 183 TGSSPCKWYINPSIPEAETLMSSARGDHKPVKWNATVTS--SQLISPVAEEQKVSYIKYL 240
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKND 509
H N G E V +I+ K D WY +C+ C G Y C +
Sbjct: 241 HPFENK--GKEFLVTVTIR------KIDNKWWYNSCRKCACTAVTH-GDSYKC-----TN 286
Query: 510 EECS------LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
+C+ RY ++ D + + +F A+RI+ D L
Sbjct: 287 RDCANIAMPVQRYKILVIAGDETADTDFILFGRVAQRIVKRPCDML 332
>gi|345484741|ref|XP_003425113.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Nasonia vitripennis]
Length = 167
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
NWT K RVT K +++ Y G +FN +L D G QI+ +++ F+++ + KV
Sbjct: 39 NWTFKARVTHKTDIKNY----ASGNLFNFDLIDSSG-QIRCVVYHPLVEHFFEKVDVNKV 93
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
Y S L+ +NK + N +E+NL E S + E + IP K+NF+ + L
Sbjct: 94 YLFSNVLLKASNKTYNHYDNLFELNLYEASTITECTDNAVDIPLNKYNFINLINLSD-CK 152
Query: 306 GTELVDIIGVVQNV 319
+++D+IG++ N+
Sbjct: 153 RNDIIDVIGIITNI 166
>gi|391327595|ref|XP_003738283.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 296
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 122/233 (52%), Gaps = 14/233 (6%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
I+ RV S+ +R++ EG +F+ + ++ + I E + +++ +GK Y I
Sbjct: 51 IQGRVESESPIRSWSREGAEGIIFSF-IVNDSSSDINVVASGEICAELHEKISVGKCYVI 109
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
S L+ N Q+ + E+ L + S+V E + +P+ NF+ + E+G +
Sbjct: 110 SAFKLKKINPQYNITSHQLEIQLTKISKVTEIIG--INLPENTTNFITLAEIGSSAVNS- 166
Query: 309 LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDN 368
+VDI+G++ V+ + + K+++ + D+TK+ VT+SLW+E A ++L N
Sbjct: 167 MVDILGIIHEVADEQNFMCRDGTSR-KKKNVRIVDDTKKIVTLSLWSEHA-----DIL-N 219
Query: 369 ADKSPIVAIKS--LKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGK 419
+S V+I + ++V + + + L+T ++ ++ ++++L+ W+ EG+
Sbjct: 220 GMESQCVSIHNVVIRVFNMKKV-LTTTSSTSAKLAVITADSERLQKWWNEEGQ 271
>gi|413921320|gb|AFW61252.1| hypothetical protein ZEAMMB73_336018 [Zea mays]
Length = 594
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 157/385 (40%), Gaps = 49/385 (12%)
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
K+Y ISR + A FK V D ++ ++ + +++ + ++ P D+L Y
Sbjct: 99 KIYEISRFRISSARLMFKPVHMDKMIHFTYHTIINASLDTPPAFSRYVYHLTPFDQLESY 158
Query: 304 VNGTE-LVDIIGVVQNVS---PTMSIRRKSNNEMVPKRDITVADETKR------------ 347
+ E +D++GV+ VS P + ++S+N + + ET
Sbjct: 159 IQKNEYFLDVLGVITQVSALKPVGTHTQESSNVIKEIIIKDIKYETTTLIQHNFLQMFEF 218
Query: 348 ------------TVTVSLWNELATNVGQE-LLDNADKSPIVAIKSLKVG----DFQGISL 390
T+ V+LW E A E + D ++ PIV +L VG +FQGI L
Sbjct: 219 YIHHVTTICSDITMRVTLWAERARAFKLENVYDPLEQKPIV---TLFVGCLAKNFQGIYL 275
Query: 391 STLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH 450
+ +PD+ EA +ES+ ++S L + + H
Sbjct: 276 NGGTACRWYFNPDIREAAPYYQRFESQKIKLHISSEQEQLYVTKETNVEHKTLHELLELH 335
Query: 451 ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDE 510
+ P G + A I + W+ AC C + G GY+C C+ E
Sbjct: 336 PYAFPKQG------YQCTATIIEVPTTSRWWFPACTKCGRACKPQNG-GYYCPYCK--SE 386
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVT 570
LRY + DG+ A + F+ A+ ++G S + + LK Q+ + L ++
Sbjct: 387 AYILRYKLTFMGSDGTATAQMFCFDTVAQHVVGRSCETV--LK-QVTEAAPIPPDLAQIV 443
Query: 571 WVPHLLRVSVAQQEYNNEKRQRVTV 595
+ RV+V+ Q + +++ QR TV
Sbjct: 444 SLKFTFRVTVSNQTF-SQREQRPTV 467
>gi|413923361|gb|AFW63293.1| hypothetical protein ZEAMMB73_359781 [Zea mays]
Length = 391
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 28/363 (7%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G I A ++ ++F G VY + +R AN+ +K V+N ++ + +
Sbjct: 44 LLDEEGNSIHAQIYPPLCQQFSALLDEGGVYNLKYFLVRKANRFYKPVENCSMISFTKWT 103
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE + P +N PI++L ++ E D++GVV +S S+R + V
Sbjct: 104 TVEVVLQIPPAFPVCTYNLTPIEQLQPRMDYKEYFTDVLGVVSVISHVSSLRTRGRQAEV 163
Query: 335 PKRDITV--ADETKRTVTVSLWNELATNV-GQELLDNADKSP--IVAIKSLKVGDFQGIS 389
KR +T+ A + TV V LW E AT+ +++ ++D SP I+ + +L +S
Sbjct: 164 MKRTVTISNARDAGPTVDVVLWGERATSFPAEQVHRDSDSSPQIIIFVGTLVRSYADNVS 223
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGA-RSMYS--DRV 446
LS ++ +PE L++ E+ + + K GA R++ + +
Sbjct: 224 LSGGSSCKWFINAPVPEVNALRASTEANHRPV--------IWDQGKVGAERTIVAVPEHK 275
Query: 447 SLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC--EG 504
L I ++K + I + ++K D + WY ACK C + T G Y C
Sbjct: 276 KLKDIKYLHPFENKKKEWLVI---VKVLKIDSSWWYNACKKC-LRTTKPHGDTYRCTNNS 331
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQM 564
C N + RY + D + A F A+R+I ++ QL S+Q+
Sbjct: 332 CD-NIGSPTPRYKIRLTAEDDTDTAEFIFFGRMAQRLI----KKMWTPSYQLIHLVSFQV 386
Query: 565 KLK 567
KL+
Sbjct: 387 KLQ 389
>gi|358347814|ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|358347930|ref|XP_003638003.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355503881|gb|AES85084.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355503938|gb|AES85141.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 178/437 (40%), Gaps = 19/437 (4%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + P+ ++ + N ++VRV + + N + + + L D+ G +IQA+
Sbjct: 1 MAPLITPVAAIVAGKINIKLRVRVVHVWTVSEFNNPNEDNSIHMLLLDDKLG-KIQASAK 59
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ + G Y I + + +++ Q+ +++NL +N++ + + A IP
Sbjct: 60 KHLVPRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKI--DAATIPL 117
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
F+F+P +E+ ++VD+IG Q V R N D+T+ D R V
Sbjct: 118 NHFDFMPFNEILEAEREEKVVDVIG--QVVERDELKERDVNGRRSKIMDLTLQDSESRRV 175
Query: 350 TVSLWNELATNVGQELLDNADKSP-IVAIKSLKVGDFQGI---SLSTLGRSTVLVSPDLP 405
+LW A + L + SP IV I+ K+ +QGI S + G + +L+ DLP
Sbjct: 176 HCTLWANYAERMNSFLAAHDPSSPVIVLIQQCKLKKYQGIMGVSNAFFG-TKLLLEGDLP 234
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFF 465
EA + KS + G SI S S+ D + +T + +
Sbjct: 235 EAIEFKSKIDG-GDVQVSQSISQNTTSTVV----SLVDDMLQTKRMTIEDLIEATEQCQG 289
Query: 466 SIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDG 525
+ A I I+ + + +Y+AC C +V G Y C C R+ + +V D
Sbjct: 290 IVLATICGIESEYSWYYQACTKCAGRVRTVAGRLY-CGKCNTGRNAVP-RFKLHVQVMDN 347
Query: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
+G +F+ + + ++ + +Q + + Y L L +V V+
Sbjct: 348 TGSTSFILFDRNVSSYVNRTVQDM--IDAQPNNSSDYPSDLDSFVGKRMLFKVEVSDGNL 405
Query: 586 NNEKRQRVTVRAVAPVD 602
+ R R A D
Sbjct: 406 LHNWRNYAVKRTTAEED 422
>gi|242093032|ref|XP_002437006.1| hypothetical protein SORBIDRAFT_10g016776 [Sorghum bicolor]
gi|241915229|gb|EER88373.1| hypothetical protein SORBIDRAFT_10g016776 [Sorghum bicolor]
Length = 958
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 143/349 (40%), Gaps = 36/349 (10%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G I A ++ +F + G VY +S +R + K ++ V ND+ +N +
Sbjct: 502 LIDEEGNCIHAQIYPPDHEQFKPLIKEGSVYNLSYFRVRKSGK-YRPVDNDHMINFTRWT 560
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV-DIIGVVQNVSPTMSIRRKSNNEMV 334
EE V P ++ P+++L T D+IGVV +S S+R ++
Sbjct: 561 SAEEVVEIPPAFPMYTYSLTPMEQLPPCAEETTFFTDVIGVVTMLSNVSSLRIRTRQSES 620
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSP--IVAIKSLKVGDFQGISLST 392
KR +T+ + + ++ V LW E AT E + +P ++ + +L +SLS
Sbjct: 621 LKRTVTICNASGASLDVVLWGERATAFPAEQVHRDRTTPQTVIFVGALVKSYADNVSLSG 680
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHIT 452
++ ++PEAK L A+ GS + K S+ V+
Sbjct: 681 GPSCKWYINFEVPEAKAL-------------AASGSNIYQPVKWEQHMASSEPVAFAP-P 726
Query: 453 SNPSLGDEKPVF-FSIK-----AYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQ 506
+ + D K + F K +++ K D++ WY ACK C K + C
Sbjct: 727 EHKKVSDIKLLHPFKYKKTEWLVTVTVQKIDKSWWYNACKKC-LKTARPFHDSFRC---- 781
Query: 507 KNDEECSL------RYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
+ +C RY + D +G+ IF A+R+ D L
Sbjct: 782 -TEPKCGTIGVPVPRYKLCISAGDETGDTEFVIFGRIAQRLTRKPVDTL 829
>gi|414590353|tpg|DAA40924.1| TPA: hypothetical protein ZEAMMB73_767937 [Zea mays]
Length = 519
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 146/341 (42%), Gaps = 23/341 (6%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L+D G + A + A + + ++Y ISR + A +K + D + +
Sbjct: 3 LSDCKGNSMYAEIPANLAEEKGALIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTIYT 62
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMV 334
++ N P + P DE+ + + T+ +D++G + V+ ++ +
Sbjct: 63 IIKPGSNPPPTFPLYIYQLTPFDEIESQIQHKTKFLDVLGTITEVTALKTVHIEGQLSPT 122
Query: 335 PKRDITVADETKRTVTVSLWNELATNVG-QELLDNADKSPIVAIKSLKVGDF-QGISLST 392
RD+ + D +++T+ ++LW + AT+ Q + D K PI+A+ + F +G+ LS
Sbjct: 123 IIRDVMIEDLSRKTLKITLWAKRATSFTIQNVYDPVSKKPILALFVGCLPKFYKGVYLSG 182
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH-- 450
+P +PEA+ ++ + E +I L + ++ ++ ++ H
Sbjct: 183 GAACHWYFNPAIPEAEAYQNRHGGE-------TIQLHLPTQPEHALQTF--QPPTIEHKT 233
Query: 451 ----ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQ 506
+T NP D + ++ I WY +C C +K T + Y+C+ C+
Sbjct: 234 LEQLLTMNPY--DYPDTGYECTVTVTEIDTSNTWWYPSCTKCGRKTTPH-NTTYYCDLCK 290
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
+ + +Y + R D + A + F+ A I+G S +
Sbjct: 291 WDGYK--FKYKLKFRASDATAIAQMFCFDNIARYIVGKSCE 329
>gi|47227766|emb|CAG08929.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 447 SLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEG 504
+L + S EK +++ A I ++ + + Y+AC + CNKKV D + CE
Sbjct: 23 TLADVKSEHLGHGEKADYYTCIATIVFLRKENCL-YQACPSQDCNKKVVDQQNGMFRCEK 81
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQM 564
C K R I+ A + D W++ F E AE I+G +A L +LK ++ ++
Sbjct: 82 CDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKE--SNEAAFNE 139
Query: 565 KLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ + + R V + YN+E R + TV V PVD SK L+ I K
Sbjct: 140 VFQQANFNSFIFRSRVKLETYNDESRIKATVMEVKPVDHKDYSKRLIMNIRK 191
>gi|24960752|gb|AAN65446.1| Putative helicase [Oryza sativa Japonica Group]
gi|108706525|gb|ABF94320.1| hypothetical protein LOC_Os03g08400 [Oryza sativa Japonica Group]
Length = 764
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 191/422 (45%), Gaps = 40/422 (9%)
Query: 168 LAMTR-RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQA 226
+A++R + P+ L P + ++ I VR++ R N ++ L D+ G I A
Sbjct: 237 VAISRMNITPIAELRPGRYDYMICVRISRIWEFRG-TNEDDNIKHLDLVLLDQKGDAIYA 295
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF 286
+ +A Q G + YIS+ T+ A ++ V N Y + LN+ + + EA ++
Sbjct: 296 EIPPDAIPLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMD 355
Query: 287 IPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
P+ F+ V D+L + + T+ +D+IG + VS I S++ + +R + + D +
Sbjct: 356 FPKYTFDLVSFDKLHDFTSKTDRFLDVIGKIIAVSNAAMISTSSSDYRM-RRIVKLQDLS 414
Query: 346 KRTVTVSLWNELATNV-GQELLDNADKSPIVAI---KSLKV--GDFQGISLSTLGRSTVL 399
+T+ +SL + A G+ +L+ + I+AI S+K+ G ++ +S +T R +
Sbjct: 415 GKTIDLSLSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYI- 473
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLG 458
D+PE K + + S ++ RS+ + L I +P +
Sbjct: 474 NENDIPEIKMFQKCLPPHADPIQKLYLQSD-----EDMQRSIEHKTLAELKEI--DPFVD 526
Query: 459 -DEKPVFFSIKAYISLIKPDQAMWYRACKTCN-KKVTDALGSGYWC--EGCQKNDEECSL 514
DEK + A I I+ + Y+ACK CN K + D GS C E C E
Sbjct: 527 KDEK---YQCTATIIGIQERKTWCYQACKLCNCKMIWD--GSILKCKKENCPCRQYEYKY 581
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN----------ELKSQLGDDNSYQM 564
+ +A DG+ + +F ++ +IG +A+ + E+K+ +G ++ +
Sbjct: 582 KIPFIAN--DGTASLELVLFEKKGTELIGRTAETMKRQYDINQTPPEIKAWIGHKFTFIV 639
Query: 565 KL 566
K+
Sbjct: 640 KV 641
>gi|215687058|dbj|BAG90904.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694034|dbj|BAG89233.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 192
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H L+S L P + I RV+ + +++ + + + +L DE G M+
Sbjct: 3 HALISQLYPGDSDKKILARVS---RLWHFRDLNDDTNILHTDLVLLDEVGNSTHVQMYRG 59
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
A G VYYI T++ AN+ ++ V ND+ + ++ + +EE ++ A P
Sbjct: 60 AIEVLKPLIHEGNVYYIESFTVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPAIT 119
Query: 292 FNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
F+ P E+ V+ VDI+GV+ +S T ++R +S + KR + + D + T+
Sbjct: 120 FSLTPFQEIPSLVDKNIFYVDIMGVITEISSTSTVRPRSRDADSLKRTLQICDASNSTLP 179
Query: 351 VSLWNELAT 359
V+LW + +T
Sbjct: 180 VTLWGDRST 188
>gi|297596199|ref|NP_001042171.2| Os01g0175300 [Oryza sativa Japonica Group]
gi|255672925|dbj|BAF04085.2| Os01g0175300 [Oryza sativa Japonica Group]
Length = 523
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 187/415 (45%), Gaps = 39/415 (9%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
+ P+ L P + ++ I VR++ R N ++ L D+ G I A + +A
Sbjct: 3 ITPIAELRPGRYDYMICVRISRIWEFRG-TNEDDNIKHLDLVLLDQKGDAIYAEIPPDAI 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
Q G + YIS+ T+ A ++ V N Y + LN+ + + EA ++ P+ F+
Sbjct: 62 PLLNQYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTFD 121
Query: 294 FVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
V D+L + + T+ +D+IG + VS I S++ + +R + + D + +T+ +S
Sbjct: 122 LVSFDKLHDFTSKTDRFLDVIGKIIAVSNAAMISTSSSDYRM-RRIVKLQDLSGKTIDLS 180
Query: 353 LWNELATNV-GQELLDNADKSPIVAI---KSLKV--GDFQGISLSTLGRSTVLVSPDLPE 406
L + A G+ +L+ + I+AI S+K+ G ++ +S +T R + + D+PE
Sbjct: 181 LSGKRAVEFDGETILEVGQNNHIIAIFVGTSMKILKGTYEFLSGTTACRWYINEN-DIPE 239
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLG-DEKPVF 464
K + + S ++ RS+ + L I +P + DEK
Sbjct: 240 IKMFQKCLPPHADPIQKLYLQSD-----EDMQRSIEHKTLAELKEI--DPFVDKDEK--- 289
Query: 465 FSIKAYISLIKPDQAMWYRACKTCN-KKVTDALGSGYWC--EGCQKNDEECSLRYIMVAR 521
+ A I I+ + Y+ACK CN K + D GS C E C E + +A
Sbjct: 290 YQCTATIIGIQERKTWCYQACKLCNCKMIWD--GSILKCKKENCPCRQYEYKYKIPFIAN 347
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELN----------ELKSQLGDDNSYQMKL 566
DG+ + +F ++ +IG +A+ + E+K+ +G ++ +K+
Sbjct: 348 --DGTASLELVLFEKKGTELIGRTAETMKRQYDINQTPPEIKAWIGHKFTFIVKV 400
>gi|195330774|ref|XP_002032078.1| GM26361 [Drosophila sechellia]
gi|194121021|gb|EDW43064.1| GM26361 [Drosophila sechellia]
Length = 228
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 19/232 (8%)
Query: 188 TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYY 247
+IK RV K + ++ + G V+ + L DE G +I +F + FY + Q G VY
Sbjct: 13 SIKARVIWKSEITQWRKGQKCGIVYIMHLLDESG-EITGIVFADYDNGFYGQIQPGLVYL 71
Query: 248 ISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGT 307
IS + A +K N Y++ N +E ++ IP+ K+NF+P+ ++ +
Sbjct: 72 ISGFDVEEAISDYKVSDNPYQLFFRHNIVLE--LSACGRIPREKYNFLPLVKVSSKAD-K 128
Query: 308 ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN-VGQELL 366
+ VD IG+ ++ R R+I + D V ++LW + A N VGQ
Sbjct: 129 DPVDAIGI------CTAVGRLEERRGFFIREILLVDPFYHPVMLNLWQKEAVNFVGQ--- 179
Query: 367 DNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
+ ++ +K + + L+ + V ++PD+P+A L +WY ++
Sbjct: 180 ----PNDVIVVKGARAQPHNNKMKLNASWYTNVQINPDIPDATALLAWYNNQ 227
>gi|401885438|gb|EJT49555.1| damaged DNA binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 182
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
+K +FS+ A I IK + Y AC + CNKK+ D G+ + CE C + RYI
Sbjct: 25 DKTDYFSVCATILYIK-QETFSYPACPGEGCNKKLIDE-GAEWRCEKCNRTYPGPVHRYI 82
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD-NSYQMKLKEVTWVPHLL 576
+ V D +G WI+ FNE E+I+G SA+EL +LK + + Y + W
Sbjct: 83 LQMNVIDHTGSFWITGFNEVGEQIMGVSANELFKLKQESDPEAEKYFTRAAGREWD---F 139
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
++ Q +N+ R R R+ AP+++A S+ L+++I
Sbjct: 140 KIMAKQDFFNDTARVRYQARSCAPINYAQSSQALVDKI 177
>gi|38346586|emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa Japonica Group]
Length = 1410
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 15/238 (6%)
Query: 154 ILRDQNGNMAPAARLAMTRRV-------HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNA 205
++ D +GN + R + + H ++S L P GN I VR++ M + +
Sbjct: 605 LIVDDDGNCSSETRNVVYHEILQAIEMDHCIISKLEPGLGNPRIYVRLS---RMWNFNDP 661
Query: 206 RGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTV 263
+ + + +V L DE I A +F + F GK+YY++ +R ++ +K V
Sbjct: 662 KDDISLLHVALVLVDETEGSIAAQIFPPDGKLFKPLLSEGKIYYLTHYIVRNCSRSYKPV 721
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPT 322
N + + VEE VN P ++ ++L + N D IGV+ VS
Sbjct: 722 SNSLAIAFTGWTIVEEYVNAPTSFPFYTYSLKSFNQLTALLDNKDSFTDTIGVITEVSSI 781
Query: 323 MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL 380
S+R ++ + KR++ ++D T+ VSLW + AT E KS I+ IK L
Sbjct: 782 TSVRSRTRDGDSLKRNVFISDANNATIRVSLWGDRATEFPAEESSLGIKS-IIEIKDL 838
>gi|385305380|gb|EIF49361.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 138
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 255 VANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIG 314
+A Q+ +++ YE+ + ++ +EE N+ +P+ F+FV +D++ NGT ++D++G
Sbjct: 1 MAKPQYSNLKHQYELQFDRDTVIEEC-NDDXGVPKLHFDFVKLDQVXNLDNGT-VIDVLG 58
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPI 374
+++ V I +S + +R++ + D+T VTV+LWN+ A N +
Sbjct: 59 ILKEVHDKQEIVSRSTGKPFDRREVEIVDDTHFAVTVALWNKHAREF------NLSTGTV 112
Query: 375 VAIKSLKVGDFQGISLS 391
VA K +V D+ G SLS
Sbjct: 113 VAFKGARVQDYGGKSLS 129
>gi|297719755|ref|NP_001172239.1| Os01g0223400 [Oryza sativa Japonica Group]
gi|56783998|dbj|BAD81453.1| unknown protein [Oryza sativa Japonica Group]
gi|56784071|dbj|BAD81308.1| unknown protein [Oryza sativa Japonica Group]
gi|255673012|dbj|BAH90969.1| Os01g0223400 [Oryza sativa Japonica Group]
Length = 249
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 9/204 (4%)
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL 271
F + L DE GT I A ++ F GKVYYI +R N+Q+K V N +
Sbjct: 50 FGLVLIDEKGTSIAAQIYPPCDEIFRPIITEGKVYYIKYFRVRKCNRQYKPVDNCMSIYF 109
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSN 330
+++EE V+ A IP ++ P L V + DIIG++ +SP +
Sbjct: 110 TRWTKLEERVDPPAEIPLYTYSLSPFGGLRSRVGKKDSFTDIIGIITQLSPVTPL----- 164
Query: 331 NEMVPKRDITVADETKRTVTVSLWNELATNV-GQELLDNADKSP-IVAIKSLKVGDFQGI 388
+ KR + + + + V+LW E AT+ E+ K P IV V + +
Sbjct: 165 -QGTVKRSVFIRNTDNAILNVALWGERATSFPADEVFVAGQKEPQIVIFVGTLVKGYGDV 223
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKS 412
SLS ++ D PE L++
Sbjct: 224 SLSGNSACKWYINADTPEVISLRN 247
>gi|391331921|ref|XP_003740388.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
T IQ FN+ +F + Q + Y I R AN F T + E+ LN+ +++
Sbjct: 13 STDIQIVAFNDNCLQFSEILQEHQEYDIEGFACRQANPIFNTTSSKLEIVLNKGTKIRAL 72
Query: 281 VNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDIT 340
T I + N+V EL + + ++VD+ GV+ +VSP RK + + + KR++
Sbjct: 73 NRATLRIAEKSPNYVSFSEL-QSMKENDIVDVCGVIIHVSPVEEFTRKRDGKPIVKRELR 131
Query: 341 VADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLV 400
+ DE ++ +T++LWNE EL++ V+++ ++ F+G +LS S +
Sbjct: 132 IVDEDRKILTINLWNE---RTNTELVEKV----AVSVRHGRINIFRG-NLSLNCESASKI 183
Query: 401 SPDLPEAK--KLKSWYES 416
DL + KL W+E+
Sbjct: 184 DFDLGNERLLKLSQWWEN 201
>gi|442751523|gb|JAA67921.1| Hypothetical protein [Ixodes ricinus]
Length = 151
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+ + V+ +LW E A + + P++AIK +V DF G SLS L STV+V+PD+
Sbjct: 4 SGKVVSATLWGEDADKF------DGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDI 57
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
PEA KL+ W++SEG+ ASI S ++G ++ +L + S +K +
Sbjct: 58 PEAYKLRGWFDSEGQALDGASI-----SDLRSGGTGSATNWKTLYEVKSENLGQGDKADY 112
Query: 465 FSIKAYISLIKPDQAMWYRACKT--CNKKVTD 494
FS A + ++ + +M Y+AC T CNKKV D
Sbjct: 113 FSCVATVVYLRKENSM-YQACPTQDCNKKVID 143
>gi|328705572|ref|XP_003242847.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 386
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V L++L+ + +K+ V K + TY + R V NV + D G ++ + FN +
Sbjct: 154 VKDLITLSNGSCPFVLKLTVVKKYAINTYSSCR----VLNVNMMDSTGV-VRVSAFNTLS 208
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
+ F+ K YY++ L+ + QF E+ L +S + E++++ Q K
Sbjct: 209 DSLNEIFEENKTYYLADTILK--HNQFGV-----ELKLQSHSVIIESIDKI----QPKIQ 257
Query: 294 FVPIDELGRYV--NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
++ + + N D+IGV + + ++ + KR+I + D + T+T+
Sbjct: 258 YIKTSNFNKLLENNPNTFCDLIGVCIEIGDIEACSNSTSRTEIGKREIVLIDMSMATITL 317
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL-VSPDLPEAKKL 410
+W + ++ D PIV +K + F G ++ + +VL ++P+L E +L
Sbjct: 318 KVWGDQVNKFDEKF----DNPPIVMVKQAVLKQFNGAKYFSMVKFSVLFINPNLAEVHQL 373
Query: 411 KSWYE 415
K WY+
Sbjct: 374 KEWYK 378
>gi|302804959|ref|XP_002984231.1| hypothetical protein SELMODRAFT_423315 [Selaginella moellendorffii]
gi|300148080|gb|EFJ14741.1| hypothetical protein SELMODRAFT_423315 [Selaginella moellendorffii]
Length = 241
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 23/233 (9%)
Query: 334 VPKRDITVADETKRTVTVSLWN---ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISL 390
+ KR + + D++ +V + LW+ E ++ QE +D+ + PI+ +K KV D+ G SL
Sbjct: 1 MKKRTLCLGDDSGHSVDLCLWDLKAEEESSYIQERIDSGVQ-PIICVKGGKVSDYNGKSL 59
Query: 391 STLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTH 450
S +G ST+L+ P++ L+ W ++ + L+ + +R S +L+
Sbjct: 60 SAIGVSTILIEPEMEAVADLREW-------MTLYYNITNFIHLSTSSSRQTVSCTTTLSE 112
Query: 451 ITSNPSLGDEK--PVFFSIKAYISLIKPDQAMWYRACKT------CNKKVTDALGSGYWC 502
I SN L K P++ I A + +K ++ +Y AC C KK T G++C
Sbjct: 113 I-SNMQLKVLKSSPIYRVI-ATVKEMKTNE-FYYNACINVMNAWQCGKK-TSRTADGWFC 168
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQ 555
C +Y + + D S W F E A+ I+G A +L ++ +
Sbjct: 169 SYCNIESANMEFKYALKMCIEDSSSHVWAIAFQEAAQEIVGIPAKKLATMRDE 221
>gi|147843413|emb|CAN79980.1| hypothetical protein VITISV_029186 [Vitis vinifera]
Length = 266
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 270 NLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
+L+ EVEEA NE FIP+ KF FV I+ELG YVNG ELVD+ GVVQ+VSPTM
Sbjct: 160 SLHYFKEVEEASNEETFIPEAKFKFVDIEELGPYVNGKELVDVSGVVQSVSPTM 213
>gi|413934560|gb|AFW69111.1| hypothetical protein ZEAMMB73_279578 [Zea mays]
Length = 357
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 15/293 (5%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G I A ++ ++F G VY + +R AN+ +K V+N ++ + +
Sbjct: 44 LLDEEGNSIHAQIYPPLCQQFSALLDEGAVYNLKYFLVRKANRFYKPVENCNMISFTKWT 103
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE + P +N PI++L V+ E D++GVV +S S+R + V
Sbjct: 104 TVEVVLQIPPAFPVCTYNLTPIEQLQARVDYKEYFTDVVGVVSVISHVSSLRTRGRQAEV 163
Query: 335 PKRDITV--ADETKRTVTVSLWNELATNVGQELLDNADKSP---IVAIKSLKVGDFQGIS 389
KR +T+ A +T TV V LW E AT E + +S IV + +L +S
Sbjct: 164 MKRTVTISNARDTGPTVDVVLWGERATTFPAEQIHRDSRSSPQIIVFVGTLVRSYADNVS 223
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
LS ++ LPE L++ E T+ + G A + L
Sbjct: 224 LSGGSSCKWYINAPLPEVNALRASAE-----TNHNPVIWDQGKAAAESTVIAVPEYKKLK 278
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC 502
I ++K + + I ++K D++ WY ACK C + T G Y C
Sbjct: 279 DIKYLHPFENKKKEWLVV---IKILKIDRSWWYNACKKC-LRTTKPHGDTYKC 327
>gi|328909495|gb|AEB61415.1| replication protein a 70 kda DNA-binding subunit-like protein,
partial [Equus caballus]
Length = 187
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKND 509
+ N GD K +FS A + ++ + M Y+AC + CNKKV D Y CE C
Sbjct: 21 SENLGQGD-KADYFSSVATVVYLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDSEF 78
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
R I+ + D W++ F E AE I+G + L ELK + ++ +++ +
Sbjct: 79 PSFKYRMILSVNIADFQENQWVTCFQESAEAILGQNTAYLGELKEK--NEQAFEEVFQNA 136
Query: 570 TWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
+ R+ V + +N+E R + TV V PVD+ + L+ I K
Sbjct: 137 NFRSFTFRIRVKLETFNDESRIKATVMDVKPVDYREYGRRLIMNIRK 183
>gi|70914008|ref|XP_731701.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56501834|emb|CAH83538.1| hypothetical protein PC300559.00.0 [Plasmodium chabaudi chabaudi]
Length = 90
Score = 73.2 bits (178), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 199 MRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANK 258
+R + EG VFN+EL DE G +I+ F +A K+YD ++GK+Y IS+G ++ ANK
Sbjct: 1 IRKFYTGNKEGKVFNIELCDESG-EIKVNFFGKAVDKWYDYLEVGKIYKISKGNIKSANK 59
Query: 259 QFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+F T+++D E+ L+ENS +E IP+
Sbjct: 60 KFNTLKHDCEITLDENSILELLEENDMNIPK 90
>gi|38424033|dbj|BAD01693.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|38637631|dbj|BAD03911.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 445
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 26/226 (11%)
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ + G G +F+ +L D+ G I A ++ A + KVYYI T+R AN+
Sbjct: 28 FCDLNGSGNIFHTDLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTVRYANRT 87
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL-VDIIGVVQN 318
++ V N + ++ + EE + A P F+ P ++ V+ T VD++GV+
Sbjct: 88 YRPVDNSLMIVFSKWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYVDVMGVITE 147
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
V +R KS N AD KRT+ + + GQ ++ ++
Sbjct: 148 VGSPTVVRPKSRN----------ADSLKRTIQIC-----DASAGQT------QAQVIVFV 186
Query: 379 SLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTS 422
V D+ G+ L+ G S ++ D+PE +LK + + + S
Sbjct: 187 GTLVKDYTGLGLTVTGSSPCKWYLNLDIPEVLELKESFSANFRPVS 232
>gi|41393261|gb|AAS01984.1| expressed protein, with alternative splicing isoforms [Oryza sativa
Japonica Group]
Length = 545
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 166/423 (39%), Gaps = 42/423 (9%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W ++VR T T N + ++ L DE G + A + +F + G VY
Sbjct: 16 WRVRVRATRFSEFTT-ANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEGAVY 74
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVN 305
YI + A Q++ V ++ V E + P + DEL R
Sbjct: 75 YIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDELRARAYK 134
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE- 364
+ D IG++ + P ++ + V IT E TV V+LW AT E
Sbjct: 135 KDIISDAIGIMTAIGPVQTVSYAGVMKAVLNDHITNGRE---TVVVALWGPHATQFHAEN 191
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
L AD +V + F G+++ R L + + WY + +++
Sbjct: 192 LQQQADNGHVVML-------FVGLTVKFRDRQLAL------QGSTVCRWYPNAPIQETIS 238
Query: 425 SIGSGLGSL-------AKNGARSMYSDRVS-LTHITSNPSLGDEKPVFFSIKAYISLIKP 476
I S G+ A G + + +VS + + + +LG+ + + I + P
Sbjct: 239 LISSLHGNPQVVRMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVP 294
Query: 477 DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA-----RVCDGSGEAWI 531
+ WY AC T K+ T G+ Y C C + E R +++ D + A
Sbjct: 295 AEPWWYIACST-YKRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAEF 353
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
+ F E E++IG LN + S G + ++K + +++R SV++ + +R
Sbjct: 354 TFFGEIGEQLIGRPV--LNLVASVHGARDIVPPEIKAIFGRQYVIRTSVSR---GSLQRN 408
Query: 592 RVT 594
RV+
Sbjct: 409 RVS 411
>gi|195499029|ref|XP_002096774.1| GE24867 [Drosophila yakuba]
gi|194182875|gb|EDW96486.1| GE24867 [Drosophila yakuba]
Length = 189
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G +I +FN FY Q G VY S +R A ++ K N Y++ L N+
Sbjct: 3 LLDESG-EITGVVFNNLVNVFYASIQTGLVYIFSGFEVRQAEQRLKVSDNPYQVFLLGNT 61
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
VE + ++ IP+ K+NF+P+ ++ ++ E VD IG+ V R N
Sbjct: 62 VVELSASDR--IPREKYNFLPLSKVSSILD-MEPVDAIGICSEV------RELDNRAGYF 112
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLG 394
R+I + D + V ++LW + A N ++ +K + I L+
Sbjct: 113 IREILLVDHDYQCVMLNLWEKQAVNF------EGKPDDVIVVKGARAQTHNNEIKLNAGW 166
Query: 395 RSTVLVSPDLPEAKKLKSWYESE 417
+ V ++PD PEA + WY+++
Sbjct: 167 YTNVQINPDNPEATSMLEWYDNQ 189
>gi|115456687|ref|NP_001051944.1| Os03g0855700 [Oryza sativa Japonica Group]
gi|108712184|gb|ABF99979.1| expressed protein [Oryza sativa Japonica Group]
gi|113550415|dbj|BAF13858.1| Os03g0855700 [Oryza sativa Japonica Group]
Length = 599
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 166/423 (39%), Gaps = 42/423 (9%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W ++VR T T N + ++ L DE G + A + +F + G VY
Sbjct: 70 WRVRVRATRFSEFTT-ANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEGAVY 128
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVN 305
YI + A Q++ V ++ V E + P + DEL R
Sbjct: 129 YIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDELRARAYK 188
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE- 364
+ D IG++ + P ++ + V IT E TV V+LW AT E
Sbjct: 189 KDIISDAIGIMTAIGPVQTVSYAGVMKAVLNDHITNGRE---TVVVALWGPHATQFHAEN 245
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
L AD +V + F G+++ R L + + WY + +++
Sbjct: 246 LQQQADNGHVVML-------FVGLTVKFRDRQLAL------QGSTVCRWYPNAPIQETIS 292
Query: 425 SIGSGLGSL-------AKNGARSMYSDRVS-LTHITSNPSLGDEKPVFFSIKAYISLIKP 476
I S G+ A G + + +VS + + + +LG+ + + I + P
Sbjct: 293 LISSLHGNPQVVRMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVP 348
Query: 477 DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA-----RVCDGSGEAWI 531
+ WY AC T K+ T G+ Y C C + E R +++ D + A
Sbjct: 349 AEPWWYIACST-YKRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAEF 407
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
+ F E E++IG LN + S G + ++K + +++R SV++ + +R
Sbjct: 408 TFFGEIGEQLIGRPV--LNLVASVHGARDIVPPEIKAIFGRQYVIRTSVSR---GSLQRN 462
Query: 592 RVT 594
RV+
Sbjct: 463 RVS 465
>gi|108862781|gb|ABA99343.2| hypothetical protein LOC_Os12g35400 [Oryza sativa Japonica Group]
Length = 735
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 36/344 (10%)
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ +A+ E F+ +L D G I A +F K+ GKVYY+ T++ N+
Sbjct: 320 FCDAKDESNFFHKDLLLLDAKGNSIHAHIFPPLTEKYKPLLTEGKVYYLHSYTVKYGNRL 379
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV-NGTELVDIIGVVQN 318
++ V N+ + +E+EE + A P ++ +++ V N VD++GV+
Sbjct: 380 YRPVPNEMMILFTTWTEIEECIGGPAGFPTIVYSLTSYNDVPNLVGNVDRFVDVVGVITE 439
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
++ +R KS K+D + + V+LW E A E + NA K K
Sbjct: 440 ITTPTMLRPKSRKADSLKKD---SSNINSILNVALWGERALAFQAEDIYNAGK------K 490
Query: 379 SLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGA 438
++ F G + +S + + + Y GK S + GL K
Sbjct: 491 EPQIVLFVGTLVKDYTKSGIDSKIGMMYIFSHNNRYTDLGKNCSQS---DGL----KQQP 543
Query: 439 RSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGS 498
M + L ITS I I + + WYR+C+ C K G
Sbjct: 544 LYMKMTLLRLRFITS---------------VTIRKICNENSWWYRSCQKCFKG-AKPYGY 587
Query: 499 GYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
Y C C + RY + D S A +F + A+R++
Sbjct: 588 TYKCGSCSWIGMA-TPRYKLALTAGDDSDNAEFILFGKTAQRLV 630
>gi|391325776|ref|XP_003737403.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391325887|ref|XP_003737458.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391326850|ref|XP_003737923.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391332922|ref|XP_003740876.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391333156|ref|XP_003740987.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
gi|391341618|ref|XP_003745124.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 280
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 28/244 (11%)
Query: 184 QGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLG 243
+G ++ RV SK ++ + G G +FN ++D G +I ++A + +D +G
Sbjct: 41 KGCGQVEGRVKSKTPVKHWSKGDGSGKIFNFVMSDTSG-EINVIASGDSAEEIFDMITVG 99
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF--------V 295
+ Y I+ ++ N Q++ ++ E+ L + S+V IP T + V
Sbjct: 100 QCYKINAYKVKAVNPQYRATDHECELQLTKLSKV---------IPITGNDLPKIQAQTTV 150
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
++ L + VN T VDI+ VV +V P + + V K+ +TV D++ + V + LW+
Sbjct: 151 LMELLTKPVNTT--VDILVVVFDVRPPQTFNCRDGINRV-KQTVTVLDDSMKMVNLGLWS 207
Query: 356 ELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSWY 414
E VG+ LD + ++ +++L+V D+ G LST + + + +A++L+ W+
Sbjct: 208 EF---VGK--LDGKEGEAVI-LQNLQVRDYNGTRQLSTTTNTIIREAAGDADAERLRQWF 261
Query: 415 ESEG 418
+ +G
Sbjct: 262 KVDG 265
>gi|108712185|gb|ABF99980.1| expressed protein [Oryza sativa Japonica Group]
Length = 569
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 166/423 (39%), Gaps = 42/423 (9%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W ++VR T T N + ++ L DE G + A + +F + G VY
Sbjct: 70 WRVRVRATRFSEFTT-ANEPDKILRLDLVLLDEQGDMMDAQIPGRRVVQFKPLLKEGAVY 128
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVN 305
YI + A Q++ V ++ V E + P + DEL R
Sbjct: 129 YIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTEDTGPPSTFPSYACKILSFDELRARAYK 188
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE- 364
+ D IG++ + P ++ + V IT E TV V+LW AT E
Sbjct: 189 KDIISDAIGIMTAIGPVQTVSYAGVMKAVLNDHITNGRE---TVVVALWGPHATQFHAEN 245
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
L AD +V + F G+++ R L + + WY + +++
Sbjct: 246 LQQQADNGHVVML-------FVGLTVKFRDRQLAL------QGSTVCRWYPNAPIQETIS 292
Query: 425 SIGSGLGSL-------AKNGARSMYSDRVS-LTHITSNPSLGDEKPVFFSIKAYISLIKP 476
I S G+ A G + + +VS + + + +LG+ + + I + P
Sbjct: 293 LISSLHGNPQVVRMIEANFGQKEAINVKVSDICDLNPHEALGNS----YVVNIIIRDLVP 348
Query: 477 DQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA-----RVCDGSGEAWI 531
+ WY AC T K+ T G+ Y C C + E R +++ D + A
Sbjct: 349 AEPWWYIACST-YKRGTAREGNAYKCPRCSTDAIETRYRVVIMGIDPSDLANDQAKAAEF 407
Query: 532 SIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQ 591
+ F E E++IG LN + S G + ++K + +++R SV++ + +R
Sbjct: 408 TFFGEIGEQLIGRPV--LNLVASVHGARDIVPPEIKAIFGRQYVIRTSVSR---GSLQRN 462
Query: 592 RVT 594
RV+
Sbjct: 463 RVS 465
>gi|413950982|gb|AFW83631.1| hypothetical protein ZEAMMB73_494259 [Zea mays]
Length = 489
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 40/274 (14%)
Query: 194 TSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF-YDRFQLG--KVYYISR 250
T + MR + A+ ++ + +E T ++ ++ E A F D+ + I
Sbjct: 77 TIRTKMRQTQTAKR-----SITIQNESCTPLEVVLWGEQATSFPADQISIAGQDSLQIII 131
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-L 309
+R AN+ +K V ND + + + +E + P+ ++ P D+L V+ E
Sbjct: 132 FVIRKANRMYKPVDNDIMIGFTKWTTIEALIEVPPAFPEIVYSLTPFDQLTTLVDIREYF 191
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
+D+IG V +S +IR K KR IT+ +E+ + V LW E AT+ A
Sbjct: 192 IDVIGAVTMISDVATIRTKMRQTQTAKRSITIQNESCTPLEVVLWGEQATSF------PA 245
Query: 370 DKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK-------------SWYES 416
D+ I SL++ F G TL RS + P ++K++ WYES
Sbjct: 246 DQISIAGQDSLQIIIFVG----TLARSYAGSRGNKPCSQKVEWLVTVTVLKIDQLWWYES 301
Query: 417 --------EGKGTSMASIGSGLGSLAKNGARSMY 442
+ G + SG G + RS Y
Sbjct: 302 CRKCLKKTKSHGDAYKCSDSGCGHVGPPNPRSPY 335
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
+D+IG V +S +IR K KR IT+ +E+ + V LW E AT+ A
Sbjct: 63 IDVIGAVTMISDVATIRTKMRQTQTAKRSITIQNESCTPLEVVLWGEQATSF------PA 116
Query: 370 DKSPIVAIKSLKVGDF 385
D+ I SL++ F
Sbjct: 117 DQISIAGQDSLQIIIF 132
>gi|242041191|ref|XP_002467990.1| hypothetical protein SORBIDRAFT_01g037710 [Sorghum bicolor]
gi|241921844|gb|EER94988.1| hypothetical protein SORBIDRAFT_01g037710 [Sorghum bicolor]
Length = 55
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 16/67 (23%)
Query: 347 RTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPE 406
+TV++SLW++LAT GQELLD D SP++A+KSLKV DFQ DLPE
Sbjct: 5 KTVSISLWDDLATTTGQELLDMVDSSPVIAMKSLKVSDFQ----------------DLPE 48
Query: 407 AKKLKSW 413
A+ LKSW
Sbjct: 49 AQNLKSW 55
>gi|357491997|ref|XP_003616287.1| Replication factor A protein [Medicago truncatula]
gi|355517622|gb|AES99245.1| Replication factor A protein [Medicago truncatula]
Length = 517
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 169/386 (43%), Gaps = 26/386 (6%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + H + + + W IKVRV + ++ + + L DE GT+I A++
Sbjct: 1 MEKLFHSVSEIALGEDGWKIKVRVLRLWEVPSFLKPDQTNSL-EMVLIDEMGTKIHASVR 59
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ F + GKVY +S ++ + ++T + Y++ ++V+ E A IP
Sbjct: 60 KQLFYVFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQAC--EGASIPS 117
Query: 290 TKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ I ++ ++ + + LVD++G + +S R + V K I +
Sbjct: 118 LGISLCKIADVCQHTSDHDYLVDVLGFMTGISVE---REYVRDGKVTKMVIFEITDASGK 174
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRST-VLVSPDLPE 406
+L+ + + + + + PI+ ++ KV F+ SL + +T +L++P + +
Sbjct: 175 CECALFGQYVDTLNKLMGKSGGGMPIILVQFAKVKIFRDKASLQNVMNTTRILINPPIEQ 234
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF-- 464
A +++ K + S+ + S+ + GARS S +L F
Sbjct: 235 ADQIR-------KSVTFGSM--DVSSVPRIGARSKVSLEEDFLRTFPKKTLEQLHSTFED 285
Query: 465 --FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
F + A I + + WY ACK C++ V+ G+ ++C+GC K+ + R+ + V
Sbjct: 286 GVFVVYATIGGLVDHEDWWYPACK-CHRSVSADSGA-FYCKGCAKHVFQMVPRFRVKVNV 343
Query: 523 CDGSGEAWISIFNEEAERIIG--CSA 546
D + +F+ + + ++ CS+
Sbjct: 344 SDATNVGVFVVFDGDMQNLLNTPCSS 369
>gi|321470011|gb|EFX80989.1| hypothetical protein DAPPUDRAFT_318086 [Daphnia pulex]
Length = 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 161/395 (40%), Gaps = 65/395 (16%)
Query: 161 NMAPAARLAMTRRVHPLVSLNPYQG---NWTIKVRVTSKGNMRTYKNARGEGCVFNVELT 217
N++ ++ + P+ L+ + NW IKVRVT K N + F + L
Sbjct: 12 NLSDGPSVSSQEKGFPISGLHYLKTDHQNWLIKVRVTKKTGKILVNNGISDVKYFKMNLI 71
Query: 218 DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV 277
D +I+A F + +F++ F++
Sbjct: 72 DLWKGEIEAMAFGDECDRFFEIFEV----------------------------------- 96
Query: 278 EEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKR 337
E +++ IP +F FVPI + G+ VD+I V +S KR
Sbjct: 97 -ECLDDDDSIPNAEFYFVPIKTISTMKPGS-FVDVIADASFVGKVSMGLSQSTQRHYTKR 154
Query: 338 DITVADE-TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGR 395
+ + D+ + ++ +++WN+L ++ Q D +A++ ++ +++G + L T+
Sbjct: 155 KLNLIDDVSGDSIVLTVWNDLVNDLNQHDY-FGDSVLRIAVRGAQIVEYKGKLELGTVST 213
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP 455
+ + ++ +L K + ++ G+ + +A I Y IT+
Sbjct: 214 TILKINEEL---KDIPGFFNIIGRRSQIAPI-----------FEKSYESYAICKDITTFQ 259
Query: 456 SLGDEK----PVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVT-DALGSGYWCEGCQKN 508
+ D K P +S++A IS+I + +Y C + C KKV + L + Y+C C
Sbjct: 260 EIKDLKTPYRPERYSVRAMISIIIKNSP-FYEGCYFEGCRKKVNFNLLTNNYYCSKCDAE 318
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG 543
+ E I+ ++ D SG ++ F E E ++G
Sbjct: 319 NPEFRWCLILKFQLNDISGSQRVTCFQEGFEDLVG 353
>gi|357503597|ref|XP_003622087.1| Replication factor A 51 kDa subunit [Medicago truncatula]
gi|355497102|gb|AES78305.1| Replication factor A 51 kDa subunit [Medicago truncatula]
Length = 466
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 149/332 (44%), Gaps = 38/332 (11%)
Query: 220 DGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE 279
D ++IQA++ ++ ++ D + G Y I + ++ ++FK + Y++ L ++
Sbjct: 7 DLSKIQASIKSKDFKQLGDSIEEGASYTIEKFLVQFNKEKFKPTNHKYKLTLIGST---- 62
Query: 280 AVNETAF--IPQTKFNFVPIDELGRYVNGTE---LVDIIGVVQNVSPTMSIRRKSNNEMV 334
+ +T++ I FNF + + GT+ L+D+IG V + ++ K +M
Sbjct: 63 IITKTSYDKISANLFNFTKFQHI---IGGTDKGVLMDVIGHVVGTTDIKDVQVKG--KMT 117
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL------KVGDFQGI 388
D+T+ D T+ +LW A + + N + PIV + L G GI
Sbjct: 118 KILDLTLEDLESNTIICTLWGHFAEQMNSYMSTNGNTFPIVVVMHLCRLNVYVFGGMYGI 177
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMY-----S 443
+ + + +L++P++ E K +G T AS+ G+ + + S+ +
Sbjct: 178 A-NAFNETKLLINPNIEECCNYK-----KGMKTGNASLTQGVTQMTAQSSLSLSNDLLQT 231
Query: 444 DRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCE 503
+++ IT +G + + A I I ++ Y +C C KKV + + + Y+CE
Sbjct: 232 KNMTILDITQAKQVGA-----YVVLAKIIGIDTNKKWCYVSCNKCFKKV-EPVCTKYFCE 285
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFN 535
C + + R+++ V D SG I +F+
Sbjct: 286 KCD-TLVDATKRFMVHIHVMDDSGSTTIVLFD 316
>gi|22857582|gb|AAN09856.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|31430721|gb|AAP52594.1| hypothetical protein LOC_Os10g11780 [Oryza sativa Japonica Group]
Length = 454
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H L+S L+ N I RV+ N + + + +F+ +L DE GT I A ++
Sbjct: 3 HVLISQLSFGDSNKRIHARVSRLWN---FTDLNDDTKIFHTDLVLLDEIGTSIHAQIYPP 59
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
K + KVYYI T+R AN+ ++ V N+ + ++ + +EE +N P
Sbjct: 60 ITEKMKPLLKEEKVYYIDSFTIRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPSIT 119
Query: 292 FNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
F+ P +++ V VDI+GV+ V +IR KS N KR + + D +
Sbjct: 120 FSLTPFEDVPSLVEKNSFYVDIMGVITEVGAVTTIRPKSRNAESLKRTLQIRDAS----- 174
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
GQ ++ +V V D++G+ L+ G S
Sbjct: 175 ----------AGQ------TQAQVVVFVGTLVKDYRGLGLTLTGSS 204
>gi|413934866|gb|AFW69417.1| hypothetical protein ZEAMMB73_473384 [Zea mays]
Length = 317
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 15/320 (4%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P N I+VR+ K R N G N+ L DE GT I A +
Sbjct: 5 PIAELDPKSTNAAIRVRIIRKWEFRGATN-DGPLRHVNLILADEQGTAIHAEIQAALVAD 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY + R + + +K V N + ++ + + P+ +
Sbjct: 64 KGSLIQIDKVYELKRFRVAPSRNYYKPVDNSMMIQFTLYTQAKLVQDPPPTFPRYAYKLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+ +G V N T L+D++G++ + + ++N + RDI + D + V+LW
Sbjct: 124 SFENIGNNVDNKTYLIDVLGILTEIGSLHHVGYNNSNII---RDIFLKDINNTSTKVTLW 180
Query: 355 NELATN--VGQELLDNADKSPIVAIKSLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLK 411
A++ V +N +K +V F+G + LS T +PD+PEA+
Sbjct: 181 GHQASSFSVDNNCDENDNKPVVVLFVGCLAKRFKGEAYLSATAACTWYFNPDIPEAQV-- 238
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
Y S+ T + I ++++ D+ + +P + ++ F
Sbjct: 239 --YYSKLVNTKLQMIRPEATEQEFQASQTLNIEDKTIEELLQLDPDMFPQQG--FKCTVT 294
Query: 471 ISLIKPDQAMWYRACKTCNK 490
IS + D W+ +C CNK
Sbjct: 295 ISRLVQDGRWWFPSCIKCNK 314
>gi|330798256|ref|XP_003287170.1| hypothetical protein DICPUDRAFT_94345 [Dictyostelium purpureum]
gi|325082822|gb|EGC36292.1| hypothetical protein DICPUDRAFT_94345 [Dictyostelium purpureum]
Length = 650
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 174/433 (40%), Gaps = 79/433 (18%)
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY-KNARGEGCVFNVELTDEDGT 222
P + + V + +N + TIK V + +++ K G +F+V L D G+
Sbjct: 191 PDSESVLRSHVSDIADINEHSKEITIKAMVMERMPRKSWNKGGDNSGELFSVILQDSTGS 250
Query: 223 QIQATMFNE------AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
I+AT F+ A Y+ + KV+ I + ANK F + +DYE+ N ++
Sbjct: 251 -IKATCFSSKSNPLPAFDDLYEMLEKKKVFKIQGFYAKKANKDFSRLPHDYEITFNASTA 309
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+ E ++F I++L GT D+IGVV + + K+N ++V K
Sbjct: 310 IVPVDEEMDIF----YDFRNIEDLSNVETGT-TCDVIGVVSDCNLNQRFTSKNNKQLV-K 363
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG-DFQGISLST--- 392
I + D T + V WNE A +D D I+AIK+ KV +F SLS
Sbjct: 364 SSININDTTG-IIEVIFWNEAAD------IDVKD-GDIIAIKNAKVNTNFNNKSLSASSY 415
Query: 393 -LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI 451
+ + + + L + + S Y G S++ S S+ V + I
Sbjct: 416 EINNNAIERTSQLRQLQASSSLY----TGQSISKGNSAYTSI-----------HVPIFVI 460
Query: 452 TSNPSLGDEKPVFFS--------------IKAYISLIKPDQA----------MWYRACKT 487
+ P ++ P+FF+ + ++S I P A +Y AC
Sbjct: 461 KTLP---EDSPIFFTKENNQNGGYKHQYRVVGHLSRIPPYVAPNDSGKKYLEWYYDACTK 517
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
C K + A + CE D Y M ++ D S I + ER++G + +
Sbjct: 518 CKK--SSASHNNQDCE-----DSAYEKNYKMQFKLSDESESIQIDVLGNTCERLLGVNPN 570
Query: 548 ELNELKSQLGDDN 560
+ E +G DN
Sbjct: 571 TMYEY---VGGDN 580
>gi|413943268|gb|AFW75917.1| hypothetical protein ZEAMMB73_045866 [Zea mays]
Length = 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 23/271 (8%)
Query: 287 IPQTKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
P+ + + +G V N T L+D++G++ + + ++N + RDI + D
Sbjct: 21 FPRYAYKLTSFENIGNNVDNKTYLIDVLGILTEIGSLYHVGYNNSNII---RDIFLKDIN 77
Query: 346 KRTVTVSLWNELATNVGQE-LLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVL 399
+ V+LW A++ + + D D PIV L VG F+G + LS T
Sbjct: 78 NTSTKVTLWGHQASSFSVDNICDENDNKPIVV---LFVGCLAKRFKGEAYLSATTACTWY 134
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLG 458
+PD+PEA+ Y ++ T + I ++++ D+ + +P +
Sbjct: 135 FNPDIPEAQV----YYNKLLNTKLQMIRPQATKKELQASQTLNIEDKTIEELLQLDPDMF 190
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIM 518
E+ F IS + D W+ +C CNK + +GY C C N E RY +
Sbjct: 191 PEQG--FKCTVIISRLVQDGRWWFPSCIKCNKSSSQT-STGYQCTLC--NGTETEFRYKL 245
Query: 519 VARVCDGSGEAWISIFNEEAERIIGCSADEL 549
DG+ EA F+ A+RI+G S L
Sbjct: 246 SFIATDGTSEAEFFCFDTIAKRIVGKSCQTL 276
>gi|108862225|gb|ABA96519.2| hypothetical protein LOC_Os12g06230 [Oryza sativa Japonica Group]
Length = 2279
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 153/408 (37%), Gaps = 61/408 (14%)
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED------------------------ 220
GN TI VRV+ + Y++ E V N+ L D
Sbjct: 1421 GNPTIIVRVS---RLWEYRDQNDETIVHNISLVLLDKKVPSRNSSANCYPYINVFSLSNS 1477
Query: 221 ----GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
G I A ++ F GKVY ++ +R ++ ++ V N +N + +
Sbjct: 1478 KSKQGASIAAYIYPPLDVVFGPIITEGKVYRLTFYRVRPCSRNYRPVNNRMSINFTKWTT 1537
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVP 335
+EE ++ A P ++ P +EL +V+ + D+IGV+ VS +I+ + +
Sbjct: 1538 LEEHLDVPADFPCYAYSPTPYNELRSHVDRKDSFTDVIGVITEVSSVTTIQTRIKDGDSL 1597
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQE-LLDNADKSPIVAI-------KSLKVGDFQG 387
KR + + + + ++LW E AT+ ++ ++ +K P VAI ++
Sbjct: 1598 KRSVCIRNADNVIINIALWGERATSFPEDAIISAGEKEPQVAIFVGTLVRGYVRNASLGN 1657
Query: 388 ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVS 447
+SLS ++ D PE K +G + I + ++ + +
Sbjct: 1658 VSLSGNSACKWYINIDTPEVNSFKD--SIKGNYEPIQFIDIPVPNVIVGAEQKTVAQLKE 1715
Query: 448 LTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQK 507
L K F + I + WY AC C KK G Y C
Sbjct: 1716 LHPFKF-------KKHEFQVTVVIKKFCMQASWWYTACDIC-KKTAKPYGRAYRC----- 1762
Query: 508 NDEEC------SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
D C S R+ + D + E +F A+R+IG S D L
Sbjct: 1763 GDPTCPPIVSASPRFKLNIIAGDETAETTFILFGRLAQRLIGRSVDTL 1810
>gi|414888073|tpg|DAA64087.1| TPA: hypothetical protein ZEAMMB73_996720 [Zea mays]
Length = 483
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 156/382 (40%), Gaps = 34/382 (8%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAA 233
PL +L N ++++V K R A G + +++ LTD G I + + A
Sbjct: 5 PLSALTLQDRNAEVQIQVHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
D FQ+GK+Y ++R ++ A +K V D + + + +E + P ++
Sbjct: 62 ATRGDEFQVGKIYKMTRFSVARAKSTYKPVDGDLMLYVKPYTTLELCHTSPSGFPLYVYH 121
Query: 294 FVPIDELGR-YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK---RDITVADETKRTV 349
D++ N D++G++ +S + N +P R + + + + +
Sbjct: 122 LTSYDKIDPDGSNARNFHDVLGIITEISAIKPV----GNAHIPSSYNRHVLIKNLSDDIL 177
Query: 350 TVSLWNELATNVG-QELLDNADKSPIVAIKSLKVG----DFQG-ISLSTLGRSTVLVSPD 403
++LW + A D ++PIV L VG ++QG + LS +P
Sbjct: 178 KITLWGKRAQEFSLTNTYDPQKQTPIVV---LFVGCLPKEYQGEVLLSGGAACHWYFNPS 234
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEKP 462
+ EA+ S ESE + S+ + R + +L +I S NP D
Sbjct: 235 IEEAEAFYSRIESEKINIELPSLDKQEITPPSFPQREHH----NLKYILSLNPH--DVPD 288
Query: 463 VFFSIKAYISLIKPDQAMWYRACKTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
+ I+ I + +Y AC TC NK D + C C+ + RY + +
Sbjct: 289 QGYECTVTITCIPEGKTWYYIACNTCPNKPSIDPVIRQ--CSTCRSTNY--CFRYKLTFK 344
Query: 522 VCDGSGEAWISIFNEEAERIIG 543
DG+ EA + F+ A IIG
Sbjct: 345 ASDGTEEAEMFAFDNVARTIIG 366
>gi|391338168|ref|XP_003743433.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 301
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 122/245 (49%), Gaps = 14/245 (5%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
++V L L P + + R+ SKG +RT+K +G +F+ ++D IQA + +
Sbjct: 53 KKVKSLGDLTPGKIGGIVNGRIESKGTIRTWKKDNEQGQLFSFVMSD-GSADIQAVVSGD 111
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
+++DR +G+ Y I+ ++ N + + E++L + S++ + + IP++
Sbjct: 112 MCTEYHDRITVGQCYQITAFKVKETNPAYNPTNHPCELHLTKISKMVPI--QGSHIPKSI 169
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIR-RKSNNEMVPKRDITVADETKRTVT 350
+ + E+ + + ++V++ +V V SI R M K+ + + DET + ++
Sbjct: 170 VSRTTLAEIAKQ-DANKVVNVEAIVYEVGKPQSISCRDGITRM--KQSVLLVDETLKIIS 226
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKK 409
+ LW E QEL + +S V +++L+V ++ G L+++ + V P AK
Sbjct: 227 LGLWAEAV----QEL--DGMESNCVLVRNLQVKEYAGKKQLNSMSGTVVDKEPASETAKS 280
Query: 410 LKSWY 414
++ W+
Sbjct: 281 MRLWW 285
>gi|242048790|ref|XP_002462141.1| hypothetical protein SORBIDRAFT_02g020420 [Sorghum bicolor]
gi|241925518|gb|EER98662.1| hypothetical protein SORBIDRAFT_02g020420 [Sorghum bicolor]
Length = 770
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 15/258 (5%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L ++P + NWTIKVRV + + +G + L DE G I A + ++ KF
Sbjct: 236 LSKIDPTRHNWTIKVRVARMWKLSSTPKWKGV-TAMELVLVDEQGMGITACVGHKDLTKF 294
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAF-IPQTKFNFV 295
D G+ Y I + + +++ V N + + +EE + + +P+ FNFV
Sbjct: 295 ADALVEGRSYVIKKFQVSRHPRKYNPVPNPQTIYFTPWTAIEEIPTKLSTQLPRNVFNFV 354
Query: 296 PIDELG-RYVNGTELVD--IIGVVQNVSPTMSI-----RRKSNNEMVPKRDITVADETKR 347
+ELG R N LV + G++ +V +++ R N + +R + + D + R
Sbjct: 355 DFEELGQRRRNEHGLVGDVVFGLLPDVIGQLTVIHLLLRSNGLNGVTVRRVLELRDLSDR 414
Query: 348 TVTVSLWNELATNV-GQELLDN-ADKSPIVAI-KSLKVGDFQG-ISLSTLGRSTVLVSPD 403
+ ++LW E AT+ G+ L + A PIV + ++V + G + ++ G + ++ D
Sbjct: 415 LLHITLWGEHATSFEGESLTETIAKDEPIVMVFAGVQVKQYLGSTTCASGGGTKWYMNID 474
Query: 404 LPEAKKLKSWYESEGKGT 421
L E ++ Y +G+G+
Sbjct: 475 LAEMNAFRARY-LQGRGS 491
>gi|348670089|gb|EGZ09911.1| hypothetical protein PHYSODRAFT_305275 [Phytophthora sojae]
Length = 441
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 33/242 (13%)
Query: 175 HPLVSLNPYQG-NWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
HP+ L+P G W + R+ +R + NA G G L DG
Sbjct: 4 HPIRDLSPVLGVQWEVVARIAFLSPVRQWSNANGRGHNLATILRG-DG------------ 50
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
V+ + G +R A + F + YE+ L+ ++ V V + I +
Sbjct: 51 -----------VFLFAGGRIRKAARGFGKPNHTYEIGLSSSASV-TPVEDDDSIEHVDYA 98
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
F I +L + + VDI+ ++ +V + + + V KR++ + D + + +L
Sbjct: 99 FTTISDLA-HADAHAQVDILAMIMDVGVLDKVVDRKDGVQV-KRELKLTDSSNVEIVCTL 156
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
WN+ A E+ A A + + V +F+G SLSTL + V+ +P+LP+ L+ W
Sbjct: 157 WNKFA-----EVDYTAALHQPYAFRQVMVNEFRGRSLSTLSYTMVVPNPNLPDVITLQEW 211
Query: 414 YE 415
++
Sbjct: 212 FD 213
>gi|242051188|ref|XP_002463338.1| hypothetical protein SORBIDRAFT_02g042013 [Sorghum bicolor]
gi|241926715|gb|EER99859.1| hypothetical protein SORBIDRAFT_02g042013 [Sorghum bicolor]
Length = 520
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 155/386 (40%), Gaps = 24/386 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L + P Q +WTI V ++ R K+ G+ ++ + D+ GT + + ++
Sbjct: 9 LSDIRPGQFHWTICVSISRMWEFRG-KSDDGDIKHLDLVIIDKKGTSMYVEIPPDSIPIL 67
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVP 296
+ + GK+ + + + A +++ V N Y + LN+ + + E + P+ + P
Sbjct: 68 KPQLKEGKIVVMKKFVVEQAKPEYRVVPNPYMLRLNKRTMITTVEPEPSMFPKVTYMLTP 127
Query: 297 IDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
+ EL +Y TE +D+IG + VS + + M +R IT+ D + + L
Sbjct: 128 LSELEQYKGSTERFLDVIGQITQVSDIANFHTVAGT-MQMRRKITLRDINGVAINLFLSG 186
Query: 356 ELATNV-GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWY 414
A G ++ + ++ +VAI F G TL + + P WY
Sbjct: 187 ARAMEFDGDKVYNLGQETAVVAI-------FVG----TLMKKGLADQPSYLSGTSACRWY 235
Query: 415 ESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL-THITSNP--SLGDEKP-----VFFS 466
++ + ++ + L S + S+ ++ H+ L D P F
Sbjct: 236 INDFQIPAIQEYYNMLPSEVDAVDKVEISETKTMQQHVQQKTVLQLKDMDPFEQTNTKFQ 295
Query: 467 IKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
I+ + +Q +Y ACK CN + + Y C E RY + D +
Sbjct: 296 CTVTITKLSLNQGWYYSACKICNTRCY-YINGRYKCAKTDCPSNEAQDRYKLCFMAADET 354
Query: 527 GEAWISIFNEEAERIIGCSADELNEL 552
E F+++A+++IG L +
Sbjct: 355 YELEFIAFDQKAQQLIGKPIQRLQSM 380
>gi|226507178|ref|NP_001143203.1| uncharacterized protein LOC100275706 [Zea mays]
gi|195615746|gb|ACG29703.1| hypothetical protein [Zea mays]
Length = 422
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 17/268 (6%)
Query: 287 IPQTKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
P+ + + +G V N T L+D++G++ + + ++N + RDI + D
Sbjct: 21 FPRYAYKLTSFENIGNNVDNKTYLIDVLGILTEIGSLHHVGYNNSNII---RDIFLKDIN 77
Query: 346 KRTVTVSLWNELATN--VGQELLDNADKSPIVAIKSLKVGDFQGIS-LSTLGRSTVLVSP 402
+ V+LW A++ V +N +K +V F+G + LS T +P
Sbjct: 78 NTSTKVTLWGHQASSFSVDNNCDENDNKPVVVLFVGCLAKRFKGEAYLSATTACTWYFNP 137
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM-YSDRVSLTHITSNPSLGDEK 461
D+PEA+ Y S+ T + I ++++ D+ + +P + ++
Sbjct: 138 DIPEAQV----YYSKLLNTKLQMIRPQATEQEFQASQTLNIEDKTIEELLQLDPDMFPQQ 193
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
F IS + D W+ +C CNK + +GY C C N E RY +
Sbjct: 194 G--FKCTVTISRLVQDGRWWFPSCIKCNKSSSQT-STGYQCTSC--NGTETEFRYKLSFI 248
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADEL 549
DG+ EA F+ A+RI+G S L
Sbjct: 249 ATDGTSEAEFFCFDTIAKRIVGKSCQTL 276
>gi|115477364|ref|NP_001062278.1| Os08g0522100 [Oryza sativa Japonica Group]
gi|113624247|dbj|BAF24192.1| Os08g0522100 [Oryza sativa Japonica Group]
Length = 1578
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 144/346 (41%), Gaps = 20/346 (5%)
Query: 211 VFNVE--LTDEDGTQIQATMFNEAARKFYDRFQLGKVY-YISRGTLRVANKQFKTVQNDY 267
+FN++ + DE+GT +Q T+ + +F LG VY ++ T+ + NK++ Y
Sbjct: 858 IFNIDGVILDEEGTMVQFTIPKKLENEFRPSLTLGCVYMFVDVNTVDIKNKKYIYHHQKY 917
Query: 268 EMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIR 326
+ +++V + + IP F F P D++ + L+D+IGV+ +V P
Sbjct: 918 MLQFKSSTKVHHLESRGSSIPNYGFEFCPFDQIPSKSGISKPLIDLIGVISHVGPYDYAG 977
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL--DNADKSPIVAI-KSLKVG 383
+ S+ + R + + + ++ + LW E + + + + D +VAI L G
Sbjct: 978 KTSSKK---NRKLKIRSKDEQEQEIVLWGEYGGSFDEAFVLQKSTDHKIVVAILAGLTAG 1034
Query: 384 DFQGISLSTLGRST-VLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMY 442
+ G + +T +T + D+ E + +S Y+ + + ++ + +
Sbjct: 1035 TYLGKTEATSSSATQIYFDSDITEIAEYQSSYQWD-----IPTLQQQMPRVEHLTPLQAA 1089
Query: 443 SDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC 502
L I+ P E +S A +S I P +Y+ CK+C T + S
Sbjct: 1090 GKLYKLEEISRLPISAFEGGNSYSCIAKVSAIVPYTNWYYKICKSC----TASYNSNSDT 1145
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
CQ Y + + D SG F AE ++ +A +
Sbjct: 1146 PRCQCQHSMPKPMYKLPLTIKDESGTLDAVAFYNVAEDLVEVNATQ 1191
>gi|413922380|gb|AFW62312.1| hypothetical protein ZEAMMB73_585961 [Zea mays]
Length = 482
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 132/328 (40%), Gaps = 23/328 (7%)
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT 290
EA R Q K+ + + + A FK V Y + L+ + +EE + P+
Sbjct: 8 EAIYTLQPRLQESKILIMRKIYVDNAKLSFKPVHGKYMIRLHPKTLLEEVNEDPQDFPKY 67
Query: 291 KFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
F+ P EL + E +D+IG + +S + S + KR I + D +
Sbjct: 68 TFHLTPFPELPQLEGNNEYFIDVIGCITALSDATPFQTSSGIVRM-KRLIHLVDLRGNKI 126
Query: 350 TVSLWNELATNV-GQELLDNADKSPIVAI-KSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
VSLW A GQ++ ++ + ++ I V ++G G + +LPE
Sbjct: 127 EVSLWGRRAEEFPGQQVFKASEMNHVIVIFVGTSVKSYRGSPPFLSGTAACRWYINLPEI 186
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM------YSDRVSLTHITSNPSLGDEK 461
++ ++Y ASIG S+ K ++M + L +P D+
Sbjct: 187 HEINTFY---------ASIGEQYQSIQKLHIQTMNEMQNKIEQKTFLEMKLVDPF--DDM 235
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
F ++ I ++ +Y+ C CN T G Y C+ + + RY +
Sbjct: 236 SKRFECTMIVTRIADNKPWFYQGCTKCNTS-TRYEGKTYICKQGHISSQMVH-RYKISLY 293
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADEL 549
DG+ E +F+E A +IG + ++L
Sbjct: 294 ATDGTYELEFVLFDERATSLIGKTVEKL 321
>gi|241617732|ref|XP_002408205.1| replication factor A 1, rfa1, putative [Ixodes scapularis]
gi|215502936|gb|EEC12430.1| replication factor A 1, rfa1, putative [Ixodes scapularis]
Length = 347
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM 441
+G G+SLS +G S + V+PD+PE+ L WY +EG S+ G A
Sbjct: 179 LGLGSGVSLSMIGSSQLQVNPDIPESHALIGWYSNEGASLQTQSLSVRTGGFEGAAA--- 235
Query: 442 YSDRVSLTHITSNPS----LGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDA 495
S H++ S GD KP +FS KA +++++ + + Y+AC + CNKK+ +
Sbjct: 236 -----SWKHLSEAKSQKLGFGD-KPDYFSCKASVAIVRKENCL-YKACPAEKCNKKLVNL 288
Query: 496 LGSGYWCEGCQKNDEECSLRYIM 518
Y CE C + E R I+
Sbjct: 289 ENGLYRCEKCNEQTSEFKWRLIV 311
>gi|414868216|tpg|DAA46773.1| TPA: hypothetical protein ZEAMMB73_923308 [Zea mays]
Length = 469
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
E ++YIMV +V D +GEAW+S+FNE AE+IIGCSADEL+ ++ ++ D + +K V
Sbjct: 217 ENMRVKYIMVIKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEVHDVSHPLLKSLGV 276
Query: 570 TWVPHLLRVSVAQQE 584
+P ++ +V +E
Sbjct: 277 KNLPTVIGRTVNGEE 291
>gi|402225049|gb|EJU05111.1| hypothetical protein DACRYDRAFT_98791 [Dacryopinax sp. DJM-731 SS1]
Length = 504
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 18/230 (7%)
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
R++ K + Y G+G V N+ D G +I A FN +A + + + G+VY I
Sbjct: 101 RLSGKDTVHAYNTQNGKGRVHNLTFHDSMG-KIGAVAFN-SATEVTNSLESGQVYSICNA 158
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
T+ +A + + +++ ++ N+E E N +P + VP ++ + ++ D
Sbjct: 159 TVCIAKAAYNKTLSLFQLTISMNTEFELVQNFD--LPIHYLDIVPFAKIAD-MGSDDICD 215
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPK-----RDITVADETKRTVTVSLWNELATNVGQELL 366
I +V V + + S++E++ K R I + D++ + + W EL E+
Sbjct: 216 IHAIVVTVGAGICC-KPSHSELLAKEVTYFRKIHIVDQSSVMLCLCTWQELG-----EVF 269
Query: 367 DNADKSPIVAIKSLKVGDFQGISLSTLGRST-VLVSPDLPEAKKLKSWYE 415
N + V+I +L+ G SL T G+ T + + D P+ + L+ WYE
Sbjct: 270 KNHEGEA-VSINNLQWDYHDGPSLVTAGKCTHIHFNDDDPDHQALQLWYE 318
>gi|77550798|gb|ABA93595.1| hypothetical protein LOC_Os11g28660 [Oryza sativa Japonica Group]
Length = 786
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 14/237 (5%)
Query: 310 VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA 369
VD++GV+ V +R KS N KR I + D + T+ V+LW + A + + NA
Sbjct: 341 VDVMGVITEVGAPAIVRPKSRNTDSLKRTIQICDASNSTLPVTLWGDKAAIFDADTIYNA 400
Query: 370 DKS--PIVAIKSLKVGDFQGISLSTLGRSTV--LVSPDLPEAKKLKSWYESEGKGTSMAS 425
++ ++ + V D+ G+ L G S ++ D+PE +LK + + + +
Sbjct: 401 GQTQPQVIVFVGMLVKDYPGLGLIVTGSSPCQWYLNLDIPEVLELKESFSANFRAIAW-- 458
Query: 426 IGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC 485
+ + A + + ++ L + NP + F + + I + + WY +C
Sbjct: 459 ----VDNPATGYNQDIAEEKKILEILALNPH--KNRSTRFIVTVTVKKICTENSWWYNSC 512
Query: 486 KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
+ C + + GS Y C GC N RY +V D S +A +F A R+I
Sbjct: 513 RMC-YRTSRPYGSTYKCSGC-SNIGIPDPRYKVVLIAGDDSCDATFILFGRIAHRLI 567
>gi|297725599|ref|NP_001175163.1| Os07g0418100 [Oryza sativa Japonica Group]
gi|255677702|dbj|BAH93891.1| Os07g0418100 [Oryza sativa Japonica Group]
Length = 2266
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 153/382 (40%), Gaps = 65/382 (17%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAAR 234
+ SL P GN T+++R++ + Y++ E + + L D+ G+ I A ++
Sbjct: 1440 IASLEPGDGNPTLRIRIS---RLWEYRDQNDESILHYIGLVLVDQKGSSIAAMIYPPCDN 1496
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
KF GKVY ++ ++ K ++ V N + S VEE V+ Q ++
Sbjct: 1497 KFKPLITEGKVYLLTYYRVKPCTKHYRPVDNKLAITFTWWSTVEECVDVPDNFAQYAYSL 1556
Query: 295 VPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
P +EL +V+ + D+IG++ +S +++ + + KR++ + R + L
Sbjct: 1557 KPFNELRSHVDRKDSFTDVIGIITEISSVTTVQTRIKDGDSLKRNVYI-----RNAELDL 1611
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
+ + T + Q +L + + G ++ I L P P A
Sbjct: 1612 FPKFETFLCQIILYSVE------------GSYEPIKWLDL--------PSGPAA------ 1645
Query: 414 YESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISL 473
+ G+ ++A I R ++ + + + + L +K F + I
Sbjct: 1646 -HNNGEEKTIAEI------------RELHPFKFKV--VLTVTILWKQKHEFL-VTVVIKK 1689
Query: 474 IKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEEC------SLRYIMVARVCDGSG 527
+ + + WY AC C KK GS Y C + C S + + D +
Sbjct: 1690 LNMEYSWWYTACDIC-KKTAKPYGSSYRC-----GNNTCPPVVSASPWFKLSVIAGDHTA 1743
Query: 528 EAWISIFNEEAERIIGCSADEL 549
+ +F A+R+IG S D L
Sbjct: 1744 DTTFIVFGRLAQRLIGRSVDAL 1765
>gi|301071243|gb|ADK55677.1| RPA1-like protein 1 [Tetrahymena thermophila]
Length = 505
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 169/426 (39%), Gaps = 86/426 (20%)
Query: 187 WTIKVRVTSKGNMR-TYKNARGEGCVFNVELTDEDGTQIQATMFN-EAARKFYDRFQLGK 244
+ + +V SKG+++ TY++ F +E+ D FN + +Y++ +LGK
Sbjct: 19 FIVTAKVISKGSIKYTYQDKS-----FKIEIYDGSLEHSTLVYFNCQDIENYYEQIELGK 73
Query: 245 VYYISRGTL-RVANKQFKTVQNDYEMNLNENSEV--EEAVNETAFIPQTKFNFVPIDELG 301
VY SR + + A K+ YEM ++ ++ +E++N +K+ + I+++
Sbjct: 74 VYKFSRAIIAKDAQKKEARKCLKYEMFNSQYIQLVEDESINLIYAADFSKYELIKINQIS 133
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
+ T+ DI+GVV P+ + S + + DET+ T+ VS+ NE N+
Sbjct: 134 E-QHQTDHFDILGVVME-EPSKERVKDSEGRELDTIKFLIGDETRHTLQVSIRNEYGLNL 191
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE------ 415
++ D +V IKS V + S S +LV+PD+ +A L +E
Sbjct: 192 NLKIFD------VVLIKSTHVNVYAN-QKSVDSGSGILVNPDIQQALDLLYSFEKIIQED 244
Query: 416 -----------------------------------SEGKGTSMASIGSGLGSLAKNGARS 440
K IG SL +S
Sbjct: 245 EEDIDYKKDNQLDNSFLTDGKEECKSNELNKQRALKSNKNKEFTQIGENKVSLHFYDVKS 304
Query: 441 M------YSD------RVSLTHITSNPSLGDE--KPVFFSIKAYISLIKPDQAMWYRACK 486
+ D R+SLTH T +P+ E K ++ I+ I ++ +Y AC
Sbjct: 305 INYVVQQVEDQLERVIRLSLTHSTQDPAFIKEFTKCIYSEIEGEIYSAGIEKKPFYVACS 364
Query: 487 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA-----RVCDGSGEAWISIFNEEAERI 541
C KK+ + QK ++C+ I+ + D +G FNE+ E I
Sbjct: 365 VCKKKIENY-------PVIQKCFKKCAGATIIAKMATNLNIADATGALSALAFNEQCEEI 417
Query: 542 IGCSAD 547
G A+
Sbjct: 418 FGFDAE 423
>gi|385305381|gb|EIF49362.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 100
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 132 KKDGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAA---RLAMTRRVHPLVSLNPYQGNWT 188
K PG+V ++ ++ + N AP++ + A ++ + L+PYQ NWT
Sbjct: 12 KSXSPGVV-----------SSTSVKSEXKNXAPSSSRPKKAEPDNLYSIDQLSPYQNNWT 60
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
IK RV+ K +MRT+ N RGEG +FNV DE G +I+AT F
Sbjct: 61 IKARVSYKSDMRTWSNQRGEGKLFNVNFLDETG-EIRATGF 100
>gi|300120593|emb|CBK20147.2| unnamed protein product [Blastocystis hominis]
Length = 182
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC-------KTCNKKVTDALG 497
R +L+ I EKP + ++K + I D+++ Y AC + C KK+ +
Sbjct: 4 RKTLSAIQDEQLGFKEKPDYLTVKVMVRSIPHDRSVVYPACPNVKEDGRKCQKKLIQGV- 62
Query: 498 SGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLG 557
G+ CE C + E RYI V D SG ++ +FN+E ER A +NEL+
Sbjct: 63 DGWSCESCNRVVEAPEYRYIFNMEVMDYSGSQYVQLFNDEGERFFEIPAGRMNELEK--S 120
Query: 558 DDNSYQMKLKEVTWVPHL--LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 606
+ Y+ K + ++ LRV V Q + R R TV PVD E
Sbjct: 121 NSEEYEKVFKNRLFKEYIMTLRVKVDQ---SMTSRVRCTVYRFDPVDVDKE 168
>gi|52076459|dbj|BAD45339.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 457
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 13/263 (4%)
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ-NDYEMNLNENSEVEEAVNETAFIPQTK 291
A++F G VY IS A ++ Q +Y + ++ ++ + IP+
Sbjct: 60 AKQFRPLLNKGSVYLISNTVAIDAKRKTNIYQCQNYILQFKHDTRIQPLESRGLTIPKFF 119
Query: 292 FNFVPIDE-LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
F+F P DE LG+ ++ L+D+IGV+ + P + S+ ++ R I + + ++T
Sbjct: 120 FDFCPFDEVLGKNISSKPLIDLIGVISYIGPYDFVSPTSDKKL---RRIKIQNLEEQTQD 176
Query: 351 VSLWNELATNVGQELLDNADKSPIVA--IKSLKVGDFQGISLSTLGRST-VLVSPDLPEA 407
V LW + + ++ + K IV L G F I+ ++ +T + + D P+
Sbjct: 177 VLLWGQYGESFNEDATLHKSKDEIVVAIFAGLTAGKFSAITEASSSSATEIYIDLDTPQV 236
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
++ ++ Y+ E + T + + A MY +L+ I++ P + +S
Sbjct: 237 REFRTSYQWE-RPTLEQQLPKVIRLTPIQAAGKMY----TLSEISAMPISAFQGGATYST 291
Query: 468 KAYISLIKPDQAMWYRACKTCNK 490
A I+ I +Y C C+K
Sbjct: 292 TAKITAILSSIKWYYIGCHRCDK 314
>gi|414869783|tpg|DAA48340.1| TPA: hypothetical protein ZEAMMB73_848257 [Zea mays]
Length = 288
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 14/236 (5%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFY 237
L P + IKV V+ K ++ A G + +++L D++G I A + A +
Sbjct: 9 LVPQNRHAVIKVYVSRKW---IFRGAMDNGPIHHIDLVLIDKEGNGISAEIPGNLAEEKG 65
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ ++Y ISR T+ A + FK V D ++ ++ ++ +++ + P+ ++ P+
Sbjct: 66 SIIKENEIYEISRFTISSARQMFKPVHIDKMIHFTYHTIIKASLDSPSTFPRYVYHLTPL 125
Query: 298 DELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
++ Y+ E +D++GV+ VS +R ++ ++I + D T+ ++LW E
Sbjct: 126 HQIESYIQKNEYFLDVLGVITQVSALKPVRTQTQESSNVIKEIIIKDINDVTMRLTLWAE 185
Query: 357 LATNVG-QELLDNADKSPIVAIKSLKVG----DFQGISLSTLGRSTVLVSPDLPEA 407
A ++ + ++ PIV +L VG +FQG L+ +PD+ EA
Sbjct: 186 RAKAFKLDDVYNPLEQKPIV---TLFVGCLAKNFQGAYLNGGTTCRWYFNPDIKEA 238
>gi|194764877|ref|XP_001964554.1| GF19997 [Drosophila ananassae]
gi|190614826|gb|EDV30350.1| GF19997 [Drosophila ananassae]
Length = 265
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 23/243 (9%)
Query: 181 NPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRF 240
+P+ I RV K + +Y+N G +F + L DE G +I AT+ NE F+ +
Sbjct: 34 HPWDSTSFIIARVVHKTEITSYENETS-GNIFLIYLRDESG-EIIATVHNELCNTFFKQI 91
Query: 241 QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIPQTKFNFVP 296
+ +V + + + A K++ + + + +N ++++V N TA IP ++N P
Sbjct: 92 ETDQVCFFADFEVNWATKKYVLMPHSFNINFTQSTKVLPIGSLNQNITA-IPGIRYNLQP 150
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
I+ + + +G E VD IG+ V K + + ++ D+ +T++LWN+
Sbjct: 151 IEVIHKMCDG-EPVDTIGICGKVDELA----KRGGYYIREIELMDYDDYDGVITLNLWND 205
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQ---GISLSTLGRSTVLVSPDLPEAKKLKSW 413
A N + + I+ +K +V + I+ S + ++P++ EAK L+ W
Sbjct: 206 AAINF------DGKEDDIILVKGARVREHNLKNKINFDWF--SKMEINPNIKEAKSLREW 257
Query: 414 YES 416
E+
Sbjct: 258 LEN 260
>gi|391328094|ref|XP_003738527.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 319
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
I+ RV SK ++++ G +FN L + G ++ + AA +D+ +G Y +
Sbjct: 78 IQGRVKSKTLVKSWSKGNANGKIFNFVLRNTSG-EMNIIVSGNAADDIFDKIAVGNCYKV 136
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDEL-GRYVNGT 307
+ ++ A +Q++ +D E+ L + S + E E +P+ + + + E+ + VN T
Sbjct: 137 NAFKVKSAYQQYRVTGHDCELQLTKLSRIIEITGED--LPKIQASITTLAEIIFKPVNAT 194
Query: 308 ELVDIIGVVQNVSP--TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
VDI+ V+ +V P T + R +N E K+ + V D+T + V + LW+E VG+
Sbjct: 195 --VDILAVIFDVRPPQTFNCRDGTNTE---KQTVLVVDDTMKMVEIGLWSEF---VGK-- 244
Query: 366 LDNADKSPIVAIKSLKVGDF 385
LDN + +V +++L+V DF
Sbjct: 245 LDNKEGEAVV-LQNLQVRDF 263
>gi|115436702|ref|NP_001043109.1| Os01g0390300 [Oryza sativa Japonica Group]
gi|55297220|dbj|BAD68984.1| DNA binding protein-like [Oryza sativa Japonica Group]
gi|113532640|dbj|BAF05023.1| Os01g0390300 [Oryza sativa Japonica Group]
gi|215736912|dbj|BAG95841.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767124|dbj|BAG99352.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVY 246
IK RV+ + + Y + E +++ +L DE G I ++ A K Q GKVY
Sbjct: 18 IKARVSRQWD---YHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPAMIKLRTLLQEGKVY 74
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
Y ++R AN+ ++ V N ++ + + +EE ++ P F+ P + V+
Sbjct: 75 YFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITFSLTPFQDAPSLVDR 134
Query: 307 TEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADET 345
VDI+GV+ + T ++R KS N KR + + D +
Sbjct: 135 NAFYVDIMGVITEIGATDTLRPKSRNTETLKRTMQIWDAS 174
>gi|300681310|emb|CAZ96018.1| conserved hypothetical protein [Saccharum hybrid cultivar]
Length = 508
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 160/420 (38%), Gaps = 74/420 (17%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
I VRV K T+ ++ G+G V L D G + A + ++ + F +GKVY
Sbjct: 19 ITVRVIRKW---THHDSSGQGVPLYVGMVLADAQGHAMYAEIADDLIGEKACLFDVGKVY 75
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 306
+ + + A K ++ V + +N+++++ V+ N + IP+ + P+ +
Sbjct: 76 VLKKFVVNNAKKSYRAVDRNLLINISQHTTVQVVPNPPSSIPEYIYRITPLPAIKPVRFV 135
Query: 307 TELVDIIGVVQNVSPTMSIRRKSNNEMVPK--------RDITVADETKRTVTVSLWNELA 358
D IG + I+ K+ + VPK R+I + D + + V+LW + A
Sbjct: 136 YNYTDTIGYL--------IKYKAAHTFVPKNKEKAKTLREIYIKDLSDNVMQVTLWGDQA 187
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
T G + D D+ I L VG + L + + SP
Sbjct: 188 T--GFNISDIYDREAGNLIVCLIVGCYPREDLMNNNKPCLSGSP---------------- 229
Query: 419 KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQ 478
A S Y NP++ +E P F + I
Sbjct: 230 -------------------ACSCY----------LNPNIPEE-PGPFKCAVTVVCITNTS 259
Query: 479 AMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEA 538
+ WY AC+ C KK + Y C C + + RY++ D + EA +++EA
Sbjct: 260 SWWYMACRPCKKKADQQIDGSYSCPKCGGYNT--APRYLLHFIGKDDTSEASFLAYDDEA 317
Query: 539 ERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
++I E + + L +L+ + ++L V + + K + V+AV
Sbjct: 318 YQMI---QKECEAVVNPLHKREGLPQQLQSIMNKTYILSVDLTDESCQTTKIREYQVKAV 374
>gi|4006824|gb|AAC95166.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 456
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 151/368 (41%), Gaps = 34/368 (9%)
Query: 200 RTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
R Y GE + L D+ G ++ A + E +KF G I+ TL + Q
Sbjct: 5 RQYSVKAGES--IKMILVDKAGDKMYAAVRREQIKKFERCVTEGVWKIITTITLNPTSDQ 62
Query: 260 FKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQ 317
++ Y++ + V + V+++ F+ KF+ + L N L D++G V
Sbjct: 63 YRISDLKYKIGFVFKTTVSPCDTVSDSLFLSLAKFDVI----LSGSTNSNILHDVMGQVI 118
Query: 318 NVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAI 377
+ S + +NN+ K D + D+ + LW + A V + ++ D + I
Sbjct: 119 DRSEIQDL--NANNKPTKKIDFHLRDQHDTRLACILWGKYAEIVDKACQESTDGIVVCLI 176
Query: 378 KSLKV---GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL- 433
+ K+ D + +S + S V V P L E K ++ G ++ S GS L
Sbjct: 177 RFAKINLYNDTRSVS-NFFDVSQVFVDPTLAELDLFKQSIPTD--GLTLGSSGSFHKRLY 233
Query: 434 -AKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV 492
+ G R ++ + ++ +G K V +S I D +Y C+ NKKV
Sbjct: 234 APRTGDDDGDYPRQTIKEVLTSSDVGKCKTV-----CTVSAIDTDWPCYYFCCRAHNKKV 288
Query: 493 T--DAL---------GSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERI 541
+A+ +WCE C + ++ + + D + EA +F+ A+ I
Sbjct: 289 VKEEAIKLEDVKQPQKPRFWCEICNGFAKSVVAKFCLHLHIMDQTDEARCMLFDSHAKEI 348
Query: 542 IGCSADEL 549
+G +A +L
Sbjct: 349 LGTTAPQL 356
>gi|242047974|ref|XP_002461733.1| hypothetical protein SORBIDRAFT_02g007190 [Sorghum bicolor]
gi|241925110|gb|EER98254.1| hypothetical protein SORBIDRAFT_02g007190 [Sorghum bicolor]
Length = 735
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 158/390 (40%), Gaps = 38/390 (9%)
Query: 168 LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQAT 227
L M + PL L P + I VRV+ R K+ + F++ + D+ G +
Sbjct: 232 LTMQGKRTPLSELRPMNTMYNIHVRVSRTWEYRG-KSEKNPLIHFDMVVIDQKGYAMYCE 290
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA-VNETAF 286
+ E + GKV YI + + A ++ V Y + L +E+ E N+T+F
Sbjct: 291 VSPEVLPHMKQYLEEGKVLYIWKACVERAKPGYRVVDAPYMLKLIMRTEIFEGNSNDTSF 350
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
K++ +L ++N VD+IG + +S ++ R ++ +++ +R IT+ D
Sbjct: 351 ---PKYH-----DLQSFLN----VDVIGKITAIS-NAAVARNTSGDLMMRRLITLQDHKG 397
Query: 347 RTVTVSLWNELATNVGQE-LLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLP 405
T+ +SL + A E + D ++AI F G + +S
Sbjct: 398 NTIDLSLSGQRALEFDAEAVFDIGQNHHVIAI-------FVGTLMKIYREDYKFLS---- 446
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF- 464
WY +E +M + GL + + +L D K +
Sbjct: 447 -GTSACRWYINENDIPAMRTFQRGLPYQVTPIQKLQLQSEDYMEQGVEEKTLFDLKHIDP 505
Query: 465 FSIKAYISLIK-PDQAMW-YRACKTCNKKVTDALGS-GYWC--EGCQKNDEECSLRYIMV 519
+ K ++LI ++ W YRACK CN T LG+ GY C +GC + + +
Sbjct: 506 LTDKCTVTLISLAEKEQWCYRACKVCNS--TLILGNDGYDCTKDGCSCKQYDWKYKVCFI 563
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADEL 549
A D + F ++ +IG SA+ L
Sbjct: 564 A--ADDTYSLQFMFFEKKGVELIGKSAETL 591
>gi|357441937|ref|XP_003591246.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355480294|gb|AES61497.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 524
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 147/346 (42%), Gaps = 24/346 (6%)
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL 271
N+ L D G +I AT+ + +F + G Y + + + +K + +++ +
Sbjct: 42 MNMLLVDAKGGRIHATVRKDLVARFRSMVEEGATYELHNAIVAINEGPYKITSHKHKLGM 101
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDE-LGRYVNGTELVDIIGVV---QNVSPTMSIRR 327
NS + + IP F+F+ +E L V T D+IG V +V T + R
Sbjct: 102 LHNSSFTK--KDLPTIPINVFDFMSFNEILSSNVEETS-ADVIGHVIERGDVKETENEGR 158
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAI----KSLKVG 383
KS D+T+ D + SLW E A + +++ + SP+V I K+ K
Sbjct: 159 KSK-----VIDLTLQDLENNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTRKYL 213
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS 443
GI + G +L + DLPE + Y + K TS+ + + ++ N + S+
Sbjct: 214 GAMGIVNAFYGTKLIL-NGDLPEV----ATYIARMKKTSL-QLTQSVSQISINSSASLSD 267
Query: 444 DRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCE 503
D ++ +T + + S+ A I I+ + ++R+C C VT G C
Sbjct: 268 DLLNTKRMTIESMIESTQVCQGSVLATICEIETEVDWYFRSCTQCATLVTVDNGM-LRCR 326
Query: 504 GCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
C K + R+ + V D +G +F+ + + IG + +L
Sbjct: 327 KC-KTCKSAVPRFKLHVIVMDDTGSTTFVLFDRQVTQFIGRNVQDL 371
>gi|297795577|ref|XP_002865673.1| hypothetical protein ARALYDRAFT_917801 [Arabidopsis lyrata subsp.
lyrata]
gi|297311508|gb|EFH41932.1| hypothetical protein ARALYDRAFT_917801 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 168/405 (41%), Gaps = 70/405 (17%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK DI + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDIELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAK 408
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 409 KLKSWYESEG-----KGTSMASIGSGLG----SLAKNGARSM------YSDRVSLTHITS 453
+ +S ++G S GS + L KN R++ + + +T +T
Sbjct: 240 EFRSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALEEGMCVTMVT- 298
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGC 505
+ ++ +Y +CK CNK V D Y+C C
Sbjct: 299 -----------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGKPPLYYCGVC 341
Query: 506 QKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADEL 549
K+ RY +V V D + +A +F+ ++ +A EL
Sbjct: 342 DKDVSAVVFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQEL 386
>gi|118388117|ref|XP_001027159.1| hypothetical protein TTHERM_00726370 [Tetrahymena thermophila]
gi|89308929|gb|EAS06917.1| hypothetical protein TTHERM_00726370 [Tetrahymena thermophila
SB210]
Length = 580
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 169/426 (39%), Gaps = 86/426 (20%)
Query: 187 WTIKVRVTSKGNMR-TYKNARGEGCVFNVELTDEDGTQIQATMFN-EAARKFYDRFQLGK 244
+ + +V SKG+++ TY++ F +E+ D FN + +Y++ +LGK
Sbjct: 94 FIVTAKVISKGSIKYTYQDKS-----FKIEIYDGSLEHSTLVYFNCQDIENYYEQIELGK 148
Query: 245 VYYISRGTL-RVANKQFKTVQNDYEMNLNENSEV--EEAVNETAFIPQTKFNFVPIDELG 301
VY SR + + A K+ YEM ++ ++ +E++N +K+ + I+++
Sbjct: 149 VYKFSRAIIAKDAQKKEARKCLKYEMFNSQYIQLVEDESINLIYAADFSKYELIKINQIS 208
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNV 361
+ T+ DI+GVV P+ + S + + DET+ T+ VS+ NE N+
Sbjct: 209 E-QHQTDHFDILGVVME-EPSKERVKDSEGRELDTIKFLIGDETRHTLQVSIRNEYGLNL 266
Query: 362 GQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYE------ 415
++ D +V IKS V + S S +LV+PD+ +A L +E
Sbjct: 267 NLKIFD------VVLIKSTHVNVYAN-QKSVDSGSGILVNPDIQQALDLLYSFEKIIQED 319
Query: 416 -----------------------------------SEGKGTSMASIGSGLGSLAKNGARS 440
K IG SL +S
Sbjct: 320 EEDIDYKKDNQLDNSFLTDGKEECKSNELNKQRALKSNKNKEFTQIGENKVSLHFYDVKS 379
Query: 441 MYS---------DRV---SLTHITSNPSLGDE--KPVFFSIKAYISLIKPDQAMWYRACK 486
+ +RV SLTH T +P+ E K ++ I+ I ++ +Y AC
Sbjct: 380 INYVVQQVEDQLERVIRLSLTHSTQDPAFIKEFTKCIYSEIEGEIYSAGIEKKPFYVACS 439
Query: 487 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA-----RVCDGSGEAWISIFNEEAERI 541
C KK+ + QK ++C+ I+ + D +G FNE+ E I
Sbjct: 440 VCKKKIENY-------PVIQKCFKKCAGATIIAKMATNLNIADATGALSALAFNEQCEEI 492
Query: 542 IGCSAD 547
G A+
Sbjct: 493 FGFDAE 498
>gi|349805559|gb|AEQ18252.1| putative replication protein A DNA-binding subunit [Hymenochirus
curtipes]
Length = 298
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 500 YWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDD 559
+ CE C K R I A + D WI+ F E AE I+G +A L ELK + ++
Sbjct: 183 FRCEKCDKEFPNFKYRLIPSANIADFGENQWITCFQESAESILGQNAAYLGELKEK--NE 240
Query: 560 NSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
S+ + + ++ RV V + YN+E R + T V PVD+ S+ L+ I K
Sbjct: 241 QSFDEVFQNANFRSYIFRVRVKLETYNDESRIKATAMEVKPVDYKEYSRKLIMNIRK 297
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 297 IDELGRYVNGTELVDIIGVVQ----NVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
I E+ RY+ T+ +I V++ + + KSNN V KR+I + D + V+ +
Sbjct: 59 ICEVTRYIVNTKGRRVIIVMEMEVLKSADLTKVTIKSNNREVSKRNIHLMDSSGTVVSTT 118
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKS 412
LW E A + + P+VA+K ++ DF G SLS L STV+++PD+PEA KL++
Sbjct: 119 LWGEDADRF------DGSRQPVVAVKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRA 172
Query: 413 WYESE 417
W++SE
Sbjct: 173 WFDSE 177
>gi|297837861|ref|XP_002886812.1| hypothetical protein ARALYDRAFT_893877 [Arabidopsis lyrata subsp.
lyrata]
gi|297852516|ref|XP_002894139.1| hypothetical protein ARALYDRAFT_337008 [Arabidopsis lyrata subsp.
lyrata]
gi|297332653|gb|EFH63071.1| hypothetical protein ARALYDRAFT_893877 [Arabidopsis lyrata subsp.
lyrata]
gi|297339981|gb|EFH70398.1| hypothetical protein ARALYDRAFT_337008 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 168/405 (41%), Gaps = 70/405 (17%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAK 408
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 409 KLKSWYESEG-----KGTSMASIGSGLG----SLAKNGARSM------YSDRVSLTHITS 453
+ +S ++G S GS + L KN R++ + + +T +T
Sbjct: 240 EFRSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALEEGMCVTMVT- 298
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGC 505
+ ++ +Y +CK CNK V D Y+C C
Sbjct: 299 -----------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGKPPLYYCGVC 341
Query: 506 QKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADEL 549
K+ RY +V V D + +A +F+ ++ +A EL
Sbjct: 342 DKDVSAVVFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQEL 386
>gi|38346787|emb|CAE02205.2| OSJNBa0095H06.12 [Oryza sativa Japonica Group]
Length = 1724
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGK 244
W I+ R+ M Y + +V+L DE G + A + A KF Q K
Sbjct: 1261 WKIRARI---ARMWDYTGTANDVPPMHVDLVLVDEKGNAMYAEIPGVEADKFRPLLQESK 1317
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
VY S+ + + +K N Y + L + VE+ A P FN V +L + V
Sbjct: 1318 VYTFSKFLVLPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSDLSQRV 1377
Query: 305 NGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
E D+IG++ VS +R S PKR I + D V + LW E A +
Sbjct: 1378 GMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHALDF-- 1435
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
+AD V ++ VG F G + ++
Sbjct: 1436 ----DADAVHSVGQDNVVVGIFVGTLMKAYNKT 1464
>gi|297838105|ref|XP_002886934.1| hypothetical protein ARALYDRAFT_894112 [Arabidopsis lyrata subsp.
lyrata]
gi|297332775|gb|EFH63193.1| hypothetical protein ARALYDRAFT_894112 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 168/405 (41%), Gaps = 70/405 (17%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAK 408
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 409 KLKSWYESEG-----KGTSMASIGSGLG----SLAKNGARSM------YSDRVSLTHITS 453
+ +S ++G S GS + L KN R++ + + +T +T
Sbjct: 240 EFRSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALEEGMCVTMVT- 298
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGC 505
+ ++ +Y +CK CNK V D Y+C C
Sbjct: 299 -----------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGKPPLYYCGVC 341
Query: 506 QKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADEL 549
K+ RY +V V D + +A +F+ ++ +A EL
Sbjct: 342 DKDVSAVVFRYRLVLEVFDATNYKARFLLFDAMGSTLLRRTAQEL 386
>gi|414883616|tpg|DAA59630.1| TPA: hypothetical protein ZEAMMB73_011121 [Zea mays]
Length = 289
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 8/238 (3%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ L+P N I+VRV K R N G N+ L DE GT I A + A +
Sbjct: 5 PITELDPRNINVVIRVRVIRKWEFRGATN-DGPLRHINLILADEQGTAIHAEIPAALATE 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY I R + + FK VQN+ + + + + P +N
Sbjct: 64 KGSLIQIEKVYEIRRFRVVSSRSYFKPVQNNLMIQFTLYIQAKVVKDPPHIFPIYIYNLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+++ V N L+D IG++ + + +N+ +V RDI + + + ++ ++LW
Sbjct: 124 SFEKIEESVDNKNYLIDAIGMLTQIG-APHVAGYNNSSIV--RDIFIKNISDASLKITLW 180
Query: 355 NELATNVGQE-LLDNADKSPIVAI-KSLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKK 409
+ A+ + + + + PIV + F+G S LS +T +PD+PEA++
Sbjct: 181 GDQASGFSTDNVCNQGNNKPIVIMFFGCLAKQFKGQSYLSGTAATTWYFNPDIPEAQE 238
>gi|358345149|ref|XP_003636645.1| hypothetical protein MTR_050s0040 [Medicago truncatula]
gi|355502580|gb|AES83783.1| hypothetical protein MTR_050s0040 [Medicago truncatula]
Length = 472
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 40/335 (11%)
Query: 221 GTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEA 280
G++I ++ + F R GKVY +S ++ + ++T Q+ Y++ ++V+
Sbjct: 22 GSKIHTSVRKQLLYVFQSRLSEGKVYNLSCFSVAPSAGSYRTTQHPYKIIFQMTTKVQ-- 79
Query: 281 VNETAFIPQTKFNFVP-IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
V+E+ IP+ + +D + LVD++G++ +S + R + V K +
Sbjct: 80 VSESFTIPKYGVSLTKLVDVCAHTYDYDYLVDVVGLMTGIS---NEREYIRDGKVTKMVV 136
Query: 340 TVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVL 399
+ + +L+ + + + + D P+V ++ KV F+GISL+
Sbjct: 137 FQLTDDSGSCECALFGKYVDALNKLMRKAVDGMPVVLVQFAKVKIFKGISLTI------- 189
Query: 400 VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD 459
S++S+G + S+ K G S + H+ +L
Sbjct: 190 -------------------SQISVSSVGINISSVPKLGPCVRASVQEDFLHMHPKKTLAQ 230
Query: 460 -----EKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSL 514
E F + + + WY ACK C++ V Y+C+GC KN +
Sbjct: 231 LHDTPEDGTFVVYATFNGFVDGEDC-WYPACK-CHRSVAPD-SEAYYCKGCVKNVFQMVP 287
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
RY + V D + A +F + + I+ S L
Sbjct: 288 RYRVKINVSDATSVAVFVMFAGDVQNILNLSCSSL 322
>gi|222628302|gb|EEE60434.1| hypothetical protein OsJ_13642 [Oryza sativa Japonica Group]
Length = 479
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGK 244
W I+ R+ M Y + +V+L DE G + A + A KF Q K
Sbjct: 16 WKIRARI---ARMWDYTGTANDVPPMHVDLVLVDEKGNAMYAEIPGVEADKFRPLLQESK 72
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
VY S+ + + +K N Y + L + VE+ A P FN V +L + V
Sbjct: 73 VYTFSKFLVLPSKPAYKPFPNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQFSDLSQRV 132
Query: 305 NGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
E D+IG++ VS +R S PKR I + D V + LW E A +
Sbjct: 133 GMQEYFTDVIGMIIGVSKLAYVRMASKTSDTPKRVIALRDLANCEVKLVLWGEHALDF-- 190
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
+AD V ++ VG F G + ++
Sbjct: 191 ----DADAVHSVGQDNVVVGIFVGTLMKAYNKT 219
>gi|297596244|ref|NP_001042233.2| Os01g0184300 [Oryza sativa Japonica Group]
gi|255672951|dbj|BAF04147.2| Os01g0184300 [Oryza sativa Japonica Group]
Length = 168
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
H L+S L+ N IK RV+ + + R + ++ L DE G I A M+
Sbjct: 3 HILISQLSCGDSNIRIKARVSRLWDFHDLNDDR-KIVHTDLVLLDETGNSIHAQMYQHVI 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
Q GKVYYI T+R AN+ ++ V + + + + +EE V+ A P F+
Sbjct: 62 VNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSLMILFTKWTTLEECVDVPADFPAITFS 121
Query: 294 FVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
P ++ V+ VDI+GV+ + T ++R +S N KR +
Sbjct: 122 LTPFGDVPSLVDKNIFYVDIMGVIAEIGTTSTVRPQSRNTDSLKRTL 168
>gi|297808993|ref|XP_002872380.1| hypothetical protein ARALYDRAFT_911095 [Arabidopsis lyrata subsp.
lyrata]
gi|297318217|gb|EFH48639.1| hypothetical protein ARALYDRAFT_911095 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 168/405 (41%), Gaps = 70/405 (17%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAK 408
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 409 KLKSWYESEG-----KGTSMASIGSGLG----SLAKNGARSM------YSDRVSLTHITS 453
+ +S ++G S GS + L KN R++ + + +T +T
Sbjct: 240 EFRSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALEEGMCVTMVT- 298
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGC 505
+ ++ +Y +CK CNK V D Y+C C
Sbjct: 299 -----------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGNPPLYYCGIC 341
Query: 506 QKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADEL 549
K+ RY +V V D + +A +F+ ++ +A EL
Sbjct: 342 DKDVSAVVFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQEL 386
>gi|357511469|ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
gi|355501038|gb|AES82241.1| Replication factor A protein [Medicago truncatula]
Length = 526
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 165/420 (39%), Gaps = 25/420 (5%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + P+ S+ + N ++VRV + + + E ++ L DE +IQAT
Sbjct: 1 MAPIITPVSSIVAGKINIKLRVRVINLWTVPDFSRPT-EDNFIHLLLMDEKLGKIQATAK 59
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
K Q G Y I + +++ + +++NL + ++ + T IP+
Sbjct: 60 KTLIPKIRSLVQDGAAYEIQNVLVAHNEIRYRCTGHRWKLNLIDQTKFTKIDCNT--IPE 117
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKR----DITVADET 345
F FVP E+ VD+IG V S++ K E++ K+ DIT+ D
Sbjct: 118 YHFEFVPFKEILESTKEDRHVDVIG---RVVERDSLKEK---EVLGKKSMVLDITLEDTE 171
Query: 346 KRTVTVSLWNELATNVGQELLDNADKSPIVAIKSL----KVGDFQGISLSTLGRSTVLVS 401
+ SLW+ A + L + SP++ + L K GIS + G +L
Sbjct: 172 GNRIHCSLWDTYAIRMDAYLTVHDPNSPVIVVIHLCKLKKYYATMGISNAFYGTKLIL-D 230
Query: 402 PDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
D P K+ S + + + GSL A M R+ +T +
Sbjct: 231 DDHPVVKEFLSKIDGADVEVTQG-VSQITGSLIVPLAEDMLQSRM----MTIEDLIESSD 285
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
+ A I I+ + + +Y AC C ++ G + C C ++ R+ + +
Sbjct: 286 QCVVIVLASIIGIEAEYSWYYDACTKCAGRIKIIAGRMF-CPRCNQSRNAVP-RFKLHVQ 343
Query: 522 VCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVA 581
V D +G +F+ +G S +L + + Q +D Y L + L +V +
Sbjct: 344 VMDNTGSTSFILFDRNVSNYVGKSVQDLIDSQGQGNNDKGYPSDLDVLVGKKMLFKVEIT 403
>gi|413935698|gb|AFW70249.1| hypothetical protein ZEAMMB73_039348 [Zea mays]
Length = 416
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
SR T+ A + FK V D ++ ++ ++ +++ + P+ ++ P+ ++ Y+ E
Sbjct: 48 SRFTISSARQMFKPVHIDKMIHFTYHTIIKASLDSPSTFPRYVYHLTPLHQIESYIQKNE 107
Query: 309 -LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG-QELL 366
+D++GV+ VS +R ++ ++I + D T+ ++LW E A ++
Sbjct: 108 YFLDVLGVITQVSALKPVRTQTRESSNVIKEIIIKDINDVTMRLTLWAERAKAFKLDDVY 167
Query: 367 DNADKSPIVAIKSLKVG----DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
+ ++ PIV +L VG +FQG L+ +PD+ EA + S+
Sbjct: 168 NPLEQKPIV---TLFVGCLAKNFQGAYLNGGTTCRWYFNPDIKEAAPYYQRFGSQKVKLQ 224
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY-----ISLIKPD 477
+ S S+AK + H T + L + P F + Y I +
Sbjct: 225 IPSEQEQQLSVAK---------ETHVEHKTLHELLALD-PYAFPKQGYECTVTIIEVPTT 274
Query: 478 QAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
W+ AC C++ G GY+C C+ E +LR
Sbjct: 275 NRWWFPACTKCSRACRPQDG-GYYCSYCK--SEAYTLR 309
>gi|357443253|ref|XP_003591904.1| Replication protein A1 [Medicago truncatula]
gi|355480952|gb|AES62155.1| Replication protein A1 [Medicago truncatula]
Length = 167
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 25/103 (24%)
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
L Y+MV RV D SGEA+IS FNEEA +IIGCS D +L+SQ G+ S +++ +
Sbjct: 76 LEYMMVIRVSDASGEAYISTFNEEAGKIIGCSTD---DLRSQEGESLSNEIEANYL---- 128
Query: 574 HLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++EK+Q T V PV E+KFLL++ISK
Sbjct: 129 ------------DDEKKQ--TSWLVVPV----ETKFLLKDISK 153
>gi|358343248|ref|XP_003635717.1| Replication protein A DNA-binding subunit [Medicago truncatula]
gi|355501652|gb|AES82855.1| Replication protein A DNA-binding subunit [Medicago truncatula]
Length = 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
+KV V + + YKN+R EG + L DE+GT++QAT+ N+ + D + K YYI
Sbjct: 48 LKVLVIQRDLIIPYKNSRNEGTFLTIILLDEEGTKVQATLLNKHKKTCKDALKKNKSYYI 107
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENS 275
S+G L N + +V + E++ +N+
Sbjct: 108 SKGLLDHVNPNYSSVHKEVELSFTDNT 134
>gi|297822339|ref|XP_002879052.1| hypothetical protein ARALYDRAFT_901564 [Arabidopsis lyrata subsp.
lyrata]
gi|297324891|gb|EFH55311.1| hypothetical protein ARALYDRAFT_901564 [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 168/407 (41%), Gaps = 74/407 (18%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVWLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSP------ 402
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 403 ----DLP-EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSM------YSDRVSLTHI 451
LP + L + SE S SI L KN R++ + + +T +
Sbjct: 240 EFRSGLPNDGVVLTNLDNSELFAGSTVSIRDQF--LVKNHKRTVRDIVEALEEGMCVTMV 297
Query: 452 TSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCE 503
T + ++ +Y +CK CNK V D Y+C
Sbjct: 298 T------------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGKPPLYYCG 339
Query: 504 GCQKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADEL 549
C K+ RY +V V D + +A +F+ ++ +A EL
Sbjct: 340 ICDKDVSAVVFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQEL 386
>gi|413952084|gb|AFW84733.1| hypothetical protein ZEAMMB73_599002 [Zea mays]
Length = 289
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNP + N I+VRV K R N G N+ L DE GT I A + A +
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFRGATN-DGPLRHINLILADEQGTAIHAEIPAALAIQ 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY I + + F+ V N+ + ++ + + P +N
Sbjct: 64 KGSLIQIDKVYEIRHFRVMPSRGYFRPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+++ V N L+D+IG++ + + +N+ +V RDI + D + ++ + LW
Sbjct: 124 SFEKVEENVDNRNYLIDVIGMLTQIG-APHVAGYNNSSIV--RDIFIKDISDASLKIMLW 180
Query: 355 NELATNVG-QELLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVSPDLPEAK 408
+ A+ + + ++ PIV + VG F+G S LS+ +T +P++PEA+
Sbjct: 181 GDQASGFSIDNVCNESNNKPIVI---MFVGCLAKQFKGQSYLSSTTATTWYFNPNIPEAQ 237
Query: 409 K 409
+
Sbjct: 238 E 238
>gi|145475015|ref|XP_001423530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390591|emb|CAK56132.1| unnamed protein product [Paramecium tetraurelia]
Length = 635
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 178/434 (41%), Gaps = 58/434 (13%)
Query: 182 PYQGNWTIKVRVTSKGNMRTYKNARGEGC--VFNVELTDEDGTQIQATMFNEAARKFYDR 239
P W ++ R+ K ++ + + F + + D + I + +A KF+
Sbjct: 224 PNMKKWVLEGRIILKSEQLDFRCKKTDMISRYFKIIILDCEQEIIVGLFYEKALSKFFSV 283
Query: 240 FQLGKVYYISRGTL--RVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQT-KFNFVP 296
Q GKVY G + AN K N+Y + + E+ N IP + NF
Sbjct: 284 LQQGKVYTFKNGCIGQDKANGTKKITFNEYSI-------ISESQNFA--IPSAPQLNFST 334
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
+ E+ + +VD++ V+Q I++ S++ + V D+T R ++V LW
Sbjct: 335 LQEIET-LQHNSIVDVVAVIQ------EIKQDSDS----CKSFIVFDQTTR-LSVKLWGA 382
Query: 357 LATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYES 416
N+ N K I+ K LK + SL++ ++ ++ + DL E K+LKSW
Sbjct: 383 QYANI------NLQKGEIMVFKGLKFYNTNFKSLNSDHQTMIIQNHDLNEVKQLKSWLA- 435
Query: 417 EGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE----KPVFFSIKAYIS 472
G + ++ K + D L L +E + + I YI
Sbjct: 436 ----------GKNIDTIMKPNPDNSTIDLQQLDEFV--IKLLNEGKTQQTSYKYIFGYII 483
Query: 473 LIKPDQAMWYRACKT--CNKKVTDALG-SGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ ++ M Y C + C K+ + Y C+ C + +++ + D
Sbjct: 484 ELQENRNM-YPCCPSLRCKSKMEEIPSRKTYRCKKCLTENPSPKFSFVLRVTIMDEFTNI 542
Query: 530 WISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEK 589
IF++ A +++G +AD+L + S N + K + ++V + Q+YN +
Sbjct: 543 KAVIFDDIAVKLLGITADQLRAM-SHEDQRNIFLSK----EFQQKKMKVQIQFQDYNGQI 597
Query: 590 RQRVTVRAVAPVDF 603
+ + V+ + +D+
Sbjct: 598 QPKYNVQDIVDIDY 611
>gi|403363046|gb|EJY81258.1| hypothetical protein OXYTRI_21347 [Oxytricha trifallax]
Length = 384
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
+ P+ +LN + +W I+ ++ K +R + R + V +E+ D GT I+ T F +A
Sbjct: 137 KYMPIKALNTFSRDWQIQAKLARKSELR--ETQRQKTVVLKIEIIDVFGTTIECTFFADA 194
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDY 267
A+ F R ++ KVY S G ++ +K+F T+ ND+
Sbjct: 195 AKDFNQRLEVNKVYLFSNGQVKPNDKRFSTLPNDF 229
>gi|297838097|ref|XP_002886930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332771|gb|EFH63189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 496
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 167/405 (41%), Gaps = 70/405 (17%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I A + ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHAIVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAK 408
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 409 KLKSWYESEG-----KGTSMASIGSGLG----SLAKNGARSM------YSDRVSLTHITS 453
+ +S ++G S GS + L KN R++ + + +T +T
Sbjct: 240 EFRSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALEEGMCVTMVT- 298
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGC 505
+ ++ +Y +CK CNK V D Y+C C
Sbjct: 299 -----------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGKPPLYYCGVC 341
Query: 506 QKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADEL 549
K+ RY +V V D + +A +F+ ++ +A EL
Sbjct: 342 DKDVSAVVFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQEL 386
>gi|224108251|ref|XP_002333414.1| predicted protein [Populus trichocarpa]
gi|222836505|gb|EEE74912.1| predicted protein [Populus trichocarpa]
Length = 756
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 137/347 (39%), Gaps = 24/347 (6%)
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ-NDYEMN 270
F+ T G IQA F G Y I +G N+ TV +D ++
Sbjct: 261 FHTRATVYQGGAIQALAKTRDLLTFAATIIEGNHYEI-KGFYTYENRVVNTVAVHDAVID 319
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKS 329
L N+++ T +P+ FNF+ + G+ L D++G ++ + P +
Sbjct: 320 LKSNTKITGIEAITPHVPRYYFNFIDYAHILTKSKGSRILTDVLGRLKALQPLEQVM-VC 378
Query: 330 NNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-I 388
+ KR+ + + + ++LW + A + + L N I+A +V +F+G
Sbjct: 379 GQTLENKREFMLENIRGEELHITLWGDSARDFDELALHNLPSPVIIAFAGFRVTEFKGKP 438
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWYESEG----KGTSMASIGSGLGSLAKNGARSMYSD 444
+L++ S +PD+PE K ++ + S +++ + K R+++
Sbjct: 439 NLNSTTTSLWYFNPDIPECLAYKHFFAQLPVEIQQLPSSSNVVLSIEEQIKENRRTIHEI 498
Query: 445 RVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEG 504
+ NP + K + F+ +A I WY +C CNKK L G
Sbjct: 499 ------LCMNPY--EHKHLRFTYQASIVDFDFPNGWWYPSCPKCNKK----LSGGEKNYT 546
Query: 505 CQKNDEECSLR---YIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
C +D SL + + V DG +F + AE G SA
Sbjct: 547 CMDHDAITSLPVPWFRLECIVTDGEDVTNFFLFGKTAENFFGSSAHH 593
>gi|414878469|tpg|DAA55600.1| TPA: hypothetical protein ZEAMMB73_967972 [Zea mays]
Length = 626
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 116/305 (38%), Gaps = 60/305 (19%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G I A +F +KF + G +Y I+ +R +N +K V N+ + +
Sbjct: 180 LLDEEGNGIHAAIFPPVIQKFKPLIKEGVIYNITYFRVRASNNLYKPVFNENMITFTNWT 239
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
++EE V P ++ PID+L V+ E D IG+V ++S R + +
Sbjct: 240 KLEEVVEVPPAFPVLTYSLTPIDQLHLCVDHREYYTDAIGIVTSISAVAPHRSRGQHTTS 299
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
KR I++ +V +L+ P V G+ LS
Sbjct: 300 SKRTISLC-----------------SVSWDLM------PFV---------LDGLCLSGGS 327
Query: 395 RSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
++PD+PEA L MAS + N + S + H+
Sbjct: 328 PCKWYINPDVPEACAL------------MASARKAHSPIKWN---EVLSSNQPMPHVPEE 372
Query: 455 PSLG---DEKPVFFSIKAY---ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKN 508
+ D P + + +++ K WY ACK C + A G Y C +
Sbjct: 373 QKIACIRDLHPFENKDREFLVTVTVKKIGDRWWYNACKKCTRTAV-AHGDSYKC-----S 426
Query: 509 DEECS 513
D+ C+
Sbjct: 427 DQVCA 431
>gi|449688707|ref|XP_004211822.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Hydra magnipapillata]
Length = 99
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
A + D SG WI+ F E AE I+ SA+++ LK D + + M E + P + +V
Sbjct: 1 ANIADFSGNQWITAFQESAEAILCVSAEQIGHLKDS--DVSQFDMIFSEACFKPFVFKVR 58
Query: 580 VAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ Y +E++ + + + APV+F E K LL+EI
Sbjct: 59 AKMETYQDERKLKCSAMSAAPVNFKQECKRLLDEI 93
>gi|32565075|ref|NP_494733.2| Protein R03H10.6 [Caenorhabditis elegans]
gi|351062333|emb|CCD70303.1| Protein R03H10.6 [Caenorhabditis elegans]
Length = 324
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 157 DQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
DQN + PAA V P+ +LN N+ I RVT + R R E VF+ E+
Sbjct: 110 DQNVDAPPAA-------VTPIANLNDSVDNFKIHGRVTLMDDKR-----RPEK-VFSFEI 156
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
TD +G I+ F E + Y + YY++ G ++ + + + +E+ L+E
Sbjct: 157 TDVNGYTIRCVAFGELGVRLYGSIAKDQSYYLTGGKVKNGHTLYNQTGHAFEIILDEFPT 216
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
+E A +P+ N V + + + +D+I V+ ++ + N+
Sbjct: 217 IEPA-PAVLTVPKLNLNRVMLCNVQNEQYYRKPIDVIVAVEEINDFLDDYHPIENKPPVL 275
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG 387
R++ V D++ + ++LW A + G E N IVA K + F+G
Sbjct: 276 RNMVVIDDSNFRIRLTLWGYRAMDSGVEEFQNK----IVAFKGIVPTQFEG 322
>gi|156312429|ref|XP_001617826.1| hypothetical protein NEMVEDRAFT_v1g225758 [Nematostella vectensis]
gi|156195990|gb|EDO25726.1| predicted protein [Nematostella vectensis]
Length = 115
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 454 NPSLG-DEKPVFFSIKAYISLIKPDQAMWYRACKT--CNKKVTDALGSGYWCEGCQKNDE 510
N LG EK + S+K + + M Y+AC + CNKKV + SG++CE C +
Sbjct: 13 NEQLGMGEKADYISVKGVCVYFRRENCM-YKACPSEECNKKVIEE-DSGFYCEKCGRKYP 70
Query: 511 ECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELK 553
R I+ A + D +G W++ F E AE ++G SA +L ++K
Sbjct: 71 NYKYRLILSAHLADFTGSQWVTCFQESAEALLGRSASDLGQMK 113
>gi|20198198|gb|AAM15454.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 521
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 136/345 (39%), Gaps = 30/345 (8%)
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAV 281
+Q T+ KF+ ++G I L + ++K Y M N+EV ++V
Sbjct: 1 MQVTLRKHYIGKFHRSLKVGDWKIIDNFNLSPSTGKYKISSLSYPMGFKHNTEVSKCDSV 60
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+++ F+ F + + V L+DI+G V +V I + N+ K + +
Sbjct: 61 SDSVFLDLADFEGIKTESYDENV----LIDILGQVVSVGKVDEIV--AQNKPNKKLEFQI 114
Query: 342 ADETKRTVTVSLWNELATNVGQELLD-NADKSPIVAIKSLKVGDFQG-ISL-STLGRSTV 398
D + ++ +LW A V L D+ +V I+ K+ +F+ IS+ S S V
Sbjct: 115 RDVSNELLSCTLWGVFAEKVFSALKSVKHDQKTVVLIRYAKINNFKSEISITSAFDVSDV 174
Query: 399 LVSP-DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSL 457
++ P +PE S+G ++ + ++ + + +
Sbjct: 175 IIHPVHVPEVDLFVKSLPSDGLALTIQDSYVNRDIIKTKSVDFFDYPAKTIVDLLNGRDV 234
Query: 458 GDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSG-------------YWCEG 504
G + I I I D +Y C CN+K+ S +WC+
Sbjct: 235 GQ-----WRILGSIFAIDTDWGWFYFGCPKCNRKIELVKESTSTVKRIQAPTKPKFWCDK 289
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
Q++ RY + RV D +GE + +F A +I S++EL
Sbjct: 290 YQESITNVEARYKLHIRVMDQTGEIKLMVFENNATNLIRKSSEEL 334
>gi|7529269|emb|CAB86685.1| putative protein [Arabidopsis thaliana]
Length = 303
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 139/357 (38%), Gaps = 79/357 (22%)
Query: 165 AARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQI 224
AA A R + PY+ +W I+V+V + R Y + GE + L D G +I
Sbjct: 2 AASFAFLR------DIRPYKTSWRIQVKVFH--SWRQYTSMTGE--TLELVLVDAHGVKI 51
Query: 225 QATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNET 284
A++ + F + L + +I L A+ QF+ + Y+M
Sbjct: 52 HASVKKDLVSNFVNNLLLNEWRFIETFALNHASGQFRPTGHLYKMT-------------- 97
Query: 285 AFIPQTKFNFVPIDELGRYVNGTE--LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+V GT+ L+D++G V ++ ++ K N+ K D +
Sbjct: 98 ------------------FVTGTQCILLDVMGQVVDIGELETLEAK--NKPTIKLDFELR 137
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLS-TLGRSTVLV 400
D+T ++ +LW A +V + I ++ K+ ++G+ S S + S V +
Sbjct: 138 DDTDERMSCTLWGAFAQSVFSACEFADGQMVICVLRFAKIKSYKGVRSFSNSFYASQVHI 197
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
+PD PE + + S M ++ K +R S+ + +
Sbjct: 198 NPDFPEVQA----FVSRVPKFHMVTV--------KQDDDCKQYERKSIRDFLHSMEV--- 242
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTD--------ALGSG---YWCEGCQ 506
+ I + D + +Y +C+ CNKKVT +L S +WC+ C+
Sbjct: 243 -----RVVCTIYALDTDWSWYYFSCRNCNKKVTHIHAGVNTTSLKSSKPRFWCDVCK 294
>gi|77555599|gb|ABA98395.1| hypothetical protein LOC_Os12g27380 [Oryza sativa Japonica Group]
Length = 609
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 211 VFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN 270
V++++ + T +Q M+ A G VYYI T++ AN+ ++ V ND+ +
Sbjct: 257 VYHIQNLKGNSTHVQ--MYRGAIEVLKPLIHEGNVYYIESFTVKDANRTYRPVSNDFMIL 314
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKS 329
++ + +EE ++ A P F+ P E+ V+ VDI+GV+ +S T ++R +S
Sbjct: 315 FSKWTTLEECIDIPADFPAITFSLTPFQEIPSLVDKNIFYVDIMGVITEISSTSTVRPRS 374
Query: 330 NNEMVPKRDITVADET 345
+ KR + + D +
Sbjct: 375 RDADSLKRTLQICDAS 390
>gi|413954915|gb|AFW87564.1| hypothetical protein ZEAMMB73_967726 [Zea mays]
Length = 289
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNP + N I+VRV K R N G N+ L DE GT I A + A +
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFRGATN-DGPLRHINLILADEQGTAIHAEIPAALAIE 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ VY I + + FK V N+ + ++ + + P +N
Sbjct: 64 KGSLIQIDIVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+++ V N L+D+IG++ + + +N+ +V RDI + D + ++ ++LW
Sbjct: 124 SFEKVEENVDNRNYLIDVIGMLTQIG-APHVAGYNNSSIV--RDIFIKDISDASLKITLW 180
Query: 355 NELATNVG-QELLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVSPDLPEAK 408
+ A+ + + ++ PIV + VG F+G S LS+ +T +P++PEA+
Sbjct: 181 GDQASGFSIDNVCNESNNKPIVI---MFVGCLAKQFKGQSYLSSTTATTWYFNPNIPEAQ 237
Query: 409 K 409
+
Sbjct: 238 E 238
>gi|77551838|gb|ABA94635.1| hypothetical protein LOC_Os11g38310 [Oryza sativa Japonica Group]
Length = 764
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 60/382 (15%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYK--NARGEGCVFNVELT--DEDGTQIQATMFNEA 232
+ +L P W IKV+V +R + N + +++ D +G I ++ +
Sbjct: 7 ITALTPKNDRWRIKVKV-----IRLWDAVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQL 61
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIP 288
A F + ++ +Y K FK +++D L N ++ + V ET
Sbjct: 62 ANHFRPKIKINSIYTF---------KNFKVMEHDKYRVLKNNLKILFYHDTIVKETCL-- 110
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT---MSIRRKSNNEMVPKRDITVADET 345
+D+IG++ + P M + S + R+I +
Sbjct: 111 --------------------YLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLE 150
Query: 346 KRTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPD 403
V ++LW ++ N V +LL K + L V +++ + S + V + +
Sbjct: 151 GEKVKITLWGDILANMVDDDLLG---KQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDME 207
Query: 404 LPEAKKLKSWYESEGKGTSMASI-GSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEK 461
+P + ++ S + +E +M + S G++ + M+ +R +L IT S +K
Sbjct: 208 IPASMEILSRHNAEKVLPTMIEVDASTQGTIEE----QMFYNRKTLKEITELRYSNIQQK 263
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
++KA I IK + WY +C C T + Y C C K RY++
Sbjct: 264 EFICTVKAKIEEIKS-RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLE 321
Query: 522 VCDGSGEAWISIFNEEAERIIG 543
+ D + +IFNEEAERI G
Sbjct: 322 ISDHTTRTTCTIFNEEAERIFG 343
>gi|297852032|ref|XP_002893897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339739|gb|EFH70156.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 492
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 184/448 (41%), Gaps = 69/448 (15%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
LNP + W ++ +V R + R VF L D +G++I AT+ ++ +KF
Sbjct: 13 LNPSKYEWVVETKVLCSWTRRLENSGRR--LVF--VLADREGSRIHATVEDKNIKKFDSV 68
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDE 299
+ G V ++ L + +K+ +++ ++V+ + +P+ F E
Sbjct: 69 LKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV-----E 123
Query: 300 LGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
G +NG+ VD+IG + NV P + IR KS PK D+ + D + +L
Sbjct: 124 FGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICTL 179
Query: 354 WNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAKK 409
+ A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P +
Sbjct: 180 LADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVDE 236
Query: 410 LKSWYESEG-----KGTSMASIGSGLG----SLAKNGARSM------YSDRVSLTHITSN 454
+S ++G S GS + L KN R++ + + +T +T
Sbjct: 237 FRSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTVRDIVEALEEGMCVTMVT-- 294
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGCQ 506
+ ++ +Y +CK CNK V D Y+C C
Sbjct: 295 ----------------VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGNPPLYYCGICD 338
Query: 507 KNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK 565
K+ RY +V V D + +A +F+ ++ +A EL S+ D + ++
Sbjct: 339 KDVSAVVFRYRLVLEVSDATNYKARFLLFDAMGSTLLRRTAQELYNAVSE-NDPSILPLE 397
Query: 566 LKEVTWVPHLLRVSVAQQEYNNEKRQRV 593
+ + L +VS+ +++ V
Sbjct: 398 IGALVGRRFLFKVSIGGDNLKSDRSHYV 425
>gi|357498253|ref|XP_003619415.1| Coiled-coil domain-containing protein [Medicago truncatula]
gi|355494430|gb|AES75633.1| Coiled-coil domain-containing protein [Medicago truncatula]
Length = 705
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L D++G +I AT+ + F + GKVY +S T+ + + ++T + Y++ +
Sbjct: 42 LIDQNGVKIHATIPKQLMYLFQHKLIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKT 101
Query: 276 EVEEAVN-ETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEM 333
+VEE+ + E + IP I ++ E LVD+IG++ +S R + ++
Sbjct: 102 KVEESHDYEISLIPNHGLTLTDISQITSRTQDYEYLVDVIGLMTGISAEREFVR--DGKL 159
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGIS--LS 391
I + D + + +L+ + + + + SP++ I+ KV F+G + +
Sbjct: 160 TKILVIELTDHSGK-CECTLFGNYVDELHKLMSKAVEGSPVIVIQFAKVKIFRGKASIQN 218
Query: 392 TLGRST-VLVSPDLPEAKKLK 411
+G +T + ++P PEA K K
Sbjct: 219 VVGSTTRIYLNPSFPEALKFK 239
>gi|413932344|gb|AFW66895.1| hypothetical protein ZEAMMB73_049939 [Zea mays]
Length = 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 28/243 (11%)
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IG V +S +IR K KR +T+ +E+ + V LW AT+ AD
Sbjct: 29 DVIGAVTMISDVATIRTKMRQTQTAKRSVTIQNESCTPLEVVLWGGQATSF------PAD 82
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVL---------VSPDLPEAKKLKSWYESEGKGT 421
+ I SL++ F G + +T L V+P +PEA L + + + +
Sbjct: 83 QISIAGQDSLQIIIFVGTLARSYAGTTSLTGGSSCKWYVNPQVPEATSLAASLQHK-RSP 141
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMW 481
M++ GS + R ++ ++ I EK + ++++K DQ W
Sbjct: 142 IMSAAGS-----TQRVPRISTAEHKKVSEIKHLHPFKHEKVEWL---VTVTVLKIDQLWW 193
Query: 482 YRACKTCNKKVTDALGSGYWC--EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
Y +C+ C KK T G Y C GC + RY ++ D GE +F A+
Sbjct: 194 YESCRKCLKK-TKPHGDAYKCSDSGCGHVGPP-NPRYRLLITAGDEIGETDFILFGRMAQ 251
Query: 540 RII 542
RI+
Sbjct: 252 RIV 254
>gi|297724261|ref|NP_001174494.1| Os05g0523100 [Oryza sativa Japonica Group]
gi|255676500|dbj|BAH93222.1| Os05g0523100 [Oryza sativa Japonica Group]
Length = 1068
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 163/405 (40%), Gaps = 72/405 (17%)
Query: 154 ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYK--NARGEGCV 211
++RD NMAP+ + + L P W IKV+V +R + N
Sbjct: 244 LVRD---NMAPS---------NLITELTPKNDRWRIKVKV-----IRLWDAVNPTMVDEF 286
Query: 212 FNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM 269
+ +++ D +G I ++ + A F + ++ +Y K FK +++D
Sbjct: 287 YGIQMIVLDAEGNSIHVSISKQLANHFRPKIKINSIYTF---------KNFKVMEHDKYR 337
Query: 270 NLNENSEV----EEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT--- 322
L N ++ + V ET +D+IG++ + P
Sbjct: 338 VLKNNLKILFYHDTIVKETCL----------------------YLDVIGLLSGMKPIEQR 375
Query: 323 MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLK 381
M + S + R+I + V ++LW ++ N V +LL K + L
Sbjct: 376 MLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDLLG---KQTVFIATGLL 432
Query: 382 VGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI-GSGLGSLAKNGAR 439
V +++ + S + V + ++P + ++ S + +E +M + S G++ +
Sbjct: 433 VKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEE---- 488
Query: 440 SMYSDRVSLTHITS-NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGS 498
M+ +R +L IT S +K ++KA I IK + WY +C C T +
Sbjct: 489 QMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIKS-RNWWYMSCDKCFCG-TRKESN 546
Query: 499 GYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG 543
Y C C K RY++ + D + +IFNEEAERI G
Sbjct: 547 VYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERIFG 591
>gi|77552440|gb|ABA95237.1| hypothetical protein LOC_Os11g44840 [Oryza sativa Japonica Group]
Length = 757
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 60/382 (15%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYK--NARGEGCVFNVELT--DEDGTQIQATMFNEA 232
+ +L P W IKV+V +R + N + +++ D +G I ++ +
Sbjct: 7 ITALTPKNDRWRIKVKV-----IRLWDAVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQL 61
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIP 288
A F + ++ +Y K FK +++D L N ++ + V ET
Sbjct: 62 ANHFRPKIKINSIYTF---------KNFKVMEHDKYRVLKNNLKILFYHDTIVKETCL-- 110
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT---MSIRRKSNNEMVPKRDITVADET 345
+D+IG++ + P M + S + R+I +
Sbjct: 111 --------------------YLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLE 150
Query: 346 KRTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPD 403
V ++LW ++ N V +LL K + L V +++ + S + V + +
Sbjct: 151 GEKVKITLWGDILANMVDDDLLG---KQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDME 207
Query: 404 LPEAKKLKSWYESEGKGTSMASI-GSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEK 461
+P + ++ S + +E +M + S G++ + M+ +R +L IT S +K
Sbjct: 208 IPASMEILSRHNAEKVLPTMIEVDASTQGTIEE----QMFYNRKTLKEITELRYSNIQQK 263
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
++KA I IK + WY +C C T + Y C C K RY++
Sbjct: 264 EFICTVKAKIEEIKS-RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLE 321
Query: 522 VCDGSGEAWISIFNEEAERIIG 543
+ D + +IFNEEAERI G
Sbjct: 322 ISDHTTRTTCTIFNEEAERIFG 343
>gi|440799699|gb|ELR20743.1| leucine rich repeat-containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1419
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 463 VFFSIKAYISLIKPDQAMWYRACK--TCNKKVTDALGS--GY--------------WCEG 504
V+ S+ ++ I+ MWY AC C+KKV + G GY +C+
Sbjct: 1241 VYASVVCTVNEIR-TSGMWYPACPWPKCHKKVEEYHGGDEGYDGEEEGQQHHQKRWYCKT 1299
Query: 505 CQKNDEECSL-RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQ 563
C + + RY+ R+ D +G+ W+ F+E A ++G SA EL++LK D+ +
Sbjct: 1300 CNRVYAGRYVNRYMASLRIVDHTGDLWLRAFDEAAAPLLGTSAQELSQLKD--FDETLFV 1357
Query: 564 MKLKEVTWVPHLLRVSVAQQEYNNEK 589
K+KE H +RV V Q+ Y +
Sbjct: 1358 DKVKEAQLQRHEMRVKVVQETYQGRR 1383
>gi|77552149|gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza sativa Japonica Group]
Length = 800
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 153/382 (40%), Gaps = 60/382 (15%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNAR----GEGCVFNVELTDEDGTQIQATMFNEA 232
+ +L P W IKV+V +R + E ++ + D +G I ++ +
Sbjct: 7 ITALTPKNDRWRIKVKV-----IRLWDAVNPTMVDEFYGIHMIVLDAEGNSIHVSISKQL 61
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIP 288
A F + ++ +Y K FK +++D L N ++ + V ET
Sbjct: 62 ANHFRPKIKINSIYTF---------KNFKVMEHDKYRVLKNNLKILFYHDTIVKETCL-- 110
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT---MSIRRKSNNEMVPKRDITVADET 345
+D+IG++ + P M + S + R+I +
Sbjct: 111 --------------------YLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLE 150
Query: 346 KRTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPD 403
V ++LW ++ N V +LL K + L V +++ + S + V + +
Sbjct: 151 GEKVKITLWGDILANMVDDDLLG---KQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDME 207
Query: 404 LPEAKKLKSWYESEGKGTSMASI-GSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEK 461
+P + ++ S + +E +M + S G++ + M+ +R +L IT S +K
Sbjct: 208 IPASMEILSRHNAEKVLPTMIEVDASTQGTIEE----QMFYNRKTLKEITELRYSNIQQK 263
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
++KA I IK + WY +C C T + Y C C K RY++
Sbjct: 264 EFICTVKAKIEEIKS-RNWWYMSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLE 321
Query: 522 VCDGSGEAWISIFNEEAERIIG 543
+ D + +IFNEEAERI G
Sbjct: 322 ISDHTTRTTCTIFNEEAERIFG 343
>gi|290990877|ref|XP_002678062.1| single stranded DNA binding, replication factor-a protein
[Naegleria gruberi]
gi|284091673|gb|EFC45318.1| single stranded DNA binding, replication factor-a protein
[Naegleria gruberi]
Length = 1043
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDE---------DGTQIQA 226
P L+P +W IKV+V K N +++ N RG G V + + DE +++
Sbjct: 542 PFSQLDPVLDDWCIKVKVIKKHNEKSWANERGSGRVAAITIADELSGDMSLSSKQNKVKL 601
Query: 227 TMFNEAARKFYDRFQLGKVYYISRGTL 253
MFN+ +FYD+ + G+ YY+++G L
Sbjct: 602 IMFNDCINEFYDQMEEGESYYVNKGHL 628
>gi|218189336|gb|EEC71763.1| hypothetical protein OsI_04360 [Oryza sativa Indica Group]
Length = 397
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G + A + A KF Q KVY S+ + + +K N Y + L +
Sbjct: 20 LIDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLVLPSKPAYKPFPNKYMIKLTPWT 79
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE+ A P FN V +L V E D+IG++ VS +R S
Sbjct: 80 NVEQVNEVPADFPSHVFNLVQFSDLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDT 139
Query: 335 PKRDITVADETKRTVTVSLWNELA--------TNVGQELLDNA 369
PKR I + D V + LW E A NVGQ DNA
Sbjct: 140 PKRVIALRDLANCEVKLVLWGEHALDFDVDAVHNVGQ---DNA 179
>gi|302756891|ref|XP_002961869.1| hypothetical protein SELMODRAFT_77809 [Selaginella moellendorffii]
gi|300170528|gb|EFJ37129.1| hypothetical protein SELMODRAFT_77809 [Selaginella moellendorffii]
Length = 217
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 22/189 (11%)
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS 432
PI+ +K KV D+ G SL +G ST+L+ P++ L+ W T+ +
Sbjct: 11 PIICVKGGKVSDYNGKSLLAIGVSTILIEPEMEAVADLREWMTLYYNITNFIHLSV---- 66
Query: 433 LAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------K 486
S +L+ I+S E + + A + +K D+ +Y AC +
Sbjct: 67 ----------SCTTTLSEISSMQLKVLESFPIYRVIATMKEMKTDE-FYYNACINVVNAQ 115
Query: 487 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
C +K T +G++C C +Y + + D S W F E A+ I+G A
Sbjct: 116 QCGRKTTQT-ANGWFCSYCNIEFANMEFKYALKMCIKDSSSHVWAIAFQEVAQEIVGMPA 174
Query: 547 DELNELKSQ 555
EL ++ +
Sbjct: 175 KELATMRYE 183
>gi|5732052|gb|AAD48951.1|AF147262_14 contains similarity to Oryza sativa replication protein A1
(GB:AF009179) [Arabidopsis thaliana]
gi|7267341|emb|CAB81115.1| AT4g07450 [Arabidopsis thaliana]
Length = 439
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 30/287 (10%)
Query: 279 EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRD 338
+ V++ F+ KF+ + L N L +++G V + S + +NN+ K D
Sbjct: 33 DTVSDALFLSLAKFDVI----LSGSANSNILHNVMGQVVDRSKIQDL--NANNKPTKKID 86
Query: 339 ITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG---DFQGISLSTLGR 395
+ D+ + +LW + A V Q ++AD + + I+ K+ D + +S ++
Sbjct: 87 FHLRDQHDTRLACTLWGKYAEIVDQACQESADGTVVCLIRFAKINLYNDTKSVS-NSFDV 145
Query: 396 STVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSL--AKNGARSMYSDRVSLTHITS 453
S V V P L E K ++G ++ S GS L + G R ++ + +
Sbjct: 146 SQVFVDPTLAELGLFKQSIPTDG--LTLGSSGSFHKRLYAPRTGDDDGDYPRQTIKDVLT 203
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALG-----------SGYWC 502
+ +G K V +S I D +Y C+ NKKV + +WC
Sbjct: 204 SSDVGKCKTV-----CTVSAIDTDWPWYYFCCRAHNKKVVEEEAIKLEDVKLPQKPRFWC 258
Query: 503 EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
E C + ++ + + +GEA +F+ A+ I G A EL
Sbjct: 259 EICNGFAKYVVAKFWLHLHIMGQTGEARCMLFDSHAKEIFGTIAPEL 305
>gi|357441137|ref|XP_003590846.1| Replication factor A protein [Medicago truncatula]
gi|355479894|gb|AES61097.1| Replication factor A protein [Medicago truncatula]
Length = 513
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 150/346 (43%), Gaps = 30/346 (8%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + H + + + W IKVRV + + N V E GT+I A +
Sbjct: 1 MEKPFHSVSEIATGKDGWKIKVRVLRLWEVPAFLNPDQTNSV-------EMGTKIHAGVR 53
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ F + GKVY +S ++ + ++T + Y++ ++V+ V E A IP
Sbjct: 54 KQLLYVFQSKLSEGKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQ--VCEDASIPS 111
Query: 290 TKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ I ++ ++ + + LVD++G + ++S R + V K + +
Sbjct: 112 FGISLCKIVDVCQHTSDHDYLVDVLGFMTDISAE---REYVRDGKVTKMVVFEITDASGK 168
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRST-VLVSPDLPE 406
+L+ + + + + +A PI+ ++ KV F+ SL + +T +L++ + +
Sbjct: 169 CECALFGQYVDTLNKLMGKSAGGMPIILVQFAKVKIFRDKASLQNVINTTWILINLPIEQ 228
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF-- 464
+++ K + S + + S+ + G+RS S +L F
Sbjct: 229 DDQVR-------KSVTFGS--TDVSSIPRIGSRSKVSLEEDFLRTYPKKTLEQLHSTFDD 279
Query: 465 --FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKN 508
F + + IS + + WY ACK C++ V+ G+ ++C+GC K+
Sbjct: 280 GVFVVYSTISGLVDHEDWWYPACK-CHRSVSADSGA-FYCKGCAKH 323
>gi|125547080|gb|EAY92902.1| hypothetical protein OsI_14707 [Oryza sativa Indica Group]
Length = 455
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 7/182 (3%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G + A + A KF Q KVY S+ + + +K N Y + L +
Sbjct: 20 LVDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLVLPSKPAYKPFPNKYMIKLTPWT 79
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE+ A P FN V +L V E D+IG++ VS +R S
Sbjct: 80 NVEQVNEVPADFPSHVFNLVQFSDLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDT 139
Query: 335 PKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLG 394
PKR I + D V + LW E A + +AD V ++ VG F G +
Sbjct: 140 PKRVIALRDLANCEVKLVLWGEHALDF------DADAVHSVGQDNVVVGIFVGTLMKAYN 193
Query: 395 RS 396
++
Sbjct: 194 KT 195
>gi|351700393|gb|EHB03312.1| Replication protein A 70 kDa DNA-binding subunit [Heterocephalus
glaber]
Length = 162
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 429 GLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT- 487
GLG+ + N +++Y + + N GD+ F S+ + L K + Y AC T
Sbjct: 11 GLGA-SNNNWKTLYEVK------SENLGQGDKADYFSSVATVVYLHKENCM--YLACSTQ 61
Query: 488 -CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
CNKKV D Y CE C R I++ + D W++ F E AE I+G +
Sbjct: 62 DCNKKVIDQQNGLYCCEKCDHEFPNFKYRMILLGNILDFQENQWVTCFQESAEAILGQNT 121
Query: 547 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
L ELK + + +++ + + + ++ V + YN+E
Sbjct: 122 AYLGELKEK--NKQAFEEGFQNANFRSFMFKIRVKLETYNDE 161
>gi|302825877|ref|XP_002994510.1| hypothetical protein SELMODRAFT_432429 [Selaginella moellendorffii]
gi|300137509|gb|EFJ04425.1| hypothetical protein SELMODRAFT_432429 [Selaginella moellendorffii]
Length = 373
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 377 IKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKN 436
+K ++ D+ G S+S G ST+LV P+L + L W + T+ + +
Sbjct: 153 MKGGRISDYNGKSISVTGGSTLLVDPELEDVSWLHEWMVASYDTTNFVHVTNSSSKAVIY 212
Query: 437 GARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRAC------KTCNK 490
G +++ S+ +S+ N + + +F I + + D +Y AC + C+K
Sbjct: 213 GTKTV-SEMLSI-----NLKVSEFSAIFRVIVSVKEIQTGD--FYYPACMKVVNGRQCSK 264
Query: 491 KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELN 550
KVT S + C C + + L+Y + + D +G W F++ A I+G A +L
Sbjct: 265 KVTQVSESMWQCNSCDSDSGDIQLKYALHLCILDSTGHIWAVAFDDAANEIVGMPACKLA 324
Query: 551 ELK 553
L+
Sbjct: 325 ALQ 327
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ +N + W+++ RVT KG + ++ GCV +V++ D + ++I F E A++
Sbjct: 33 PIKDINDHCYRWSLRARVTHKGKLVFFETGT-VGCVMSVDVADAESSKICIVGFGENAKR 91
Query: 236 FYDRFQLGKVYYIS 249
+ G VY S
Sbjct: 92 LSSEIEQGSVYIFS 105
>gi|414589506|tpg|DAA40077.1| TPA: hypothetical protein ZEAMMB73_356509 [Zea mays]
Length = 388
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 8/239 (3%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
V L L+P N I+VRV K R N G N+ L DE GT I A + A
Sbjct: 34 VKTLKELHPQSTNAIIRVRVIRKWEFRGATN-DGPLQHINLVLADEQGTPIHAEIAAALA 92
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
++ KVY + R + + FK V N++ + ++ + + P+ +
Sbjct: 93 VDKGSMIEIEKVYELKRFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYK 152
Query: 294 FVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ + + N T L+D++G++ ++P I NN + RDI + + + ++ ++
Sbjct: 153 LTCFENIEDNIDNRTYLIDVLGMLTQINPPHLI--GYNNSTI-IRDIFIKNTSDMSLKIT 209
Query: 353 LWNELATNVG-QELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAK 408
LW A++ ++ + ++ PIV + F+G LS+ S+ +P +PEA+
Sbjct: 210 LWGNQASSFSISDVYNQSNNQPIVILLVRFLAKRFKGQPYLSSTTASSWYFNPGIPEAQ 268
>gi|55168169|gb|AAV44036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 820
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 155/385 (40%), Gaps = 66/385 (17%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYK--NARGEGCVFNVELT--DEDGTQIQATMFNEA 232
+ L P W IKV+V +R + N + +++ D +G I ++ +
Sbjct: 7 ITELTPKNDRWRIKVKV-----IRLWDAVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQL 61
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIP 288
A F + ++ +Y K FK +++D L N ++ + V ET
Sbjct: 62 ANHFRPKIKINSIYTF---------KNFKVMEHDKYRVLKNNLKILFYHDTIVKETCL-- 110
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPT---MSIRRKSNNEMVPKRDITVADET 345
+D+IG++ + P M + S + R+I +
Sbjct: 111 --------------------YLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLE 150
Query: 346 KRTVTVSLWNE-LATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPD 403
V ++LW + LA V +LL K + L V +++ + S + V + +
Sbjct: 151 GEKVKITLWGDILANMVDDDLLG---KQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDME 207
Query: 404 LPEAKKLKSWYESEGKGTSMASI-GSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEK 461
+P + ++ S + +E +M + S G++ + M+ +R +L IT S +K
Sbjct: 208 IPASMEILSRHNAEKVLPTMIEVDASTQGTIEE----QMFYNRKTLKEITELRYSNIQQK 263
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTC---NKKVTDALGSGYWCEGCQKNDEECSLRYIM 518
++KA I IK + WY +C C +K ++ Y C C K RY++
Sbjct: 264 EFICTVKAKIEEIKS-RNWWYMSCDKCFCGTRKESNV----YICNSCGKEAVNPKPRYVI 318
Query: 519 VARVCDGSGEAWISIFNEEAERIIG 543
+ D + +IFNEEAERI G
Sbjct: 319 NLEISDHTTRTTCTIFNEEAERIFG 343
>gi|391348893|ref|XP_003748675.1| PREDICTED: uncharacterized protein LOC100908191 [Metaseiulus
occidentalis]
Length = 292
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 19/236 (8%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYI 248
++ RV SK R+++ G +F+ + D QI + E Y + +G+ Y +
Sbjct: 52 VQGRVKSKTPARSWQRDGSRGEIFSFIVVDSTA-QINVIVAGEDCENVYKQINVGECYKL 110
Query: 249 SRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
S + N ++K + +E+ L++ S++EE +P+ + I E+ + + E
Sbjct: 111 SAFRQKPCNPKYKVTDHHFELQLSKISKIEEVPGND--LPRENVTSITIAEI-KSSSLKE 167
Query: 309 LVDIIGVVQNVSP--TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 366
V I +V VS T S R + E K++ + D+TKR +T++LW+E NVG+ L
Sbjct: 168 NVSINFIVYEVSEPQTFSCR---DGETRQKQNDVLEDDTKRIITLNLWSE---NVGE--L 219
Query: 367 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS----PDLPEAKKLKSWYESEG 418
D + I I+++ V +++G T T S PD +L W+E +G
Sbjct: 220 DGQEGRAI-NIENVSVREYKGKKNLTPTSGTAYKSARECPDDDRLSELTVWWEKDG 274
>gi|357510951|ref|XP_003625764.1| hypothetical protein MTR_7g104000 [Medicago truncatula]
gi|355500779|gb|AES81982.1| hypothetical protein MTR_7g104000 [Medicago truncatula]
Length = 307
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
H +S ++P + +WT+ V+V + YKN + F++EL D+ G I+ T+
Sbjct: 5 HNFISNVSPRKQSWTLVVKVVRAWFGQDYKNKK---LPFSMELGDQIGASIRRTL----I 57
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
KF ++ Q G V+ IS + N ++ + +Y++N N++V+ ++ T +P ++
Sbjct: 58 YKFKNQLQEGMVFTISSFNVASNNDLYRPSRKEYKLNFTINTKVKLSI--TVLVPTNVYS 115
Query: 294 FVP-IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
F P +D + + LVD+IGV+ V R N+
Sbjct: 116 FTPALDVFNEFYDNNYLVDVIGVMIGVGVEREYERDGENQ 155
>gi|391326949|ref|XP_003737971.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 290
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 128/268 (47%), Gaps = 18/268 (6%)
Query: 156 RDQNGNMAPAARLAMTRRVHPL--VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFN 213
+ ++ +P ++M ++ L V L Y G ++ RVTSK ++ + EG +F+
Sbjct: 20 KRKSNTTSPDCDVSMVKKTRFLKDVVLTRYGG--VLEGRVTSKTPIKEWSKNGKEGKLFS 77
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
+ DE +I + + + + Q+ Y I+ + N F + ++ E+ L++
Sbjct: 78 FLMADETA-RISVIVSGDKTDEVFSTIQVNHCYRITGFKPKPVNPHFSSTDHECEVTLSK 136
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
S+++E E IPQT+ I + + L+D+ ++ ++ P +I + + +
Sbjct: 137 ISKIKEI--ERDDIPQTQSLCSSIASI-LNIEKNCLIDLTAILFDLLPVQNITCR-DGSI 192
Query: 334 VPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLST 392
K+ + D++K+ V++ LWN+ E L + + P V+IKS+ V +F+G I L +
Sbjct: 193 QKKQTALLVDDSKKIVSLDLWNKHV-----EKLTDMEGCP-VSIKSITVKEFRGKIVLGS 246
Query: 393 LGRSTVLVSPDLPEAKK--LKSWYESEG 418
+ +T E +K K W+ + G
Sbjct: 247 MANTTFNDGEPTGETRKEYQKKWWLTGG 274
>gi|413932343|gb|AFW66894.1| hypothetical protein ZEAMMB73_049939 [Zea mays]
Length = 584
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 41/243 (16%)
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IG V +S +IR K KR +T+ +E+ + V LW AT+ AD
Sbjct: 29 DVIGAVTMISDVATIRTKMRQTQTAKRSVTIQNESCTPLEVVLWGGQATSF------PAD 82
Query: 371 KSPIVAIKSLKVGDFQGISLSTLGRSTVL---------VSPDLPEAKKLKSWYESEGKGT 421
+ I SL++ F G + +T L V+P +PEA L + + + +
Sbjct: 83 QISIAGQDSLQIIIFVGTLARSYAGTTSLTGGSSCKWYVNPQVPEATSLAASLQHK-RSP 141
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMW 481
M++ GS + R+S +K V + + ++++K DQ W
Sbjct: 142 IMSAAGS-----------TQRVPRISTAE--------HKKKVEWLVT--VTVLKIDQLWW 180
Query: 482 YRACKTCNKKVTDALGSGYWC--EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
Y +C+ C KK T G Y C GC + RY ++ D GE +F A+
Sbjct: 181 YESCRKCLKK-TKPHGDAYKCSDSGCGHVGPP-NPRYRLLITAGDEIGETDFILFGRMAQ 238
Query: 540 RII 542
RI+
Sbjct: 239 RIV 241
>gi|357441153|ref|XP_003590854.1| Replication factor A protein [Medicago truncatula]
gi|355479902|gb|AES61105.1| Replication factor A protein [Medicago truncatula]
Length = 518
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 150/346 (43%), Gaps = 30/346 (8%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + H + + + W IKVRV + + N V E GT+I A +
Sbjct: 1 MEKPFHSVSEIATGKDGWKIKVRVLRLWEVPAFLNPDQTNSV-------EMGTKIHAGVR 53
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ F + GKVY +S ++ + ++T + Y++ ++V+ V E A IP
Sbjct: 54 KQLLYVFQSKLSEGKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQ--VCEDASIPS 111
Query: 290 TKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+ I ++ ++ + + LVD++G + ++S R + +IT +
Sbjct: 112 FGISLCKIVDVCQHTSDHDYLVDVLGFMTDISAEREYVRDGKVTKMVVFEIT---DASGK 168
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRST-VLVSPDLPE 406
+L+ + + + + +A P++ ++ KV F+ SL + +T +L++ + +
Sbjct: 169 CECALFGQYVDTLNKLMGKSAGGMPMILVQFAKVKIFRDKASLQNVINTTWILINLPIEQ 228
Query: 407 AKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF-- 464
+++ K + S + + S+ + G+RS S +L F
Sbjct: 229 DDQVR-------KSVTFGS--TDVSSIPRIGSRSKVSLEEDFLRTYPKKTLEQLHSTFDD 279
Query: 465 --FSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKN 508
F + + IS + + WY ACK C++ V+ G+ ++C+GC K+
Sbjct: 280 GVFVVYSTISGLVDHEDWWYPACK-CHRSVSADSGA-FYCKGCAKH 323
>gi|343957969|emb|CCA30601.1| replication factor A protein 1 homolog, partial [Glomus etunicatum]
Length = 181
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 390 LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLT 449
LST + ++ +P LPEA +L WY + G S+ S G G+ ++ + SL
Sbjct: 3 LSTTNSTVLITNPSLPEATELSEWYSTGGSQLEFNSLASQTG-----GSINIKEAQKSLE 57
Query: 450 HITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKND 509
I S+ +LG +K + + Y+ + A V + L Y
Sbjct: 58 EIKSDKTLGLKK--ILAKRKYLEV----------AIIGVVIDVQNHLTPTY--------- 96
Query: 510 EECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEV 569
RYI+ R+ D S W++ F+E A I+G AD+ +L+ D Y+ +K
Sbjct: 97 -----RYILPIRITDHSDSVWMNCFDETAALILGMPADDFRKLRDI--DPYGYENHIKNQ 149
Query: 570 TWVPHLLRVSVAQQEYN 586
W L+V + +N
Sbjct: 150 LWSLTYLKVRTQLKTFN 166
>gi|115481338|ref|NP_001064262.1| Os10g0186800 [Oryza sativa Japonica Group]
gi|113638871|dbj|BAF26176.1| Os10g0186800 [Oryza sativa Japonica Group]
Length = 343
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 112/241 (46%), Gaps = 15/241 (6%)
Query: 174 VHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
VHP +G+W++ VRV K ++ + +R N+ L DE GT++ A ++++
Sbjct: 111 VHP-------RGSWSLGVRVYHKYHVERFAPSRKR---LNLVLLDEQGTKMVAIIYDDQV 160
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM--NLNENSEVEEAVNETAFIPQTK 291
+ + G YY+SR ++ A D+ ++ + E N I
Sbjct: 161 DRLDPLLREGSAYYVSRMSIEPARMILYQWLADHAFVCVFTRDTTITEIANMHEKILPLL 220
Query: 292 FNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
+P+D++ + ++ VD+IG+V VS + + + +P R+I + D + + V
Sbjct: 221 PPLMPLDQVFEFTYHNDIYVDVIGMVIFVSSIGFV--EGYKKRIPYRNILIIDGSFKPVM 278
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL 410
+ + +++ T+ + +++ PI+ L+ + SL T S V P++ A++L
Sbjct: 279 LVIKDKMLTDHLTKWARCSNEQPIIVATMLRAKREEDHSLHTTCFSRVQFDPNVAVAREL 338
Query: 411 K 411
+
Sbjct: 339 R 339
>gi|218198314|gb|EEC80741.1| hypothetical protein OsI_23219 [Oryza sativa Indica Group]
Length = 667
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 310 VDIIGVVQNVSPT---MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATN-VGQEL 365
+D+IG++ + P M + S + R+I + V ++LW ++ N V +L
Sbjct: 54 LDVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDL 113
Query: 366 LDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMA 424
L K + L V +++ + S + V + ++P + ++ S + +E +M
Sbjct: 114 LG---KQTVFIATGLLVKEYEKLLSFGVTSSTEVFLDMEIPASMEILSRHNAEKVLPTMI 170
Query: 425 SI-GSGLGSLAKNGARSMYSDRVSLTHITS-NPSLGDEKPVFFSIKAYISLIKPDQAMWY 482
+ S G++ + M+ +R +L IT S +K ++KA I IK + WY
Sbjct: 171 EVDASTQGTIEE----QMFYNRKTLKEITELRYSNIQQKEFICTVKAKIEEIKS-RNWWY 225
Query: 483 RACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
+C C T + Y C C K RY++ + D + +IFNEEAERI
Sbjct: 226 MSCDKCFCG-TRKESNVYICNSCGKEAVNPKPRYVINLEISDHTTRTTCTIFNEEAERIF 284
Query: 543 G 543
G
Sbjct: 285 G 285
>gi|222619510|gb|EEE55642.1| hypothetical protein OsJ_04010 [Oryza sativa Japonica Group]
Length = 321
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G + A + A KF Q KVY S+ + + +K N Y + L +
Sbjct: 20 LIDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLILPSKPAYKPFPNKYMIKLTPWT 79
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
VE+ A P FN V L V E D+IG++ VS +R S
Sbjct: 80 NVEQVNEVPADFPSHVFNLVQFSYLSLRVGMQEYFTDVIGMIIGVSKLAYVRMASKTSDT 139
Query: 335 PKRDITVADETKRTVTVSLWNELATN 360
PKR I + D V + LW E A +
Sbjct: 140 PKRVIALRDLANCEVKLVLWGEHAPD 165
>gi|357493169|ref|XP_003616873.1| hypothetical protein MTR_5g085220 [Medicago truncatula]
gi|355518208|gb|AES99831.1| hypothetical protein MTR_5g085220 [Medicago truncatula]
Length = 286
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
H +S ++P + +WT+ VRV + YKN + + ++ L D G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVPAWFGKDYKNKKLSFSM-DLVLIDRKGDRIGASIRRILI 63
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
KF ++ Q G V+ IS + + ++ +N+Y++N N++V+ +++T +P ++
Sbjct: 64 YKFKEQLQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVK--LSKTVLVPTNVYS 121
Query: 294 FVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
F P D + LVD+IGV+ V + R+ +RD T +
Sbjct: 122 FTPAPDVFNESYDNNCLVDVIGVMIGV----GVEREY------ERDSTYC------FKCT 165
Query: 353 LWNELATNVGQELLDNADKSPIVAIKSLKVGDFQG 387
L+ E ++ L ++ +VAI KV FQG
Sbjct: 166 LFGEYVEDMNSFLSSGESQNVVVAIMLTKVKLFQG 200
>gi|7529251|emb|CAB86481.1| putative protein [Arabidopsis thaliana]
Length = 269
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 16/241 (6%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
PL SL PY+ W I+V++ R Y GE + L DE G ++ A + E +K
Sbjct: 11 PLKSLKPYKNAWRIQVKLLHV--WRQYSVKAGES--IEMILVDEAGDKMYAAVRREQIKK 66
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAVNETAFIPQTKFN 293
F G I+ TL + +++ Y++ + V ++V++ F+ KF+
Sbjct: 67 FERCLTEGVWKIITTITLNPTSGKYRISDLKYKIGFVFKTTVSPCDSVSDALFLSLAKFD 126
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
+ L N L D++G V + S + +NN+ K D + D+ + +L
Sbjct: 127 VI----LSGSANSNILHDVMGQVVDRSEIQDL--NANNKPTKKIDFHLKDQHDTRLACTL 180
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPEAKKL 410
W + A V Q ++ D + I+ K+ D + +S ++ S V V P L E
Sbjct: 181 WGKYAEIVDQACQESTDGIVVCLIRFAKINLYNDSRSVS-NSFDVSQVFVDPTLAELALF 239
Query: 411 K 411
K
Sbjct: 240 K 240
>gi|77548273|gb|ABA91070.1| hypothetical protein LOC_Os11g01460 [Oryza sativa Japonica Group]
gi|125535492|gb|EAY81980.1| hypothetical protein OsI_37160 [Oryza sativa Indica Group]
Length = 567
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 32/321 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTY---KNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
L L W IKV+V MR + +A E ++ L DE G I A+++ +
Sbjct: 6 LSELTTRGHTWNIKVKV-----MRLWDSVNSATDELLSLDMILMDEQGDVIHASIWKKLI 60
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQ-FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKF 292
+ + VY G +V Q ++ V ND ++ N++V++ P+ F
Sbjct: 61 DNYKTQINESSVYVF--GNFKVQESQKYRPVCNDLKITFMYNTKVKQVKETAESFPEYYF 118
Query: 293 NFVPIDELGRYVNGTE-LVDIIGVVQNVSPT---MSIRRKSNNEMVPKRDITVADETKRT 348
+F ID L N + L D+IG++ + P M+ + N + R+I +
Sbjct: 119 DFASIDTLQDRANKDQHLSDVIGLLTRMKPIETRMTRKNTPNPRLAEIREIELLLLGGDK 178
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAK 408
+ ++LW +LA ++++ N + S V ++ G+SL + + + + + E
Sbjct: 179 IRLTLWGQLARFFSEDVIGNQTVV---IVTSTTVQEYIGLSLRSSSATRIYTNLHIRETW 235
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGAR--SMYSDRVSLTHITS----NPSLGDEKP 462
L SE M + + G R M+ +R +L IT NP G ++
Sbjct: 236 TLIDRQFSEETIPKMMEVDK-----STQGTREEQMFYNRKTLKDITEMRHGNP--GSQEF 288
Query: 463 VFFSIKAYISLIKPDQAMWYR 483
VF S K I ++ + WYR
Sbjct: 289 VFTS-KVTIDRVQENIQWWYR 308
>gi|297722973|ref|NP_001173850.1| Os04g0300175 [Oryza sativa Japonica Group]
gi|255675301|dbj|BAH92578.1| Os04g0300175 [Oryza sativa Japonica Group]
Length = 1718
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G I A +F + F GK+YY++ ++ NK ++ V N + ++L + +
Sbjct: 1444 LVDETGNSISAQIFPDINEIFEPLLTEGKIYYLAYYRVKPRNKIYRPVANKFAISLTKWT 1503
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
+VEE + + P + +E V+ + +D IGV+ ++ S+R + N
Sbjct: 1504 KVEEYLEPPSSFPSYVYTLKSFNEFPSLVDKKDSFIDTIGVITEITSITSVRSCTRNADS 1563
Query: 335 PKRDITVADETKRTV 349
KR++ + D KR++
Sbjct: 1564 LKRNVHMRD-AKRSI 1577
>gi|357467297|ref|XP_003603933.1| hypothetical protein MTR_3g116750 [Medicago truncatula]
gi|355492981|gb|AES74184.1| hypothetical protein MTR_3g116750 [Medicago truncatula]
Length = 203
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F++EL D G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVARAWFGQDYKNKK---LPFSMELVLIDRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + ++ +N+Y++N N++V+ +++T +P
Sbjct: 62 LIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P D + LVD+IGV+ V R D T R
Sbjct: 120 YSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYER---------------DGTYR-FK 163
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
+L+ E + L ++ +VAI KV FQG+
Sbjct: 164 CTLFGEYVEELNSFLSSGESQNVVVAIMLTKVKLFQGL 201
>gi|357519361|ref|XP_003629969.1| Replication factor A protein [Medicago truncatula]
gi|355523991|gb|AET04445.1| Replication factor A protein [Medicago truncatula]
Length = 296
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F++E L D G QI A++
Sbjct: 5 HDFISNVSPRKQSWTLVVRVVRAWFGQDYKNKK---LPFSMEFVLIDRKGDQIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + + ++ N+Y++N N++V+ +++T +P
Sbjct: 62 LIYKFKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVK--LSKTILVPINV 119
Query: 292 FNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P D + LVD+IGV+ V R+ K ++ D
Sbjct: 120 YSFTPAPDVFNESYDNNYLVDVIGVIIGVGVEREYEREGTKT---KMNVIELDSNGYRFK 176
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISL--STLGRSTVLVSPDLPEAK 408
+L+ E + L + ++ +VAI KV FQG + L + + +P++ E K
Sbjct: 177 CTLFGEYVEELNSLLSSDESQNVVVAIMLTKVKLFQGKPALQNALSSTRITFNPEIGETK 236
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGAR 439
+L+ K + S SGL L N +R
Sbjct: 237 ELR-------KSANTNSPASGLIQLP-NSSR 259
>gi|357464609|ref|XP_003602586.1| hypothetical protein MTR_3g095950 [Medicago truncatula]
gi|355491634|gb|AES72837.1| hypothetical protein MTR_3g095950 [Medicago truncatula]
Length = 203
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F++EL D G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQDYKNKK---LPFSMELVLIDRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + ++ +N+Y++N N++V+ +++T +P
Sbjct: 62 LIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P D + LVD+IGV+ V R D T R
Sbjct: 120 YSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYER---------------DGTYR-FK 163
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
+L+ E + L ++ +VAI KV FQG+
Sbjct: 164 CTLFGEYVEELNSFLSSGESQNVVVAIMLTKVKLFQGL 201
>gi|57834063|emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa Japonica Group]
Length = 2052
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G I A +F + F GK+YY++ ++ NK ++ V N + ++L + +
Sbjct: 1465 LVDETGNSISAQIFPDINEIFEPLLTEGKIYYLAYYRVKPRNKIYRPVANKFAISLTKWT 1524
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMV 334
+VEE + + P + +E V+ + +D IGV+ ++ S+R + N
Sbjct: 1525 KVEEYLEPPSSFPSYVYTLKSFNEFPSLVDKKDSFIDTIGVITEITSITSVRSCTRNADS 1584
Query: 335 PKRDITVADETKRTV 349
KR++ + D KR++
Sbjct: 1585 LKRNVHMRD-AKRSI 1598
>gi|413917703|gb|AFW57635.1| hypothetical protein ZEAMMB73_449704 [Zea mays]
Length = 459
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 20/247 (8%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDED------GTQIQATMF 229
P+ LNP + N I+VRV K R N G N+ L DE GT I A +
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFRGATN-DGPLRHINLILADEQVIIFFKGTAIHAEIP 63
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
A + Q+ KVY I + + FK V N+ + ++ + + P
Sbjct: 64 AALAIEKGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPI 123
Query: 290 TKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
+N +++ V N L+D+IG++ +S + +N+ +V RDI + D + +
Sbjct: 124 YIYNLTSFEKVEENVDNRNYLIDVIGMLTQISAPHVVGY-NNSSIV--RDIFIKDISDAS 180
Query: 349 VTVSLWNELATNVG-QELLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVSP 402
+ ++LW + A+ + + ++ PIV + VG F+G S LS +T +P
Sbjct: 181 LKITLWGDQASGFSINNVCNESNNKPIVI---MFVGCLAKQFKGQSYLSGTTATTWYFNP 237
Query: 403 DLPEAKK 409
++PEA++
Sbjct: 238 NIPEAQE 244
>gi|115473669|ref|NP_001060433.1| Os07g0642100 [Oryza sativa Japonica Group]
gi|113611969|dbj|BAF22347.1| Os07g0642100, partial [Oryza sativa Japonica Group]
Length = 145
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTEL-VDIIGVVQN 318
++ V N ++ + + +EE ++ + P F+ P ++ V+ VDI+GV+
Sbjct: 2 YRPVTNPLMISFTKWTTLEECIDASDDFPAITFSLTPFQDVPSLVDKNAFYVDIMGVITE 61
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNA--DKSPIVA 376
+ T ++R KS N KR + + D + T+ ++LW A E L NA K ++
Sbjct: 62 IGATDTLRPKSRNTETLKRTMQIWDASNSTLPITLWGNTAAAFNAEELYNAGQKKPQVIV 121
Query: 377 IKSLKVGDFQGISLSTLGRS 396
V +++GI L+ G S
Sbjct: 122 FVGTVVKNYKGIGLTLNGSS 141
>gi|413948244|gb|AFW80893.1| hypothetical protein ZEAMMB73_324862 [Zea mays]
Length = 455
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNP + N I+VRV K R N G N+ L DE GT I A + A +
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFRGATN-DGPLRHINLILADEQGTAIHAEIPAALATE 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY I + + FK V N+ + ++ + + P +N
Sbjct: 64 KGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
++ V N L+D+IG++ + + +N+ +V RDI + D + ++ ++LW
Sbjct: 124 SFQKVEENVDNRNYLIDVIGMLTQIGAP-HVAGYNNSSIV--RDIFIKDISDASLKITLW 180
Query: 355 NELATNVG-QELLDNADKSPIV 375
+ A+ + + ++ PIV
Sbjct: 181 GDQASGFSIDNVCNESNNKPIV 202
>gi|391336033|ref|XP_003742388.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 173
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 460 EKPVFFSIKAYISLIKPDQAMWYRAC--KTCNKKVTDALGSGYWCEGCQKNDEECSLRYI 517
+KP++ +A I++ + +M Y+AC + C KK D Y CE C + R +
Sbjct: 13 DKPLYLWNRATITMFNKETSM-YKACPNENCMKKAQDQGDGNYSCEKCATSGPNFKWRLV 71
Query: 518 MVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMK--LKEVTWVPHL 575
+ V D + + W + FNE+AE+I+G +A L + ++N +M + +
Sbjct: 72 LKMAVADATKQLWCTAFNEKAEQILGVTAATLGDYS----ENNPDEMDKIFADAMFKQFH 127
Query: 576 LRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEI 614
+ + Y +E+R V V V + + L +I
Sbjct: 128 FKFRGRMEVYQDERRFNTAVIDVKEVKLVDDCRHLANDI 166
>gi|308081030|ref|NP_001182790.1| uncharacterized protein LOC100500983 [Zea mays]
gi|195623976|gb|ACG33818.1| hypothetical protein [Zea mays]
Length = 305
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L P++ + I+V V+ K ++ A G + +V+ L+D +G I + A
Sbjct: 6 LPDLAPHKIHAKIQVHVSRKW---LFRGATDSGPLQHVDMVLSDREGNAIYVEIPGNLAE 62
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + G VY ISR + A FK V D + ++ V+ + P +
Sbjct: 63 QKATNIEEGGVYDISRFRVCAAKTVFKIVDGDKMIQFTFHTIVKRVTSPPTTFPLYVYRL 122
Query: 295 VPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
D + +V T VD++GV+ + + +S R I + D + +T+ ++L
Sbjct: 123 TSFDLIEPHVQTTNNFVDVLGVITEIHELTPVHVRSQLTQTVTRTIIIEDLSNKTMKITL 182
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVG----DFQGISLSTLGRSTVLVSPDLPEAK 408
W + A + +A+ + ++ + L VG F+G+ LS +P +PEA+
Sbjct: 183 WADQAIMFNLHDVYDANTNKLILV--LFVGCLPKFFKGVYLSGGPACRWYFNPTIPEAE 239
>gi|413933201|gb|AFW67752.1| hypothetical protein ZEAMMB73_289207 [Zea mays]
Length = 217
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 6/202 (2%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNP + N I+VRV K R N G N+ L DE GT I A + A +
Sbjct: 5 PITELNPQKINVVIRVRVIRKLEFRGATN-DGPLRHINLILADEQGTAIHAEIPAALAIE 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY I + + FK V N+ + ++ + + P +N
Sbjct: 64 KGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLT 123
Query: 296 PIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+++ V N L+D+IG++ + + +N+ +V RDI + D + ++ ++LW
Sbjct: 124 SFEKVEENVDNRNYLIDVIGMLTQIGAP-HVAGYNNSSIV--RDIFIKDISDASLKITLW 180
Query: 355 NELATNVGQE-LLDNADKSPIV 375
+ A+ + + + ++ PIV
Sbjct: 181 GDQASGFSIDNVCNESNNKPIV 202
>gi|357488629|ref|XP_003614602.1| hypothetical protein MTR_5g056060 [Medicago truncatula]
gi|355515937|gb|AES97560.1| hypothetical protein MTR_5g056060 [Medicago truncatula]
Length = 251
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M+ + + + +++P + +WT+ V+V + YKN + F++EL D+ G I+ T+
Sbjct: 1 MSTKHNFIFNVSPRKQSWTLVVKVVRAWFGQDYKNKK---LPFSMELGDQIGASIRRTL- 56
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
KF ++ Q G V+ IS + + ++ + +Y++N N++V+ ++ T +P
Sbjct: 57 ---IYKFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSI--TILVPT 111
Query: 290 TKFNFVPI-DELGRYVNGTELVDIIGVVQNV 319
++F P D + + LVD+IGV+ V
Sbjct: 112 NVYSFTPAPDVFNEFYDNNYLVDVIGVMIGV 142
>gi|12320966|gb|AAG50611.1|AC079605_16 unknown protein [Arabidopsis thaliana]
Length = 244
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV-FNVELTDEDGTQIQATMFNEAA 233
H L L+P WTI V V +R YK + L DE GTQI+AT+ +
Sbjct: 5 HHLYELSPMVTGWTICVMV-----LRIYKKILNPNAFELRLVLADEWGTQIEATIGPRFS 59
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV-NETAFIPQTKF 292
++DR + + I+ +R + KT + + + +++ V + ET + +
Sbjct: 60 AFYFDRIKENQWKTITTFLVRPNCEAIKTTPHQFRILFMDHTIVTSSTPRETGLLNK--- 116
Query: 293 NFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F P D + V G + LVD+IG + NV + N+ K T+ D+ K T+
Sbjct: 117 -FTPFDYIVDDVVGNDTLVDVIGALVNVGIMTNTASNENDMAGFKLPFTIMDKNKDTLVC 175
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
+ E+A ++ + + ++A+ K+ F
Sbjct: 176 EAYGEIAVDLEKRFRAFRKNNVVIALAWWKIIRF 209
>gi|308044459|ref|NP_001183770.1| hypothetical protein [Zea mays]
gi|238014442|gb|ACR38256.1| unknown [Zea mays]
gi|414880632|tpg|DAA57763.1| TPA: hypothetical protein ZEAMMB73_842237 [Zea mays]
Length = 373
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 148/377 (39%), Gaps = 48/377 (12%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAA 233
PL +L + I++ V K R A G + +++ LTD G I + + A
Sbjct: 18 PLSALTLQDRDIEIQIEVHRKWEFR---GAIDNGPILHIDMILTDCIGNAIHCQIPSFPA 74
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
K D FQ+GK+Y +SR + A +K V D M L +++ NE P +
Sbjct: 75 AKRGDEFQVGKIYKMSRFPVARAKSSYKPVDGDL-MFLTSYDKIDP--NE----PNAR-- 125
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
N +++ II + + P + R S+ R + + + + + ++L
Sbjct: 126 -----------NFHDVISIITEISAIKPVGNARIPSSY----NRHVLIKNLSDSILKITL 170
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVG----DFQG-ISLSTLGRSTVLVSPDLPEAK 408
W + A L + D + L VG +FQG + LS +P + EA
Sbjct: 171 WGKRAQEF--YLTNTYDPQKQTLVIVLFVGCLPKEFQGEVLLSGGAAYHWYFNPSIEEAT 228
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS-LGDEKPVFFSI 467
+ ESE + S+ + + R + + L NP + DE +
Sbjct: 229 AFYNKIESEKINIELPSLDGQEITPPQLPQREHHDLKYIL---PLNPHDVPDEG---YEC 282
Query: 468 KAYISLIKPDQAMWYRACKTC-NKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGS 526
I+ I + +Y AC TC NK D + C C + RY + + DG+
Sbjct: 283 TVTITSIPEGKTWYYIACNTCPNKPSIDPIIRQ--CSTC--GSTKYCFRYKLTFKASDGT 338
Query: 527 GEAWISIFNEEAERIIG 543
EA + F+ A IIG
Sbjct: 339 AEAEMFAFDTVARTIIG 355
>gi|392889706|ref|NP_494734.3| Protein R03H10.7 [Caenorhabditis elegans]
gi|351062334|emb|CCD70304.1| Protein R03H10.7 [Caenorhabditis elegans]
Length = 359
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 25/225 (11%)
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL 271
FN E+TD +G I + + A FY + YY++ G ++ ++ + DY+++L
Sbjct: 148 FNFEITDFNGDTIACSASSPEADVFYQNLVKEQSYYLAGGHIKKGHEIYNQTGIDYQIDL 207
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGV------VQNVSPTMSI 325
N + +E A + KFN + L N + +D++ V+N +PT
Sbjct: 208 NNFTIMEPA---PTLLTLPKFNIQRV-FLSDVANVKKPIDVLVCIKEFKDVENYTPT--- 260
Query: 326 RRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
N+ KR I V D++K + + W A + +E N +VA K + +
Sbjct: 261 ----ENKPPHKRHIQVIDDSKSEIRATFWGYNAVDAIREEFLNK----VVAFKGVIPTEG 312
Query: 386 QG-ISLSTLGRSTVLVSPDLPEAKKLKSW---YESEGKGTSMASI 426
G + LS + +++ P++ A L++W Y + G T+++ I
Sbjct: 313 NGQLFLSITPGTRIVIQPEVDGAAYLEAWFDGYNARGAITTISQI 357
>gi|27817863|dbj|BAC55631.1| hypothetical protein [Oryza sativa Japonica Group]
gi|42409189|dbj|BAD10455.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 472
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 210 CVFNVE--LTDEDGTQIQATMFNEAARKFYDRFQLGKVY-YISRGTLRVANKQFKTVQND 266
+FN++ + DE+GT +Q T+ + +F LG VY ++ T+ + NK++
Sbjct: 8 TIFNIDGVILDEEGTMVQFTIPKKLENEFRPSLTLGCVYMFVDVNTVDIKNKKYIYHHQK 67
Query: 267 YEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIR 326
Y + +++V + + IP F F P D++ ++ +IGV+ +V P
Sbjct: 68 YMLQFKSSTKVHHLESRGSSIPNYGFEFCPFDQIPSKSGISK--PLIGVISHVGP-YDYA 124
Query: 327 RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE--LLDNADKSPIVAI-KSLKVG 383
K++++ K I DE ++ + LW E + + L + D +VAI L G
Sbjct: 125 GKTSSKKNRKLKIRSKDEQEQEIV--LWGEYGGSFDEAFVLQKSTDHKIVVAILAGLTAG 182
Query: 384 DFQGISLSTLGRST-VLVSPDLPEAKKLKSWYE 415
+ G + +T +T + D+ E + +S Y+
Sbjct: 183 TYLGKTEATSSSATQIYFDSDITEIAEYQSSYQ 215
>gi|224138504|ref|XP_002326619.1| predicted protein [Populus trichocarpa]
gi|222833941|gb|EEE72418.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 146/350 (41%), Gaps = 26/350 (7%)
Query: 207 GEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFK-TVQN 265
G+ FN D G IQ + + + F G Y I+ G N+ V +
Sbjct: 31 GQTSSFNCLFADNMGNAIQGSAKGKDIQLFATSIIEGDYYQIN-GFYTYENRYTNFVVAH 89
Query: 266 DYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMS 324
+ ++L ++++ T +P+ FNF+ L G+ L+D++G ++ + P
Sbjct: 90 EVVIDLKSDTKIARLNPLTPQVPRHYFNFIDFAHLLTKEKGSRTLIDVLGRLKAIQPLEQ 149
Query: 325 IRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD 384
+ + ++ K++ + + + ++LW ++A + +L IV +V +
Sbjct: 150 VLVRGQ-DITDKKEFIIENIMGDELRITLWGDVAKSFDDFVLHEHTNPIIVVFAGFRVTE 208
Query: 385 FQG-ISLSTLGRSTVLVSPDLPEAKKLKSWY-----ESEGKGTSMASIGSGLGSLAKNGA 438
F+G +L++ S +P++PE K Y E SM ++ S + +N
Sbjct: 209 FKGKPNLASTVASFWYFNPEIPEILPYKHHYNQLPVEVYQLPASMNAVRSIEQQINEN-- 266
Query: 439 RSMYSDRVSLTHITS-NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALG 497
R ++ I +P + K + KA I+ + WY++C C K ++D G
Sbjct: 267 ------RKTIKEILCMDPY--EHKSERCTYKASIADYDLHRGWWYQSCPLCTKSLSDK-G 317
Query: 498 SGYWCEGCQKNDEECSLRYIMV-ARVCDGSGEAWISIFNEEAERIIGCSA 546
+ + C +++E + + V V DG+ A + + E G SA
Sbjct: 318 TIF---RCIEHNEVTPVPWFKVDCIVTDGNDVATFLMVGKTVENFFGSSA 364
>gi|322783921|gb|EFZ11105.1| hypothetical protein SINV_13954 [Solenopsis invicta]
Length = 301
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 30/152 (19%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LN IK R K ++ + N R G F + L D G +I T F + K
Sbjct: 147 PIAKLNGRDSG-VIKAREIEKSQVKLWNNNRRRGKYFFITLIDASG-KISCTAFQDMVDK 204
Query: 236 FY----------------DR-----------FQLGKVYYISRGTLRVANKQFKTVQNDYE 268
F+ DR Q+G VY++SR L+ A+K+F T +N+YE
Sbjct: 205 FFNLIVVSVPCAESDVSDDRANLPFQPFHLILQVGNVYHVSRCHLKKADKRFNTTKNNYE 264
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDEL 300
+ ++ + +E + + +P FNF I+++
Sbjct: 265 LIVHFFTRLEPCHDHYS-VPTIWFNFSTINQI 295
>gi|7801661|emb|CAB91582.1| putative protein [Arabidopsis thaliana]
Length = 448
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 20/225 (8%)
Query: 336 KRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI-SLS-TL 393
K + + DET + +LW A + + D+ I ++ +K+ ++G+ +LS +
Sbjct: 84 KIEFELHDETDERIGCTLWGTFAEQIFRACQDSNRGMVICILRFVKIKSYKGVRTLSNSF 143
Query: 394 GRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS 453
+ V V+P EA + S+G + + R S++ +
Sbjct: 144 DVTQVHVNPPSSEAVFFQQALPSDGLSLISRERQPRWEMVVNKDVDWLDYLRNSISDLKC 203
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSG------------YW 501
+ +G + V +I A I D A +Y +CKTCNKKV + + +G +W
Sbjct: 204 SIEIGKAR-VLCTIYA----IDTDWAWYYISCKTCNKKV-NHIHAGVHGVNNKGKKPRFW 257
Query: 502 CEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 546
C+ C+ RY++ A V D +GEA +F+ + G SA
Sbjct: 258 CDTCKTVVTNVIPRYMLYANVMDNTGEAKFLLFDSICSELTGESA 302
>gi|348666728|gb|EGZ06555.1| hypothetical protein PHYSODRAFT_380579 [Phytophthora sojae]
Length = 68
Score = 55.5 bits (132), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W+ R+ ++ +RT+K+ R G +F TD DG ++ T+FNE A +F+D G V
Sbjct: 1 WSFIGRILARSPVRTFKSWRASGRLFRAHFTDRDGATLRVTVFNEGAERFFDVLSPGAVC 60
Query: 247 YISRGTLR 254
S G ++
Sbjct: 61 SFSNGRIK 68
>gi|57899245|dbj|BAD87490.1| replication protein-like [Oryza sativa Japonica Group]
Length = 269
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 185 GNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQL 242
GN T+ VRV+ + Y + EG + ++ L E G I A ++ +KF
Sbjct: 14 GNPTLLVRVS---RLWEYHDQDDEGDLRHIGLVLVGEKGYAIAAMIYPPWGKKFKPLISE 70
Query: 243 GKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR 302
GKVY ++ ++ K ++ V N +N + +EE V+ A + P EL
Sbjct: 71 GKVYLLTYYRVKPCTKHYRPVDNKMMINFTRWTGIEEYVDVQAGFGHYAYTLTPYQELRS 130
Query: 303 YVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDI 339
V+ + D+IGV+ ++S ++R + + KR++
Sbjct: 131 RVDRKDSFTDVIGVITDISSVTTVRTRVRDSDSLKRNV 168
>gi|414871008|tpg|DAA49565.1| TPA: hypothetical protein ZEAMMB73_072047 [Zea mays]
Length = 259
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L Y+ + I+V V+ K + + A G + +++ L+D G + A + A
Sbjct: 12 LPDLTTYKKHAIIQVHVSRKWS---FHGATENGPLQHIDMVLSDCKGNSMYAEIPANLAE 68
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + ++Y ISR + A +K + D + + ++ A N P +
Sbjct: 69 EKGALIETNQIYDISRFRVTAAKTAYKPIDGDKMIQFTIYTIIKPASNPPPTFPLYIYQL 128
Query: 295 VPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
P DE+ + + T+ +D++G + V+ + + RD+ + D +++T ++L
Sbjct: 129 TPFDEIESQIQHKTKFLDVLGTITEVTALKIVHIEGQLSPTIIRDVMIEDLSRKTHKITL 188
Query: 354 WNELATNVG-QELLDNADKSPIVAI 377
W + AT+ Q + D K PI+A+
Sbjct: 189 WAKRATSFTIQNVYDPISKKPILAL 213
>gi|9989044|gb|AAG10807.1|AC018460_1 Hypothetical protein [Arabidopsis thaliana]
Length = 252
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV-FNVELTDEDGTQIQATMFNEAA 233
H L L+P WTI V V +R YK + L DE GTQI+AT+ +
Sbjct: 5 HHLYELSPMVTGWTICVMV-----LRIYKKILNPNAFELRLVLADEWGTQIEATIGPRFS 59
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV-NETAFIPQ-TK 291
++DR + + I+ +R + KT + + + +++ V + ET + + T
Sbjct: 60 AFYFDRIKENQWKTITTFLVRPNCEAIKTTPHQFRILFMDHTIVTSSTPRETGLLNKFTP 119
Query: 292 FNFVPIDELGRY----VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
F+++ D +G ++ L+D+IG + NV + N+ K T+ D+ K
Sbjct: 120 FDYIVDDVVGNDTLVDISNISLIDVIGALVNVGIMTNTASNENDMAGFKLPFTIMDKNKD 179
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
T+ + E+A ++ + + ++A+ K+ F
Sbjct: 180 TLVCEAYGEIAVDLEKRFRAFRKNNVVIALAWWKIIRF 217
>gi|297727013|ref|NP_001175870.1| Os09g0456900 [Oryza sativa Japonica Group]
gi|255678952|dbj|BAH94598.1| Os09g0456900 [Oryza sativa Japonica Group]
Length = 206
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 171 TRRVHPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGT--QIQAT 227
T+ V L+S L P GN TI++RV+ +++ E ++++ L DGT I A
Sbjct: 13 TKMVTTLISKLEPGLGNPTIRLRVS---RFWEFRDQNDENILYHLGLVLVDGTGASIAAQ 69
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
+ F GKVY ++ +R Q++ V N + L + S +EE +
Sbjct: 70 IMPPLDELFAPAITEGKVYDLTFYRVRQCTSQYRPVGNMQSIALTKWSTLEECTDVPENF 129
Query: 288 PQTKFNFVPIDEL-GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
P ++ P D+L GR D IG++ ++ I+ ++ + KR I + D
Sbjct: 130 PNYVYSLTPYDQLRGRVNRKDSFTDAIGIITEITSVTPIQTRTKDGESLKRSIYIRD 186
>gi|357517787|ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355523204|gb|AET03658.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 604
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 164/422 (38%), Gaps = 27/422 (6%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + P+ ++ + N ++VRV + + N E ++ L DE +IQ T+
Sbjct: 1 MAPIITPVSAIVAGRINIRLRVRVVHVWTIPEF-NRPQEDSAMHLLLLDEKFGKIQLTVK 59
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAVNETAFI 287
+ G Y + + + ++ T + + ++ ++ EA+N I
Sbjct: 60 KHLIPMIKSVVEEGAAYMLDNVLVTRNDPKYGTTNHKWRLDFLHKTKFNKIEALN----I 115
Query: 288 PQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
PQ F+FV E+ ++D+IG V V + ++ N D+T+ D R
Sbjct: 116 PQNHFDFVSFAEILDSDREERIIDVIGHV--VERDVMKDKEVNGRTSKLLDLTLQDSESR 173
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAI-KSLKVGDFQGISLSTLGRST------VLV 400
+ SLW A + + SP++ I + K+ + ST+G S ++V
Sbjct: 174 RIHCSLWATYAERMTSFFATHEANSPVIVIMQQCKLKSY----CSTMGVSNAFYGIKLIV 229
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDE 460
D+ E + KS E + G+ + + + D + +T L
Sbjct: 230 DGDIAEVSEYKSKINGEE-----VQVTQGISQSSASSIVPLVDDMLQSHRMTIEDLLDAS 284
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
+ + A + I+ + +Y+AC C +V G +C C R+ +
Sbjct: 285 EKCNGIVLATVCDIEKEFNWYYQACTKCAGRVKTIAGR-LFCPKCNTGRNAVP-RFKVHL 342
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSV 580
+V D +G +F+ +G S +L + ++Q + + + + L +V V
Sbjct: 343 QVMDNTGSTSFILFDRNVSNYVGKSVQDLIQQQAQQKNADDFPAEFDTFYGKQMLFKVEV 402
Query: 581 AQ 582
A+
Sbjct: 403 AE 404
>gi|9758809|dbj|BAB09262.1| replication protein A1-like [Arabidopsis thaliana]
Length = 252
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV-FNVELTDEDGTQIQATMFNEAA 233
H L L+P WTI V V +R YK + L DE GTQI+AT+ +
Sbjct: 5 HHLYELSPMVTGWTICVMV-----LRIYKKFLNPNAFELRLVLADEWGTQIEATIGPRFS 59
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV-NETAFIPQ-TK 291
++DR + + I+ +R + KT + + + +++ V + ET + + T
Sbjct: 60 AFYFDRIKENQWKTITTFLVRPNCEAIKTTPHQFHILFMDHTIVTSSTPRETGLLNKFTP 119
Query: 292 FNFVPIDELGRY----VNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
F+++ D +G ++ L+D+IG + NV + N+ K T+ D+ K
Sbjct: 120 FDYIVDDVVGNDTLVDISNISLIDVIGALVNVGILTNTASNENDMAGFKLPFTIMDKNKD 179
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
T+ + E+A ++ + + ++A+ K+ F
Sbjct: 180 TLVCEAYGEIAVDLEKRFRAFRKNNVVIALAWWKIIRF 217
>gi|308080968|ref|NP_001183010.1| uncharacterized protein LOC100501330 [Zea mays]
gi|238008768|gb|ACR35419.1| unknown [Zea mays]
Length = 439
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 120/301 (39%), Gaps = 45/301 (14%)
Query: 269 MNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRR 327
+ LN+ + V E ++ P+ F+ P+D+L +Y N T+ +D+I + VS +
Sbjct: 2 VKLNKRTIVLEDKDQIQGFPKYTFSLTPLDKLDQYKNKTDRFIDVIAKISGVSNVAKVPT 61
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNV-GQELLDNADKSPIVAI-----KSLK 381
S ++ + +R + + D + +SL + A G ++LD + ++AI L
Sbjct: 62 TSGDQQM-RRVVLLEDLKGNMIELSLSGKRALEFDGDQVLDVGQQHHVIAIFVGTLVKLY 120
Query: 382 VGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGS--------- 432
G++ +S ++ R WY +E + + L S
Sbjct: 121 KGEYTFLSGTSACR-----------------WYINENDIAEIKAFQKSLPSEPVPIKKTY 163
Query: 433 LAKNGARSMYSDRV--SLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNK 490
L + A + ++ L H+ +G + A I I +Q Y+ACK CN
Sbjct: 164 LQNDDATHKFEEKSLEQLKHVDPFLDMGQR----YQCTATIIGITENQTWCYKACKICNS 219
Query: 491 KVTDALGSGYWC--EGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADE 548
+ +GY C EGC E + +A D + F ++ +IG SA
Sbjct: 220 AIIQK-ENGYKCTKEGCPSTQFEWKYKIPFIA--SDHTYNLEFMFFEKKGMELIGKSAST 276
Query: 549 L 549
L
Sbjct: 277 L 277
>gi|297790618|ref|XP_002863194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309028|gb|EFH39453.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 508
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 145/355 (40%), Gaps = 54/355 (15%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDR 239
LNP + W ++ +V R + R L D +G +IQ +++ E KF
Sbjct: 13 LNPSKYEWVVETKVLCSWTRRLENSGRR----LEFVLADREGNKIQCSLWGEVYDKFVSV 68
Query: 240 FQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEE--AVNETAFIPQTKFNFVPI 297
G + I + + + Y+M L +N+ + + ++ F F+FV
Sbjct: 69 IVSGSWFRIKDFKVVHQTGDCRATLHRYKMILLKNTTIVKIPGIDNNQF-----FDFVDF 123
Query: 298 DE-LGRYVNGTELVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
L R + LV++IG + NV P + IR KS PK D+ + D + +LW
Sbjct: 124 GSILDRRYSDDFLVNVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICTLW 179
Query: 355 NELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAKKL 410
+ A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P +
Sbjct: 180 ADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVDEF 236
Query: 411 KSWYESEG-----KGTSMASIGSGLG----SLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
+S ++G S GS + L KN R++ D V +L +
Sbjct: 237 RSGLPTDGVVLTNHDNSELFAGSTVSIRDQFLVKNHKRTV-RDIVE--------ALEEGM 287
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKV--------TDALGSGYWCEGCQKN 508
V I + ++ +Y +CK CNK V D Y+C C K+
Sbjct: 288 CVAMVI---VGSVERTSKWYYVSCKMCNKSVEPYPENSGDDGKPPLYYCGVCDKD 339
>gi|357510051|ref|XP_003625314.1| hypothetical protein MTR_7g093810 [Medicago truncatula]
gi|355500329|gb|AES81532.1| hypothetical protein MTR_7g093810 [Medicago truncatula]
Length = 203
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F++EL D G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQDYKNKK---LPFSMELVLIDRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q V+ IS + ++ +N+Y++N N++V+ +++T +P
Sbjct: 62 LIYKFKNQLQERMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P D + LVD+IGV+ V R D T R
Sbjct: 120 YSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYER---------------DGTYR-FK 163
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
+L+ E + L ++ +VAI KV FQG+
Sbjct: 164 CTLFGEYVEELNSFLSSGESQNVVVAIMLTKVKLFQGL 201
>gi|241679380|ref|XP_002412649.1| replication factor A 1, rfa1, putative [Ixodes scapularis]
gi|215506451|gb|EEC15945.1| replication factor A 1, rfa1, putative [Ixodes scapularis]
Length = 217
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 60/248 (24%)
Query: 166 ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ 225
+R ++ V P+ SL + WTI+ RVT K ++ + + +F+VEL DE
Sbjct: 4 SRADYSKVVVPISSLGRFSDRWTIRARVTHKSSI----HPKDGLYMFSVELRDESAEINA 59
Query: 226 ATMFNEAAR--KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
M N + FY++ QL KVYYIS
Sbjct: 60 MVMSNRCCKWVGFYEKIQLNKVYYIS---------------------------------- 85
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVAD 343
+ +L R N +DIIG+ + + +R I + D
Sbjct: 86 ------------GVKDLQR-TNKDTAIDIIGIGECTEKSDDCFEPPYTGQEARRTIWITD 132
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
T R V ++L+ + N + +VA+K ++G +SL + V+PD
Sbjct: 133 HTGR-VQLTLYGDQVERF------NGRHAAVVAVKGARLGVSDELSLHMCRWGHIEVNPD 185
Query: 404 LPEAKKLK 411
LP A L+
Sbjct: 186 LPAADSLR 193
>gi|297724803|ref|NP_001174765.1| Os06g0329200 [Oryza sativa Japonica Group]
gi|255677008|dbj|BAH93493.1| Os06g0329200 [Oryza sativa Japonica Group]
Length = 225
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 189 IKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVY 246
IK R++ + + + E +++ EL DE G I ++ KF D Q GKVY
Sbjct: 81 IKTRLS---RLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLLQQGKVY 137
Query: 247 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
YI ++R AN+ ++ V N ++ + + +EE + P F+ P ++ V
Sbjct: 138 YIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPFQDVPSLV 195
>gi|294876753|ref|XP_002767785.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869630|gb|EER00503.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 143
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 163 APAARLAMTRRV-----HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVEL 216
+P R A RR L+S L +W ++ RV SK + + + GE +F+ +
Sbjct: 15 SPHPRRASVRRTSQPYSRTLISNLRVGSTDWCLRGRVVSKSEI--FGISTGE--LFHAHI 70
Query: 217 TDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSE 276
+DED ++ F+EAA F+D Q+G +YY G + A+ +F + D E+ + ++
Sbjct: 71 SDEDSNTVKLLFFDEAAHIFHDSIQIGAIYYFRNGKVLRAHSKFNK-EADVEIKFDTSAV 129
Query: 277 VEEA 280
+E A
Sbjct: 130 IEAA 133
>gi|242086609|ref|XP_002439137.1| hypothetical protein SORBIDRAFT_09g001220 [Sorghum bicolor]
gi|241944422|gb|EES17567.1| hypothetical protein SORBIDRAFT_09g001220 [Sorghum bicolor]
Length = 388
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACK------TCNKKVTDALGSGYW-CEGCQKNDEECS 513
KP F++KA +S++ +++ Y AC CN +T G +W C+ C C
Sbjct: 173 KPELFTVKAILSVMN-SESLCYAACPLVVNGYQCNGAITSN-GYEWWNCDECSMTFAACD 230
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVP 573
RY + ++ D +GE + + E I G +A EL +K + D Y + V
Sbjct: 231 YRYKIFVQLADSTGEIYATTSQAVGEEIFGQTARELYLVKYEKQDHAQYNKIVMGVQNCE 290
Query: 574 HLLRVSVAQQEYNNE 588
+LL V + + +++E
Sbjct: 291 YLLEVKLNLEAFSDE 305
>gi|87241182|gb|ABD33040.1| Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula]
Length = 224
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F++EL D G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQNYKNKK---LPFSMELVLIDRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + ++ +N+Y++N N++V+ +++T +P
Sbjct: 62 LIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P + + LVD+IGV+ V R D T R
Sbjct: 120 YSFTPAPNVFNESYDNNYLVDVIGVMIGVGVEKEYER---------------DGTYR-FK 163
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
+L+ E + L ++ +VAI KV FQ
Sbjct: 164 CTLFGEYVEELNSFLSSGESQNVVVAIMLTKVKLFQAF 201
>gi|76800811|ref|YP_325819.1| replication factor A [Natronomonas pharaonis DSM 2160]
gi|76556676|emb|CAI48248.1| replication protein A [Natronomonas pharaonis DSM 2160]
Length = 467
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
SL+ Q + T++ V +RT+ G EG V N+ L DE G +I+ T+++E A +
Sbjct: 167 SLSMGQSDVTLRGVVLDTDAVRTFDRDDGSEGRVSNLTLGDETG-KIRVTLWDEQADR-A 224
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ-TKFNFVP 296
+ + G+ I G +R + D E++ S+++E F+P T + +
Sbjct: 225 EALEAGQSVEIVDGYVR-------EREGDLELHAGSRSDIDELDESVEFVPDATDIDSIA 277
Query: 297 IDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
IDE VDI GVV++ P + R +E R++ + D T + V+LW E
Sbjct: 278 IDET---------VDIAGVVRSADPKRTFDRDDGSEG-QVRNVRLQDNTG-DIRVALWGE 326
Query: 357 LA 358
A
Sbjct: 327 KA 328
>gi|218199233|gb|EEC81660.1| hypothetical protein OsI_25208 [Oryza sativa Indica Group]
Length = 376
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L +N + NW IKVRV ++ R + + L +E+G I A + +KF
Sbjct: 6 LSQINSTRHNWRIKVRVARSWHLSGTSKGR-DFTALELILVNEEGVGITACVGENEIQKF 64
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE-TAFIPQTKFNFV 295
G Y++ + K+ V + Y + + VEE E + +P FNFV
Sbjct: 65 STSIVEGHAYFLRNFRVSRQTKKLNAVPSTYVIFFTPWTIVEEIPTEISGSLPLYIFNFV 124
Query: 296 ---PIDELGRYVNGTELVDIIGVVQNVSPTM--------SIRRKSN-NEMVPKRDITVAD 343
+DE R+ NG LVD+IG + V P + S+RR ++ K ++ + D
Sbjct: 125 DFEDLDERARHPNG--LVDVIGQLTVVHPLVQSNGLNGPSVRRNVELRDLSYKLNVVIED 182
Query: 344 ETKR 347
T R
Sbjct: 183 STGR 186
>gi|357509383|ref|XP_003624980.1| hypothetical protein MTR_7g089660 [Medicago truncatula]
gi|355499995|gb|AES81198.1| hypothetical protein MTR_7g089660 [Medicago truncatula]
Length = 236
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F++EL D G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQNYKNKK---LPFSMELVLIDRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + ++ +N+Y++N N++V+ +++T +P
Sbjct: 62 LIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P + + LVD+IGV+ V R D T R
Sbjct: 120 YSFTPAPNVFNESYDNNYLVDVIGVMIGVGVEKEYER---------------DGTYR-FK 163
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGI 388
+L+ E + L ++ +VAI KV FQ
Sbjct: 164 CTLFGEYVEELNSFLSSGESQNVVVAIMLTKVKLFQAF 201
>gi|297797958|ref|XP_002866863.1| hypothetical protein ARALYDRAFT_912430 [Arabidopsis lyrata subsp.
lyrata]
gi|297312699|gb|EFH43122.1| hypothetical protein ARALYDRAFT_912430 [Arabidopsis lyrata subsp.
lyrata]
Length = 244
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 28/234 (11%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSP 402
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDP 233
>gi|242073416|ref|XP_002446644.1| hypothetical protein SORBIDRAFT_06g019670 [Sorghum bicolor]
gi|241937827|gb|EES10972.1| hypothetical protein SORBIDRAFT_06g019670 [Sorghum bicolor]
Length = 118
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%)
Query: 204 NARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTV 263
N E ++ L D G I A + +A + GK+ Y+S+ T++ A +++ V
Sbjct: 8 NEENEIIHLDLVLIDSMGVSIYAEIPRDAVPYLKPYLEEGKIVYMSKITVQTAKPEYRAV 67
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGT 307
+N + LN+ +++ +A N+ P+ F+ +PI++L Y T
Sbjct: 68 ENPCMIKLNKRTQIRDAHNQPPDFPKYTFSLIPIEKLLDYAKST 111
>gi|333988515|ref|YP_004521122.1| Replication factor-A domain-containing protein [Methanobacterium
sp. SWAN-1]
gi|333826659|gb|AEG19321.1| Replication factor-A domain protein [Methanobacterium sp. SWAN-1]
Length = 798
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 480 MWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAE 539
+ Y C CNK+VT + + Y C+ C + E + I+ V D +G + F AE
Sbjct: 678 ILYEMCPNCNKRVTFS-DNAYICDICGEEIENPNYLMIISCVVEDDTGTMRTTFFRTAAE 736
Query: 540 RIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+IG + DE+ ++ + GD+ S + K++++ + + EYN E R
Sbjct: 737 ELIGMNTDEVRDVIEKTGDEGSLEEKVEDLVGQEITIIADASFDEYNEEIR 787
>gi|413943162|gb|AFW75811.1| hypothetical protein ZEAMMB73_150897 [Zea mays]
Length = 228
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 26/240 (10%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
P+ LNP + N I+VRV K R N G N+ L DE GT I A + A +
Sbjct: 5 PITELNPQKINVVIRVRVIRKWEFRGATN-DGPLRHINLILADEQGTTIHAEIPAALATE 63
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
Q+ KVY I + + FK V N+ + ++ + + P +N
Sbjct: 64 KGSLIQIDKVYEIRHFRVMPSRGYFKPVHNNLMIQFTLYTQAKVVNDPPHIFPIYIYNLT 123
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
+++ V+ + I +N+ +V RDI + D + ++ ++LW
Sbjct: 124 SFEKVEENVDNRNYL--------------IAGYNNSSIV--RDIFIKDISDASLKITLWG 167
Query: 356 ELATNVG-QELLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVSPDLPEAKK 409
+ A+ + + ++ PIV + VG F+G S LS +T +P++PEA++
Sbjct: 168 DQASGFSIDNVCNQSNNKPIVI---MFVGCLAKQFKGQSYLSGTTATTWYFNPNIPEAQE 224
>gi|414590352|tpg|DAA40923.1| TPA: hypothetical protein ZEAMMB73_767937 [Zea mays]
Length = 212
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 244 KVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
++Y ISR + A +K + D + + ++ N P + P DE+
Sbjct: 31 QIYDISRFRVTAAKTAYKPIDGDKMIQFTIYTIIKPGSNPPPTFPLYIYQLTPFDEIESQ 90
Query: 304 V-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG 362
+ + T+ +D++G + V+ ++ + RD+ + D +++T+ ++LW + AT+
Sbjct: 91 IQHKTKFLDVLGTITEVTALKTVHIEGQLSPTIIRDVMIEDLSRKTLKITLWAKRATSFT 150
Query: 363 -QELLDNADKSPIVAI 377
Q + D K PI+A+
Sbjct: 151 IQNVYDPVSKKPILAL 166
>gi|326525481|dbj|BAJ88787.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 441 MYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGY 500
M +R +L IT +++ F++ +A I I +Y C+ CNKKV G+ +
Sbjct: 19 MLYNRRTLKEITEITYESEKQEKFYTTEAMIKSIDTSDEWYYIGCRKCNKKVQKQ-GNHF 77
Query: 501 WCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
+C C+K E RY + +CD S ++F EA++
Sbjct: 78 YCPKCEKEPENTCPRYKLKLEICDLSATTTCTMFEAEAKK 117
>gi|297817956|ref|XP_002876861.1| hypothetical protein ARALYDRAFT_904572 [Arabidopsis lyrata subsp.
lyrata]
gi|297322699|gb|EFH53120.1| hypothetical protein ARALYDRAFT_904572 [Arabidopsis lyrata subsp.
lyrata]
Length = 303
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKN-ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYD 238
+NP IKV + +R +K R G + L DE G++I AT+ ++ +KF
Sbjct: 17 INPIHDQNKIKVLI-----LRLWKAYQRDAGNTIEMVLVDEKGSRIHATVEDKNIKKFDS 71
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ G V ++ L + +K+ +++ ++V+ + +P+ F
Sbjct: 72 VLKEGDVVTLNPFKLIKYSGDYKSNSLSFKILFYRTTQVKPCDDFPKEVPEKYFV----- 126
Query: 299 ELGRYVNGTE----LVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E G +NG+ VD+IG + NV P + IR KS PK D+ + D + +
Sbjct: 127 EFGDVLNGSRDTRVFVDVIGQIVNVGPIEDIKIRGKST----PKLDVELRDRGNVRLICT 182
Query: 353 LWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQG---ISLSTLGRSTVLVSPDLPEAK 408
LW + A V ++ A+ + +V I+ +V +++G IS + +G + VL+ P
Sbjct: 183 LWADFAKQV--KVYTEANPAAVVCVIRCAQVKEWKGNWTIS-NAMGATRVLLDPPGVFVD 239
Query: 409 KLKSWYESEG 418
+ +S ++G
Sbjct: 240 EFRSGLPTDG 249
>gi|408381003|ref|ZP_11178553.1| Replication factor-A domain-containing protein [Methanobacterium
formicicum DSM 3637]
gi|407816268|gb|EKF86830.1| Replication factor-A domain-containing protein [Methanobacterium
formicicum DSM 3637]
Length = 791
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 50/307 (16%)
Query: 285 AFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVS-PTMSIRRKSNNEMVPKRDITVAD 343
+ I QTK I EL V G V + G V +V+ PT + + +V R + +AD
Sbjct: 523 SMIYQTK----KIHEL---VEGDRDVSLFGRVLSVAEPTQFTKSDGSTGIV--RSMEIAD 573
Query: 344 ETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPD 403
++ V VSLW++ A +E ++P V +++ I LS +GR+T++ P+
Sbjct: 574 DSG-VVRVSLWDDQANTSFKEGEAVKIENPRVNLRN------NNIELS-VGRTTIITKPE 625
Query: 404 LPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPV 463
EA + S E EGK +IG + G +S+
Sbjct: 626 EDEAS-VPSLDEIEGKLYPSKNIGD-----IEEGDQSI---------------------- 657
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
+ + I+ + + + C CNK+V + + + Y C+ C + ++ ++ I+ +
Sbjct: 658 --KVSGEVVDIRGSKIL-FEMCPNCNKRV-NWVDNAYICDICGEEIKKPNMLMIISLMLE 713
Query: 524 DGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ 583
D +G I+ F + AE ++G + E E+ + GD+ S + K+ ++ + +
Sbjct: 714 DDTGTISITFFRKAAEEVLGMTTAEAEEIIATTGDEGSLEEKVGDLVGRQITVIADASFD 773
Query: 584 EYNNEKR 590
EYN E R
Sbjct: 774 EYNEEVR 780
>gi|413923940|gb|AFW63872.1| hypothetical protein ZEAMMB73_151869 [Zea mays]
Length = 414
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG-QELLDNA 369
D++G++ ++P I NN + RDI + + + ++ ++LW A++ ++ + +
Sbjct: 31 DVLGMLTQINPPHLIGY--NNSTI-IRDIFIKNTSDMSLKITLWGNQASSFSISDVYNQS 87
Query: 370 DKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
+ PIV + F+G LS+ S+ +P +PEA+ ++Y
Sbjct: 88 NNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQ---TYY------------- 131
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPV---------FFSIKAY-----ISL 473
L N + + + S P D+K V F + Y IS
Sbjct: 132 ---NRLQNNDLQQIQPTAAEEEILLSQPPNLDQKTVEELLNIDLDMFPPEGYRCTVTISR 188
Query: 474 IKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISI 533
I + WY +C C+K + +GY C C D + RY + DG+ EA
Sbjct: 189 IVQNSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRYKLNFIATDGTCEAEFFC 245
Query: 534 FNEEAERIIGCSADEL 549
F+ A +I+G D L
Sbjct: 246 FDSIARKIVGKPCDNL 261
>gi|357504883|ref|XP_003622730.1| Replication protein A1-like protein [Medicago truncatula]
gi|355497745|gb|AES78948.1| Replication protein A1-like protein [Medicago truncatula]
Length = 542
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/435 (18%), Positives = 166/435 (38%), Gaps = 37/435 (8%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + P ++ + N ++VRV + + N + + + L D+ G +IQA+
Sbjct: 1 MAPLITPAAAIVAGKINIKLRVRVIHVWTVSEFNNPNEDNSIHMLLLDDKFG-KIQASAK 59
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ + G Y I + + +++ Q+ +++NL + ++ + + IP
Sbjct: 60 KHLVSRIRSNVEEGSTYDIENVLVTKNDPKYQVTQHRFKLNLIDKTKFFKI--DATTIPL 117
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK-RDITVADETKRT 348
F+F+P +E+ L V ++ K N K D+T+ D R
Sbjct: 118 NHFDFMPFNEI--------LEAEREEKVVVVERDELKEKDVNGRRSKIMDLTLQDSESRR 169
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQGISLSTLGRSTVLVSPDLPEA 407
V +LW A + L + SP+V I+ K+ +QGI
Sbjct: 170 VHCTLWANYAERMNSFLAAHDPSSPVVVLIQQCKLKKYQGI------------------- 210
Query: 408 KKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+ + ++S+ G + + + + S+ D + +T + + +
Sbjct: 211 MDVSNEFKSKIDGGDV-QVSQSISHNTTSTVVSLVDDMLQTKRMTIEDLIEATEQCQGIV 269
Query: 468 KAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSG 527
A I I+ + + +Y+AC C +V + S +C C + R+ + +V D +G
Sbjct: 270 LATICGIESEYSWYYQACTKCVGRVR-TVASRLYCGKCNTGRNAVA-RFKLHVQVIDNTG 327
Query: 528 EAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNN 587
+F+ + + + ++ + +Q + + Y L L +V V+ +
Sbjct: 328 STSFILFDRNVSKYVNGTIQDM--IDAQPNNSSDYPSDLDSFVGKQMLFKVEVSDGNLLH 385
Query: 588 EKRQRVTVRAVAPVD 602
R V R A D
Sbjct: 386 NWRNYVVKRTTAEED 400
>gi|402222340|gb|EJU02407.1| nucleic acid-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 363
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 150/363 (41%), Gaps = 50/363 (13%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
DE G +I A +++A +R ++GK+Y I L ++ F + ++ ++ N
Sbjct: 3 FHDETG-EIDAVAWDKAV-DLSERLEIGKLYQIPNAKLVDSSDCFTRTNHWLQVQIHSND 60
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV----QNVSPTMSIRRKSNN 331
++ E + ++ I ++F I+ L + N + VD++ ++ Q + + + N
Sbjct: 61 KIYE-LQDSGRILCIFYDFRRINSL-EWFNDSRHVDLVAIIVRLGQPIKGMKKFKDQEGN 118
Query: 332 E---MVPKRDITVADETKRTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLKVGDF-Q 386
E + D+ + D + V ++ +++ +G+E ++ IK+ + +
Sbjct: 119 ERELITDHVDVYLGDNSGEFVLLAAFDDYGPQFIGRE-------GEVITIKNALIDKYGN 171
Query: 387 GISLSTLGRSTVLVSPDLPEAKK-LKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
+SL T +T L+ A K LK W+ES G + +G S +D
Sbjct: 172 SVSLKTKEFTTELLFESGNHAHKVLKEWFESPGSIADTLCLMTGTYS----------ADS 221
Query: 446 VSLTHITSNPSLGDEKPVF------------FSIKAYISLIKPDQAMWYRACKT--CNKK 491
V + T+N K +F ++ +S D+ Y AC CNKK
Sbjct: 222 VPDSWFTANIPTKTIKEIFTDGIGAHGVRSQVKVRGTVSFYS-DREYTYLACPNPNCNKK 280
Query: 492 VTDALGSG---YWCEGCQKNDEECSLRYIMVARVCDGSG-EAWISIFNEEAERIIGCSAD 547
A +WC C+ S +Y + ++ D G WI+ FN ER+ G A
Sbjct: 281 AQVAESGNSTVWWCTHCKTVYLVPSEKYRLNMQMRDTMGLNNWITAFNGAMERLFGQYAC 340
Query: 548 ELN 550
LN
Sbjct: 341 ILN 343
>gi|348687513|gb|EGZ27327.1| hypothetical protein PHYSODRAFT_376071 [Phytophthora sojae]
Length = 68
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W RV S+ +R Y N RG G + + + D G I+ T+FNEA FYD G
Sbjct: 1 WAFVCRVLSRSPIREYTNLRGGGRLIEIYVGDAAGDTIRITLFNEAVTAFYDVVSPGSTC 60
Query: 247 YISRGTLR 254
Y S G ++
Sbjct: 61 YFSAGRIK 68
>gi|413923939|gb|AFW63871.1| hypothetical protein ZEAMMB73_151869 [Zea mays]
Length = 371
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 14/242 (5%)
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG-QELLDNA 369
D++G++ ++P I NN + RDI + + + ++ ++LW A++ ++ + +
Sbjct: 31 DVLGMLTQINPPHLI--GYNNSTI-IRDIFIKNTSDMSLKITLWGNQASSFSISDVYNQS 87
Query: 370 DKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIG 427
+ PIV + F+G LS+ S+ +P +PEA+ Y + + + I
Sbjct: 88 NNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQT----YYNRLQNNDLQQIQ 143
Query: 428 SGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKT 487
++ D+ ++ + N L P + IS I + WY +C
Sbjct: 144 PTAAEEEILLSQPPNLDQKTVEELL-NIDLDMFPPEGYRCTVTISRIVQNSKWWYPSCSR 202
Query: 488 CNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSAD 547
C+K + +GY C C D + RY + DG+ EA F+ A +I+G D
Sbjct: 203 CHKSSSQT-STGYHCTSCGCTD--INFRYKLNFIATDGTCEAEFFCFDSIARKIVGKPCD 259
Query: 548 EL 549
L
Sbjct: 260 NL 261
>gi|3080360|emb|CAA18617.1| hypothtetical protein [Arabidopsis thaliana]
gi|7268725|emb|CAB78932.1| hypothtetical protein [Arabidopsis thaliana]
Length = 252
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV-FNVELTDEDGTQIQATMFNEAA 233
H L L+P WTI V V +R YK + L DE GTQI+AT+ +
Sbjct: 5 HHLYELSPMVTGWTICVMV-----LRIYKKFLNPNAFELRLVLADEWGTQIEATIGPRFS 59
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAV-NETAFIPQ-TK 291
++DR + + I+ +R + KT + + + +++ V + ET + + T
Sbjct: 60 AFYFDRIKENQWKTITTFLVRPNCEAIKTTPHQFRILFMDHTIVTSSTPRETGLLNKFTP 119
Query: 292 FNFVPIDELGR----YVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKR 347
F+++ D +G ++ L D+IG + NV + N+ K T+ D+ K
Sbjct: 120 FDYIVDDVVGNDTLVDISNISLKDVIGALVNVGILTNTASNENDMAGFKLPFTIMDKNKD 179
Query: 348 TVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
T+ + E+A ++ + + ++A+ K+ F
Sbjct: 180 TLVCEAYGEIAVDLEKRFRAFRKNNVVIALAWWKIIRF 217
>gi|391333915|ref|XP_003741355.1| PREDICTED: uncharacterized protein LOC100901486 [Metaseiulus
occidentalis]
Length = 1310
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 239 RFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID 298
+ ++GK Y I+ ++ N +F+ +D+E+ L + S++ E N A IP+ K + PI
Sbjct: 1109 QIEIGKCYQITIFRVKPVNVKFENANHDFEVQLTKLSKIREIDN--AIIPELKTDLTPIV 1166
Query: 299 E-LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
E LGR NG + V+++ +V +V P ++ + ++++T+ D + R V+
Sbjct: 1167 EILGR--NGNDFVNVMAIVYDVEPAQTVDCRDAKPRT-RQNVTLVDNSLRMFFVT 1218
>gi|18542918|gb|AAL75753.1| Putative helicase [Oryza sativa Japonica Group]
gi|31429797|gb|AAP51799.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1084
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 142 PKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRT 201
P ++ K AA ++ +N N + + + LV+ N I RV+ N
Sbjct: 747 PTYRLILKEAAVVMLLRNLNQS----IGLCNGTRLLVT----DSNKRILARVSRLWN--- 795
Query: 202 YKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQ 259
+ + + +F+ +L DE GT I A ++ K + KVYYI T+R AN+
Sbjct: 796 FTDLNDDTKIFHTDLVLLDEMGTSIHAQIYPPITEKMKPLLKEEKVYYIDSFTVRAANRT 855
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
++ V N+ + ++ + +EE +N P F+ P +++ V
Sbjct: 856 YRLVANNLMILFSKWTTLEEHINVPPHFPGITFSLTPFEDVPSLV 900
>gi|357488491|ref|XP_003614533.1| hypothetical protein MTR_5g055160 [Medicago truncatula]
gi|355515868|gb|AES97491.1| hypothetical protein MTR_5g055160 [Medicago truncatula]
Length = 270
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F +EL + G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQDYKNKK---LPFFMELVLMNRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + N ++ N+Y+++ N++V+ +++T +P
Sbjct: 62 LIYKFKEQLQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPIDE-LGRYVNGTELVDIIGVVQNV 319
++F P + LVD+IGV+ V
Sbjct: 120 YSFTPAPHVFNESYDNNYLVDVIGVMIGV 148
>gi|335440024|ref|ZP_08561748.1| replication factor A [Halorhabdus tiamatea SARL4B]
gi|334889192|gb|EGM27482.1| replication factor A [Halorhabdus tiamatea SARL4B]
Length = 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L Q N ++ V +RT+ G EG V N+ + DE G +++ T+++E A +
Sbjct: 167 ALTMGQSNVNVEGVVLDTEPVRTFDRDDGSEGRVANLSIGDETG-RVRVTLWDERADR-- 223
Query: 238 DRFQLGKVYYISRG-TLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNFV 295
V I G T+ V + + + D E+++ E ++E + + A+ P+T
Sbjct: 224 -------VEEIDAGATVEVVDGYVREREGDLEVHVGEEGAIDELEDGDVAYAPET----T 272
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PID+ V E VDI GVV++ PT + R +E K I + D+T + V+LW
Sbjct: 273 PIDD----VELDETVDIGGVVRSTDPTRTFDRDDGSEGQVKN-IRIQDDTG-DIRVALWG 326
Query: 356 ELA 358
E A
Sbjct: 327 EKA 329
>gi|357515665|ref|XP_003628121.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355522143|gb|AET02597.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 637
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M + P+ ++ + N ++VRV + + N + + + L D G +IQA+
Sbjct: 1 MAPLITPVAAIVAGKINIKLRVRVVHVWTVFEFNNPNEDNSIHMLLLDDNLG-KIQASTK 59
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
+ + G Y + + +++ Q+ +++NL + ++ + + IP
Sbjct: 60 KHWVPRIRSNVEEGSTYDNENVLVTKNDPKYQVTQHSFKLNLIDKTKFFKF--DATTIPL 117
Query: 290 TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTV 349
F+F+P +E+ ++VD+IG Q V + N D+T+ D R V
Sbjct: 118 NHFDFMPFNEILEAKREEKVVDVIG--QAVERDELKEKDVNGRRSKIMDLTLQDFESRRV 175
Query: 350 TVSLWNELATNVGQELLDNADKSPIVA-IKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEA 407
+LW A + L+ + SP+V I+ K+ +QGI +S R T+ DL EA
Sbjct: 176 RCTLWANYAERMNSFLVAHDPSSPVVVLIQHCKLKKYQGIMGISNTKRMTI---EDLIEA 232
>gi|357146217|ref|XP_003573915.1| PREDICTED: uncharacterized protein LOC100821223 [Brachypodium
distachyon]
Length = 234
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 246
W++ +RV K ++ + R N L D +GT++ AT++++ + + G Y
Sbjct: 23 WSLCLRVYHKFHVERIGHGRKR---VNFVLLDAEGTKMAATIYDDQVDRLDPLLKEGIAY 79
Query: 247 YISRGTLR-VANKQFKTV-QNDYEMNLNENSEVEEAVN----ETAFIPQTKFNFVPIDEL 300
Y+S ++ +++ Q + N YE + ++V E N F P F+P D +
Sbjct: 80 YVSMMSVEPISSTQRRMFADNPYECHFTSVTQVFEMRNMGEGTIPFFPP----FLPCDRI 135
Query: 301 GRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
++ VD+IG+V VS +++ N +P R++ + D+ V V + +++ +
Sbjct: 136 FPSTLYNDIYVDVIGMVLYVS-SVAFADGIYNRRIPFRNLLLMDDKFNFVNVCVKDKMES 194
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGISL 390
+ +A++ IV + L+V G +L
Sbjct: 195 GHTRAWARSAEECTIVIVTMLRVKHAVGCTL 225
>gi|66771039|gb|AAY54831.1| IP08052p [Drosophila melanogaster]
Length = 189
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 214 VELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNE 273
+ L DE G +I +F + Y + Q G VY IS + A +K N ++
Sbjct: 1 MHLLDESG-EITGLVFADYDNGLYGQIQTGLVYLISGFEVEKAISSYKVSDNPNQLFFCA 59
Query: 274 NSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEM 333
N+ +E + + IP+ K++F+P+ ++ + E VD IG+ V N
Sbjct: 60 NTVLELSACDR--IPREKYSFLPLLKVSSKRD-QEPVDAIGICAEVG------MLENRGG 110
Query: 334 VPKRDITVADETKRTVTVSLWNELATN-VGQELLDNADKSPIVAIKSLKVGDFQG-ISLS 391
R++ + D V ++LW + A N VGQ + ++ +K + + L+
Sbjct: 111 CFIRELLLVDPDFHPVILNLWQKEAVNFVGQ-------RDDVIVVKGARAQLHNNEMKLN 163
Query: 392 TLGRSTVLVSPDLPEAKKLKSWYESE 417
+ + ++PD+P+A + WY ++
Sbjct: 164 ASWYTNMQINPDIPDATGMLEWYNNQ 189
>gi|410721996|ref|ZP_11361314.1| single-stranded DNA-binding protein [Methanobacterium sp.
Maddingley MBC34]
gi|410597945|gb|EKQ52546.1| single-stranded DNA-binding protein [Methanobacterium sp.
Maddingley MBC34]
Length = 791
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRS 396
R + +AD+T V SLW++ A +E ++P V +++ +V LS +GR+
Sbjct: 567 RSMDIADDTG-VVRASLWDDKANTSFKEGEAVKIENPRVNLRNDRV------ELS-VGRT 618
Query: 397 TVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPS 456
T++ PD E + S E EGK +IG + G +S+
Sbjct: 619 TIITKPD-EEETSVPSLDEIEGKLYPSKNIGD-----IEEGDQSI--------------- 657
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
+ + I+ ++ + + C CNK+V A GY C+ C + E+ ++
Sbjct: 658 ---------KVTGEVVDIRGNKIL-FEMCPNCNKRVNWA-EDGYICDICGEKIEKPNMLM 706
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
I+ + D +G I+ F + AE ++ + E E+ + GD+ S + K+ ++ +
Sbjct: 707 IISLMLEDDTGTISITFFRKAAEEVLDMTTAEAEEIIATTGDEGSLEEKVGDLVGRHITV 766
Query: 577 RVSVAQQEYNNEKR 590
+ EYN E R
Sbjct: 767 IADASFDEYNEEVR 780
>gi|242042956|ref|XP_002459349.1| hypothetical protein SORBIDRAFT_02g003016 [Sorghum bicolor]
gi|241922726|gb|EER95870.1| hypothetical protein SORBIDRAFT_02g003016 [Sorghum bicolor]
Length = 109
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 204 NARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTV 263
N E ++ L D G I A + +A + GK+ Y+S+ T++ A +++ V
Sbjct: 8 NEENEIIHLDLVLIDSMGVSIYAEIPRDAVPYLKPYLEEGKIVYMSKITVQTAKPEYRAV 67
Query: 264 QNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY 303
+N + LN+ +++ +A N+ P+ F+ +PI++L Y
Sbjct: 68 ENPCMIKLNKRTQIRDAHNQPPDFPKYTFSLIPIEKLLDY 107
>gi|413935987|gb|AFW70538.1| hypothetical protein ZEAMMB73_690566 [Zea mays]
Length = 428
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 30/255 (11%)
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG-Q 363
N T L+ ++G++ ++P I NN + RDI + + + ++ ++LW A++
Sbjct: 39 NRTYLIVVLGMLTQINPPHLIGY--NNSTI-IRDIFIKNTSDMSLKITLWGNQASSFSIS 95
Query: 364 ELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
++ + ++ PIV + F+G LS+ S+ +P +PEA+ + ++
Sbjct: 96 DVYNQSNNQPIVILLVGFLAKRFKGQPYLSSTTASSWYFNPGIPEAQTYYNRLQN----- 150
Query: 422 SMASIGSGLGSLAKNGARS--MYSDRVSLTHITSNPSLGDEKPVFFSIKAY-----ISLI 474
+ L + A+ + S +L H T L + P F + Y IS I
Sbjct: 151 ------NDLQLIQPKAAKEEILLSQPPNLEHKTVE-VLLNIDPDMFPPEGYRCTITISRI 203
Query: 475 KPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIF 534
+ WY +C +K + +GY C C D + RY + DG+ EA F
Sbjct: 204 VQNSKWWYPSCFRSHKSSSQ---TGYHCTSCGCTD--INFRYKLSFIATDGTCEAEFFCF 258
Query: 535 NEEAERIIGCSADEL 549
+ A +I+G D L
Sbjct: 259 DSIARKIVGKPCDNL 273
>gi|297791919|ref|XP_002863844.1| hypothetical protein ARALYDRAFT_917641 [Arabidopsis lyrata subsp.
lyrata]
gi|297309679|gb|EFH40103.1| hypothetical protein ARALYDRAFT_917641 [Arabidopsis lyrata subsp.
lyrata]
Length = 393
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 110/277 (39%), Gaps = 32/277 (11%)
Query: 155 LRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNV 214
+ DQ G+ P + R + + SLNP W+I V++ + + + N+
Sbjct: 121 IEDQEGDGWPFDVITYNRNMFTISSLNPLIHEWSICVKI-----LHVWHDLDDVSNSLNL 175
Query: 215 ELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQF-KTVQNDYEMNLNE 273
L D GT+I+A + KF + ++ I R L + +T + +++ +
Sbjct: 176 ILVDNQGTKIRAAIRESLVTKF-SPLLIEDLWVILRKFLLTPDVDLVRTTPHRFKIQFSP 234
Query: 274 NSEVEEAVNETAFIPQTKFNFVPID----ELGRY-------VNGTELVDIIGVVQNVSPT 322
++ VE NF+ D GR+ N VD++G V NV+
Sbjct: 235 DTCVE------------YLNFLTCDYDYFSFGRFRDIRTGISNPYIYVDLVGRVDNVNDI 282
Query: 323 MSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKV 382
++ +++ + + D + L E A ++ DN D + I+ K+
Sbjct: 283 QLVQTVGSSKDISVVYFDLIDTELTHLNFRLTGESAFKFHKQWKDNIDDVVVCIIRFAKI 342
Query: 383 --GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
+ + +G S ++V P LP +LK W+ +
Sbjct: 343 VATSNRMWHCTNIGCSKIMVDPPLPGVVELKEWFADD 379
>gi|321457156|gb|EFX68248.1| hypothetical protein DAPPUDRAFT_330274 [Daphnia pulex]
Length = 227
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
V E E A P FNFVP D+L N +VD+IG+V ++ + + K+
Sbjct: 50 VGEVTEEAAEKPTITFNFVPFDQLTNLEN-ISIVDVIGLVLHLQEKVLVETKTTK---IS 105
Query: 337 RDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD-FQGISLSTLGR 395
R +T A+ T T + L G L ADK IVA+ +K+ + F L TL
Sbjct: 106 RSLT-AEFVDSTNTEVRLHSLFNYRGSLLEKVADKC-IVALSGVKISNKFGRRYLETLSS 163
Query: 396 STVLVSPDLPEAKKLKSW 413
+ V ++PD+ E ++L+ W
Sbjct: 164 TVVQINPDMTEVRELREW 181
>gi|357511465|ref|XP_003626021.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355501036|gb|AES82239.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 887
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 31/309 (10%)
Query: 248 ISRGTLRVANK--QFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
S G VA+ ++T ++ Y++N +++++ + F+ + E+ +
Sbjct: 157 FSIGNFSVASNVGSYRTARHPYKINFRYGTKIKQC--DDKFVSADIYVIGDPREIFQSEY 214
Query: 306 GTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
T+ L+D++G+++ V S R + + ++ T V +EL +
Sbjct: 215 DTDYLIDVMGMLKVVGVEKSYTRNGSQSKMISIELYYDGYTLFGPYV---DELNAFLASG 271
Query: 365 LLDNADKSPIVAIKSLKVGDFQGISL--STLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
DN +VA++ K+ FQG ++ +T+ + VL +P A LK E +
Sbjct: 272 ETDNV----VVAVQLTKIKIFQGQAMIQNTINATKVLFNPTFTAALLLKK-RMVENDDSP 326
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWY 482
I S ++ D ++L+ +T+ L +EK FF++ +++I D WY
Sbjct: 327 SPDI-----SKITEASKVSVEDFLNLSPMTTVEGLKEEK--FFAVFGTVNVIVDDSDWWY 379
Query: 483 RACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII 542
+C CNKKV Y+C C K Y++ +V D + A +F+ +A +
Sbjct: 380 TSCVVCNKKVYPD-EKMYFCSKCNK--------YMIKMKVVDHTDFATFVLFDRDAAELF 430
Query: 543 GCSADELNE 551
+ ++ E
Sbjct: 431 KKTCADMIE 439
>gi|297841095|ref|XP_002888429.1| hypothetical protein ARALYDRAFT_338749 [Arabidopsis lyrata subsp.
lyrata]
gi|297334270|gb|EFH64688.1| hypothetical protein ARALYDRAFT_338749 [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD++G + NV + + +++ + + + T + L
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNVRELVFVPSVEHSQ---GGYFELYFDLRDTECIHL 182
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + K+ I IK +K+ + + + G + ++++PDL
Sbjct: 183 ECRLTGDLAVEFYDLWKHRSRKTVICIIKFVKLELSQEHRWRCTNVTGSTRIMLNPDLSI 242
Query: 407 AKKLKSW 413
++ W
Sbjct: 243 TDEMLCW 249
>gi|242089441|ref|XP_002440553.1| hypothetical protein SORBIDRAFT_09g003015 [Sorghum bicolor]
gi|241945838|gb|EES18983.1| hypothetical protein SORBIDRAFT_09g003015 [Sorghum bicolor]
Length = 156
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAAR 234
L +L P Q TI VRV K Y +G + +V+L DE G + + +
Sbjct: 9 LPALRPRQWRSTICVRVCRKWE---YHGGTDDGPIQHVDLVLLDEQGNSMYGEIPQQEVE 65
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ G +Y ISR + A ++ V + Y + ++ + A + PQ +
Sbjct: 66 TKSPLLEEGGIYIISRFRVSNAKSGYRPVDSPYMVEFTLHTTISAAKTDLLAFPQYAYKI 125
Query: 295 VPIDELGRYVNGTE-LVDIIGVVQNVS 320
PID L + T+ +D IGV+ VS
Sbjct: 126 TPIDALATHAGDTKNFLDTIGVLVEVS 152
>gi|8655996|gb|AAF78269.1|AC020576_13 Contains similarity to a hypothetical replication protein F12P23.12
gi|4733976 from Arabidopsis thaliana BAC F12P23
gb|AC007264 and contains a DNA polymerase C-terminal
PF|00336 domain [Arabidopsis thaliana]
Length = 244
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 21/247 (8%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCV-FNVELTDEDGTQIQATMFNEAA 233
H L L+P WTI V V +R YK + L DE GTQI+AT+ +
Sbjct: 5 HNLYELSPMVTGWTICVIV-----LRIYKKFLNTNAFELRLVLADEWGTQIEATIGPHFS 59
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQ-TK 291
++DR Q + IS +R + +T +++ + +++ + + T + + T
Sbjct: 60 AFYFDRIQENQWKKISTFLVRPNCEPIRTTPHEFRILFMDHTIITSSTPLATGLLNKFTP 119
Query: 292 FNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
F+++ D +G++ LVD+IG + NV + + K + D+ K T+
Sbjct: 120 FDYIVDDVVGKHT----LVDVIGALVNVGILTNTASNGKDTAGFKLPFMIMDKNKDTLEC 175
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKV-------GDFQGISLSTLGRSTVLVSPDL 404
++A ++ + + ++A+ KV F+ +S + + ST+ PD+
Sbjct: 176 EANGQIAVDLEKRFRAFCKNNVVIALAWWKVVRYYPGCNWFKIVSHAPI--STMYPEPDV 233
Query: 405 PEAKKLK 411
E +++K
Sbjct: 234 EEIEEIK 240
>gi|321455751|gb|EFX66876.1| hypothetical protein DAPPUDRAFT_331651 [Daphnia pulex]
Length = 245
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 39/168 (23%)
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
T++ AN ++ +++N YE+ N+N+ + N++ +V
Sbjct: 106 ATVKPANNKYSSMRNGYEITFNQNTALPNLENDS------------------------IV 141
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IG+V S + I +K N++ + + T VT+SL +L
Sbjct: 142 DVIGLVLYSSEFVFIDKK--NKVSRFLEAKLVGSTNTEVTLSLLGKLV------------ 187
Query: 371 KSPIVAIKSLKV-GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
IVA K +K+ +F G L TL + V V+P + EA +L+ WY +E
Sbjct: 188 DQRIVAYKGVKISNNFGGCYLETLSSTVVQVNPAMNEAHQLREWYNNE 235
>gi|442748039|gb|JAA66179.1| Hypothetical protein [Ixodes ricinus]
Length = 103
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLL 576
I+ + D W++ F E AE I+G S L ELK + ++ +++ + + +
Sbjct: 2 ILSVNIADYQDNQWVTCFQESAEAILGQSTAYLGELKDK--NEQAFEEIFQNANFRSFVF 59
Query: 577 RVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
++ V + YN+E R + TV V PVD+ S+ ++ I +
Sbjct: 60 KIRVKLETYNDESRIKATVMDVKPVDYREYSRRMIMNIRR 99
>gi|297797954|ref|XP_002866861.1| hypothetical protein ARALYDRAFT_352954 [Arabidopsis lyrata subsp.
lyrata]
gi|297817960|ref|XP_002876863.1| hypothetical protein ARALYDRAFT_346804 [Arabidopsis lyrata subsp.
lyrata]
gi|297312697|gb|EFH43120.1| hypothetical protein ARALYDRAFT_352954 [Arabidopsis lyrata subsp.
lyrata]
gi|297322701|gb|EFH53122.1| hypothetical protein ARALYDRAFT_346804 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 28/243 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+PL LNP W I+ +V + ++ +V L D+ G +I + E
Sbjct: 4 YPLSKLNPDTSEWRIRAKV-----LAIWQEYYDHYSTVDVVLVDDKGGKIHGIIPMELMP 58
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+F R + I+ LR K V + +E+ + + ++F
Sbjct: 59 QFSSRIVENRWIVITDFILRPVVDALKPVAHRFELERSGDG---------------FYDF 103
Query: 295 VPIDELGRYVNGTE----LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
V + GR +NG VDIIG NVS S + V + D ++R +
Sbjct: 104 V---DFGRILNGAHDTSICVDIIGKAINVSKITSFGCHVYEDQVEHIVFDLQDTSERVLR 160
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKK 409
L A + + + + I ++ ++V +G+ + + R S +L++P +P+ KK
Sbjct: 161 CVLSITDALPLYRLWMTDPSDVIICVLRFVRVEFREGMWICSGVRCSKLLLNPSIPDVKK 220
Query: 410 LKS 412
+KS
Sbjct: 221 MKS 223
>gi|357439657|ref|XP_003590106.1| hypothetical protein MTR_1g044430 [Medicago truncatula]
gi|355479154|gb|AES60357.1| hypothetical protein MTR_1g044430 [Medicago truncatula]
Length = 552
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 138/320 (43%), Gaps = 33/320 (10%)
Query: 248 ISRGTLRVANK--QFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
S G VA+ ++T ++ Y++N +++++ + F+P + E+ +
Sbjct: 7 FSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQC--DDKFVPADIYVIGDPREIFQSEY 64
Query: 306 GTE-LVDIIGVVQNVSPTMSIR-RKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQ 363
T+ L+D++G+++ V S S ++M+P D V+L+ +
Sbjct: 65 DTDYLIDVMGMLKVVGVEKSYTCNGSQSKMIPIE----LDYNGFHFKVTLFGPYVDELNA 120
Query: 364 ELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKL-KSWYESEGKGTS 422
L ++ +VA +T+ + VL +P A L K E++
Sbjct: 121 FLASGETENVVVATIQ-----------NTINATKVLFNPTFTAALLLRKRMVENDD---- 165
Query: 423 MASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPVFFSIKAYISLIKPDQAMW 481
S G+ + + S+ D +L+ +T+ L D + FF++ +++I D W
Sbjct: 166 --SPSPGISKITEASKVSVEEDFFNLSPMTTVEGLKDCAEEKFFAVFGTVNVIVDDSDWW 223
Query: 482 YRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERI 541
Y +C CNKKV Y+C C K+ + RY++ +V D + A +F+ +A +
Sbjct: 224 YTSCVVCNKKVYPD-EKMYFCSKCNKHVLNVTPRYMI--KVVDHTDSATFVLFDRDAAEL 280
Query: 542 IGCSADELNELKSQLGDDNS 561
+ ++ E + +G D S
Sbjct: 281 FKKTCADMIESRG-MGTDAS 299
>gi|321466697|gb|EFX77691.1| hypothetical protein DAPPUDRAFT_105965 [Daphnia pulex]
Length = 231
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 206 RGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLR-VANKQFKTVQ 264
R G N + DE G +I+ + F++ A+ + +GK Y IS+ ++ + + K
Sbjct: 9 RSSGTRINCDFQDESGLKIKGSAFDDHAKSLDKQISVGKNYAISKAKVQDLFGNKVKGFH 68
Query: 265 NDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR-YVNGTELVDIIGVVQNVSPTM 323
N YE+ L ++S+ E ++ ++ +F P+ +L V+ ++++ VV+++
Sbjct: 69 N-YELVLYKHSQFELLKDDNDYVAPVD-HFRPLSDLDSGNVDVEASINVLAVVKSIGAMQ 126
Query: 324 SIRRKSNNEMVPKRD-----ITVADET--KRTVTVSLWNELATNVGQELLDNADKSPIVA 376
++ K+ + + RD + + D + + ++ W A +V + +A +
Sbjct: 127 NMEIKNKDGTI--RDAAYLEVQLVDRSLQHSQIPITFWGPAAADVRRHPAGSA-----IK 179
Query: 377 IKSLKVGDFQG-ISLSTLGRSTVLVSPDLPEAKKLKSWY 414
+K + V +G +SL G + V P +A++L SW+
Sbjct: 180 LKGVVVISREGRLSLKATGVTDVEFDPKTDDAQELLSWF 218
>gi|84490268|ref|YP_448500.1| replication factor A [Methanosphaera stadtmanae DSM 3091]
gi|84373587|gb|ABC57857.1| predicted ssDNA-binding protein [Methanosphaera stadtmanae DSM
3091]
Length = 793
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 191/447 (42%), Gaps = 83/447 (18%)
Query: 173 RVHPLVSLNPYQGNWTIKV-RVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFN 230
++ ++ LN +G V R+ + + R ++ G +G + ++EL DE G ++ ++++
Sbjct: 411 KIENVLDLNEDEGREVDVVGRIITTNDTREFERGDGSKGQIKSIELADETGI-VRTSLWD 469
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEV-----EEAVNETA 285
E K +LG I R+ Q E+++ ++S + EE VN +
Sbjct: 470 E---KVDITEKLGDAIKIENARTRIGQGQM-------ELSVGKSSRITTPTDEEIVNLPS 519
Query: 286 F--IPQTKFNFVPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
+ I Q ++N I +L T+L V I+ + + + T + R R I VA
Sbjct: 520 YENIEQDRYNDRTISQLEENETNTKLRVRILNINEINTFTRTDGRDGR-----VRSIYVA 574
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSP 402
DET + VSLW+ D + I K G + ++ +P
Sbjct: 575 DETGE-IQVSLWD--------------DDTEIKFTK---------------GSAIIIENP 604
Query: 403 DLP-EAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG--- 458
++ + KL+ SIG+G S + + +SLT I + +
Sbjct: 605 NITRQNTKLR------------LSIGNG--STIRAARQEEAEKMLSLTEIENKLYVEKYI 650
Query: 459 ---DEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
+E IK IS I ++ + Y C CN +T +GY C C + E+ +
Sbjct: 651 EDIEEDDQHIKIKGTISEINSEKII-YTMCPNCNIGITQD-ENGYICNECGEKIEKPNYL 708
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
I+ + D +G + F ++AE +I + +++ + Q GD+++ KL+++ + H
Sbjct: 709 MIISTTLQDETGTVQATFFRKDAEELISTTTEKVVAIYEQTGDESAMSSKLEDM--IGHE 766
Query: 576 LRVSVAQQEYNN-EKRQRVTVRAVAPV 601
+ + +A +N ++ R+ VR + V
Sbjct: 767 VTI-IANANFNEYDEDIRLNVRQLVIV 792
>gi|297808989|ref|XP_002872378.1| hypothetical protein ARALYDRAFT_351933 [Arabidopsis lyrata subsp.
lyrata]
gi|297318215|gb|EFH48637.1| hypothetical protein ARALYDRAFT_351933 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 28/243 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+PL LNP W I+ +V + ++ +V L D+ G +I + E
Sbjct: 4 YPLSKLNPDTSEWRIRAKV-----LAIWQEYYDHYSTVDVVLVDDKGGKIHGIIPMELMP 58
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+F R + I+ LR K V + +E+ + + ++F
Sbjct: 59 QFSSRIVENRWIVITDFILRPVVDALKPVAHRFELERSGDG---------------FYDF 103
Query: 295 VPIDELGRYVNGTE----LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
V + GR +NG VDIIG NVS S + V + D ++R +
Sbjct: 104 V---DFGRILNGAHDTSICVDIIGKAINVSKITSFGCHVYEDQVEHIVFDLQDTSERVLR 160
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKK 409
L A + + + + I ++ ++V +G+ + + R S +L++P +P+ KK
Sbjct: 161 CVLSITDALPLYRLWMTDPSDVIICVLRFVRVEFREGMWICSGVRCSKLLLNPSIPDVKK 220
Query: 410 LKS 412
+KS
Sbjct: 221 MKS 223
>gi|357459409|ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355489033|gb|AES70236.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 537
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQAT 227
M P+ ++ + W IK RV + + F++E L D +G++I A+
Sbjct: 1 MALTFEPISQISSSKPAWNIKARVVRLWKVSDFNR---NTLPFSIEMVLMDSEGSRIHAS 57
Query: 228 MFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFI 287
+ KF + GKVY + +KT + Y++N ++ A +
Sbjct: 58 IKKTLLYKFQSEIREGKVYSFENMGIAANGGSYKTTHHPYKLNFQFGTKCLSLCG--ALV 115
Query: 288 PQTKFNFVPI-DELGRYVNGTELVDIIGVVQNV 319
+ F FVPI D +G + LVD+IG++ V
Sbjct: 116 SGSDFKFVPISDIVGGSYDCDYLVDVIGMLTGV 148
>gi|297838409|ref|XP_002887086.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332927|gb|EFH63345.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD++G + NV + + +++ + + + T + L
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNVRELVFVPSVEHSQ---GGYFELYFDLRDTECIHL 182
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + + I IK +K+ + + ++ G + ++++PDL
Sbjct: 183 ECRLTGDLAVEFYDLWKHRSRNTVICIIKFVKLELSQEHRWRCINVTGSTRIMLNPDLSI 242
Query: 407 AKKLKSW 413
++ W
Sbjct: 243 TDEMLCW 249
>gi|391329299|ref|XP_003739112.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Metaseiulus occidentalis]
Length = 214
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 158 QNGNMAPAARLAMTRRVHPL--VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE 215
++ +P ++M ++ L V L Y G ++ RVTSK ++ + EG +F+
Sbjct: 22 KSNTTSPDCDVSMVKKTRFLKDVVLTRYGG--VLEGRVTSKTPIKEWSKNGKEGKLFSFL 79
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
+ DE +I + + + + Q+ Y I+ + N F + ++ E+ L++ S
Sbjct: 80 MADETA-RISVIVSGDKTDEVFSTIQVNHCYRITGFKPKPVNPHFSSTDHECEVTLSKIS 138
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP 335
+++E E IPQT+ I + + L+D+ ++ ++ P +I + + +
Sbjct: 139 KIKEI--ERDDIPQTQSLCSSIASI-LNIEKNCLIDLTAILFDLLPVQNITCR-DGSIQK 194
Query: 336 KRDITVADETKRTVTVSLWN 355
K+ + D++K+ V++ LWN
Sbjct: 195 KQTALLVDDSKKIVSLDLWN 214
>gi|297790965|ref|XP_002863367.1| hypothetical protein ARALYDRAFT_356287 [Arabidopsis lyrata subsp.
lyrata]
gi|297309202|gb|EFH39626.1| hypothetical protein ARALYDRAFT_356287 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 165/402 (41%), Gaps = 38/402 (9%)
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
IQ ++ + KF + G + I ++ NK +K + ++M L E + +
Sbjct: 32 IQGSVHHFLIEKFGAQLCEGSLIEICNFNVQDCNKNYKVSDHKFQMILTERTTITSVDQN 91
Query: 284 TAFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
I F F ++L + + T+ L D+IG ++ + S R + + + + +
Sbjct: 92 FCKISLENFRFRNHEDLAKLKDMTQHLYDVIGYIKKIKK--SDVRTHDTPTLRRVTLPLL 149
Query: 343 DETKRTVTVSLWNELATNVGQELLDNA--DKSPIVA-------IKSLKVGDFQG-ISLST 392
E +T ++W E A Q DK +V + S+ + +QG I LS
Sbjct: 150 LEGGMEITATIWAEQAEQAEQAEQVEQLEDKYRVVGSDNIVLIMTSVLIKTYQGAICLSA 209
Query: 393 LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGL--GSLAKNGARSMYSDRVSLTH 450
+ +S + + + +G + ++GS + + + ++S
Sbjct: 210 SSGTKFYLSREFDPVTTFRKSFSYDGG--CLVNLGSMIEQAPMIIRCSEPLHSINDIWEF 267
Query: 451 ITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDE 510
I+S+ +K +F KA I+ I + Y +C TC+ K+ + GS C+ C K +
Sbjct: 268 ISSDVP---QKKIFVC-KATITDIVLRKGWNYISCSTCSTKLEKS-GSSLNCQKCGKTSQ 322
Query: 511 ECS-LRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNE-------------LKSQL 556
L + + V DG A + IF+++ +I G +A+++ L++ +
Sbjct: 323 SVGVLSFKIEVIVDDGDDSATLVIFDQDGSQITGTTAEDIKRNSGEEELKGIPKSLRTII 382
Query: 557 GDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAV 598
G+ +Y L VT L + V + Y++ Q + + V
Sbjct: 383 GE--TYLFALSRVTTTAGLQILKVGTKHYDSSVLQNIVYQEV 422
>gi|302783422|ref|XP_002973484.1| hypothetical protein SELMODRAFT_413871 [Selaginella moellendorffii]
gi|300159237|gb|EFJ25858.1| hypothetical protein SELMODRAFT_413871 [Selaginella moellendorffii]
Length = 259
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 314 GVVQNVSPTMSIRRKSNNEMVP-KRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
G V + S + IRR SN P + + +V + LW+ A G + D+ +
Sbjct: 45 GTVYSFSGSGGIRR-SNQAYTPFEATWEIQANKGHSVDLCLWDLKAEEEGSYIQDSGVQ- 102
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSW 413
PI+ +K KV D+ G SLS +G ST+L+ P++ L+ W
Sbjct: 103 PIICVKGGKVLDYNGKSLSAIGVSTILIEPEMEAMADLREW 143
>gi|357490349|ref|XP_003615462.1| hypothetical protein MTR_5g068430 [Medicago truncatula]
gi|355516797|gb|AES98420.1| hypothetical protein MTR_5g068430 [Medicago truncatula]
Length = 195
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M+ + + + +++P + +WT+ V+V + YKN + F++E+ + G I+ T+
Sbjct: 1 MSTKHNFISNVSPRKQSWTLVVKVVRAWFGQDYKNKK---LPFSMEVI-KFGASIRRTLI 56
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ 289
KF ++ Q G ++ IS + + ++ +Y++N N++V+ ++ T +P
Sbjct: 57 ----YKFKNQLQEGMMFTISSFNVASNSDLYRPSHKEYKLNFTINTKVKLSI--TVLVPT 110
Query: 290 TKFNFVPI-DELGRYVNGTELVDIIGVVQNV 319
++F P D + + LVD+IGV+ V
Sbjct: 111 NVYSFTPAPDVFNEFYDNNYLVDVIGVMIGV 141
>gi|357458969|ref|XP_003599765.1| Fgenesh protein, partial [Medicago truncatula]
gi|355488813|gb|AES70016.1| Fgenesh protein, partial [Medicago truncatula]
Length = 239
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
L+++ P + W I+VRV + + RG + L D+DG +IQAT+ + +F
Sbjct: 8 LLNVRPPRMAWNIRVRVVRLWRIMS-SLVRGRVIFMEMVLLDQDGNRIQATIPPDCVDRF 66
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ-TKFNFV 295
+ F +VY S + ++ + +++ + L E + V VN +I Q F+F
Sbjct: 67 QNTFHENRVYMFSNFKVLPNDRSTRVTSHNHRLKLWEETVV---VNHDGYIIQRFGFSFF 123
Query: 296 PIDELGRYVNGT-ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE------TKRT 348
++ + +G L+D+ G++ ++ + + N + + +T DE + T
Sbjct: 124 SSAQILEHQHGCGHLIDVFGLLTSLHYDFVVDARQNLATIARFGLT--DERFDFYQCRGT 181
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKV 382
+ L+ L P+V I+ K+
Sbjct: 182 IECVLYGRFIGFFKGLLSRFGSALPVVVIQFAKI 215
>gi|304315505|ref|YP_003850652.1| replication factor A [Methanothermobacter marburgensis str.
Marburg]
gi|302588964|gb|ADL59339.1| predicted replication factor A [Methanothermobacter marburgensis
str. Marburg]
Length = 792
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 167/409 (40%), Gaps = 64/409 (15%)
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
R+ S + R ++ G G V ++EL DE G +I+ ++++E A K +G
Sbjct: 427 RIFSLSDPREFERQDGTGIVRSMELADETG-RIRVSLWDEKAEK---PLNVGD------- 475
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
+R+ N + + E+N + + E +P+ N +EL + T+ +D
Sbjct: 476 AVRIENARIRLGLYSVELNTGRTTRIVEP------LPEDIENLPSFEELEEMLYTTKKID 529
Query: 312 I-------IGVVQNVSPTMSIRRKSNNEMVPK--RDITVADETKRTVTVSLWNELATNVG 362
I ++ V R + P R + AD+T ++ SLW++ A
Sbjct: 530 ELEEDDRNIRIIARVVDLFDPREFQRGDGTPGLVRTVEFADDTG-SIRASLWDDAA---- 584
Query: 363 QELLDNADKSPIVAIKSLKVGDFQGISLS-TLGRSTVLVSPDLPEAKKLKSWYESEGKGT 421
+ L D I + + D G L ++GR++ + + L S+ E +
Sbjct: 585 ERPLSIGDAVRIENPRVIYRDDMGGERLELSIGRNSRIEPATERDISGLPSFEELQEILY 644
Query: 422 SMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMW 481
+ +I L ++ M + LT ++ L SIK
Sbjct: 645 PLVNIED----LQEDSRNVMI--KGELTEMSGRRIL--------SIK------------- 677
Query: 482 YRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERI 541
C +CN+++ L C C +E ++ R+ D +GE I+ F EAE++
Sbjct: 678 ---CPSCNERL--ELSDENICNFCGALVDEPRYLLMIPGRIMDDTGEVLITFFGREAEKL 732
Query: 542 IGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKR 590
+G S E+ ++ +Q D+++ + +++++ V + + EYN E R
Sbjct: 733 LGMSTREVVDIINQSADESALEERVEDLNGVTVEVIGNADFDEYNEEPR 781
>gi|257053314|ref|YP_003131147.1| replication factor A [Halorhabdus utahensis DSM 12940]
gi|256692077|gb|ACV12414.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorhabdus
utahensis DSM 12940]
Length = 486
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L Q N T++ V +RT++ G EG V N+ + DE G +++ T++++ A +
Sbjct: 167 ALTMGQSNVTVEGVVLDTEPVRTFERDDGSEGRVANLSIGDETG-RVRVTLWDDRADR-- 223
Query: 238 DRFQLGKVYYISRGT-LRVANKQFKTVQNDYEMNLNENSEVEEAVN-ETAFIPQTKFNFV 295
V I GT + V + + D E+++ E ++E + + + P+T
Sbjct: 224 -------VEEIDAGTTVEVVDGYVRERDGDLEVHVGEEGAIDELDDADVEYAPET----T 272
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWN 355
PID+ V E VDI GVV++ PT + R +E K I + D+T + V+LW
Sbjct: 273 PIDD----VELDETVDIGGVVRSTDPTRTFDRDDGSEGQVKN-IRIQDDTD-DIRVALWG 326
Query: 356 ELA 358
E A
Sbjct: 327 EKA 329
>gi|413933200|gb|AFW67751.1| hypothetical protein ZEAMMB73_014842 [Zea mays]
Length = 252
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 461 KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVA 520
+P F A IS + D W+ AC C +K + SGY C C D + S + V
Sbjct: 3 QPQGFKCTATISRLIQDNKWWFPACTKC-RKSSPQTSSGYRCTSCGCTDVKFSYKLSFV- 60
Query: 521 RVCDGSGEAWISIFNEEAERIIGCSADEL 549
V DG+ EA F+ A+RI+G D L
Sbjct: 61 -VTDGTSEAEFFYFDTIAKRIVGKPCDTL 88
>gi|297722237|ref|NP_001173482.1| Os03g0429900 [Oryza sativa Japonica Group]
gi|255674608|dbj|BAH92210.1| Os03g0429900 [Oryza sativa Japonica Group]
Length = 187
Score = 49.7 bits (117), Expect = 0.005, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H L+S L+ N I RV+ N N +F+ +L DE GT I A ++
Sbjct: 3 HVLISQLSFGDSNKRILARVSRLWNFTDLNNHTK---IFHTDLVLLDEMGTSIHAQIYPP 59
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
K + KVYYI T+R AN+ ++ V N+ + ++ + +EE +N P
Sbjct: 60 ITEKMKPLLKEEKVYYIDSFTVRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPGIT 119
Query: 292 FNFVPIDEL 300
F+ P +++
Sbjct: 120 FSLTPFEDV 128
>gi|297819630|ref|XP_002877698.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323536|gb|EFH53957.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G NV L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNVILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|242085936|ref|XP_002443393.1| hypothetical protein SORBIDRAFT_08g018773 [Sorghum bicolor]
gi|241944086|gb|EES17231.1| hypothetical protein SORBIDRAFT_08g018773 [Sorghum bicolor]
Length = 389
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 13/193 (6%)
Query: 188 TIKVRVTSKGNMRTYKNARGEGCV--FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
+I VRV K TY G + + L DE G I + QL
Sbjct: 25 SICVRVMRKW---TYDGNETGGSIRYIGLVLADEKGNAIYGHIIERDVHTKGPLLQLDST 81
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGR-YV 304
Y I + ++ + + + Y + + V A N P+ +N P E+ Y
Sbjct: 82 YLIRKFYVKTSKSTYVLFEKKYMIEFTSFTTVTPAENPPDSFPKYVYNITPYSEINPVYP 141
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
+ T+ +D++G+V +V + R K+ ++P R+I + D + V ++ +
Sbjct: 142 SSTKYIDVLGIVTSVDNVVDQRVKNKERVIPMREILIKDLNLKKNHVPIYQP-------Q 194
Query: 365 LLDNADKSPIVAI 377
LD A P++ I
Sbjct: 195 PLDPASHEPVLPI 207
>gi|293336408|ref|NP_001170029.1| uncharacterized protein LOC100383940 [Zea mays]
gi|224033001|gb|ACN35576.1| unknown [Zea mays]
Length = 262
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 16/224 (7%)
Query: 285 AFIPQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV-- 341
AF+ T +N PID+L V+ E D++GVV +S S+R + V KR +T+
Sbjct: 19 AFLVCT-YNLTPIDQLQPRVDYKEYFTDVLGVVSVISQVSSVRTRGRQAEVMKRTVTISN 77
Query: 342 ADETKRTVTVSLWNELATNV-GQELLDNADKSP--IVAIKSLKVGDFQGISLSTLGRSTV 398
A +T TV V LW E AT +++ ++ SP I+ + +L +SLS
Sbjct: 78 ARDTGPTVDVVLWGERATTFPAEQVHRDSGSSPQIIIFVGTLVRSYADNVSLSGGSSCKW 137
Query: 399 LVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLG 458
++ +PE L++ E T+ + G A + L I
Sbjct: 138 YINEPVPEVNALRASAE-----TNHHPVIWDQGKAAAESTVIAVPEHKKLKDIKYLHPFE 192
Query: 459 DEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWC 502
++K + I + ++K D + WY ACK C + T G Y C
Sbjct: 193 NKKKEWLVI---VKVLKIDSSWWYNACKKC-LRTTKPHGDTYKC 232
>gi|326508252|dbj|BAJ99393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
+Y C+ CNKKV G+ ++C C+K E RY + +CD S ++F EA++
Sbjct: 12 YYIGCRKCNKKVQ-KQGNHFYCPKCEKEPENTCPRYKLKLEICDLSATTTCTMFEAEAKK 70
Query: 541 IIGCSA 546
+I SA
Sbjct: 71 LIKQSA 76
>gi|297851476|ref|XP_002893619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339461|gb|EFH69878.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKKFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|70936883|ref|XP_739325.1| replication factor a protein [Plasmodium chabaudi chabaudi]
gi|56516237|emb|CAH77169.1| replication factor a protein, putative [Plasmodium chabaudi
chabaudi]
Length = 255
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 27/251 (10%)
Query: 386 QGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDR 445
QG L + ++ V + P+L +A LK+W+ + K + + + S + N ++ S +
Sbjct: 1 QGKKLESHPKTKVEIDPELDKAYTLKNWWANNKKN--VYNTINLATSTSNNNMLNLESQK 58
Query: 446 VSLTHITSNPSLGDE-----KPVFFSIKAYISLIKPDQAMWYRACKTCNKKVT------- 493
++ I N +L +E K + F+ +I I + Y AC CNKK+
Sbjct: 59 -TIQEIKKNVNLANEEVLSGKGIIFTTFGFIDHIYNSIPV-YSACPNCNKKMVATVIEDG 116
Query: 494 -----DALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERII-GCSAD 547
+ + +C C KN+ Y + ++ D + +S F A+ I+ G SA+
Sbjct: 117 EQDMDENVSESMYCSKCNKNNIPV-YNYSINLKITDNTDSLRVSAFANAAKTIMNGLSAE 175
Query: 548 ELNELKSQ-LGDDNSYQMKLKEVTWV-PHLLRVSVAQQEYNNEKRQRVTVRAVAPVD--F 603
E +L+ + + +N L E + R+ + +E ++ T+ P+
Sbjct: 176 EFMKLRQEHISQENIENFDLIEKAKLNEFFFRIKAYMTSHMDEIKKNYTILETIPLSKLL 235
Query: 604 AAESKFLLEEI 614
++L++EI
Sbjct: 236 VDNCRYLIKEI 246
>gi|357470781|ref|XP_003605675.1| hypothetical protein MTR_4g036240 [Medicago truncatula]
gi|355506730|gb|AES87872.1| hypothetical protein MTR_4g036240 [Medicago truncatula]
Length = 480
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 129/324 (39%), Gaps = 21/324 (6%)
Query: 260 FKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI-DELGRYVNGTELVDIIGVVQN 318
+KT Y++N ++ A + + F FVPI D +G + LVD+IG++
Sbjct: 10 YKTTHYPYKLNFQFGTKCLPLCG--ALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTG 67
Query: 319 VSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
V + R N K ++ + + +L+ + L + +V+I+
Sbjct: 68 VG---TEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQ 124
Query: 379 SLKVGDFQ-GISLSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKN 436
KV FQ I + T L +P E K+ + S L LA
Sbjct: 125 LAKVKVFQDNIHIQNCLNCTRLKFNPVCVEGTAFKN------RMIENDDTPSPLTQLAVE 178
Query: 437 GARSMYSDRVSLTHITSNPSLGD--EKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTD 494
+ D + T T+ L D ++ ++ + ++ P+ WY CNK V
Sbjct: 179 PSIDPLQDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQIVNPEN--WYYTACMCNKSVYP 236
Query: 495 ALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKS 554
A G ++CE C ++ + RY + RV D S A +F+ +A + S ++ L++
Sbjct: 237 AEGM-HFCEKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADI--LET 293
Query: 555 QLGDDNSYQMKLKEVTWVPHLLRV 578
D+ ++ + +L +V
Sbjct: 294 HRADEGVLPTEIAALVNCTYLFKV 317
>gi|297838197|ref|XP_002886980.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332821|gb|EFH63239.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD++G + NV + + +++ + + + T + L
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNVRELVFVPSVEHSQ---GGYFELYFDLRDTECIHL 182
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + + I IK +K+ + + + G + ++++PDL
Sbjct: 183 ECRLTGDLAVEFYDLWKHRSRNTVICIIKFVKLELSQEHRWRCTNVTGSTRIMLNPDLSI 242
Query: 407 AKKLKSW 413
++ W
Sbjct: 243 TDEMLCW 249
>gi|297787922|ref|XP_002862165.1| hypothetical protein ARALYDRAFT_359788 [Arabidopsis lyrata subsp.
lyrata]
gi|297307359|gb|EFH38423.1| hypothetical protein ARALYDRAFT_359788 [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD++G + NV + + +++ + + + T + L
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNVRELVFVPSVEHSQ---GGYFELYFDLRDTECIHL 182
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + + I IK +K+ + + + G + ++++PDL
Sbjct: 183 ECRLTGDLAVEFYDLWKHRSRNTVICIIKFVKLELSQEHRWRCTNVTGSTRIMLNPDLSI 242
Query: 407 AKKLKSW 413
++ W
Sbjct: 243 TDEMLCW 249
>gi|385305379|gb|EIF49360.1| subunit of heterotrimeric replication protein a [Dekkera
bruxellensis AWRI1499]
Length = 90
Score = 48.5 bits (114), Expect = 0.010, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE-VTWVPHLLRVSVAQQEYNNEK 589
+++F+++A ++G SA+EL +LK + DNS + + E + + + RV YN
Sbjct: 1 MTLFDDQARVLVGLSAEELLKLKEESEVDNSLKNYVNEHIAFNEYSFRVRARLDSYNGID 60
Query: 590 RQRVTVRAVAPVDFAAESKFLLEEISK 616
R R +APVD++ E+ L++E K
Sbjct: 61 RARFNAVGLAPVDYSTEADALVDEFDK 87
>gi|297852034|ref|XP_002893898.1| hypothetical protein ARALYDRAFT_336658 [Arabidopsis lyrata subsp.
lyrata]
gi|297339740|gb|EFH70157.1| hypothetical protein ARALYDRAFT_336658 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 28/243 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+PL LNP W I+ +V + ++ +V L D+ G +I + E
Sbjct: 4 YPLSKLNPDTSEWRIRAKV-----LAIWQEYYDHYSTVDVVLVDDKGGKIHGIIPMELMP 58
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+F R + I+ LR K V + +E+ + + ++F
Sbjct: 59 QFSSRIVENRWIVITDFILRPVVDALKPVAHRFELERSGDG---------------FYDF 103
Query: 295 VPIDELGRYVNGTE----LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
V + GR +NG VDIIG NVS S + V + D ++R +
Sbjct: 104 V---DFGRILNGAHDTSICVDIIGKAINVSKITSFGCHVYEDQVEHIVFDLQDTSERVLR 160
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKK 409
L A + + + + I ++ ++V +G+ + + R S +L++P +P KK
Sbjct: 161 CVLSITDALPLYRLWMTDPSDVIICVLRFVRVEFREGMWICSGVRCSKLLLNPSIPGVKK 220
Query: 410 LKS 412
+KS
Sbjct: 221 MKS 223
>gi|402216670|gb|EJT96754.1| nucleic acid-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 430
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 38/267 (14%)
Query: 252 TLRVANKQFKTVQNDY---EMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
++R+ Q K + N E ++ NS +E + + IP I L GTE
Sbjct: 28 SVRLQETQAKYLWNGLLPIEAVVDHNSRIEFPLQDHG-IPPLSLELTKISLLRAMKVGTE 86
Query: 309 LVDIIGVVQNVSPTMSIRRKSN------------NEMVPK-----RDITVADETKRTVTV 351
V++IGVV +V ++ K E PK R++ + D++ V +
Sbjct: 87 -VNVIGVVLHVGEVEAMSEKKRVAGKSGDGESESEEEDPKGERMRREVQLVDDSAHVVRI 145
Query: 352 SLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLK 411
+LW + AT++ + I+ +K + + GISL+ ++ V P + E LK
Sbjct: 146 ALWKDRATSMA------VKRGSILLLKKVVIAAHGGISLNVHEKTKVDKDPKVAEGTSLK 199
Query: 412 SWYESEGKG-TSMASIGSGLGSLAKNGARSMYSDRVSLTHI--TSNPSLGDEKPV-FFSI 467
+WY + + I SG A +G + R S+ I +LG V F++
Sbjct: 200 NWYNNLASNPQTFRHISSGYS--AGSGLFTDIEPRSSVLTIPEVQKSNLGTSSRVDTFNV 257
Query: 468 KAYISLIKPDQAMWYRACKT--CNKKV 492
+ I ++ D Y AC+ CNK +
Sbjct: 258 EGRIQVV--DWNAVYEACRNTHCNKSI 282
>gi|414879411|tpg|DAA56542.1| TPA: hypothetical protein ZEAMMB73_367851 [Zea mays]
Length = 415
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 125/312 (40%), Gaps = 28/312 (8%)
Query: 188 TIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
T++V V + R + +G V +V+ LTD G I A + + + Q KV
Sbjct: 17 TVQVEVNRRWEFRGIGD---DGPVLHVDMILTDATGNAIYAELPAKLLEQKGSLLQSNKV 73
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
YYI R + A Q+K + + S +E + + P +N +P + + N
Sbjct: 74 YYIRRFRVANAKSQYKVIDAPLMIYFTVYSIIEVCRDPPSTFPLYVYNLIPYEAID--AN 131
Query: 306 GTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQEL 365
G + D +VS I+ + + R++ + + + + V+LW A E
Sbjct: 132 GPKSKDF-----HVSEINPIQLSGKSSIY--RNVFIKNLSNDIIKVTLWGNQALKFSYEA 184
Query: 366 LDNADKSPIVAIKSLKVG----DFQG-ISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG 420
+ D+ A+ L VG +++G + LS +P + EA+ +E
Sbjct: 185 I--YDQKIQHAVVVLFVGCLPKEYKGSVYLSGGAACHWYFNPSINEAQPYYQRIHNENVT 242
Query: 421 TSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP-SLGDEKPVFFSIKAYISLIKPDQA 479
+ + + + N + + D L + S P +L +E F I+ + D
Sbjct: 243 IKLPPLTNEQAAFV-NPPETQHKDLKEL--LESEPLTLPEEG---FKCTVTITRLLDDHP 296
Query: 480 MWYRACKTCNKK 491
WY+AC TC K
Sbjct: 297 WWYKACNTCPNK 308
>gi|297840769|ref|XP_002888266.1| hypothetical protein ARALYDRAFT_338521 [Arabidopsis lyrata subsp.
lyrata]
gi|297334107|gb|EFH64525.1| hypothetical protein ARALYDRAFT_338521 [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVLHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD++G + NV + + +++ + + + T + L
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNVRELVFVPSVEHSQ---GGYFELYFDLRDTECIHL 182
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + + I IK +K+ + + + G + ++++PDL
Sbjct: 183 ECRLTGDLAVEFYDLWKHRSRNTVICIIKFVKLELSQEHRWRCTNVTGSTRIMLNPDLSI 242
Query: 407 AKKLKSW 413
++ W
Sbjct: 243 TDEMLCW 249
>gi|402222068|gb|EJU02135.1| hypothetical protein DACRYDRAFT_15525 [Dacryopinax sp. DJM-731 SS1]
Length = 500
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 29/281 (10%)
Query: 286 FIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVP---KRDITVA 342
F + N V ++G V+ L+D +G + + ++ VP + ++ V
Sbjct: 174 FFSFSCLNMVEHLDIGELVDIMVLIDRMGGLFKSGVLAGAKATKGHQPVPSSTRCELWVM 233
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLST-LGRSTVLVS 401
D + + + LW+ + A ++ +KS + G L T + + VL
Sbjct: 234 DNSLTCMHIVLWDHAVHSF------EAAPGCMLVVKSAAISYLNGPCLKTDVAHTKVLTK 287
Query: 402 PDLPEAKKLKSWYESEG----KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHI---TSN 454
+ + L WY +G K M +G+ + NG + TH+ +
Sbjct: 288 YNNVATQALLFWYHHQGSKDKKKWQMI-----MGTYSSNGHADHQYIKAMETHMIKWATE 342
Query: 455 PSLGDEKPVFFSIKAYISLIKPDQAMWYRAC--KTCNK----KVTDALGSGYWCEGCQKN 508
+LG F ++A I L + Y C K+CNK +A GS Y C+ C N
Sbjct: 343 KNLGKLSCATFLVEANILLGTMCKDYIYLGCSFKSCNKIPMLDWRNADGS-YSCQQCGAN 401
Query: 509 DEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
+Y + +V DG+ E W F+ + ++G A +
Sbjct: 402 VPTLGPKYHLNFKVMDGTKECWCHAFSSASAHLLGVDAGTM 442
>gi|297838093|ref|XP_002886928.1| hypothetical protein ARALYDRAFT_338725 [Arabidopsis lyrata subsp.
lyrata]
gi|297332769|gb|EFH63187.1| hypothetical protein ARALYDRAFT_338725 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 28/243 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+PL LNP W I+ +V + ++ +V L D+ G +I + E
Sbjct: 4 YPLSKLNPDTSEWRIRAKV-----LAIWQEYYDHYSTVDVVLVDDKGGKIHGIIPMELMP 58
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+F R + I+ LR K V + +E+ + + ++F
Sbjct: 59 QFSSRIVENRWIVITDFILRPVVDALKPVAHRFELERSGDG---------------FYDF 103
Query: 295 VPIDELGRYVNGTE----LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
V + GR +NG VDIIG NVS S + V + D ++R +
Sbjct: 104 V---DFGRILNGAHDTSICVDIIGKAINVSKITSFGCNVYEDQVEHIVFDLQDTSERVLR 160
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKK 409
L A + + + + I ++ ++V +G+ + + R S +L++P +P KK
Sbjct: 161 CVLSITDALPLYRLWMTDPSDVIICVLRFVRVEFREGMWICSGVRCSKLLLNPSIPGVKK 220
Query: 410 LKS 412
+KS
Sbjct: 221 MKS 223
>gi|426199763|gb|EKV49687.1| hypothetical protein AGABI2DRAFT_176347 [Agaricus bisporus var.
bisporus H97]
Length = 371
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 54/291 (18%)
Query: 174 VHPLVSLNPYQGNW---TIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFN 230
V PL L N+ I+VRVT K + ++ + F + L DE G +
Sbjct: 67 VTPLAVLPFISTNFKIPCIQVRVTFKSRLHDPRHP-TQNLGFYIHLMDESGEVRAEVDTD 125
Query: 231 EAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE-------EAVNE 283
A + YDRFQ+G++Y I +K F + + NL + S ++ E +
Sbjct: 126 LLADEIYDRFQVGRLYNIYHS----GHKGFFEGRT-FLYNLKDRSLLDISSWTVIEECSV 180
Query: 284 TAFIPQTKFNFVPIDELGRY------------VNGTEL---VDIIGVVQNVSPTMSIRRK 328
+ +P +F+F PI L + N T L VD++ +V++VS
Sbjct: 181 ISRLPPYRFSFTPIPRLVKMERNDKITSTYDPYNDTLLTWSVDVLAIVKDVSVI------ 234
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWN----ELATNVGQ-------ELLDNAD--KSPIV 375
+ VP R + + D+++ + V L++ E G LL++ + +S
Sbjct: 235 DDTLKVPVRQVIIFDQSELELLVKLFSYNAEEFVARPGDIVAFRNAHLLEHVEHTQSKYY 294
Query: 376 A----IKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTS 422
A + S LS + STV + P++ E L+ WY G+S
Sbjct: 295 ADGGELMSHTTSPTYCNILSVITPSTVHLEPEVEERYALRRWYNMSFLGSS 345
>gi|297852510|ref|XP_002894136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339978|gb|EFH70395.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRLVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|297808999|ref|XP_002872383.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297818638|ref|XP_002877202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297836518|ref|XP_002886141.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297837869|ref|XP_002886816.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297852900|ref|XP_002894331.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318220|gb|EFH48642.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323040|gb|EFH53461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331981|gb|EFH62400.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332657|gb|EFH63075.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340173|gb|EFH70590.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|297790626|ref|XP_002863198.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309032|gb|EFH39457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 20 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLLIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 132 FVSI--LSGIVNPNICVDVVGKIVNV 155
>gi|297812473|ref|XP_002874120.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319957|gb|EFH50379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|357459975|ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355489317|gb|AES70520.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 323
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 11/232 (4%)
Query: 212 FNVE--LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM 269
F++E L D +G++I A++ KF + GKVY + +KT + Y++
Sbjct: 40 FSIEMVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKL 99
Query: 270 NLNENSEVEEAVNETAFIPQTKFNFVPI-DELGRYVNGTELVDIIGVVQNVSPTMSIRRK 328
N ++ A + + F FVPI D +G + LVD+IG++ V R
Sbjct: 100 NFQFGTKCLPLCG--ALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYER- 156
Query: 329 SNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF--Q 386
N K ++ + + +L+ + L + +V+I+ KV F +
Sbjct: 157 --NGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKRFVYE 214
Query: 387 GISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGA 438
SL+ R+T E K +S +E + KG S G G KN +
Sbjct: 215 SSSLNRFHRNTRCEFLTGSEELKHRSRWEKK-KGKSNLYRGRRRGQNRKNAS 265
>gi|297801328|ref|XP_002868548.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314384|gb|EFH44807.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 271
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ +++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 20 IASLNPNMGEWSVSMKI-----LNCWSVSRGSGRELNMILGDEHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + + + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLIIDEWVSIKNFDVSRVNSILRPIPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD+ G + NV + + +++ R + + T + L
Sbjct: 132 FVSI--LSGIVNPNICVDVFGKIVNVRELIFVPSVEHSQ---GRYFELYFGLRDTECIHL 186
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + + I IK +K+ + + + G + ++++PDL
Sbjct: 187 ECRLTGDLAVEFYDLWKHCSRNTVICIIKFVKLELSQEHRWRCTNVTGSTRIMLNPDLSI 246
Query: 407 AKKLKSW 413
++ W
Sbjct: 247 TDEMLCW 253
>gi|297795469|ref|XP_002865619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311454|gb|EFH41878.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 20 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 132 FVSI--LSGIVNPNICVDVVGKIVNV 155
>gi|297822347|ref|XP_002879056.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324895|gb|EFH55315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|357486475|ref|XP_003613525.1| hypothetical protein MTR_5g037660 [Medicago truncatula]
gi|355514860|gb|AES96483.1| hypothetical protein MTR_5g037660 [Medicago truncatula]
Length = 249
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAA 233
H +S ++P + +WT+ V+V + YKN + F++EL D+ G I+ T+
Sbjct: 5 HNFISNVSPRKQSWTLVVKVVRAWFGQDYKNKK---LPFSMELGDQIGASIRRTL----I 57
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
KF ++ Q G V+ IS + N ++ + +Y++N N++V+ ++ T +P ++
Sbjct: 58 YKFKNQLQEGMVFTISSFNVASNNDLYRPSRKEYKLNFTINTKVKLSI--TVLVPTNVYS 115
Query: 294 FVP 296
F P
Sbjct: 116 FTP 118
>gi|297840503|ref|XP_002888133.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333974|gb|EFH64392.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|357459981|ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
gi|355489320|gb|AES70523.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 701
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 143/372 (38%), Gaps = 37/372 (9%)
Query: 211 VFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN 270
V +++L G++I A++ KF + GKVY + +KT + Y++N
Sbjct: 200 VVSIQLAKVKGSKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLN 259
Query: 271 LNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSN 330
+ ++ +P+ G + LVD+IG++ V R
Sbjct: 260 VQFGTKC-----------------LPL--CGGSYDCDYLVDVIGMLTGVGTE---REYER 297
Query: 331 NEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GIS 389
N K ++ + + +L+ + L + +V+I+ KV FQ I
Sbjct: 298 NGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIH 357
Query: 390 LSTLGRSTVL-VSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSL 448
+ T L +P E K+ + S L LA + D +
Sbjct: 358 IQNCLNCTRLKFNPVCAEGTAFKN------RMIENDDTPSPLTQLAVEPSIDPLQDFLFN 411
Query: 449 THITSNPSLGD--EKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQ 506
T T+ L D ++ ++ + ++ P+ WY CNK V A G ++CE C
Sbjct: 412 TPRTTIQGLKDSQQEGMYVVLGTVKQIVNPEN--WYYTACMCNKSVYPAEGM-HFCEKCN 468
Query: 507 KNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKL 566
++ + RY + RV D S A +F+ +A + S ++ L++ D+ ++
Sbjct: 469 RHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADI--LETHRADEGVLPTEI 526
Query: 567 KEVTWVPHLLRV 578
+ +L +V
Sbjct: 527 GALVNCTYLFKV 538
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 212 FNVE--LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEM 269
F++E L D +G++I A++ KF + GKVY + +KT + Y++
Sbjct: 40 FSIEMVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKL 99
Query: 270 NLNENSEVEEAVNETAFIPQTKFNFVPI-DELGRYVNGTELVDIIGVVQNV 319
N ++ A + + F FVPI D +G + LVD+IG++ V
Sbjct: 100 NFQFGTKCLPLFG--ALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTGV 148
>gi|448664770|ref|ZP_21684408.1| replication factor A [Haloarcula amylolytica JCM 13557]
gi|445774357|gb|EMA25378.1| replication factor A [Haloarcula amylolytica JCM 13557]
Length = 488
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L Q + T++ V +RT+ G EG V N+ L DE G +I+ T++++ A +
Sbjct: 167 ALTMGQSDVTLRGLVLDTDTIRTFDRDDGSEGRVSNLTLGDETG-RIRVTLWDDRADR-A 224
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ G I G +R + E+++ + V+E ++ AF P PI
Sbjct: 225 EELDAGAAVEIIDGYVRERDGSL-------ELHVGDQGAVDEVEDDVAFEPDAD----PI 273
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
E V E VDI GVV++ P + R +E R++ + D T + V+LW +
Sbjct: 274 AE----VELEETVDIAGVVRSADPKRTFDRDDGSEG-QVRNVRIQDATG-DIRVALWGDK 327
Query: 358 A 358
A
Sbjct: 328 A 328
>gi|357478785|ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355510733|gb|AES91875.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 893
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 152/379 (40%), Gaps = 54/379 (14%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M ++ + ++P + NW I+VRV +R K + +++E+ D +++
Sbjct: 1 MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKK---DQLPYSLEMVLMDNKELKE--- 54
Query: 230 NEAARKFYDRFQLGKVYYISRGTLRVANK--QFKTVQNDYEMNLNENSEVEEAVNETAFI 287
DR S G VA+ ++T ++ Y++N +++++ + F+
Sbjct: 55 --------DRV-------FSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQC--DDKFV 97
Query: 288 PQTKFNFVPIDELGRYVNGTE-LVDIIGVVQNVSPTMSIRRK-SNNEMVP-KRDITVADE 344
P + E+ + T+ L+D++G+++ V S R S ++M+P ++ T
Sbjct: 98 PADIYVIGDPREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKMIPIEKSYTRNGS 157
Query: 345 TKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDL 404
+ + + +D + + Q +T+ + VL +P
Sbjct: 158 QYFFLNCCIRFRFKVTLFGPYVDELNAF---------LASGQATIQNTINATKVLFNPTF 208
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGD-EKPV 463
A L+ S G+ + + S+ D ++L+ +T+ L D +
Sbjct: 209 TAALLLRKRMVENDDSPS-----PGISKITEASKVSVEEDFLNLSPMTTVEGLKDCAEEK 263
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVC 523
FF++ +++I D WY +C CNKKV Y+C C K + +V
Sbjct: 264 FFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPD-EKMYFCSKCNK----------YMIKVV 312
Query: 524 DGSGEAWISIFNEEAERII 542
D + A +F+ +A +
Sbjct: 313 DHTDSATFVLFDRDAAELF 331
>gi|297790385|ref|XP_002863086.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297792251|ref|XP_002864010.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297798330|ref|XP_002867049.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297801550|ref|XP_002868659.1| hypothetical protein ARALYDRAFT_355953 [Arabidopsis lyrata subsp.
lyrata]
gi|297835460|ref|XP_002885612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308903|gb|EFH39345.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309845|gb|EFH40269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312885|gb|EFH43308.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314495|gb|EFH44918.1| hypothetical protein ARALYDRAFT_355953 [Arabidopsis lyrata subsp.
lyrata]
gi|297331452|gb|EFH61871.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|321456582|gb|EFX67685.1| hypothetical protein DAPPUDRAFT_330783 [Daphnia pulex]
Length = 182
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 39/168 (23%)
Query: 251 GTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELV 310
++ AN ++ +++N YE+ N+N+ + N++ +V
Sbjct: 43 AAVKPANNKYSSMRNGYEITFNQNTALPNLENDS------------------------IV 78
Query: 311 DIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNAD 370
D+IG+V S + I +K N++ + + T VT+SL +L
Sbjct: 79 DVIGLVLYSSEFVFIDKK--NKVSRFLEAKLVGSTNTEVTLSLLGKLV------------ 124
Query: 371 KSPIVAIKSLKV-GDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESE 417
IVA K +K+ +F G L TL + V V+P + EA +L+ WY +E
Sbjct: 125 DQRIVAYKGVKISNNFGGCYLETLSSTVVQVNPAMNEAHQLREWYNNE 172
>gi|297788601|ref|XP_002862376.1| hypothetical protein ARALYDRAFT_359652 [Arabidopsis lyrata subsp.
lyrata]
gi|297835698|ref|XP_002885731.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297307827|gb|EFH38634.1| hypothetical protein ARALYDRAFT_359652 [Arabidopsis lyrata subsp.
lyrata]
gi|297331571|gb|EFH61990.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIFNV 151
>gi|294875670|ref|XP_002767428.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868995|gb|EER00146.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 162
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
Query: 477 DQAMWYRACKT-----------CNKKVTDALGSGYW-C-EGCQKNDEECSLRYIMVARVC 523
D+ ++Y +C T C+KKV + +G W C EG Q + +C RYI+ ++
Sbjct: 43 DKPLYYTSCITEIPDGRGGIRKCSKKVEQDISTGTWSCIEGHQ--NPQCMPRYIISIKLA 100
Query: 524 DGSGEAWISIFNEEAERIIGCSADEL 549
D SGE + F+E+A+ ++G SA +
Sbjct: 101 DISGEVMVRAFDEQAQALLGVSAQNM 126
>gi|397636131|gb|EJK72158.1| hypothetical protein THAOC_06337, partial [Thalassiosira oceanica]
Length = 436
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 5 VSPDAISTILSNPSPDSSSDIPE-IVVQVLDLKLTGNRY-MFNASDGKKRLKAILPSNLS 62
++P+A+ + + + + P V+QVL L+L GN + + SDGK L L +L+
Sbjct: 151 LTPNAVHNMYTTMGNEEARGAPHKPVLQVLRLELEGNGFWCLDLSDGKNYLSGSLNPSLA 210
Query: 63 SEVISGNIQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSP 104
V I+ +R+L++ + E P +Y +V + E P
Sbjct: 211 HLVNDSTIEQYSTVRILEFVVEESPDNGGRYCLVYEAETAGP 252
>gi|11994675|dbj|BAB02913.1| unnamed protein product [Arabidopsis thaliana]
Length = 354
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 403 DLPEAKKLKSWYESEG-KGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
D+ E K+ +W G K ++AS S + L ++ H ++ L
Sbjct: 91 DIHETKQFLTWLGDSGLKTPTIASSSSAVTKLETVTINEIHQ----FLHNENHRKLAS-- 144
Query: 462 PVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVAR 521
P + Y KP +Y +C N K+ A S Y C C++ + + Y R
Sbjct: 145 PALLQLWTY----KPQHGWYYISCSISNNKLQQADTSMY-CNKCKEYNNVGLISYRFEMR 199
Query: 522 VCDGSGE-AWISIFNEEAERIIGCSA-DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVS 579
+ D +G+ + N EA +I G +A D LNE G DN +K + H++ S
Sbjct: 200 LRDRNGDVGTFVVLNGEATKIAGKNARDVLNECIEAAGKDNCEGIKTTIPECLKHIIGCS 259
Query: 580 VAQQ----EYN-NEKRQRVTVRAVAPVDFAAESK 608
Q +YN N RQ +T+ + A+ S+
Sbjct: 260 CKFQIKLTKYNFNTSRQTITISRIIDTQIASLSE 293
>gi|414888072|tpg|DAA64086.1| TPA: hypothetical protein ZEAMMB73_996720 [Zea mays]
Length = 238
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 18/211 (8%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAA 233
PL +L N ++++V K R A G + +++ LTD G I + + A
Sbjct: 5 PLSALTLQDRNAEVQIQVHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
D FQ+GK+Y ++R ++ A +K V D + + + +E + P ++
Sbjct: 62 ATRGDEFQVGKIYKMTRFSVARAKSTYKPVDGDLMLYVKPYTTLELCHTSPSGFPLYVYH 121
Query: 294 FVPIDEL---GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK---RDITVADETKR 347
D++ G N D++G++ +S + N +P R + + + +
Sbjct: 122 LTSYDKIDPDGS--NARNFHDVLGIITEISAIKPV----GNAHIPSSYNRHVLIKNLSDD 175
Query: 348 TVTVSLWNELATNVG-QELLDNADKSPIVAI 377
+ ++LW + A D ++PIV +
Sbjct: 176 ILKITLWGKRAQEFSLTNTYDPQKQTPIVVL 206
>gi|297846072|ref|XP_002890917.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336759|gb|EFH67176.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 235
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQI+A + +E +
Sbjct: 20 IASLNPNMGEWSVSVKI-----LNCWSVSRGSGRELNMILGDEHFTQIEAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 132 FVSI--LSGIVNPNICVDVVGKIVNV 155
>gi|358343841|ref|XP_003636004.1| Replication protein A1-like protein [Medicago truncatula]
gi|355501939|gb|AES83142.1| Replication protein A1-like protein [Medicago truncatula]
Length = 540
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 176/438 (40%), Gaps = 48/438 (10%)
Query: 170 MTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMF 229
M R V L +N + W + V+VT K ++ E + D GT IQ +
Sbjct: 1 MLRPVAFLRDINEKKDFWKVAVKVTDKWSVVKDGMEHMEMVI-----VDAKGTDIQV-II 54
Query: 230 NEAARKFYDRF-QLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
A R Y++ ++ Y +S + + FK N Y++ + +A +P
Sbjct: 55 PTAYRAEYEKLIKVNSTYTLSNFQVFPNDLVFKASDNKYKLKWTGGTTAVDANVHDIPLP 114
Query: 289 QTKFNFVPIDEL--GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
KF P+ E+ G++ LV +IG V + + V + + D +
Sbjct: 115 NMKFK--PLAEIIAGKW-RADLLVHVIGYVHEIGYCQVMAGTGKKLQV---NFLMKDLSD 168
Query: 347 RTVTVSLWNELATNVGQELLDNADKSP-IVAIKSLKVGDFQGISLS---TLGRSTVLVSP 402
++ +LW + A + +N + P IV +K K+ + LS T + +L++
Sbjct: 169 ISLNCTLWEDYAAKFIKFNNENKETGPIIVMLKYGKIKEEGKYPLSVTNTYSATKLLINE 228
Query: 403 DLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNP---SLGD 459
D+ E K+ + ES K + S + + +++ ++ + D + SNP L D
Sbjct: 229 DIAEIKRFR---ESLPKDDQLMSQTQLVCTQSQSSSQFITDD-----DLLSNPLIMPLAD 280
Query: 460 ----EKPVFFSIKAYISLIKPDQAMWYR-ACKTCNKKVTDALGSGYWCEGCQKNDEECSL 514
++ + A + + + WY AC C K+ Y CE + E +
Sbjct: 281 ILQLQEISYCVTVAEVEKVNSTKFGWYYFACFKCG-KIAKGDNPPYTCESGHNTETEI-V 338
Query: 515 RYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL--NELKSQLGDDNSYQMKLK----- 567
RY + V + + +++ EA +++G SA +L N +++ + + Y M L
Sbjct: 339 RYKLDLNVSYENTKGTFVMWDREATQLLGISAAQLRTNMIQAGITNRLEYPMLLDGIGEK 398
Query: 568 ----EVTWVPHLLRVSVA 581
+V W P SV
Sbjct: 399 TYVFKVKWQPKWKTTSVV 416
>gi|297791695|ref|XP_002863732.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309567|gb|EFH39991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
FV I L VN VD++G + N+ + + +++ + + + T + L
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNMRELVFVPCVEHSQ---GGYFELYFDLRDTECIHL 182
Query: 354 WNELATNVGQELLD----NADKSPIVAIKSLKV---GDFQGISLSTLGRSTVLVSPDLPE 406
L ++ E D + + I IK +K+ + + + G + ++++PDL
Sbjct: 183 ECRLTGDLAVEFYDLWKHRSRNTVICIIKFVKLELSQEHRWRCTNVTGSTRIMLNPDLSI 242
Query: 407 AKKLKSW 413
++ W
Sbjct: 243 TDEMLCW 249
>gi|448684242|ref|ZP_21692707.1| replication factor A [Haloarcula japonica DSM 6131]
gi|445783115|gb|EMA33951.1| replication factor A [Haloarcula japonica DSM 6131]
Length = 486
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L Q + +++ V ++RT+ G EG V N+ L DE G +I+ T++++ A +
Sbjct: 167 ALTMGQSDVSLRGLVLDTDSIRTFDRDDGSEGRVSNLTLGDETG-RIRVTLWDDRADR-A 224
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ G I G +R + E+++ + V+E ++ AF P PI
Sbjct: 225 EELDAGAAVEIIDGYVRERDGSL-------ELHVGDQGAVDEVEDDVAFEPDAN----PI 273
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
E V E VDI GVV++ P + R +E R++ + D T + V+LW +
Sbjct: 274 SE----VELEETVDIAGVVRSADPKRTFDRDDGSEG-QVRNVRIQDATG-DIRVALWGDK 327
Query: 358 A 358
A
Sbjct: 328 A 328
>gi|448627026|ref|ZP_21671701.1| replication factor A [Haloarcula vallismortis ATCC 29715]
gi|445759654|gb|EMA10930.1| replication factor A [Haloarcula vallismortis ATCC 29715]
Length = 490
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L Q + T++ V +RT+ G EG V N+ L DE G +I+ T++++ A +
Sbjct: 167 ALTMGQSDVTLRGLVLDTDTIRTFDRDDGSEGRVSNLTLGDETG-RIRVTLWDDRADR-A 224
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ G I G +R + E+++ + V+E ++ AF P PI
Sbjct: 225 EELDSGAAVEIIDGYVRERDGSL-------ELHVGDQGAVDEVEDDVAFEPDAD----PI 273
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
E+ E VDI GVV++ P + R +E R++ + D T + V+LW +
Sbjct: 274 AEVALE----ETVDIAGVVRSADPKRTFDRDDGSEG-QVRNVRIQDATG-DIRVALWGDK 327
Query: 358 A 358
A
Sbjct: 328 A 328
>gi|356522930|ref|XP_003530095.1| PREDICTED: uncharacterized protein LOC100803351 [Glycine max]
Length = 370
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 411 KSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
+S ++S G+G++ S GS+ + S + + T ++ + E+ V ++
Sbjct: 95 RSSFKSHGEGSTQLS-----GSIQLSSKESFFGKAEAKT--IADINTISEEIVCVTVGTI 147
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW 530
++ + + Y AC C+KK +D + + C C K ++E LRY + + G+
Sbjct: 148 TRIVLDNHSWCYTACIQCHKK-SDVEMAPFTC-ACDKYNKEVVLRYRLEVMINQGNESTK 205
Query: 531 ISIFNEEAERIIGCSADELNELKSQLGD 558
+++ E +IG SAD +N+LK + GD
Sbjct: 206 FLLWDHECSELIGQSADAVNKLKIEDGD 233
>gi|297837857|ref|XP_002886810.1| hypothetical protein ARALYDRAFT_338615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332651|gb|EFH63069.1| hypothetical protein ARALYDRAFT_338615 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 28/243 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+PL LNP W I+ +V + ++ +V L D+ G +I + E
Sbjct: 4 YPLSKLNPDTSEWRIRAKV-----LAIWQEYYDHYSTVDVVLVDDKGGKIHGIIPMELMP 58
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+F R + I+ LR K V + +E+ + + ++F
Sbjct: 59 QFSSRIVENRWIVITDFILRPVVDALKPVAHRFELERSGDGF---------------YDF 103
Query: 295 VPIDELGRYVNGTE----LVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
V + GR +NG VDIIG NVS S + V + D ++R +
Sbjct: 104 V---DFGRILNGAHDTSICVDIIGKAINVSKITSFGCHVYEDQVEHIVFDLQDTSERVLR 160
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKK 409
A + + + + I ++ ++V +G+ + + R S +L++P +P+ KK
Sbjct: 161 CVSSITDALPLYRLWMTDPSDVIICVLRFVRVEFREGMWICSGVRCSKLLLNPSIPDVKK 220
Query: 410 LKS 412
+KS
Sbjct: 221 MKS 223
>gi|297838113|ref|XP_002886938.1| hypothetical protein ARALYDRAFT_338733 [Arabidopsis lyrata subsp.
lyrata]
gi|297332779|gb|EFH63197.1| hypothetical protein ARALYDRAFT_338733 [Arabidopsis lyrata subsp.
lyrata]
Length = 271
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 20 IASLNPNIGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 132 FVSI--LSGIVNPNICVDVVGKIVNV 155
>gi|14591637|ref|NP_143719.1| replication factor A [Pyrococcus horikoshii OT3]
gi|3258332|dbj|BAA31015.1| 361aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 361
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 457 LGDEKP--VFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSL 514
+GD +P F I+ I+ K + + Y AC C KKV G+G W C ++ E +
Sbjct: 193 IGDIEPGDRFIEIRGTIA--KVYRVLTYDACPECKKKVDYDPGTGVWI--CPEHGEVEPI 248
Query: 515 RY-IMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQL 556
+ I+ + DG+G +++F ++AE ++G S++E+ E +L
Sbjct: 249 KMTILDFGLDDGTGYIRVTLFGDDAEELLGVSSEEIAEKIKEL 291
>gi|77556294|gb|ABA99090.1| hypothetical protein LOC_Os12g32690 [Oryza sativa Japonica Group]
Length = 1312
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 80 DYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIV 139
D ++ IP+K ++YL C+ +S + E + I + P+ + + +
Sbjct: 544 DCIVDMIPSKPKEYL---SCDTISKSSEHLPDFD-------IFYPPEFLNSINVNN---- 589
Query: 140 LKPKQEMVAKSAAQ--ILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKG 197
P ++V K Q I++ + G + + SL GN T+++R++
Sbjct: 590 -FPSHKLVLKKDCQDGIVKAKMGELQ-------------IASLELSDGNPTLRIRIS--- 632
Query: 198 NMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRV 255
+ Y + E + ++ L D+ G+ I A ++ +KF GKVY ++ ++
Sbjct: 633 RLWEYHDQNDETNLHHIGLVLVDQKGSSIAAMIYPPCDKKFKPLITEGKVYLLTYYRVKP 692
Query: 256 ANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVN 305
K + V N + S VEE V+ Q ++ P +EL V+
Sbjct: 693 CTKHYWPVDNKLAITFTWWSTVEECVDVPDNFAQYAYSLTPFNELRSLVD 742
>gi|402223681|gb|EJU03745.1| hypothetical protein DACRYDRAFT_105902 [Dacryopinax sp. DJM-731
SS1]
Length = 432
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 268 EMNLNENSEVEEAVNETAFIPQ----TKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
E ++ NS +E + + + P TK + + ++G VN +V +G V+ +S
Sbjct: 49 EAVVDHNSRIEFPLQDHSIPPLSLELTKISLLRATKVGTEVNIIGVVLHVGKVEAMSEKK 108
Query: 324 SIRRKSNN------EMVPK-----RDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
+ RKS + E PK R++ + D++ + V+LW + AT++ +
Sbjct: 109 RVARKSGDGESKSKEEDPKGERVRREVQLVDDSAHIMCVALWKDCATSMAMK------HG 162
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKG-------TSMAS 425
I+ +K + + GISL+ ++ V + E LK+WY + +S S
Sbjct: 163 SILLLKKVVIAAHDGISLNMYKKTKVDKDLKVAEGTSLKNWYNNLASNPQTFQHISSSYS 222
Query: 426 IGSGL 430
GSGL
Sbjct: 223 TGSGL 227
>gi|387965705|gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein
[Beta vulgaris subsp. vulgaris]
Length = 2037
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 469 AYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSL-------------- 514
A I ++ + +Y ACK CNKKV C+G Q ++ L
Sbjct: 252 ATIVCVQFEYGWFYLACKKCNKKVVVEGEIKTECDGDQSDNGTTKLLIIPFGVDIVVNKI 311
Query: 515 ------RYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
R+ + RV DGSG A +F+ E + I+ SA ++N + + D +Y +L
Sbjct: 312 CINIVDRFKIQVRVVDGSGSASFVMFDREVKSIVHKSASDVNVSLTNIIDSETYPEELNA 371
Query: 569 VTWVPHLLRVSVAQQEYN 586
+ L +V V+ EYN
Sbjct: 372 LVNRRFLFKVEVS--EYN 387
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 169 AMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATM 228
+M + H + + P + +W IK+R+ ++ N +G + V L +E G +IQA +
Sbjct: 31 SMNQEHHFVGDITPIKDSWNIKIRIIRLWKTPSFANPTEDGSIEMVFL-NEKGDKIQAIV 89
Query: 229 FNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
R+F G++ I+ + N ++ + Y++N N+ V+ + IP
Sbjct: 90 KKLLIRRFSHLLAEGQLRVINNFGVAQNNGSYRLTSHPYKINFLLNTRVQNC--DDLPIP 147
Query: 289 QTKFNFVPIDEL 300
NF D++
Sbjct: 148 LHGLNFASFDDI 159
>gi|414587963|tpg|DAA38534.1| TPA: hypothetical protein ZEAMMB73_990141 [Zea mays]
Length = 372
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 85/213 (39%), Gaps = 27/213 (12%)
Query: 348 TVTVSLWNELATNVG-QELLDNADKSPIVAIKSLKVG----DFQGIS-LSTLGRSTVLVS 401
++ ++LW A+N ++ + + PIV L VG F+G LS S+ +
Sbjct: 2 SLKITLWGNQASNFSISDVYNQSSNQPIVI---LLVGFLAKRFKGQPYLSGTTASSWYFN 58
Query: 402 PDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
P +PEA+ Y S + + I S +L H T L D
Sbjct: 59 PGIPEAQT----YYSRLQNNDLQLIQPTAAE-----EEIQVSQPPNLEHKTVE-ELLDID 108
Query: 462 PVFFSIKAY-----ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
P F + Y IS I + WY +C C+K + +GY C C D + RY
Sbjct: 109 PDMFPPEGYRCTVTISRIVQNSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRY 165
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
+ DG+ EA F+ A +I+G D L
Sbjct: 166 KLSFIATDGTCEAEFFCFDSIARKIVGKPCDNL 198
>gi|414878961|tpg|DAA56092.1| TPA: hypothetical protein ZEAMMB73_624890 [Zea mays]
Length = 296
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 10/207 (4%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L +L P++ + I+V ++ K ++ A G + +V+ L+D +G I A + A
Sbjct: 6 LPNLAPHKIHAKIQVHISRKW---LFQGATDSGPLQHVDMVLSDREGNAIYAEIPRNLAE 62
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + G VY ISR + FK V D + ++ V+ A + P +
Sbjct: 63 QKAINIEEGGVYDISRFRVCATKTVFKIVDGDKMIQFTFHTIVKRATSAPTTFPLYAYWL 122
Query: 295 VPIDELGRYVNGT-ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
D++ +V T VD++GV+ + + +S R I + D ++ T T+ L
Sbjct: 123 TLFDQIEPHVQTTNNFVDVLGVITEIHELTPVHVRSQLTPTVTRTIIIKDLSQSTKTIVL 182
Query: 354 WNELATNVGQELLDNADKSPIVAIKSL 380
+L N+ + PIV KSL
Sbjct: 183 --QLPQNLQHP--PAMETKPIVEHKSL 205
>gi|297849862|ref|XP_002892812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338654|gb|EFH69071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 586
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 113/241 (46%), Gaps = 21/241 (8%)
Query: 180 LNPYQGNWTIKVRVTSKGNMRTYKNARGE-GCVFNVELTDEDGTQIQATMFNEAARKFYD 238
++P + IKV++ ++ ++ + E G + L DE GT++ AT+ ++ KF
Sbjct: 15 IDPAAQRYKIKVQI-----VKLWRGFQKETGSAIEMVLIDEKGTRMHATVEDKLMNKF-- 67
Query: 239 RFQLGKVYYISRGTLRVANKQF--KTVQNDYEMNLNENSEVEEAVNETAFIPQTKF-NFV 295
+ L + I T ++ N F KT + ++++ + V + +P+ F +F+
Sbjct: 68 KSDLKEDQSILVDTFQLVNNGFEYKTSPHSFKISFFRTTSVTICDDFPNDVPEKYFVDFL 127
Query: 296 PIDELGRYVNGTELVDIIGVVQNVSPT--MSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
I L ++ LVD+IG + N+ P + IR +S ++ D+ + D + +
Sbjct: 128 KI--LAGVLDSKTLVDVIGHIVNIGPLEDIMIRGRSTTKL----DVELRDTNDARLLCTF 181
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQG-ISLSTLGRST-VLVSPDLPEAKKLK 411
W + A V +++ + ++ ++ +F+G S+S ST +L+ P A + +
Sbjct: 182 WGKYADQVSTYAAEHSADMIVCVVRFAQIKEFRGNRSISNSYNSTRILLDPQTKVAHEFR 241
Query: 412 S 412
S
Sbjct: 242 S 242
>gi|321465732|gb|EFX76731.1| hypothetical protein DAPPUDRAFT_321917 [Daphnia pulex]
Length = 140
Score = 46.6 bits (109), Expect = 0.041, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 16/131 (12%)
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
IP K +F +D+ +++++IG + + ++I+ + KR+I + D++
Sbjct: 18 IPFYKHHFTALDKCQE---SGKIIEVIGGLYEIGEIITIKTAKAST---KREIKIIDQSY 71
Query: 347 RTVTVSLWNELATN--VGQELLDNADKSPIVAIKSLKVGDFQ----GISLSTLGRSTVLV 400
VT+++WN +A + E L++ IVA +K+ F I L + + V +
Sbjct: 72 NKVTITMWNTIAEKFIIAVEKLEDV----IVAFAGIKISTFSREDGEIFLDSFDDTLVSI 127
Query: 401 SPDLPEAKKLK 411
+PD+PE+ +LK
Sbjct: 128 NPDIPESAELK 138
>gi|169234834|ref|NP_001108505.1| meiosis-specific with OB domain-containing protein [Rattus
norvegicus]
gi|189082697|sp|B0BMX9.1|MEIOB_RAT RecName: Full=Meiosis-specific with OB domain-containing protein
gi|165970934|gb|AAI58605.1| LOC681837 protein [Rattus norvegicus]
Length = 470
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 181/437 (41%), Gaps = 46/437 (10%)
Query: 166 ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY---KNARGEGCVFNVELTDEDGT 222
A+ + L L+P N I V K +++ + KN E F+ + D
Sbjct: 2 AKFFALKNFTALSDLHPNMANLKIIGIVIGKTDVKGFPDRKNIGSERYTFSFTIRDSPNH 61
Query: 223 QIQATMFN--EAARKFYDRFQLGKVYYISRGTLRVANKQFK-----TVQNDYEMNLNENS 275
+ + + + R D F++G+ I ++ + + ++Y++ L+EN
Sbjct: 62 FVNVSSWGSEDYIRSLSDNFKVGECVIIENPLIQRKETEREERFSPATPSNYKLLLSENH 121
Query: 276 ---------EVEEAVNETAFIP----QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSP- 321
EV+ + +P + ++ I G ++G +++++ V++V
Sbjct: 122 SMVKVCSPYEVDTKLLSLIHLPVKESRDYYSLADIVANGHSLDG-RIINVLAAVRSVGEP 180
Query: 322 ---TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIK 378
T S RRK + ++ + DET+ + T++ W+ + + Q + A ++ I A
Sbjct: 181 KYFTTSDRRKGQ-----RCEVKLFDETEPSFTMTCWDNESILLAQSWM--ARETVIFASD 233
Query: 379 -SLKVGDFQGISLST-LGRSTVLVSPDLPEAKKLKSWYESEGKGTSMAS-IGSGLG-SLA 434
+ FQ +T + ++ + V+PD PEA L ++ E K TS+A I S L S+
Sbjct: 234 VRINFNKFQNCMAATVISKTIITVNPDTPEANILLNFIR-ENKETSIADEIDSYLKESVN 292
Query: 435 KNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQ---AMWYRACKTCNKK 491
N ++Y+ V + + G P + + AYIS + D + C +C
Sbjct: 293 LNTIVNVYT--VEQLKGKALENEGKVDPFYGILYAYISTLNIDDETTKVVRNRCSSCGYI 350
Query: 492 VTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAW-ISIFNEEAERIIGCSADELN 550
V DA + C L + ++ + D +G S+ AE +GC+ +E
Sbjct: 351 VNDASNTCTICSKDSSRSRSFCLSFDVLVDLTDHTGTLRSCSLSGSVAEETLGCTINEFL 410
Query: 551 ELKSQLGDDNSYQMKLK 567
+ S+ +Q+ L+
Sbjct: 411 TMTSEQKTKLKWQLLLE 427
>gi|297798782|ref|XP_002867275.1| hypothetical protein ARALYDRAFT_913278 [Arabidopsis lyrata subsp.
lyrata]
gi|297313111|gb|EFH43534.1| hypothetical protein ARALYDRAFT_913278 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE G++IQA++ + KF + GK + L +F++ + Y++N +
Sbjct: 46 LVDEKGSRIQASVKGKLLDKFQKDLKEGKCCVLMNFELCPNLGKFRSCDHPYKINFIFYT 105
Query: 276 EVEEAVNETAFIP--QTKFNFVPIDE-LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNE 332
V + IP + FN P E L R + T +DIIG + ++ SI
Sbjct: 106 ----CVKPSEEIPNLEACFNLCPFPEILARRNDDTIFIDIIGEIVGMNEVKSITTAEGPT 161
Query: 333 MVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVA 376
+ ++ + D + V+LW +LA +V N +K P VA
Sbjct: 162 KL--LNLQLKDLGDSLIDVALWGKLAEDV----YSNVEKGPCVA 199
>gi|321464047|gb|EFX75058.1| hypothetical protein DAPPUDRAFT_108305 [Daphnia pulex]
Length = 311
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 289 QTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT 348
Q+ + P + +G + + +++IG + + ++I+ + KR+I + D++
Sbjct: 185 QSLYGIFP-NVVGLKMISSYFIEVIGGLYEIGEIITIKTAKAS---TKREIKIIDQSYNK 240
Query: 349 VTVSLWNELATN--VGQELLDNADKSPIVAIKSLKVGDFQ----GISLSTLGRSTVLVSP 402
T+++WN +A + E L++ +VA +K+ F I L + + V ++P
Sbjct: 241 FTITMWNTIAEKFIIAVEKLEDV----VVAFTGIKISTFSREDGEIFLDSFDDTLVSINP 296
Query: 403 DLPEAKKLKSWYESE 417
D+PE+ +LK W + +
Sbjct: 297 DIPESAELKRWLKQQ 311
>gi|440292825|gb|ELP86002.1| hypothetical protein EIN_234190 [Entamoeba invadens IP1]
Length = 344
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
R++ P + N TIK RV SK N+ + G F L D + ++ ++
Sbjct: 138 RKITPFAVITTMTNNVTIKGRVISKSNIT--RTVTGTKLCF--LLQDANENEMTVNCYDN 193
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP-QT 290
+ +D FQ+G VY+I +QFK +++ ++L E E++ + T IP Q
Sbjct: 194 ECEQAFDMFQVGSVYFI-------YCRQFKEIKS--SIHLRE-KEIDVNMTYTCEIPTQE 243
Query: 291 KFNFVP----IDELGRYVNGT--ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADE 344
N +P I + N T +L D+ GVV ++ ++ + R I V D+
Sbjct: 244 SENDIPSKGLITTISYLKNATVEKLYDVSGVVIKINKEDNVTKGGK----VYRTILVVDQ 299
Query: 345 TKRTVTVSLWNELAT 359
+ + + W + +T
Sbjct: 300 SNYIIEIKFWGDTST 314
>gi|297852146|ref|XP_002893954.1| hypothetical protein ARALYDRAFT_336728 [Arabidopsis lyrata subsp.
lyrata]
gi|297339796|gb|EFH70213.1| hypothetical protein ARALYDRAFT_336728 [Arabidopsis lyrata subsp.
lyrata]
Length = 271
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ +++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 20 IASLNPNMGEWSVSMKI-----LNCWSVSRGSGRELNMILGDEHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + + + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLIIDEWVSIKNFDVSRVNNILRPIPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD+ G + NV
Sbjct: 132 FVSI--LSGIVNPNICVDVFGKIVNV 155
>gi|414888071|tpg|DAA64085.1| TPA: hypothetical protein ZEAMMB73_996720 [Zea mays]
Length = 191
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 9/186 (4%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAA 233
PL +L N ++++V K R A G + +++ LTD G I + + A
Sbjct: 5 PLSALTLQDRNAEVQIQVHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
D FQ+GK+Y ++R ++ A +K V D + + + +E + P ++
Sbjct: 62 ATRGDEFQVGKIYKMTRFSVARAKSTYKPVDGDLMLYVKPYTTLELCHTSPSGFPLYVYH 121
Query: 294 FVPIDELG-RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
D++ N D++G++ +S +I+ N + + V + R TV
Sbjct: 122 LTSYDKIDPDGSNARNFHDVLGIITEIS---AIKPVGNAHIPSSYNRHVLIKNLRGSTVK 178
Query: 353 LWNELA 358
W L+
Sbjct: 179 WWRSLS 184
>gi|391336060|ref|XP_003742401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 271
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 24 DIPEIVVQVLDLKLTGN-RYMFNASDGKKRLKAILPSNLSSEVISGNIQNKGLIRLLDYA 82
++ E ++QV+DLK + R DG ++ + S+ + I ++ LI++ ++
Sbjct: 22 EVKEPILQVVDLKPVKDCRLRAYLWDGVEQFNYGMISSQAIPPIQDKLKPNCLIKVKTFS 81
Query: 83 LNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQEDEVKKDGPGIVLKP 142
L TK +I+ +CEVV+ A ++ DE + KP + + + +
Sbjct: 82 LTI--TKDRPIIILMECEVVALAEDV-------GDE---LLKPTESQKRENSNSSQSNQS 129
Query: 143 KQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY 202
V + +Q +P++R+ +T P+++LNP+Q TI+ RVTSKG+++T+
Sbjct: 130 TPAKVPRVLSQ--------GSPSSRMNIT----PIIALNPFQSRCTIRGRVTSKGDIKTW 177
Query: 203 K 203
+
Sbjct: 178 E 178
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 23/122 (18%)
Query: 288 PQTKFNFVPIDEL----------GRYVNGTEL------VDIIGVVQNVSPTMSIRRKSNN 331
P ++ N PI L GR + ++ +D+ G+++ V +I RKS+
Sbjct: 143 PSSRMNITPIIALNPFQSRCTIRGRVTSKGDIKTWEKIIDVCGILKGVGDIQTINRKSDG 202
Query: 332 EMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQ-GISL 390
+ KR+ + D + + V+++LWN+ + + D D P+V I ++ F G+S+
Sbjct: 203 KPFTKREAFIVDTSNKVVSLTLWNDAISKI-----DRTDH-PVVLISKARISTFNGGLSI 256
Query: 391 ST 392
+T
Sbjct: 257 AT 258
>gi|321456442|gb|EFX67550.1| hypothetical protein DAPPUDRAFT_330970 [Daphnia pulex]
Length = 200
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 277 VEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPK 336
V E E A P FNFVP D+L N + +VD+IG+V ++ + +
Sbjct: 38 VGEVTEEAAEKPTITFNFVPFDQLPNQENDS-IVDVIGLVLHLQEKVLV----------- 85
Query: 337 RDITVADETKRT-VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD-FQGISLSTLG 394
ETK T ++ SL E V LL+ IVA+ +K+ + F L TL
Sbjct: 86 -------ETKTTKISRSLTAEF---VDSSLLEKVADKCIVALPGVKISNKFGRRYLETLS 135
Query: 395 RSTVLVSPDLPEAKKLKSW 413
+ V ++ D+ E ++L+ W
Sbjct: 136 STVVQINADMTEVRELREW 154
>gi|324515631|gb|ADY46264.1| Replication factor A 73 kDa subunit [Ascaris suum]
Length = 124
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 496 LGSGYWCEGCQKNDEECSLRYIMV--ARVCDGSGEAWISIFNEEAERIIGCSADELNE-L 552
+ + Y CE C + S +Y+++ + D SG W+++F E+A +++G +A EL + L
Sbjct: 1 MDNQYRCEKCNLTLD--SFKYVLLLSMELSDFSGSHWVTVFEEKATKLLGKTAAELGDLL 58
Query: 553 KSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAESKFLLE 612
+S D+ Y V + + R+ + YN+ +R + +V + VD+ +E
Sbjct: 59 ESNRLDE--YNDVFSAVRFREYTFRIRAKSEFYNDTERIKWSVFELNNVDYDK----YVE 112
Query: 613 EISKKVS 619
E++K V+
Sbjct: 113 ELTKAVT 119
>gi|357459283|ref|XP_003599922.1| hypothetical protein MTR_3g048980 [Medicago truncatula]
gi|355488970|gb|AES70173.1| hypothetical protein MTR_3g048980 [Medicago truncatula]
Length = 486
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 22/249 (8%)
Query: 212 FNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNL 271
N+ L D G +I AT+ + +F + G Y + + + +K + +++ +
Sbjct: 42 MNMLLVDAKGGRIHATVRKDLVARFRSMVEEGATYELHNAIVGINEGPYKITSHKHKLGM 101
Query: 272 NENSEVEEAVNETAFIPQTKFNFVPIDE-LGRYVNGTELVDIIGVV---QNVSPTMSIRR 327
NS + + +P F F+ +E L V T D+IG V +V T + R
Sbjct: 102 LHNSSFTK--KDLPTLPINVFEFMSFNEILSSNVEETS-ADVIGHVIERGDVKETENEGR 158
Query: 328 KSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAI----KSLKVG 383
KS D+T+ D + SLW E A + +++ + SP+V I K+ K
Sbjct: 159 KSK-----VIDLTLQDLENNRLHCSLWGEHADKIVSFFVNHDNSSPVVLILQFCKTHKYL 213
Query: 384 DFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYS 443
GI + G +L + DLPE + Y + K TS+ + + ++ N + S+
Sbjct: 214 GAMGIVNAFYGTKLIL-NGDLPEV----ATYIARMKKTSL-QLTQSVSQISINSSASLSD 267
Query: 444 DRVSLTHIT 452
D ++ +T
Sbjct: 268 DLLNTKRMT 276
>gi|297790616|ref|XP_002863193.1| hypothetical protein ARALYDRAFT_359069 [Arabidopsis lyrata subsp.
lyrata]
gi|297309027|gb|EFH39452.1| hypothetical protein ARALYDRAFT_359069 [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 22/240 (9%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAR 234
+PL LNP W I+ +V + ++ +V L D+ G +I + E
Sbjct: 4 YPLSKLNPDTSEWRIRAKVLA-----IWQEYYDHYSTVDVVLVDDKGGKIHGIIPMELMP 58
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+F R + I+ LR K V + +E+ + + ++F
Sbjct: 59 QFSSRIVENRWIVITDFILRPVVDALKPVAHRFELERSGDG---------------FYDF 103
Query: 295 VPIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSL 353
V + V+ T + VDIIG NVS S + V + D ++R + L
Sbjct: 104 VDFGRILNVVHDTSICVDIIGKAINVSKITSFGCHVYEDQVEHIVFDLQDTSERVLRCVL 163
Query: 354 WNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGR-STVLVSPDLPEAKKLKS 412
A + + + + I ++ ++V +G+ + + R S +L++P +P KK+KS
Sbjct: 164 SITDALPLYRLWMTDPSDVIICVLRFVRVEFREGMWICSGVRCSKLLLNPSIPGVKKMKS 223
>gi|357516565|ref|XP_003628571.1| Fgenesh protein [Medicago truncatula]
gi|355522593|gb|AET03047.1| Fgenesh protein [Medicago truncatula]
Length = 725
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 147/366 (40%), Gaps = 23/366 (6%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMR-TYKNARGEGCVFNVELTDEDGTQIQATMFNEAARK 235
LV+L+P + N +I VRV ++ T R + L D +G ++ AT+ K
Sbjct: 191 LVALDPDKTNCSIMVRVLRLWDVESTLMPGRVNSS--ELLLMDIEGYRMHATVPPFCVEK 248
Query: 236 FYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFV 295
F +VY I+ ++ +F + + Y + ++++++ + IP+ + + +
Sbjct: 249 FRHMLVENRVYIITMFSVLPNLDEFMSTSSAYRIVFHQDTDL--MATTCSAIPECRLSLI 306
Query: 296 PIDELGRYVNGTEL-VDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLW 354
+L + G VD+IG++ + + ++ V K ++T DE RT
Sbjct: 307 TSADLLKKTRGCSYAVDVIGLLTAMHHEYFLDSTNHLSSVLKFELT--DE--RTKFECAL 362
Query: 355 NELATNVGQELLDNAD-KSPIVAIKSLKVGDFQGISLSTLGRSTVLVS--PDLPEAKKLK 411
+ ELL + PIV I+ +V G + + VS P +PE + +
Sbjct: 363 TGKYIGIFHELLKKVQLRLPIVVIQFARVIAENGTPVVCAEKDITKVSFNPTIPEVTQFQ 422
Query: 412 SWYESEGKGTSMASIGSGLG-SLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAY 470
G +S+ S+ + + S + S+ + P G FF + A
Sbjct: 423 DRLLIAGPKSSIVKFNPNFRMSVDVSLSFSKMYPKKSIKELLVPPEGG-----FFVVCAR 477
Query: 471 IS-LIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
++ K DQ W+ CN + + G Y C+ C + + ++ V D G A
Sbjct: 478 VAGFRKVDQ--WFYPVCDCNSFMGNEFGF-YLCDVCHRTSFNVTPKFRFELSVEDDGGVA 534
Query: 530 WISIFN 535
I +
Sbjct: 535 IFHILD 540
>gi|322796628|gb|EFZ19099.1| hypothetical protein SINV_11668 [Solenopsis invicta]
Length = 96
Score = 45.4 bits (106), Expect = 0.082, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 505 CQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQM 564
C++ D+ + Y +V + D + WI+ F+ EAE+IIG SA EL EL + ++ Y+
Sbjct: 31 CKQCDKYPNFTYRLVIELADEAASCWITAFDREAEKIIGMSARELRELSEK--NNIVYEQ 88
Query: 565 KLKE 568
K+ E
Sbjct: 89 KMDE 92
>gi|297818692|ref|XP_002877229.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323067|gb|EFH53488.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 482 YRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERI 541
Y+ K N+ V +WC C+++ + RY++ V D +G+ IF++ A+ I
Sbjct: 176 YKIPKVENEIVKKRKKEMFWCPTCKEDTPKVIPRYLLNVGVMDSTGDTKCLIFDKSAQEI 235
Query: 542 IGCSADELNELK 553
IG SA++L E K
Sbjct: 236 IGVSAEDLLEGK 247
>gi|413921071|gb|AFW61003.1| hypothetical protein ZEAMMB73_705347 [Zea mays]
Length = 183
Score = 45.4 bits (106), Expect = 0.096, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 6/178 (3%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAAR 234
L L P++ + I+V V+ K ++ A G + +V+ L+D +G I A + A
Sbjct: 6 LPDLAPHKIHAKIQVHVSRKW---LFRGATDSGPLQHVDMVLSDREGNAIYAEIPGNLAE 62
Query: 235 KFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNF 294
+ + G VY ISR + A FK V D + ++ V+ A + P +
Sbjct: 63 QKATNIEEGGVYDISRFRVCAAKTVFKIVDGDKMIQFTFHTIVKRATSPPTTFPLYVYRL 122
Query: 295 VPIDELGRYVNGT-ELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
D + +V T VD++GV+ + + +S R I + D K + V
Sbjct: 123 TSFDLIEPHVQTTNNFVDVLGVITEIHELTPVHVRSQLTPTVTRTIIIEDLRKHDLNV 180
>gi|218199238|gb|EEC81665.1| hypothetical protein OsI_25215 [Oryza sativa Indica Group]
gi|222636589|gb|EEE66721.1| hypothetical protein OsJ_23399 [Oryza sativa Japonica Group]
Length = 309
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 457 LGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY 516
L DE+ V F+ A I I WY+AC C K V L G+ C C + + Y
Sbjct: 44 LVDEEDVRFTCDARIKEIDVSSGWWYKACSICRKGVKPTL-QGFECVNCDNTEPIITPSY 102
Query: 517 IMVARVCDGSGEAWISIFNEEAERIIGCSADELNE------------LKSQLGDDNSYQM 564
+ + D + A I +F AE+++ +A +L E L++ +G +Q+
Sbjct: 103 KLNVVIEDNTDRAKIFMFGGMAEQVVRRTAADLVEESSANQLLLPSPLRALIGRRFVFQI 162
Query: 565 KLKEVTW 571
+ E T+
Sbjct: 163 VISEQTF 169
>gi|242013507|ref|XP_002427446.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511832|gb|EEB14708.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 463
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 168 LAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTY--KNARGEGCVFNVELTDEDGTQIQ 225
+A R P+ L+P N I + +K N +T+ K E V+N L D + I
Sbjct: 1 MAAGVRKLPIGGLSPDVTNALIVAVLIAKQNYKTFLSKKDSEERGVWNFTLRDSNIDTIN 60
Query: 226 ATMFNEA--ARKFYDRFQLGKVYYISRGTLRVANKQFKT--------VQNDYEMNLNENS 275
T++ + + Y F G V I R++ KQ T V + ++++L E+S
Sbjct: 61 VTVWGSSFYIQNMYQVFSTGDVVEIINP--RISFKQPDTTNISFNPEVSSPFQLHLQEHS 118
Query: 276 ---------EVE---EAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTM 323
+VE E ++ P+ + G+ + G E +++ ++NV
Sbjct: 119 SNMLIYAEDDVEFYKELIHVPTKAPEDFLRLSDVISYGQAMRG-EYANLLVAIKNVEEIR 177
Query: 324 SIRRKSNNEMVPKRDITVADETKRTVTVSLWNE---LATNVGQELLDNADKSPIVAIKSL 380
+++ K +++ + R I V DET ++LWNE +N Q ++ I+ +
Sbjct: 178 NVKSKRDSKDLTCRHIIVMDETHLEFHMTLWNEEIIFKSNFWQP------RNTIIFFADV 231
Query: 381 KV--GDFQGISLSTLGRSTVLV-SPDLPEAKKLKSW 413
K+ +F+G +T+ TV+ +P EA L+++
Sbjct: 232 KLEWDNFRGTMTATMNSRTVVTENPKTDEALNLRNY 267
>gi|297797966|ref|XP_002866867.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312703|gb|EFH43126.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 20 IASLNPNMDEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 75 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 132 FVSI--LSGIVNPNICVDVVGKIVNV 155
>gi|297822345|ref|XP_002879055.1| hypothetical protein ARALYDRAFT_344448 [Arabidopsis lyrata subsp.
lyrata]
gi|297324894|gb|EFH55314.1| hypothetical protein ARALYDRAFT_344448 [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 108/275 (39%), Gaps = 10/275 (3%)
Query: 164 PAARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQ 223
P + R + + SLNP W+ V++ + + N+ L D GT+
Sbjct: 10 PFDVMTYNRNMFTISSLNPLIHEWSTCVKI-----LHVWHELDDVSNALNLILMDNQGTK 64
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNE 283
I+A + +F G + + +L +T + +++ + ++ VE +N
Sbjct: 65 IRAVIRESLVTRFSPLLIEGLWMILRKFSLIPDVDLVRTTPHRFKIQFSPDTCVE-YLNY 123
Query: 284 TAFIPQTKFNFVPIDELGRYV-NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVA 342
A FNF ++ + N VD++G V NV+ ++ +++ + +
Sbjct: 124 LA-CDYDYFNFARFRDIRMGISNPYICVDLVGKVDNVNDIQLVQMVGSSKDIFVVYFDLI 182
Query: 343 DETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKV--GDFQGISLSTLGRSTVLV 400
D +++ L E A ++ N D I I+ K+ + + +G S ++V
Sbjct: 183 DTEHTRLSIRLTGETAVRFHRQWKVNTDDVVICNIRFAKIVATSNRMWHCTNIGCSKIMV 242
Query: 401 SPDLPEAKKLKSWYESEGKGTSMASIGSGLGSLAK 435
LP +LK W+ G G G L++
Sbjct: 243 DAPLPGVVELKEWWADYCGSPRTGGSGCGDGVLSQ 277
>gi|448407833|ref|ZP_21574028.1| replication factor A [Halosimplex carlsbadense 2-9-1]
gi|445675083|gb|ELZ27618.1| replication factor A [Halosimplex carlsbadense 2-9-1]
Length = 493
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
+L Q + ++ V ++RT+ G EG V N+ L DE G +++ TM+++ A +
Sbjct: 167 ALTMGQSDVNVRGIVLETDSIRTFDRDDGSEGKVSNLLLGDETG-RVRVTMWDDRADRAT 225
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
G I G +R + D E+++ ++ ++E F P+
Sbjct: 226 -ELDPGTAVEIVDGYVR-------EREGDLELHVGDHGAIDEIDETVEFTPEA------- 270
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
D +G V ++VD+ GVV++ P + R +E R+I V D+T + V+LW E
Sbjct: 271 DAIG-AVEMDQVVDLAGVVRSADPKRTFDRDDGSEG-QVRNIRVQDDTD-DIRVALWGEK 327
Query: 358 A 358
A
Sbjct: 328 A 328
>gi|4263834|gb|AAD15477.1| putative replication protein A1 [Arabidopsis thaliana]
Length = 527
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 224 IQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVE--EAV 281
+ A + E KF + +G+ +I L A+ QF+ + Y+M + ++V +V
Sbjct: 1 MHAIVKKELVSKFVHKLLVGEWVFIEIFGLTYASGQFRPTNHLYKMAFHVRTKVMGCASV 60
Query: 282 NETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITV 341
+++ F+ F+ + EL ++ LVD IG + V + ++NN+ K D +
Sbjct: 61 SDSNFLTLAPFSKIQSGELNPHM----LVDAIGQIITVGELEEL--EANNKPTTKIDFEI 114
Query: 342 ADETKRTVTVSLWNELATNVGQELLDNADKSPIV----AIKSLKVGDFQGISLS-TLGRS 396
D+ + V+LW A V + ++ K+ V +K L QGI L L R
Sbjct: 115 RDQMDERMQVTLWGTYAQQVYRACQESEGKNSHVLRWLQLKGLTTVSTQGIPLKICLARL 174
Query: 397 TVLVS 401
VL +
Sbjct: 175 RVLCT 179
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 23/85 (27%)
Query: 471 ISLIKPDQAMWYRACKTCNKKVTDALGSG------------YWCEGCQKNDEECSLRYIM 518
I I D A +Y CKTCNKKV + + +G +WCE C+
Sbjct: 180 IYAIDTDWAWYYINCKTCNKKV-NHIHAGVNGVNNKGKKPRFWCETCKS----------F 228
Query: 519 VARVCDGSGEAWISIFNEEAERIIG 543
V V +GEA + +F+ IIG
Sbjct: 229 VTNVVSSTGEAKLLLFDSICSEIIG 253
>gi|9279564|dbj|BAB01022.1| replication protein A1-like [Arabidopsis thaliana]
Length = 452
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 90/217 (41%), Gaps = 24/217 (11%)
Query: 349 VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG---DFQGISLSTLGRSTVLVSPDLP 405
+ +LW + A V Q ++ D + I+ K+ D + +S ++ S V V L
Sbjct: 111 LACTLWGKYAEIVDQACQESTDGIVVCLIRFAKINLYNDTRSVS-NSFDVSQVFVDHTLA 169
Query: 406 EAKKLKSWYESEGKGTSMASIGSGLGSL--AKNGARSMYSDRVSLTHITSNPSLGDEKPV 463
E K ++G ++ S GS L + G R ++ + + +G K V
Sbjct: 170 ELGLFKQSIPTDG--LTLGSSGSFHKRLYAPRTGDDDGDYPRQTIKEVLTFSDVGKCKTV 227
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVT--DALG---------SGYWCEGCQKNDEEC 512
+S I D +Y C+ NKKV +A+ +WCE C +
Sbjct: 228 -----CTVSAIDTDWPWYYFCCRAHNKKVVKEEAIKFEDVKLPQKPRFWCEICNGFAKSV 282
Query: 513 SLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
++ + + D +GEA +F+ A+ I+G +A +L
Sbjct: 283 VPKFWLHLHIMDQTGEAKCMLFDSHAKEILGITAHDL 319
>gi|414587964|tpg|DAA38535.1| TPA: hypothetical protein ZEAMMB73_990141, partial [Zea mays]
Length = 314
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 21/210 (10%)
Query: 348 TVTVSLWNELATNVG-QELLDNADKSPIVAIK-SLKVGDFQGIS-LSTLGRSTVLVSPDL 404
++ ++LW A+N ++ + + PIV + F+G LS S+ +P +
Sbjct: 2 SLKITLWGNQASNFSISDVYNQSSNQPIVILLVGFLAKRFKGQPYLSGTTASSWYFNPGI 61
Query: 405 PEAKKLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVF 464
PEA+ Y S + + I S +L H T L D P
Sbjct: 62 PEAQT----YYSRLQNNDLQLIQPTAAE-----EEIQVSQPPNLEHKTVE-ELLDIDPDM 111
Query: 465 FSIKAY-----ISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMV 519
F + Y IS I + WY +C C+K + +GY C C D + RY +
Sbjct: 112 FPPEGYRCTVTISRIVQNSKWWYPSCSRCHKSSSQT-STGYHCTSCGCTD--INFRYKLS 168
Query: 520 ARVCDGSGEAWISIFNEEAERIIGCSADEL 549
DG+ EA F+ A +I+G D L
Sbjct: 169 FIATDGTCEAEFFCFDSIARKIVGKPCDNL 198
>gi|302823886|ref|XP_002993591.1| hypothetical protein SELMODRAFT_431648 [Selaginella moellendorffii]
gi|300138603|gb|EFJ05366.1| hypothetical protein SELMODRAFT_431648 [Selaginella moellendorffii]
Length = 160
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 433 LAKNGARSMYSDRVSLTHITSNPSLG--DEKPVFFSIKAYISLIKPDQAMWYRAC----- 485
L+ + +R S +L+ I SN L + P++ I A + +K D+ +Y AC
Sbjct: 23 LSTSSSRQTVSCTTTLSEI-SNMQLKVLESSPIYRVI-ATVKEMKTDE-FYYNACINVVN 79
Query: 486 -KTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGC 544
+ C KK T G++C C +Y + + D S W F E + I+G
Sbjct: 80 ARQCGKKTTRT-ADGWFCNYCNFESANMEFKYALKMCIEDSSSHVWAIAFQEATQEIVGM 138
Query: 545 SADELNELKSQLGDDN 560
SA EL + +L N
Sbjct: 139 SAKELATIYMELAKTN 154
>gi|357515765|ref|XP_003628171.1| hypothetical protein MTR_8g045100 [Medicago truncatula]
gi|355522193|gb|AET02647.1| hypothetical protein MTR_8g045100 [Medicago truncatula]
Length = 80
Score = 44.7 bits (104), Expect = 0.14, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 412 SWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSN 454
SWY+SEG SM+++ S +KNG +S+YSD V +++ITSN
Sbjct: 4 SWYDSEGSDASMSALRSDSIPSSKNGIKSVYSDCVQVSYITSN 46
>gi|452206223|ref|YP_007486345.1| replication protein A [Natronomonas moolapensis 8.8.11]
gi|452082323|emb|CCQ35577.1| replication protein A [Natronomonas moolapensis 8.8.11]
Length = 471
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 179 SLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFY 237
SL+ Q + + V ++RT+ G EG V N+ L DE G +++ T+++E A
Sbjct: 167 SLSMGQSDVNFRGVVLDTDSVRTFDRDDGTEGRVSNLTLGDETG-RVRVTLWDERA-DAA 224
Query: 238 DRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPI 297
+ G+ ++ V + + + E+++ SE+ E F+P + I
Sbjct: 225 EELAAGE-------SVEVVDGYVREREGSLELHVGSRSEINELDEAVEFVPDAT-DIADI 276
Query: 298 DELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNEL 357
E+G+ V DI GVV++ PT + R +E R++ V D T + V+LW E
Sbjct: 277 -EIGQTV------DIAGVVRSADPTRTFDRDDGSEG-QVRNVRVQD-TTDDIRVALWGEK 327
Query: 358 A 358
A
Sbjct: 328 A 328
>gi|47848149|dbj|BAD21930.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47848244|dbj|BAD22069.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125582110|gb|EAZ23041.1| hypothetical protein OsJ_06736 [Oryza sativa Japonica Group]
Length = 306
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 29/249 (11%)
Query: 173 RVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEA 232
R H + + + W ++VRV KG+++ +N G+ + + L DE GT+++A +++
Sbjct: 42 RFHEIQMDHIHWKWWIVRVRVIKKGHLQ--ENYYGDLQI-RLILIDELGTKMEAIVYHRQ 98
Query: 233 ARKFYDRFQLGKVY-YISRG---TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIP 288
A F + G VY + + G T + + +FK +++ + M LN + +
Sbjct: 99 AEHFNQLLRCGSVYDFYNVGFDPTEMIVHLRFK-IRSHFCMILNSATTTRTPHGHVHML- 156
Query: 289 QTKFNFVPIDE--LGRYVNGTELVDIIGVVQNVSP----TMSIRRKSNNEMVPKRDITVA 342
+ + F D+ L R+ LVD+IG+V +V ++ +RR R I +
Sbjct: 157 RCPWRFPEYDDIFLARH---NSLVDVIGLVVHVVDIEFRSLYLRR--------TRIIALV 205
Query: 343 DETKRTVTVSLWN-ELATNVGQELLDNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVS 401
+ + + V +W+ +L N+ + VA +L D + LST S ++ +
Sbjct: 206 NPRLQIIFVRVWDQQLTRNLTRWRSPRTHFDCFVA--TLTRVDRRADELSTTYESDIIFN 263
Query: 402 PDLPEAKKL 410
PD A +
Sbjct: 264 PDSASANEF 272
>gi|328865103|gb|EGG13489.1| hypothetical protein DFA_11250 [Dictyostelium fasciculatum]
Length = 520
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 272 NENSEVEEAVNETAFI----PQ--------TKFNFVPIDELGRYVNGTE-------LVDI 312
N NS+ + +++TA + PQ TKFNF+ ID+LG E LVD+
Sbjct: 232 NNNSKFQLVIDKTAKVLEVPPQQRLHQDAWTKFNFINIDQLGPTAIPIETVNRDSILVDV 291
Query: 313 IGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKS 372
IG + ++S SI + N +VP + + D + ++ ++ W E A + Q+L
Sbjct: 292 IGKILSISDISSIELR-NGGIVPTLLVNIFDTSNTSIDITFWGEHALSCQQQL----KVG 346
Query: 373 PIVAIKSLKVGDFQGISLSTLGRSTVLVSP-DLPEAKKLKSWYESEGKGTSMASIGSGLG 431
I+ + +K+ ++ G SLS S + ++P + P+ ++L ++ S L
Sbjct: 347 DIITLYQVKLTNYSGRSLS-FATSRLDINPSNFPQYQQLLAFINHPTTIESKILEPKNLS 405
Query: 432 SLAKNGARSMYSDRVSLTHITSNPSLGDEK 461
S M+ ++ ++ SNP+ D K
Sbjct: 406 SNKSPDKADMHPP-ITAKYLLSNPNFEDYK 434
>gi|402218383|gb|EJT98460.1| hypothetical protein DACRYDRAFT_110902 [Dacryopinax sp. DJM-731
SS1]
Length = 314
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 32/300 (10%)
Query: 308 ELVDIIGVVQNVSPTMSIR------RKSNNEMVPKR---DITVADETKRTVTVSLWNELA 358
ELVDI+ ++ + + R ++ +P + V D++ + + LW+ A
Sbjct: 9 ELVDIMVIINRMGRLIKSRVLAGAKATKGHQSIPSSTCCKLWVMDDSLTCMHIVLWDHAA 68
Query: 359 TNVGQELLDNADKSPIVAIKSLKVGDFQGISLST-LGRSTVLVSPDLPEAKKLKSWYESE 417
+ NA ++ +KS VG L T + + VL + + L WY +
Sbjct: 69 H------IFNAAPGCMLVLKSAAVGYLNSPCLKTDVVHTKVLTKYNNVATQVLLFWYHHQ 122
Query: 418 GKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITS---NPSLGDEKPVFFSIKAYISLI 474
G +G+ + +G + +V TH+ +LG F ++A I L
Sbjct: 123 -NGKEKEKWWMIMGTYSSDGHADHWYIKVMETHMIKWAMEKNLGKLSCTTFLVEANILLG 181
Query: 475 KPDQAMWYRAC--KTCNK----KVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGE 528
+ + C K+CNK + GS Y C+ C N +Y + + DG+ E
Sbjct: 182 TMHKDYIHMGCPFKSCNKIPKPDWRNVDGS-YSCQQCGANVLMLGPKYHLNFKAMDGTKE 240
Query: 529 AWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNE 588
W +FN + +IG A + + D +Y+ K+ + H R++V + E
Sbjct: 241 CWCHVFNSASACLIGVDAGTMLVWRES---DQTYERKISKPN--MHKWRMTVVAEHAKAE 295
>gi|448282722|ref|ZP_21474006.1| replication factor A [Natrialba magadii ATCC 43099]
gi|445575686|gb|ELY30154.1| replication factor A [Natrialba magadii ATCC 43099]
Length = 487
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAA 233
H + SL+ N + V G +RT+ G EG V N+ L D G +++ T+++E A
Sbjct: 162 HTVESLSLGLSNVNLVGLVLDTGTVRTFDRDDGSEGKVSNLVLGDSSG-RVRVTLWDEQA 220
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ-TKF 292
+ G T+ V + K E+++ VEE E ++P+ T
Sbjct: 221 -DLATEIEAGT-------TVEVVDGYVKERDGSLELHVGNRGAVEEVDAEVEYVPESTSI 272
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I G E VD+ GVV++ P + R +E R+I V D T + V+
Sbjct: 273 ESIEI--------GQE-VDLAGVVRSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVA 321
Query: 353 LWNELA 358
LW E A
Sbjct: 322 LWGEKA 327
>gi|289581867|ref|YP_003480333.1| OB-fold tRNA/helicase-type nucleic acid binding protein [Natrialba
magadii ATCC 43099]
gi|289531420|gb|ADD05771.1| nucleic acid binding OB-fold tRNA/helicase-type [Natrialba magadii
ATCC 43099]
Length = 492
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAA 233
H + SL+ N + V G +RT+ G EG V N+ L D G +++ T+++E A
Sbjct: 167 HTVESLSLGLSNVNLVGLVLDTGTVRTFDRDDGSEGKVSNLVLGDSSG-RVRVTLWDEQA 225
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ-TKF 292
+ G T+ V + K E+++ VEE E ++P+ T
Sbjct: 226 -DLATEIEAGT-------TVEVVDGYVKERDGSLELHVGNRGAVEEVDAEVEYVPESTSI 277
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I G E VD+ GVV++ P + R +E R+I V D T + V+
Sbjct: 278 ESIEI--------GQE-VDLAGVVRSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVA 326
Query: 353 LWNELA 358
LW E A
Sbjct: 327 LWGEKA 332
>gi|222635617|gb|EEE65749.1| hypothetical protein OsJ_21411 [Oryza sativa Japonica Group]
Length = 488
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 233 ARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ-NDYEMNLNENSEVEEAVNETAFIPQTK 291
A++F G VY IS A ++ Q +Y + ++ ++ + IP+
Sbjct: 60 AKQFRPLLNKGSVYLISNTVAIDAKRKTNIYQCQNYILQFKHDTRIQPLESRGLTIPKFF 119
Query: 292 FNFVPIDE-LGRYVNGTELVDIIGVVQNVSP 321
F+F P DE LG+ ++ L+D+IGV+ + P
Sbjct: 120 FDFCPFDEVLGKNISSKPLIDLIGVISYIGP 150
>gi|389851474|ref|YP_006353708.1| replication factor A complex, RPA41 subunit [Pyrococcus sp. ST04]
gi|388248780|gb|AFK21633.1| putative replication factor A complex, RPA41 subunit [Pyrococcus
sp. ST04]
Length = 351
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY-IMVARV 522
F ++ I+ K + + Y AC C KKV G G W C ++ E ++ I+ +
Sbjct: 192 FVEVRGTIA--KVYRVLVYDACPECKKKVDYDPGMGVWI--CPEHGEVEPIKITILDFGL 247
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKE 568
DG+G +++F ++AE ++G S +E++E ++ + S M +KE
Sbjct: 248 DDGTGYIRVTLFGDDAEELLGVSPNEISE---KIREMESMGMSMKE 290
>gi|297791779|ref|XP_002863774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309609|gb|EFH40033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 267
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +R G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRVTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 71 LSRLIIDEWVSIKNFDVSRVNSILRPVPHRFKIVFRSDTLV-QSINMCS--SRTYFNLTE 127
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 128 FVSI--LSGIVNPNICVDVVGKIVNV 151
>gi|448396828|ref|ZP_21569276.1| replication factor A [Haloterrigena limicola JCM 13563]
gi|445673357|gb|ELZ25918.1| replication factor A [Haloterrigena limicola JCM 13563]
Length = 482
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 198 NMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
++RT+ G EG V N+ L D G +++ T+++E A + + G + G ++
Sbjct: 185 SVRTFDRDDGSEGKVSNLVLGDSTG-RVRVTLWDEQADRAT-ELEAGATVEVIDGYVKER 242
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
+ Q E+++ VEE + ++P++ PI++L + VDI GVV
Sbjct: 243 DGQL-------ELHVGNRGAVEEVDEDVEYVPES----TPIEDL----EIGQTVDIAGVV 287
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA-TNVG 362
++ P + R +E R+I V D T + V+LW E A T++G
Sbjct: 288 RSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVALWGEKADTDIG 332
>gi|328725637|ref|XP_003248557.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 248
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYV 304
VY I G ++ A+K + +N+YE+ N + + E +T IP + ID L
Sbjct: 8 VYNIKNGEVKEADKAYNKSKNNYEIFFNGLTTIIERSGDTD-IPNHQ-QLKTIDNLFSMD 65
Query: 305 NGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQE 364
T +IG ++ + I + K + VTV+LW+ ATN
Sbjct: 66 QNT----LIGNNSDILLSSLIYNYKRIYLSYKIHYYIKIAFFLKVTVTLWDTEATNF--- 118
Query: 365 LLDNADKSPIVAIKSLKVGDFQGIS-LSTLGRSTVLVSPDLPEAKKLKSWY-ESEGK--- 419
NA++ I++I K+ D++ + +S G S + ++P+ E L++WY E E K
Sbjct: 119 ---NANEGDIMSIMEGKIIDYKNVKKISMTGSSKIEINPNWNETLDLQNWYKEFEKKEFL 175
Query: 420 GTSMASIGSGLGSLAKNGARSMYSDRV 446
S SIGS + ++ R + +++
Sbjct: 176 NLSQMSIGSQEHNTSETSQRILQQNKI 202
>gi|391331509|ref|XP_003740187.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 278
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 43/227 (18%)
Query: 192 RVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRG 251
R+ SK ++ + G +FN L+D G I AA + Y++ L K+ I+
Sbjct: 80 RIKSKTPIKVWTKGTDTGKLFNFVLSDMSG-DINVISSGNAAEEIYEKITLSKIVPIAGD 138
Query: 252 TLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVD 311
+L E + +++ A P ++D
Sbjct: 139 ------------------DLPEIQSLTTILSDLATKP-----------------ANSVID 163
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADK 371
I V+ +V P S K+ ITV D++ R + V +W+E VG+ D+ +
Sbjct: 164 IRVVIFDVGPPQSFTCHDGTSR-QKQIITVLDKSMRMINVGVWSEF---VGK--FDDKEG 217
Query: 372 SPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
++ ++L++ D++G+ + +T+L + E ++L++W+E+ G
Sbjct: 218 QAVIN-RNLQIRDYKGVRQLSSTSNTMLAAITDTETRELQTWFETTG 263
>gi|391334312|ref|XP_003741549.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 232
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 207 GEGCVF-NVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQN 265
G G VF N L+D G +I ++ + + +G+ Y I+ ++ N Q++ ++
Sbjct: 15 GLGTVFPNFVLSDTSG-EINLIASRDSTEEIFGMITVGQGYKINAFKVKAVNPQYRATEH 73
Query: 266 DYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSP-TMS 324
+ E+ L + S++ +P+T+ + EL T + ++ V P T +
Sbjct: 74 ECELQLTKLSKLVPITGND--LPKTQAQTTLLIELLSKPVNTTVDVLVVVFDVRPPQTFN 131
Query: 325 IRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD 384
R N E K+ +TV D+ + V + +W+E VG+ LD + ++ +K+L V D
Sbjct: 132 CRDGINRE---KQTVTVLDDCMKMVNLGIWSEF---VGK--LDGKEGDAVI-LKNLHVRD 182
Query: 385 FQGISLSTLGRSTVLVSPDL-PEAKKLKSWYESEG 418
+ G + +T++ EA++L+ W++++G
Sbjct: 183 YNGTRQPSTTTNTIIREAGRDAEAERLQKWFKTDG 217
>gi|321463989|gb|EFX75000.1| hypothetical protein DAPPUDRAFT_250980 [Daphnia pulex]
Length = 154
Score = 44.3 bits (103), Expect = 0.20, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 36/149 (24%)
Query: 287 IPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETK 346
IP K +F +D+ +++++IG + + ++I+ + KR+I + D++
Sbjct: 24 IPFYKHHFTALDKCQE---SGKIIEVIGGLYEIGEIITIKTAKAST---KREIKIIDQSY 77
Query: 347 RT-----VTVSLWNELATNVGQELLDNADKSPIVAIKSLKVG-DFQGISLSTLGR----- 395
VT+++WN +A I+A++ L+V F GI +ST R
Sbjct: 78 NKPICLQVTITMWNTIAEKF------------IIAVEKLEVVVAFAGIKISTFSREDGEI 125
Query: 396 -------STVLVSPDLPEAKKLKSWYESE 417
+ V ++PD+PE+ +LK W + +
Sbjct: 126 FLDSFHDTLVSINPDIPESAELKRWLKQQ 154
>gi|297795105|ref|XP_002865437.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311272|gb|EFH41696.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG G N+ L DE TQIQA + +E +
Sbjct: 16 IASLNPNMGEWSVSVKI-----LNCWSVSRGTGRELNMILGDEHFTQIQAVVRDELIDNY 70
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
R + + LR +FK V + + +++N + +T FN
Sbjct: 71 LSRLIIDEWV---NSILRPVPHRFKIVF--------RSDTLVQSINMCS--SRTHFNLTE 117
Query: 294 FVPIDELGRYVNGTELVDIIGVVQNV 319
FV I L VN VD++G + NV
Sbjct: 118 FVSI--LSGIVNPNICVDVVGKIVNV 141
>gi|254675140|ref|NP_083473.1| meiosis-specific with OB domain-containing protein [Mus musculus]
gi|341940521|sp|Q9D513.3|MEIOB_MOUSE RecName: Full=Meiosis-specific with OB domain-containing protein;
AltName: Full=Protein expressed in male leptotene and
zygotene spermatocytes 675; Short=MLZ-675
Length = 470
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 23/279 (8%)
Query: 301 GRYVNGTELVDIIGVVQNVSP----TMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNE 356
G ++G +++++ V++V T S RRK + ++ + DET+ + T++ W+
Sbjct: 160 GHSLDG-RIINVLAAVRSVGEPKYFTTSDRRKGQ-----RCEVKLFDETEPSFTMTCWDN 213
Query: 357 LATNVGQELLDNADKSPIVAIK-SLKVGDFQGISLST-LGRSTVLVSPDLPEAKKLKSWY 414
+ + Q + A ++ I A + FQ +T + ++ + V+PD PEA L + Y
Sbjct: 214 ESILLAQSWM--ARETVIFASDVRINFNKFQNCMAATVISKTIITVNPDTPEANILLN-Y 270
Query: 415 ESEGKGTSMAS-IGSGLG-SLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYIS 472
E K T++A I S L S+ N +Y+ V + + S G P + + AYIS
Sbjct: 271 IRENKETNVADEIDSYLKESVNLNTIVDVYT--VEQLKVKALKSEGKADPFYGILYAYIS 328
Query: 473 LIKPDQ---AMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEA 529
+ D + C +C V +A + C + L + ++ + D +G
Sbjct: 329 TLNIDDETTKVVRNRCSSCGYIVNEASNTCTICNQDSSRLKSFFLSFDVLVDLTDHTGTL 388
Query: 530 W-ISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLK 567
S+ AE +GC+ +E + S+ +Q+ L+
Sbjct: 389 HSCSLSGSIAEETLGCTINEFLTMTSEQKTKLKWQLLLE 427
>gi|71661367|ref|XP_817706.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882913|gb|EAN95855.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 624
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 14/182 (7%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEG-CVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
++ + +R+ KG R + G VF+ D +G + + ++ YD F LG
Sbjct: 227 DYALDLRIIWKGKQRHLTASGSMGRFVFDCIGVDRNGDAVSISCTGQSG--LYDIFSLGD 284
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIPQTKFNFVPIDEL 300
++ L ++ ++ + LNE S V EEAV+ P F + L
Sbjct: 285 CVCVTNACLTSRSE----AEDTMRLQLNERSFVVLRGEEAVSNIPTHPCRMFGARSVTNL 340
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT-VTVSLWNELAT 359
Y N ++V + GVV +VS + + V + I++ D + + V+LW E +
Sbjct: 341 INYSNVGDIVHVEGVVTSVSSAALVNTRRGR--VERSGISLQDPASSSLIDVTLWEEFSR 398
Query: 360 NV 361
+V
Sbjct: 399 SV 400
>gi|440290231|gb|ELP83657.1| hypothetical protein EIN_467110 [Entamoeba invadens IP1]
Length = 225
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 172 RRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNE 231
R++ P + N TIK RV SK N+ + G F L D + ++ ++
Sbjct: 138 RKITPFAVITTMTNNVTIKGRVISKSNI----TKKVTGTKFCFLLQDANENEMTVNCYDN 193
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMN 270
+ +DRFQ+G VY+I +QFK ++ Y N
Sbjct: 194 ECEEAFDRFQVGSVYFI-------YCRQFKEKKDWYTFN 225
>gi|407851114|gb|EKG05230.1| hypothetical protein TCSYLVIO_003701 [Trypanosoma cruzi]
Length = 534
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 14/182 (7%)
Query: 186 NWTIKVRVTSKGNMRTYKNARGEG-CVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGK 244
++ + +R+ KG R + G VF+ D +G + + ++ YD F LG
Sbjct: 176 DYAMDLRIIWKGKQRHLTASGSMGRFVFDCIGVDRNGDAVSISCTGQSG--LYDIFSLGD 233
Query: 245 VYYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIPQTKFNFVPIDEL 300
++ L ++ ++ + LNE S V EEAV+ P F + L
Sbjct: 234 CVCVTNACLTSRSE----AEDTMRLQLNERSFVVLRGEEAVSNIPTHPCRMFGARSVTNL 289
Query: 301 GRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT-VTVSLWNELAT 359
Y N ++V + GVV +VS + + V + I++ D + + V+LW E +
Sbjct: 290 INYSNVGDIVHVEGVVTSVSSATLVNTRRGR--VERSGISLQDPASSSLIDVTLWEEFSR 347
Query: 360 NV 361
+V
Sbjct: 348 SV 349
>gi|448307001|ref|ZP_21496902.1| replication factor A [Natronorubrum bangense JCM 10635]
gi|445596548|gb|ELY50633.1| replication factor A [Natronorubrum bangense JCM 10635]
Length = 483
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAA 233
H + +L+ N + V G++RT+ G EG V N+ L D G +++ T+++E A
Sbjct: 162 HTVEALSLGLSNVNLVGLVLDTGSVRTFDRDDGSEGKVSNLTLGDSTG-RVRVTLWDEQA 220
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
S T+ V + K E+++ VEE + ++P++
Sbjct: 221 DL--------ATEIESNTTVEVIDGYVKERDGSLELHVGNRGAVEEVDEDVEYVPES--- 269
Query: 294 FVPID--ELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTV 351
PI+ E+G+ VDI GVV++ P + R +E R+I V D T + V
Sbjct: 270 -TPIEAVEIGQT------VDIAGVVRSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRV 320
Query: 352 SLWNELATN 360
+LW E A +
Sbjct: 321 ALWGEKADH 329
>gi|448356409|ref|ZP_21545142.1| replication factor A [Natrialba chahannaoensis JCM 10990]
gi|445653442|gb|ELZ06313.1| replication factor A [Natrialba chahannaoensis JCM 10990]
Length = 490
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 175 HPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAA 233
H + SL+ N + V G +RT+ G EG V N+ L D G +++ T+++E A
Sbjct: 162 HTVESLSLGLSNVNLVGLVLDTGTVRTFDRDDGSEGKVSNLVLGDSTG-RVRVTLWDEQA 220
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQ-TKF 292
+ G T+ V + K E+++ VEE E ++P+ T
Sbjct: 221 -DLATEIETGT-------TVEVVDGYVKERDGSLELHVGNRGAVEEVDAEVEYVPESTSI 272
Query: 293 NFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVS 352
+ I G E VD+ GVV++ P + R +E R+I V D T + V+
Sbjct: 273 ESIEI--------GQE-VDLAGVVRSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVA 321
Query: 353 LWNELA 358
LW E A
Sbjct: 322 LWGEKA 327
>gi|170290896|ref|YP_001737712.1| OB-fold tRNA/helicase-type nucleic acid binding protein [Candidatus
Korarchaeum cryptofilum OPF8]
gi|170174976|gb|ACB08029.1| nucleic acid binding OB-fold tRNA/helicase-type [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 553
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 481 WYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAER 540
W+ C C +V+ GS Y C C + L Y+ + + DG+G A + +F AER
Sbjct: 409 WH--CPLCGARVSYEYGS-YSCPNCGPLERAIPLLYLSLT-LDDGTGVARVMVFGRNAER 464
Query: 541 IIGCSADELNELKSQLG--------DDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQR 592
++ S +++ +LG D+ S ++ +EV + + Y +
Sbjct: 465 LLRMSTEDVIRRADELGQPFHSIPTDELSAEILGREV--------IVRGKATYMEGGLVK 516
Query: 593 VTVRAVAPVDFAAESKFLLEEISK 616
V + + PVD+++E L+ EI +
Sbjct: 517 VVLDEIEPVDYSSEVHSLIREIEE 540
>gi|407411706|gb|EKF33655.1| hypothetical protein MOQ_002461 [Trypanosoma cruzi marinkellei]
Length = 569
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 187 WTIKVRVTSKGNMRTYKNARGEG-CVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKV 245
+ + +R+ KG R + + G VF+ D +G + +++ YD F LG
Sbjct: 177 YALDLRIIWKGKQRHFTASGSMGRFVFDCIGVDRNGDAV--SIYCTGQSGLYDIFSLGDC 234
Query: 246 YYISRGTLRVANKQFKTVQNDYEMNLNENSEV----EEAVNETAFIPQTKFNFVPIDELG 301
++ L ++ T++ + LNE S V EEAV+ P F + + +
Sbjct: 235 VCVTNAYLTCRSEAEGTMR----LQLNERSFVVLRGEEAVSNIPTHPCRMFGAISVTNVL 290
Query: 302 RYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRT-VTVSLWNELATN 360
N ++V + GVV +VS + + V + I + D + + V+LW E + +
Sbjct: 291 NCSNVGDIVHVEGVVTSVSSATLVNTRRGR--VERSGILLQDSASSSLIDVTLWEEFSRD 348
Query: 361 V 361
V
Sbjct: 349 V 349
>gi|357124293|ref|XP_003563836.1| PREDICTED: uncharacterized protein LOC100844654 [Brachypodium
distachyon]
Length = 142
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 253 LRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRY-VNGTELVD 311
+++ NK + +Y + +++V + IP+ F F P D+L L D
Sbjct: 1 MKMKNKSYIYHHQNYMLQFKHSTKVHRLESRGTDIPKFSFKFCPFDKLPEMNTLAKPLQD 60
Query: 312 IIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVG-QELLDNAD 370
++GV+ +V P S+N++ R I + + ++T + LW Q + A
Sbjct: 61 VLGVISHVGPFDYASPTSSNKL---RIIKIRNLDEQTQEIRLWGHHGETFDEQTVFRKAQ 117
Query: 371 KSPIVAI-KSLKVGDFQGIS 389
+ +V I + DF G+S
Sbjct: 118 EGIVVGIFAGVTASDFLGMS 137
>gi|336253183|ref|YP_004596290.1| OB-fold tRNA/helicase-type nucleic acid binding protein [Halopiger
xanaduensis SH-6]
gi|335337172|gb|AEH36411.1| nucleic acid binding OB-fold tRNA/helicase-type [Halopiger
xanaduensis SH-6]
Length = 495
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 198 NMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
++RT+ G EG V N+ + DE G +++ T+++E A + G T+ V
Sbjct: 190 SVRTFDRDDGSEGKVSNLAVGDETG-RVRVTLWDEQA-DLATELEPGT-------TVEVV 240
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
+ K + E+++ VEE + ++P++ PI+E V + VD+ GVV
Sbjct: 241 DGYVKERDGNLELHVGNRGTVEEVDEDVEYVPES----TPIEE----VEIGQTVDLAGVV 292
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
++ P + R +E R+I V D T + V+LW E A
Sbjct: 293 RSADPKRTFDRDDGSEG-QVRNIRVQDATD-DIRVALWGEKA 332
>gi|110289352|gb|AAP54489.2| hypothetical protein LOC_Os10g35880 [Oryza sativa Japonica Group]
Length = 1169
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L D++GT I A ++ +F + GKVYY+ +R +++++ V N + +
Sbjct: 377 LIDQEGTSIAAQIYPPCDLQFREIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTRWT 436
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
+VE+ + A P ++ P L + V+ E
Sbjct: 437 KVEQVADPAADFPLYTYSLTPYGGLRQRVDRKE 469
>gi|297838191|ref|XP_002886977.1| hypothetical protein ARALYDRAFT_338786 [Arabidopsis lyrata subsp.
lyrata]
gi|297332818|gb|EFH63236.1| hypothetical protein ARALYDRAFT_338786 [Arabidopsis lyrata subsp.
lyrata]
Length = 272
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 177 LVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 236
+ SLNP G W++ V++ + + +RG N+ L D+ TQIQA + +E +
Sbjct: 20 IASLNPNMGEWSVSVKI-----LNCWSVSRGSDRELNMILGDKHFTQIQAVVRDELIDNY 74
Query: 237 YDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN--- 293
+ R + + I + N + V + +++ ++ V +++N + +T FN
Sbjct: 75 FSRLIVDEWVSIKNFDVSRVNSILRPVPHRFKIVFRLDTLV-QSINMCS--SRTYFNLTE 131
Query: 294 FVPIDELGRYVNGTELVDIIG-VVQNV 319
FV I L VN VD++G VV NV
Sbjct: 132 FVSI--LSSIVNPNICVDVVGKVVINV 156
>gi|297817878|ref|XP_002876822.1| hypothetical protein ARALYDRAFT_322576 [Arabidopsis lyrata subsp.
lyrata]
gi|297322660|gb|EFH53081.1| hypothetical protein ARALYDRAFT_322576 [Arabidopsis lyrata subsp.
lyrata]
Length = 519
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 481 WYRACKTCNKKV-------TDALGSG-YWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
+Y C C KKV T+ + +G Y CE C S RY + A V D +G A
Sbjct: 283 FYIGCTKCFKKVSPYFNPETEEIEAGKYECEKCDTFVTTTSTRYKVQATVIDHTGSASFL 342
Query: 533 IFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQ-EYNNEKRQ 591
+F+++ ++I SA EL E + Q + +L ++ + + ++ + ++N++
Sbjct: 343 LFDQDVIKLIHKSAYELLEQQVQFNRSDQIPQELLDLQGLQFVFKIQGSDSTKFNSQSTF 402
Query: 592 RV 593
RV
Sbjct: 403 RV 404
>gi|357290773|gb|AET73373.1| hypothetical protein EMVG_00087 [Emiliania huxleyi virus PS401]
Length = 215
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 205 ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQ 264
RG G + ++L D GT I+A FN +AR+ + + G + G L+ ++F+ Q
Sbjct: 142 GRGAGVMLCLDLADATGT-IRAVAFNASARRLKTQLRAGDDILVRGGRLKRVEERFRR-Q 199
Query: 265 NDYEMNLNENSEVE 278
+++E+ L+E + V+
Sbjct: 200 HNFELTLDERAVVD 213
>gi|14520503|ref|NP_125978.1| replication factor A [Pyrococcus abyssi GE5]
gi|5457718|emb|CAB49209.1| RPA41 subunit of the hetero-oligomeric complex involved in
homologous recombination [Pyrococcus abyssi GE5]
Length = 375
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY-IMVARV 522
F ++ I+ K + + Y AC C KKV G G W C ++ E ++ I+ +
Sbjct: 216 FVEVRGTIA--KVYRVLTYDACPECKKKVDYDEGLGVWI--CPEHGEVQPIKMTILDFGL 271
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQL 556
DG+G +++F ++AE ++G S +E+ E +L
Sbjct: 272 DDGTGYIRVTLFGDDAEELLGVSPEEIAEKIKEL 305
>gi|391326557|ref|XP_003737779.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Metaseiulus occidentalis]
Length = 131
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 490 KKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSADEL 549
KKV D + CE C + R I+ V D + + W + FNE+AE+I+G +A L
Sbjct: 2 KKVHDQGDGTFSCEKCASSGPNYKWRLILKMAVADPTKQLWCTAFNEKAEQILGVTAATL 61
Query: 550 NELKSQLGD--DNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAES 607
+ D D + + + R+ V + +E+R + V V + + +S
Sbjct: 62 GDYSENNPDEMDRIFSASMFKQFHFKFRGRMEV----FQDERRFQTAVVEVKEIKPSEDS 117
Query: 608 KFLLEEIS 615
+ L+++IS
Sbjct: 118 QHLVKDIS 125
>gi|380741029|tpe|CCE69663.1| TPA: replication factor A [Pyrococcus abyssi GE5]
Length = 358
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY-IMVARV 522
F ++ I+ K + + Y AC C KKV G G W C ++ E ++ I+ +
Sbjct: 199 FVEVRGTIA--KVYRVLTYDACPECKKKVDYDEGLGVWI--CPEHGEVQPIKMTILDFGL 254
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQL 556
DG+G +++F ++AE ++G S +E+ E +L
Sbjct: 255 DDGTGYIRVTLFGDDAEELLGVSPEEIAEKIKEL 288
>gi|14020865|dbj|BAB47563.1| RPA41 [Pyrococcus furiosus]
Length = 360
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY-IMVARV 522
F ++ I+ K + + Y AC C KKV G W C ++ E ++ I+ +
Sbjct: 201 FVELRGTIA--KVYRVLVYDACPECKKKVDYDPGMDVWI--CPEHGEVEPIKITILDFGL 256
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
DGSG I++F ++AE ++G +E+ + +L + S M LKE +A+
Sbjct: 257 DDGSGYIRITLFGDDAEELLGVGPEEIAQ---KLKEMESMGMTLKEAAR-------KLAE 306
Query: 583 QEYNNEKRQRVTVRA 597
+E+ N + + VR
Sbjct: 307 EEFYNIIGKEIIVRG 321
>gi|77552759|gb|ABA95556.1| hypothetical protein LOC_Os11g47400 [Oryza sativa Japonica Group]
Length = 296
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 454 NPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECS 513
NP G ++ VF SI I ++ + WY +C CNK V Y C C K E +
Sbjct: 5 NP--GSQEFVFTSI-VTIDRVQENIQWWYMSCNLCNKIVIQK-NDKYHCRNCNKYPENTT 60
Query: 514 LRYIMVARVCDGSGEAWISIFNEEAERII 542
RY + ++ D + +IF++ A+ ++
Sbjct: 61 PRYRLRLQISDHTTSTSCTIFDDVAQSML 89
>gi|18978392|ref|NP_579749.1| replication factor A [Pyrococcus furiosus DSM 3638]
gi|397652333|ref|YP_006492914.1| replication factor A [Pyrococcus furiosus COM1]
gi|18894230|gb|AAL82144.1| replication factor A related protein [Pyrococcus furiosus DSM 3638]
gi|393189924|gb|AFN04622.1| replication factor A [Pyrococcus furiosus COM1]
Length = 358
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 464 FFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRY-IMVARV 522
F ++ I+ K + + Y AC C KKV G W C ++ E ++ I+ +
Sbjct: 199 FVELRGTIA--KVYRVLVYDACPECKKKVDYDPGMDVWI--CPEHGEVEPIKITILDFGL 254
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQ 582
DGSG I++F ++AE ++G +E+ + +L + S M LKE +A+
Sbjct: 255 DDGSGYIRITLFGDDAEELLGVGPEEIAQ---KLKEMESMGMTLKEAAR-------KLAE 304
Query: 583 QEYNNEKRQRVTVRA 597
+E+ N + + VR
Sbjct: 305 EEFYNIIGKEIIVRG 319
>gi|357511177|ref|XP_003625877.1| hypothetical protein MTR_7g108280 [Medicago truncatula]
gi|355500892|gb|AES82095.1| hypothetical protein MTR_7g108280 [Medicago truncatula]
Length = 384
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F +EL + G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQDYKNKK---LPFFMELVLMNRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + + ++ N+Y+++ N++V+ +++T +P
Sbjct: 62 LIYKFKEQLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVP 296
++F P
Sbjct: 120 YSFTP 124
>gi|115435624|ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group]
gi|113532101|dbj|BAF04484.1| Os01g0244200 [Oryza sativa Japonica Group]
Length = 2498
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L D++GT I A ++ +F + GKVYY+ +R +++++ V N + +
Sbjct: 1706 LIDQEGTSIAAQIYPPCDLQFREIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTRWT 1765
Query: 276 EVEEAVNETAFIPQTKFNFVPIDELGRYVNGTE 308
+VE+ + A P ++ P L + V+ E
Sbjct: 1766 KVEQVADPAADFPLYTYSLTPYGGLRQRVDRKE 1798
>gi|356523267|ref|XP_003530262.1| PREDICTED: uncharacterized protein LOC100805297 [Glycine max]
Length = 231
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 473 LIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWIS 532
++ + ++ Y AC C KK TD + + C C K +++ LRY + V
Sbjct: 60 IVMENHSLCYAACIHCYKK-TDVDTAPFTC-ACGKYNQQVVLRYRLEVMVNHKEECTKFL 117
Query: 533 IFNEEAERIIGCSADELNELKSQLGD 558
+++ E ++IG SADE+N LK GD
Sbjct: 118 LWDHECTKLIGQSADEVNRLKIADGD 143
>gi|242065158|ref|XP_002453868.1| hypothetical protein SORBIDRAFT_04g020125 [Sorghum bicolor]
gi|241933699|gb|EES06844.1| hypothetical protein SORBIDRAFT_04g020125 [Sorghum bicolor]
Length = 1822
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 216 LTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENS 275
L DE+G I A ++ +F + G VY +S +R + K ++ V ND+ +N +
Sbjct: 1508 LIDEEGNCIHAQIYPPDHEQFKPLIKEGSVYNLSYFRVRKSGK-YRPVDNDHMINFTRWT 1566
Query: 276 EVEEAVNETAFIPQTKFNFVPIDEL 300
VEE V P ++ P+++L
Sbjct: 1567 SVEEVVEIPPAFPMYTYSLTPMEQL 1591
>gi|297825699|ref|XP_002880732.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326571|gb|EFH56991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 243
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 474 IKPDQAMWYRACKTCNKK-----------VTDALGSGYWCEGCQKNDEECSLRYIMVARV 522
I D + ++ +C C+K V +WC C+++ + RY++ V
Sbjct: 150 IDTDYSWYFFSCLKCSKTAYKIPKVENEIVKKGKKEMFWCPTCKEDTPKVIPRYLLNVGV 209
Query: 523 CDGSGEAWISIFNEEAERIIGCSADELNELK 553
D +G+ IF++ A+ IIG SA++L E K
Sbjct: 210 MDSTGDTKCLIFDKSAQEIIGVSAEDLLEGK 240
>gi|321459823|gb|EFX70872.1| hypothetical protein DAPPUDRAFT_327745 [Daphnia pulex]
Length = 159
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 45/146 (30%)
Query: 270 NLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSIRRKS 329
LN++ EV E P F FVP D+L + +VD+IG+V ++
Sbjct: 51 TLNDDGEVAEK-------PTITFKFVPFDQLPN-LEDDSIVDVIGLVLHL---------- 92
Query: 330 NNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGD-FQGI 388
EMV V LL+ + IVA+ +K+ + F
Sbjct: 93 -QEMVL-------------------------VKLSLLEKVEDKCIVALSGVKISNKFGRR 126
Query: 389 SLSTLGRSTVLVSPDLPEAKKLKSWY 414
L TL + V V+PD+ EA++L+ WY
Sbjct: 127 YLETLSSTVVQVNPDMSEARELREWY 152
>gi|435845667|ref|YP_007307917.1| single-stranded DNA-binding protein [Natronococcus occultus SP4]
gi|433671935|gb|AGB36127.1| single-stranded DNA-binding protein [Natronococcus occultus SP4]
Length = 496
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 198 NMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
++RT+ G EG V N+ + D G +I+ TM++E A + F+ G + G +R
Sbjct: 195 SVRTFDRDDGSEGKVANLVVGDATG-RIRVTMWDERAEQVT-AFETGDTVEVIDGYVRER 252
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVV 316
+ E+++ +E+ + ++P PI++ V E VDI GVV
Sbjct: 253 DGSL-------ELHVGNRGAIEDVDADVEYVPDN----TPIED----VEIGETVDIAGVV 297
Query: 317 QNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
++ P + R +E R+I V D T + V+LW E A
Sbjct: 298 RSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVALWGEKA 337
>gi|357483381|ref|XP_003611977.1| Replication factor A protein [Medicago truncatula]
gi|358344381|ref|XP_003636268.1| Replication factor A protein [Medicago truncatula]
gi|355502203|gb|AES83406.1| Replication factor A protein [Medicago truncatula]
gi|355513312|gb|AES94935.1| Replication factor A protein [Medicago truncatula]
Length = 248
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 10/210 (4%)
Query: 206 RGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKTVQN 265
RG+ V NV + +I AT+ + F + +Y + + + FK ++
Sbjct: 45 RGKTFVMNVHRS---ADKIHATVRKSLVKSFQAKISERSLYELEQIMIGFNEGPFKLTRH 101
Query: 266 DYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNGTELVDIIGVVQNVSPTMSI 325
Y++ + +NS + NET IP F+F + + ++VD+IG +
Sbjct: 102 KYKITMMQNSRWIKIQNETN-IPLNNFDFQSFESILASTVEEKIVDVIGHIVEKDALRET 160
Query: 326 RRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKSLKVGDF 385
+ V D+T+ D R SLW Q + +P + ++ K ++
Sbjct: 161 EKNCRKSGVI--DLTLEDLENRQFHCSLWGNYTDKFLQYMEGYDMSTPAILMQYCKQQNY 218
Query: 386 QG---ISLSTLGRSTVLVSPDLPEAKKLKS 412
G +S S G + ++++ D PE KS
Sbjct: 219 VGMMRVSNSFFG-TNLIINGDYPEFADYKS 247
>gi|448316065|ref|ZP_21505703.1| replication factor A [Natronococcus jeotgali DSM 18795]
gi|445610411|gb|ELY64185.1| replication factor A [Natronococcus jeotgali DSM 18795]
Length = 480
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 198 NMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
++RT+ G EG V N+ + D G +I+ TM++E A + F+ G + G +R
Sbjct: 185 SVRTFDRDDGSEGKVANLVVGDSTG-RIRVTMWDERAEQVT-EFETGDTVEVVDGYVRER 242
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID--ELGRYVNGTELVDIIG 314
+ E+++ +E + ++P+ VPI+ E+G+ V DI G
Sbjct: 243 DGSL-------ELHVGNRGAIEPVDADVEYVPEN----VPIEDVEIGQTV------DIAG 285
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA 358
VV++ P + R +E R+I V D T + V+LW E A
Sbjct: 286 VVRSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVALWGEKA 327
>gi|297813529|ref|XP_002874648.1| hypothetical protein ARALYDRAFT_352148 [Arabidopsis lyrata subsp.
lyrata]
gi|297320485|gb|EFH50907.1| hypothetical protein ARALYDRAFT_352148 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 203 KNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVANKQFKT 262
KN E ++ + DE G++IQA++ + KF + GK + L +F++
Sbjct: 39 KNKPEEFTGIDLLIVDEKGSRIQASVKGKLLDKFQKDLKEGKCCVLMNFELCPNLGKFRS 98
Query: 263 VQNDYEMNLNENSEVEEAVNETAFIPQTK--FNFVPIDE-LGRYVNGTELVDIIGVVQNV 319
+ Y++N + V + IP + FN P E L R + T +DIIG + +
Sbjct: 99 CDHPYKINFIFYT----CVKPSEEIPNLEACFNLCPFPEILARRNDDTIFIDIIGEIVGM 154
Query: 320 SPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELLDNADKSPIVAIKS 379
+ SI + ++ + D + V+LW +LA +V + + P+V + S
Sbjct: 155 NEVKSITTAEGPTKL--LNLQLKDLGDSLIDVALWGKLAEDVYSN-IKSQPSGPVVFLGS 211
Query: 380 L-KVGDFQG 387
L K +QG
Sbjct: 212 LMKTLLYQG 220
>gi|448320473|ref|ZP_21509960.1| replication factor A [Natronococcus amylolyticus DSM 10524]
gi|445605938|gb|ELY59853.1| replication factor A [Natronococcus amylolyticus DSM 10524]
Length = 476
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 25/169 (14%)
Query: 198 NMRTYKNARG-EGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVYYISRGTLRVA 256
+RT+ G EG V N+ + D G +I+ TM++E A + + F+ G TL V
Sbjct: 185 TIRTFDRDDGSEGKVANLVVGDSTG-RIRVTMWDERAEQVTE-FEAGD-------TLEVV 235
Query: 257 NKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPID--ELGRYVNGTELVDIIG 314
+ + E+++ +E + ++P++ VPI+ E+G+ V DI G
Sbjct: 236 DGYVRERDGSLELHVGNRGALEAVDADVEYVPES----VPIEDVEIGQTV------DIAG 285
Query: 315 VVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELA-TNVG 362
VV++ P + R +E R+I V D T + V+LW A T++G
Sbjct: 286 VVRSADPKRTFDRDDGSEG-QVRNIRVQDATG-DIRVALWGSKADTDLG 332
>gi|357515131|ref|XP_003627854.1| Helicase-like protein [Medicago truncatula]
gi|355521876|gb|AET02330.1| Helicase-like protein [Medicago truncatula]
Length = 622
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 456 SLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDALGSGYWCEGCQKNDEECSLR 515
S+GD V ++ A + I ++Y +C C K V+ + + + CE C K + +R
Sbjct: 48 SMGD---VVYNCVATVDDILLKNGLYYISCPHCRKTVS-STETDFNCEYCTKKVDYLKIR 103
Query: 516 YIMVARVCDGSGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHL 575
Y + D + +F E AE++ D+L G D++ +L+ + H+
Sbjct: 104 YRLELPFNDSTKSTIFVLFAEVAEQLAQLKLDDLTPDLENTGRDSNLPKQLQHIIGSKHI 163
Query: 576 LRVSVA 581
+V ++
Sbjct: 164 FQVKLS 169
>gi|414887210|tpg|DAA63224.1| TPA: hypothetical protein ZEAMMB73_948032 [Zea mays]
Length = 176
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 176 PLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVE--LTDEDGTQIQATMFNEAA 233
PL +L N +++++ K R A G + +++ LTD G I + + A
Sbjct: 5 PLSALTLQDRNAEVQIQIHRKWEFR---GAVDNGPILHIDMILTDCTGNAIHCQIPSFLA 61
Query: 234 RKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFN 293
D FQ+GK+Y ++R ++ A +K V D + + + +E + P ++
Sbjct: 62 ATRGDEFQVGKIYKMTRFSVARAKSTYKPVDGDLMLYVTPYTTLELCHTSQSCFPLYVYH 121
Query: 294 FVPIDELG-RYVNGTELVDIIGVVQNVS 320
D++ N D++G++ +S
Sbjct: 122 LTSYDKIDPDGSNARNFHDVLGIITEIS 149
>gi|391326905|ref|XP_003737950.1| PREDICTED: replication factor A protein 1-like [Metaseiulus
occidentalis]
Length = 129
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 300 LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELAT 359
L + VN T VDI+ VV +V P + + V K+ +TV D++ + V + LW+E
Sbjct: 4 LTKPVNTT--VDILVVVFDVRPPQTFNCRDGINRV-KQTVTVLDDSMKMVNLGLWSEF-- 58
Query: 360 NVGQELLDNADKSPIVAIKSLKVGDFQGI-SLSTLGRSTVLVSPDLPEAKKLKSWYESEG 418
VG+ LD + ++ +++L+V D+ G LST + + + +A++L+ W++ +G
Sbjct: 59 -VGK--LDGKEGEAVI-LQNLQVRDYNGTRQLSTTTNTIIREAAGDADAERLRQWFKVDG 114
>gi|118374721|ref|XP_001020548.1| hypothetical protein TTHERM_00218760 [Tetrahymena thermophila]
gi|89302315|gb|EAS00303.1| hypothetical protein TTHERM_00218760 [Tetrahymena thermophila
SB210]
Length = 676
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 37/204 (18%)
Query: 436 NGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACKTCNKKVTDA 495
N + +YS + +G +K F + + I+ ++Y C K V
Sbjct: 483 NQEQRIYSSIEEIIQQAQASEIGQKKE--FYVYGNLVSIQMKNKLYYYRCTCQGKSVLKY 540
Query: 496 LGSGYWCEGCQK--NDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIG---------- 543
G ++CE CQ+ N + + ++ A V D +G + IF++++ ++I
Sbjct: 541 HGDSFFCESCQQFINPQ---VHLMLRAFVQDSTGTIPVMIFDQQSSQLINQIDPSIHVQE 597
Query: 544 -------CSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVR 596
C + E+ QL ++ + + + +E+NNE+ V
Sbjct: 598 AGQYVKNCIENGQEEIIRQL---------FSKLDFARFIFEIQFENKEFNNEQEIAYKVL 648
Query: 597 AVAPVDFAAESKFLLEEISKKVSH 620
+ + ESK+LL KK+ H
Sbjct: 649 KIEKENIKEESKYLL----KKLEH 668
>gi|357448689|ref|XP_003594620.1| hypothetical protein MTR_2g032570 [Medicago truncatula]
gi|355483668|gb|AES64871.1| hypothetical protein MTR_2g032570 [Medicago truncatula]
Length = 277
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 32/299 (10%)
Query: 175 HPLVS-LNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELT--DEDGTQIQATMFNE 231
H +S ++P + +WT+ VRV + YKN + F +EL + G +I A++
Sbjct: 5 HNFISNVSPRKQSWTLVVRVVRAWFGQDYKNKK---LPFFMELVLMNRKGDRIGASIRRT 61
Query: 232 AARKFYDRFQLGKVYYISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTK 291
KF ++ Q G V+ IS + + ++ N+Y+++ N++V+ +++T +P
Sbjct: 62 LIYKFKEQLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVK--LSKTVLVPTNV 119
Query: 292 FNFVPIDE-LGRYVNGTELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVT 350
++F P + LVD + I E +RD T
Sbjct: 120 YSFTPAPHVFNESYDNNYLVD--------VIGVMIGVGVGVEREYERDGTYR------FK 165
Query: 351 VSLWNELATNVGQELLDNADKSPIVAIKSLKVGDFQGISL--STLGRSTVLVSPDLPEAK 408
+L+ E + L ++ +VAI KV FQG + + + +P++ E K
Sbjct: 166 CTLFGEYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALRNAFSYTRITFNPEMGETK 225
Query: 409 KLKSWYESEGKGTSMASIGSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSI 467
+++ K + S SGL L + + + + LT T+ L + V SI
Sbjct: 226 EIR-------KSANTNSPASGLIQLPNSSRIPVNEEFLLLTPRTTIEELKNVNKVIISI 277
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,396,462,856
Number of Sequences: 23463169
Number of extensions: 392474344
Number of successful extensions: 823210
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 436
Number of HSP's that attempted gapping in prelim test: 819002
Number of HSP's gapped (non-prelim): 1397
length of query: 623
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 474
effective length of database: 8,863,183,186
effective search space: 4201148830164
effective search space used: 4201148830164
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)