BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006974
(623 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224079239|ref|XP_002305805.1| predicted protein [Populus trichocarpa]
gi|222848769|gb|EEE86316.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/590 (68%), Positives = 488/590 (82%), Gaps = 14/590 (2%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG ++ + A+IP GKS EESQKLL+QT+AALA+M+S PLD S IEDI IL+SAVSG LL
Sbjct: 72 MGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGPLDFSGIEDITRILDSAVSGTLL 131
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+CAVRRTLRA V ++L ++ GD +RY+PLLE+L+NC+F ELE+K+GFCI
Sbjct: 132 TVGELCAVRRTLRAARAVLERLKDS----GDCSERYAPLLEILQNCSFQIELEKKVGFCI 187
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DC L ILDRASEDLE+IR+ERKRNMENLD LLK ++A+IFQAGGIDKPL+TKRRSR+CV
Sbjct: 188 DCNLSKILDRASEDLEIIRSERKRNMENLDRLLKGISARIFQAGGIDKPLVTKRRSRLCV 247
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
G++ASH+YL+PDG+ LNVSSSG TYFMEP AVE NN+EV LS+SE AEE AILSLLT+E
Sbjct: 248 GVRASHRYLIPDGVVLNVSSSGVTYFMEPGEAVELNNLEVMLSDSEKAEEIAILSLLTSE 307
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS-------FDSSINIE 293
IA+S R+IKY++D ++E+DL+FARA +A WM+GV PI +S+ + SI+IE
Sbjct: 308 IAESARDIKYMLDGIIEVDLSFARAAYAYWMNGVRPIWTSEGCGGISSSGGDYLLSIDIE 367
Query: 294 GIKHPLLLGSSLRSLSA--ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
GI+HPLL G+S + LS S++ N ++ D E+S + G SK +S+FPVPI+IKVEC T
Sbjct: 368 GIRHPLLNGTSRKRLSNILGSNSLNSMEVD-EDSMLDTGKPSKNVSEFPVPINIKVECGT 426
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
RVVVI+GPNTGGKTASMKTLG+ASLMSKAGLYLPAKN P+LPWFD +LADIGDHQSLEQN
Sbjct: 427 RVVVISGPNTGGKTASMKTLGVASLMSKAGLYLPAKNTPKLPWFDFVLADIGDHQSLEQN 486
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LSTFSGHISRI ILE+ S ESLVL+DEI SGTDPSEGVAL+TSIL YLRD V LAVVTT
Sbjct: 487 LSTFSGHISRICKILEVASNESLVLVDEICSGTDPSEGVALSTSILHYLRDHVNLAVVTT 546
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HYADLS LKDKD+RFENAA EFSLETL+PTY+ILWG TGDSNAL+IAKSIGFD II+RA
Sbjct: 547 HYADLSLLKDKDSRFENAAMEFSLETLQPTYQILWGCTGDSNALSIAKSIGFDSNIIERA 606
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+K VE+L PE+QQ R LYQSL+EER +LE+QAR ASLH EIM+LY E
Sbjct: 607 RKWVEKLVPEKQQERSGMLYQSLLEERNRLEAQARKGASLHTEIMELYHE 656
>gi|255556027|ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
gi|223541711|gb|EEF43259.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
Length = 873
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/588 (66%), Positives = 473/588 (80%), Gaps = 42/588 (7%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MGH+ + A IP G+S++ES+ LL+QT+AALAMMQ LD S IEDI GI+NSAVSG LL
Sbjct: 71 MGHSAARSASIPIGESIQESRMLLDQTTAALAMMQYGTLDFSAIEDITGIVNSAVSGNLL 130
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ SE+CAVRRTL A V ++L + GD L+R PLLE+ ++CN +LE+KIGFCI
Sbjct: 131 TVSELCAVRRTLEAAKAVLERLKDG----GDCLERSYPLLEIFRSCNLQIQLEQKIGFCI 186
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DC LLIILDRASEDLELIR ERK+ MENLD+LLK ++ +IFQAGGID+P +TKRRSR+CV
Sbjct: 187 DCNLLIILDRASEDLELIRYERKKTMENLDNLLKGISTRIFQAGGIDRPFVTKRRSRLCV 246
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
G++A+H+YL+PDG+ L+VS SGATYF+EP AVE NN+EV LSNSE AEE AILSLLT+E
Sbjct: 247 GVRATHRYLIPDGVILDVSGSGATYFVEPGDAVELNNLEVMLSNSERAEEIAILSLLTSE 306
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ-------SHVSFDSSINIE 293
IA+SER+IK L+D +LE+DLAFARA +A+ ++GVCP +S+ S ++ SI+IE
Sbjct: 307 IAESERDIKKLLDGILEVDLAFARAAYARQINGVCPTFTSEGYEGEPSSRANYALSIDIE 366
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
GI+HPLLLGSS + FPVPI+IKVEC TRV
Sbjct: 367 GIQHPLLLGSSQQK-------------------------------FPVPINIKVECGTRV 395
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
VVI+GPNTGGKTASMKTLG+ASLMSKAGL+LPA+N P++PWFD++LADIGD+QSLEQNLS
Sbjct: 396 VVISGPNTGGKTASMKTLGIASLMSKAGLFLPARNTPKIPWFDVVLADIGDNQSLEQNLS 455
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFSGHISRI ILE+ S+ESLVLIDEI SGTDPSEGVAL+TSILQYLRDRV LAVVTTHY
Sbjct: 456 TFSGHISRICKILEVTSKESLVLIDEICSGTDPSEGVALSTSILQYLRDRVNLAVVTTHY 515
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
ADLS LKD D++FENAA EFSLETL+PTY+ILWGSTG+SNAL+IAKSIGFD II+RA+K
Sbjct: 516 ADLSLLKDSDSQFENAAMEFSLETLQPTYQILWGSTGNSNALSIAKSIGFDSNIIERAEK 575
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
VE+L PE+QQHRK LY+SLM+ER KLE+QAR AAS+HA+IM+LY E
Sbjct: 576 WVEKLIPEKQQHRKGLLYKSLMDERNKLEAQAREAASVHAQIMELYYE 623
>gi|358346679|ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
gi|355503328|gb|AES84531.1| MutS2 family protein [Medicago truncatula]
Length = 913
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/600 (64%), Positives = 471/600 (78%), Gaps = 23/600 (3%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG + A++P G + SQKLL+QTSAA + Q Q LD S I D+ IL+ +VSG+LL
Sbjct: 59 MGSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQQ-LDFSGIHDLTDILSVSVSGKLL 117
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+C VRRTL + ++ L A + S RYSPLLE+L+NCNFL LE +I FCI
Sbjct: 118 TVPELCTVRRTLSSARELFDTLRHLASVSNHS-HRYSPLLEILQNCNFLMGLERRIEFCI 176
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DC LL+ILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIF+AGGID+P ITKRRSRMCV
Sbjct: 177 DCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCV 236
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
GI+AS++YLLP+GI LN SSSGATYFMEPK A++ NNMEVRLSNSE AEE AILS+L +E
Sbjct: 237 GIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASE 296
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----------SQSHVSF--- 286
IA S+ EI YL+D++LE+DLAFARA +AQWM+GVCPI S + +S
Sbjct: 297 IANSKSEINYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLEVCESVEKDNDISVVQD 356
Query: 287 -DSSINIEGIKHPLLLGSSLRSLS----AASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
D ++NIEG++HPLLL SSL ++S S N+ L + N M S S+GI+DFPV
Sbjct: 357 DDLTVNIEGMRHPLLLESSLENISDNVTLRSGNAAELGNG--NGTMASKSASQGITDFPV 414
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
P+D K+ TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK P+LPWFDLIL D
Sbjct: 415 PVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILVD 474
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGDHQSLEQNLSTFSGHISRI LE+ S++SLVLIDEIGSGTDPSEGVAL+ SILQYLR
Sbjct: 475 IGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLR 534
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ V LAVVTTHYADLS +K+KDT FENAA EFSLETL+PTYR+LWG TGDSNAL+IA+SI
Sbjct: 535 EHVNLAVVTTHYADLSTMKEKDTCFENAAMEFSLETLQPTYRVLWGCTGDSNALSIAQSI 594
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
GFD+ II AQK VE+L+PE+QQ R+ LYQSL EE+ +L++QA AAS+HAEIM++Y E
Sbjct: 595 GFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSE 654
>gi|356521349|ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
Length = 914
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/599 (63%), Positives = 469/599 (78%), Gaps = 21/599 (3%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A A++P G++ +SQ+LL+QTSAA + ++PLD S + D+ IL A SG LL
Sbjct: 61 MGSAAALNARLPIGRTRRDSQRLLDQTSAA--RLVAEPLDFSGVHDLTEILGVATSGHLL 118
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+C VR TL A ++ L A + QRY PLL++L+NCNF LE KI FCI
Sbjct: 119 TIRELCTVRHTLAAARELFDALKRVASA-SNHPQRYLPLLDILQNCNFQVGLERKIEFCI 177
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DCKL IILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIFQAGGID+PLI KRRSRMCV
Sbjct: 178 DCKLSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCV 237
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
GI+ASH+YLLPDG+ LNVSSSGATYFMEPK A++ NN+EVRLS+SE AEE+ ILS+L +E
Sbjct: 238 GIRASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASE 297
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS------------ 288
IA SE +I +L+D++L++DLAFARA +AQWM+GVCPI S + DS
Sbjct: 298 IANSESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQE 357
Query: 289 ----SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS--LSKGISDFPVP 342
+++I GI+HPLLL SSL ++S + + ++ N T+ S + +GISDFPVP
Sbjct: 358 DDDLTVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVP 417
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+D K+ TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK +P+LPWFDLILADI
Sbjct: 418 VDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADI 477
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GDHQSLEQNLSTFSGHISRI ILE+ S +SLVLIDEIG GTDPSEGVAL+ SILQYL+D
Sbjct: 478 GDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKD 537
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
RV LAVVTTHYADLS +K+KDTRF+NAA EFSLETL+PTYRILWG TGDSNAL+IA+SIG
Sbjct: 538 RVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIG 597
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
FDR II RAQK VE+ +PE+QQ R+ LYQSL EER +L++QA AAS+HAEIM +Y E
Sbjct: 598 FDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNE 656
>gi|356521351|ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
Length = 902
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/599 (63%), Positives = 469/599 (78%), Gaps = 21/599 (3%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A A++P G++ +SQ+LL+QTSAA + ++PLD S + D+ IL A SG LL
Sbjct: 61 MGSAAALNARLPIGRTRRDSQRLLDQTSAA--RLVAEPLDFSGVHDLTEILGVATSGHLL 118
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+C VR TL A ++ L A + QRY PLL++L+NCNF LE KI FCI
Sbjct: 119 TIRELCTVRHTLAAARELFDALKRVASA-SNHPQRYLPLLDILQNCNFQVGLERKIEFCI 177
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DCKL IILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIFQAGGID+PLI KRRSRMCV
Sbjct: 178 DCKLSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCV 237
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
GI+ASH+YLLPDG+ LNVSSSGATYFMEPK A++ NN+EVRLS+SE AEE+ ILS+L +E
Sbjct: 238 GIRASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASE 297
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS------------ 288
IA SE +I +L+D++L++DLAFARA +AQWM+GVCPI S + DS
Sbjct: 298 IANSESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQE 357
Query: 289 ----SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS--LSKGISDFPVP 342
+++I GI+HPLLL SSL ++S + + ++ N T+ S + +GISDFPVP
Sbjct: 358 DDDLTVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVP 417
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+D K+ TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK +P+LPWFDLILADI
Sbjct: 418 VDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADI 477
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GDHQSLEQNLSTFSGHISRI ILE+ S +SLVLIDEIG GTDPSEGVAL+ SILQYL+D
Sbjct: 478 GDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKD 537
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
RV LAVVTTHYADLS +K+KDTRF+NAA EFSLETL+PTYRILWG TGDSNAL+IA+SIG
Sbjct: 538 RVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIG 597
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
FDR II RAQK VE+ +PE+QQ R+ LYQSL EER +L++QA AAS+HAEIM +Y E
Sbjct: 598 FDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNE 656
>gi|449457723|ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 890
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/591 (62%), Positives = 462/591 (78%), Gaps = 35/591 (5%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
MG V QKA + FG++ EESQKLL+QT+AA A++ S+ LD S IED++GILNSA+SG+L
Sbjct: 69 MGFDVAQKADVRFGRTREESQKLLDQTTAAEAVVSTSRRLDFSGIEDVSGILNSAISGKL 128
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+ +E+C+VRRTL+A ++++L +A + R+ PL+E+L+NC+FL ELE KI FC
Sbjct: 129 LTIAELCSVRRTLKAARELFEEL-QALAVGNHYSDRFLPLIEILQNCDFLVELERKIEFC 187
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
IDC IILDRASEDLELIR E+KRNME LDSLLK+V+ +I+QAGGID+PLITKRRSRMC
Sbjct: 188 IDCNYSIILDRASEDLELIRLEKKRNMEELDSLLKEVSFKIYQAGGIDRPLITKRRSRMC 247
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
V ++A+HK L+ DGI L+ SSSGATYFMEPK AV+ NNMEVRLSNSE AEE +ILS+L+
Sbjct: 248 VAVRATHKNLVSDGILLSTSSSGATYFMEPKNAVDLNNMEVRLSNSEKAEEISILSMLST 307
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI-------NI 292
EI++SE I+ L+D++LE+DLA ARA + +WM GVCP S++ + +SSI +I
Sbjct: 308 EISESENHIRCLLDKILELDLALARAAYGRWMSGVCPCFSAKGYEGLNSSITDNTLSVDI 367
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI--DIKVECE 350
+ I++PLLL + L+ S + + DFP+PI DIK+ +
Sbjct: 368 DAIQNPLLLSNYLKKFSGS------------------------VPDFPMPIAIDIKIMHQ 403
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
TRVVVI+GPNTGGKTAS+KTLGLASLM+KAG+YLPAKNHP+LPWFDL+LADIGDHQSLEQ
Sbjct: 404 TRVVVISGPNTGGKTASLKTLGLASLMAKAGMYLPAKNHPKLPWFDLVLADIGDHQSLEQ 463
Query: 411 NLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
NLSTFSGHISRI ILE+ S ESLVLIDEIGSGTDPSEGVAL+TSIL+YL++ V LA+VT
Sbjct: 464 NLSTFSGHISRICKILEVSSDESLVLIDEIGSGTDPSEGVALSTSILRYLKNCVNLAIVT 523
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
THYADLS +KD D+ FENAA EFSLETL+PTY+ILWGSTGDSNAL IA+SIGFD II+R
Sbjct: 524 THYADLSRIKDSDSSFENAAMEFSLETLKPTYKILWGSTGDSNALTIAESIGFDPVIIER 583
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
A++ + L PERQ RK L++SL+ ER KLE+Q + ASLHA+I LY E
Sbjct: 584 AKQWMVNLTPERQDERKGSLFKSLIGERDKLEAQRQKVASLHADISALYYE 634
>gi|334183641|ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|6227005|gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2
from Synechocystis sp. and is a member of PF|00488 Muts
family of mismatch repair proteins [Arabidopsis
thaliana]
gi|332196205|gb|AEE34326.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 876
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/584 (59%), Positives = 445/584 (76%), Gaps = 32/584 (5%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA---MMQSQPLDLSTIEDIAGILNSAVSG 57
MG + + A+IP G S EES+ LLN+TSAALA MM+S+ L LS I+D++ I+ AVSG
Sbjct: 71 MGLSATKNAEIPVGNSPEESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG 130
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
QLL+ E+C VR TL A + ++KL +AA D R +PL+++L+ C+F L++KI
Sbjct: 131 QLLTVRELCTVRSTLTAATSTFQKLRKAAISDN----RVTPLVDILQGCDFKDTLQQKIS 186
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLLKK++ +IF AGGI+KPLIT+RRSR
Sbjct: 187 FCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSR 246
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
MCV I+A+HK LLP G+ L+VSSS AT F+EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 247 MCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSIL 306
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T+E+ ++REI +L+DR+LE+D+AFARA A W++GV P ++S+ + +++I+ +H
Sbjct: 307 TSEVVMAQREILHLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQH 366
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLLLGS L S P D+ FPVP+DIKVE +VVVI+
Sbjct: 367 PLLLGSVLGS---------PNGGDI----------------FPVPVDIKVESSAKVVVIS 401
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFDLILADIGD QSLEQ+LSTFSG
Sbjct: 402 GPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSG 461
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
HISRI IL++ S SLVL+DEI SGTDPSEGVALATSILQY+++RV +AVV+THY DLS
Sbjct: 462 HISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAVVSTHYGDLS 521
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+++I++ A K E+
Sbjct: 522 RLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEK 581
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
L PE+ RK L+QSLMEER KL+ QA A+ H ++M+LY E
Sbjct: 582 LNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHE 625
>gi|15217840|ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|332196204|gb|AEE34325.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 857
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/584 (59%), Positives = 445/584 (76%), Gaps = 32/584 (5%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA---MMQSQPLDLSTIEDIAGILNSAVSG 57
MG + + A+IP G S EES+ LLN+TSAALA MM+S+ L LS I+D++ I+ AVSG
Sbjct: 71 MGLSATKNAEIPVGNSPEESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG 130
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
QLL+ E+C VR TL A + ++KL +AA D R +PL+++L+ C+F L++KI
Sbjct: 131 QLLTVRELCTVRSTLTAATSTFQKLRKAAISD----NRVTPLVDILQGCDFKDTLQQKIS 186
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLLKK++ +IF AGGI+KPLIT+RRSR
Sbjct: 187 FCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSR 246
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
MCV I+A+HK LLP G+ L+VSSS AT F+EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 247 MCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSIL 306
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T+E+ ++REI +L+DR+LE+D+AFARA A W++GV P ++S+ + +++I+ +H
Sbjct: 307 TSEVVMAQREILHLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQH 366
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLLLGS L S P D+ FPVP+DIKVE +VVVI+
Sbjct: 367 PLLLGSVLGS---------PNGGDI----------------FPVPVDIKVESSAKVVVIS 401
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFDLILADIGD QSLEQ+LSTFSG
Sbjct: 402 GPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSG 461
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
HISRI IL++ S SLVL+DEI SGTDPSEGVALATSILQY+++RV +AVV+THY DLS
Sbjct: 462 HISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAVVSTHYGDLS 521
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+++I++ A K E+
Sbjct: 522 RLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEK 581
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
L PE+ RK L+QSLMEER KL+ QA A+ H ++M+LY E
Sbjct: 582 LNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHE 625
>gi|297840849|ref|XP_002888306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334147|gb|EFH64565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 891
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/593 (58%), Positives = 447/593 (75%), Gaps = 43/593 (7%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSG 57
MG + + A+IP G S EES+ LL++T+AALA M+ SQ L LS I+D++ I+ AV+G
Sbjct: 79 MGLSATKNAEIPVGNSPEESRNLLDETAAALAAMEMMESQRLGLSEIQDLSDIVERAVAG 138
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
QLL+ E+C+VR TL A +V++KL +AA D +R SPL+ L++ C+F L++KIG
Sbjct: 139 QLLTVRELCSVRSTLMAATSVFQKLRKAAISD----KRVSPLVGLVQGCDFKDTLQQKIG 194
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
FCIDC + +ILDRASEDLE+IR+ER+RNME LDSLLKK++ QIFQAGGID+PLIT+RRSR
Sbjct: 195 FCIDCNMSMILDRASEDLEIIRSERRRNMEKLDSLLKKISTQIFQAGGIDRPLITQRRSR 254
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
MCV I+A+HK LLP G+ L+VSSS AT ++EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 255 MCVAIRATHKSLLPGGVVLSVSSSRATCYIEPKEAVELNNMEVRHANSEKAEEMAILSIL 314
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ---------SHVSFDS 288
T+E++ ++++I +L+DR+LE+D+AFARA A+WM+GV P ++S+ H S
Sbjct: 315 TSEVSMAQKDILHLLDRILELDIAFARASHAKWMNGVYPNVTSEHTKTPGLGGDHKSL-- 372
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
S++I+ +HPLLLGS L GS + G+ FPVPIDIKVE
Sbjct: 373 SVDIDSAQHPLLLGSVL------------------------GSPNDGMV-FPVPIDIKVE 407
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VVVI+GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFD ILADIGD QSL
Sbjct: 408 SRAKVVVISGPNTGGKTALLKTLGLISLMSKSGMYLPAKNCPRLPWFDFILADIGDPQSL 467
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFSGHISRI IL++ S SLVL+DEI SGTDPSEGVALATSILQY+++RV +AV
Sbjct: 468 EQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAV 527
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
V+THY DLS LKD + +F+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+ I+
Sbjct: 528 VSTHYGDLSRLKDNEPQFQNAAMEFSMETLQPTFRVLWGSTGLSNALTVAKSIGFNTGIL 587
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ A K E+L PE+ RK L+QSL+EER KL+ QA + H ++M+LY E
Sbjct: 588 ENAHKWTEKLNPEQDVERKGSLFQSLVEERNKLKLQASKTEAFHRDLMNLYHE 640
>gi|218195837|gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indica Group]
Length = 916
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/585 (54%), Positives = 436/585 (74%), Gaps = 19/585 (3%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 92 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSSAIAAAAGARLLA 149
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 150 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 208
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 209 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 268
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 269 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 328
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 329 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 388
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL +SLS ++ K + + + +S P+P+D++V +TR++VI
Sbjct: 389 HPLLLE---QSLSMVKESTGVGKGQLSDEHL--------VSPMPIPLDMQVRNDTRIIVI 437
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LSTFS
Sbjct: 438 SGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFS 497
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYADL
Sbjct: 498 GHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADL 557
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 558 SRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVE 617
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY E
Sbjct: 618 KLLPDKQKERQGLLYGSLLDERKLLESQANEAASVVSDVERLYNE 662
>gi|32487407|emb|CAE05741.1| OSJNBb0017I01.21 [Oryza sativa Japonica Group]
Length = 921
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 319/587 (54%), Positives = 436/587 (74%), Gaps = 23/587 (3%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 97 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSAAIAAAAGARLLA 154
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 155 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 213
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 214 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 273
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 274 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 333
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 334 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 393
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVV 354
HPLLL SL + E++ + G LS +S P+P+D++V +TR++
Sbjct: 394 HPLLLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRII 440
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LST
Sbjct: 441 VISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLST 500
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FSGHISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYA
Sbjct: 501 FSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYA 560
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
DLS LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+
Sbjct: 561 DLSRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEW 620
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
VE+L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY E
Sbjct: 621 VEKLLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNE 667
>gi|90399000|emb|CAJ86270.1| H0901F07.7 [Oryza sativa Indica Group]
Length = 889
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 317/585 (54%), Positives = 436/585 (74%), Gaps = 19/585 (3%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 92 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSSAIAAAAGARLLA 149
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 150 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 208
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 209 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 268
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 269 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 328
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 329 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 388
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL +SLS ++ K + + + +S P+P+D++V +TR++VI
Sbjct: 389 HPLLLE---QSLSMVKESTGVGKGQLSDEHL--------VSPMPIPLDMQVRNDTRIIVI 437
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LSTFS
Sbjct: 438 SGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFS 497
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYADL
Sbjct: 498 GHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADL 557
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 558 SRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVE 617
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY E
Sbjct: 618 KLLPDKQKERQGLLYGSLLDERKLLESQANEAASVVSDVERLYNE 662
>gi|242074804|ref|XP_002447338.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
gi|241938521|gb|EES11666.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
Length = 912
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 334/585 (57%), Positives = 440/585 (75%), Gaps = 31/585 (5%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++ ++QT+AA+ + PLD +ED++ ++ +A SG+ L+
Sbjct: 92 GRAACEGRRVPVGRSREESERFIDQTAAAVLL--PTPLDFGGVEDVSALVAAAASGRALA 149
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+CAV R++RAV V+ +L A+ D RYS L+++L+ C+FLTEL ++I FC+D
Sbjct: 150 VRELCAVGRSIRAVRAVFDQLKRLADEMPDG--RYSSLVDILQGCDFLTELVQRIEFCLD 207
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ LE+IR ER+RN+E L+SLLK AA+IFQAGGID PL+TKRRSRMCVG
Sbjct: 208 STLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFQAGGIDSPLVTKRRSRMCVG 267
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYF+EP+ AVE NN EV+LS E AEE AILSLLT+ I
Sbjct: 268 VKASHKHLVPGGIVLSSSGSGATYFVEPRDAVELNNREVKLSGDERAEELAILSLLTSMI 327
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A S+ +I+ LMD+VLE+DLA AR +A+W +GV P S SQS D S+ IEGI+
Sbjct: 328 ADSQLKIRNLMDKVLELDLACARGSYARWTNGVKPTFSDSYTISQSDQCTDYSVYIEGIR 387
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL E S M S ++ S+ PVP+D+ V+ R+VVI
Sbjct: 388 HPLLL---------------------EQSLMAEESTTRA-SEMPVPLDMWVKKHARIVVI 425
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGL+SLMSKAG++ PAK PR+PWFD +LADIGDHQSLE +LSTFS
Sbjct: 426 SGPNTGGKTATMKTLGLSSLMSKAGMFFPAKGSPRIPWFDQVLADIGDHQSLEHSLSTFS 485
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+E+VS++SLVLIDEIGSGTDPSEGVAL+TSIL+YL +V LA+VTTHYADL
Sbjct: 486 GHISRLRKIVEIVSKDSLVLIDEIGSGTDPSEGVALSTSILKYLASKVNLAIVTTHYADL 545
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S L+ D RFENAA EF +ETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 546 SRLQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVE 605
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+L P++Q+ R+ LY SL++E++ LESQA AAS+ +++ LY E
Sbjct: 606 KLLPDKQKERQGLLYDSLLDEKKLLESQANEAASVLSQVEGLYNE 650
>gi|357162691|ref|XP_003579491.1| PREDICTED: mutS2 protein-like [Brachypodium distachyon]
Length = 927
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 328/583 (56%), Positives = 436/583 (74%), Gaps = 25/583 (4%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEI 65
++P G+S EES++LL QT+AA A++ S PLD + D++ ++ +A G+LL+ EI
Sbjct: 106 GRVPVGRSREESERLLEQTAAAAALLSSSSSAPLDFGGVGDVSAVVAAAARGRLLAVREI 165
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
C V R+LRA V+ ++ + D +RYSPLL++L++C+FLTEL + I FC+D L
Sbjct: 166 CGVGRSLRAARGVFDQVKGLTDEMPD--ERYSPLLDILQDCDFLTELVQMIEFCLDSNLS 223
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
++LDRASE L IR ER+ N+E L+SLL+ + +IFQAGG+D PL+TKRRSRMCVG+KAS
Sbjct: 224 MVLDRASEKLGTIRKERRSNIEILESLLRDASMKIFQAGGVDSPLVTKRRSRMCVGVKAS 283
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
HK+LLP GI L+ S SGATYFMEP+ AV+ NNMEV+LS+ E EE A+L LLT+ IA S
Sbjct: 284 HKHLLPGGIVLSSSGSGATYFMEPRDAVKLNNMEVKLSSDERTEELAVLGLLTSRIADSR 343
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIKHPLL 300
+I++LM +++E+DLA AR +A W++GV P S Q S D S+ I+GI+HPLL
Sbjct: 344 MKIRHLMGKIMELDLACARGSYALWINGVRPAFSDRDNSGQLDPSSDFSVFIDGIQHPLL 403
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK--GISDFPVPIDIKVECETRVVVITG 358
L S ++ S+ E+ G LS+ +S PVP+D+ V+ +TR+VVI+G
Sbjct: 404 LEQSF-GIAKGST------------EVGKGQLSEEHPVSSMPVPLDMHVKSDTRIVVISG 450
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKTA+MKTLGLA+LMSKAG++ PAK P+LPWFD +LADIGDHQSLE +LSTFSG+
Sbjct: 451 PNTGGKTATMKTLGLATLMSKAGMFFPAKGSPKLPWFDQVLADIGDHQSLENSLSTFSGN 510
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
ISR+ I+++VSR+SLVLIDEIGSGTDPSEGV+L+TSIL+YL R+ LA+VTTHYADLS
Sbjct: 511 ISRLRKIVQVVSRDSLVLIDEIGSGTDPSEGVSLSTSILKYLAGRLNLAIVTTHYADLSR 570
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
LK D RFENAA EF LETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE+L
Sbjct: 571 LKAVDGRFENAAMEFCLETLKPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVEKL 630
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
P++Q+ R+ LY SL++ER LESQA AS+ +E+ LY E
Sbjct: 631 LPDKQKERQGLLYGSLLDERNLLESQANEVASVLSEVEVLYNE 673
>gi|414584744|tpg|DAA35315.1| TPA: hypothetical protein ZEAMMB73_219783 [Zea mays]
Length = 901
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/585 (57%), Positives = 437/585 (74%), Gaps = 31/585 (5%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++L++QT+AA+ + PLD +ED++ ++ +AV+G+ L+
Sbjct: 90 GRAACEGGRVPVGRSREESERLIDQTAAAVLL--PTPLDFGGVEDVSALVAAAVAGRALA 147
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+CAV R++RAV V+ +L A+ D RYS L+++L+ C+FLTEL ++I FC+D
Sbjct: 148 VRELCAVGRSIRAVRAVFHQLKRLADEMPDG--RYSSLVDILQGCDFLTELVQRIEFCLD 205
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ LE+IR ER+RN+E L+SLLK AA+IF AGGID PL+TKRRSRMCVG
Sbjct: 206 STLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFLAGGIDNPLVTKRRSRMCVG 265
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ AVE NN EV+LS E AEE +LSLLT+ I
Sbjct: 266 VKASHKHLMPGGIVLSSSGSGATYFMEPQDAVELNNREVKLSGEERAEELVVLSLLTSMI 325
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A S+ +I+ LMD VLE+DLA AR +A W + V P + SQS D SI IEGI+
Sbjct: 326 ADSQLKIRNLMDNVLELDLACARGSYALWTNSVRPTFTDSYTISQSDQCNDYSIYIEGIR 385
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL SL + +S E SEM PVP+D+ V+ R+VVI
Sbjct: 386 HPLLLEQSLMAE----------ESTTEASEM------------PVPLDMWVKKNARIVVI 423
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGL+SLMSKAG++ PAK PR+PWFD +LADIGDHQSLE +LSTFS
Sbjct: 424 SGPNTGGKTATMKTLGLSSLMSKAGIFFPAKGRPRIPWFDQVLADIGDHQSLEHSLSTFS 483
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+E+VS++SLVLIDEIGSGTDP+EGVAL+TSIL+YL RV LA+VTTHYADL
Sbjct: 484 GHISRLRKIVEMVSKDSLVLIDEIGSGTDPAEGVALSTSILKYLASRVNLAIVTTHYADL 543
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S L+ D RFENAA EF +ETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 544 SRLQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVE 603
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+L P++Q+ R+ LY SL++E+ LESQA AAS+ +++ LY E
Sbjct: 604 KLLPDKQKERQGLLYDSLVDEKELLESQANEAASVLSQVEGLYNE 648
>gi|222629785|gb|EEE61917.1| hypothetical protein OsJ_16650 [Oryza sativa Japonica Group]
Length = 841
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 298/524 (56%), Positives = 397/524 (75%), Gaps = 27/524 (5%)
Query: 65 ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKL 124
+CA L V + K L+E DG S Y+PLL+++++C+FLTEL ++I FC+D L
Sbjct: 84 VCA---RLAGVFDQLKTLSEETP-DGRS---YTPLLDIMQDCDFLTELVQRIEFCLDYTL 136
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG+KA
Sbjct: 137 SVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVGVKA 196
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
SHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ IA S
Sbjct: 197 SHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSIADS 256
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIKHPL 299
E +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+HPL
Sbjct: 257 EMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQHPL 316
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVVVIT 357
LL SL + E++ + G LS +S P+P+D++V +TR++VI+
Sbjct: 317 LLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVIS 363
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LSTFSG
Sbjct: 364 GPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSG 423
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
HISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYADLS
Sbjct: 424 HISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADLS 483
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE+
Sbjct: 484 RLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVEK 543
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY E
Sbjct: 544 LLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNE 587
>gi|168030914|ref|XP_001767967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680809|gb|EDQ67242.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 964
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/590 (45%), Positives = 371/590 (62%), Gaps = 42/590 (7%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
M AV +K +P G+++ ES++L QT AA + S PL+ S IED+ + A SG +
Sbjct: 98 MAVAVARKGDLPIGRTVVESEELQAQTVAA--QLLSSPLEFSGIEDLRKFIEDAQSGNVC 155
Query: 61 SPSEICAVRRTLRAVNNVWKKLT--EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
E+C VR+TL AV + ++ + L PL ++ CN +ELE I +
Sbjct: 156 QLEELCLVRKTLAAVRRLHNQVVGQSHSSLHVSGAASIGPLQAVMLGCNLCSELESAIEY 215
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+DC ILDRAS L +R R+ N L+SL+K+ AA +F AGG+D L+TKRR RM
Sbjct: 216 CLDCSRSTILDRASSKLASVRLMRQENSMALESLIKETAAMVFSAGGMDSQLVTKRRGRM 275
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV ++AS K LL G+ L+VS++GATYFMEP+ A+ FNN E++L+ E EE A+L LT
Sbjct: 276 CVAVRASQKGLLKGGVTLDVSNTGATYFMEPESAIHFNNEEIQLAEEEKLEEIAVLRQLT 335
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSFDSS 289
+ + ++ L++RV +DLA ARAG + W++G P+ SS S + D++
Sbjct: 336 FMLLDTSDDVIDLLERVTTLDLACARAGHSAWLNGARPVFVNSMADSMSSSHSSSALDTT 395
Query: 290 --------INIEGIKHPLLLGSSL-------------RSLSAASSNSNPLKSDVENSEMT 328
++I+G++HPLLLGS+L R + +S+ LK VE+S +
Sbjct: 396 PAKEDLLLVDIKGVRHPLLLGSALESPVNSPRYGIYIRQKEKSRRSSSGLKGAVESSNVD 455
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
PVPIDI + +VV ITGPNTGGKTA++KTLG+ +LM+KAGL LPA
Sbjct: 456 --------RMLPVPIDINIRTGVKVVTITGPNTGGKTAALKTLGVVALMAKAGLCLPATG 507
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
PRLPWFD ILADIGD QSLE+NLSTFSGHI R+ ILE + +SL+L+DEIG GTDPSE
Sbjct: 508 VPRLPWFDSILADIGDDQSLERNLSTFSGHIRRVRQILEAGTAQSLILLDEIGGGTDPSE 567
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALAT+IL+ L V L + TTH A+L LKD D FENA+ EF ++TLRPTYR+LWG
Sbjct: 568 GAALATAILRNLAASVQLTLATTHCAELRTLKDHDPEFENASVEFDVKTLRPTYRVLWGI 627
Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
G SNALNIA S+GFD +++ RA++LV +L P R +EL L+++R
Sbjct: 628 AGQSNALNIAASLGFDSEVLTRARELVTKLVPASLGARSTELMVPLVKQR 677
>gi|302758310|ref|XP_002962578.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
gi|300169439|gb|EFJ36041.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
Length = 825
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/588 (44%), Positives = 364/588 (61%), Gaps = 40/588 (6%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A + + +P GK+ E+S+ L +QT+ A + + L +D+ ++ +A+SG+
Sbjct: 28 MGVAAARGSNLPVGKNREDSEGLQDQTADAHKLAGT--LRFLGAKDVTKVVEAAISGEFC 85
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRY--SPLLELLKNCNFLTELEEKIGF 118
E+C+V+ TL + +L A G L+R SPL +++ +EL E I
Sbjct: 86 HVGELCSVKDTLECARRLHDQLF-AKGGGGLELERLELSPLQRIMQGLELCSELREDIDK 144
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+D K I+LDRAS L +R +R+ NM L+SLLK+ A + AGGID IT RR+R+
Sbjct: 145 CLDSKREIVLDRASTKLSQVRRQRQANMTELESLLKETARMVIDAGGIDSMTITTRRARL 204
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+ NN+E++LS +E AEE AI L
Sbjct: 205 CVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERAEEVAICRRLA 264
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKH 297
+ +A S I ++ + +DLA ARA A+W+ V P S+S + IE I+H
Sbjct: 265 SRVAASAASILEQLNAITLVDLACARAKHAKWLGAVKPAFFESKSE---SKGVIIEEIRH 321
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS--DFPVPIDIKVECETRVVV 355
PLLL ++L KG+ +FPVPIDIKV ++V+
Sbjct: 322 PLLLETALE---------------------------KGLDRDNFPVPIDIKVRDGVKIVI 354
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA +PRLPWFD I AD+GD QSLEQNLSTF
Sbjct: 355 ISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTF 414
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
SGH+ R+ I E +SLVLIDEIG GTDP+EG +LAT++L+Y V L +VTTH A
Sbjct: 415 SGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLATAVLKYFAKTVHLCIVTTHSAS 474
Query: 476 LSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
L L D+D FENA+ EF LETLRPTYR+LWG G SNALNIAKS+ FD I+ RA
Sbjct: 475 LKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQSNALNIAKSLQFDSDILSRASY 534
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ +L P + R+S+L LM++ + E A TAA ++I L+ E
Sbjct: 535 WLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVYLSDIETLHNE 582
>gi|302824584|ref|XP_002993934.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
gi|300138206|gb|EFJ04981.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
Length = 825
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 262/588 (44%), Positives = 365/588 (62%), Gaps = 40/588 (6%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A + + +P GK+ E+S+ L +QT+ A + + L +D+ ++ +A+SG+
Sbjct: 28 MGVAAARGSNLPVGKNREDSEGLQDQTADAHKLAGT--LRFLGAKDVTKVVEAAISGEFC 85
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRY--SPLLELLKNCNFLTELEEKIGF 118
+ E+C+V+ TL + +L A G L+R SPL +++ +EL E I
Sbjct: 86 NVGELCSVKDTLECARRLHDQLF-AKGGGGLELERLELSPLQRIMQGLELCSELREDIDK 144
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+D K I+LDRAS L +R +R+ NM LD LLK+ A + AGGID IT RR+R+
Sbjct: 145 CLDSKREIVLDRASTKLSQVRRQRQANMTELDILLKETARMVIDAGGIDSMTITTRRARL 204
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+ NN+E++LS +E AEE AI L
Sbjct: 205 CVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERAEEVAICRRLA 264
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKH 297
+ +A S I ++ ++ +DLA ARA A+W+ V P S+S + IE I+H
Sbjct: 265 SRVAASAASILEQLNAIMLLDLACARAKHAKWLGAVKPAFFESKSE---SKGVIIEEIRH 321
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS--DFPVPIDIKVECETRVVV 355
PLLL ++L KG+ +FPVPIDIKV ++V+
Sbjct: 322 PLLLETALE---------------------------KGLDRDNFPVPIDIKVRDGVKIVI 354
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA +PRLPWFD I AD+GD QSLEQNLSTF
Sbjct: 355 ISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTF 414
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
SGH+ R+ I E +SLVLIDEIG GTDP+EG +LAT++L+Y V L +VTTH A
Sbjct: 415 SGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLATAVLKYFAKTVHLCIVTTHSAS 474
Query: 476 LSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
L L D+D FENA+ EF LETLRPTYR+LWG G SNA+NIAKS+ FD I+ RA
Sbjct: 475 LKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQSNAVNIAKSLQFDSDILSRASY 534
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ +L P + R+S+L LM++ + E A TAA ++I L+ E
Sbjct: 535 WLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVYLSDIETLHNE 582
>gi|115461374|ref|NP_001054287.1| Os04g0680700 [Oryza sativa Japonica Group]
gi|113565858|dbj|BAF16201.1| Os04g0680700 [Oryza sativa Japonica Group]
Length = 497
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/412 (49%), Positives = 287/412 (69%), Gaps = 23/412 (5%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 97 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSAAIAAAAGARLLA 154
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 155 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 213
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 214 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 273
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 274 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 333
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 334 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 393
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVV 354
HPLLL SL + E++ + G LS +S P+P+D++V +TR++
Sbjct: 394 HPLLLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRII 440
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQ
Sbjct: 441 VISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQ 492
>gi|428223909|ref|YP_007108006.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
gi|427983810|gb|AFY64954.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
Length = 791
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 228/582 (39%), Positives = 326/582 (56%), Gaps = 51/582 (8%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
SLEESQ+LL QT L Q+ L I DI L A +LS E+ A+ TL
Sbjct: 40 SLEESQRLLAQTEEVYRLESRQTSGLPFDGIMDIGPSLERAERQGVLSGEELLAIATTLA 99
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
N+ + + + A++ P+L EL+ E+E+ I FCID + + +DRAS
Sbjct: 100 GARNLRRVIDDQADM---------PVLTELVSELRTYPEIEQSIHFCIDDRGEV-MDRAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L IR +++ E + L ++ + QA + + +IT+R R + +KASHK +P
Sbjct: 150 PKLAEIREKQRSQREEVRQTLFRIMQRQSQA--MQESVITQRGDRFVIPVKASHKDAIP- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SGAT ++EP VE NN +L E AEE IL LTAEIA+ ++ L+
Sbjct: 207 GIVHDTSTSGATLYVEPHTVVERNNRLRQLQRQEQAEEAVILGRLTAEIAEVLPTLERLL 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
V +DLA ARA ++ W+ G P ++ + + ++HPLL+ +A
Sbjct: 267 AIVTTLDLAAARARYSFWLGGNVPRFVQRT---AGEVVTLRSLRHPLLVWQQQHEQGSAV 323
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VPID+ ++ + RVV ITGPNTGGKT ++KTLG
Sbjct: 324 ----------------------------VPIDLMIQPQLRVVAITGPNTGGKTVTLKTLG 355
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
LA+LM+KAGLY+ A+ +PWFD ILADIGD QSL+Q+LSTFSGHI RIV IL+ V+ +
Sbjct: 356 LAALMAKAGLYVAAREPVEIPWFDQILADIGDEQSLQQSLSTFSGHIRRIVRILDRVTPD 415
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA ++LQ L D L V TTH+ +L LK +D RFENA+ E
Sbjct: 416 SLVLLDEVGAGTDPTEGSALAIALLQTLADAAQLTVATTHFGELKALKYQDDRFENASVE 475
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F +L PTYR+LWG G SNAL IA+ +G ++ +AQ+ V E +++
Sbjct: 476 FDDVSLSPTYRLLWGIPGRSNALTIARRLGLSDSVVAQAQQRVGGSASE----EVNQVIA 531
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQ 594
L +RR+ E +A AA + + L+ E + A + R Q
Sbjct: 532 GLEAQRRRQEDKATEAAKILVQAEQLHAEVARKAGLLKQREQ 573
>gi|166365089|ref|YP_001657362.1| recombination and DNA strand exchange inhibitor protein
[Microcystis aeruginosa NIES-843]
gi|166087462|dbj|BAG02170.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
Length = 789
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|425465434|ref|ZP_18844743.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
gi|389832333|emb|CCI24146.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
Length = 789
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 321/581 (55%), Gaps = 54/581 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
DRAS L IR + K E + L+ + + Q G I + +IT+R R + +KA+
Sbjct: 145 S-DRASPQLREIRGQMKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSDRWVIPVKAAQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA++
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIAEAFE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWWQ--- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K + E+ VPI++++ E RVV ITGPNTGGKT
Sbjct: 313 ------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYRDSRF 467
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E Q
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQ-- 525
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 526 ---VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|440751890|ref|ZP_20931093.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
gi|440176383|gb|ELP55656.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
Length = 789
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 228/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSLEQ+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLEQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|425450195|ref|ZP_18830027.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
gi|389769051|emb|CCI05979.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
Length = 789
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 226/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ +PI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRAN 563
>gi|425460157|ref|ZP_18839639.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
gi|389827152|emb|CCI21729.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
Length = 789
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 228/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KAS K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KASQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRAN 563
>gi|422303606|ref|ZP_16390957.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
gi|389791362|emb|CCI12788.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
Length = 789
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 322/581 (55%), Gaps = 54/581 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
DRAS L IR + K E + L+ + + Q G I + +IT+R R + +KA+
Sbjct: 145 S-DRASPQLREIRGQMKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSDRWVIPVKAAQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA++
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIAEAFE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWWQ--- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K + E+ VPI++++ E RVV ITGPNTGGKT
Sbjct: 313 ------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA++M+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAAVMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYRDSRF 467
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G + +I+ A+ + L E Q
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVTEARNHLGGLSEEINQ-- 525
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 526 ---VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|425446466|ref|ZP_18826469.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
gi|389733282|emb|CCI02921.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
Length = 789
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRAN 563
>gi|425456967|ref|ZP_18836673.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
gi|389801826|emb|CCI19076.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
Length = 789
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILGALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRAN 563
>gi|425469689|ref|ZP_18848604.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
gi|389880428|emb|CCI38809.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
Length = 789
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 225/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP ++ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLEQIEEEKILRQLSNTIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ +PI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|390440129|ref|ZP_10228481.1| MutS2 protein [Microcystis sp. T1-4]
gi|389836495|emb|CCI32605.1| MutS2 protein [Microcystis sp. T1-4]
Length = 789
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 323/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVLPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYQ 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G + +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|443646823|ref|ZP_21129501.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
gi|159028850|emb|CAO90655.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335652|gb|ELS50116.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
Length = 789
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 322/581 (55%), Gaps = 54/581 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
DRAS L IR + K E + L+ + + Q G I + +IT+R R + +KA+
Sbjct: 145 S-DRASPQLREIRGQIKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSERWVIPVKAAQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA++
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIAEAFE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----RFIDGSETITLRNLRHPLLWWQ--- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K + E+ +PI++++ E RVV ITGPNTGGKT
Sbjct: 313 ------------KHHEQGGEV-------------IPINVQITPEIRVVAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYQDSRF 467
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G + +I+ A+ + L E Q
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEINQ-- 525
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 526 ---VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRAN 563
>gi|425439812|ref|ZP_18820127.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
gi|389719875|emb|CCH96352.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
Length = 789
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 322/585 (55%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRAN 563
>gi|425434478|ref|ZP_18814947.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
gi|389676022|emb|CCH94894.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
Length = 789
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 225/585 (38%), Positives = 321/585 (54%), Gaps = 62/585 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERGHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KAS K +P GI + SS+GAT+++EP ++ N + E EE IL L+ IA
Sbjct: 198 KASQKEQIP-GIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ +PI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RR+ ES+A+ A+ L + Y E ST A+
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRAN 563
>gi|434396858|ref|YP_007130862.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
gi|428267955|gb|AFZ33896.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
Length = 799
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 220/593 (37%), Positives = 332/593 (55%), Gaps = 57/593 (9%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS----TIEDIAGILNSAVS 56
+G + Q+P K+ ES +LL QT ++ Q LD S IEDI L A
Sbjct: 27 LGTVAARGLQLPTTKT--ESLQLLAQTKEVYSL--EQQLDSSWSFKGIEDIGESLERAKI 82
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G LLS E+ + TL V + + + E L +L+ ELE++I
Sbjct: 83 GGLLSAQELLDLATTLAGVRRLRRTIDAKTE-------DLPTLTQLVTELRTYPELEQEI 135
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
CID + + DRA+ L IR++ KR + + +L+ + + Q G + + +IT+R
Sbjct: 136 HHCIDDRGEVT-DRANPKLAEIRSQIKRLRDKIYKILQNIVQK--QGGAVQEAVITQRDG 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +KA K +P GI ++SS+G+T ++EP V+ N + E EE A+L
Sbjct: 193 RFVIPVKAPQKDSIP-GIVHDISSTGSTLYVEPNAVVQLGNQLRQAERQEKREEEAVLRA 251
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
LT ++A + +++ L+ +DLA ARA ++ W+ P V+ ++ + ++
Sbjct: 252 LTEKVAAVQEDLEQLLAIATVLDLATARARYSWWLGANPPRFVD---VNQGETVTLRQLR 308
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL+ + + +E+ VPID++++ + RVV I
Sbjct: 309 HPLLVWQ---------------QQHEQGTEV-------------VPIDVQIQPQIRVVAI 340
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GLA+LM+KAGL++PAK +PWF+ +LADIGD QSL+Q+LSTFS
Sbjct: 341 TGPNTGGKTVTLKTIGLAALMAKAGLFIPAKEPVEIPWFEQVLADIGDEQSLQQSLSTFS 400
Query: 417 GHISRIVDILELVS-RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
GHI RI I+E S ++SL+L DEIG+GTDP+EG ALA +IL+YL ++ L + TTHY +
Sbjct: 401 GHIRRISRIIETSSLQDSLILFDEIGAGTDPAEGSALAIAILKYLAEKALLTIATTHYGE 460
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF+ +TL+PTYR+LWG G SNAL IA +G +II+ AQ+
Sbjct: 461 LKALKYQDERFENASVEFNDQTLKPTYRLLWGIPGRSNALTIAHRLGLKSEIIEDAQQ-- 518
Query: 536 ERLRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIMDLYREDSTSAS 587
R ++ L S +E ERR+ E++A+ A L + Y E S AS
Sbjct: 519 ---RVGVSASQELNLVISALEAERREQENKAKEATKLLEQTERFYTEVSAKAS 568
>gi|359461621|ref|ZP_09250184.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris sp. CCMEE 5410]
Length = 794
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 334/582 (57%), Gaps = 55/582 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQ---LLSPSEIC 66
++P ++E S+ LL QT + ++Q L T E I I + V Q +LS E+
Sbjct: 34 ELPIPTTVEGSETLLQQTQEVYDL-ETQLLTALTFEGIHDIRAALVRSQRQGILSGEELL 92
Query: 67 AVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
V TL N+ + + EL L +L+ + ELE++I CID + +
Sbjct: 93 QVATTLLGSRNLRRLINRYPEL--------VSLNQLVADLRTYPELEQEIRHCIDEQGEV 144
Query: 127 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
DRASE L +IR ER+R + N + ++L+++ + + + + LIT+R R V +KA
Sbjct: 145 A-DRASEKLMVIR-ERQRQVRNDVQTILQRILQR--KGAALQERLITQRSDRFVVPVKAP 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
K +P GI + S+SGAT ++EPK VE NN +L+ E AE AI LT ++A+ +
Sbjct: 201 QKDAVP-GIVHDASTSGATLYIEPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVQ 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
++ L+ V +DLA ARA ++ W+ P +++ ++ + ++HPLL+
Sbjct: 260 EDLDALLQIVTAVDLATARARYSYWLGANRPQFVNRAA----ETLTLRRLRHPLLVWQ-- 313
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+ + E+ V ID+ ++ E RVV ITGPNTGGKT
Sbjct: 314 -------------QHHEQGPEV-------------VAIDVTIQPEIRVVAITGPNTGGKT 347
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I
Sbjct: 348 VTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEI 407
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ ++ +SLVL+DE+G+GTDP EG ALA ++L+YL D+ L + TTH+ +L LK D R
Sbjct: 408 IAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQLTIATTHFGELKALKYTDAR 467
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ EF TL+PTYR+LWG G SNAL IA+ +G + ++I AQ L + + +
Sbjct: 468 FENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVI--AQALAQM---DGETD 522
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+++ L ERR+ E++A+ AA L L+++ + AS
Sbjct: 523 DVNQVIAGLETERRQQETRAQAAAKLLQSTEQLHQQVAKKAS 564
>gi|158336591|ref|YP_001517765.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris marina MBIC11017]
gi|158306832|gb|ABW28449.1| MutS2 family protein [Acaryochloris marina MBIC11017]
Length = 794
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 215/582 (36%), Positives = 333/582 (57%), Gaps = 55/582 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQ---LLSPSEIC 66
++P ++E S+ LL QT + ++Q L T E I I + V Q +L E+
Sbjct: 34 ELPIPDTVEASETLLQQTQEVYDL-ETQLLTALTFEGIHDIRAALVRSQRQGILRGEELL 92
Query: 67 AVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
V TL N+ + + EL + L +L+ + ELE++I CID + +
Sbjct: 93 QVATTLLGSRNLRRLINRYPEL--------TSLNQLVADLRTYPELEQEIRHCIDEQGEV 144
Query: 127 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
DRASE L IR ER+R + N + ++L+++ + + + + LIT+R +R V +KA
Sbjct: 145 A-DRASEKLMGIR-ERQRQVRNDVQTILQRILQR--KGAALQERLITQRSNRFVVPVKAP 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
K +P GI + S+SGAT ++EPK VE NN +L+ E AE AI LT ++A+
Sbjct: 201 QKDAVP-GIVHDASTSGATLYIEPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVH 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
++ L+ V +DLA ARA ++ W++ P +++ ++ + ++HPLL+
Sbjct: 260 EDLDALLQIVTLVDLATARARYSYWLEANRPRFVNRAA----DTLTLRRLRHPLLVWQ-- 313
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+ + E+ V ID+ ++ + RVV ITGPNTGGKT
Sbjct: 314 -------------QQHEQGPEV-------------VAIDVTIQPQIRVVAITGPNTGGKT 347
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I
Sbjct: 348 VTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEI 407
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ ++ +SLVL+DE+G+GTDP EG ALA ++L+YL D+ L + TTH+ +L LK D R
Sbjct: 408 IAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQLTIATTHFGELKALKYTDNR 467
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ EF TL+PTYR+LWG G SNAL IA+ +G + ++I +AQ + + +
Sbjct: 468 FENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVIAQAQAQM-----DGETD 522
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+++ L ERR+ E++A+ AA L L+ + + AS
Sbjct: 523 DVNQVIAGLETERRQQETKAQAAAQLLQSTEQLHEQVAKKAS 564
>gi|170079175|ref|YP_001735813.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. PCC 7002]
gi|169886844|gb|ACB00558.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002]
Length = 799
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 326/580 (56%), Gaps = 54/580 (9%)
Query: 13 FGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
F +S +S+ LL QT AL + I DI+ L A G L++ ++ +
Sbjct: 39 FPQSQADSEILLAQTVEMQALDGAVDNGVSFEGIGDISDALERATVGGLIAGKDLLLIAT 98
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
TL V + ++L E AEL+ S L L++ ELE+ I CID + + DR
Sbjct: 99 TLAGVRRL-RRLVENAELE------LSQLTRLVEQVRTYPELEQDIHHCIDDRGDVT-DR 150
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS LE IR + K E + L+++ + +G I + +IT+R R + +KA K +
Sbjct: 151 ASPKLEGIRVKIKGAREQIYQTLQRIMQR--HSGSIQEAVITQRGDRFVLPVKAGQKEQI 208
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P GI ++SS+G+T ++EPKG VE N + E E +L LT ++A+ +++
Sbjct: 209 P-GIVHDISSTGSTLYIEPKGIVELGNRLRQAVKQEEREIEIVLRQLTEKVAEVVEDLEK 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+ +DLA RA ++ W+DG P ++ D + ++HPLL+ +
Sbjct: 268 LLAIATTLDLAMTRARYSLWLDGHPP-----KFIAPDQPTILRQLRHPLLVWQEKQE--- 319
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
E+ E+ +PI++++ E RVV ITGPNTGGKT ++KT
Sbjct: 320 ------------ESLEV-------------IPINVQIRPEIRVVAITGPNTGGKTVTLKT 354
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LG+A+LM+K GL++PA +PWFD +LADIGD QSL+Q+LSTFSGHI R+ I+E +
Sbjct: 355 LGMAALMAKVGLFIPAIAPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRVGRIIEALD 414
Query: 431 RES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ES LVL+DE+G+GTDP+EG ALA ++L+YL D+ L V TTHY +L LK +D RFE
Sbjct: 415 QESQNNLVLLDEVGAGTDPTEGSALAIALLKYLADQTQLTVATTHYGELKALKYEDERFE 474
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF +LRPTY++LWG G SNAL IA+ +G D +I++ AQ L+
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAQRLGLDAEIVETAQDLLGNTNT-----NV 529
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+E+ +L +RR+ E +A+ A +L + Y E S+ A+
Sbjct: 530 NEVIAALEAQRREQEQKAKEAEALLKQTERFYTEVSSKAA 569
>gi|428220318|ref|YP_007104488.1| MutS2 family protein [Synechococcus sp. PCC 7502]
gi|427993658|gb|AFY72353.1| MutS2 family protein [Synechococcus sp. PCC 7502]
Length = 697
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 333/610 (54%), Gaps = 60/610 (9%)
Query: 15 KSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+S + SQ+LL QT A L S L L ++DI+G L A +LSP E+ A+ TL
Sbjct: 38 QSYDRSQELLTQTKEAYYLETKLSGGLSLEGVQDISGALARAEVQGVLSPLELFAIATTL 97
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
N+ + L D+ + L L+ + +LE++I CI+ + +L+RAS
Sbjct: 98 AGARNLRRSL--------DNAENCPALQALVSDVRTYPDLEKEIYHCIE-EGGTVLERAS 148
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
E L IR + E + + L+ + + + + + +IT+R R + +KASHK +
Sbjct: 149 EKLGNIRRTSHQVREKIINTLQGIIQR--KNNALQENIITQRGDRYVLSVKASHKDQI-Q 205
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S SG T +EP V NN +L E E IL+ L+A++ ++ L+
Sbjct: 206 GIVHDASGSGLTLLIEPSSVVAGNNDLRQLVAREQREIEIILTQLSAKVTAVAEDLSRLL 265
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS---INIEGIKHPLLLGSSLRSLS 309
+ EIDLA ARA +A W+ P LS S + I + ++HPLL+
Sbjct: 266 AILTEIDLAIARARYAYWLKANPPNLSKSQPQSLSQNPQLITLRNLRHPLLVWQ------ 319
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+ + S TV VP+DI + E +VVVITGPNTGGKTA++K
Sbjct: 320 -----------EQQESGRTV-----------VPVDILISPEIKVVVITGPNTGGKTATLK 357
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T GLA++M+KAG+++PA +PWFDLILADIGD QSL+QNLSTFSGHI RI ILEL+
Sbjct: 358 TFGLAAIMAKAGMFIPAPEPVEIPWFDLILADIGDEQSLQQNLSTFSGHIRRIGRILELI 417
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL+DE+G+GTDPSEG A+AT++L++L + L + TTH+ +L LK ++ +FENA
Sbjct: 418 TPASLVLLDEVGAGTDPSEGSAIATALLEHLANHANLTIATTHFGELKTLKYQNPQFENA 477
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF L PTY++LWG G SNAL IA+ +G II AQ V + SE
Sbjct: 478 SVEFDDVQLAPTYKLLWGIPGRSNALAIARRLGLPEDIISSAQNHV--------GYGSSE 529
Query: 550 LYQSLME---ERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSKVDF 606
+ + E +RR+ + + A L AE+ L++E S + + +YQ +K +
Sbjct: 530 INLVIAELETQRRQQTEKTQAATILLAEMEKLHKEISDKSQLLRSQYQ----ELRAKQEI 585
Query: 607 DAIPNIDQCK 616
+ I+Q K
Sbjct: 586 EVTAAINQAK 595
>gi|427417145|ref|ZP_18907328.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
gi|425759858|gb|EKV00711.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
Length = 818
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 213/592 (35%), Positives = 317/592 (53%), Gaps = 67/592 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
+G + +IP +S ES++LL QT A + + PL+ +ED+ L A +L
Sbjct: 27 LGALAARHGRIPEHQS--ESEQLLAQTREAYRLEEKSPLNFRGVEDMGDALERAKRQAIL 84
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
S E+ + TL + + + D + + L L+ ELE++I CI
Sbjct: 85 SGDELLHIATTLAGARQLRRTI------DAQEEEAFPVLQALVGQLRTYPELEKEIHHCI 138
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
D + + DRA+ L IR K + L + L+++ + +G + + LIT+R R +
Sbjct: 139 DDRGKVT-DRANPKLAGIRKNLKNTHDQLHAKLQRIMQR--HSGVLQETLITQRAGRFVI 195
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA K +P GI +VS+SGAT ++EP+G VEF N +L E EE + LT +
Sbjct: 196 PVKAPQKESIP-GIVHDVSTSGATLYIEPQGVVEFGNRLRQLERQETREEELVRQRLTEQ 254
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
+A +++ LM V +DLA ARA ++ W++ P S + + + ++HP+L
Sbjct: 255 VAAVSEDLEQLMAIVTTLDLATARARYSLWLEANPPRFSEANERTV-----LRQLRHPIL 309
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ P TV VP DI + + RVV ITGPN
Sbjct: 310 VWQQ-------RHEEGP----------TV-----------VPTDITMRPDIRVVAITGPN 341
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KTLGLA+LM+K GL++PA+ LPWFD +LADIGD QS+EQ+LSTFSGHI
Sbjct: 342 TGGKTVTLKTLGLAALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIR 401
Query: 421 RIVDILELVSRE------------------SLVLIDEIGSGTDPSEGVALATSILQYLRD 462
RI IL+ + + SLVL+DE+G+GTDP+EG ALA S+LQ+L +
Sbjct: 402 RIGRILDAIGADGVDDAGNTASMGTAHPTNSLVLLDEVGAGTDPTEGSALAISLLQHLAN 461
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L V TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA+ +G
Sbjct: 462 HTRLTVATTHFGELKALKYQDERFENASVEFDDVSLSPTYRLLWGIPGRSNALTIARRLG 521
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
+ +I AQ V + Q +++ L +R++ E QA+ AA + A+
Sbjct: 522 LNPNVIDTAQTYVGVSK----QDDVNQVIAGLEAQRKRQEDQAKQAAGIVAQ 569
>gi|443477184|ref|ZP_21067049.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
gi|443017746|gb|ELS32124.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
Length = 678
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 326/582 (56%), Gaps = 62/582 (10%)
Query: 6 VQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSE 64
+ A IP EE+ +LL QT A A+ + + L I++I + A +LS E
Sbjct: 29 IAAAHIPIPDRYEETLELLTQTKEAYALEERNAGVSLDGIQNITEAVFRAEKQGILSALE 88
Query: 65 ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCK 123
+ A+ TL N+ ++L A Y P L++L + ++E++I CID +
Sbjct: 89 LWAIATTLAGARNLRRQLDNAD---------YCPNLQILASDLRTYPDVEQEIYRCID-E 138
Query: 124 LLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+LDRASE L IR E R + M L +++++ A + + +IT+R R
Sbjct: 139 GGNVLDRASERLGEIRHELTSVRDQIMTKLQNIMQR------NASSLQEQIITQRNDRYV 192
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K+ + +P G+ + SS+G T F+EP V+ NN +L E A+ IL+ L+A
Sbjct: 193 LSVKSPQRDRVP-GVIHDTSSTGMTLFVEPNSIVQSNNRLRQLLKMEQAQIEIILTELSA 251
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
+I + +++ L+ V +IDLA ARA +A W+ G P H +I + ++HPL
Sbjct: 252 KITEIAEDLQRLLIIVTKIDLAVARARYAYWLGGNPP------HFLDQEAIVLRQLRHPL 305
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
L+ + + E E+ VP+D+ + + VVVITGP
Sbjct: 306 LVWQ---------------QKNEEGREV-------------VPVDVLISPQISVVVITGP 337
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKTA++KT GLA+LM+KAG+++PA+ +PWFDL+LADIGD QSL+QNLSTFSGHI
Sbjct: 338 NTGGKTATLKTFGLAALMAKAGMFIPAREPVEMPWFDLVLADIGDEQSLQQNLSTFSGHI 397
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
RI ILE +S +SLVL+DE+G+GTDPSEG A+AT++L+YL D LA+ TTH+ +L L
Sbjct: 398 RRIGRILEALSPQSLVLLDEVGAGTDPSEGSAIATALLEYLGDHTRLAIATTHFGELKAL 457
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K ++ +FENA+ EF +L PTYR+LWG G SNAL IA +G + I+ AQ +R
Sbjct: 458 KYQNPKFENASVEFDDASLAPTYRLLWGIPGRSNALAIAGRLGLPQDILAAAQ-----VR 512
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+++ L +RR+ + AA L E L++E
Sbjct: 513 VGIGSAEMNDVIAELEAQRREQTQKTEAAAHLLVETERLHKE 554
>gi|67923383|ref|ZP_00516863.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
gi|67854764|gb|EAM50043.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
Length = 806
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 215/601 (35%), Positives = 320/601 (53%), Gaps = 69/601 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPL--DLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P SL +S++LL QT + Q+ + I D+ L A +LS E+ +
Sbjct: 35 LPIPTSLADSKELLAQTQEIYGLEQNLEIRWTFEGITDVGDSLKRATLKGILSGKELLNI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
TL + + + + + EL P+L EL+ + ELE+ I CID + +
Sbjct: 95 ATTLAGMRRLRRIIDDCEEL---------PVLKELVADIRTYPELEKAIHHCID-EAGKV 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKASH 186
DRAS LE IR K E D + +K+ I Q GG I +P+IT+R R + +KA
Sbjct: 145 TDRASPKLESIRHNLK---EVRDRIYQKLQNIIQQKGGAIQEPVITQRGDRFVIPVKAGQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + S +G T+++EP V+ N + E EE IL LT +IA+
Sbjct: 202 KEQIP-GITHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEETILRQLTEKIAEVAE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ + +DLA ARA ++ W+ P + +I + + HPLL+
Sbjct: 261 DLEYLLAIAMVLDLATARARYSFWLGANPP-----RFIQDKETITLRQLHHPLLV----- 310
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P+ +PI+++++ + RV+ ITGPNTGGKT
Sbjct: 311 -WQEKHEQGSPV----------------------IPINVQIKPDIRVIAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA+LM+K GL++PAK +PWF+ ILADIGD QS+EQNLSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKVGLFVPAKEPVEIPWFEKILADIGDEQSIEQNLSTFSGHIRRIVRIL 407
Query: 427 ELVSR-------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
E + + SL+L+DE+G+GTDP+EG ALA ++L L D+ L + TTHY
Sbjct: 408 EALEQATLSPETLPHSPSPSLILLDEVGAGTDPAEGSALAMALLNRLADQARLTIATTHY 467
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK +D+RFENA+ EF T PTYR+LWG G SNAL+IA+ +G D +I A+
Sbjct: 468 GELKALKYEDSRFENASVEFDDRTFSPTYRLLWGIPGRSNALSIAQRLGLDVDVIDEAKT 527
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRY 593
+ L + +++ L +RRK E +A+ A L + Y E + A+ R
Sbjct: 528 RIGGLSQD-----VNDVIAGLEAQRRKQEEKAQEAQKLLQQTEKFYGEVTQKATALQERE 582
Query: 594 Q 594
Q
Sbjct: 583 Q 583
>gi|218441797|ref|YP_002380126.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7424]
gi|218174525|gb|ACK73258.1| MutS2 family protein [Cyanothece sp. PCC 7424]
Length = 803
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 224/606 (36%), Positives = 327/606 (53%), Gaps = 78/606 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G Q ++P K EES +LL QT + + L I DI L A G
Sbjct: 29 LGAIAAQYMRLPDTK--EESCQLLAQTEEVYDLENRLNTKLSFDGISDIGDALERADLGG 86
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
LLS E+ ++ TL V + + + E E+ P+L EL+ + E+E+ I
Sbjct: 87 LLSGKELLSIATTLAGVRRLRRIIEEQEEI---------PVLKELVADVRTYPEIEQDIH 137
Query: 118 FCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLI 171
CI D K + DRAS L IR + R+R L ++++ Q+G I + +I
Sbjct: 138 RCIEEDGK---VSDRASPRLREIRGQIKVVRERIYRKLQDIMQR------QSGAIQESVI 188
Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET 231
T+R R + +KA K + GI + SS+GAT ++EP VE N + E EE
Sbjct: 189 TQRGDRFVLPVKAPQKDQI-SGIIHDSSSTGATLYIEPHSVVEQGNQLRQHHRQEQIEEE 247
Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL LT +IA+ + +++YL+ +DLA AR+ ++ W+ P + I
Sbjct: 248 VILRGLTQQIAQVKEDLEYLLAVATTLDLAVARSRYSWWLQANPP-----RFIDSTEPIT 302
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+ ++HPLL+ +N E V VPI+++V+ +
Sbjct: 303 LRQLRHPLLVWQ-------------------QNHEQGVEV---------VPINVQVDPKI 334
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
RVV ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK LPWF+ ILADIGD QSL+Q+
Sbjct: 335 RVVAITGPNTGGKTVTLKTIGLATLMAKAGIFIPAKVPVELPWFEEILADIGDEQSLQQS 394
Query: 412 LSTFSGHISRIVDILELVS----------RESLVLIDEIGSGTDPSEGVALATSILQYLR 461
LSTFSGHI R++ I+E ++ SLVL+DE+G+GTDP+EG ALAT++L+YL
Sbjct: 395 LSTFSGHIRRMIRIIEALNGSSPEETKPPASSLVLLDEVGAGTDPAEGSALATALLKYLA 454
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
D+ L + TTHY +L LK +D RFENA+ EF+ +TL PTYR+LWG G SNAL IA +
Sbjct: 455 DQAQLTIATTHYGELKALKYQDERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRL 514
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
G +II+ A+ V + Q + L E+RR+ E +A+ A+ L E Y E
Sbjct: 515 GLRPEIIEEARTRVGGFSEDINQ-----VIAGLEEQRREQEQKAKEASKLLQETERFYAE 569
Query: 582 DSTSAS 587
S A+
Sbjct: 570 VSEKAN 575
>gi|428215373|ref|YP_007088517.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
gi|428003754|gb|AFY84597.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
Length = 846
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 314/584 (53%), Gaps = 60/584 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP +LE++ LL QT + L I DI L A +LS E+ A
Sbjct: 74 QIP--DTLEQTLVLLAQTQEVYELENQGLTTLSFDGIHDIGDSLERADLHGILSAEELLA 131
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + + +L S L L+ + E+E++I CID + +
Sbjct: 132 IATTLSGARQLRRTIDDHPQL--------SVLNRLVADLRTYPEIEQEIHRCIDDRAQVA 183
Query: 128 LDRASEDLELIRAERKRNM-----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR +R+R + + L S+L++ + + + LITKR R + +
Sbjct: 184 -DRASTRLGEIR-QRQRTVRDQIYQKLQSILQR------HSNAVQEQLITKRSDRFVIPV 235
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K+ K +P GI + S SGAT ++EP VE NN L E AEE AIL LTA+I
Sbjct: 236 KSPQKDAIP-GIVHDSSMSGATLYVEPHSVVELNNKARVLLREEKAEEEAILRALTAKIT 294
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ +++ L+ V +DLA ARA ++ W++ P ++ +I + ++HPLL+
Sbjct: 295 EVVEDLERLLAIVTILDLATARARYSYWLNANPPTFINRGEEG--QTITLRQLRHPLLIW 352
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
A VPID+ V+ + +VV ITGPNTG
Sbjct: 353 QQQHEQGNAV----------------------------VPIDLIVQPQIKVVAITGPNTG 384
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGL LM+K GL++PAK LPWFD +LADIGD QSLEQ+LSTFSGHI RI
Sbjct: 385 GKTVTLKTLGLGILMAKVGLFIPAKVPVELPWFDFVLADIGDEQSLEQSLSTFSGHIRRI 444
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
IL + +SLVL+DE+G+GTDP+EG ALA ++L +L D L + TTHY +L LK +
Sbjct: 445 SRILGSCTPDSLVLLDEVGAGTDPTEGSALAIALLHHLADCSQLTIATTHYGELKALKYE 504
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D RFENA+ EF TL+PTYR+LWG G SNAL IA+ +G +I+ +A LV P
Sbjct: 505 DDRFENASVEFDEATLQPTYRLLWGIPGRSNALTIARRLGLTSEIVDQAANLVA---PTG 561
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSA 586
Q + L +R++ E++A+ A L E LYRE + A
Sbjct: 562 TQD-VDRVIAGLENQRKQQETKAQEAGQLLGETERLYREVADKA 604
>gi|254425115|ref|ZP_05038833.1| MutS2 family protein [Synechococcus sp. PCC 7335]
gi|196192604|gb|EDX87568.1| MutS2 family protein [Synechococcus sp. PCC 7335]
Length = 798
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 219/625 (35%), Positives = 334/625 (53%), Gaps = 74/625 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
+G+ Q+ IP ++ ES+ LL+QT+ A + S L I DI L + +
Sbjct: 27 IGNVAAQRLLIPISQA--ESEALLSQTTEATQLESTSAGLQFGGIRDIGVALERSRLQGI 84
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGF 118
LS E+ + TL + +++ +L P+L+ L+++ ELE++I
Sbjct: 85 LSGDELLDIATTLAGARRLRRQIDAQEDL---------PVLQALVEDLRTFPELEQEIHR 135
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CID + + DRAS L +R + K + + S L+++ + Q G + + LIT+R R
Sbjct: 136 CIDDRGQVA-DRASTKLGNVRQQLKVIRDRIYSKLQRIIQR--QGGALQEALITQRNDRF 192
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +KA+ K +P GI +VS+SG+T ++EP V+ N L E E AI +LT
Sbjct: 193 VLPVKAAQKDAVP-GIVHDVSTSGSTLYVEPHSIVDNGNKRRALRKEEEVESEAIRQMLT 251
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
++A++ ++++LM ++++DLA ARA + WM+G P +Q ++ + HP
Sbjct: 252 YQVAEAFPDLEHLMITIVKLDLAAARARYGLWMEGNAPRFVNQEQITLRQ------LTHP 305
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LLL K D VP D+ + E RVV ITG
Sbjct: 306 LLLWQQ----------------------------EKEQKDKVVPTDLVMRPELRVVAITG 337
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT ++KTLGL +LM+K G+++PAK LPWFD +LADIGD QS+EQ+LSTFSGH
Sbjct: 338 PNTGGKTVTLKTLGLTALMAKVGMFIPAKEPVELPWFDSVLADIGDEQSIEQSLSTFSGH 397
Query: 419 ISRIVDILELVSR--------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
+ RI IL+ + SLVL+DE+G+GTDPSEG ALA ++L++L + L V T
Sbjct: 398 VKRIGRILDTIDELKGENEVANSLVLLDEVGAGTDPSEGSALAIALLKHLANNTRLTVAT 457
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
THY +L LK +D RFENA+ EF E L PTYR+LWG G SNAL+IA+ +G ++++
Sbjct: 458 THYGELKSLKYEDERFENASVEFDDEKLAPTYRLLWGIPGRSNALSIARRLGLKHSVLEQ 517
Query: 531 AQ-----------KLVERLRPERQ-QHRKSELYQSLMEERRKL--ESQARTAASLHAEIM 576
A+ ++E L +RQ Q +++ + L+ K E +AR A SL
Sbjct: 518 AKAQMGGTNDNVNTVIEGLEAQRQKQEKRAAEAEKLVARAEKFYKEVEAR-AQSLRDREQ 576
Query: 577 DLYREDSTSASISVYRYQFAVTSTL 601
L R+ S S+ + V +
Sbjct: 577 KLKRQQEKSVETSLLHARAEVAKVI 601
>gi|126657853|ref|ZP_01729006.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
gi|126620793|gb|EAZ91509.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
Length = 818
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 319/612 (52%), Gaps = 78/612 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLD--LSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P SLEES++LL QT + Q+ + I D+ L A LS E+ +
Sbjct: 35 LPIPTSLEESKELLEQTKEIYRLEQNLEIKWTFEGITDVGDSLKRATLKGNLSGKELLNI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL + + + + + EL L EL+ + ELE+ I CID + +
Sbjct: 95 ATTLAGMRRLRRIIEDYEEL--------PTLTELVADIRTYPELEKTIHHCID-EAGKVA 145
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
DRAS L IR K N + + L+ + Q + G I + +IT+R R + +KA+ K
Sbjct: 146 DRASTKLGEIRHNLKENRDRIYQKLQNIMQQ--KGGAIQETVITQRGDRFVLPVKAAQKE 203
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S +G T+++EP V+ N + E EE AIL L+ ++A+ ++
Sbjct: 204 QIP-GIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEEAILRQLSEQVAEVAEDL 262
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+YL+ +DLA AR+ ++ W+ G P + +I + + HPLL+
Sbjct: 263 EYLLAIATILDLATARSRYSFWLGGNAP-----RFIEDKETITLRQLHHPLLV------W 311
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P+ VPI++++ E RV+ ITGPNTGGKT ++
Sbjct: 312 QERHEQGSPV----------------------VPINVQINPEIRVIAITGPNTGGKTVTL 349
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GLA+LM+K GL++PAK LPWF ILADIGD QS+EQNLSTFSGHI RIV ILE
Sbjct: 350 KTVGLAALMAKVGLFVPAKEPVELPWFKQILADIGDEQSIEQNLSTFSGHIRRIVRILEA 409
Query: 429 V-----SRE---------------------SLVLIDEIGSGTDPSEGVALATSILQYLRD 462
+ SRE SL+L+DE+G+GTDP+EG ALA ++L +L D
Sbjct: 410 LDQGTESREQEAGIRDQGSVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLAD 469
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L + TTHY +L LK +D+RFENA+ EF +L PTYR+LWG G SNAL+IA+ +G
Sbjct: 470 HARLTIATTHYGELKALKYEDSRFENASVEFDDRSLSPTYRLLWGIPGRSNALSIAQRLG 529
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRED 582
D +I++ A+ + L + +++ L +RR+ E +A A L E Y E
Sbjct: 530 LDHEIVEEAKTRIGGLSQD-----VNDVIAGLEAQRREQEEKALEAQKLLQETEKFYTEV 584
Query: 583 STSASISVYRYQ 594
+ A+ R Q
Sbjct: 585 TEKATALQQREQ 596
>gi|22300014|ref|NP_683261.1| recombination and DNA strand exchange inhibitor protein
[Thermosynechococcus elongatus BP-1]
gi|22296199|dbj|BAC10023.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1]
Length = 811
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 317/579 (54%), Gaps = 56/579 (9%)
Query: 13 FGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
G + SQ LL QT+ +A+ + LD S + DI L L +E+ A+
Sbjct: 63 LGGTQAASQVLLAQTAEVIALETVHQVRLDFSQVTDIEPALARLDHQGCLQGTELLAIAH 122
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
L +++ E +L S L +L+ E+ ++I CI + + DR
Sbjct: 123 LLSTARQQRRQIEEHGQL--------SELQQLVAGVRTYPEVTQEIYRCITDQGQVS-DR 173
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS EL + +++ + +AG I +P++T+RR R + +KA+HK +
Sbjct: 174 ASP--ELAQIRQQQRQCRAQIQQQLQQILQQRAGAIQEPVVTQRRDRYVLAVKATHKDQI 231
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI ++S+SGAT ++EP+ ++ N +L++ E E AI L+ ++A ++ Y
Sbjct: 232 V-GIVHDLSASGATLYIEPQETIDLQNRLQQLAHQEAEVERAICQALSDQLATISDDLWY 290
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+D + +D+A ARA ++ W+ G P SQ+ ++++ ++HPLL+
Sbjct: 291 LLDVLTTLDVAVARARYSLWLQGNPPQFVSQTR------LHLKALRHPLLVWQE------ 338
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P+ VPIDI+++ T+VV ITGPNTGGKTA++KT
Sbjct: 339 HHEQGQPV----------------------VPIDIELQPATKVVTITGPNTGGKTATLKT 376
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL---E 427
LGLA+LM+KAGLY+PA LPWF I ADIGD QSL QNLSTFS HI I DIL E
Sbjct: 377 LGLAALMAKAGLYVPAAAPVELPWFTGIWADIGDEQSLTQNLSTFSSHICNIRDILTELE 436
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ +LVL+DE+G+GTDPSEG ALA ++L+YL + L TTHY +L LK +D+RFE
Sbjct: 437 VTGGNTLVLLDEVGAGTDPSEGTALAIALLRYLAEHASLTFATTHYGELKALKYQDSRFE 496
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETL PTYR+LWG G SNAL IA+ +G I++ A+ L+ + +
Sbjct: 497 NASVEFDEETLAPTYRLLWGIPGQSNALAIAQRLGLYPSIVEEAKALL-----SKDSNSV 551
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSA 586
+E+ L+ +R+ E++ AA+L + LY+E +T A
Sbjct: 552 NEMIMGLVAQRQAQEAKTTAAATLLRDTEALYQEIATRA 590
>gi|434391179|ref|YP_007126126.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
gi|428263020|gb|AFZ28966.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
Length = 804
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 214/601 (35%), Positives = 323/601 (53%), Gaps = 69/601 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
+G + QIP +S ++S+ LL QT A + S L I+DI L
Sbjct: 27 LGATAARNLQIP--QSQKQSEALLAQTQEAYQLENSLTGGLSFDGIQDIGDALTRVQRQG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+L+ E+ A+ TL + + + ++ P+L L+++ E+E++I
Sbjct: 85 ILTGEELLAIATTLAGTRQLRRAIDNQPDV---------PVLSALVEDIRTYPEIEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
CID + + DRAS L IR+ R + + L ++L++ QA + + LITK
Sbjct: 136 RCIDERGQVS-DRASTTLSNIRSSLRQIRSQITQKLQNILQR------QANAVQEQLITK 188
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +KA K +P GI + S+SGAT ++EP V N +L+ E AEETAI
Sbjct: 189 RGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLGNQLRQLTVKEQAEETAI 247
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L+ +IA ++++L+ +DLA ARA ++ W+ P + +I +
Sbjct: 248 RRQLSEQIAAVTPDLEHLLSVATILDLACARARYSYWLKANPPRFIQRGE---GETITLR 304
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+ HPLL+ A VP+D+ ++ + RV
Sbjct: 305 QLHHPLLVWQFAHEQGTAV----------------------------VPVDLVIKPQIRV 336
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LS
Sbjct: 337 VTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLS 396
Query: 414 TFSGHI---SRIVDILE----LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
TFSGHI SRI+D L L SLVL+DE+G+GTDP+EG ALA ++LQYL D L
Sbjct: 397 TFSGHIRRISRIIDALSNTQALTPHSSLVLLDEVGAGTDPAEGSALAIALLQYLADHTQL 456
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
++ TTH+ +L LK +D RFENA+ EF E+L PTYR+LWG G SNAL IA+ +G + +
Sbjct: 457 SIATTHFGELKALKYQDERFENASVEFDEESLSPTYRLLWGIPGRSNALTIARRLGLNAE 516
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSA 586
++++A+ + + Q + L +RR E++A A L ++ LY E S A
Sbjct: 517 VVEQAKTKIGGATEDVNQ-----VIAGLEAQRRLQETKAAEAEQLLQQVQRLYTEVSQKA 571
Query: 587 S 587
+
Sbjct: 572 A 572
>gi|443318566|ref|ZP_21047815.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
gi|442781831|gb|ELR91922.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
Length = 786
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 212/530 (40%), Positives = 298/530 (56%), Gaps = 50/530 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+P + ES+ LL QT A + P L + I+DI L AV LL E+ A+
Sbjct: 34 QLPLPTTQAESEGLLAQTREATQLETRPPGLKFAGIQDIGESLERAVRQGLLGGEELLAI 93
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
T+ N ++L A +DG Q P+L+ L+ + ELE+ I CID + +
Sbjct: 94 ATTV----NGARQLRRA--IDG---QDAVPVLQGLVADLRTYPELEQSIHHCIDDRAQVT 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L +R + K+ + + L+++ + Q+G I + +IT+R R + +KA K
Sbjct: 145 -DRASPKLGGLRTQIKQCRSEIYAKLQRILQR--QSGAIQEAVITQRGDRFVIPVKAPQK 201
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP VE N +L E EE AI LTA++A +
Sbjct: 202 DAIP-GIVHDASTSGATLYVEPHSIVEMGNRLRQLQRQEKTEEEAICRALTAQVAAVATD 260
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +DLA ARA + W+ G P ++ + ++HPLL
Sbjct: 261 LERLLAIVTALDLAAARARYGLWLQGNAP-----QFITPGEQTTLRHLRHPLLW------ 309
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + +V VPID+ V RVV ITGPNTGGKT +
Sbjct: 310 ----WQHHHEAGPEV------------------VPIDVVVNPRLRVVAITGPNTGGKTVT 347
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGLA+LM+KAG+Y+PAK LPWFD +LADIGD QS+EQ+LSTFSGHI RI +L
Sbjct: 348 LKTLGLAALMAKAGMYVPAKEPVELPWFDQVLADIGDEQSIEQSLSTFSGHIKRISRVLA 407
Query: 428 LVSRE--SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ E +LVL+DE+G+GTDPSEG ALA ++L+YL D+ V TTHY +L LK +D R
Sbjct: 408 ALETEGNALVLLDEVGAGTDPSEGSALAIALLRYLADQARFTVATTHYGELKALKYQDDR 467
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
FENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ +AQ V
Sbjct: 468 FENASVEFDENTLSPTYRLLWGIPGRSNALTIARRLGLAAEIVDQAQNYV 517
>gi|428776360|ref|YP_007168147.1| MutS2 family protein [Halothece sp. PCC 7418]
gi|428690639|gb|AFZ43933.1| MutS2 family protein [Halothece sp. PCC 7418]
Length = 812
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 197/515 (38%), Positives = 287/515 (55%), Gaps = 60/515 (11%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D L+ L EL+ ELE++I C+D K + +RAS L IR K + +
Sbjct: 109 DELEDSPRLKELISQIRTYPELEKEINRCLDDKGKVT-ERASPKLGEIRQNLKERRDRIY 167
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
L+ + Q Q+G I +P+IT+R R + +KA HK + GI + S SGAT ++EP
Sbjct: 168 QKLQNIMQQ--QSGAIQEPVITQRGERFVLPVKAGHKESI-RGIVHDSSGSGATLYIEPN 224
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
VE N + + E EE IL LT E+A+ + +++ L+ ++DLA AR+ ++ W
Sbjct: 225 SIVELGNQQRQYLRQEKREEERILQALTEEVAEVKEDLELLLAIATKLDLATARSRYSLW 284
Query: 271 MDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
++ P + S S I + ++HPLL+ P+
Sbjct: 285 LEANPPQFVESNSR----EPITLRRLRHPLLV------WQHHHEQGTPV----------- 323
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
VPID++++ ETRVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK
Sbjct: 324 -----------VPIDVQIDPETRVVAITGPNTGGKTVTLKTVGLAALMAKVGLFIPAKEP 372
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS------------------R 431
+PWF+ +LADIGD QS+EQ+LSTFSGHI RI I++ + +
Sbjct: 373 VEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRITRIIDALHPSSIDHPEANEDADGETIK 432
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SLVL+DE+G+GTDP+EG A+A ++LQYL RV L + TTHY +L LK +D RFENA+
Sbjct: 433 LSLVLLDEVGAGTDPAEGSAIAIALLQYLAARVRLTIATTHYGELKALKYQDERFENASV 492
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF ETL PTYR+LWG G SNAL IA+ +G D +I+ A+ + + Q +
Sbjct: 493 EFDDETLSPTYRLLWGIPGRSNALTIARRLGLDPEILDLAKNKMGGYSEDINQ-----VI 547
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREDSTSA 586
L ++RR+ E +AR A L + Y+E S+ A
Sbjct: 548 SGLEKQRREQEEKAREARQLLEQAEKFYQEVSSRA 582
>gi|443320530|ref|ZP_21049624.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
gi|442789744|gb|ELR99383.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
Length = 793
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 325/588 (55%), Gaps = 59/588 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAG-ILNSAVSGQLLSPSEICAVRRTL 72
+L S++LL QT + + S I+DI +L + + G LL +E+ + T+
Sbjct: 40 NLATSRELLTQTQEIWQLQEHFSTAWSFQGIKDIRPFLLRAQLKGTLLG-TELLDIASTV 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
V + K + E +E +P+LE L+ ELE++I +CID + + DRA
Sbjct: 99 AGVRKLRKIIEEQSE---------TPVLENLVATVRTYPELEQEIYYCID-EGGEVEDRA 148
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S L IR++ K + +L+ + + Q + + LIT+R R + +K HK +P
Sbjct: 149 SLKLAEIRSKLKEFRNKIQKILQGIIQR--QGNALQETLITQRSDRFVLPVKTPHKEQIP 206
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + SS+G+T ++EP+ ++ N +L E AE +L LT ++A +++ +
Sbjct: 207 -GIVHDSSSTGSTLYVEPQAIIQLGNQLKQLLRREQAEIEIVLKALTEKVAAITSDLEQV 265
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ +DLA ARA ++ W++ P L S + +++I + +KHPLL+ A
Sbjct: 266 VLVATTLDLATARANYSYWLNAHPPQLIS---LDQEATITLRELKHPLLIWQEKHEQGPA 322
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VPI+++++ + RVV ITGPNTGGKT ++KT+
Sbjct: 323 V----------------------------VPINVRIQPDIRVVAITGPNTGGKTVTLKTI 354
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS- 430
G+A+LM+K GL++PA + +PWF+ ILADIGD QSLEQ+LSTFSGHI RI+ IL+ +
Sbjct: 355 GIAALMAKVGLFIPAADPVEIPWFEKILADIGDEQSLEQSLSTFSGHIKRIIRILDAIGR 414
Query: 431 ----RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
R +LVL+DE+G+GTDP+EG ALA ++LQ+L D L + TTHY +L LK +D+RF
Sbjct: 415 PEDLRSALVLLDEVGAGTDPTEGTALAIALLQHLADSAWLTIATTHYGELKALKYQDSRF 474
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G D +I+++A+ V E Q
Sbjct: 475 ENASVEFDEATLAPTYRLLWGIPGRSNALMIARRLGLDLEIVEQAKSKVGGYAEEINQ-- 532
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQ 594
+ L +R++ E++A+ A L E Y E S A R Q
Sbjct: 533 ---VIAGLEAQRKEQENKAQAANQLLQETERFYGEISAKAKALQQREQ 577
>gi|86607201|ref|YP_475964.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-3-3Ab]
gi|86555743|gb|ABD00701.1| MutS2 family protein [Synechococcus sp. JA-3-3Ab]
Length = 799
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 325/573 (56%), Gaps = 59/573 (10%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+S ES+ L+QT A+ + SQP + L I ++ L A G +LS E+ + TL
Sbjct: 57 RSRAESEVCLDQTEEAIRLDCSQPGGISLDGIHNLLPALERAERGGILSGEELVQIATTL 116
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + ++L +A E R L E + N ELE++I C+D + + D AS
Sbjct: 117 GAARRL-RRLIDADE-------RLPRLQEWVSNLRTYPELEQEIFRCLD-EHGEVRDSAS 167
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L +R + ++ + L++V +Q QA + LI +R+ R + +KA+H+ L+
Sbjct: 168 AALADLRRQHRQYRSQIQERLQQVMSQHPQA--LQDTLIGQRQGRFVLMVKATHRDLI-R 224
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT ++EP VE N +R + ++I AEE IL+ L+A++ ++++L
Sbjct: 225 GIVHDSSASGATLYVEPYAVVELGN-RLRETQAQIQAEEERILAALSAQVGSVAEDLEHL 283
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ +++A ARA ++ W+ G P + + + +HPLLL S
Sbjct: 284 QAVMVGLEVALARARYSLWLGGNRPQF-------VPAGLRLRQARHPLLLWQS------- 329
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+ + + E+ +PID + R VVITGPNTGGKT ++KTL
Sbjct: 330 -------REEGKGPEV-------------IPIDFTLSESIRAVVITGPNTGGKTVALKTL 369
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL LM+KAG++LPA++ P+LPWFD + ADIGD QSL+Q+LSTFSGHI RI I++ +
Sbjct: 370 GLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQSLSTFSGHIRRISRIVQALQS 429
Query: 432 E---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
E +LVL+DE+G+GTDPSEG ALA +L+YL ++ L + TTHY +L LK + FEN
Sbjct: 430 EPAPALVLLDEVGAGTDPSEGAALAAGLLEYLAEKALLTLATTHYGELKALKYQHPGFEN 489
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR+LWG G SNAL IA+ + + +I++RAQ + L+ E Q
Sbjct: 490 ASVEFDEATLAPTYRLLWGIPGRSNALAIARRLHLEPEILRRAQ---QHLQGESQ---VD 543
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
++ L +R +LE +A SLH E+ LYR+
Sbjct: 544 KVIAGLEAQRAQLEERAAQVGSLHQELETLYRQ 576
>gi|186680652|ref|YP_001863848.1| recombination and DNA strand exchange inhibitor protein [Nostoc
punctiforme PCC 73102]
gi|186463104|gb|ACC78905.1| MutS2 family protein [Nostoc punctiforme PCC 73102]
Length = 805
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 322/607 (53%), Gaps = 73/607 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G + +IP S +S++LL QT + + L I+DI L A
Sbjct: 27 LGATAARNLKIP--DSQTQSEQLLEQTKEVYQLESRLTTGLSFEGIQDIGDSLERAERSG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
+L+ E+ A+ TL ++ + + +L P+L EL+ + ELE++I
Sbjct: 85 VLAGDELLAIATTLAGARSLRRVIDNQEDL---------PILTELVADLRTYPELEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRR 175
CID + + DRAS+ L IR + +R L S + + I QA G + + LIT+R
Sbjct: 136 RCIDERAQVT-DRASQKLGEIRTDLRR----LRSQITQKLQNILQAKSGAVQEQLITQRS 190
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +KA K +P GI + S+SGAT ++EP V N ++ E AEE AI
Sbjct: 191 DRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLGNQLRQIIRKEQAEEEAIRR 249
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
+LT ++A + +++ L+ +DLA AR+ ++ W+ G P Q S +I + +
Sbjct: 250 ILTEQVAAVKPDLERLLAIATTLDLATARSRYSYWL-GANPPRFIQRQDS--ETITLRNL 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPLL+ P+ VP+D+ + RVV
Sbjct: 307 RHPLLV------WQQQHEQGQPV----------------------VPVDLLINPLIRVVT 338
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTF
Sbjct: 339 ITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTF 398
Query: 416 SGHISRIVDILE---------------LVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
SGHI RI ILE + + +SLVL+DE+G+GTDP EG ALA ++LQYL
Sbjct: 399 SGHIRRISRILEALGNGESGSEDGEKEMPNPQSLVLLDEVGAGTDPVEGSALAIALLQYL 458
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+ L + TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA
Sbjct: 459 ANHAQLTIATTHFGELKALKYEDERFENASVEFDESTLSPTYRLLWGIPGRSNALTIALR 518
Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+G +++Q+A+ V E Q + L +RR+ E++A A SL + LY+
Sbjct: 519 LGLKPEVVQQAKTQVGEATDEVNQ-----VIAGLEAQRRRQETKAAEAQSLLQQAERLYK 573
Query: 581 EDSTSAS 587
E S A+
Sbjct: 574 EVSAKAA 580
>gi|428770493|ref|YP_007162283.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
gi|428684772|gb|AFZ54239.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
Length = 803
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 326/588 (55%), Gaps = 61/588 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
+G Q IP +L ++ LL QT + + + S I D+ + A G
Sbjct: 27 LGAIASQNLTIP--STLAHTRLLLAQTQEVVTLETDINCNWSFQGIHDVGDGIERAKMGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+LS E+ + TL V + + + + +L L EL+ N ELE++I +
Sbjct: 85 MLSGEELLNLATTLAGVRKLRRIIDDKNDL--------ITLQELVANIRTFPELEQEIHY 136
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRS 176
CID + I +RAS L AE ++ +++L S +++ I Q G + + +IT+R
Sbjct: 137 CIDDRGEIT-ERASPQL----AEIRQKIKSLRSKIQQTLQGIIQRYGNALQELVITQRGD 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +KA H ++ GI + SS+G+T ++EPK VE N N E EE IL
Sbjct: 192 RFVLPVKADHSGII-TGIVHDTSSTGSTLYVEPKAVVELGNKLQTSRNQEKREEEKILRA 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF--DSSINIEG 294
L+ ++A++ ++++ L+ +DLA ARA ++ W+D P V F SI +
Sbjct: 251 LSEKVAENWQDLEELLAVATTLDLATARARYSLWLDAYPP-----EFVDFADGESITLRQ 305
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
++HPLL+ E S++ +PID+++ ETRVV
Sbjct: 306 VRHPLLVWQERHE---------------EGSQV-------------IPIDVRISPETRVV 337
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++KT+G+ +LM+K GL++PAK+ R+PWF+ +LADIGD QSL+Q+LST
Sbjct: 338 AITGPNTGGKTVTLKTIGMVALMAKVGLFIPAKSPARIPWFNNVLADIGDEQSLQQSLST 397
Query: 415 FSGHISRIVDIL-ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
FSGHI RIV IL E+ SLVL+DE+G+GTDP+EG A+A SIL+YL L + TTHY
Sbjct: 398 FSGHIRRIVRILDEIKENNSLVLLDEVGAGTDPNEGTAIAISILKYLASNNLLTIATTHY 457
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK D+RFENA+ EF +L+PTYR+LWG G SNA+ IA+ +G + I+ A++
Sbjct: 458 GELKSLKYSDSRFENASVEFDDVSLQPTYRLLWGIPGRSNAITIAQRLGLNDDIVAEAKE 517
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
LV + +EL +L ++R++ E + + A L + Y++
Sbjct: 518 LVGGFSAD-----VNELISALEKQRKEQEDKHQQAQDLLTKTELFYQQ 560
>gi|172036803|ref|YP_001803304.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. ATCC 51142]
gi|354554613|ref|ZP_08973917.1| MutS2 protein [Cyanothece sp. ATCC 51472]
gi|171698257|gb|ACB51238.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
gi|353553422|gb|EHC22814.1| MutS2 protein [Cyanothece sp. ATCC 51472]
Length = 817
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 213/612 (34%), Positives = 316/612 (51%), Gaps = 79/612 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLD--LSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P SL+ES++LL QT + Q+ + I D+ L A LS E+ +
Sbjct: 35 LPIPTSLQESKELLAQTQEIYGLEQNLEIKWTFEGITDVGDSLTRATLKGNLSGQELLNI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
TL + + + + + +L P+L +L+ + ELE+ I CID + +
Sbjct: 95 ATTLAGMRRLRRIIDDCEDL---------PVLTDLVADIRTYPELEKAIHHCID-EAGKV 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR K + + L+ + Q + G I + +IT+R R + +KA K
Sbjct: 145 ADRASPKLGEIRHNLKEIRDRIYEKLQNIMQQ--KGGAIQETVITQRGDRFVLPVKAGQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S +G T+++EP V+ N + E EE AIL LT ++A+ +
Sbjct: 203 EQIP-GIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEEAILRSLTEQVAEVAED 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++YL+ +DLA ARA ++ W+ G P + +I + + HPLL+
Sbjct: 262 LEYLLAIATVLDLATARARYSFWLGGNAP-----RFIEDTETITLRQLHHPLLV------ 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P+ VPI++++ + RV+ ITGPNTGGKT +
Sbjct: 311 WQERHEQGSPV----------------------VPINVQINPDIRVIAITGPNTGGKTVT 348
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA+LM+K GL++PAK LPWF+ ILADIGD QS+EQNLSTFSGHI RIV ILE
Sbjct: 349 LKTVGLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSIEQNLSTFSGHIRRIVRILE 408
Query: 428 LVS-------------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
+ SL+L+DE+G+GTDP+EG ALA ++L +L D
Sbjct: 409 ALEGTGDPPLTNGGGEQKTVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLAD 468
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L + TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNAL+IA+ +G
Sbjct: 469 HAQLTIATTHYGELKALKYEDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALSIAQRLG 528
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRED 582
D II A+ + L + +++ L +RR+ E +A+ A L E Y E
Sbjct: 529 LDVDIIDEAKTRIGGLSQD-----VNDVIAGLEAQRREQEEKAQEAQKLLQETEKFYTEV 583
Query: 583 STSASISVYRYQ 594
S A+ R Q
Sbjct: 584 SEKATALQQREQ 595
>gi|284929397|ref|YP_003421919.1| MutS2 family protein [cyanobacterium UCYN-A]
gi|284809841|gb|ADB95538.1| MutS2 family protein [cyanobacterium UCYN-A]
Length = 810
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 324/616 (52%), Gaps = 76/616 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDL--STIEDIAGILNSAVSGQ 58
MG Q IP + L ESQ+LL+QT + Q + L I DI ++ A G
Sbjct: 27 MGITAAQNPDIP--ELLTESQELLSQTEEVYYLEQDPKIKLIFEGIVDIRDVVKIAALGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
LS ++ + TL V + K + +L +L++ L+ N ELE+ I +
Sbjct: 85 YLSGKDLLGIAITLDKVRRLRKIVNSYEKLPLFNLKK------LVNNIKTYPELEQTIRY 138
Query: 119 CIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
C+D I + AS L L+R R + L S++ K +AG I + LIT+R
Sbjct: 139 CVDENGDIT-EHASSKLSKIRLLLRELRNEIYQKLQSIINK------KAGAIQESLITQR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
+R + +K K +P GI + S++G T ++EP V+ N + E EE IL
Sbjct: 192 NNRFVIPVKTLQKDQIP-GIVHDTSNTGMTVYIEPSYIVDIGNKYCQYLRQETIEEIVIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
LT +IA+ +KYL++ + ++DLA ARA ++ W+ G P + +I +
Sbjct: 251 RQLTEKIAEVAESLKYLVEAIQKLDLATARARYSLWLGGNIP-----QFIEEGETIILRK 305
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+ HPLL+ + +G+ VPIDI++ + VV
Sbjct: 306 LYHPLLIWQQKK--------------------------EQGVQ--VVPIDIQINSKINVV 337
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++KTLGLA+LM+K GL++PA + +LPWF +LADIGD QS+ QNLST
Sbjct: 338 SITGPNTGGKTVTLKTLGLAALMAKVGLFIPAVSPVKLPWFKNVLADIGDEQSITQNLST 397
Query: 415 FSGHISRIVDILELVSR----------------ESLVLIDEIGSGTDPSEGVALATSILQ 458
FS HI RI+ IL+ VS SLVL+DE+G+GTDP+EG ALA S+L
Sbjct: 398 FSSHIRRIILILKAVSNSSKSNSSKILNKFKNCSSLVLLDEVGAGTDPTEGSALAISLLS 457
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+L + L + TTHY ++ LK +D+RFENA+ EF+ +T P+YR+LWG G SNA++IA
Sbjct: 458 HLANHALLTIATTHYGEIKALKYRDSRFENASVEFNDQTFSPSYRLLWGIPGRSNAISIA 517
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+++G D I+Q A+ +V Q +++ L E+R K E +A A L + +
Sbjct: 518 QNLGLDLNILQAARNIV-----GEQSKDVNDIILGLEEQRNKQELKANEAQELLKQAKNF 572
Query: 579 YREDSTSASISVYRYQ 594
Y E S A I R Q
Sbjct: 573 YTEVSDKAVILKEREQ 588
>gi|428773368|ref|YP_007165156.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
gi|428687647|gb|AFZ47507.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
Length = 822
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 213/600 (35%), Positives = 318/600 (53%), Gaps = 79/600 (13%)
Query: 15 KSLEESQKLLNQTSAALAMMQS-QP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
K+L E+QKLL QT + S P S I DI L A G +L E+ + TL
Sbjct: 39 KTLSETQKLLEQTKEVYHIETSLNPNWSFSGIHDIGDALERAKLGGILKGEELLNLATTL 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
V +KL E L+ L EL+++ ELE++I +CID + I +RAS
Sbjct: 99 AGV----RKLRRVIE----DLEDSPTLKELVESLRTFPELEQEIHYCIDDRGEIT-ERAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
L IR + ++ L S +++ I Q G + +P++T+R R + +KASH +
Sbjct: 150 PQLGEIR----QKIKGLRSKIQQTLQNIIQRNGNALQEPVVTQRGDRFVLPVKASHSGQI 205
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + S++G+T + EPK ++ N E EE IL LT ++A+ E++
Sbjct: 206 -SGIVHDTSTTGSTLYTEPKSIIDLGNRLQTSRGQEKREEEKILRTLTEKVAEVWEELEQ 264
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI--EGIKHPLLLGSSLRSL 308
L+ +DLA A+A ++ W++G P V F S NI ++HPLL+ +
Sbjct: 265 LLAIATALDLATAKARYSMWLEGNPP-----QFVDFQSQENITLRQLRHPLLIWQQKKEE 319
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
S A VPID+ ++ +TRVV ITGPNTGGKT ++
Sbjct: 320 SGAV----------------------------VPIDVLIKSDTRVVAITGPNTGGKTVTL 351
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+G+ +LM+K G+++PAK+ +PWFD +LADIGD QSLEQNLSTFSGHI RI+ I++
Sbjct: 352 KTIGITALMAKVGIFIPAKDPVLIPWFDQVLADIGDEQSLEQNLSTFSGHIRRIIRIMDA 411
Query: 429 VS---------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
++ SLVL+DE+G+GTDP+EG A+A +IL++L + L
Sbjct: 412 LNGSTPIQNPDDDSPTVETQHGLSNSLVLLDEVGAGTDPTEGSAIAIAILKHLAEHNLLT 471
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY +L LK D+RFENA+ EF +L+PTYR+LWG G SNA+ IA+ +G +
Sbjct: 472 IATTHYGELKTLKYNDSRFENASVEFDDVSLQPTYRVLWGIPGRSNAIIIAQRLGLPSDV 531
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
I +Q+L + Q L L +RR+ E + + A L ++ Y+E A+
Sbjct: 532 IADSQELAGGFSQDVNQ-----LIGELENQRREQEEKHKQAQDLLSKTERFYQEVEAKAT 586
>gi|409991618|ref|ZP_11274864.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
gi|291572107|dbj|BAI94379.1| MutS2 family protein [Arthrospira platensis NIES-39]
gi|409937528|gb|EKN78946.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
Length = 816
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 312/588 (53%), Gaps = 63/588 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ ++ EE+ +LL QT A L + Q L L I+DI L A +L E+ A
Sbjct: 34 QLAIPETKEETDRLLAQTKEAYQLQLKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + D + L L++ ELE++I CID + +
Sbjct: 94 IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS + IRA + + + +L+ + + QA + + ++T+R R + +KA K
Sbjct: 146 -DRASVKMGEIRARLQSTRDRIYQILQGILQRKAQA--VQQQIVTQREGRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S++GAT ++EP V NN ++ +E E AI LT ++A +
Sbjct: 203 DAIP-GIVHDASTTGATVYVEPHPIVALNNELRQIQRAEQTEAEAIRRSLTEQVAAVVPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V IDLA A+A ++ W+ P S +IN+ ++HPLL+
Sbjct: 262 LEKLLAIVTTIDLALAKARYSYWLKANPPRFIDPGDTS--ETINLRQLRHPLLI------ 313
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + E V PIDI + + RVV ITGPNTGGKT +
Sbjct: 314 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 351
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA++M+K GL++PA+ +PWF +LADIGD QS+EQ+LSTFSGHI RI IL+
Sbjct: 352 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 411
Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
+ +SLVL+DEIG+GTDP+EG ALA ++LQ DR L V TTH+
Sbjct: 412 AIGEPMRVTEAGEYDRICQSLVLLDEIGAGTDPTEGTALAIALLQTFADRTRLTVATTHF 471
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
DL LK KDTRFENA+ EF+ +L+PTYR+LWG G SNAL IA+ +G D I++ A
Sbjct: 472 GDLKALKYKDTRFENASVEFNDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 531
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
V + Q + L +RR+ E++A A+ L E L+ E
Sbjct: 532 YVGGGDEDVNQ-----VIAGLEAQRRQQETKAIAASQLLKETERLHGE 574
>gi|159463342|ref|XP_001689901.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283889|gb|EDP09639.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1007
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 211/570 (37%), Positives = 305/570 (53%), Gaps = 61/570 (10%)
Query: 5 VVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSE 64
+V +P G+S E+S+ LL QT AL L++ + DI +A G L+ +
Sbjct: 100 LVAGGGLPRGRSREDSELLLQQTQEAL----EAGLEVGGLFDIRPAAEAAAGGVCLTGKQ 155
Query: 65 ICAVRRTLRAVNNVWKKLTEAAELDGDSLQ----RYSPLLELLKNCNFLTELEE----KI 116
+ V TL A + +++T A+ Q RY L L + +T+ E I
Sbjct: 156 LEGVASTLEAAFELKERVTVPAQGPQQQQQQGGLRYPSLAALAAS---ITDEERTLLRAI 212
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
CI + + D ASE L +RAER+ N E L + ++ A Q+ Q G + ++ R
Sbjct: 213 RGCI--QYGGVSDAASEALAAVRAERQANKERLRAEVEGWARQLQQKGAAEAGAVSLIRG 270
Query: 177 RMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R C+G++A + LP G + L SS+GAT ++EPK AVE NN E L+ E E +LS
Sbjct: 271 RFCIGVRAGRQGELPKGSVRLGQSSTGATLYLEPKPAVELNNAEALLAEREEGEVVRVLS 330
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
+L+ +AK ++ L+D V +D+ ARA A+W+ GV P ++ +S + G
Sbjct: 331 MLSTLLAKRAPQLMRLVDCVTALDVVAARAKHARWLSGVRPAFTADPS---ESPFWVPGA 387
Query: 296 KHPLLLGSSLRSLSAASS-NSNPLKSDVENSE-------MTVGSLSKG-ISD-------- 338
HP+L+ L L S + N D + + +T G ++D
Sbjct: 388 LHPVLMQRGLPPLPQPPSVDDNRFDRDFQAAPAWELRRVLTPDGPRPGELADGSAAGRGS 447
Query: 339 -----------FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA- 386
P P+D++V VV ITGPNTGGKT ++KT GL +LM++AGL+LP
Sbjct: 448 GGGAVDDRAALLPRPLDLRVPSSRAVVAITGPNTGGKTVTLKTAGLMTLMAQAGLFLPCD 507
Query: 387 -----------KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
PRL WFD +LADIGD QSL+QNLSTFSGHI RI IL + SLV
Sbjct: 508 PTARAEAAAAAAGTPRLAWFDRVLADIGDAQSLQQNLSTFSGHIRRIKQILAVAGPRSLV 567
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+GSGTDP EG ALA ++L L ++ L + TTH+A+L ++D R+ N + F
Sbjct: 568 LLDEVGSGTDPLEGAALARAVLDRLAEQAHLTLATTHHAELKRASEEDGRYVNVSMAFDT 627
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
TLRPTYR+ WG+ G SNAL+IA+++GFDR
Sbjct: 628 ATLRPTYRLCWGAAGASNALDIAETLGFDR 657
>gi|86609812|ref|YP_478574.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558354|gb|ABD03311.1| MutS2 family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 805
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 328/575 (57%), Gaps = 59/575 (10%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+S +S+ L QT A+ + ++Q L ++ I ++ L A G +LS E+ + TL
Sbjct: 59 QSRADSEAYLEQTEEAIRLDRTQAGGLSMAGIHNLLPALERAERGGILSGEELVQIATTL 118
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + ++L + D D L R + L+ ELE++I C++ + + D AS
Sbjct: 119 GAARRI-RRLID----DHDHLPRLQTWVSTLRT---YPELEQEIFRCLE-EHGEVRDSAS 169
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L +R +++R + L+++ +Q QA + LI +R+ R + +KA+H+ L+
Sbjct: 170 PTLADLRQQQRRQRSQIQEQLQQLMSQYPQA--LQDTLIGQRQGRFVLMVKATHRDLI-R 226
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI---AEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT ++EP VE N R +++ AEE IL+ L+A++A +++
Sbjct: 227 GIVHDSSASGATLYVEPYAVVELGN---RWRETQVQIQAEEERILAALSAQVAAVATDLE 283
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+L ++ +D+A AR ++ W++G P S + + + KHPLLL +S +
Sbjct: 284 HLQGVMVGLDVALARGRYSLWLEGNRPQFVS-------AGLRLRQAKHPLLL---WQSRA 333
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
AA S +G VPID + RVVVITGPNTGGKT ++K
Sbjct: 334 AAPS--------------------EGQGSAVVPIDFTLADSIRVVVITGPNTGGKTVALK 373
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDIL 426
TLGL LM+KAG++LPA++ P+LPWFD + ADIGD QSL+QNLSTFSGH ISRIV L
Sbjct: 374 TLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQNLSTFSGHIRRISRIVQAL 433
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +LVL+DE+G+GTDP+EG ALA +L+YL +R L + TTHY +L LK + F
Sbjct: 434 QSAPEPALVLLDEVGAGTDPTEGAALAAGLLEYLSERALLTLATTHYGELKALKYQHPCF 493
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ + D +I++RAQ+ L+ E Q R
Sbjct: 494 ENASVEFDEVTLAPTYRLLWGIPGRSNALAIAQRLQLDPEILRRAQR---HLQGESQVDR 550
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ L +R +LE +A SLH E+ LY++
Sbjct: 551 ---VIAGLEAQRAQLEERAAQVGSLHRELESLYQQ 582
>gi|376003750|ref|ZP_09781556.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
gi|375327894|emb|CCE17309.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
Length = 818
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 310/588 (52%), Gaps = 63/588 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ ++ EE+ +LL QT A L + Q L L I+DI L A +L E+ A
Sbjct: 36 QLAIPETKEETDRLLAQTKEAYQLELKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 95
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + D + L L++ ELE++I CID + +
Sbjct: 96 IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 147
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS + IRA + + + +L+ + + QA + + +IT+R R + +KA K
Sbjct: 148 -DRASVKMGAIRARLQSTRDRIYQVLQGILQRKAQA--VQQQIITQREGRFVIPVKAPQK 204
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S++GAT ++EP V NN ++ +E E AI LT ++A +
Sbjct: 205 DAIP-GIVHDASTTGATVYVEPHSIVALNNQLRQIQRAEQTEAEAIRRSLTEQVAAVVPD 263
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V IDLA A+A ++ W+ P S +IN+ ++HPLL+
Sbjct: 264 LEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGDTS--ETINLRQLRHPLLI------ 315
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + E V PIDI + + RVV ITGPNTGGKT +
Sbjct: 316 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 353
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA++M+K GL++PA+ +PWF +LADIGD QS+EQ+LSTFSGHI RI IL+
Sbjct: 354 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 413
Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
+ SLVL+DEIG+GTDP+EG ALA ++LQ D L V TTH+
Sbjct: 414 AIGEPMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADLTRLTVATTHF 473
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
DL LK KDTRFENA+ EF +L+PTYR+LWG G SNAL IA+ +G D I++ A
Sbjct: 474 GDLKALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 533
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
V + Q + + L +RR+ E++A A+ L E L+ E
Sbjct: 534 YVGGGDEDVNQ-----VIEGLEAQRRQQETKAIAASQLLQETERLHGE 576
>gi|428778485|ref|YP_007170271.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
gi|428692764|gb|AFZ48914.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
Length = 798
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 282/502 (56%), Gaps = 46/502 (9%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D L+ L L+ ELE++I C+D K + +RAS L IR + K + +
Sbjct: 109 DGLEASPRLKALISQVRTYPELEKEINRCLDDKGKVT-ERASPKLAEIRQKIKERRDRIY 167
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
L+ + Q Q G I +P+IT+R R + +KA K + GI + SS+GAT ++EP
Sbjct: 168 QKLQNIIQQ--QGGAIQEPVITQRNDRFVLPVKAGQKESI-RGIVHDSSSTGATLYIEPN 224
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
VE N + + E EE +L +LT ++A + +++ L+ ++DLA AR+ ++ W
Sbjct: 225 SVVELGNQQRQYIRQEQREEERVLQVLTEQVATVKEDLELLLAVATKLDLATARSRYSLW 284
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
++ P + + I + ++HPLL+ P+
Sbjct: 285 LEANPPRFVEGNS---NEPITLRRLRHPLLV------WQQHHEQGTPV------------ 323
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ ETRVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK
Sbjct: 324 ----------VPIDVQINPETRVVAITGPNTGGKTVTLKTVGLAALMAKVGLFVPAKEPV 373
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS------RESLVLIDEIGSGT 444
+PWFD ILADIGD QS+EQNLSTFSGHI RI I++ + + L+L+DE+G+GT
Sbjct: 374 EIPWFDKILADIGDEQSIEQNLSTFSGHIRRITRIIDSLQPSDSEIQPCLILLDEVGAGT 433
Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
DP+EG A+A ++L+YL +V L + TTHY +L LK +D RFENA+ EF+ ETL PTYR+
Sbjct: 434 DPAEGSAIAIALLKYLAQQVRLTIATTHYGELKALKYQDERFENASVEFNDETLSPTYRL 493
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 564
LWG G SNAL IA+ +G +I+ A+ + + Q + L +RR+ E +
Sbjct: 494 LWGIPGRSNALTIARRLGLAGEILDMAKNRIGGGSEDINQ-----VIAGLENQRREQEEK 548
Query: 565 ARTAASLHAEIMDLYREDSTSA 586
A+ A L + Y+E S+ A
Sbjct: 549 AQEARQLLEQAEKFYQEVSSRA 570
>gi|209523920|ref|ZP_03272472.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|423063765|ref|ZP_17052555.1| MutS2 family protein [Arthrospira platensis C1]
gi|209495592|gb|EDZ95895.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|406714614|gb|EKD09775.1| MutS2 family protein [Arthrospira platensis C1]
Length = 816
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 310/588 (52%), Gaps = 63/588 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ ++ EE+ +LL QT A L + Q L L I+DI L A +L E+ A
Sbjct: 34 QLAIPETKEETDRLLAQTKEAYQLELKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + D + L L++ ELE++I CID + +
Sbjct: 94 IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS + IRA + + + +L+ + + QA + + +IT+R R + +KA K
Sbjct: 146 -DRASVKMGEIRARLQSTRDRIYQVLQGILQRKAQA--VQQQIITQREGRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S++GAT ++EP V NN ++ +E E AI LT ++A +
Sbjct: 203 DAIP-GIVHDASTTGATVYVEPHSIVVLNNQLRQIQRAEQTEAEAIRRSLTEQVAAVVPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V IDLA A+A ++ W+ P S +IN+ ++HPLL+
Sbjct: 262 LEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGDTS--ETINLRQLRHPLLI------ 313
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + E V PIDI + + RVV ITGPNTGGKT +
Sbjct: 314 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 351
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA++M+K GL++PA+ +PWF +LADIGD QS+EQ+LSTFSGHI RI IL+
Sbjct: 352 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 411
Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
+ SLVL+DEIG+GTDP+EG ALA ++LQ D L V TTH+
Sbjct: 412 AIGEPMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADLTRLTVATTHF 471
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
DL LK KDTRFENA+ EF +L+PTYR+LWG G SNAL IA+ +G D I++ A
Sbjct: 472 GDLKALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 531
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
V + Q + + L +RR+ E++A A+ L E L+ E
Sbjct: 532 YVGGGDEDVNQ-----VIEGLEAQRRQQETKAIAASQLLQETERLHGE 574
>gi|443327052|ref|ZP_21055687.1| MutS2 family protein [Xenococcus sp. PCC 7305]
gi|442793341|gb|ELS02793.1| MutS2 family protein [Xenococcus sp. PCC 7305]
Length = 804
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 326/602 (54%), Gaps = 71/602 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLD----LSTIEDIAGILNSAVS 56
+G Q Q+P +S E S +LL QT+ + Q LD ++DI L
Sbjct: 27 IGAVAAQNLQLP--QSKEVSLQLLAQTTEIYNL--EQELDSGWTFRGVKDIGVALERTKI 82
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEK 115
G +LS E+ + TL + + + + DS P+L EL+ E+E++
Sbjct: 83 GGILSAQELLDIATTLAGIRYLRRII--------DSKTEELPVLNELIFPVRTYPEIEQQ 134
Query: 116 IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITK 173
I CID + I DRA+ + IRA+ K +L +++ +I Q+ G + + +IT+
Sbjct: 135 IHHCIDDRGEIT-DRANPRIAGIRAKVK----SLRRQIRQSLQRIIQSNLGSVQEAVITQ 189
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +K K +P GI +VSS+G+T ++EP V N + + EE +
Sbjct: 190 RSDRFVIPVKPGQKETIP-GIVHDVSSTGSTLYIEPSSVVNAGNALRQAEKQQKREEEIV 248
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L LT +I + + +++ L+ +DLA ARA ++ W++ P +S ++ +
Sbjct: 249 LRELTEKITEVQEDLEELLAIATVLDLATARARYSLWLEANPPRFIERSE-----TVTLR 303
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
++HPLL+ A VPID+K+E +TRV
Sbjct: 304 RLQHPLLVWQQKHESGTAV----------------------------VPIDVKIEPQTRV 335
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK +PWF+ +LADIGD QSL+Q+LS
Sbjct: 336 VAITGPNTGGKTVTLKTIGLAALMAKAGIFVPAKVPVEIPWFNTVLADIGDEQSLQQSLS 395
Query: 414 TFSGHISRIVDILELVSRE---------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
TFSGHI RI I+E + + SLVL+DE+G+GTDP+EG ALA ++L+YL +
Sbjct: 396 TFSGHIRRISRIIEALKPQEELKANCSNSLVLLDEVGAGTDPAEGSALAIALLKYLAEHS 455
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L V TTHY +L LK +D RFENA+ EF +L+PTYR+LWG G SNAL IA+ +G D
Sbjct: 456 LLTVATTHYGELKALKYQDERFENASVEFDDSSLQPTYRLLWGIPGRSNALTIAQRLGLD 515
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDST 584
+I+ AQ LV + + +++ +L +RR+ ES+A A L ++ Y E S
Sbjct: 516 SEIVTDAQNLVGIGKTD----DVNQVIAALENQRREQESKAEEAGKLLSQTELFYEEVSQ 571
Query: 585 SA 586
A
Sbjct: 572 RA 573
>gi|220908146|ref|YP_002483457.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7425]
gi|219864757|gb|ACL45096.1| MutS2 family protein [Cyanothece sp. PCC 7425]
Length = 818
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 211/597 (35%), Positives = 321/597 (53%), Gaps = 74/597 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
+P S ESQ L+ QT + + P LS I D+ L A G LL+ E+ +
Sbjct: 37 LPIPTSEAESQMLMQQTQEVYTLENASPTSLSFEGIYDLTHALERAGLGGLLTAVELSQI 96
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
TL A N+ + + Q PLL +L+ ELE++I CID +
Sbjct: 97 ASTLAAARNLRRTIER---------QPDCPLLSQLVTPLRTYPELEQEIHRCID-DAGEV 146
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR +++ + + +L+ + + +A + + +IT+R R + +KA K
Sbjct: 147 ADRASAKLTDIRDRQRQVRQQIQRILQDILQR--KANALQEAVITQRSDRFVIPVKAPQK 204
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + SSSGAT ++EP+ + NN +L+ E E AIL L+ ++ + +
Sbjct: 205 DAIP-GIVHDSSSSGATLYIEPQSTINLNNQLRQLARQEQTEVEAILRQLSQQVGAVQAD 263
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +DLA AR+ ++ W++G P V + I + ++HPLL+
Sbjct: 264 LEQLLQIVTHLDLAAARSRYSTWLEGNRPHFIK---VHSNDKITLRQLRHPLLVWQQRHE 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
A P+ VPID+ + +TRVVV+TGPNTGGKTAS
Sbjct: 321 QGA------PV----------------------VPIDLSIHPQTRVVVMTGPNTGGKTAS 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL +LM+KAGL++PA+ LPWF+ ILADIGD QSL+Q+LSTFSGHI I IL+
Sbjct: 353 LKTLGLTALMAKAGLFIPAREPVELPWFEQILADIGDEQSLQQSLSTFSGHIRCISQILD 412
Query: 428 LVS-----------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
+ ++LVL+DE+G+GTDP+EG ALA ++L YL D
Sbjct: 413 ALDDPNADPSASLMENGHDHISSDSLAQALVLLDEVGAGTDPTEGTALAIALLHYLADHT 472
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L V TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA+ +G +
Sbjct: 473 YLTVATTHFGELKALKYQDQRFENASVEFDEASLAPTYRLLWGIPGRSNALAIARRLGLN 532
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+++ A+ + R+ +++ L +R++ E++++ AA L A+ L+RE
Sbjct: 533 ERVLTAAETELG----GRKTEDVNQVIAGLEAQRKQQETRSQAAAELLAQTERLHRE 585
>gi|427731199|ref|YP_007077436.1| MutS2 family protein [Nostoc sp. PCC 7524]
gi|427367118|gb|AFY49839.1| MutS2 family protein [Nostoc sp. PCC 7524]
Length = 822
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 218/622 (35%), Positives = 322/622 (51%), Gaps = 90/622 (14%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP +++ S++LL QT + + L ++DI L A +L+ E+ A
Sbjct: 36 QIPTSQAV--SEQLLAQTKEVYQLESRLTPGLSFEGVQDIGDSLERAELQGILAGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL N+ + + +L P+L EL+ + ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRIIDNQEDL---------PVLNELVADLRTYPELEQEIHRCIDERGQV 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKA 184
DRAS+ L IR E +R L S + + I QA G + + +IT+R R + +KA
Sbjct: 145 T-DRASQKLGEIRTELRR----LRSQITQKLQNILQAKSGAVQEQIITQRGDRFVIPVKA 199
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
K +P GI + S+SGAT ++EP V N + E AEE AI +LT +IA
Sbjct: 200 PQKDAIP-GIVHDTSTSGATLYIEPNSIVPMGNQLRQTVRREQAEEEAIRRILTEQIAAV 258
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ +++ L+ V +DLA ARA ++ W++ P S+ I + ++HPLL+
Sbjct: 259 KPDLERLLAIVTTLDLATARARYSLWLNANPPRFISREEQEI---ITLRQLRHPLLV--- 312
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+P+ +P+D+ + +VV ITGPNTGGK
Sbjct: 313 ---WQQHHEQGHPV----------------------IPVDLLISPHIKVVTITGPNTGGK 347
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGLA+LM+K GL++PA+ +PWF+ ILADIGD QSL+Q+LSTFSGHI RI
Sbjct: 348 TVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQILADIGDEQSLQQSLSTFSGHIRRISR 407
Query: 425 ILE--------------------------------LVSRESLVLIDEIGSGTDPSEGVAL 452
IL L + SLVL+DE+G+GTDP+EG AL
Sbjct: 408 ILNALGTDDRGQVTGDREQVTGDRGEEFLLTPHSPLPTPHSLVLLDEVGAGTDPTEGSAL 467
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A ++LQYL D L + TTH+ +L LK +D RFENA+ EF+ TL PTYR+LWG G S
Sbjct: 468 AIALLQYLADHAQLTIATTHFGELKALKYEDARFENASVEFNEATLSPTYRLLWGIPGRS 527
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
NAL IA +G ++I++A+ V E Q + L ++RR+ E++A A L
Sbjct: 528 NALAIALRLGLKPEVIEQAKTQVGEATDEVNQ-----VIAGLEDQRRRQETKAAEAQKLL 582
Query: 573 AEIMDLYREDSTSASISVYRYQ 594
+ LY+E S A+ R Q
Sbjct: 583 QQAERLYKEVSAKAAALEEREQ 604
>gi|427723948|ref|YP_007071225.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
gi|427355668|gb|AFY38391.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
Length = 801
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 317/580 (54%), Gaps = 54/580 (9%)
Query: 13 FGKSLEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
F S ES+ LL QT L + I +++ L A G ++S ++ +
Sbjct: 39 FPGSQAESEILLAQTVEITELDAETEGGISFEGIGNVSESLERATIGGIISGQDLLLIAT 98
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
TL V + ++L E +EL+ LL L++ ELE++I CID + + DR
Sbjct: 99 TLAGVRKL-RRLVENSELE------LPQLLFLVEQLRTYPELEKEIHHCIDDRGDVT-DR 150
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS L IR + K + + L ++ + G I + +IT+R R + +KA K +
Sbjct: 151 ASPKLAGIREKMKGARDGIYQTLNRIMQR--HGGSIQEAVITQRGDRFVLPVKAGQKEHI 208
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P GI ++SS+G+T+++EPK ++ N + + E E IL LT ++A+ +++
Sbjct: 209 P-GIVHDISSTGSTFYVEPKAIIDLGNRLRQATKQEQREIEIILRQLTEKVAEVVEDLEK 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+ IDLA AR+ ++ W++ P + + + + HPLL+
Sbjct: 268 LLAIATTIDLATARSRYSHWLEANPPKFTKPEQPTM-----LRKLHHPLLVWQ------- 315
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+ E E+ VPI++++ + +VV ITGPNTGGKT ++KT
Sbjct: 316 --------QKQEEGDEV-------------VPINVQIRPDIKVVAITGPNTGGKTVTLKT 354
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LG+A+LM+K GL++PA LPWF+ +LADIGD QSL+Q+LSTFSGHI R+ I+E +
Sbjct: 355 LGMAALMAKVGLFIPAIAPVELPWFNHVLADIGDEQSLQQSLSTFSGHIRRVGRIIETLQ 414
Query: 431 RE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
E +LVL+DE+G+GTDP+EG ALA ++L+YL D L V TTHY +L LK D RFE
Sbjct: 415 AEDENNLVLLDEVGAGTDPTEGSALAIALLKYLADHAALTVATTHYGELKALKYDDDRFE 474
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF +LRPTY++LWG G SNAL IAK +G D ++I AQ L+ +
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAKRLGLDEQVIDAAQSLLGNSNTD-----V 529
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+E+ +L +RR+ E +++ A +L + Y E S+ A+
Sbjct: 530 NEVIAALEAQRREQEQKSQEAEALLKQTERFYTEVSSKAA 569
>gi|37523206|ref|NP_926583.1| recombination and DNA strand exchange inhibitor protein
[Gloeobacter violaceus PCC 7421]
gi|35214209|dbj|BAC91578.1| glr3637 [Gloeobacter violaceus PCC 7421]
Length = 790
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 292/526 (55%), Gaps = 53/526 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+PF ++ E+++ L + AL + +S P L + DIA + A G LL+ + AV
Sbjct: 40 LPF-EARSEAERWLQRAEEALRLAESVPGGLAFDGVHDIASDVERAGRGGLLTGEALLAV 98
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL A + + + E + + L L+ ELE++I CID +
Sbjct: 99 ASTLAAARRLRRAIEEHS-------GQAEELALLVAEVRTFPELEQEIYRCID-DTGEVA 150
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASH 186
DRASE L +R+ +R L + +++ Q+ Q A + LIT+R R V +K SH
Sbjct: 151 DRASEKLRDLRSGHRR----LRAEIQRTLLQLLQRRANCFQESLITQRGERFVVPVKVSH 206
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ +P GI + S+SG T F+EP ++ N V +E E IL+ L A +A+
Sbjct: 207 RDQVP-GIVHDSSASGQTLFVEPMAVIDTTNRLVEGMRAEQVEIERILAELAALVAERAT 265
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ +L ++++DLA ARA +A W+ V P + + ++HPLL+
Sbjct: 266 ELLHLHRVLVDLDLAAARARYASWLGAVRPRFG-------ERGCGLVQVRHPLLVWQE-- 316
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
P+ VP+D+ V+ R VVITGPNTGGKT
Sbjct: 317 ----RHEQGTPV----------------------VPVDLPVDPAVRAVVITGPNTGGKTV 350
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL LM++AGL++PA++ LPWFD +LADIGD QS+EQNLSTFSGHI RIV IL
Sbjct: 351 TLKTLGLVVLMAQAGLFVPARDPAVLPWFDRVLADIGDEQSIEQNLSTFSGHIRRIVRIL 410
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ ++LVL+DE+G+GTDP EG ALA ++L +L +R GL + TTHY +L LK + F
Sbjct: 411 AALTPDALVLLDEVGAGTDPQEGAALARALLVHLAERAGLVLATTHYGELKALKYTQSHF 470
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
ENA+ EF L TL PTYR+LWG G SNAL IA+ +G D +++ AQ
Sbjct: 471 ENASVEFDLATLSPTYRLLWGIPGRSNALTIAERLGLDAQVVAVAQ 516
>gi|282900091|ref|ZP_06308048.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
gi|281194973|gb|EFA69913.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
Length = 815
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 316/594 (53%), Gaps = 65/594 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+P +LEES+ LL QT + ++SQ L I+DI L A LLS E+ A
Sbjct: 35 LPIPSTLEESEGLLCQTKE-VYQLESQLISGLSFEGIQDIGDSLERAELHGLLSSEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L +L+ ELE++I CID + I
Sbjct: 94 IATTLAGARNLRRVI--------DNQEDLPILCDLVSQLRTYPELEQEIHHCIDERAQIA 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKAS 185
DRAS+ L IR ++ L S + + I Q + + + +IT+R R + +KA
Sbjct: 146 -DRASQKLSEIR----EDLRKLRSQITQKLHNIIQVKSNALQELIITQRGDRYVLPVKAV 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
K +P GI + S+SGAT ++EP V N + E E AIL +LT ++A+ +
Sbjct: 201 QKDAVP-GIVHDSSTSGATLYIEPNSIVSMGNQLRQTLKREQVEIEAILRILTTKVAEVK 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INIEGIKHPLLLGS 303
+++ L+ V ID+A A+A ++ W++G P L S SS I + ++HPLL+
Sbjct: 260 PDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRLIHPSIPGGSSSEIITLRQLRHPLLV-- 317
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P+ VP+D+ + +VV ITGPNTGG
Sbjct: 318 ----WQQKHEQGHPV----------------------VPVDLLISPHIKVVTITGPNTGG 351
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KTLGLA+LM+K GL++PA+ +PWF +LADIGD QSL Q+LSTFSGHI RI
Sbjct: 352 KTVTLKTLGLAALMAKVGLFIPAREPVEIPWFSHVLADIGDEQSLAQSLSTFSGHIRRIS 411
Query: 424 DILELVSRE----------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
IL + E SL+L+DE+G+GTDP+EG ALA ++L+YL D L + TTH+
Sbjct: 412 RILNAIGEERQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQLTIATTHF 471
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK +D RFENA+ EF+ TL PTYR+LWG G SNAL IA +G ++++ A+
Sbjct: 472 GELKSLKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKS 531
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ E Q + L +RR E++A A L + LY+E S A+
Sbjct: 532 QLGETTDEVNQ-----VIAGLEAQRRSQETKAAAAQELLKQTEKLYKEVSQRAT 580
>gi|427708044|ref|YP_007050421.1| MutS2 protein [Nostoc sp. PCC 7107]
gi|427360549|gb|AFY43271.1| MutS2 protein [Nostoc sp. PCC 7107]
Length = 796
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 315/588 (53%), Gaps = 62/588 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP +S+ S++LL QT + + L I+DI + A +L+ E+ A
Sbjct: 36 QIPTSQSV--SEQLLAQTKEVYQLESRLATGLSFDGIQDIGDSIERAELRGILAGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L +L+ + ELE++I CID + I+
Sbjct: 94 IATTLAGARNLRRVI--------DNQEDTPVLTDLVADLRTYPELEQEIHRCIDERG-IV 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKAS 185
DRAS+ L IR + +R L S + + I QA + + LIT+R R + +KAS
Sbjct: 145 ADRASQKLGEIRDDLRR----LRSQINQKLHNILQAKSNAVQEQLITQRGDRFVIPVKAS 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
HK +P GI + S+SG T ++EP V N + E AEE A+ +LT ++A
Sbjct: 201 HKDAIP-GIVHDSSTSGVTLYVEPSSIVPMGNQLRQTLKREQAEEEAVRRILTEQVAAVT 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+++ L+ V +DLA AR+ ++ W+ P ++ + + ++HPLL+
Sbjct: 260 PDLERLLAIVTTLDLAAARSRYSYWLKANPPRFINREEQEI---VTLRQLRHPLLIWQQQ 316
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+G S +P+D+ + +VV ITGPNTGGKT
Sbjct: 317 HE--------------------------QGHS--VIPVDLLISPHIKVVTITGPNTGGKT 348
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ +PWFD ILADIGD QSL+Q+LSTFSGHI RI I
Sbjct: 349 VTLKTLGLAALMAKVGLFIPAREPVEMPWFDQILADIGDEQSLQQSLSTFSGHIRRISRI 408
Query: 426 LELVSRE------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
L + E SLVL+DE+G+GTDP+EG ALA ++LQ+L + L + TTH+ +L L
Sbjct: 409 LNALEHEVENQPNSLVLLDEVGAGTDPAEGSALAIALLQHLAEHAQLTIATTHFGELKAL 468
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G ++++ A+ V
Sbjct: 469 KYEDARFENASVEFDEATLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKTQVGEAS 528
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
E Q + L +RR+ E++A A L + LY+E S A+
Sbjct: 529 DEVNQ-----VIAGLEAQRRRQETKAAEAQKLLQQAERLYKEVSDKAA 571
>gi|307152450|ref|YP_003887834.1| MutS2 family protein [Cyanothece sp. PCC 7822]
gi|306982678|gb|ADN14559.1| MutS2 family protein [Cyanothece sp. PCC 7822]
Length = 801
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 214/583 (36%), Positives = 321/583 (55%), Gaps = 65/583 (11%)
Query: 18 EESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EES +LL QT + Q + L I DI L + G +LS E+ ++ TL V
Sbjct: 42 EESSQLLAQTEEVYDLEQRLNTALSFEGITDIGDALERSDLGGVLSGKELLSIATTLAGV 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + + E Q P+L+ L+ N E+E++I CI+ + DRAS
Sbjct: 102 RRLRRLIEE---------QEKIPVLKTLVANVRTYPEIEQEIHRCIEEDGEVS-DRASPR 151
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + K E + L+ + + Q+G + + +IT+R R + +KA K +P GI
Sbjct: 152 LREIRGQMKVVRERIYRKLQDIMQR--QSGAMQESVITQRGDRFVLPVKAPQKDQVP-GI 208
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SS+GAT ++EP VE N + SE EE IL L+A++A+ + +++ L+
Sbjct: 209 IHDSSSTGATLYIEPSSVVELGNQLRQYHRSEQIEEETILRGLSAKVAEVKEDLEDLLAA 268
Query: 255 VLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+DLA AR+ ++ W+ G P + H++ ++HPLL+
Sbjct: 269 ATILDLAVARSRYSWWLKGNPPRFIEPHEHITLRQ------LRHPLLIWQ---------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+ + E+ VPI+++V+ + RVV ITGPNTGGKT ++KT+GL
Sbjct: 313 -----QQHEQGPEV-------------VPINVQVDPKIRVVAITGPNTGGKTVTLKTVGL 354
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV---- 429
A+LM+KAG+++PAK LPWF+ ILADIGD QSL+Q+LSTFSGHI RI+ I+E +
Sbjct: 355 AALMAKAGIFIPAKVPVELPWFEQILADIGDEQSLQQSLSTFSGHIRRIIRIIEALNPTS 414
Query: 430 -----SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
+ SLVL+DE+G+GTDP+EG ALATS+L+YL + GL + TTHY +L LK +D
Sbjct: 415 EAPTTASSSLVLLDEVGAGTDPAEGSALATSLLKYLAEAAGLTIATTHYGELKALKYQDE 474
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
RFENA+ EF+ +TL PTYR+LWG G SNAL IA +G II+ A+ V +
Sbjct: 475 RFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRLGLRPDIIEDARTRVGGFSED--- 531
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ + L ++RR+ E +A+ A L + Y E S A+
Sbjct: 532 --INRVIAGLEQQRREQEEKAKEATQLLKQTERFYAEVSQKAN 572
>gi|428317789|ref|YP_007115671.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
gi|428241469|gb|AFZ07255.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
Length = 874
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 306/585 (52%), Gaps = 63/585 (10%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L I+DI L A LLS E+ A+ TL + + + DS
Sbjct: 74 LSFEGIQDIGTSLQRAELQGLLSGEELLAIATTLAGARQLRRII--------DSQPDVPT 125
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L EL ELE++I CID + + DRA+ L IR + ++ + + +L+ +
Sbjct: 126 LQELAAQLRTYPELEQEIHRCIDDRAQVA-DRATPKLAGIRVQMRQLRDRIYQILQGILQ 184
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ Q+ + + LIT+R R + +KA K +P GI + S+SGAT ++EP V NN
Sbjct: 185 R--QSNAVQEQLITQRSGRFVIPVKAPQKDAIP-GIVHDSSASGATLYVEPHSTVNLNNQ 241
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-- 276
+L E AEE A+ LT ++A + ++ L+ V +DLA A+A ++ W+ P
Sbjct: 242 MRQLLRQEQAEEEAVRRALTEQVAAVKPDLDRLVVVVTTLDLATAKARYSYWLQANPPKF 301
Query: 277 -------ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
+ + + E ++ LL +LRS +PL + E
Sbjct: 302 IELGEPELAPKNPETEDEEKADEENSENSQLLIPNLRSQITLRQLRHPLLVWQQQHE--- 358
Query: 330 GSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
FPV P+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+KAG+++ A+
Sbjct: 359 -------QGFPVVPVDLTIGPHIRVVAITGPNTGGKTVTLKTLGLAALMAKAGMFVAARE 411
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----------------- 431
LPWFD ILADIGD QSL+Q+LSTFSGHI RI ILE++
Sbjct: 412 PVELPWFDNILADIGDEQSLQQSLSTFSGHIRRISRILEVLHNKSEGESAGEGEENSQFP 471
Query: 432 ---------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+SLVL+DE+G+GTDPSEG ALA ++L+YL L V TTH+ +L LK +
Sbjct: 472 MPHAQFPMPKSLVLLDEVGAGTDPSEGSALAIALLKYLAQHSLLTVATTHFGELKALKYQ 531
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF +++PTYR+LWG G SNAL IAK +G +I++ AQ V +
Sbjct: 532 DSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRLGLLPEIVEEAQTYVGGASQDV 591
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
Q + L +RRK E++AR A L + L+RE S A+
Sbjct: 592 NQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKAA 631
>gi|282896735|ref|ZP_06304743.1| MutS 2 protein [Raphidiopsis brookii D9]
gi|281198453|gb|EFA73341.1| MutS 2 protein [Raphidiopsis brookii D9]
Length = 814
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 212/596 (35%), Positives = 316/596 (53%), Gaps = 70/596 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+P +LEES+ LL QT + ++SQ L I+DI L A LLS E+ A
Sbjct: 35 LPIPSTLEESEGLLCQTKE-VYQLESQLISGLSFEGIQDIGDSLERAELHGLLSSEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L +L+ ELE+++ CID + I
Sbjct: 94 IATTLAGARNLRRVI--------DNQEDLPILCDLVSQLRTYPELEQEVHHCIDERAQIA 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKAS 185
DRAS+ L IR ++ L S + + I Q + + + +IT+R R + +KA
Sbjct: 146 -DRASQKLSEIR----EDLRKLRSQITQKLHNIIQVKSNALQELIITQRGDRYVLPVKAP 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
K +P GI + S+SGAT ++EP V N + E E AIL +LT ++A+ +
Sbjct: 201 QKDAVP-GIVHDSSTSGATLYIEPNSIVSMGNQLRQTLKREQVEIEAILRILTTKVAEVK 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS----INIEGIKHPLLL 301
+++ L+ V ID+A A+A ++ W++G P L H S S I + ++HPLL+
Sbjct: 260 PDLEKLLAIVTTIDVAAAKARYSLWIEGNPPRLI---HPSIPGSSSQIITLRQLRHPLLV 316
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P+ VP+D+ + +VV +TGPNT
Sbjct: 317 ------WQQKHEQGHPV----------------------VPVDLLISPHIKVVTMTGPNT 348
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KTLGLA+LM+K GL++PA+ +PWF +LADIGD QSL Q+LSTFSGHI R
Sbjct: 349 GGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFSQVLADIGDEQSLAQSLSTFSGHIRR 408
Query: 422 IVDILELVSRE----------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
I IL + E SL+L+DE+G+GTDP+EG ALA ++L+YL D L + TT
Sbjct: 409 ISRILNAIGEEIQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQLTIATT 468
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
H+ +L LK +D RFENA+ EF+ TL PTYR+LWG G SNAL IA +G ++++ A
Sbjct: 469 HFGELKSLKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENA 528
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ + E Q + L +RR E++A A L + LY+E S A+
Sbjct: 529 KSQLGGTTDEVNQ-----VIAGLEAQRRSQETKAAAAQELLKQTEKLYKEVSQRAT 579
>gi|434407615|ref|YP_007150500.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
gi|428261870|gb|AFZ27820.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
Length = 814
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 214/616 (34%), Positives = 319/616 (51%), Gaps = 82/616 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G ++ +IP +S ES++LL QT + + L I+DI L A
Sbjct: 27 LGAIAARQLKIP--ESQAESEQLLAQTKEVYQLESRLTPGLSFEGIQDIGDSLERAERSG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
+L+ E+ A+ TL N+ + + +L P+L EL+ + ELE++I
Sbjct: 85 ILTGDELLAIATTLAGARNLRRVIDNQEDL---------PILNELVADLRTYPELEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRR 175
CID + + DRAS+ L IR + +R L S + + I QA G + + LIT+R
Sbjct: 136 RCIDERAQVT-DRASQKLGEIRLDLRR----LRSQITQKLQNIIQAKSGAVQEQLITQRG 190
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +KA K +P GI + S+SGAT ++EP V N ++ E EE AI
Sbjct: 191 DRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPHSVVPIGNQLRQVIRKEQTEEEAIRR 249
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
LT ++A + +++ L+ +DLA A++ ++ W+ P + IN+ +
Sbjct: 250 ALTEQVAAVKPDLERLLAIATSLDLATAKSRYSFWIGANPPRFIQRQDQEI---INLRHL 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPLL+ P+ VP+D+ + + RVV
Sbjct: 307 RHPLLVWQQ------QHEQGQPV----------------------VPVDLFISPQIRVVT 338
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTF
Sbjct: 339 ITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTF 398
Query: 416 SGHISRIVDILE------------------------LVSRESLVLIDEIGSGTDPSEGVA 451
SGHI RI ILE L +SLVL+DE+G+GTDP EG A
Sbjct: 399 SGHIRRISRILEALGDNSSVTGNEEDSEQLPITHYPLPITKSLVLLDEVGAGTDPVEGSA 458
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LA ++LQYL + L + TTH+ +L LK ++ RFENA+ EF TL PTYR+LWG G
Sbjct: 459 LAIALLQYLANHAQLTIATTHFGELKALKYENERFENASVEFDESTLSPTYRLLWGIPGR 518
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
SNAL IA +G ++I++A+ V E + + L +RR+ E++A A L
Sbjct: 519 SNALTIALRLGLKPEVIEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQDL 573
Query: 572 HAEIMDLYREDSTSAS 587
+ LY+E S A+
Sbjct: 574 LRQAEILYKEVSAKAA 589
>gi|298491014|ref|YP_003721191.1| MutS2 family protein ['Nostoc azollae' 0708]
gi|298232932|gb|ADI64068.1| MutS2 family protein ['Nostoc azollae' 0708]
Length = 825
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 320/626 (51%), Gaps = 95/626 (15%)
Query: 4 AVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
A+V +A +P +LEES++LL QT L + ++ L I+DI L A +LS
Sbjct: 29 AIVARA-LPIPTTLEESKELLAQTKEVYQLESLLTKGLSFEGIQDIGDSLERAELQGILS 87
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+ A+ TL N+ + + D+ + EL+ ELE++I CID
Sbjct: 88 GEELLAIATTLAGARNLRRLI--------DNQEDIPIFAELVAELRTYPELEQEIHRCID 139
Query: 122 CKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
+ + DRAS+ L E +R R + + L ++++ ++G + +P+IT+R SR
Sbjct: 140 ERAQVT-DRASQKLGEIREYLRKSRGQITQKLHNIIQA------KSGALQEPIITQRGSR 192
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ +KA K +P GI + S+SGAT ++EP V N + E AEE AI L
Sbjct: 193 YVIPVKAPQKDAVP-GIVHDTSTSGATLYIEPNSIVSMGNQLRQAIRREQAEEEAIRRSL 251
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T ++A + +++ L+ V +D+A A+A ++ W+ P ++ I + ++H
Sbjct: 252 TEQVAAVKPDLEKLLAIVTTLDIATAKARYSFWIGANPPRFVNRQEQQI---ITLRQLRH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL+ +P+ +P+D+ + +VV IT
Sbjct: 309 PLLV------WQQHHEQGHPV----------------------IPVDLLISPHIKVVTIT 340
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT +++TLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSG
Sbjct: 341 GPNTGGKTVTLRTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSG 400
Query: 418 HISRIVDILELVSR------------------------------------ESLVLIDEIG 441
HI RI IL + SLVL+DE+G
Sbjct: 401 HIRRISRILNALGTGDRGVGTRDWEMGEMRGDGGDGEGIFLMPNAQCTMPNSLVLLDEVG 460
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP EG ALA ++LQYL D L + TTH+ +L LK +D RFENA+ EF+ TL PT
Sbjct: 461 AGTDPVEGSALAIALLQYLADHAQLTIATTHFGELKALKYEDIRFENASVEFNDATLSPT 520
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
YR+LWG G SNAL IA +G ++++ A+ V E Q + L +RR
Sbjct: 521 YRLLWGIPGRSNALAIALRLGLKPEVVEAAKSQVGEATDEVNQ-----VIAGLEAQRRSQ 575
Query: 562 ESQARTAASLHAEIMDLYREDSTSAS 587
E++A A L + LY+E S A+
Sbjct: 576 ETKAAEAQELLRQAEKLYKEVSQKAT 601
>gi|427721207|ref|YP_007069201.1| MutS2 protein [Calothrix sp. PCC 7507]
gi|427353643|gb|AFY36367.1| MutS2 protein [Calothrix sp. PCC 7507]
Length = 828
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 221/619 (35%), Positives = 313/619 (50%), Gaps = 95/619 (15%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP S ES +LL QT + + L I+DI L A +L+ E+ A
Sbjct: 36 QIP--DSQAESIQLLEQTKEVYQLENRLTTSLSFDGIQDIGDALERAELQGILTGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL N+ + + +LD P+L L+ ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRVIDN--QLD-------CPILTALVAELRTYPELEQEIHRCIDERGQV 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKA 184
DRAS+ L IR + +R L S + + I QA G + + LIT+R R + +KA
Sbjct: 145 T-DRASQKLGEIRTDLRR----LRSQITQKLQNILQAKSGAVQEQLITQRGDRFVIPVKA 199
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
K +P GI + S+SGAT ++EP V N ++ E AEE AI LT ++A
Sbjct: 200 PQKDAIP-GIVHDTSTSGATLYVEPNSIVPMGNQLRQVIRKEQAEEEAIRRALTEQVAAV 258
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ +++ L+ V +DLA ARA ++ W+ P H I + ++HPLL+
Sbjct: 259 KPDLERLLAIVTTLDLATARARYSFWLGANPPRFI---HRQDQEIITLRHLRHPLLV--- 312
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P+ VP+D+ + RVV ITGPNTGGK
Sbjct: 313 ---WQQQHEQGQPV----------------------VPVDLLISPHIRVVTITGPNTGGK 347
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 348 TVTLKTLGLAALMAKVGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISR 407
Query: 425 ILELV---------------SRE----------------------SLVLIDEIGSGTDPS 447
IL + SRE +LVL+DE+G+GTDP
Sbjct: 408 ILNALGHGEEAALRLRSGQGSREQGAGEQNLELRTPDSVLSTQHSALVLLDEVGAGTDPV 467
Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
EG ALA ++LQYL D LA+ TTH+ +L LK +D RFENA+ EF TL PTYR+LWG
Sbjct: 468 EGSALAIALLQYLADHAQLAIATTHFGELKALKYEDERFENASVEFDETTLSPTYRLLWG 527
Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
G SNAL IA +G ++I+ A+ V E Q + L +RR+ E++A
Sbjct: 528 IPGRSNALTIALRLGLKPEVIEHAKTQVGEATDEVNQ-----VIAGLEAQRRRQETKATE 582
Query: 568 AASLHAEIMDLYREDSTSA 586
A ++ + LY+E S A
Sbjct: 583 AQNVLQQAERLYKEVSAKA 601
>gi|75908863|ref|YP_323159.1| recombination and DNA strand exchange inhibitor protein [Anabaena
variabilis ATCC 29413]
gi|75702588|gb|ABA22264.1| MutS 2 protein [Anabaena variabilis ATCC 29413]
Length = 798
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 308/595 (51%), Gaps = 60/595 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP ++ S++LL QT + + L I+DI L + +L+ E+ A
Sbjct: 36 QIPASQA--ASEQLLEQTKEVYQLESRLASGLSFEGIQDIGDSLERSELQGILAGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L EL+ ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRII--------DNQEDIPILTELVAELRTYPELEQEIHRCIDERGQVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR E ++ + L+ + ++ + + LIT+R R + +KA K
Sbjct: 146 -DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQLITQRGDRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP V N + E AEE AI LT ++A + +
Sbjct: 203 DAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +D+A ARA ++ W+ P + I + + HPLL+
Sbjct: 262 LERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---ITLRQLHHPLLVWQQQHE 318
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
A +P+D+ + RVV ITGPNTGGKT +
Sbjct: 319 QGHAV----------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL- 426
+KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI IL
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410
Query: 427 -------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
E +SLVL+DE+G+GTDP+EG ALA ++LQYL D L V TTH+ +L L
Sbjct: 411 ALGTGDKEEYRPQSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQLTVATTHFGELKAL 470
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G +++++A+ V
Sbjct: 471 KYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEAT 530
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQ 594
E + + L +RR+ E++A A + + LY+E S A+ R Q
Sbjct: 531 DE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQEREQ 580
>gi|161353751|ref|NP_484093.2| recombination and DNA strand exchange inhibitor protein [Nostoc sp.
PCC 7120]
Length = 798
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 307/595 (51%), Gaps = 60/595 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP ++ S++LL QT + + L I DI L + +L E+ A
Sbjct: 36 QIPASQA--ASEQLLEQTKEVYQLESRLASGLSFEGIHDIGDALERSELQGILGGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L EL+ ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRII--------DNQEDIPILTELVAELRTYPELEQEIHRCIDERGQVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR E ++ + L+ + ++ + + LIT+R R + +KA K
Sbjct: 146 -DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQLITQRGDRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP V N + E AEE AI LT ++A + +
Sbjct: 203 DAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +D+A ARA ++ W+ P + I + + HPLL+
Sbjct: 262 LERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---ITLRQLHHPLLVWQQQHE 318
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
A +P+D+ + RVV ITGPNTGGKT +
Sbjct: 319 QGHAV----------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL- 426
+KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI IL
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410
Query: 427 -------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+L + SLVL+DE+G+GTDP+EG ALA ++LQYL D L V TTH+ +L L
Sbjct: 411 ALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQLTVATTHFGELKAL 470
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G +++++A+ V
Sbjct: 471 KYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEAT 530
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQ 594
E + + L +RR+ E++A A + + LY+E S A+ R Q
Sbjct: 531 DE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQEREQ 580
>gi|428218654|ref|YP_007103119.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
gi|427990436|gb|AFY70691.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
Length = 750
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 209/582 (35%), Positives = 316/582 (54%), Gaps = 52/582 (8%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + I+DI L +L ++ V TL N+ +++ + A+ D + LQ +
Sbjct: 64 LTMEGIQDITVPLKRVEKNGMLYAEQLWQVATTLAGARNL-RRIIDNAD-DCEYLQAF-- 119
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
+ ELE+ I CID + +LDRASE L +RA ++ + + +L+ +
Sbjct: 120 ----VSELRTYPELEQDIYRCID-ESGTVLDRASEKLGQLRASSRQVRDRIYGILQNIMQ 174
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ ++ + + +IT+R R + +KA K +P G+ + SS+G T F+EP V NN
Sbjct: 175 R--KSAALQENIITQRSDRYVLSVKAPQKDKIP-GVVHDASSTGMTVFVEPHAIVTANNQ 231
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
+L+ E AE IL L+ ++A+ ++ L+ V EIDLA ARA +A W+ P
Sbjct: 232 LRQLAKQEQAEIEIILRQLSGQVAEVGEDLWRLLAIVTEIDLAIARARYALWLGANAPTF 291
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSS-----LRSLSAASSNS------------------ 315
+ + D++ +IE + SS L+S S NS
Sbjct: 292 I--NFAAPDAATDIESNQKESASQSSDVDQLLQSESDDPGNSQLVEPGDRPATSSLLKKP 349
Query: 316 -NPLKSDVENSEMTVGSLSKGISDFP---------VPIDIKVECETRVVVITGPNTGGKT 365
+ + +D+ +++T+ L + + VP+D+ + E VVVITGPNTGGKT
Sbjct: 350 ASKINADLPPAQLTLRGLKHPLLVWQQQHEQGREVVPVDVLIAPEISVVVITGPNTGGKT 409
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
A++KT GLA+LM+K+G+++PA+ LPWFDL+LADIGD QSL+QNLSTFSGHI RI I
Sbjct: 410 ATLKTFGLAALMAKSGMFVPAREPVELPWFDLVLADIGDEQSLQQNLSTFSGHIKRIGRI 469
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L + ESL+L+DE+G+GTDP+EG A+A ++L+YL L V TTH+ +L LK
Sbjct: 470 LTAATAESLILLDEVGAGTDPTEGSAIAKALLEYLATHACLTVATTHFGELKTLKYNHAC 529
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENAA EF L PTYR+ WG G SNAL IA +GF +I+++AQ V E
Sbjct: 530 FENAAVEFDDVKLAPTYRLQWGIPGRSNALAIAARLGFPAEILEQAQDHVGFGSAEL--- 586
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ + L +RRK E + + A+ L A+ LY E S A+
Sbjct: 587 --NTVIADLEGQRRKHEDKLKQASKLLAQTEHLYVEISKKAA 626
>gi|254412960|ref|ZP_05026732.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180124|gb|EDX75116.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 820
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 215/604 (35%), Positives = 312/604 (51%), Gaps = 81/604 (13%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+L ES LL QT L + I+DI L A +LS ++ A+ TL
Sbjct: 40 TLAESLHLLAQTKEVYQLECQLTSGWTFEGIQDIGDALERAERQGILSGEDLLAIATTLA 99
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
V + + + + ++ P+L +L+ + ELE++I CID + + DRAS
Sbjct: 100 GVRRLRRLIDDQEDI---------PVLNQLVADIRTYPELEQEIHRCIDERGDVT-DRAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L IR K + + L+ + + Q G + +PLIT+R R + +KA K +
Sbjct: 150 PKLAEIRQHSKSLRDRIYQTLQNIVQR--QGGALQQPLITQRGDRFVLPVKAPQKDSV-S 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + SS+GAT ++EP V N E AE A+ +LT ++A + +++ ++
Sbjct: 207 GIVHDASSTGATLYIEPHAIVGLGNQLKTYQRREQAEAEAVRRVLTEQVAAVKPDLEQVL 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+DLA A+A ++ W+ P + SI + ++HPLL+
Sbjct: 267 AVATRLDLATAKARYSLWLQANPPRFIDPNQ---RESITLRQLRHPLLVWQ--------- 314
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTL 371
++ E D PV PI I+++ + +VV ITGPNTGGKT ++KTL
Sbjct: 315 ---------YQHEE-----------DAPVVPITIQIQPQIKVVAITGPNTGGKTVTLKTL 354
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE---- 427
GLA+LM+K GL++PAK LPWF+ ILADIGD QSLEQ+LSTFSGHI RI ILE
Sbjct: 355 GLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSLEQSLSTFSGHIRRISRILEELEN 414
Query: 428 ---------------LVSRE--------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
L RE +LVL+DEIG+GTDP+EG ALA ++L YL D
Sbjct: 415 CRAPWRVSTDGGEDDLAQREPDTPHPTSALVLLDEIGAGTDPAEGSALAIALLNYLADHA 474
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L V TTHY +L LK +D RFENA+ EF+ TL PTYR+LWG G SNAL IA+ +G
Sbjct: 475 QLTVATTHYGELKALKYQDERFENASVEFNDVTLSPTYRLLWGIPGRSNALTIAERLGLK 534
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDST 584
++ AQ LV + Q + L +RR E++A+ A L + L++E S+
Sbjct: 535 SDVVSLAQTLVGGSSEDVNQ-----VISGLEAQRRDQETKAQEANQLLQQTERLHQEVSS 589
Query: 585 SASI 588
A +
Sbjct: 590 KAKL 593
>gi|427712156|ref|YP_007060780.1| MutS2 family protein [Synechococcus sp. PCC 6312]
gi|427376285|gb|AFY60237.1| MutS2 family protein [Synechococcus sp. PCC 6312]
Length = 817
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 309/574 (53%), Gaps = 58/574 (10%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+L +SQ+LL QT A L + LD S I++I LN A +L+P E+ + +T
Sbjct: 64 NLRDSQQLLAQTEDAYKLTTYYLRELDFSQIKNIQSGLNRAAHQGVLTPEELLGIAQTQA 123
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
N+ + + DS S L LL +LE++I CI + + +RAS
Sbjct: 124 GSRNLRRVV--------DSYPDLSALQALLAALRTFPQLEQEIHRCI-TEQGEVSERASP 174
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L IR + ++ M + + + +IT+R R + +KA + +P G
Sbjct: 175 QLAAIR-QHQQQMRGQIHQQLQQII-QRKHSSLQDTVITQRAERYVLPVKAPQRDAIP-G 231
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I +VS +GAT ++EP+ VE NN +L+ EE I +L+ ++ + E++ ++
Sbjct: 232 IVHDVSVTGATLYIEPQAIVELNNRLRQLARQGGQEEYRIREVLSQQVTEVVLELQQGLE 291
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++DLA ARA + W++ P V D I++ ++HPLL+
Sbjct: 292 LITQLDLAVARARYGLWLNANIPRF-----VELDEPIHLRNLRHPLLIWQH-------HQ 339
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
P TV VPI + + T+VV ITGPNTGGKTA++KTLGL
Sbjct: 340 EQGP----------TV-----------VPITVDIAPPTKVVTITGPNTGGKTATLKTLGL 378
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE- 432
+LM+KAGL +PA LPWF +LADIGD QSL+ NLSTFSGHI I +ILE ++ E
Sbjct: 379 VALMAKAGLMIPAAEPVELPWFRQVLADIGDEQSLQHNLSTFSGHIRTISEILEALTTEA 438
Query: 433 -----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+LVL+DE+G+GTDPSEG ALA ++L +L D+ + + TTHY +L LK +D RFE
Sbjct: 439 NPDNAALVLLDEVGAGTDPSEGTALAIALLTHLADQAQITIATTHYGELKALKYQDPRFE 498
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETL PTYR+LWG G SNAL IA+ +G + +I A + + Q +
Sbjct: 499 NASVEFDSETLAPTYRLLWGIPGRSNALAIAQRLGLNPDVIAAAAQAL-----PADQDQV 553
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+++ L +RR E++A TA+ L + L++E
Sbjct: 554 NQVIAGLEAQRRHQEAKASTASQLLSATEKLHQE 587
>gi|318042364|ref|ZP_07974320.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0101]
Length = 861
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 293/543 (53%), Gaps = 66/543 (12%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
++P SL+ SQ+LL QT+ LA+ + L + D+ + G + E+
Sbjct: 88 ELPLAPSLKASQELLAQTAELLALDGLTEGGLSFQGVADLRRTVQLCAKGGVAGADELLD 147
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
V TL + +++ +A P+ +++ L ELE+++ FCI+ +
Sbjct: 148 VATTLATARRLRRQIDDA---------ELRPVTTAMVEGLRTLPELEQRLRFCIEDGGRV 198
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L +R + R+ + L+ LL++ AA + + +I +R R + +
Sbjct: 199 A-DRASSPLAQLRRQIASARQERRDRLNDLLRRYAALLQDS------VIAERNGRPVLAV 251
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA LP G+ + S+SG+T F+EP+ + N +L E A+L L+A +
Sbjct: 252 KAGLAGQLP-GLVHDSSASGSTVFIEPQAVIPLGNRLRQLEGEAREAERAVLQELSALVG 310
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ +++L +L++D A ARA + W+ V P L + + + +EG++HPLLL
Sbjct: 311 DEQAALEHLQQVLLQLDAALARARYGAWLGAVRPELVADPL----APLRLEGLRHPLLLW 366
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
R ++P+ VP+ ++V RVV ITGPNTG
Sbjct: 367 QERRE------GTHPV----------------------VPVSVRVHEGLRVVAITGPNTG 398
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++K++GLA+LM++AGL+LP P+LPW +LADIGD QSL+QNLSTFSGH+ RI
Sbjct: 399 GKTVTLKSVGLAALMARAGLFLPCSGTPQLPWCAQVLADIGDEQSLQQNLSTFSGHVRRI 458
Query: 423 VDILELVSR----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
ILE + SLVL+DE+G+GTDP+EG ALA ++L+ L +R L + TTH
Sbjct: 459 ARILEALPPAAADLGAAPGASLVLLDEVGAGTDPTEGTALAIALLRQLAERARLTIATTH 518
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ +L LK D RFENA+ F +ETL PTY + WG G SNAL IA +G D ++++ AQ
Sbjct: 519 FGELKALKYNDARFENASVAFDVETLSPTYHLQWGIPGRSNALAIASRLGLDGQVLEEAQ 578
Query: 533 KLV 535
+L+
Sbjct: 579 QLL 581
>gi|428301815|ref|YP_007140121.1| MutS2 protein [Calothrix sp. PCC 6303]
gi|428238359|gb|AFZ04149.1| MutS2 protein [Calothrix sp. PCC 6303]
Length = 796
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 323/593 (54%), Gaps = 56/593 (9%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G + QIP ++ +S+ LL QT + S L I+DI + A
Sbjct: 30 LGAIASRNLQIPTSQA--QSENLLAQTQEIYKLESRISPGLSFEGIQDIGDAIERAALQG 87
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+L+ E+ A+ TL N+ + + D+ + LL+L+ + E+E++I
Sbjct: 88 ILAGEELLAIATTLAGTRNLRRII--------DNQEDLPILLDLVADLRTYPEIEQEIHR 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+D + I DRAS+ L IRAE +++ + L+ + ++ + + +IT+R R
Sbjct: 140 CVDERGQIA-DRASQKLGDIRAELRKSRSQIIQKLQNILQ--VKSNAVQENVITQRGDRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +KASHK ++ GI + S+SG T ++EP V N +L E EE I LT
Sbjct: 197 VIPVKASHKDVI-HGIVHDTSTSGVTLYIEPNSVVPMGNQLRQLIRKEEIEEEVIRRQLT 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
A++A + +++ L+ V +DLA A++ ++ W+ P + + +I + ++HP
Sbjct: 256 AQVADIKDDLERLLAIVTTLDLATAKSRYSFWLKANPPRFVDRE---ANETITLRKLRHP 312
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + E+ +P+D+ ++ ETRVV ITG
Sbjct: 313 LLEWQHQHE---------------QGHEV-------------IPVDLVIQPETRVVTITG 344
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT ++KTL LA+LM+K GL++PA+ LPWF+ +LADIGD QSL+Q+LSTFSGH
Sbjct: 345 PNTGGKTVTLKTLALAALMAKVGLFVPAREPVELPWFEQVLADIGDEQSLQQSLSTFSGH 404
Query: 419 ISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
I RI IL ++ + SLVL+DE+G+GTDP EG ALA ++L +L + V L + +TH+
Sbjct: 405 IRRISRILNAITGDTVTPSLVLLDEVGAGTDPVEGSALAIALLHHLANHVLLTMASTHFG 464
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L LK +D RFENA+ EF TL PTY++LWG G SNAL IA+ +G +I+ A++
Sbjct: 465 ELKALKYQDERFENASVEFDDATLSPTYKLLWGIPGRSNALAIAQRLGLSVDVIEAAKQQ 524
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ E +E+ L +RR+ E++A A +L + LY+E S A+
Sbjct: 525 MGGANDE-----VNEVIAGLEAQRRRQETKASEAQNLLHQAEKLYKEVSAKAT 572
>gi|87301320|ref|ZP_01084161.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
gi|87284288|gb|EAQ76241.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
Length = 800
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 289/537 (53%), Gaps = 61/537 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P ES +LL +TS L + + L D+ G L G ++ AV
Sbjct: 37 LPLAADRSESLRLLAETSELLGLDGLIEGGLSFQGAADLTGTLRHCAKGGTAGGEDLLAV 96
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
T +AV ++ EA EL P+ +L+ + L ELE+++ FC++ + +
Sbjct: 97 AST-QAVARRLRRQIEAPEL--------RPVCSQLMGDLRTLPELEQRLRFCLE-EGGRV 146
Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
DRAS +L +R + R+ + L L+++ Q G + +I +R R + +K
Sbjct: 147 ADRASPELAGLRQQLAGLRQLRRDRLQELMRR------QGGLLQDSVIAERNGRPVLAVK 200
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
+ LP G+ + S+SG+T F+EPK + N L E EE +L+ L+A +A+
Sbjct: 201 VTAASQLP-GLVHDSSASGSTVFIEPKAVITLGNQIRELEGRERQEEWRVLASLSALVAE 259
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ L ++ +D+A ARA + QW+ V P LS+ + + + ++HPLLL
Sbjct: 260 EAPALEELHRVLVALDVALARARYGQWLGAVRPELSADPQ----APVLLRDLRHPLLLWQ 315
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
R E V VP+ + V E RVV ITGPNTGG
Sbjct: 316 ERR-----------------GGEAKV-----------VPVTVSVGAELRVVAITGPNTGG 347
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K++GLA+LM++AGL+LP P+LPW L+LADIGD QSL+QNLSTFSGH+ RI
Sbjct: 348 KTVTLKSVGLAALMARAGLFLPCSGTPQLPWCSLVLADIGDEQSLQQNLSTFSGHVRRIA 407
Query: 424 DILELVSRE-----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
ILE + +LVL+DE+G+GTDP+EG ALA ++L++L +R L + TTH+ +L
Sbjct: 408 RILEALDAPAAPGATLVLLDEVGAGTDPTEGTALAIALLRHLAERARLTIATTHFGELKA 467
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
LK D+RFENA+ F +TL PTY + WG G SNAL IA +G D+ +I A L+
Sbjct: 468 LKYADSRFENASVAFDSDTLSPTYHLQWGIPGRSNALAIASRLGLDQAVIAEANGLL 524
>gi|119512341|ref|ZP_01631426.1| MutS 2 protein [Nodularia spumigena CCY9414]
gi|119462992|gb|EAW43944.1| MutS 2 protein [Nodularia spumigena CCY9414]
Length = 770
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 295/574 (51%), Gaps = 79/574 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L I+DI L A +L+ E+ A+ TL N+ + + D+ +
Sbjct: 18 LSFEGIQDIGDSLERAELSGILAGDELLAIATTLAGTRNLRRVI--------DNQEDLPT 69
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L +L+ + ELE++I CID + + DRAS L IR E + + S + +
Sbjct: 70 LADLVADLRTYPELEQEIHRCIDERGQVT-DRASLKLGEIRTE----LRKIRSQITQKLH 124
Query: 159 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
I QA G + + +IT+R R + +KA K +P GI + S+SGAT ++EP V F
Sbjct: 125 NILQAKSGAVQEQIITQRGDRYVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPFG 183
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + E EE AI LT ++A+ + +++ L+ V +DLA ARA ++ W+ P
Sbjct: 184 NQLRQTIRREQTEEEAIRRSLTQKVAEVKPDLERLLAIVTTLDLATARARYSFWLGANPP 243
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + I + ++HPLL+ A
Sbjct: 244 RFINRED---NEMITLRQLRHPLLVWQQQHEHGQAV------------------------ 276
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+ + RVV ITGPNTGGKT S+KTL LA+LM+K GL++PA+ +PWF+
Sbjct: 277 ----VPVDLLISPHLRVVTITGPNTGGKTVSLKTLALAALMAKVGLFVPAREPVEIPWFE 332
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES----------------------- 433
+LADIGD QSL+Q+LSTFSGHI RI IL + +E
Sbjct: 333 QVLADIGDEQSLQQSLSTFSGHIRRISRILNALDQEEESENISLSPDSPHSPHTPHTPHT 392
Query: 434 ----LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
LVL+DE+G+GTDP EG ALA ++LQYL + L + TTH+ +L LK +D RFENA
Sbjct: 393 PHSSLVLLDEVGAGTDPVEGSALAIALLQYLANHAQLTIATTHFGELKALKYEDERFENA 452
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF TL PTYR+LWG G SNAL IA+ +G ++I +A+ V E Q
Sbjct: 453 SVEFDESTLSPTYRLLWGIPGRSNALTIARRLGLKPEVITQAKTQVGGATDEVNQ----- 507
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREDS 583
+ L +RR+ E++A A SL + LY+E S
Sbjct: 508 VIAGLEAQRRRQETKAAEAQSLLQQAERLYKEVS 541
>gi|443312975|ref|ZP_21042589.1| MutS2 family protein [Synechocystis sp. PCC 7509]
gi|442777125|gb|ELR87404.1| MutS2 family protein [Synechocystis sp. PCC 7509]
Length = 792
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 204/592 (34%), Positives = 314/592 (53%), Gaps = 56/592 (9%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
+G + QIP S +S++LL QT L + L I+DI + A
Sbjct: 27 LGSIAARNLQIP--ASQLQSEELLAQTKEVYDLETRLTTGLAFDGIQDIGDSVERAQLQG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
+L+ +E+ + TL + + + ++ P+L +L+ ELE++I
Sbjct: 85 ILAGNELLEIATTLFGARQLRRFIDNQPDI---------PVLTQLVSELRTYPELEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
CID + + DR+S L +R + K+ ++ L+ + + QA + + +IT+R R
Sbjct: 136 RCIDERGQVT-DRSSPILGDLRTQIKQLRTQINRSLQNILQR--QANAVQEQIITQRGDR 192
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ +KA K +P GI + S+SGAT ++EP G V N +L E EE AI L
Sbjct: 193 FVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPSGVVPLGNQLRQLVRKEQVEEEAIRRTL 251
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T +A+ +++ L+ IDLA ARA ++ W+ P +++ IN+ ++H
Sbjct: 252 TKLVAEVSEDLERLLAIATTIDLATARARYSFWLKANPPRFINRNDGEM---INLRQLRH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL+ + N VP+D+ ++ RVV IT
Sbjct: 309 PLLVWQQ-----QHEQDRNV-----------------------VPVDLFIQPNIRVVTIT 340
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWF+ +L DIGD QSLEQ+LSTFSG
Sbjct: 341 GPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQVLTDIGDEQSLEQSLSTFSG 400
Query: 418 HISRIVDILELVSR--ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
HI RI IL + + SLVL+DE+G+GTDP EG ALA S+L YL + L++ TTH+ +
Sbjct: 401 HIRRISRILTAIDKSGSSLVLLDEVGAGTDPVEGSALAISLLHYLANNAQLSIATTHFGE 460
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA+ +G ++I+ A+K +
Sbjct: 461 LKALKYQDDRFENASVEFDEISLSPTYRLLWGIPGRSNALTIAERLGLKLEVIEEAKKHL 520
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ Q + L +R++ E++A A L + Y+E S A+
Sbjct: 521 GGANDDVNQ-----VIAGLEAQRKRQETKATEAQKLLEQAERFYQEVSAKAA 567
>gi|56750922|ref|YP_171623.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 6301]
gi|56685881|dbj|BAD79103.1| DNA mismatch repair protein MutS [Synechococcus elongatus PCC 6301]
Length = 796
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 302/535 (56%), Gaps = 59/535 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P S ES+ LL+QT+ A A+ + P L + + DI L +LS E+ +
Sbjct: 40 LPLASSQAESEYLLSQTAEAQALELTLPQGLPFAGVFDIGEALARVERQAVLSGEELLQI 99
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
TL A+ + ++L +AAE +P L+ ++ + ELE++I FCI+ +
Sbjct: 100 ASTLAAMRQL-RRLIDAAE--------AAPTLQAIVADLRTYPELEQQIHFCIEDSGEVA 150
Query: 128 LDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
DRAS+ L IR ++++ ++ L+ LL+ + +FQ + +I++R R + +K
Sbjct: 151 -DRASDALLGIRQQQRQVRSQILDRLNRLLRN-QSNLFQ-----ELVISRRSDRYVLPVK 203
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A K +P GI + SSSG+T ++EP+G +E NN +L E E A+ L+ IA
Sbjct: 204 AGQKEAVP-GIVHDSSSSGSTLYIEPRGVIELNNQLRQLQRREEVECEAVRRRLSEAIAS 262
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+++ L+ +DLA ARA + ++ P ++ S SI + ++HPLLL
Sbjct: 263 VSGDLETLLAIATTLDLAVARARYGLHLEANRPRFTASSE-----SICLRQLRHPLLLWQ 317
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ D + S VP+ +++ +VV ITGPNTGG
Sbjct: 318 Q--------------RQDPDRSV--------------VPVSFQLQPSLKVVAITGPNTGG 349
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K+LGLA LM++AGL++PA+ LPWF+ IL DIGD QSL+Q+LSTFSGHI RI
Sbjct: 350 KTVTLKSLGLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIG 409
Query: 424 DILEL--VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE V+ SLVL+DE+G+GTDPSEG ALA ++L+YL D L + TTHY +L LK
Sbjct: 410 RILEALPVAGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATLTIATTHYGELKALKY 469
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
+D RFENA+ EF TL PTYR+LWG G SNAL IA+ +G ++ A+ +E
Sbjct: 470 QDDRFENASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLE 524
>gi|81299422|ref|YP_399630.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 7942]
gi|81168303|gb|ABB56643.1| MutS2 family protein [Synechococcus elongatus PCC 7942]
Length = 796
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 302/535 (56%), Gaps = 59/535 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P S ES+ LL+QT+ A A+ + P L + + DI L +LS E+ +
Sbjct: 40 LPLASSQAESEYLLSQTAEAQALELTLPQGLPFAGVFDIGEALARVERQAVLSGEELLQI 99
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
TL A+ + ++L +AAE +P L+ ++ + ELE++I FCI+ +
Sbjct: 100 ASTLAAMRQL-RRLIDAAE--------AAPTLQAIVADLRTYPELEQQIHFCIEDSGEVA 150
Query: 128 LDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
DRAS+ L IR ++++ ++ L+ LL+ + +FQ + +I++R R + +K
Sbjct: 151 -DRASDALLGIRQQQRQVRSQILDRLNRLLRN-QSNLFQ-----ELVISRRSDRYVLPVK 203
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A K +P GI + SSSG+T ++EP+G +E NN +L E E A+ L+ IA
Sbjct: 204 AGQKEAVP-GIVHDSSSSGSTLYIEPRGVIELNNQLRQLQRREEVECEAVRRRLSEAIAS 262
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+++ L+ +DLA ARA + ++ P ++ S SI + ++HPLLL
Sbjct: 263 VSGDLETLLAIATTLDLAVARARYGLHLEANRPRFTASSE-----SICLRQLRHPLLLW- 316
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P +S VP+ +++ +VV ITGPNTGG
Sbjct: 317 --------QQRQDPDRS-------------------VVPVSFQLQPSLKVVAITGPNTGG 349
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K+LGLA LM++AGL++PA+ LPWF+ IL DIGD QSL+Q+LSTFSGHI RI
Sbjct: 350 KTVTLKSLGLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIG 409
Query: 424 DILEL--VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE V+ SLVL+DE+G+GTDPSEG ALA ++L+YL D L + TTHY +L LK
Sbjct: 410 RILEALPVAGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATLTIATTHYGELKALKY 469
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
+D RFENA+ EF TL PTYR+LWG G SNAL IA+ +G ++ A+ +E
Sbjct: 470 QDDRFENASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLE 524
>gi|434384820|ref|YP_007095431.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
gi|428015810|gb|AFY91904.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
Length = 843
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 310/600 (51%), Gaps = 102/600 (17%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L L IED L A +LS E+ + TL + + + + DS +
Sbjct: 66 LSLDGIEDFGDALERAAVQGMLSGKELHEIATTLAGMRKLRRTI--------DSEENIPV 117
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
L L+ + ELE+ I CID + + DR+SE L +R + R R + L+SL++
Sbjct: 118 LQGLVADVRTYPELEQDIYHCIDDRGDVT-DRSSEKLAQVRVQLKGLRDRIYKFLNSLIQ 176
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ Q+ I +PLIT+R R + +KASHK +P G+ + S SG+T ++EP+ +
Sbjct: 177 R------QSNAIQQPLITQRGDRFVIPVKASHKDAIP-GVVHDSSGSGSTLYVEPQQIIN 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N +L E E A+L LTA++ + ++++L+ IDLA A+A ++ W++
Sbjct: 230 LGNQLRQLQRQEQREIEAVLMALTAKVTEVVEDLEHLLVVATTIDLATAKARYSLWLEAN 289
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P ++ + I + ++HPLL+ +P+
Sbjct: 290 PPRFVDRAASEY---ITLRQLRHPLLI------WKHRHEEGSPV---------------- 324
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VPID+ + + RVV ITGPNTGGKT ++KTL + +LM+K GL++PA+ +PW
Sbjct: 325 ------VPIDLSIRPDIRVVTITGPNTGGKTVTLKTLAIVALMAKVGLFIPAREPVEIPW 378
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------------------------- 429
FDLILADIGD QSL+Q+LSTFSGHI RI IL+ +
Sbjct: 379 FDLILADIGDEQSLQQSLSTFSGHIRRIGRILDAIGEEGGERGAGSTSTTLSVSGGDEEM 438
Query: 430 ----------------------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
+ SL+L+DE+G+GTDP+EG ALA ++LQYL DR L
Sbjct: 439 GSVRDDEETIDLQVSHSPIHPSTPSSLILLDEVGAGTDPAEGSALAIALLQYLADRAMLT 498
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ +THY +L LK +D+RFENA+ EF L PTYR+LWG G SNAL+IA+ +G + ++
Sbjct: 499 IASTHYGELKALKYQDSRFENASVEFDDVNLAPTYRLLWGIPGRSNALSIAQRLGLNPEV 558
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
I+ A+ V + Q+ +E+ L +RR E++A AA++ + Y E S A+
Sbjct: 559 IENAKSQV--ILGATQE--VNEVIAGLEAQRRTQETKASEAANVLKQAEAFYLEVSQKAA 614
>gi|17135027|dbj|BAB77573.1| DNA mismatch repair protein [Nostoc sp. PCC 7120]
Length = 678
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 268/492 (54%), Gaps = 48/492 (9%)
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
ELE++I CID + + DRAS L IR E ++ + L+ + ++ + + L
Sbjct: 9 ELEQEIHRCIDERGQVT-DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQL 65
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
IT+R R + +KA K +P GI + S+SGAT ++EP V N + E AEE
Sbjct: 66 ITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEE 124
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
AI LT ++A + +++ L+ V +D+A ARA ++ W+ P + I
Sbjct: 125 EAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---I 181
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+ + HPLL+ A +P+D+ +
Sbjct: 182 TLRQLHHPLLVWQQQHEQGHAV----------------------------IPVDLLISPH 213
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q
Sbjct: 214 IRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQ 273
Query: 411 NLSTFSGHISRIVDIL--------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
+LSTFSGHI RI IL +L + SLVL+DE+G+GTDP+EG ALA ++LQYL D
Sbjct: 274 SLSTFSGHIRRISRILNALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLAD 333
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L V TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA +G
Sbjct: 334 HAQLTVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLG 393
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRED 582
+++++A+ V E + + L +RR+ E++A A + + LY+E
Sbjct: 394 LKAEVVEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEV 448
Query: 583 STSASISVYRYQ 594
S A+ R Q
Sbjct: 449 SNKAAALQEREQ 460
>gi|16330262|ref|NP_440990.1| recombination and DNA strand exchange inhibitor protein
[Synechocystis sp. PCC 6803]
gi|383322003|ref|YP_005382856.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325172|ref|YP_005386025.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491056|ref|YP_005408732.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384436323|ref|YP_005651047.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|451814420|ref|YP_007450872.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
gi|3914083|sp|P73625.1|MUTS2_SYNY3 RecName: Full=MutS2 protein
gi|1652751|dbj|BAA17670.1| DNA mismatch repair protein; MutS [Synechocystis sp. PCC 6803]
gi|339273355|dbj|BAK49842.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|359271322|dbj|BAL28841.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274492|dbj|BAL32010.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277662|dbj|BAL35179.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407958177|dbj|BAM51417.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|451780389|gb|AGF51358.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
Length = 822
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 205/592 (34%), Positives = 307/592 (51%), Gaps = 72/592 (12%)
Query: 18 EESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EES++LL QT A ++ S I DI L G L++ E+ A+ TL V
Sbjct: 49 EESRELLAQTQAVESIENSPESNWHFKGIADITEPLARVERGGLVTGLELLAIAGTLAGV 108
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
+ + + E +L+ L L+ L ELE+ I C+ D K + +RAS
Sbjct: 109 RRLRRVIEERDDLEI--------LQTLVAEVRTLPELEQAIHHCLGEDGK---VAERASP 157
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L IR + K E + L+K+ + Q+ + + +IT+R R + IKA +K +P G
Sbjct: 158 KLGEIRQKLKAVREQIQQKLQKIIQR--QSNALQEAVITQRGDRFVLPIKAGYKEQMP-G 214
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T ++EP+ VE N + E EE IL L+ ++ + ++++L+
Sbjct: 215 IVHDSSASGNTLYVEPQAIVELGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLA 274
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+DLA AR ++ W+ P + + I + ++HPLL + + A
Sbjct: 275 IATRLDLATARVRYSFWLGAHPPQWLTPGD---EKPITLRQLRHPLLHWQAEKEGGPAV- 330
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPI + ++ + RV+ ITGPNTGGKT ++KTLGL
Sbjct: 331 ---------------------------VPITLTIDSQIRVIAITGPNTGGKTVTLKTLGL 363
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR-- 431
+LM+K GLY+PAK +PWF ILADIGD QSL+QNLSTFSGHI RI+ IL+ +
Sbjct: 364 VALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQNLSTFSGHICRIIRILQALPSGV 423
Query: 432 ----------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
SLVL+DE+G+GTDP+EG ALA ++L++L D+ L V TTHY +
Sbjct: 424 QDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALAIALLRHLADQPCLTVATTHYGE 483
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF ++L PTYR+LWG G SNAL IA+ +G I+++A+ +
Sbjct: 484 LKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRSNALAIAQRLGLPLAIVEQAKDKL 543
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ Q + L +RR+ E +A A L E Y++ S A+
Sbjct: 544 GGFSEDINQ-----VIAGLESQRREQEQKAANAQKLLQETEIFYQQVSQKAA 590
>gi|254432766|ref|ZP_05046469.1| MutS2 family protein [Cyanobium sp. PCC 7001]
gi|197627219|gb|EDY39778.1| MutS2 family protein [Cyanobium sp. PCC 7001]
Length = 804
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 246/443 (55%), Gaps = 48/443 (10%)
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 157
L+ L ELE+++ F ++ + + DRAS LE +R + R E L LL++ A
Sbjct: 122 LVAELRTLPELEQRLHFALE-EGGRVADRASAPLEAVRRQLKGLRAERRERLQELLRRHA 180
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ +I +R R + +KA LP G+ + S+SG+T F+EP+ + N
Sbjct: 181 PLL------QDTVIAERNGRPVLAVKAGAAAQLP-GLVHDSSASGSTVFVEPQAVISLGN 233
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E A+L+ L+A + ++ L +L +D A ARA + W+ V P
Sbjct: 234 RLRDLEGRERELEQAVLAELSALVGAEAEALQQLHAVLLRLDAALARARYGAWLGAVRPD 293
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L + H F ++ + HPLLL R A
Sbjct: 294 LEADPHAPF----SLVDLSHPLLLWQQRREQGHAV------------------------- 324
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ I V E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP PRLPW
Sbjct: 325 ---VPVSITVGAELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCSGTPRLPWCGA 381
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALA 453
+LADIGD QSL+QNLSTFSGHI RI IL ++ +LVL+DE+G+GTDP EG ALA
Sbjct: 382 VLADIGDEQSLQQNLSTFSGHIRRIARILAALAEPRQGATLVLLDEVGAGTDPVEGSALA 441
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
T++L++L DR L + TTH+ +L LK D RFENA+ F ++TL PTYR+ WG G SN
Sbjct: 442 TALLRHLADRARLTIATTHFGELKALKYADPRFENASVAFDVDTLSPTYRLQWGIPGRSN 501
Query: 514 ALNIAKSIGFDRKIIQRAQKLVE 536
AL IA+ +G ++++AQ L+E
Sbjct: 502 ALAIAQRLGLSEAVLEQAQALLE 524
>gi|427733731|ref|YP_007053275.1| MutS2 family protein [Rivularia sp. PCC 7116]
gi|427368772|gb|AFY52728.1| MutS2 family protein [Rivularia sp. PCC 7116]
Length = 817
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/596 (33%), Positives = 305/596 (51%), Gaps = 76/596 (12%)
Query: 19 ESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
ES+ LL QT + + I+D L A +L+ E+ A+ TL +
Sbjct: 43 ESEYLLAQTKEVYELENRLDNGISFEGIQDFGDSLERAELKGILAGDELLAIATTLAGIR 102
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ + + +L+ L EL+ + ELE++I CID + + DRASE L
Sbjct: 103 NLRRLIDNHPDLE--------ILNELVADLRTYPELEKEIHRCIDERGQVT-DRASEKLG 153
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR +++ + L+ + +A + + +IT+R R + +KA K +P GI
Sbjct: 154 DIRNSLRQSRSQITRKLQNIIQ--VKANALQETIITQRSDRFVIPVKAPQKDAIP-GIVH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT ++EP V N +L E EE AI L+ ++A+ + +++ L+
Sbjct: 211 DTSTSGATLYVEPNSIVPMGNQLRQLLRREQVEEEAIRRKLSEQVAEVKLDLEKLLAVAT 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+DLA A+A ++ W+ P S + +I + ++HPLL+
Sbjct: 271 TLDLATAKARYSFWLKANPPRFIQPS----EENITLRELRHPLLVWQ------------- 313
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ + E+ +P+++ + RVV ITGPNTGGKT ++KTLG A+L
Sbjct: 314 --QQHEQGHEV-------------IPVNLVIHPYIRVVTITGPNTGGKTVTLKTLGFATL 358
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----- 431
M+K GL++PA+ LPWFD +LADIGD QSLEQ+LSTFSGHI RI IL+ VS
Sbjct: 359 MAKIGLFVPAREPVELPWFDRVLADIGDEQSLEQSLSTFSGHIRRISRILDAVSHVKVEE 418
Query: 432 --------------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
SLVL+DE+G+GTDP EG ALA ++L+YL D L + TT
Sbjct: 419 AQTAEKAEQEENTSLPSPTPSSLVLLDEVGAGTDPVEGSALAIALLRYLADNSMLTIATT 478
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
H+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA +G +++++A
Sbjct: 479 HFGELKALKYQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVVEKA 538
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ + E Q + L +RR+ E +A A L + Y+E S A+
Sbjct: 539 KDEMGGATDEVNQ-----VIAGLEAQRRRQEEKATQAQDLLQQAERFYKEVSAKAA 589
>gi|148241412|ref|YP_001226569.1| mismatch repair ATPase [Synechococcus sp. RCC307]
gi|147849722|emb|CAK27216.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. RCC307]
Length = 793
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 289/536 (53%), Gaps = 59/536 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+ +LEE+Q+ +T+ L + LS G+ + +++ QL S
Sbjct: 36 LQLAPTLEEAQRRQTETTELLVLDGLTEGGLS----FQGVSDHSITVQLCSKGGCAGADE 91
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
L+ + + ++D D L+ + LL+ L ELE+++ F I+ + + DR
Sbjct: 92 LLQLADTLAAARRLRRQIDDDELRPVTT--ALLEGLRTLPELEQQLRFAIE-EGGRVADR 148
Query: 131 ASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
AS L +R ++R+ L L+++ A Q+ +I +R R + +KA
Sbjct: 149 ASPPLAGLRRQLQSQRQERQSRLQELMRRWANQL------QDSVIAQRHGRPVLAVKAGA 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
L G + S+SG T F+EP+ V N L E EE +L L+A +A
Sbjct: 203 AGSL-QGQVHDSSASGNTLFIEPQAVVGLGNRIAELEAQEQKEERRVLLQLSAAVAAEGD 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ + D + ++DL ARA + W+ + P L ++S ++ ++HPLL+ +
Sbjct: 262 SLMAMQDCLAQLDLGLARARYGAWLGAIKPKLGTESW-------QLKDLRHPLLVWQERQ 314
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
A VP+ +++E RVV ITGPNTGGKT
Sbjct: 315 EAGTAV----------------------------VPVSLQIEPPLRVVAITGPNTGGKTV 346
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++K+LGLA+LM+++GL+LP P+LPW + +LADIGD QSL+QNLSTFSGH+ RI IL
Sbjct: 347 TLKSLGLATLMARSGLFLPCSGTPQLPWCEAVLADIGDEQSLQQNLSTFSGHVRRIARIL 406
Query: 427 ELVSR------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
E +SR +LVL+DE+G+GTDPSEG ALAT++L++L D+V L+V TTH+ +L LK
Sbjct: 407 EALSRLGAAPVPALVLLDEVGAGTDPSEGAALATALLRHLADQVQLSVATTHFGELKALK 466
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
D+RFENA+ EF +LRPTYR+LWG G SNAL +A+ +G ++ A++L++
Sbjct: 467 YDDSRFENASVEFDEVSLRPTYRLLWGIPGRSNALAVARRLGLSEAVLGGAEQLMD 522
>gi|124022099|ref|YP_001016406.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9303]
gi|123962385|gb|ABM77141.1| putative DNA mismatch repair protein MutS family protein
[Prochlorococcus marinus str. MIT 9303]
Length = 828
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 276/505 (54%), Gaps = 57/505 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ IL G + S E+ AV TL A + +++ + P
Sbjct: 102 LSFQGVHDLGHILARCTKGGVASGEELLAVADTLAAARRLRRQINDP---------ELRP 152
Query: 99 LLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLL 153
+ LL + + ELE ++ F ++ + + DR S L +R + R+ + L ++
Sbjct: 153 TISALLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVI 211
Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
++ AA + +I R R + +KA+ LP G+ + S+SG+T F+EP+ +
Sbjct: 212 RRHAAML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVI 264
Query: 214 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N L ++ +L+ L+A +A+S I L + +L++DLA AR + QW+ G
Sbjct: 265 TLSNRLAELDGHIREQQQLVLAELSAAVAESGVSISRLGEVLLQLDLALARGRYGQWLGG 324
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
V P L +++ F +++ ++HPLL+ R E+ E V
Sbjct: 325 VPPALHAEAAAPF----SLQELRHPLLVWQHRR----------------EHGEAVV---- 360
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
PI ++V +VV ITGPNTGGKT ++K++GLA LM++AGL LP P +P
Sbjct: 361 --------PISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMP 412
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGV 450
W +LADIGD QSL+QNLSTFSGH+ RI ILE + +LVL+DE+G+GTDPSEG
Sbjct: 413 WCAQVLADIGDEQSLQQNLSTFSGHVKRIGRILEALIEGPGPALVLLDEVGAGTDPSEGT 472
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALAT++L+ L DR L + TTH+ L LK D+RFENA+ F ET+ PTYR+ WG G
Sbjct: 473 ALATALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDSETMLPTYRLQWGIPG 532
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLV 535
SNAL+IA +G D +I +AQ+L+
Sbjct: 533 RSNALSIAMRLGLDDAVIAQAQELL 557
>gi|317968912|ref|ZP_07970302.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0205]
Length = 811
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 290/546 (53%), Gaps = 64/546 (11%)
Query: 6 VQKAQIPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPS 63
V A++P + ++S L +T+ LA+ + L D+ L G + S
Sbjct: 37 VVAARLPLATTRQQSVDWLAETTELLALDGLIEGGLSFQGAADLDHTLQLCAKGGVASGD 96
Query: 64 EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCK 123
++ +V TL A + +++ + EL + PL L ELE+++ FCI+
Sbjct: 97 DLLSVATTLAAARRLRRQI-DYPELRPVTTALVEPL-------RTLPELEQRLRFCIEDG 148
Query: 124 LLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+ DRAS L +R + R + L+ L+++ AA + ++ +R R
Sbjct: 149 GRVA-DRASPPLSGLRRQLASVRMERRDRLNELIRRYAALL------QDTVVAERNGRPV 201
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +KA LP G+ + S+SG+T F+EP+ + N +L E E A+L L+A
Sbjct: 202 LAVKAGAGSQLP-GLVHDSSASGSTVFIEPQAVIPLGNRIRQLEGEEREAERAVLQELSA 260
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
+ + + +++L ++++DLA ARA ++ W+ V P L + + + +EG++HPL
Sbjct: 261 LVGEEQPALEHLQQVLIQLDLALARARYSAWLGAVRPELEADPL----APLQLEGLRHPL 316
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
LL R TV VP+ I+VE RVV ITGP
Sbjct: 317 LLWQERR-----------------QGGRTV-----------VPVTIRVESSLRVVAITGP 348
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++K++GLA LM++AGL++P K P +PW +LADIGD QSL+QNLSTFSGH+
Sbjct: 349 NTGGKTVTLKSVGLAVLMARAGLFVPCKGSPHVPWCQQVLADIGDEQSLQQNLSTFSGHV 408
Query: 420 SRIVDILELV----------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
RI ILE + + LVL+DE+G+GTDP+EG ALA ++L+ L DR L +
Sbjct: 409 RRIARILEALPAAGSDLATQAGAQLVLLDEVGAGTDPTEGTALAIALLKQLADRARLTIA 468
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTH+ +L LK D RFENA+ F +E+L PTY + WG G SNAL IA +G D ++
Sbjct: 469 TTHFGELKALKYDDPRFENASVAFDVESLSPTYHLQWGIPGRSNALAIATRLGLDGAVLD 528
Query: 530 RAQKLV 535
AQ L+
Sbjct: 529 AAQALL 534
>gi|119483388|ref|ZP_01618802.1| MutS 2 protein [Lyngbya sp. PCC 8106]
gi|119458155|gb|EAW39277.1| MutS 2 protein [Lyngbya sp. PCC 8106]
Length = 879
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 208/668 (31%), Positives = 324/668 (48%), Gaps = 131/668 (19%)
Query: 4 AVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
AVV + +P ++ E+ +LL QT A L + + L L I+DI L +LS
Sbjct: 29 AVVTR-NLPIPQTPSETLELLAQTKEAYQLELQLTSGLSLQGIQDIGDALERVERHGILS 87
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI 120
E+ + TL + +++ D+ + P+L EL+ ELE++I CI
Sbjct: 88 GEELLNIATTLAGARQLRRQV--------DAHEEEVPVLAELVSELRTYPELEQEIHRCI 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
D + + DRA+ L IR + K + + +L+ + + +AG I + LIT+R R +
Sbjct: 140 DDRGDVT-DRANPKLTDIRIKLKSTRDRIYQILQSILQR--KAGAIQEQLITQRGDRFVI 196
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA KY +P GI + S+ G T ++EPK +E NN +L E EE A+ +L+ +
Sbjct: 197 PVKAPQKYQVP-GIVHDTSAKGGTLYIEPKSTIELNNQLRQLQRREQLEEEAVRQVLSEQ 255
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG---------------VCPILSSQSHVS 285
IA+ + +++ L+ V IDLA +RA + W++ C + S
Sbjct: 256 IAEVQPDLERLLVIVTTIDLAVSRARYGLWLEANPPTFTNLKIQAEKVECVLPSDTDQTR 315
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
F + + + ++HPLL+ + P+ VPID+
Sbjct: 316 FQNPVTLRQLRHPLLV------WQQQNEQGTPV----------------------VPIDV 347
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ RVV ITGPNTGGKT ++KT+G+A+LM+K GL++PA+ LPWFDL+LADIGD
Sbjct: 348 TIKPSIRVVAITGPNTGGKTVTLKTIGMAALMAKVGLFIPAREPVELPWFDLVLADIGDE 407
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS-------GTDPSE---------- 448
QS+EQ+LSTFSGHI RI IL + ++ ++++ GTD SE
Sbjct: 408 QSIEQSLSTFSGHIRRISRILNAIPSANIGTVNQLSIPVTHQQLGTDDSEVEPVQNQQEE 467
Query: 449 ------------------------------------------GVALATSILQYLRDRVGL 466
G ALAT++LQYL + +
Sbjct: 468 VEIIEEVDSLETLKAKIKDPEDQISNSLILLDEIGAGTDPTEGSALATALLQYLANSAVV 527
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
+ TTH+ +L LK +D RFEN++ EF +TL+PTYR+LWG G SNAL IA+ +G +
Sbjct: 528 TIATTHFGELKALKYQDDRFENSSVEFDEKTLQPTYRLLWGIPGRSNALKIAQRLGLKSE 587
Query: 527 IIQRA-----------QKLVERLRPER-QQHRKSELYQSLMEERRKLESQ-ARTAASLHA 573
I++ A ++ L +R QQ K+E L++E +L + R A L
Sbjct: 588 ILETAASYLGGTSQDVNDVIAGLEAQRKQQETKAEEASKLLKETERLHQELIRKTALLKE 647
Query: 574 EIMDLYRE 581
+L RE
Sbjct: 648 REQELKRE 655
>gi|87125334|ref|ZP_01081180.1| MutS 2 protein [Synechococcus sp. RS9917]
gi|86167103|gb|EAQ68364.1| MutS 2 protein [Synechococcus sp. RS9917]
Length = 798
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 283/533 (53%), Gaps = 57/533 (10%)
Query: 12 PFGKSLEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P L ES++ L ++ A L + L + D+ +L G + AV
Sbjct: 44 PLPSDLRESRERLARSIELAGLDGVVDGGLSFQGVHDLEPVLLRCCKGGTADGEALLAVA 103
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + +++ D + LLK+ L +LE+++ F ++ + + D
Sbjct: 104 DTLAAARRLRRQI--------DDPELRPRCTALLKDVATLPDLEQRLKFSLE-EGGRVAD 154
Query: 130 RASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
RAS L +R + R++ + L ++++ A+Q+ +I +R R + +KA
Sbjct: 155 RASAVLAGLRGQWQTVRQQRRDRLQEVIRRWASQL------QDTVIAERHGRPVLAVKAG 208
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
P G+ + S+SG+T F+EP+ V+ N L EE +L+ L+A +A
Sbjct: 209 AVAQCP-GMVHDSSASGSTVFVEPRQVVDLGNRLADLEGRIREEEQRVLAELSAAVAAEG 267
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ L +L +DL+ RA + QW+ V P L + ++ + + ++HPLL+
Sbjct: 268 EALTRLGAVLLVLDLSLTRARYGQWLGAVPPQLEADP----EAPLVLHDLRHPLLVWQER 323
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
R+ A VPI ++V RVV ITGPNTGGKT
Sbjct: 324 RAGGGAV----------------------------VPISVEVSSHLRVVAITGPNTGGKT 355
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++K++GLA+LM++AGL+LP P LPW +LADIGD QSL+Q+LSTFSGH+ RI I
Sbjct: 356 VTLKSIGLAALMARAGLWLPCSGRPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRI 415
Query: 426 LELV---SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
LE + + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK
Sbjct: 416 LEALHSGAAPALVLLDEVGAGTDPSEGTALATALLRSLADRARLTIATTHFGELKALKYS 475
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
D RFENA+ F +TL PTYR+LWG G SNAL IA +G D +I +AQ+L+
Sbjct: 476 DPRFENASVAFDSDTLSPTYRLLWGIPGRSNALAIATRLGLDADVIAQAQELL 528
>gi|33863813|ref|NP_895373.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9313]
gi|33635396|emb|CAE21721.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9313]
Length = 828
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 274/504 (54%), Gaps = 55/504 (10%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ IL G + S E+ AV TL A + +++ + +
Sbjct: 102 LSFQGVHDLGHILARCSKGGVASGEELLAVADTLAAARRLRRQINDP--------ELRPT 153
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
+ LL + + ELE ++ F ++ + + DR S L +R + R+ + L +++
Sbjct: 154 ISSLLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVVR 212
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ AA + +I R R + +KA+ LP G+ + S+SG+T F+EP+ +
Sbjct: 213 RHAAML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVIT 265
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+N L ++ +L+ L+A +A++ I L + +L++DLA AR + QW+ GV
Sbjct: 266 LSNRLAELDGRIREQQQLVLAELSAAVAEAGVSIGRLAEVLLQLDLALARGRYGQWLGGV 325
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +++ F +++ ++HPLL+ R A
Sbjct: 326 PPTLHAEAAAPF----SLQELRHPLLVWQHRRDHGEAV---------------------- 359
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VPI ++V +VV ITGPNTGGKT ++K++GLA LM++AGL LP P +PW
Sbjct: 360 ------VPISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPW 413
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+QNLSTFSGH+ RI ILE ++ +LVL+DE+G+GTDPSEG A
Sbjct: 414 CAQVLADIGDEQSLQQNLSTFSGHVKRIGCILEALNEGPGPALVLLDEVGAGTDPSEGTA 473
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LAT++L+ L DR L + TTH+ L LK D+RFENA+ F ET+ PTYR+ WG G
Sbjct: 474 LATALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDGETMLPTYRLQWGIPGR 533
Query: 512 SNALNIAKSIGFDRKIIQRAQKLV 535
SNAL+IA +G D +I AQ+L+
Sbjct: 534 SNALSIAMRLGLDGAVIAHAQELL 557
>gi|33866463|ref|NP_898022.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
WH 8102]
gi|33633241|emb|CAE08446.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 8102]
Length = 812
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 194/551 (35%), Positives = 289/551 (52%), Gaps = 73/551 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + +P ++LE S++ L +T A L + L ++D+ +L G
Sbjct: 46 MGRDAARNLVLP--ETLEASRQRLAETVEMAVLDDLTEGGLSFRGVQDLTPVLLRCSKGG 103
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCN-------FLTE 111
+ + E+ AV TL A + +++ E EL C+ L E
Sbjct: 104 VATGEELLAVAETLAAARRLRRQIDEP---------------ELRPACSALIDTMVTLPE 148
Query: 112 LEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGID 167
LE+++ F I+ + I DRAS L +R + R+ + L LL+++A F +
Sbjct: 149 LEQRLKFSIE-EGGRIADRASAPLAWLRQQWHGLRQERRDKLQDLLRRLAP--F----LQ 201
Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+I +R R + +KA +P G + S+SG+T F+EP+ + N L
Sbjct: 202 DSVIAQRHGRPVLAVKAGAVAQVP-GQVHDSSASGSTVFVEPRSVLTIGNRLTDLEGRIR 260
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
EE +L L+A +A + L+ +L++DLA AR + +++ G P + + + F
Sbjct: 261 DEERKVLIELSAVVADDHPVLLQLVSILLQLDLALARGRYGRFLGGTAPRMEASAAAPF- 319
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
E ++HPLL+ R+ A VPI ++V
Sbjct: 320 ---RFETLRHPLLVWQHKRAGGPAV----------------------------VPISMEV 348
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
+ RVV ITGPNTGGKT ++K++GLASLM++AGL LP P LPW +LADIGD QS
Sbjct: 349 SVDLRVVAITGPNTGGKTVTLKSIGLASLMARAGLLLPCAGMPTLPWCAQVLADIGDEQS 408
Query: 408 LEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
L+Q+LSTFSGHI RI ILE + +LVL+DE+G+GTDPSEG ALATS+L+ L DR
Sbjct: 409 LQQSLSTFSGHIKRIGRILEALQSGPSPALVLLDEVGAGTDPSEGTALATSLLKALADRA 468
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L + TTH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D
Sbjct: 469 RLTIATTHFGELKALKYNDARFENASVAFNAETLSPTYELLWGIPGRSNALAIASRLGLD 528
Query: 525 RKIIQRAQKLV 535
++++ A +L+
Sbjct: 529 DQVLEEASQLL 539
>gi|260434383|ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109]
gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
Length = 799
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 294/534 (55%), Gaps = 59/534 (11%)
Query: 12 PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P SLEES++ L +T A L + L ++++ ++ G + S E+ AV
Sbjct: 42 PLPASLEESKQRLAETVEMAVLDDLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVA 101
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL A + ++ T+ EL P+ L++ L ELE+++ F ++ + +
Sbjct: 102 ETLAAARRL-RRQTDDPEL--------RPVCTALIETMVTLPELEQRLKFALE-EGGRVA 151
Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
DRAS L +R + R+ + L LL+++A + + +I +R R + +KA
Sbjct: 152 DRASSALSALRHQWNGLRQERRDKLQELLRRLAPSLQDS------VIAERHGRPVLAVKA 205
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+P G + S+SG+T F+EP+ + N V L + EE +L+ L+A +A+
Sbjct: 206 GAVSQVP-GQVHDSSASGSTLFVEPRSVLTMGNKLVELESRIRDEERKVLAELSALVAEE 264
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ ++ + +DLA AR + +W+ GV P L + S F G++HPLL+
Sbjct: 265 ASVLNQVVAVLRALDLALARGRYGRWLGGVEPQLEAASEAPF----RFSGLRHPLLVWQH 320
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
R+ + P+ VPI ++V E RVV ITGPNTGGK
Sbjct: 321 KRA------DGPPV----------------------VPISLEVSPELRVVAITGPNTGGK 352
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++K++GLA+LM++AG+ LP P LPW +LADIGD QSL+Q+LSTFSGH+ RI
Sbjct: 353 TVTLKSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGR 412
Query: 425 ILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE + R +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK
Sbjct: 413 ILEALHRGGSPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATTHFGELKALKY 472
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++ +AQ+L+
Sbjct: 473 DDARFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQLL 526
>gi|452823864|gb|EME30871.1| DNA mismatch repair protein MutS2 [Galdieria sulphuraria]
Length = 902
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/576 (33%), Positives = 308/576 (53%), Gaps = 64/576 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQS--QPLDLSTIEDI-AGILNSAVSGQLLSPSEICAVRRTL 72
S E++Q+ L +T+ + M+S P D ++ I++ A G LL+P E+ + T
Sbjct: 142 SKEQTQQYLMETNECIRFMESGYSPTDWMVGANLLENIVDRAQKGSLLTPRELYQIVSTT 201
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A++N WK+ ++ + Y L +++N + +LE+ I +D K I D AS
Sbjct: 202 LAISN-WKQSLQSQSTN------YPLLYRIVENVVSMKDLEDSICRSVDEKEQI-RDNAS 253
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L R + + ++ +L + Q + +P+ T+R R + +KA+ + +P
Sbjct: 254 IRLYETRTQIRSTFVHIRKVLHSLLQQ--HEESLQEPIYTERFGRYVIPVKATRRNRVP- 310
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI ++SSSG+T ++EP N +L + E IL L+ ++ ++ + Y+
Sbjct: 311 GIIQDISSSGSTLYIEPNSIRSLTNRMQQLRHIEEEAIEEILFDLSRKVCENADHLLYIS 370
Query: 253 DRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSIN---IEGIKHPLLLGSSLRSL 308
+ ++D ARA F+Q ++G P I+ S S+ + ++ + G++HPLL +S+
Sbjct: 371 HAIFQLDWILARAQFSQQINGRFPTIVESFSNAALSCKVDAWKLRGVRHPLLERNSI--- 427
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPID +V V ITGPNTGGKT ++
Sbjct: 428 --------------------------------VPIDFEVRPGVTAVCITGPNTGGKTVAL 455
Query: 369 KTLGLASLMSKAGLYLPA-KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
KT G+ LM+K GL++P +N +P+F+ I AD+GDHQS+ Q+LSTFS HI RI I++
Sbjct: 456 KTFGIVILMTKVGLFVPCEQNDVHIPFFEDIFADVGDHQSVTQSLSTFSSHILRIQRIVQ 515
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
L + SLVL+DEIG+GTDP EG ALA S+L YL +RVG + TTH+ +L LK KD RFE
Sbjct: 516 LSHKRSLVLLDEIGTGTDPVEGCALAMSLLLYLVERVGFLMATTHHGELKTLKYKDARFE 575
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER------LRPE 541
NA+ E +LRPTYR++WG G S+A+ IA+ +G D I Q A+ +VE L E
Sbjct: 576 NASVELDTFSLRPTYRLIWGVAGRSSAIAIAQRLGLDNWITQSARSIVENGVDKLSLAIE 635
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
+ K Q ++E + ++E + R L ++M+
Sbjct: 636 DIERTK----QQVIEMKEQIERKERELECLERQLME 667
>gi|352095971|ref|ZP_08956918.1| MutS2 protein [Synechococcus sp. WH 8016]
gi|351677327|gb|EHA60476.1| MutS2 protein [Synechococcus sp. WH 8016]
Length = 805
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 277/505 (54%), Gaps = 55/505 (10%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ +L G S E+ +V TL A + +++ D D S
Sbjct: 79 LSFQGVSDLEMVLLRCCKGGTASGEELLSVAHTLAAARRLRRQID-----DPDLRPDCSA 133
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
LLE N L ELE+++ F ++ + + +RASE LE +R + R+ + L ++L+
Sbjct: 134 LLE---NVATLPELEQRLKFALE-EGGRVANRASESLEELRLQWQVARQERRDRLQAVLR 189
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + A +I +R R + +KA P G+ + SSSG T F+EPK +
Sbjct: 190 RWTSLLQDA------VIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIG 242
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N L EE +L+ L+A +A+ I LM +L++DLA AR + QW+ V
Sbjct: 243 LGNRLAALDGRIREEERRVLAELSAAVAEQNDAIARLMAVLLKLDLALARGRYGQWLGAV 302
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +Q D+ I ++HPLL+ + A +
Sbjct: 303 PPRLDAQP----DAPFQILELRHPLLVWQQRKEGGAPVVPVS------------------ 340
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
++V + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P K P LPW
Sbjct: 341 ----------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCKGSPSLPW 390
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS---RESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+Q+LSTFSGH+ RI IL+ ++ +LVL+DE+G+GTDPSEG A
Sbjct: 391 CAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPSPALVLLDEVGAGTDPSEGTA 450
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LA ++L+ L + L + TTH+ +L LK D+RFENA+ F +TL PTY++LWG G
Sbjct: 451 LAIALLRNLANCARLTIATTHFGELKALKYSDSRFENASVAFDSDTLSPTYQLLWGIPGR 510
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVE 536
SNAL IA +GFD +I++A++L++
Sbjct: 511 SNALAIATRLGFDSDVIEQARQLLK 535
>gi|78212059|ref|YP_380838.1| MutS2 family protein [Synechococcus sp. CC9605]
gi|78196518|gb|ABB34283.1| MutS2 family protein [Synechococcus sp. CC9605]
Length = 799
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 290/533 (54%), Gaps = 57/533 (10%)
Query: 12 PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P SL+ES++ L +T A L + L ++++ ++ G + S E+ AV
Sbjct: 42 PLPASLDESKQRLAETVEMAVLNDLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVA 101
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + +++ D + L++ L ELE+++ F ++ + + D
Sbjct: 102 ETLAAARRLRRQI--------DDPELRPVCTALIETMVTLPELEQRLKFALE-EGGRVAD 152
Query: 130 RASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
RAS L +R + R+ + L LL+++A + + +I +R R + +KA
Sbjct: 153 RASSALSALRHQWNGLRQERRDKLQELLRRLAPSLQDS------VIAERHGRPVLAVKAG 206
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+P G + S+SG+T F+EP+ + N L + EE +L+ L+A +A+
Sbjct: 207 AVSQVP-GQVHDSSASGSTIFVEPRSVLTMGNKLAELESRIRDEERKVLAELSALVAEEA 265
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ ++ + +DLA AR + +W+ GV P L + F S G++HPLL+
Sbjct: 266 SALNQVVAVLRTLDLALARGRYGRWLGGVEPQLEPAAEAPFRFS----GLRHPLLVWQHK 321
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
R+ + P+ VPI ++V E RVV ITGPNTGGKT
Sbjct: 322 RA------DGPPV----------------------VPISVEVSPELRVVAITGPNTGGKT 353
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++K++GLA+LM++AG+ LP P LPW +LADIGD QSL+Q+LSTFSGH+ RI I
Sbjct: 354 VTLKSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRI 413
Query: 426 LELVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
LE + R S LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK
Sbjct: 414 LEALQRGSAPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATTHFGELKALKYD 473
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++ +AQ+L+
Sbjct: 474 DARFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQLL 526
>gi|72383421|ref|YP_292776.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
gi|72003271|gb|AAZ59073.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
Length = 804
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 320/583 (54%), Gaps = 68/583 (11%)
Query: 15 KSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
++L SQ+LL+QT +L ++ + + D+ IL G + ++ V TL
Sbjct: 52 RNLSLSQELLSQTLEIGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTL 111
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
RA + K + + Q P L ELLK+ L +L++ + F +D + I DRA
Sbjct: 112 RAARKLRKLIFD---------QVIRPRLSELLKDVATLPDLQKLLEFGLD-EGGRIADRA 161
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L +R R RN L K + I + G + +I++R R + KA
Sbjct: 162 SPKLSELR--RYRNSVRLQR--KDILQDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQ 217
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA-EETAILSLLTAEIAKSEREI 248
+ G+ + S+SG T ++EP+ + N ++ +SEI+ EE +L+ + E+ + I
Sbjct: 218 IK-GMVHDSSASGNTIYVEPQVVISIGNRLAKI-DSEISDEERRLLADWSKEVGLNAIVI 275
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L++ +L+I+ A +RA +++W++GV IL + H F+ I+ +HPLL+
Sbjct: 276 AHLVEILLQIEFALSRARYSKWLNGVPAILDQEEHSPFE----IKDFRHPLLVW------ 325
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+D + TV VP V + +VV ITGPNTGGKT ++
Sbjct: 326 -----------NDFYEKKNTV-----------VPTSFDVAPDLKVVAITGPNTGGKTVAL 363
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDI 425
K++GLA LM+KAGL LP PRLPW + ADIGD QSL+QNLSTFSGH ISRI+D
Sbjct: 364 KSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHILRISRILDA 423
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+++ +LVL+DE+G+GTDP+EG ALA ++LQ + +R L + TTH+ L LK D+R
Sbjct: 424 IDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRARLTIATTHFGQLKALKYSDSR 483
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ F ET++PT+ + WG G SNA+ I+K +G D ++I AQK + PER +
Sbjct: 484 FENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN---PERVDN 540
Query: 546 RKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYRE 581
+++ Q L ++R + +S A AA+ LH E+++ +++
Sbjct: 541 -VNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQK 582
>gi|124025008|ref|YP_001014124.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. NATL1A]
gi|123960076|gb|ABM74859.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. NATL1A]
Length = 804
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 320/583 (54%), Gaps = 68/583 (11%)
Query: 15 KSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
++L SQ+LL+QT +L ++ + + D+ IL G + ++ V TL
Sbjct: 52 RNLSLSQELLSQTLEIGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTL 111
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
RA + K + + Q P L ELLK+ L +L++ + F +D + I DRA
Sbjct: 112 RAARKLRKLIFD---------QVIRPRLSELLKDVATLPDLQKLLEFGLD-EGGRIADRA 161
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L +R R RN L K + I + G + +I++R R + KA
Sbjct: 162 SPKLSELR--RYRNSVRLQR--KDILQDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQ 217
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA-EETAILSLLTAEIAKSEREI 248
+ G+ + S+SG T ++EP+ + N ++ +SEI+ EE +L+ + E+ + I
Sbjct: 218 IK-GMVHDSSASGNTIYVEPQVVISIGNRLAKI-DSEISDEERRLLADWSKEVGLNAIVI 275
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L++ +L+I+ A +RA +++W++GV IL + H F+ I+ +HPLL+ +
Sbjct: 276 AHLVEILLQIEFALSRARYSKWLNGVPAILDQEEHSLFE----IKDFRHPLLVWN----- 326
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
D + TV VP V + +VV ITGPNTGGKT ++
Sbjct: 327 ------------DFHEKKNTV-----------VPTSFDVAPDLKVVAITGPNTGGKTVAL 363
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI---SRIVDI 425
K++GLA LM+KAGL LP PRLPW + ADIGD QSL+QNLSTFSGHI SRI+D
Sbjct: 364 KSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHILRISRILDA 423
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+++ +LVL+DE+G+GTDP+EG ALA ++LQ + +R L + TTH+ L LK D+R
Sbjct: 424 IDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRARLTIATTHFGQLKALKYSDSR 483
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ F ET++PT+ + WG G SNA+ I+K +G D ++I AQK + PER +
Sbjct: 484 FENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN---PERVDN 540
Query: 546 RKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYRE 581
+++ Q L ++R + +S A AA+ LH E+++ +++
Sbjct: 541 -VNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQK 582
>gi|116073767|ref|ZP_01471029.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
gi|116069072|gb|EAU74824.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
Length = 804
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 289/532 (54%), Gaps = 65/532 (12%)
Query: 17 LEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE S++ L ++ A L + L + D+ +L G + E+ V TL A
Sbjct: 54 LEASRQWLARSIELAGLDGVTEGGLSFQGVHDLDAVLKRCSKGGVADGEELLEVADTLAA 113
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ +++ +D D PL EL ELE+++ F ++ + + DRAS
Sbjct: 114 ARRLRRQI-----VDPD----LRPLCTELFNAVATFPELEQRLKFSLE-EGGRVADRASA 163
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L +R + R++ + L ++++ +AQ+ +I +R R + +KA
Sbjct: 164 ALAGLRLQWQSLRQQRRDRLQDVMRRWSAQL------QDTVIAERHGRPVLAVKAGAVGH 217
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE---IAEETAILSLLTAEIAKSER 246
G+ + S+SG T F+EP+ +E N RL+ E EE +L+ L+ + +
Sbjct: 218 C-KGMVHDSSASGNTVFVEPQAVIELGN---RLAAQEGRIREEEQRVLAELSTAVGEQHD 273
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ L + +L +DL ARA + QW+ GV P L + D+ +E ++HPLL+ R
Sbjct: 274 PLTKLGEVLLLLDLTLARARYGQWLGGVPPRLEADP----DAPFALEQLRHPLLVWQQKR 329
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
A DV VPI I V + RVV ITGPNTGGKT
Sbjct: 330 EYGA----------DV------------------VPISITVAGDLRVVAITGPNTGGKTV 361
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++K++GLA+LM++AGL+LP + P LPW L+LADIGD QSL+Q+LSTFSGH+ RI IL
Sbjct: 362 TLKSIGLAALMARAGLWLPCQGTPSLPWCALVLADIGDEQSLQQSLSTFSGHVKRIGRIL 421
Query: 427 ELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+ + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK D
Sbjct: 422 AALDQGATPALVLLDEVGAGTDPSEGTALATALLRSLADRARLTIATTHFGELKALKYSD 481
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+RFENA+ F ETL PTY++LWG G SNAL IA +G D ++I++A+ L+
Sbjct: 482 SRFENASVAFDSETLSPTYQLLWGIPGRSNALAIATRLGLDPQVIEQARGLL 533
>gi|113953514|ref|YP_731592.1| MutS2 family protein [Synechococcus sp. CC9311]
gi|113880865|gb|ABI45823.1| MutS2 family protein [Synechococcus sp. CC9311]
Length = 805
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 178/505 (35%), Positives = 278/505 (55%), Gaps = 55/505 (10%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ +L G S E+ +V TL A + +++ D D R S
Sbjct: 79 LSFQGVYDLEMVLLRCYKGGTASGEELLSVAHTLAAARRLRRQID-----DPDLRPRCSA 133
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
LLE N L ELE+++ F ++ + + +RASE LE +R + R+ + L ++++
Sbjct: 134 LLE---NVATLPELEQRLKFALE-EGGRVANRASESLEDLRLQWQVARQERRDRLQAVVR 189
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + +I +R R + +KA P G+ + SSSG T F+EPK +
Sbjct: 190 RWSTLL------QDTVIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIG 242
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N L EE +L+ L+A +A+ I LM +L++DLA AR + QW+ V
Sbjct: 243 LGNRLAALDGRIRDEERRVLAELSAAVAEQNDVIDRLMAVLLKLDLALARGRYGQWLGAV 302
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +++ DS +I ++HPLL+ + A +
Sbjct: 303 PPRLEAEA----DSPFHILELRHPLLVWQQRKEGGAPVVPVS------------------ 340
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
++V + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P P LPW
Sbjct: 341 ----------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCNGSPSLPW 390
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+Q+LSTFSGH+ RI IL+ ++ +LVL+DE+G+GTDPSEG A
Sbjct: 391 CAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPAPALVLLDEVGAGTDPSEGTA 450
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LA ++L+ L + L + TTH+ +L LK D+RFENA+ F ++L PTY++LWG G
Sbjct: 451 LAIALLRNLANCARLTIATTHFGELKALKYSDSRFENASVSFDSDSLSPTYQLLWGIPGR 510
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVE 536
SNAL IA +GFD +I++A++L++
Sbjct: 511 SNALAIATRLGFDSGVIEQARQLLK 535
>gi|220931412|ref|YP_002508320.1| MutS2 family protein [Halothermothrix orenii H 168]
gi|254766598|sp|B8D298.1|MUTS2_HALOH RecName: Full=MutS2 protein
gi|219992722|gb|ACL69325.1| MutS2 family protein [Halothermothrix orenii H 168]
Length = 791
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 204/593 (34%), Positives = 296/593 (49%), Gaps = 78/593 (13%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQR-YSPLLEL 102
I D+ I+ A G +LS E+ VR TL V + K E D LQ YS + E
Sbjct: 68 IRDLREIIEKADKGIVLSVKEVMDVRSTLEGVRELKKYSREIGTGIDDELQDIYSIITEK 127
Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
L +LE +I CID + I D AS L IR E R ++ L +
Sbjct: 128 FDRLTPLKQLENEINRCID-EHGEIKDSASRKLRSIRREMDRIEGKINDKLNSIINNTRY 186
Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
+ L+T R +R V +K+S+K GI + S+SG TYFMEP V+ NN L
Sbjct: 187 QEMLQDKLVTIRGNRYVVPVKSSYKNTFS-GIVHDQSTSGLTYFMEPMAIVKLNNRLGEL 245
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
+E E IL L+ I + R++ ++ V +D+ FARA F+ ++G+ P ++ +
Sbjct: 246 KRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARFSIEIEGIEPGINDKG 305
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
INI G +HPLL +K PVP
Sbjct: 306 F------INIRGGRHPLL----------------KVK--------------------PVP 323
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
IDI V E + +VITGPNTGGKT ++KT+GL LM +AGL++PA+ + F+ + ADI
Sbjct: 324 IDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVYADI 383
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQNLSTFS HI+RI L SLVL+DEIG GTDP EG AL +IL++LR+
Sbjct: 384 GDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEHLRE 443
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
R + TTHY+++ ENA+ EF +ETL+PTYR+L G G SNA IA +G
Sbjct: 444 RGVTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIALKLG 503
Query: 523 FDRKIIQ-----------RAQKLVERLRPERQQH---------------RKSELYQSLM- 555
II+ + + ++ L ER+++ +K + Y SL+
Sbjct: 504 LPHDIIKDGKELMSGDDIKVENIISDLNEERKKYEQLKIEIEERLEAVKKKEQKYDSLLT 563
Query: 556 ---EERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSKVD 605
+ ++KL ++AR A +I+ R++S + +FA S + +V+
Sbjct: 564 DLEKRKKKLITEAREEA---LQIIKKTRKESKEILRRLKNKEFASRSDIDRVE 613
>gi|88807280|ref|ZP_01122792.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
gi|88788494|gb|EAR19649.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
Length = 794
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 278/530 (52%), Gaps = 59/530 (11%)
Query: 16 SLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
SL++S L QT +L + L + D+A L G S E+ V TL
Sbjct: 41 SLQDSLALQAQTLEMGSLDGVLEGGLSFQGVSDLARTLLRCSKGGTASGEELLDVANTLA 100
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + +++ E P+ LL++ +LE+++ F I+ + + DRAS
Sbjct: 101 AARRLRRQIDEP---------ELRPVCTTLLRDVATFPDLEQRLKFAIE-EGGRVADRAS 150
Query: 133 EDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L+ +R + R R + L ++++ AA + +I +R R + +KA
Sbjct: 151 PGLDGLRRQWQELRARRRDRLQDVIRRWAAHL------QDTVIAERHGRPVLAVKAGAGG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
P G+ + S+SG+T F+EPK ++ N + EE +LS L+A +A+ +
Sbjct: 205 QCP-GMVHDSSASGSTMFVEPKSVIDLGNKLADVDGRIREEEQRVLSELSAAVAEQVEGL 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++LM +L++DLA AR + QW+ V P L S + D+ + ++HPLL+
Sbjct: 264 QHLMQVLLKLDLALARGRYGQWLGAVPPRLES----AVDAPFELRTLRHPLLVWQE---- 315
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ P V + RVV ITGPNTGGKT ++
Sbjct: 316 ---RNEQGPTVVPVSVEVSSS---------------------LRVVAITGPNTGGKTVTL 351
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
K++GLA+LM++AGL++P P LPW +LADIGD QSL+Q+LSTFSGH+ RI ILE
Sbjct: 352 KSIGLAALMARAGLWVPCSGSPTLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRILEA 411
Query: 429 VSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ +LVL+DE+G+GTDPSEG ALAT++L+ L DR L V TTH+ +L LK D R
Sbjct: 412 IRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADRARLTVATTHFGELKALKYSDAR 471
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
FENA+ F ETL PTY +LWG G SNAL IA +G + +I A+ L+
Sbjct: 472 FENASVAFDSETLSPTYHLLWGIPGRSNALAIATRLGLEGSVIDEARALL 521
>gi|163814590|ref|ZP_02205979.1| hypothetical protein COPEUT_00741 [Coprococcus eutactus ATCC 27759]
gi|158450225|gb|EDP27220.1| MutS2 family protein [Coprococcus eutactus ATCC 27759]
Length = 821
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 225/404 (55%), Gaps = 42/404 (10%)
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L+ +R ++ E L + L K+ + + L+T R R C+ +KA +K
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
P G+ + SS+GAT F+EP V NN L N E+AE IL L+A+ A I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
KY D + E+D FARA FA+ G PI ++ D ++I +HPLL
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIRQGRHPLL-------- 342
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ TV VP+DIK+ + ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL SLM ++GL++PA + RL FD + ADIGD QS+EQNLSTFS H+S IV IL+
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ SLVL DE+G GTDP EG ALA +IL +L D + TTHY++L EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNDMGVRCMATTHYSELKTFAMSTPGVEN 495
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
A+ EF + TL+PTY+++ G G SNA IAK +G D II+ A+
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDESIIESAK 539
>gi|296133368|ref|YP_003640615.1| MutS2 family protein [Thermincola potens JR]
gi|296031946|gb|ADG82714.1| MutS2 family protein [Thermincola potens JR]
Length = 782
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 286/558 (51%), Gaps = 59/558 (10%)
Query: 26 QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T+ A + + +P + L + D GI+ A G +L P+E+ V L A + + +
Sbjct: 45 ETAEAAEIYRKEPDVPLGGMRDTRGIIRKANIGGILEPAELLDVAGNLVAARRLKRFFS- 103
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
D +Y + +L+KN ELEEKI ID + D AS +L IR +
Sbjct: 104 ------DRSHQYPIMGDLVKNLFINKELEEKISQAIDPSGAVA-DEASPELRRIRHRIRE 156
Query: 145 NMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
N+ S ++ + +Q +Q +P+IT R R V +K ++ P GI + S+SGA
Sbjct: 157 TEINIKSKMEGIIRSQEYQKF-FQEPIITVRGDRYVVPVKQEYRGQFP-GIIHDQSASGA 214
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T F+EP AVE NN +L + E E IL+ L+A + E+ + ID A
Sbjct: 215 TLFIEPVAAVELNNELRKLYSDEEREVLRILTQLSASVKAFSEELLSDAKILGTIDFILA 274
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+ A M+ PI + D IN+ +HPL+ G
Sbjct: 275 KGKLAHRMNASKPIFNK------DGYINLRKCRHPLIKGHV------------------- 309
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VPIDI + + V+VITGPNTGGKT S+KT+GL + M++AGL+
Sbjct: 310 -----------------VPIDIYLGRDFHVLVITGPNTGGKTVSLKTVGLTAAMAQAGLH 352
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+P + ++P F I DIGD QS+EQ+LSTFSGH+ I+ IL V+ +LVL+DE+G+G
Sbjct: 353 IPCEPGSQVPVFHDIFVDIGDEQSIEQSLSTFSGHLKNIIHILAKVNESALVLLDELGAG 412
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP EG ALA +IL+YL + V TTHY++L + ENA+ EF +TLRPTY+
Sbjct: 413 TDPVEGAALAMAILEYLYQKKARTVATTHYSELKVFAFERQGVENASVEFDSKTLRPTYK 472
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
+L G G S+A IA +G ++ RA+ + ++ + ++L + L RRK E
Sbjct: 473 LLIGQPGRSSAFEIALRLGLPEALVTRARSFL-----TSEEIQVADLVEELETNRRKAEE 527
Query: 564 QARTAASLHAEIMDLYRE 581
+ R A L E+ ++ R+
Sbjct: 528 ERRKAERLRRELDEMRRD 545
>gi|392960889|ref|ZP_10326353.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|421054879|ref|ZP_15517843.1| MutS2 family protein [Pelosinus fermentans B4]
gi|421058104|ref|ZP_15520836.1| MutS2 protein [Pelosinus fermentans B3]
gi|421063592|ref|ZP_15525555.1| MutS2 protein [Pelosinus fermentans A12]
gi|421071758|ref|ZP_15532871.1| MutS2 protein [Pelosinus fermentans A11]
gi|392439982|gb|EIW17670.1| MutS2 family protein [Pelosinus fermentans B4]
gi|392446346|gb|EIW23631.1| MutS2 protein [Pelosinus fermentans A11]
gi|392454456|gb|EIW31288.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|392461473|gb|EIW37661.1| MutS2 protein [Pelosinus fermentans B3]
gi|392462624|gb|EIW38682.1| MutS2 protein [Pelosinus fermentans A12]
Length = 787
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 284/555 (51%), Gaps = 68/555 (12%)
Query: 11 IPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
IP K E +K+ A L M S PL I DI +L A G +L+P E+ AV
Sbjct: 35 IPSSKLAEVKEKIAETEEARGILDAMSSIPL--GGIRDIRTLLKRAEIGSVLAPDELVAV 92
Query: 69 RRTL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKL 124
TL R + N + + A + L Y+ + +L+N NF+ + + G D
Sbjct: 93 ASTLYASRRMKNFFMDMPVALTI----LLGYAEKINVLRNIENFIENIVNEQGQIRDDAS 148
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
+ +L E IR + R + LD +L+ Q + L+T R R + IK
Sbjct: 149 VELLHVRRE----IRLSQSRIKDKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQ 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++ P GI + S+SGAT F+EP V NN +L+++E E IL T +IA
Sbjct: 201 EYRNHFP-GIIHDQSASGATVFVEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANV 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
I D + ID AFA+A + M PI++++ +V N+ +HPL+
Sbjct: 260 SETIYMNCDMLANIDFAFAKAKLSLTMQATMPIINNKGYV------NLRQARHPLIE--- 310
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+D VPIDI + + ++ITGPNTGGK
Sbjct: 311 --------------------------------ADVVVPIDIFIGKDFNTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGL +LM++AGLY+P +N + F+ I ADIGD QS+EQ+LSTFS H++ +V
Sbjct: 339 TVTLKTLGLFALMTQAGLYIPVQNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVR 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL ++ E LVLIDEIG+GTDP EG ALA SIL++L + + TTHY++L
Sbjct: 399 ILNQITSEDLVLIDEIGAGTDPDEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQ 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA+ EF ++TLRPTYR+L G G SNA I+K +G +II +A + +++
Sbjct: 459 GIENASVEFDIQTLRPTYRLLIGVPGSSNAFAISKRLGLSDRIIDQASQFIDK------D 512
Query: 545 HRKSELYQSLMEERR 559
H + E + +EE++
Sbjct: 513 HAEFETVLNALEEQK 527
>gi|159902779|ref|YP_001550123.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9211]
gi|159887955|gb|ABX08169.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9211]
Length = 805
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 294/542 (54%), Gaps = 57/542 (10%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQL 59
G + +IP + +E ++K L++T L + + ++ G++ G +
Sbjct: 42 GKRECKNIEIP--QDIETTRKRLSETLEIGTLDKNLEAGISFQGVNELDGVILHCSKGGI 99
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQR-YSPLLELLKNCNFLTELEEKIGF 118
S E+ ++ TLRAV + KK+ E D + R Y+ L + ELE+ + F
Sbjct: 100 ASGEELLSIAETLRAVRRL-KKIFE------DPVSRPYTT--SLFIDLATHHELEKVLLF 150
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRS 176
I+ + + DRAS L +R R++++L + + + + G + +I +R
Sbjct: 151 GIE-EGGRVADRASNQLSQLR----RHLQDLRIGRRSILQDLIRRNGSILQDTVIAERYG 205
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +K +P G+ + SSSG T F+EP+ + N V + EE +LS+
Sbjct: 206 RPVIAMKVGSVDQVP-GVVHDSSSSGNTIFLEPQIVISLGNQIVEIQTKISKEEERLLSI 264
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
+ +AK+ + +L +L+++L ARA + W+ GV P+++++ D I+
Sbjct: 265 WSQLVAKNINSLNHLSSVLLQLELGLARARYGDWLGGVLPVITTKE----DDPFLIKDFS 320
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL ++ P+ DV SKG+ +VV I
Sbjct: 321 HPLLL---WKNKKLGGHKVIPITFDV----------SKGL---------------KVVAI 352
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++K+ GLA LM++ G+ LP + P LPW + +LADIGD QSLEQNLSTFS
Sbjct: 353 TGPNTGGKTIALKSFGLAVLMARCGMLLPCSSEPTLPWCNQVLADIGDEQSLEQNLSTFS 412
Query: 417 GHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
GHI+RIV IL+++++ ++VL+DE+G+GTDP+EG A+A S+L+ L D L + TTH
Sbjct: 413 GHIARIVRILDVIAQSPGPTVVLLDEVGAGTDPTEGSAIAISLLRALADSARLTIATTHL 472
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK D+RFENA+ F ET+RPTY +LWG G SNA+ IA +G D +I + A+K
Sbjct: 473 GELKALKYSDSRFENASVAFDSETIRPTYHLLWGIPGRSNAVAIAIRLGLDSQITETAKK 532
Query: 534 LV 535
L+
Sbjct: 533 LI 534
>gi|338814182|ref|ZP_08626216.1| MutS2 family protein [Acetonema longum DSM 6540]
gi|337273787|gb|EGO62390.1| MutS2 family protein [Acetonema longum DSM 6540]
Length = 786
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 278/526 (52%), Gaps = 59/526 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+EE Q L++T AL ++ S P + L I DI + A G +L E+ AV L A+
Sbjct: 40 MEEVQFRLSETREALGILCSVPNVPLGGIRDIREGIKRAAIGGILDTGELMAVGGVLYAI 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + +L G L YS + ++N LE+ I I + I D AS +L
Sbjct: 100 RRMKSFFQDIPDL-GPILTDYSGGITPVRN------LEQAIENAISEQGQI-RDDASPEL 151
Query: 136 ELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R E R+R E +DS+L Q + L+T R R C+ +K H++ P
Sbjct: 152 SRLRREIRTTRQRIREKVDSILHSSEYQKY----FQDVLVTVRGDRYCIPVKQEHRHQFP 207
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT F+EP V+ NN + +E E IL+LL+ ++AKS +
Sbjct: 208 -GIIHDQSASGATVFIEPMAVVQLNNDLKQAMAAEKNEIERILTLLSLQVAKSASLLTQS 266
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ + ID AFA+A A + P+ + V + +HPL+
Sbjct: 267 CETMAHIDFAFAKARLALDLKAHEPLFNQTGQVELRQA------RHPLI----------- 309
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
P S+ VPID+++ + ++VITGPNTGGKT ++KT+
Sbjct: 310 -----P-------------------SEDVVPIDVRIGNDFHILVITGPNTGGKTVALKTV 345
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ +LM++AGL++PA N +L F I ADIGD QS+EQ+LSTFS H++ +V IL V+
Sbjct: 346 GIFALMAQAGLFIPAANECQLTVFHNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQVTG 405
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
+ LVL+DEIG GTDP EG ALA +IL+YL + TTHY++L + ENA
Sbjct: 406 KDLVLLDEIGIGTDPDEGAALAMAILEYLHSIGARTIATTHYSELKTFAYSRSGIENACV 465
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
EF +TLRPTYR+L G G SNA I+K +G KII RA++L+++
Sbjct: 466 EFDQQTLRPTYRLLIGVPGSSNAFQISKRLGLPVKIIDRARQLLDK 511
>gi|302854502|ref|XP_002958758.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
nagariensis]
gi|300255866|gb|EFJ40148.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
nagariensis]
Length = 1442
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 315/651 (48%), Gaps = 105/651 (16%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI-- 65
+ Q+P G+S EES+ LL QT+ AL +++ DI + +A +G L+ ++
Sbjct: 421 RGQLPRGRSREESELLLQQTAEALEAN----IEVRDCFDIRPAVEAAAAGVCLNAKQLES 476
Query: 66 -CAVRRTLRAVNNVWKKLTEAAELDGDSLQ-----------RYSPLLELLKNCNFLTELE 113
C + +L +V + A+ L+ RY L L + E E
Sbjct: 477 LCTI--SLFLYLHVGRMQGVASTLESAFAVKAAATAPPHRYRYPSLAALAEG----IEEE 530
Query: 114 EK-----IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
E+ I CI K + D ASE L +RAER+ N E L ++ A + Q G +
Sbjct: 531 ERTLLRAIRACI--KFGSVCDDASESLAAVRAERQSNKERLRKEVEGWARSMQQRGAAEA 588
Query: 169 PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+ R R CVG+++ + LP G + L+ SSSGAT +MEP+ V+ NNME L E
Sbjct: 589 GAVAIVRGRFCVGVRSGRQGELPRGSVRLSSSSSGATVYMEPQPCVDLNNMEAVLGEREE 648
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
E +L LL+ + ++ L+ V +DL ARA ++WM P +
Sbjct: 649 QEVQKVLGLLSKMLGTRVPQLLSLLGSVTSLDLVAARARHSRWMGATRPEF--EEFGPGA 706
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASS-NSNPLKSDVE----------------------- 323
S +++ G HPLL+ L L A S + N D +
Sbjct: 707 SPLHVPGALHPLLMQRGLPPLPQAPSVDDNRFDRDFQAAPAWELRRVVVPDGPRSGELPE 766
Query: 324 ---NSEMTVG---SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
+ +T G ++S S P P+D++V VV ITG GKT ++K GL LM
Sbjct: 767 YGSTTAVTDGGSATVSGSSSLLPRPLDLRVPPGKAVVAITG----GKTVTLKAAGLMVLM 822
Query: 378 SKAGLYLP--------AKNH----------------PRLPWFDLILADIGDHQSLEQNLS 413
++AGL+LP H PRL WFD +LADIGD QSL+QNLS
Sbjct: 823 AQAGLFLPYTAASGISTATHGSPPCPRATTSGLTPRPRLVWFDRVLADIGDAQSLQQNLS 882
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFSGHI RI IL SLVL+DE+GSGTDP EG ALA ++L L + L + TTH+
Sbjct: 883 TFSGHIRRIRGILATAGPGSLVLLDEVGSGTDPLEGAALARAVLDRLAGQARLTLATTHH 942
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK---IIQR 530
A+L ++D R+ N + F +LRPTYR+ WG+ G SNAL+IA+++GFDR+ I
Sbjct: 943 AELKRAAEEDGRYVNVSMAFDTASLRPTYRLCWGAAGASNALDIAEALGFDRQDSHIAVV 1002
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
A+ LV +L RQ+ +E +R L + A S E + RE
Sbjct: 1003 ARSLVRQLDETRQE----------LEAQRALRQRLEAAQSRLQETVSAVRE 1043
>gi|295094560|emb|CBK83651.1| MutS2 family protein [Coprococcus sp. ART55/1]
Length = 821
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/404 (40%), Positives = 226/404 (55%), Gaps = 42/404 (10%)
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L+ +R ++ E L + L K+ + + L+T R R C+ +KA +K
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
P G+ + SS+GAT F+EP V NN L N E+AE IL L+A+ A I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
KY D + E+D FARA FA+ G PI ++ D ++I+ +HPLL
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIKQGRHPLL-------- 342
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ TV VP+DIK+ + ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL SLM ++GL++PA + RL FD + ADIGD QS+EQNLSTFS H+S IV IL+
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ SLVL DE+G GTDP EG ALA +IL +L + + TTHY++L EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNNMGVRCMATTHYSELKTFAMSTPGVEN 495
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
A+ EF + TL+PTY+++ G G SNA IAK +G D II+ A+
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDDSIIESAK 539
>gi|390566333|ref|ZP_10246744.1| MutS2 protein [Nitrolancetus hollandicus Lb]
gi|390170419|emb|CCF86090.1| MutS2 protein [Nitrolancetus hollandicus Lb]
Length = 796
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 297/565 (52%), Gaps = 56/565 (9%)
Query: 3 HAVVQKAQIPFGKSLEESQ--KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
++V ++ + G S + Q LL+ T A+ ++ + P + + DI +L+ AV G L
Sbjct: 24 YSVARERAVSIGPSGDPDQVAYLLSITREAVDLLNTNPGFSVGGVRDIRPVLDRAVRGAL 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L P+E+ V T++A + + + + +R+ L E ++ L LE +
Sbjct: 84 LLPTELADVLDTIQAAHTLRRGFFRTQ----TATRRHPGLAEFIEAIASLPALEADLART 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+ + I LD AS +L IR + K L L ++ A AG + ++T R R
Sbjct: 140 VGPRGEI-LDTASAELAEIRRDLKSAHARLLDRLNRMIASGEYAGALQDAIVTMREGRYV 198
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +KA H+ +P G+ S+SG T F+EP V+ NN L +E E IL +
Sbjct: 199 IPVKADHRGQVP-GVVHGTSASGVTLFIEPMNVVDLNNRWRELQMAEEHEVERILRARSD 257
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS------INIE 293
+IA + ++ ++ V+ DLA A+A A + P L S H + ++S IN+
Sbjct: 258 QIASAAGDLGRSVEAVVAFDLALAKARLAFDLRAHEPGLVS-GHGNAETSGHARHRINLR 316
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+HPLL +++ VPID+++ RV
Sbjct: 317 QARHPLLDPATV-----------------------------------VPIDVRLGETYRV 341
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
+VITGPNTGGKT ++KT+GL ++M+++GL++PA + L F I AD+GD QS+EQ+LS
Sbjct: 342 LVITGPNTGGKTVALKTVGLLAMMAQSGLFIPAADGSELSVFPAIYADVGDEQSIEQSLS 401
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H+ R++ +L R+SLVL+DE+G+GTDP EG ALA +I++ L +R LA+VTTHY
Sbjct: 402 TFSSHMRRVIAMLRSADRDSLVLLDELGAGTDPQEGSALARAIIEALLERGSLAIVTTHY 461
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
++L ENA+ EF +ETL PTYR+L G G SNAL IA+ +G +I A++
Sbjct: 462 SELKAFAYVTAGTENASVEFDVETLAPTYRLLTGIPGRSNALAIARRLGLPEPVIAEARR 521
Query: 534 LVERLRPERQQHRKSELYQSLMEER 558
L PE + R E+ + +R
Sbjct: 522 Y---LTPESE--RVEEMLSEIQHQR 541
>gi|148240433|ref|YP_001225820.1| mismatch repair ATPase [Synechococcus sp. WH 7803]
gi|147848972|emb|CAK24523.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. WH 7803]
Length = 794
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 279/534 (52%), Gaps = 59/534 (11%)
Query: 12 PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P SL S L QT A+L + L + D+A L G S E+ V
Sbjct: 37 PLPDSLPASLTLQAQTLEMASLDGVLDGGLSFQGVRDLAPTLLRCSKGGTASGEELLEVA 96
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL A + +++ E P+ LL++ +LE+++ F I+ + +
Sbjct: 97 DTLAAARRLRRQIDEP---------ELRPVCTTLLEDVATFPDLEQRLKFAIE-EGGRVA 146
Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
DRAS L+ +R + R + + L ++++ AA + +I +R R + +KA
Sbjct: 147 DRASPGLDGLRRQWQELRAKRRDRLQDVIRRWAAHL------QDTVIAERHGRPVLAVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
P G+ + S+SG+T F+EPK ++ N + EE +L+ L+A +A+
Sbjct: 201 GAGGQCP-GMVHDSSASGSTVFVEPKVVIDLGNKLANVDGRIREEEQRVLAELSAAVAEQ 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+++LM +L++DLA AR + QW+ V P L S + D+ ++ ++HPLL+
Sbjct: 260 VEGLQHLMQVLLKLDLALARGRYGQWLGAVPPRLES----AVDAPFELKTLRHPLLVWQE 315
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+ P V + RVV ITGPNTGGK
Sbjct: 316 -------RNEQGPSVVPVSVEVSSS---------------------LRVVAITGPNTGGK 347
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++K++GLA+LM++AGL++P P LPW +LADIGD QSL+Q+LSTFSGH+ RI
Sbjct: 348 TVTLKSIGLAALMARAGLWVPCTGSPTLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGR 407
Query: 425 ILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L V TTH+ +L LK
Sbjct: 408 ILEAIRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADRARLTVATTHFGELKALKY 467
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
D RFENA+ F +TL PTY +LWG G SNAL IA +G + +I A+ L+
Sbjct: 468 SDARFENASVAFDSDTLSPTYHLLWGIPGRSNALAIATRLGLETSVIDDARALL 521
>gi|333978122|ref|YP_004516067.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821603|gb|AEG14266.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 785
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 283/557 (50%), Gaps = 65/557 (11%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L QT+ A +++ +P D DI L V G +L P E+ +TL A + K
Sbjct: 46 MLAQTTQARELLRLEPGADFGGWHDIRQYLQRVVRGAVLEPQELLETGQTLGACRRIRKF 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AE G RY L E+ TELE+KI I I D AS L IR
Sbjct: 106 F---AERPG----RYPLLEEIALTIGNFTELEKKIARAI-LPGGEIADDASTALSTIRRR 157
Query: 142 RKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+R E L+S+++ A Q + + P++T R R V +K ++ +P GI +
Sbjct: 158 LQRAQQQVKEQLESIVRSPAYQKY----LQDPIVTIREGRYVVPVKQEYRAQVP-GIVHD 212
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT F+EP VE NN RL +E E IL L+ +A E+ ++ + +
Sbjct: 213 QSASGATLFIEPMAVVESNNEVRRLQVAEKQEIARILGELSGAVAARGEELALSLEALGQ 272
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D ARA +++ +D V P L +N+ +HPLL GS
Sbjct: 273 LDFILARARYSEHLDAVEPRLLPAPR------LNLRQARHPLLSGSV------------- 313
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
VPI I V + +VITGPNTGGKT ++KT+GL +LM
Sbjct: 314 -----------------------VPISIHVGYQFDTLVITGPNTGGKTVTLKTVGLLALM 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+++GL++PA L FD + ADIGD QS+EQ+LSTFS H++ IV IL V + SLVL+
Sbjct: 351 AQSGLHIPAGEGSELGVFDEVFADIGDEQSIEQSLSTFSSHLTNIVQILNQVGQGSLVLL 410
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP+EG ALA +IL+ L + V TTHY++L R ENA+ EF T
Sbjct: 411 DELGAGTDPAEGAALAQAILERLHEMGAKTVATTHYSELKNFAYARERVENASVEFDAIT 470
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
L+PTYR+L G G SNA IA+ +G +++RA+ + +Q + ++L Q L
Sbjct: 471 LKPTYRLLIGKPGSSNAFEIARRLGLAPDLVERARSFM-----TAEQVQVADLMQQLERA 525
Query: 558 RRKLESQARTAASLHAE 574
R++ E + A + E
Sbjct: 526 RQQAERELEEARRMRQE 542
>gi|33239697|ref|NP_874639.1| mismatch repair ATPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237222|gb|AAP99291.1| Mismatch repair ATPase (MutS family) [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 805
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 268/494 (54%), Gaps = 57/494 (11%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNF 108
IL + G +LS E+ +V TL+A + +++ D L R P++ LL +
Sbjct: 90 ILLRSSKGGVLSGLELLSVAETLKAARRLRRQIY-------DPLSR--PIISSLLSDLAT 140
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 164
L EL+ I F ++ + + DRASE L +R + R + L L++K +
Sbjct: 141 LPELQRLIEFGLE-EGGRVADRASEKLSELRRQVYILRIERRDLLKDLIRKCNS------ 193
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ +I +R +R + +K+ L I N S+SG T F+EPK + N
Sbjct: 194 FLQDTVIAERYNRPVLALKSGAIDQLLGTIHDN-SASGNTVFLEPKAVIPLGNRIEEFEA 252
Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
+ EE +L+ + E+ + + ++ L +L ++ A ARA ++ W+ GV P + +
Sbjct: 253 KILVEEQRLLAYWSEEVGTNFQVLESLSQILLRLEFALARARYSNWLGGVAPQIRDEE-- 310
Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
D+ I+ +HPLL+ E+ E D +PI
Sbjct: 311 --DAPFIIQEFRHPLLIWQ-------------------EHYEQ---------GDVVIPIS 340
Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
+V + RVV ITGPNTGGKT ++K++GLA LM+K GL+LP P LPW + +LADIGD
Sbjct: 341 FEVSSDLRVVAITGPNTGGKTVTLKSIGLAILMTKLGLFLPCVGEPSLPWCNQVLADIGD 400
Query: 405 HQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
QSL+QNLSTFSGH+ RI+ IL+ + S S++L+DE+G+GTDP+EG ALA ++L+
Sbjct: 401 EQSLQQNLSTFSGHVVRIIRILDAIAIRSGPSIILLDELGAGTDPTEGTALAIALLKTFA 460
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
DR L + TTH+ +L LK D+RFENA+ F ET+RPTY + WG G SNAL IA+ +
Sbjct: 461 DRARLTIATTHFGELKALKYHDSRFENASVGFDSETIRPTYHLQWGIPGKSNALAIARRL 520
Query: 522 GFDRKIIQRAQKLV 535
G D + RAQ L+
Sbjct: 521 GLDHLVANRAQDLI 534
>gi|421078676|ref|ZP_15539628.1| MutS2 protein [Pelosinus fermentans JBW45]
gi|392523253|gb|EIW46427.1| MutS2 protein [Pelosinus fermentans JBW45]
Length = 787
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 276/533 (51%), Gaps = 66/533 (12%)
Query: 31 LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAE 87
L M S PL I DI +L A G +L+P E+ AV TL R + N + +
Sbjct: 57 LDAMSSIPL--GGIRDIRTLLKRAEIGSVLAPDELVAVASTLYASRRMKNFFMDMPVTLI 114
Query: 88 LDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM 146
+ L Y+ + +L+N NF+ + + G D + +L E IR + R
Sbjct: 115 I----LLGYAEKINVLRNVENFIENIVNEQGQIRDDASVELLHVRRE----IRLSQSRIK 166
Query: 147 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
+ LD +L+ Q + L+T R R + IK ++ P GI + S+SGAT F
Sbjct: 167 DKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQEYRNHFP-GIIHDQSASGATVF 221
Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
+EP V NN +L+++E E IL T +IA I D + ID AFA+A
Sbjct: 222 VEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANVSETIYMNCDMLANIDFAFAKAK 281
Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
+ M PI++++ +V N+ +HPL+
Sbjct: 282 LSLTMQASMPIINNKGYV------NLRQARHPLIE------------------------- 310
Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
+D VPIDI + + ++ITGPNTGGKT ++KTLGL +LM++AGLY+P
Sbjct: 311 ----------ADVVVPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALMTQAGLYIPV 360
Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
+N + F+ I ADIGD QS+EQ+LSTFS H++ +V IL +S E LVLIDEIG+GTDP
Sbjct: 361 QNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQISSEDLVLIDEIGAGTDP 420
Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
EG ALA SIL++L + + TTHY++L ENA+ EF ++TLRPTYR+L
Sbjct: 421 DEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQGIENASVEFDIQTLRPTYRLLI 480
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
G G SNA I+K +G +II++A + +++ H + E + +EE++
Sbjct: 481 GVPGSSNAFAISKRLGLSDRIIEQASQFIDK------DHAEFETVLNALEEQK 527
>gi|403379972|ref|ZP_10922029.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. JC66]
Length = 788
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 297/555 (53%), Gaps = 87/555 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I D+ + A G LL+P+E+ TL G L+R+ +L++
Sbjct: 68 IRDVRPSVKRAKIGGLLNPAELLDTANTLNG---------------GRRLKRF--ILQMA 110
Query: 104 KNCNFLTELEEKIGFCIDCKLLI------------ILDRASEDLELIRAERK----RNME 147
++ LT L +K +D K L ++D AS++L IR E + R E
Sbjct: 111 EDHE-LTLLADKAAQVMDLKDLADSILAKINEHAEVMDSASQELARIRQELRTGEARIRE 169
Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
L+ +++ + Q + P+IT R R + +K ++ + G+ + S+SGAT FM
Sbjct: 170 KLEQMIRTPSTQKM----LQDPIITIRNDRYVIPVKQEYRSSI-GGMIHDQSASGATLFM 224
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
EP+ V+ NN LS E E IL +LTAE+A++ EI + +D + E+D FA+AG
Sbjct: 225 EPQAVVQLNNRLRELSFKEEREIEKILGMLTAEVAEAADEIAFNLDILAELDFIFAKAGL 284
Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
A+ P+++ + + I+ +HPL+
Sbjct: 285 AREFKATLPLMNDRGF------LKIKKGRHPLI--------------------------- 311
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
+D VP+D+++ + + ++ITGPNTGGKT ++KT+GL SLM+ +GL++PA+
Sbjct: 312 --------AADAVVPLDVELGNQFQSIIITGPNTGGKTVTLKTIGLLSLMAMSGLFVPAE 363
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
+ +L FD I ADIGD QS+EQ+LSTFS H++ I+ IL+ ++ +SLVL+DE+G+GTDP+
Sbjct: 364 DSSQLCVFDGIFADIGDEQSIEQSLSTFSSHMTNIISILKEMTPKSLVLLDEVGAGTDPA 423
Query: 448 EGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
EG ALA SIL+ + R+G +V TTHY++L + NA+ EF ++TL PTYR+L
Sbjct: 424 EGSALAISILEAIH-RLGCRMVATTHYSELKAYAYERKGIVNASMEFDVQTLSPTYRLLV 482
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
G G SNA IA+ +G D+KII A+ V R + +L E R E++ +
Sbjct: 483 GVPGRSNAFAIAERLGLDKKIIDHARSQV-----GADDQRVESMIATLEENRLSAEAERK 537
Query: 567 TAASLHAEIMDLYRE 581
+A L+AE+ L ++
Sbjct: 538 SAEQLNAEVAALRQQ 552
>gi|384246104|gb|EIE19595.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 500
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 175/438 (39%), Positives = 243/438 (55%), Gaps = 55/438 (12%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
L L +I CI +LD AS L RA R++N+ L S +++ A + + G ++
Sbjct: 40 LPGLASQIWRCISAGDGRVLDGASSALADTRARRQQNLGELRSTIEEWARSMHRLGAAER 99
Query: 169 PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+ RR R+CV +KA + LP G + L SS+GAT++M+P V NN E L+ E
Sbjct: 100 AQVVVRRDRLCVALKAGRQSDLPKGSVTLATSSTGATFYMDPAPTVPLNNAEAVLAAQER 159
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
E IL+ L+A +A + I ++D V +D+ AR A W GV
Sbjct: 160 EEVARILAHLSAAVADNAARIWQVLDAVTALDICSARGRHAVWCGGV------------- 206
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
LR L + N GS+ + + P +D V
Sbjct: 207 ----------------RLRFLLPEVAAQN-------------GSV-QVLQPPPRAVDFTV 236
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK-----------NHPRLPWFD 396
RVV +TGPNTGGKTAS+K LGLA+LM KAGL+LP + + P + WFD
Sbjct: 237 PAGVRVVTVTGPNTGGKTASLKALGLAALMPKAGLFLPLEPTPGKGPPTPFDAPAVAWFD 296
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
++LAD+GD QSL+Q+LSTFSGHI R+ IL ++R SLVL+DE GSGTDP+EG ALA+++
Sbjct: 297 MVLADVGDGQSLQQSLSTFSGHIRRVRAILAALTRRSLVLLDEAGSGTDPAEGAALASAL 356
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L DR L + TTH+A L L D+RF NA EF L +LRPTYR++WGS G SNAL
Sbjct: 357 LAALADRAALTLATTHHASLKDLAANDSRFCNAGVEFDLASLRPTYRLIWGSVGASNALA 416
Query: 517 IAKSIGFDRKIIQRAQKL 534
+A+ +GFD ++ A+K+
Sbjct: 417 VAEGLGFDPLVVAEARKV 434
>gi|302389949|ref|YP_003825770.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
gi|302200577|gb|ADL08147.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
Length = 790
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 295/584 (50%), Gaps = 81/584 (13%)
Query: 26 QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSE---ICAVRRTLRAVNNVWKK 81
+TS + +++S + L+ + DI L A G +L+ E I +V +T R V N W +
Sbjct: 49 ETSEGVTILRSGINIPLNELPDIRTSLKRATMGAVLTTGELLSIASVMKTSRLVKNTWSE 108
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+ + +++ + + LE+KI I + I D AS L IR E
Sbjct: 109 ---------KGIAECRIIGSIIEEIHIFSSLEDKIHKAIISENEIA-DGASPRLSAIRKE 158
Query: 142 RK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
++ R E L+ + Q F + +P+IT R SR + +K + +P G+ +
Sbjct: 159 KRILFQRAKEKLELYISSPQYQKF----LQEPIITIRNSRYVIPVKQEFRSSIP-GVIHD 213
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT ++EP ++ NN RL E E IL + +IA++ ++ + ++
Sbjct: 214 QSASGATLYLEPMPVLQINNELRRLEIEEQKEMEQILREFSEKIAENREYLEVTFEGLVR 273
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D A+A ++ + GV P L+S+ + INI +HPLL G
Sbjct: 274 LDFILAKAKYSMDIKGVEPGLNSRGY------INIRKGRHPLLRGEV------------- 314
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
VPIDI + E V+VITGPNTGGKT S+KT+GL +LM
Sbjct: 315 -----------------------VPIDIYLGDEFTVLVITGPNTGGKTVSLKTVGLFALM 351
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
++AGL+LPA+ L F+ + ADIGD QS+EQ+LSTFS H+ I DI++ SLVL+
Sbjct: 352 AQAGLHLPAEEGTELSVFNEVFADIGDEQSIEQSLSTFSSHMKNIKDIVDKADSRSLVLL 411
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP+EG ALA +IL Y ++ V TTHY++L R ENA+ EF +ET
Sbjct: 412 DELGAGTDPTEGAALAMAILDYFCEKGTRVVATTHYSELKAFAYSMERMENASVEFDVET 471
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV----------------ERLRPE 541
L PTYR+ G G SNA IAK +G R+II+ A+ + ER R +
Sbjct: 472 LSPTYRLTIGIPGKSNAFEIAKRLGLKREIIELARSFLNRENIQLEDLLKGLEQERERAK 531
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTS 585
R++ EL + M ++LE + + +I+ RE + S
Sbjct: 532 REKEEIQELKKQYMMRLKELEDEKEKLRNREEKILAKAREKARS 575
>gi|147678274|ref|YP_001212489.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
gi|238686642|sp|A5D0W6.1|MUTS2_PELTS RecName: Full=MutS2 protein
gi|146274371|dbj|BAF60120.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
Length = 785
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/516 (35%), Positives = 268/516 (51%), Gaps = 60/516 (11%)
Query: 25 NQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
+TS +++ +P + +DI L A G +L P E+ AV TL A + K
Sbjct: 48 EETSEGRKLLRLEPFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTIRKFFQ 107
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---- 139
D ++Y L E+ L ELE KI I + D AS +L IR
Sbjct: 108 -------DRQEQYPLLYEVSSALVSLPELERKIKNAI-LPGGEVADGASPELAQIRRRLA 159
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
A + + E+L+ +++ + Q + + +P++T R R V +K H+ +P GI + S
Sbjct: 160 AAQAQVKEHLEHIIRSPSYQKY----LQEPIVTIREGRYVVPVKIEHRSQVP-GIVHDQS 214
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT F+EP VE NN RL +E E IL+ L+A +A+ I ++ + E+D
Sbjct: 215 ASGATLFIEPMAVVEKNNELRRLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELD 274
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
ARA ++Q +D P+L ++ ++I +HPLL G
Sbjct: 275 FIMARARYSQKLDAWAPLLEG------EACMDIRRGRHPLLQGEV--------------- 313
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPIDI++ + +VITGPNTGGKT ++KT GL LM++
Sbjct: 314 ---------------------VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQ 352
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL++PA RL F + ADIGD QS+EQ+LSTFS H++ IV+I+ +SLVL+DE
Sbjct: 353 SGLHIPAGEGSRLGIFRQVFADIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDE 412
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP+EG ALA SIL+ L V TTHY +L R ENA+ EF TLR
Sbjct: 413 LGAGTDPAEGAALAQSILEKLHSAGAKTVATTHYGELKDFALTRERVENASVEFDAITLR 472
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
PTYR+L G G SNA IA +G ++++RA+ +
Sbjct: 473 PTYRLLIGKPGRSNAFEIAARLGLPEEVVKRARSFL 508
>gi|357039259|ref|ZP_09101053.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355358158|gb|EHG05926.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 788
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 264/481 (54%), Gaps = 61/481 (12%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G LL P E+ V +TL A + +E DS Y+ L E+ +LE+ I
Sbjct: 81 GALLDPQELWHVLQTLTACRQIKNFFSERQ----DS---YTRLNEIAMGLGSFKDLEKMI 133
Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
I +LDRASE L IR + ++R + L+ +++ + Q + + P++T
Sbjct: 134 ASAI-APGGEVLDRASERLFNIRRRLASAQQRIKDRLNEIIRSTSYQKY----LQDPIVT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEET 231
R R V +K ++ LP GI + S+SGAT F+EP VE NN EVR L E E T
Sbjct: 189 MREGRYVVPVKQEYRSQLP-GIVHDQSASGATLFIEPMPVVEANN-EVRGLMAEEKQEVT 246
Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL+ L+A + + E+ Y ++ + +D A+A +++ +D P +++ ++ ++
Sbjct: 247 RILTELSAAVGRQAEELLYALENLARLDFIMAKARYSESLDAWAPCIAT------EAKLD 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
I +HPLL P+K+ VPI I++
Sbjct: 301 IRQGRHPLL----------------PVKA--------------------VPISIQLGEAF 324
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
++VITGPNTGGKT S+KT+GL LM+ +GL++PA++ + FD + ADIGD QS+EQ+
Sbjct: 325 DMLVITGPNTGGKTVSLKTVGLLVLMAHSGLHVPAEDGTLIGMFDQVFADIGDEQSIEQS 384
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LSTFS H IV+IL+ +SLVL+DE+G+GTDP+EG ALA +IL LR + V TT
Sbjct: 385 LSTFSSHTINIVNILKKAGNKSLVLLDELGAGTDPTEGSALARAILDQLRQQGAKVVATT 444
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY +L + R ENA+ EF+ +TLRPTYR+L G G SNA IA +G + +IQRA
Sbjct: 445 HYGELKSYAFANERVENASVEFNSQTLRPTYRLLIGRPGRSNAFEIALRLGLNESVIQRA 504
Query: 532 Q 532
+
Sbjct: 505 R 505
>gi|169831532|ref|YP_001717514.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638376|gb|ACA59882.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
Length = 784
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 301/593 (50%), Gaps = 77/593 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
L+E ++L +T +++ +P D D+ + A GQ+L + + +TL A
Sbjct: 42 GLDEVRRLQAETDEGYNILRLEPNADFGGWHDVREPVRRAARGQVLDGGPLFQIGQTLAA 101
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K L D RY L L ELE+++ I + D AS
Sbjct: 102 IRTQKKFLM-------DRRDRYPLLAGLAGTMPVFPELEKRLVESI-LPGGEVADGASAR 153
Query: 135 LELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L +R A R + E L+ L++ +A Q + + +P+IT R R V +K ++ +
Sbjct: 154 LADLRRRLQAGRLQVREQLERLVRSLAQQKY----LQEPIITIREGRYVVPVKIEYRNQV 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ + S+SGAT F+EP V+ NN RL +E E IL+ L+ +A++ EI
Sbjct: 210 P-GLVHDQSASGATLFIEPMAVVDKNNELRRLEAAEKQEILKILTELSTAVAQAADEILP 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+D++ D A+A ++ M V P+L + + F + +HPL+ G+
Sbjct: 269 AVDQLGHFDFVLAKARLSRQMAAVPPLLEDGAFLEFSRA------RHPLIRGNV------ 316
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VPID +V + ++V+TGPNTGGKT ++KT
Sbjct: 317 ------------------------------VPIDGRVGRDFDLLVLTGPNTGGKTVALKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL LM++AGL++PA + + FD + ADIGD QS+E +LSTFS H++ +VDI+ V
Sbjct: 347 IGLLVLMAQAGLHVPASSCA-VGLFDRVFADIGDEQSIENSLSTFSSHMANLVDIIGQVG 405
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVLIDE+G+GTDP+EG ALA +IL L R VVTTHY +L R ENA+
Sbjct: 406 AKSLVLIDELGTGTDPTEGAALAQAILNELHRRGTRGVVTTHYGELKEFATGRDRVENAS 465
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF L+TL PT+R++ G G S A IA +G I+ RA++ L PE++Q +EL
Sbjct: 466 VEFDLDTLEPTFRLVTGRPGRSYAFEIALRLGMPESIVSRAREF---LAPEQRQ--TAEL 520
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSK 603
+ L E R++ E Q A R+++ ASI RY+ + S L K
Sbjct: 521 LRQLEESRQEAERQREEA-----------RKEAREASILKQRYEAELASLLDK 562
>gi|121534235|ref|ZP_01666060.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
gi|121307338|gb|EAX48255.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
Length = 789
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 264/510 (51%), Gaps = 60/510 (11%)
Query: 33 MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS 92
++ S + DI IL G +L P E+ A+ TL A + + LTEA
Sbjct: 62 LLASSHVPFGGARDIRAILRRLEIGAVLEPEELLAIASTLYAARRLKQFLTEA------- 114
Query: 93 LQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNME 147
+ S LL E L LE I + + I+ D AS +L IR E ++R E
Sbjct: 115 -KPSSVLLTEKAGRITALRNLEAAIESTV-SEQGIVRDEASVELTRIRREIRVAQQRVKE 172
Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
LD +L Q + + L+T R R + IK H+Y P GI + S+SGAT F+
Sbjct: 173 KLDQILHSAEYQKY----FQEALVTIRGDRYVIPIKQEHRYHFP-GIVHDQSASGATVFI 227
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
EP V NN +L +E E IL+ L++++A+ I+ + V +D AFA+A
Sbjct: 228 EPMAVVNLNNDIKQLVAAEKNEVERILAALSSQVARHVDAIRQNSEIVAALDFAFAKAKL 287
Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
M P+L+ + + + +HPL+ P
Sbjct: 288 GLDMQANMPLLNDKGRIFLRQA------RHPLI----------------P---------- 315
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
D VPID+++ + +++ITGPNTGGKT ++KT+GL +LM++AGL++PA
Sbjct: 316 ---------RDEVVPIDVRLGEDFSILLITGPNTGGKTVTLKTVGLFALMTQAGLFIPAG 366
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
+ +P F + ADIGD QS+EQ+LSTFS H++ +V IL VS LVLIDEIG+GTDP
Sbjct: 367 SGSEMPVFRNVFADIGDEQSIEQSLSTFSAHMTNLVKILAKVSAHDLVLIDEIGAGTDPG 426
Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
EG ALA +IL+YL + TTHY++L ENA+ EF + TLRPTYR+ G
Sbjct: 427 EGAALAMAILEYLHSAGARTIATTHYSELKTFAYSRHGIENASVEFDIHTLRPTYRLQIG 486
Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVER 537
G SNA I++ +G +++I RA++ +++
Sbjct: 487 IPGSSNAFAISRRLGLPQELIDRARQFLDK 516
>gi|269837731|ref|YP_003319959.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
gi|269786994|gb|ACZ39137.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
Length = 800
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 273/523 (52%), Gaps = 61/523 (11%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK- 80
LL T A+ ++ + P + + DI ++ A G LLS ++ T++A + +
Sbjct: 46 LLAVTREAVTLLTTYPSFTVGGVRDIRPLVERARRGSLLSAGDLRDALDTIQAARELRRT 105
Query: 81 --KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
K+ +A EL Y L E ++ L LE +G + + I LD ASE L I
Sbjct: 106 FFKIPDANEL-------YPNLSEFVEAIADLAGLEADLGRTVGPRGEI-LDTASERLAEI 157
Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R E +R ++ L+ +L A AG I ++T R R + ++A + +P G+
Sbjct: 158 RREVRIAHRRLLDRLNRMLTDAA----YAGAIQDAIVTMREGRYVIPVRADRRAQIP-GV 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
S+SG T F+EP VE NN L +E E AIL + +IA + ++ ++
Sbjct: 213 VHATSASGQTLFVEPMAVVELNNRWRELQMAEEHEIEAILRARSDQIAAAADDLDQTVEA 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLS 309
V IDLA A+A A M V PIL S I++ +HPLL
Sbjct: 273 VAAIDLALAKARLAFSMRAVEPILVEASGPGAPGGHPRHRIDLRQARHPLL--------- 323
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P D VPID+++ R++V+TGPNTGGKT ++K
Sbjct: 324 ------DP--------------------DTVVPIDVRIGETYRILVVTGPNTGGKTVALK 357
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM++ GL++PA + L F + ADIGD QS+EQ+LSTFS H+++I+ +L
Sbjct: 358 TVGLLTLMAQTGLFIPAADGSALSVFSAVYADIGDEQSIEQSLSTFSAHVTKIIAMLRSA 417
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL+DEIG+GTDP EG ALA +I+ L +R +A+VTTHY++L ENA
Sbjct: 418 DADSLVLLDEIGAGTDPQEGSALARAIISALLERGVIAMVTTHYSELKAFAYVTEGTENA 477
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF L L PTYR+L G G SNAL IA+ +G R++I+ A+
Sbjct: 478 SVEFDLRNLSPTYRLLLGVAGQSNALAIAERLGMPREVIEAAR 520
>gi|427702746|ref|YP_007045968.1| MutS2 family protein [Cyanobium gracile PCC 6307]
gi|427345914|gb|AFY28627.1| MutS2 family protein [Cyanobium gracile PCC 6307]
Length = 820
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 243/444 (54%), Gaps = 64/444 (14%)
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 157
L+ L ELE+++ FC++ + + DRAS LE +R A R + L L+++
Sbjct: 127 LVAELRTLPELEQRLHFCLE-EGGRVADRASGPLEAVRRQLLALRAERRDRLQELVRRYG 185
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + ++++R R + +KA + G+ + S+SG+T ++EP+ + N
Sbjct: 186 SLL------QDTVVSERGGRPVLAVKAGAAAQV-GGLVHDSSASGSTVYVEPQAVIPLGN 238
Query: 218 MEVRLSNSEIAE---ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
R+ ++E E E + S L+A + + + +L ++ ID ARA + QW+ V
Sbjct: 239 ---RIRDAEGQERELERQVRSELSALVGEQAEPLDHLQQVLVRIDAGLARARYGQWLGAV 295
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L+ S D+ + ++HPLLL R P+
Sbjct: 296 RPELAD----SADAPFELCDLRHPLLLWQERRE------GGRPV---------------- 329
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+ I+V E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP PRLPW
Sbjct: 330 ------VPVTIRVGPELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCAGTPRLPW 383
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV--------------SRESLVLIDEI 440
+LADIGD QSL+QNLSTFSGHI RI IL + SLVL+DE+
Sbjct: 384 CGQVLADIGDEQSLQQNLSTFSGHIRRIARILAALPAGAGFPEGAALPQGPASLVLLDEV 443
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP+EG ALA ++L++L DR L V TTH+ +L LK D RFENA+ F +ETL P
Sbjct: 444 GAGTDPTEGSALAAALLRHLADRARLTVATTHFGELKALKYADPRFENASVAFDVETLSP 503
Query: 501 TYRILWGSTGDSNALNIAKSIGFD 524
TYR+ WG G SNAL IA +G D
Sbjct: 504 TYRLQWGIPGRSNALAIASRLGLD 527
>gi|430749370|ref|YP_007212278.1| MutS2 family protein [Thermobacillus composti KWC4]
gi|430733335|gb|AGA57280.1| MutS2 family protein [Thermobacillus composti KWC4]
Length = 784
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 293/559 (52%), Gaps = 71/559 (12%)
Query: 25 NQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
++ SAA + + P I D+ L A G L+P+E+ + T R V + + +
Sbjct: 51 DEASAAERLKGAPPF--GGIADVRAALKRAKIGGKLNPAELLEIASTARGGRLVKRHIAQ 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAE 141
E PLL L LTE LEE I CID + ++ D+AS +L IR E
Sbjct: 109 IHE------DHPLPLLHGL--AGQLTEHRALEESIARCIDEQAYVV-DQASPELAAIRRE 159
Query: 142 RK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ R E L+ L++ + Q + +IT R R + +K ++ GI +
Sbjct: 160 LRGGEARIREKLEQLVRSPSVQKM----LQDAIITIRGDRFVIPVKQEYRGHF-GGIVHD 214
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S SGAT F+EP+ V+ NN L +E E IL LTAE A+ ++ ++ + +
Sbjct: 215 QSGSGATLFIEPESIVQMNNKLRELKMAEEREIERILLRLTAETAEHADDLAANLELLGQ 274
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D AFA++ A+ M P ++ + + +HPLL S+
Sbjct: 275 LDFAFAKSRLAREMRASLPRMNDRGFLKLKRG------RHPLLPPESV------------ 316
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
VP+D+++ ++ITGPNTGGKT ++KT+GL SLM
Sbjct: 317 -----------------------VPLDVELGNSYTAIIITGPNTGGKTVTLKTIGLLSLM 353
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+ +GL++PA + +L FD I ADIGD QS+EQNLSTFSGH++ I+ +L ++ +SLVL+
Sbjct: 354 AMSGLFVPADDGSQLCVFDAIYADIGDEQSIEQNLSTFSGHMTNIIRMLREMTPKSLVLL 413
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA +IL+++ R+G +V TTHY++L NA+ EF ++
Sbjct: 414 DELGAGTDPAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYNRKGIINASMEFDVQ 472
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA IA+ +G R II+RA+ V R ++ SL E
Sbjct: 473 TLSPTYRLLVGVPGRSNAFAIAERLGLPRSIIERARGEV-----SEDDRRVEDMIASLEE 527
Query: 557 ERRKLESQARTAASLHAEI 575
+R+ E++ +TA SL AE+
Sbjct: 528 DRQSAEAERQTAESLRAEM 546
>gi|269926462|ref|YP_003323085.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790122|gb|ACZ42263.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
Length = 794
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 278/522 (53%), Gaps = 56/522 (10%)
Query: 25 NQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
+T+ AL ++Q +P + + DI ++ A G +L PSE+ + T+ A N+ ++L
Sbjct: 50 RETTEALRVLQLKPDITIGGARDIRSLVTKASLGGVLDPSELLQISDTIAAANSFSRQLG 109
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
+ E D DS +S L L++ L++L ++I ID + + D AS L IR++ +
Sbjct: 110 KVLE-DADS---FSLLSAQLRHIVDLSDLRKQIDAAIDDQAQV-RDSASTTLARIRSQLR 164
Query: 144 ----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
R M++L+SL+ + + + +P+IT+R R V ++A ++ +P GI +VS
Sbjct: 165 SAHDRLMQHLNSLISSSSYR----DALQEPIITQRDGRYVVPVRADARHRIP-GIVHDVS 219
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SG T F+EP V+ N L E E IL+ L+ +A +I + + +D
Sbjct: 220 GSGQTLFVEPLATVDMGNRITELRRQESEEIERILAQLSEAVASVASDIMRTLLALARLD 279
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
A A+A F+Q + P L S + + + +HPLL
Sbjct: 280 FALAKAKFSQHLHACEPELVSAEYEG--DKLFLPDARHPLL------------------G 319
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
DV VPI I + + RV+VITGPNTGGKT ++KT GL SLM+
Sbjct: 320 RDV------------------VPITIFLGGDFRVLVITGPNTGGKTVALKTTGLLSLMAL 361
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL+LP R+P ILADIGD QS+EQ+LSTFS H+ I +LE+ ++L+L+DE
Sbjct: 362 SGLHLPTSERARVPVLKYILADIGDEQSIEQSLSTFSSHVINIKKMLEVAGPDTLLLLDE 421
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP EG A+A +I+ YL ++ L V TTHY ++ NAA EF LETL
Sbjct: 422 LGAGTDPEEGAAIAEAIIDYLLEKRALVVATTHYPEIKVYAQTTPGVTNAAVEFDLETLS 481
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
PTYR+ G G S A++IA+ +G + +I+ A+ R+ PE
Sbjct: 482 PTYRLTIGLPGRSYAIDIAQRLGLPKVVIEAAKS---RVSPE 520
>gi|304436503|ref|ZP_07396477.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370549|gb|EFM24200.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 785
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 273/519 (52%), Gaps = 60/519 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT---LRAVNNV 78
+L +T A+ + Q QP I + IL A G LL E+ V+ T +R V
Sbjct: 45 RLQRETEEAVRVAQIQPPPFDGIHHLQEILKRAGRGILLELDELRLVKSTIGGMRDVKCF 104
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
++ L+ AEL D L R +L +L+ N ++E F D +L R + +L
Sbjct: 105 FRDLSADAELLKD-LARRIEILGMLER-NLKAAIDEYGNFRDDAS--PVLRRITNEL--- 157
Query: 139 RAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
R + R E L S+L A Q +FQ + ++T R R + +K ++ P G+ +
Sbjct: 158 RTAQSRVKERLSSILHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-GVIHD 211
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT F+EP VE NN ++ + E I+ LT EIA+S + + +
Sbjct: 212 QSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADVLSANCTILSD 271
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+DL FARA A+ M PIL+ D +++ +HPLL P
Sbjct: 272 LDLIFARASLAREMSAYPPILNR------DGYVHLRRARHPLL----------------P 309
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
D VPIDI++ ++ITGPNTGGKT SMKTLG+ +LM
Sbjct: 310 -------------------PDKVVPIDIELGKTFSTLLITGPNTGGKTVSMKTLGILALM 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
S++G +LPA++ +P + I ADIGD QS+EQ+LSTFS H IV I++ + LVL+
Sbjct: 351 SQSGCFLPAESGSEIPIYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATFGDLVLL 410
Query: 438 DEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SI++ +L +R+ V TTHYADL ENA+ EF L+
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVEFDLK 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TLRPTYR+L G G SNA +I++ +G +I+ RA++ V
Sbjct: 470 TLRPTYRLLIGIPGASNAFSISRQLGLPEEIVARAEEYV 508
>gi|150389498|ref|YP_001319547.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
gi|229486330|sp|A6TNX0.1|MUTS2_ALKMQ RecName: Full=MutS2 protein
gi|149949360|gb|ABR47888.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
Length = 789
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 270/524 (51%), Gaps = 53/524 (10%)
Query: 15 KSLEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+S E +L ++TS A +++ Q + L I DI L G L P E+ V+ TLR
Sbjct: 38 QSFGEITQLQSETSEAQSILIQRGNIPLGGIHDIKQYLRKTEIGSYLDPKELLLVKDTLR 97
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRA 131
N+ E GD ++ + L++ +E++I CI D + I D A
Sbjct: 98 TARNLKSFFKE-----GDDQTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTE---ISDHA 149
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S L+ IR + + + + L + + +IT R+ R V +K H+ +P
Sbjct: 150 SSTLKNIRRQISSKNDAVRNKLNGIINSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVP 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
G+ + SSSGAT F+EP V+ NN L E E IL + IA+ E++
Sbjct: 210 -GLIHDQSSSGATLFVEPMAVVQLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNN 268
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ ID FA+ + M GV P+L+ + +++I+ +HPLL
Sbjct: 269 QIILTAIDFVFAKGKLSLEMKGVEPLLN------VEGNVHIKNGRHPLL----------- 311
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+D VP ++ + + +VITGPNTGGKT ++KTL
Sbjct: 312 ------------------------NADEVVPTNLWIGETFQTLVITGPNTGGKTVTLKTL 347
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL S+M+++GL++PA RL FD I ADIGD QS+EQ+LSTFS H++ IV+I+E V+
Sbjct: 348 GLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTS 407
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SLVL DE+G+GTDP+EG AL +IL +LR+ V TTHY++L + ENA+
Sbjct: 408 NSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASV 467
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
EF + TL PTYR+L G G SNA I+K +G ++QRA++ +
Sbjct: 468 EFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFL 511
>gi|160893752|ref|ZP_02074536.1| hypothetical protein CLOL250_01306 [Clostridium sp. L2-50]
gi|156864737|gb|EDO58168.1| MutS2 family protein [Clostridium sp. L2-50]
Length = 791
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 237/442 (53%), Gaps = 49/442 (11%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
DSL YS +EL+ L L ++I CI + I D AS L+ +R +K E L
Sbjct: 117 DSL--YSRFMELVP----LEHLSQEIHRCILSESEIA-DDASSGLKAVRRNKKLTNEKLH 169
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ L K+ + LIT R R C+ +K +K P G+ + SSSG T F+EP
Sbjct: 170 NQLNKLVTDQSKQTMFQDNLITMRNGRYCIPVKQEYKNSFP-GMIHDQSSSGNTVFIEPL 228
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L N E+AE IL L+A A IK+ + + ++D FARA FA+
Sbjct: 229 AVVNLNNQLKELDNQELAEIEKILENLSARAASEYENIKFDFETLTDLDFIFARANFARS 288
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
G PI ++ D ++I+ +HPLL + TV
Sbjct: 289 YKGTEPIFNT------DGIVDIKQGRHPLL------------------------DKHTV- 317
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VP+DI++ + +++ITGPNTGGKT S+KTLGL +LM ++GL++PA +
Sbjct: 318 ----------VPVDIRLGEDYNLLIITGPNTGGKTVSLKTLGLFTLMGQSGLHIPALDGS 367
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
RL FD + ADIGD QS+EQ+LSTFS H+S +V I+ V+ +L L DE+G GTDP EG
Sbjct: 368 RLNVFDDVFADIGDEQSIEQSLSTFSSHMSNVVYIMNHVTPNTLCLFDELGGGTDPVEGA 427
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA +IL L D+ + TTHY++L +NA+ EF + TL PTYR++ G G
Sbjct: 428 ALAIAILSSLNDQDIRCMATTHYSELKLFAMSTPGVQNASCEFDVATLMPTYRLIIGIPG 487
Query: 511 DSNALNIAKSIGFDRKIIQRAQ 532
SNA I+K +G II+RA+
Sbjct: 488 KSNAFAISKKLGLSDDIIERAK 509
>gi|427405780|ref|ZP_18895985.1| MutS2 family protein [Selenomonas sp. F0473]
gi|425708621|gb|EKU71660.1| MutS2 family protein [Selenomonas sp. F0473]
Length = 785
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 289/589 (49%), Gaps = 84/589 (14%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A+ ++Q Q I D+ IL A G +L E+ + T++ + N+ K
Sbjct: 45 RLHEETAEAVRVLQIQTPPFGGICDLRHILQKATLGSVLEVEELREIMSTMQGMRNI-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AE + L+ + +E+L LE ++ ID R LEL R
Sbjct: 104 FFRDAEFELPLLKEQTIRIEILGM------LERRLQNTIDEHGNF---RDDASLELRRVT 154
Query: 142 RK------RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R+ R E L ++L A Q FQ +P+IT R R + +K ++ P G+
Sbjct: 155 RELVSAQGRVKEKLSAILHDAAYQKCFQ-----EPIITVRDERYVIPVKQEYRNQFP-GV 208
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT F+EP VE NN ++ + E IL LT EIA S +
Sbjct: 209 IHDQSASGATLFVEPLATVELNNTVRQMEIAREHEIQRILQQLTQEIASSSDILSENCTI 268
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FARAG A MD P+ + +V + +HPLL +
Sbjct: 269 LAGLDFIFARAGLAHNMDAYAPVFNRSRYVRLRRA------RHPLLPKEQV--------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VPIDI++ + V++ITGPNTGGKT SMKTLG+
Sbjct: 314 --------------------------VPIDIELGRDFSVLLITGPNTGGKTVSMKTLGIL 347
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++G +LP LP + I ADIGD QS+EQ+LSTFS H IV IL+ E L
Sbjct: 348 ALMAQSGCFLPTAPGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAGGEDL 407
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL+DE+G+GTDP EG ALA SI++YL + V TTHYA L NA+ EF
Sbjct: 408 VLLDEVGAGTDPDEGAALARSIIEYLLHKHISVVATTHYAALKTYAYGRKGVMNASVEFD 467
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQ 543
+ TLRPTYR+L G+ G SNA +I++ +G ++I+ RAQ+ +V L E++
Sbjct: 468 IATLRPTYRLLIGTPGASNAFSISRRLGLSQEIVARAQQYINEDHVRFEIIVNELEQEKR 527
Query: 544 QHRKS-------ELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTS 585
++ K E S++EER +E A H +++ RE++ +
Sbjct: 528 EYEKKHNELRVREQKFSVLEERLHIERDKFIHA--HRDLLHKAREEANN 574
>gi|168187371|ref|ZP_02622006.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
str. Eklund]
gi|169294704|gb|EDS76837.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
str. Eklund]
Length = 785
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 293/571 (51%), Gaps = 63/571 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
P+ + E + L+ A ++ S + DI ++ A L PSE+ V
Sbjct: 36 PYESAYEVREHLMETEEAFKISIKKGDAPFSGLYDIREAISKAQRRFTLFPSELLRVANL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
LRA + +K ++ +L+ ++Y L + + L LEE+I CI + I DRA
Sbjct: 96 LRA-SRRFKGYVKSDDLN----EKYEVLESITEGLVPLNGLEEEISKCIIGEEEI-SDRA 149
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L IR R++++ S +K + + + + + + T R R + +K HK
Sbjct: 150 SSTLFNIR----RSLKDKTSSIKARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGA 205
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+P G+ + SSSGAT F+EP V+ NN L E AE IL+ L+ ++ ++ IK
Sbjct: 206 VP-GLVHDQSSSGATLFIEPMSLVDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIK 264
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
D + E+D FA+A +AQ + + PI+S H NI KHPL+
Sbjct: 265 VDADILWELDFIFAKAKYAQKLGAIMPIISEDGH------FNIINAKHPLI--------- 309
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P K VEN+ L GI+ VVITGPNTGGKT ++K
Sbjct: 310 ------DP-KKVVENNIY----LRDGITS---------------VVITGPNTGGKTVTLK 343
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+G+ +M+ +GL + A + +F + ADIGD QS+EQ+LSTFS H++ IV+I+E
Sbjct: 344 TVGVLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIESA 403
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K ENA
Sbjct: 404 DENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENA 463
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRK 547
+ EF +ETLRPTYR+L G G SNA I+K +G II+ A++ + E L+ E
Sbjct: 464 SVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFE------ 517
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDL 578
+L QSL + K + AR A E + L
Sbjct: 518 -DLIQSLQHKNIKAQEHARKAEGAREEAVKL 547
>gi|159901402|ref|YP_001547649.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
gi|159894441|gb|ABX07521.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
Length = 806
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 288/557 (51%), Gaps = 67/557 (12%)
Query: 26 QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+TSAA A+++S + + D+ + A G +L S + + TL A+
Sbjct: 50 RTSAARALIESFADVSIGGARDVRPAVEHARRGGILEASRVQEIAATLGAMRR------- 102
Query: 85 AAELDGDSLQRYS------PLLELLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLEL 137
L G L+ + PL E L N L E+E IG D + +LD AS +L
Sbjct: 103 ---LRGQVLRNHPDFVPLHPLAEQLPNLATLEHEIERTIG--PDGE---VLDSASAELGR 154
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+R+ + L L+ + A + +P+IT R R V +KA + L GI +
Sbjct: 155 LRSAIRVAFNRLQERLQAIINSSQYADVLQEPIITVRDGRYVVPVKAPQRRAL-RGIVHD 213
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
SSSGAT ++EP VE NN L +E E IL+ L+ +IA I ++ E
Sbjct: 214 QSSSGATLYIEPLATVELNNQWRELQLAEREEIQRILAALSGKIANEGMPIIVGVEATAE 273
Query: 258 IDLAFARAGFAQWMDGVCPILSSQ---SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+DLAFA+A ++ + P +++ + +S++++ +HPLL
Sbjct: 274 LDLAFAKAKYSISLRASQPAINTPVPADDLHPESTLSLLKARHPLL-------------- 319
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
D VP D+ + T++++ITGPNTGGKT ++KT+GL
Sbjct: 320 ---------------------NQDLVVPTDVWLGGPTQMIIITGPNTGGKTVALKTVGLM 358
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++AGL++PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ IL+ V+ +SL
Sbjct: 359 ALMAQAGLHIPAHQGSRLPIFGKIFADIGDEQSIEQSLSTFSSHMTNIIQILDRVTPDSL 418
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL DE+G+GTDP EG ALA +I++ L + LA+ T+HYA+L ENA+ EF
Sbjct: 419 VLFDELGAGTDPVEGAALARAIIERLLNVGCLAMATSHYAELKAFAYSTDGVENASVEFD 478
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR+ G G SNAL IA+ +G R +I+RA+ + R + +L ++
Sbjct: 479 VETLSPTYRLSIGLPGRSNALAIAERLGLKRDLIERARATI-----SRDNVQVEDLLAAI 533
Query: 555 MEERRKLESQARTAASL 571
ER ES+A A L
Sbjct: 534 HRERTTAESEAARALEL 550
>gi|357011634|ref|ZP_09076633.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus elgii B69]
Length = 795
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 284/551 (51%), Gaps = 85/551 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS-PLL-E 101
I DI ++ A G +L+P E+ + T + + + L EA D YS PLL +
Sbjct: 75 IRDIRAAVHRARIGGMLNPVELLDIAMTSQGGRRLGRFL-EATNED------YSIPLLLD 127
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVA 157
LL+ ELEE+I C+D + +D AS +L IR E + + E L+ +++ +
Sbjct: 128 LLEPMTDHKELEERIRGCVDENAQV-MDTASTELLKIRQELRSSESKARERLEQMVRTPS 186
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ NN
Sbjct: 187 IQKM----LQDNLVTIRGDRYVIPVKQEYRGHF-GGMIHDQSASGATLFIEPEAVVQMNN 241
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E AE IL +L+A +A S + ++ + E+D FA+AG A+ M P+
Sbjct: 242 RVRELKLKEEAEVEKILRMLSALVADSADTLLVNVESLTELDFIFAKAGVAREMKATLPL 301
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L+ + + +HPL+ +
Sbjct: 302 LNDRGFIKLKRG------RHPLIPAEKV-------------------------------- 323
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+D+++ +++TGPNTGGKT S+KT+GL SLM+ AGL++PA+ +L FD
Sbjct: 324 ---VPLDVELGNRYSTIIVTGPNTGGKTVSLKTIGLLSLMAMAGLFVPAEEGSQLCVFDA 380
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SIL
Sbjct: 381 IFADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISIL 440
Query: 458 QYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
+++ R+G +V TTHY++L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 441 EHMH-RMGCRIVATTHYSELKAYAFDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFA 499
Query: 517 IAKSIGFDRKII-----------QRAQKLV------------ERLRPERQQHRKSELYQS 553
IA+ +G + II QR + ++ ER ER + L +
Sbjct: 500 IAERLGLAKTIIDHARGQVGEEDQRVESMIATLEENRLQAEAERESAERNRREVETLREQ 559
Query: 554 LMEERRKLESQ 564
L ERR+ E Q
Sbjct: 560 LAAERRRFEEQ 570
>gi|374296809|ref|YP_005047000.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
gi|359826303|gb|AEV69076.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
Length = 793
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 259/492 (52%), Gaps = 47/492 (9%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +L+P E+ + LRAV N+ K + +A + L+
Sbjct: 65 LGGIHDIRDSVRRAEIGSMLNPGELMRIANVLRAVRNL-KNYSNSANVKEGEDNIVGELI 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E L+ +E+KI CI + I D AS L IR + + ++ L ++
Sbjct: 124 ECLEAAK---RIEDKINLCIVSEEEI-SDNASPALGSIRRQIRHAQNSIKDKLNELIRSP 179
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ +P++T R R + +K ++ +P G+ + S+SGAT F+EP VE NN
Sbjct: 180 KYQKYMQEPIVTMRGERYVIPVKQEYRTEVP-GLIHDSSASGATLFIEPMAVVEANNAIR 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
L E AE IL L+ ++A+ E+ ++ + ++D FA+A + + VCP L++
Sbjct: 239 ELKIKEEAEIERILRELSCDVAEIAVELNTNINLLAKLDFIFAKAKLSLEYNCVCPKLNN 298
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
+ + +HPLL+ ++
Sbjct: 299 EGKIIIKKG------RHPLLVPKTV----------------------------------- 317
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
VPID + + +V+TGPNTGGKT ++KT+GL +LM++AGL++PA L F+ + A
Sbjct: 318 VPIDFWIGEDFHTLVVTGPNTGGKTVTLKTVGLFTLMAQAGLHIPAGEGTVLSVFNKVFA 377
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QS+EQ+LSTFS H+ IV+ILE + +LVL DE+G+GTDP+EG ALA +IL++L
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVNILENIDDRTLVLFDELGAGTDPTEGAALAMAILEHL 437
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+DR V TTHY+ L ENA EF +ETL+PTY++L G G SNA I+K
Sbjct: 438 KDRGCTVVATTHYSQLKVYAVTTPYVENACCEFDVETLKPTYKLLIGVPGRSNAFAISKR 497
Query: 521 IGFDRKIIQRAQ 532
+G +I+RA+
Sbjct: 498 LGLTDSVIERAK 509
>gi|401565428|ref|ZP_10806266.1| MutS2 family protein [Selenomonas sp. FOBRC6]
gi|400187177|gb|EJO21373.1| MutS2 family protein [Selenomonas sp. FOBRC6]
Length = 785
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 301/598 (50%), Gaps = 75/598 (12%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
++ IP G +E +L +T+ A+ + Q Q I D+ IL A +L E+ +
Sbjct: 32 RSVIPSG-DYDEVVRLHAETAEAVQIQQMQSPPFGGIYDLRVILKKATMSSVLELDELRS 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ T+ + NV D +Q S L ++ + L LE + ID +
Sbjct: 91 IMSTMGGMRNVKYFFR-------DLVQDVSLLKDMARPIEILGTLERHLRDTID-EHGNF 142
Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS +L I E + R + L ++L A Q + + ++T R R + +K
Sbjct: 143 RDDASPELRRITRELHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVK 198
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ P G+ + SSSGAT F+EP VE NN+ ++ + E IL L+ EIA+
Sbjct: 199 QEYRNYFP-GVIHDQSSSGATLFVEPLATVELNNIVRQMGLAREQEIQRILQKLSGEIAQ 257
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
S + + + EIDL FARAG A+ M+ P L+ D + ++ +HPLL
Sbjct: 258 SAAILAENCEILAEIDLIFARAGLAREMEAYPPTLNR------DGIVQLKRARHPLL--- 308
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
SK D VPIDI++ +++ITGPNTGG
Sbjct: 309 -----------------------------SK---DKVVPIDIELGKNFSILLITGPNTGG 336
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT SMKTLGL +L++++G +LP LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 337 KTVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIV 396
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ + L+L+DE+G+GTDP EG ALA SI+++ R + TTHYA L
Sbjct: 397 RIIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQ 456
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV-------E 536
T ENA+ EF L+TLRPTYR+L G G SNA +I++ +G ++I+ RA+ V E
Sbjct: 457 TGVENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVNEEHTHFE 516
Query: 537 RLRPERQQHRKS-ELYQSLMEERR--------KLESQARTAASLHAEIMDLYREDSTS 585
R+ E +Q +K E+ ++ ++ +L S+ T A+ E++ RE++ +
Sbjct: 517 RVVNELEQEKKDYEIRNRVLYDKEREITAVEARLRSERETLAASRQELLHKAREEANN 574
>gi|118444471|ref|YP_877846.1| recombination and DNA strand exchange inhibitor protein
[Clostridium novyi NT]
gi|229486371|sp|A0PZP4.1|MUTS2_CLONN RecName: Full=MutS2 protein
gi|118134927|gb|ABK61971.1| DNA mismatch repair MutS2 family protein [Clostridium novyi NT]
Length = 785
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 293/571 (51%), Gaps = 63/571 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
P+ + E + L+ A ++ S + DI ++ A L PSE+ V
Sbjct: 36 PYESAYEVREHLMETEEAFKISIKKGDAPFSGLYDIREAISKAQRRFTLFPSELLRVANL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
LRA + +K ++ +L ++Y L + + L LEE+I CI + I DRA
Sbjct: 96 LRA-SRRFKGYVKSDDLS----EKYEVLESITEGLVPLNGLEEEISKCIIGEEEI-SDRA 149
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L IR R++++ S +K + + + + + + T R R + +K HK
Sbjct: 150 STTLFNIR----RSLKDKTSSIKARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGA 205
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+P G+ + S+SGAT F+EP V+ NN L E AE IL+ L+ ++ ++ IK
Sbjct: 206 VP-GLVHDQSASGATLFIEPMSLVDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIK 264
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
D + E+D FA+A +AQ + + PI+S H NI KHPL+
Sbjct: 265 VDADILWELDFIFAKAKYAQKLGAIMPIISEDGH------FNIINAKHPLI--------- 309
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P K VEN+ L GI+ VVITGPNTGGKT ++K
Sbjct: 310 ------DP-KKVVENNIY----LRDGITS---------------VVITGPNTGGKTVTLK 343
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +M+ +GL + A + +F + ADIGD QS+EQ+LSTFS H++ IV+I++
Sbjct: 344 TVGLLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSA 403
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K ENA
Sbjct: 404 DENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENA 463
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRK 547
+ EF +ETLRPTYR+L G G SNA I+K +G II+ A++ + E L+ E
Sbjct: 464 SVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFE------ 517
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDL 578
+L QSL + K + AR A S E + L
Sbjct: 518 -DLIQSLQHKNIKAQEHARKAESAKEEAVKL 547
>gi|168334894|ref|ZP_02693015.1| MutS2 family protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 793
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 262/495 (52%), Gaps = 65/495 (13%)
Query: 47 IAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC 106
I G++ S G++L+ ++ R L+ ++ E + +SLQR+ L C
Sbjct: 80 IGGVIGS---GEILNIGKVLKTSRLLKKYSS-----EETTGITFNSLQRHFDSL-----C 126
Query: 107 NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG-- 164
+ ELE +I CI I D S++ + +R M L +K I Q+
Sbjct: 127 TY-KELEYEIERCI-----IAEDEFSDEATPTLSNIRRQMTRLTIKVKDTIQNIIQSSQY 180
Query: 165 --GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
+ + ++T R R C+ IKA+ K GI + S SGAT F+EP VE NN L
Sbjct: 181 KDXLQESIVTVRDGRQCIPIKAAQKTAF-KGIVHDTSGSGATVFIEPAAVVEMNNKIREL 239
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++E E IL+ + +I+ E+ ++E+D+ FA++ +A ++ P+L+ +
Sbjct: 240 MSAEQDEIQVILATFSEKISFITEELLLTFKSIIELDIIFAKSEYALKINARXPVLNEKG 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
+ IN++G +HPLL +++ VP
Sbjct: 300 Y------INLKGARHPLLNSTAV-----------------------------------VP 318
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
ID+ V E ++ITGPNTGGKT ++KT+GL ++M++ GL++PAK + L FD + A +
Sbjct: 319 IDVYVGKEFTTLLITGPNTGGKTVTLKTIGLFTIMAQCGLFIPAKENSELAIFDDVFAGL 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H+ +++IL ++ SL+L+DE+GSGTDP EG ALA SIL++LR
Sbjct: 379 GDEQSIEQSLSTFSAHMMNLIEILADMTTNSLILLDELGSGTDPVEGAALAMSILEHLRK 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY++L ENA EF ++ LRPTY++L G G SNA I+K +G
Sbjct: 439 QQITTVATTHYSELKLYALSTPNVENAGCEFDIQELRPTYKLLIGVPGKSNAFEISKKLG 498
Query: 523 FDRKIIQRAQKLVER 537
F +I A+ +++
Sbjct: 499 FPEHLIDDAKVFLQK 513
>gi|292670925|ref|ZP_06604351.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
gi|292647546|gb|EFF65518.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
Length = 785
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 263/516 (50%), Gaps = 60/516 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ AL + Q QP I D+ IL A+ G +L E+ +V T+ ++ N+
Sbjct: 45 RLHQETAEALQVQQIQPPPFGGIYDLRVILKKALMGSVLELDELRSVMSTMSSMRNMKYF 104
Query: 82 LTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ L + PLL+ + + L +E + ID + D AS +L I
Sbjct: 105 FRD--------LMQDVPLLKSMARPIEVLGIVERHLKDTID-EHGNFRDDASPELRRITC 155
Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
E + R + L ++L Q + + ++T R R + +K ++ P G+
Sbjct: 156 ELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NNM +L + E IL LTAEIAK+ + +
Sbjct: 211 DQSTSGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKNADILADNCKILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
EID FAR G A+ M+ PIL+ D + ++ +HPLL
Sbjct: 271 EIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--------------- 309
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D VPIDI++ +++ITGPNTGGKT SMKTLGL +L
Sbjct: 310 --------------------KDKVVPIDIELGSAFSILLITGPNTGGKTVSMKTLGLLAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
++++G +LPA LP + I ADIGD QS+EQ+LSTFS H IV I+E L+L
Sbjct: 350 LAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIEKAEPGDLIL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++ R + TTHYA L +NA+ EF L
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQPGIQNASVEFDLN 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
TLRPTYR+L G G SNA +I++ +G + I+QRA+
Sbjct: 470 TLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAE 505
>gi|238926801|ref|ZP_04658561.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
gi|238885333|gb|EEQ48971.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
Length = 785
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 268/523 (51%), Gaps = 68/523 (13%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT---LRAVNNV 78
+L +T A+ + Q QP I + IL A G LL E+ V+ T +R V
Sbjct: 45 QLHMETEEAVRVAQIQPPPFDGIHHLREILKKAGRGILLELDELRLVKSTIGGMRDVKYF 104
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
++ L+ AEL L EL + L LE + ID + D AS L I
Sbjct: 105 FRDLSADAEL----------LKELARRIEILGMLERNLKAAID-EYGNFRDDASPVLHRI 153
Query: 139 ----RAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
R + R + L S+L A Q +FQ + ++T R R + +K ++ P G
Sbjct: 154 TNELRTAQSRVKDRLSSVLHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-G 207
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S+SGAT F+EP VE NN ++ + E I+ LT EIA+S +
Sbjct: 208 VIHDQSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADILSANCT 267
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++DL FARA A+ M PIL+ D + + +HPLL
Sbjct: 268 ILSDLDLIFARASLAREMRAYPPILNR------DGYVYLRRARHPLL------------- 308
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
PL D VPIDI + ++ITGPNTGGKT SMKTLG+
Sbjct: 309 ---PL-------------------DKVVPIDIALGKTFSTLLITGPNTGGKTVSMKTLGI 346
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LMS++G +LPA++ +P + I ADIGD QS+EQ+LSTFS H IV I++ +
Sbjct: 347 LALMSQSGCFLPAESGSEIPVYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATSGD 406
Query: 434 LVLIDEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
LVL+DE+G+GTDP EG ALA SI++ +L +R+ V TTHYADL ENA+ E
Sbjct: 407 LVLLDEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
F L+TLRPTYR+L G G SNA +I++ +G +I+ RA++ V
Sbjct: 466 FDLKTLRPTYRLLIGIPGASNAFSISRQLGLSEEIVARAEEYV 508
>gi|422343730|ref|ZP_16424657.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
gi|355378146|gb|EHG25337.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
Length = 785
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 263/516 (50%), Gaps = 60/516 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ AL + Q QP I D+ IL A+ G +L E+ +V T+ ++ N+
Sbjct: 45 RLHQETAEALQVQQIQPPPFGGIYDLRVILKKALMGSVLELDELRSVMSTMSSMRNMKYF 104
Query: 82 LTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ L + PLL+ + + L +E + ID + D AS +L I
Sbjct: 105 FRD--------LMQDVPLLKSMARPIEVLGIVERHLKDTID-EHGNFRDDASPELRRITC 155
Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
E + R + L ++L Q + + ++T R R + +K ++ P G+
Sbjct: 156 ELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NNM +L + E IL LTAEIAK+ + +
Sbjct: 211 DQSASGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKNADILADNCKILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
EID FAR G A+ M+ PIL+ D + ++ +HPLL
Sbjct: 271 EIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--------------- 309
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D VPIDI++ +++ITGPNTGGKT SMKTLGL +L
Sbjct: 310 --------------------KDKVVPIDIELGSAFSILLITGPNTGGKTVSMKTLGLLAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
++++G +LPA LP + I ADIGD QS+EQ+LSTFS H IV I+E L+L
Sbjct: 350 LAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIEKAEPGDLIL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++ R + TTHYA L +NA+ EF L
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQPGIQNASVEFDLN 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
TLRPTYR+L G G SNA +I++ +G + I+QRA+
Sbjct: 470 TLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAE 505
>gi|375084730|ref|ZP_09731589.1| MutS2 family protein [Megamonas funiformis YIT 11815]
gi|374567865|gb|EHR39064.1| MutS2 family protein [Megamonas funiformis YIT 11815]
Length = 789
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 270/517 (52%), Gaps = 58/517 (11%)
Query: 24 LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
L+ T A ++ S I DI +L G ++ + + + T+ A+ N+ KK
Sbjct: 47 LSHTQEASNILISSEPPFGGIHDIRSLLKKTSLGLVIEINSLLDILNTMYAMRNL-KKFF 105
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-- 141
+ E+D + ++ +E+L +LE +I +D + + D AS +L IR E
Sbjct: 106 KELEIDSPQFKEWAKSIEIL------GQLEREIDNIVD-EHGSMRDSASVELMRIRREIK 158
Query: 142 --RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
++R NLD +LK Q + I +T R R + IK ++ P G+ + S
Sbjct: 159 SSQRRIKTNLDGILKNPDYQKYFQDNI----VTIRDERYVIPIKQEYRQQFP-GVVHDQS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG+T F+EP V+ NN +L E E IL +++ +IA++ + + + + ++D
Sbjct: 214 SSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQLD 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
AFA+A A+ M P ++ + +N+ +HPLL
Sbjct: 274 FAFAKAKLARKMHATMP------EINDEGIVNLAKARHPLL------------------- 308
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
D VPIDI++ R ++ITGPNTGGKT SMKTLGL LM++
Sbjct: 309 ----------------NKDNVVPIDIRLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQ 352
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL++P ++ ++ F + ADIGD QS+EQ+LSTFS H+ IV+IL + + L+L+DE
Sbjct: 353 SGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDE 412
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+GSGTDP EG ALA SIL+ L D V TTHY +L ENA EF +++LR
Sbjct: 413 VGSGTDPEEGAALAMSILERLMDIGACTVATTHYNELKTFAYSKEGIENACVEFDIKSLR 472
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
PTYR+L G+ G SNA I+K +G +I RAQ+L++
Sbjct: 473 PTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLIK 509
>gi|256003347|ref|ZP_05428338.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|385778551|ref|YP_005687716.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|419723621|ref|ZP_14250736.1| MutS2 protein [Clostridium thermocellum AD2]
gi|419724554|ref|ZP_14251616.1| MutS2 protein [Clostridium thermocellum YS]
gi|255992637|gb|EEU02728.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|316940231|gb|ADU74265.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|380772101|gb|EIC05959.1| MutS2 protein [Clostridium thermocellum YS]
gi|380780303|gb|EIC09986.1| MutS2 protein [Clostridium thermocellum AD2]
Length = 793
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 289/582 (49%), Gaps = 73/582 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E +QK + A +A + P+ I DI L G +L+P E+ LRAV
Sbjct: 43 VERAQKETSDAVAFIARRGTPPM--GGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ K + D S L+ L++ +E++I I + I D AS L
Sbjct: 101 NL-KSYASNDRIKTDEDNIVSELIGCLESNK---RIEDRIYMSILSEDEI-ADNASPTLA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + + E++ L + I +P++T R R + +K ++ +P G+
Sbjct: 156 NIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIP-GLIH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN L E AE IL LT EI +K + +
Sbjct: 215 DSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D FA+A + + VCP+L+ + I I+ +HPLL
Sbjct: 275 RLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ TV VPID + + +V+TGPNTGGKT ++KT+GL +L
Sbjct: 313 --------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA ++ F + ADIGD QS+EQ+LSTFS H+ IV IL+ V +SLVL
Sbjct: 354 MTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL+YLR++ V TTHY+ L ENA EF++E
Sbjct: 414 FDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENACCEFNVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--------------------- 535
TLRPTYR+L G G SNA I+K +G II++A++ +
Sbjct: 474 TLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQS 533
Query: 536 --ERLRPERQQHRKSELYQSLMEERRKL-ESQARTAASLHAE 574
E+++ E + +L + L E++RKL E++ R AE
Sbjct: 534 ENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAE 575
>gi|125973529|ref|YP_001037439.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281417732|ref|ZP_06248752.1| MutS2 family protein [Clostridium thermocellum JW20]
gi|229486373|sp|A3DE67.1|MUTS2_CLOTH RecName: Full=MutS2 protein
gi|125713754|gb|ABN52246.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281409134|gb|EFB39392.1| MutS2 family protein [Clostridium thermocellum JW20]
Length = 793
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 289/582 (49%), Gaps = 73/582 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E +QK + A +A + P+ I DI L G +L+P E+ LRAV
Sbjct: 43 VERAQKETSDAVAFIARRGTPPM--GGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ K + D S L+ L++ +E++I I + I D AS L
Sbjct: 101 NL-KSYASNDRIKTDEDNIVSELIGCLESNK---RIEDRIYMSILSEDEIA-DNASPTLA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + + E++ L + I +P++T R R + +K ++ +P G+
Sbjct: 156 NIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIP-GLIH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN L E AE IL LT EI +K + +
Sbjct: 215 DSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D FA+A + + VCP+L+ + I I+ +HPLL
Sbjct: 275 RLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ TV VPID + + +V+TGPNTGGKT ++KT+GL +L
Sbjct: 313 --------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA ++ F + ADIGD QS+EQ+LSTFS H+ IV IL+ V +SLVL
Sbjct: 354 MTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL+YLR++ V TTHY+ L ENA EF++E
Sbjct: 414 FDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENACCEFNVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--------------------- 535
TLRPTYR+L G G SNA I+K +G II++A++ +
Sbjct: 474 TLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQS 533
Query: 536 --ERLRPERQQHRKSELYQSLMEERRKL-ESQARTAASLHAE 574
E+++ E + +L + L E++RKL E++ R AE
Sbjct: 534 ENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAE 575
>gi|312127327|ref|YP_003992201.1| muts2 family protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777346|gb|ADQ06832.1| MutS2 family protein [Caldicellulosiruptor hydrothermalis 108]
Length = 787
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 286/547 (52%), Gaps = 81/547 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK- 104
DI+ IL A + +L+P I AV R L+ V L A DG L+ L LK
Sbjct: 70 DISLILKKARAQAILTPHGILAVGRILKLSQEVRSYLANA---DGSYLKSSREKLFYLKE 126
Query: 105 -----NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLK 154
+ FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 127 LTARIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLETRIRDELNRMIR 172
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE
Sbjct: 173 DHKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227
Query: 215 FNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N ++R++ SE EE IL L+ I+++ EIK + + E+D+ F +A +A
Sbjct: 228 ISN-QIRVARSEEKEEIERILQELSQLISRNYNEIKQNFESLSELDILFTKAQWAHQFRA 286
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PIL++ + IN++ +HPL+ +
Sbjct: 287 SKPILNTAGY------INLKKARHPLIEKERV---------------------------- 312
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA +
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVC 365
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL++L + V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SN
Sbjct: 426 KAILKFLYRKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL I+ ++G +I++ A+ + + E +++ + +R++LE +A L
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEEALESANKLKI 540
Query: 574 EIMDLYR 580
E +L R
Sbjct: 541 EAENLKR 547
>gi|153810971|ref|ZP_01963639.1| hypothetical protein RUMOBE_01362 [Ruminococcus obeum ATCC 29174]
gi|149832859|gb|EDM87942.1| MutS2 family protein [Ruminococcus obeum ATCC 29174]
Length = 793
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 277/561 (49%), Gaps = 63/561 (11%)
Query: 26 QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK-KLT 83
QT AL + Q + ++DI G L G LS EI AV L + V
Sbjct: 49 QTKDALTRLFQKGSISFGNVKDIRGSLKRLEIGSALSIQEILAVCGLLENTSRVKTYSRK 108
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
E +L GDSL + + LT L +I CI + I D AS L IR
Sbjct: 109 ERNDLPGDSLD------SMFDGLSPLTPLSTEIRRCILSEEEIS-DDASPALRQIR---- 157
Query: 144 RNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
RNM+ + + A + + +IT R R C+ +KA +K +P G+ + SS
Sbjct: 158 RNMKITNDRIHTQLAGLVNGSARTYLQDSVITMRNGRYCIPVKAEYKGQVP-GMIHDQSS 216
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
+G+T F+EP V+ NN L E E IL+ L+ +IA + I ++ ++++D
Sbjct: 217 TGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILADLSQQIATEQEAISLNLELMVQLDF 276
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
FARA A M+ P+ + + IN++ +HPL+ +
Sbjct: 277 IFARATLAMEMNASEPVFNDEGR------INLKKARHPLINKKKV--------------- 315
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
VPIDI++ E ++VITGPNTGGKT S+KT+GL +LM ++
Sbjct: 316 --------------------VPIDIRLGDEFDLLVITGPNTGGKTVSLKTVGLLTLMGQS 355
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GL++P + L F + ADIGD QS+EQ+LSTFS H++ IV L R SLVL DE+
Sbjct: 356 GLHIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFLGKADRHSLVLFDEL 415
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
SGTDP+EG ALA SIL YL +R + TTHY++L + ENA EF++ETL P
Sbjct: 416 CSGTDPTEGAALAISILSYLHERGIRTMATTHYSELKVFALSASGIENACCEFNVETLSP 475
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA I+ +G II++A++ + Q ++ SL E R
Sbjct: 476 TYRLLIGIPGKSNAFAISSKLGIPESIIEKAREQI-----NEQDESFEDVLTSLEESRIT 530
Query: 561 LESQARTAASLHAEIMDLYRE 581
+E++ A EI L ++
Sbjct: 531 IENERTEIAQYKLEIETLKKQ 551
>gi|300856601|ref|YP_003781585.1| DNA mismatch repair MutS-like protein [Clostridium ljungdahlii DSM
13528]
gi|300436716|gb|ADK16483.1| DNA mismatch repair MutS related protein [Clostridium ljungdahlii
DSM 13528]
Length = 786
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 304/579 (52%), Gaps = 71/579 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E ++ L +T AL ++ ++ P + + D+ + A G L P +I + L
Sbjct: 39 NLYEVREHLQETREALKLLVTKGNPPFE--GVYDVRQGIKMAGKGSTLMPGQILKIGAIL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
RA + K +T + + + + + ++ L LE++I I+ + I D+AS
Sbjct: 97 RAARRIQKYITVS-----EDEEHFKIIEDICAGIVPLKNLEDEIFIAIESEDEI-SDKAS 150
Query: 133 EDLELIRAERK-RNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K +N + ++SL++ + + L T R R + +KA +K
Sbjct: 151 SLLYNIRKSLKDKNASVRDRVNSLIRSYSDYL------QDNLYTMRGDRYVLPVKAENKS 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SSSGAT ++EP G V NN L E AE IL+ L+ +I + +
Sbjct: 205 SVP-GLVHDQSSSGATLYIEPMGLVNLNNEIKELKLKEKAEIDRILAELSQQIYDNITVV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ D + E+D FA+A F ++G P +VS + +NI +HPL+
Sbjct: 264 ERDADIIWELDFIFAKAKFGNELNGNIP------NVSENGVVNIIEGRHPLI-------- 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ TV VP+D+ + +VITGPNTGGKT ++
Sbjct: 310 ----------------NKKTV-----------VPMDVYIGRNFSCLVITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +M+ +GL +PA+ + + +F + ADIGD QS+EQNLSTFS H++ IV+I+E
Sbjct: 343 KTIGLLHIMALSGLMIPARENSTVGFFTEVFADIGDEQSIEQNLSTFSSHMTNIVNIIEN 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K+ EN
Sbjct: 403 FDEKSLVLFDELGAGTDPTEGAALAVSILENLRKRGCTIVATTHYSELKVYALKNEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR++ G G SNA I+K +G II+ A+ E + + Q
Sbjct: 463 ASVEFDVETLRPTYRLMIGVPGKSNAFEISKRLGLPEFIIEDAR---ENIASDALQF--E 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAE---IMDLYREDST 584
+L QSL E++ K E+ AR A L +E I + Y E ++
Sbjct: 518 DLIQSLQEKKSKAETFAREAEILKSEAAKIKEKYEEKAS 556
>gi|429736042|ref|ZP_19269961.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156327|gb|EKX98960.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
Length = 785
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 294/586 (50%), Gaps = 78/586 (13%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A+ + Q Q I D+ IL A +L E+ ++ T+ + NV
Sbjct: 45 RLHAETAEAVQIQQMQSPPFGGIYDLRAILKKATMSSVLELDELRSIMSTMGGMRNVKYF 104
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
D +Q S L ++ + L LE + ID + D AS +L I E
Sbjct: 105 FR-------DLVQDVSLLKDMARPIEILGTLERHLKDTID-EHGNFRDDASPELRRITRE 156
Query: 142 ----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ R + L ++L A Q + + ++T R R + +K ++ P G+ +
Sbjct: 157 LHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIHD 211
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
SSSGAT F+EP VE NN ++ + E IL L+ EIA+S + + + E
Sbjct: 212 QSSSGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSGEIAQSAAILAENCEILAE 271
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
IDL FARAG A+ M+ P L+ D + ++ +HPLL
Sbjct: 272 IDLIFARAGLAREMEAYQPTLNR------DGVVRLKRARHPLL----------------- 308
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
SK D VPIDI++ +++ITGPNTGGKT SMKTLGL +L+
Sbjct: 309 ---------------SK---DKVVPIDIELGKNFSILLITGPNTGGKTVSMKTLGLLALL 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+++G +LP LP + I ADIGD QS+EQ+LSTFS H IV I++ + L+L+
Sbjct: 351 AQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAQQGDLILL 410
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP EG ALA SI+++ R + TTHYA L T ENA+ EF L+T
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQTGVENASVEFDLKT 470
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV-------ERLRPERQQHRKSEL 550
LRPTYR+L G G SNA +I++ +G ++I+ RA+ V ER+ E +Q +K
Sbjct: 471 LRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVNEEHTHFERVVNELEQEKKD-- 528
Query: 551 YQS----LMEERR-------KLESQARTAASLHAEIMDLYREDSTS 585
Y++ L ++ R +L S+ T A+ E++ RE++ +
Sbjct: 529 YEARNRVLYDKEREITAVEARLRSERETLAASRQELLHKAREEANN 574
>gi|302871595|ref|YP_003840231.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574454|gb|ADL42245.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
Length = 786
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 289/541 (53%), Gaps = 81/541 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL----QRYSPLLE 101
DI+ +L A + +L+P EI AV R L+ V L A DG+ L +R L E
Sbjct: 70 DISLVLKKAKAQAILTPHEILAVNRILKLSQEVRSYLANA---DGNYLKSSRERLFNLKE 126
Query: 102 LLKNCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLK 154
L + FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 127 LTARIDQTFLTPEE-------------ILDTASPRLKDIR-DRIRRLEAKIRDELNRMIR 172
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE
Sbjct: 173 DPKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227
Query: 215 FNNMEVRLSNSEIAEETAILSL-LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N ++R++ SE EE L L+ I+ S EIK + + E+D+ F +A +A
Sbjct: 228 ISN-QIRVARSEEKEEIEKLLQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRA 286
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PIL++ + IN++ +HPL+ +
Sbjct: 287 SKPILNTAGY------INLKKARHPLIKKEKV---------------------------- 312
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G+++PA + +
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGVFIPADDRSEVC 365
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL++L ++ V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SN
Sbjct: 426 KAILKFLHNKGAKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL I+ ++G +++II+ A+ + + E +++ + +RR+LE +A L +
Sbjct: 486 ALYISSNLGLNKEIIELAKGYMSKKTLEL-----TDIINEMERKRRELEEALESANKLKS 540
Query: 574 E 574
E
Sbjct: 541 E 541
>gi|291533994|emb|CBL07107.1| Mismatch repair ATPase (MutS family) [Megamonas hypermegale
ART12/1]
Length = 611
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 281/540 (52%), Gaps = 60/540 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG + +K +P E + L + A+ ++ S+P I DI +L G ++
Sbjct: 26 MGKELAEKL-LPSSDIDEVIENLSHTQEASNILISSEP-PFGGIHDIRSLLKKTSLGLVI 83
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ + + T+ A+ N+ KK + E+D + ++ +E+L +LE +I +
Sbjct: 84 EINSLLDILNTMYAMRNL-KKFFKELEIDSPQFKEWAKSIEIL------GQLEREIDNIV 136
Query: 121 DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
D + + D AS +L IR E ++R NLD +LK Q + I +T R
Sbjct: 137 D-EHGSMRDSASVELMRIRREIKSSQRRIKTNLDGILKNPDYQKYFQDNI----VTIRDE 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + IK ++ P G+ + SSSG+T F+EP V+ NN +L E E IL +
Sbjct: 192 RYVIPIKQEYRQQFP-GVVHDQSSSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKV 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
++ +IA++ + + + + ++D AFA+A A+ M P ++ + +N+ +
Sbjct: 251 ISEKIARNADSLLHNCEIMAQLDFAFAKAKLARKMHATMP------EINDEGIVNLAKAR 304
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL D VPIDI++ R ++I
Sbjct: 305 HPLL-----------------------------------NKDNVVPIDIRLGEGYRTLLI 329
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT SMKTLGL LM+++GL++P ++ ++ F + ADIGD QS+EQ+LSTFS
Sbjct: 330 TGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFS 389
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H+ IV+IL + + L+L+DE+GSGTDP EG ALA SIL+ L + V TTHY +L
Sbjct: 390 AHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSILERLMEIGACTVATTHYNEL 449
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA EF +++LRPTYR+L G+ G SNA I+K +G +I RAQ+L++
Sbjct: 450 KTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLIK 509
>gi|51892253|ref|YP_074944.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81692142|sp|Q67QE3.1|MUTS2_SYMTH RecName: Full=MutS2 protein
gi|51855942|dbj|BAD40100.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 793
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 185/568 (32%), Positives = 281/568 (49%), Gaps = 67/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E Q +TS A + + + L + D+ + AV G +L P ++ V T +
Sbjct: 42 EVQHRQAETSEARRLYEGGHAIPLGGLHDLRAHVQRAVRGGVLDPGDLLDVADTAASSRR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ + L E Q P+L L + LE +I +D + D + E
Sbjct: 102 LKRFLEE---------QEGLPILTALSRMLGTFHHLEAEIRQAVDEHGEVRDDASPALAE 152
Query: 137 LIRAER---KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
+ R+ R R E LD+ ++ AA+ Q P++T R R V +K ++ +P G
Sbjct: 153 IRRSMRILQNRMKERLDAFVRGSAAKYLQ-----DPIVTIREGRFVVPVKIEYRAQVP-G 206
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG+T F+EP VE NN L+ E E IL+ L++ +A + +
Sbjct: 207 IVHDQSASGSTLFIEPMAIVEMNNDLRELALKEHEEVERILARLSSLVAGEADALLDTLQ 266
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +ID A A+ + +D P L + + I +HPLL G
Sbjct: 267 AVAQIDFASAKGKLSLDLDCTEPELVREP------ILEIHKGRHPLLKGRV--------- 311
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPID+ + +VITGPNTGGKT ++KT+GL
Sbjct: 312 ---------------------------VPIDVHIGITFDTLVITGPNTGGKTVALKTMGL 344
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM++AGL+LPA + R+ F + DIGD QS+EQ+LSTFSGH++ I+ IL+ + +
Sbjct: 345 FVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMTNIIRILDALEGPA 404
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+G+GTDP+EG ALA SIL++L R V TTHY++L +R ENA+ EF
Sbjct: 405 LVLLDELGAGTDPTEGAALAMSILEHLHKRGAKTVATTHYSELKTYAYTRSRVENASVEF 464
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ETLRPT+R+L G G SNA I++ +G I+ RA++ + ++Q R +L Q
Sbjct: 465 DVETLRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQFL-----TQEQERVEDLIQG 519
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
+ R +LE + A L AE + E
Sbjct: 520 IHATRAELEKERAEAHRLRAEAQRMREE 547
>gi|323490483|ref|ZP_08095690.1| MutS2 protein [Planococcus donghaensis MPA1U2]
gi|323395887|gb|EGA88726.1| MutS2 protein [Planococcus donghaensis MPA1U2]
Length = 786
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 302/620 (48%), Gaps = 84/620 (13%)
Query: 17 LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E +LL Q +++ + + I DI A G LSP E+ V T+RA
Sbjct: 41 INEVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLQARRAQIGGSLSPMELMEVSSTVRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + ++ E + +G + + LE ++ LT LE I CID + LD AS +L
Sbjct: 100 SRILRQFFETIQEEG--VVQIPHFLEKKESMPILTALEHAINVCIDDNGGV-LDSASTEL 156
Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
IR + R E L+SL++ K A+++ + ++T R R + +K ++
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRSHY 211
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP V+ NN RL E E IL +L+A++ + E+
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDSVVQANNEVRRLKMKEKEEIDRILMMLSAQVQEVAHELFV 270
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+D + EIDL A+A + G P ++++ + IN++ +HP++
Sbjct: 271 LVDVLGEIDLILAKAKYGSAHKGTKPTMNTEGY------INLKKARHPMI---------- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P K +V VP DI+ + +VITGPNTGGKT ++KT
Sbjct: 315 ------P-KEEV------------------VPNDIEFGRDITAIVITGPNTGGKTVTLKT 349
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GLA+LM+++GL +PA + L FD I ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 350 VGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLV+ DE+G+GTDP EG ALA S+L + R + TTHY +L NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGFNRPGVANAS 469
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VE 536
EF +ETL PTYR+L G G SNA I+K +G II A+ +E
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHAKSFTGTDSKAVDSMIASLE 529
Query: 537 RLRPERQQ-------------HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDS 583
+ R E +Q K EL Q L E +K E + A +I+D R ++
Sbjct: 530 KSRREAEQDAERTQEVLSESEQLKKELAQQLEEYEQKKEQREEKAKEKARKIVDEARAEA 589
Query: 584 TSASISVYRYQFAVTSTLSK 603
S + + Q S++ +
Sbjct: 590 ESVISELRKMQLNQGSSVKE 609
>gi|452995728|emb|CCQ92597.1| MutS2 protein [Clostridium ultunense Esp]
Length = 792
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 192/561 (34%), Positives = 289/561 (51%), Gaps = 52/561 (9%)
Query: 16 SLEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLEE + L +T AL + M++ L I DI+ L A G L+P+ + V +LR
Sbjct: 39 SLEEVEYLQRETKEALELIMKNGNPPLFGIFDISHELKMAEIGGTLNPNNLLKVSDSLRV 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
++ K + E E + ++ L L+ + L +E++I I I D AS
Sbjct: 99 SRSLKKYMKELKE---EETIKFPILQGLISSLRALKFIEDEINNAI-INENEISDNASPT 154
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + E++ + L + + + ++T R R V IK +K P G+
Sbjct: 155 LRNIRRQIINKNESIRNRLNSIISSPKYKKFLQDSIVTMREGRYVVPIKQENKAYFP-GL 213
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP VE NN L E E IL L+A +A+ + I+ +
Sbjct: 214 VHDQSSSGATLFVEPMAVVELNNELRELEIKEREEIERILKELSALVAEEAKNIRNNQNI 273
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FA+ A MDG P+L+ + I+I+ +HPLL
Sbjct: 274 LQRLDFIFAKGKLALEMDGTKPLLNKSGY------IDIKQARHPLL-------------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
E E+ VPIDI + +VITGPNTGGKT ++KT+GL
Sbjct: 314 --------EPKEV-------------VPIDIYLGKGFNTLVITGPNTGGKTVTLKTVGLL 352
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++G+++PA + ++ FD I ADIGD QS+EQ+LSTFS H++ IVDIL+ V + SL
Sbjct: 353 TLMAQSGIHIPADFNSQIGVFDQIFADIGDEQSIEQSLSTFSSHMTNIVDILDKVEQNSL 412
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L DE+G+GTDP+EG ALA SIL +L + TTHY+ L R NA+ EF
Sbjct: 413 ILFDELGAGTDPTEGAALAMSILDHLLKLNIRTIATTHYSQLKIYALTTDRVRNASVEFD 472
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR+L G G SNA I+K +G II A+ LV + E + ++ Q++
Sbjct: 473 VETLSPTYRLLIGVPGKSNAFEISKRLGLQGYIIDYAKTLVSKENVEFE-----DVLQAI 527
Query: 555 MEERRKLESQARTAASLHAEI 575
++R+ +E A L +++
Sbjct: 528 DKDRKIIEENRFEAERLKSDV 548
>gi|383761505|ref|YP_005440487.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381773|dbj|BAL98589.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 811
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 289/564 (51%), Gaps = 68/564 (12%)
Query: 21 QKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q+ L QT A ++ Q + + D+ +L+ A G +L P ++ ++ TL+ +
Sbjct: 44 QEWLAQTREAYQLLGQKDDISFGGVSDLRPLLDRAERGAILLPPDLLEIKFTLQRARQLR 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
LT + L E+ + L E+I CI+ + ++D AS +L IR
Sbjct: 104 TLLTRIE-------SSFPHLAEMAADIEPCDHLVEQISHCINDRG-DVMDSASPELARIR 155
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+E + E L S L ++ + + L+T+R+ R + I+A +K + +GI + S
Sbjct: 156 SELRIAQERLLSTLDRIIHSADIRPYLQEALVTQRQGRYVIPIRAEYKGNI-EGIIHDQS 214
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT F+EP V+ NN L E E IL L+ +A+ ++ + + +D
Sbjct: 215 ASGATLFIEPLKVVQQNNAVRELELQEEKEVRRILLELSTAVAEEAVYLRRNVQALARLD 274
Query: 260 LAFARAGFAQWMDGVCPIL--------------SSQSHVSFDSSINIEGIKHPLLLGSSL 305
FA+A +A +D P + + ++ S I++ +HPLL
Sbjct: 275 FTFAKARYAYALDATVPEMLPFQPRRSKQKRDETEEAAAHPGSIIDLRRARHPLL----- 329
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+P TV VPID+ ++ +T ++VITGPNTGGKT
Sbjct: 330 ----------DP---------QTV-----------VPIDVYLDDDTYIIVITGPNTGGKT 359
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+++GL +PA RL F+ I ADIGD QS+EQNLSTFS H++ I+ I
Sbjct: 360 VTLKTVGLLTLMAQSGLMIPADVGSRLSVFEGIYADIGDEQSIEQNLSTFSSHMTNIIAI 419
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE SLVL+DE+G+GTDP EG ALA ++L+ LRDR TTHY+DL
Sbjct: 420 LEEADPHSLVLLDELGAGTDPEEGSALAIALLENLRDRGITTFATTHYSDLKLYAHNTPG 479
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
NA+ EF +ETL PTY + G G SNAL IA+ +G + I+++A+ +V RP+ Q
Sbjct: 480 VRNASVEFDVETLSPTYELSIGLPGRSNALTIARRLGLNPVIVEKAESIV---RPDTLQA 536
Query: 546 RKSELYQSLMEERRKLESQARTAA 569
K L+++ R+ +A AA
Sbjct: 537 DK------LLDDIRRARQEALEAA 554
>gi|310640954|ref|YP_003945712.1| muts2 protein [Paenibacillus polymyxa SC2]
gi|309245904|gb|ADO55471.1| MutS2 protein [Paenibacillus polymyxa SC2]
Length = 733
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 291/580 (50%), Gaps = 88/580 (15%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE +KLL T A A + + L + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVLSFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQAA 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRAS 132
+ +T SL +P+ LL L+E LE I CID + LD AS
Sbjct: 100 RRIQVYVT--------SLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
+L IR E + R E LDS+++ +++ Q LIT R R + +KA ++
Sbjct: 151 TELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYR 205
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 206 SYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADM 264
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 265 LLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------- 311
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL+ VPID+++ +++TGPNTGGKT +
Sbjct: 312 ---------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTVT 343
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+
Sbjct: 344 LKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILK 403
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 404 NMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGII 463
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLVE 536
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ QR + ++
Sbjct: 464 NASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEVTEEDQRVEHMIA 523
Query: 537 RLRPER----QQHRKSELYQSLMEERR--------KLESQ 564
L R Q+ K+E + ME R KLESQ
Sbjct: 524 SLEQNRLTAEQEREKAEQLRKEMEALRTRHQTELDKLESQ 563
>gi|337751036|ref|YP_004645198.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
gi|336302225|gb|AEI45328.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
Length = 794
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 289/543 (53%), Gaps = 69/543 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI L+ A G +L+P+E+ + T + + + L +S+ P+ L+
Sbjct: 74 IRDIRPALHRARIGGMLNPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 125
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
++ +T+ LE++I CID ++ D AS +L IR+E + + E L+ +++
Sbjct: 126 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 184
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ N
Sbjct: 185 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 239
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P
Sbjct: 240 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 299
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + + +HPL+ AS N
Sbjct: 300 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 322
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD
Sbjct: 323 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 378
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 379 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 438
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L Y+ R+G +V TTHY +L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 439 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 497
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II+ A+ V ++ R + +L + + E++ TA L E+
Sbjct: 498 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREV 552
Query: 576 MDL 578
L
Sbjct: 553 ETL 555
>gi|379724074|ref|YP_005316205.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
gi|378572746|gb|AFC33056.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
Length = 794
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 289/543 (53%), Gaps = 69/543 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI L+ A G +L+P+E+ + T + + + L +S+ P+ L+
Sbjct: 74 IRDIRPALHRARIGGMLNPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 125
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
++ +T+ LE++I CID ++ D AS +L IR+E + + E L+ +++
Sbjct: 126 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 184
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ N
Sbjct: 185 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 239
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P
Sbjct: 240 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 299
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + + +HPL+ AS N
Sbjct: 300 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 322
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD
Sbjct: 323 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 378
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 379 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 438
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L Y+ R+G +V TTHY +L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 439 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 497
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II+ A+ V ++ R + +L + + E++ TA L E+
Sbjct: 498 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREV 552
Query: 576 MDL 578
L
Sbjct: 553 ETL 555
>gi|386040047|ref|YP_005959001.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
gi|343096085|emb|CCC84294.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
Length = 789
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 291/581 (50%), Gaps = 90/581 (15%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +KLL T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ +T SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVYVT--------SLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLV 535
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ QR + ++
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEVTEEDQRVEHMI 522
Query: 536 ERLRPER----QQHRKSELYQSLMEERR--------KLESQ 564
L R Q+ K+E + ME R KLESQ
Sbjct: 523 ASLEQNRLTAEQEREKAEQLRKEMEALRTRHQTELDKLESQ 563
>gi|386726811|ref|YP_006193137.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
gi|384093936|gb|AFH65372.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
Length = 775
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 289/543 (53%), Gaps = 69/543 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI L+ A G +L+P+E+ + T + + + L +S+ P+ L+
Sbjct: 55 IRDIRPALHRARIGGMLTPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 106
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
++ +T+ LE++I CID ++ D AS +L IR+E + + E L+ +++
Sbjct: 107 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 165
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ N
Sbjct: 166 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 220
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P
Sbjct: 221 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 280
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + + +HPL+ AS N
Sbjct: 281 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 303
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD
Sbjct: 304 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 359
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 360 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 419
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L Y+ R+G +V TTHY +L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 420 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 478
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II+ A+ V ++ R + +L + + E++ TA L E+
Sbjct: 479 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERVTAQELRREV 533
Query: 576 MDL 578
L
Sbjct: 534 ETL 536
>gi|424834848|ref|ZP_18259539.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
gi|365978409|gb|EHN14489.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
Length = 788
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 292/563 (51%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLVTKGAPPFE--GVYDIRSGISLAEKGSTLLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L ++ + L ++EE+I I+ + I DRA+
Sbjct: 97 RCARRFKEYINHKEEE-----ENYRALEDICEGIFSLPKIEEEIFNAIEGEDEIA-DRAT 150
Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +++N + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE ILS+L+++I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSSKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL+ +
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPLIDRRQV--- 314
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 315 --------------------------------VPISVKLGDEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IVDI++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVDIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL Q+L E+ K + AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540
>gi|374322955|ref|YP_005076084.1| MutS2 protein [Paenibacillus terrae HPL-003]
gi|357201964|gb|AET59861.1| MutS2 protein [Paenibacillus terrae HPL-003]
Length = 789
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 291/581 (50%), Gaps = 90/581 (15%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +KLL T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDIIPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
V + SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRVQVYVA--------SLHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDVLGTLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHALGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLV 535
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ QR + ++
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEVTEEDQRVEHMI 522
Query: 536 ERLRPER----QQHRKSELYQSLMEERR--------KLESQ 564
L R Q+ K+E + MEE R KLE+Q
Sbjct: 523 ASLEQNRLTAEQEREKAEQLRGEMEELRTRHQNELEKLEAQ 563
>gi|308068160|ref|YP_003869765.1| MutS2 protein [Paenibacillus polymyxa E681]
gi|305857439|gb|ADM69227.1| MutS2 protein [Paenibacillus polymyxa E681]
Length = 789
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 291/581 (50%), Gaps = 90/581 (15%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +K+L T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKMLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ +T SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVYVT--------SLHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHAMGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLV 535
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ QR + ++
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEVTEEDQRVEHMI 522
Query: 536 ERLRPER----QQHRKSELYQSLMEERR--------KLESQ 564
L R Q+ K+E + ME R KLESQ
Sbjct: 523 ASLEQNRLTAEQEREKAEQLRKEMEALRSRHQTELDKLESQ 563
>gi|302802119|ref|XP_002982815.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
gi|300149405|gb|EFJ16060.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
Length = 691
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 255/515 (49%), Gaps = 40/515 (7%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+ D AS +L R E+ L L+ ++ I + G + R+CV + +
Sbjct: 182 VKDSASPELRTARMEQASCERKLQELMTRIV--IDRLAGDPNGQVASLDGRLCVAVSTEN 239
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+P G+ L S+ G ++EP AV NN + E +L LT ++
Sbjct: 240 NSKVP-GLLLQSSAGGLVSYVEPSAAVALNNSLSQARADAAQAEYRVLDDLTTKLRPFLS 298
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN-----IEGIKHPLLL 301
+ +D V + D+ AR ++ + P +S+++ +EG +HPLLL
Sbjct: 299 NFSFTLDIVADFDVVLARGRYSSSIGATRPSFVHAERDESESTLDEFLVLLEGARHPLLL 358
Query: 302 GSSLRSLSAASSNSNP-------LKSDVENSEMTVGSLSKGIS-----------DFPVPI 343
+L A + N +KS S + + I+ PVPI
Sbjct: 359 EQHRGNLRDAKAKLNTKRKILNRMKSRAFTSAQDYQAAEEAITKAEEEVAELEASVPVPI 418
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
D ++ ET+VV ITGPNTGGKTA++KTLGLA LM++AGLY+ AK +PW D +LADIG
Sbjct: 419 DFLIKRETKVVTITGPNTGGKTAAIKTLGLAVLMARAGLYVLAKEPALIPWVDRVLADIG 478
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QSL Q+LSTFSGH+ RI I E + SLVL+DE+G+GTD EG AL ++L+
Sbjct: 479 DQQSLSQSLSTFSGHLLRIKRIKEESTSSSLVLLDEVGTGTDFVEGAALGMAMLESFAAG 538
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
L + TTH+ +L LK D RFENA+ EF E L+PTYR+LWG G SNALNIA +G
Sbjct: 539 SLLTLATTHHGELKMLKYSDDRFENASVEFDEEKLKPTYRLLWGIPGRSNALNIAARLGL 598
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDS 583
+II A+ L E +E+ +L + R+K E + L E YR S
Sbjct: 599 PEEIIMEARSLHGAANAE-----LNEVIMTLEQARQKFEHDLSKSQKLLGETRRHYRALS 653
Query: 584 TS-ASISVYRY--------QFAVTSTLSKVDFDAI 609
+ I YR Q AV ++ D + +
Sbjct: 654 IAQKEIEEYRKTAALDANDQLAVAEAAARSDLNKL 688
>gi|187776956|ref|ZP_02993429.1| hypothetical protein CLOSPO_00500 [Clostridium sporogenes ATCC
15579]
gi|187775615|gb|EDU39417.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes ATCC 15579]
Length = 788
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 189/563 (33%), Positives = 291/563 (51%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SVYEVREHLQETKEAFKLLVTKGAPPFE--GVYDIRSGISLAEKGSTLLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L ++ + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINYKEEEES-----YRVLEDICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE ILS+L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG KHPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-KHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ +PI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------IPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL Q+L E+ K + AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540
>gi|168181815|ref|ZP_02616479.1| MutS2 family protein [Clostridium botulinum Bf]
gi|237796578|ref|YP_002864130.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum Ba4 str. 657]
gi|259511153|sp|C3KTI4.1|MUTS2_CLOB6 RecName: Full=MutS2 protein
gi|182674997|gb|EDT86958.1| MutS2 family protein [Clostridium botulinum Bf]
gi|229262891|gb|ACQ53924.1| MutS2 family protein [Clostridium botulinum Ba4 str. 657]
Length = 788
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 290/563 (51%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI + A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRNGIYLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + + + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFREYINHK-----EQEESYRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T RR R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRRDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL Q+L E+ K + AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540
>gi|410658584|ref|YP_006910955.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|410661571|ref|YP_006913942.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
gi|409020939|gb|AFV02970.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|409023927|gb|AFV05957.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
Length = 796
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 279/550 (50%), Gaps = 58/550 (10%)
Query: 23 LLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL +T +++ PL + +I L G L+P E+ +R TL+ +
Sbjct: 48 LLRETDEGKILLRINPLFSVRGAREIRPYLERCDRGGTLNPEELLEIRDTLKTARRLKNT 107
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
L + + D L E + E+E+ I I + I DRASE+L +R
Sbjct: 108 LIDGGQSGKDQYSELYTLRETVDGIVPQKEIEDDISRSI-SEDGDINDRASEELARLRKA 166
Query: 142 R----KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ +R E+LD +L+ + Q + +IT R R V IK + P GI +
Sbjct: 167 KGISQQRIKESLDGILRNPSYQKM----LQDNVITSRGDRYVVPIKMEYSSAFP-GIVHD 221
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT F+EP V+ N ++ E E IL LTA++ EI L + +++
Sbjct: 222 QSASGATLFIEPMAVVQLGNELREITLKENREVQKILQQLTAKVTARIPEILLLNEALIK 281
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D A+A ++ M+ P++ ++ V G +HPLL G P
Sbjct: 282 LDFILAKARLSEDMEAGSPLVMNKQEVKLI------GARHPLLTG--------------P 321
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
+ VPI + + + + ++ITGPNTGGKT ++KT+GL ++M
Sbjct: 322 V----------------------VPISVGLGMDDQFLIITGPNTGGKTVTLKTIGLMAVM 359
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
++GL++PA++ RL F I DIGD QS+EQ+LSTFS H++ IVDI SLVL+
Sbjct: 360 MQSGLHIPAESDSRLGIFTRIFVDIGDEQSVEQSLSTFSAHMTNIVDITREADSRSLVLL 419
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP EG ALA +IL L +R V TTHY L ENA+ EF+ ET
Sbjct: 420 DELGAGTDPGEGAALAMAILAELLERGSCGVATTHYGALKTFAYNTPGVENASVEFNPET 479
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
L+PTYR+L G G SNAL IA+ +G I+++A+ + + ++S+L ++L +
Sbjct: 480 LKPTYRLLTGIPGRSNALAIAQRLGLGSSILEKARSFI-----SERDTKESDLLENLEDT 534
Query: 558 RRKLESQART 567
+R++E + R+
Sbjct: 535 QREIELKKRS 544
>gi|160878313|ref|YP_001557281.1| MutS2 family protein [Clostridium phytofermentans ISDg]
gi|229486372|sp|A9KR74.1|MUTS2_CLOPH RecName: Full=MutS2 protein
gi|160426979|gb|ABX40542.1| MutS2 family protein [Clostridium phytofermentans ISDg]
Length = 796
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 287/578 (49%), Gaps = 83/578 (14%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGIL------NSAVSGQLLSPSEICAVR 69
LE+ ++ +T+ AL + ++ L S I DI L S +G+LL S +
Sbjct: 40 LEDIVQMQQETTDALTRLYAKGTLSFSGIPDIRDTLMRLEIGASLGAGELLKISSVLTA- 98
Query: 70 RTLRAVNNVW--KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
TLRA N + K E E D+L LLE L N +I CI + I
Sbjct: 99 -TLRAKNYGYNQKNNEETEEAAQDTLTERFHLLEPLSPIN------NEIRRCIISEEEIA 151
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
D AS L+ +R + K + + L + G + +IT R R C+ IK +K
Sbjct: 152 -DDASPGLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEYK 210
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
G+ + SS+G+T F+EP V+ NN L+ E E IL+ L+ +A +
Sbjct: 211 NTF-QGMMHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKYN 269
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+KY + E+D FARAG ++ M +SQ H + INI+ +HPL+
Sbjct: 270 LKYNQTTLAELDFIFARAGLSKNMK------ASQPHFNNRHYINIKKGRHPLI------- 316
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P K VPIDI + ++VITGPNTGGKT S
Sbjct: 317 --------DPKKV--------------------VPIDIYFGDKFDLLVITGPNTGGKTVS 348
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ V ILE
Sbjct: 349 LKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSILE 408
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ SLVL DE+G+GTDP+EG ALA +IL YL R + TTHY++L
Sbjct: 409 HANENSLVLFDELGAGTDPTEGAALAMAILSYLHQRKIRTMATTHYSELKIFALSTDGVS 468
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV------------ 535
NA EFS+ETL+PTYR+L G G SNA I+ +G II++A++ +
Sbjct: 469 NACCEFSVETLQPTYRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFIGTKDESFEDVIS 528
Query: 536 ---------ERLRPERQQHRK--SELYQSLMEERRKLE 562
E+ + E +Q++K EL + L E+ K++
Sbjct: 529 NLEASRIAMEKDKAEAEQYKKEVEELKRKLAEKNSKID 566
>gi|239827968|ref|YP_002950592.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus sp. WCH70]
gi|259511159|sp|C5D5Q8.1|MUTS2_GEOSW RecName: Full=MutS2 protein
gi|239808261|gb|ACS25326.1| MutS2 family protein [Geobacillus sp. WCH70]
Length = 784
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 265/516 (51%), Gaps = 57/516 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ AAL + PL I DI L A G LSP E+ + T+ A +
Sbjct: 47 QEETDEAVAALRLRGHVPL--GGIFDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + +D ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLAALPEVQQAIERCIDDHGEV-MDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+++++ +AQ + I IT R R + +K ++ + GI
Sbjct: 160 QLRTTEARVREKLENIIRSQSAQKMLSDAI----ITIRNDRYVIPVKQEYRGVY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT+ +A+ + +D +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTSIVAEHAEALLENVDILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P+++ + ++ + +HPL+
Sbjct: 275 QLDFIFAKAKYANKLKATKPVMNDRGYIRLLQA------RHPLI---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D VP DI++ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 -------------------DQDVVVPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F + ADIGD QS+EQ+LSTFS H+ IVDIL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSVYADIGDEQSIEQSLSTFSSHMVNIVDILRNVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
TLRPTY++L G G SNA I+K +G D +II+RA+
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLDERIIERAK 509
>gi|448238979|ref|YP_007403037.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
gi|445207821|gb|AGE23286.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
Length = 792
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 274/528 (51%), Gaps = 64/528 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L++T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 48 LEEVAAWLDETDEAAAVLRLAGYAPLD--GVVDIRPHLKRAAIGGTLSPQELLEVAATSA 105
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+++++ +AQ + +IT R R + +K ++
Sbjct: 159 SDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 274 LARAVESLAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 413 HVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGSRTVATTHYPELKAYGYNRPGVV 472
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 520
>gi|344996322|ref|YP_004798665.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
gi|343964541|gb|AEM73688.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 786
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 285/547 (52%), Gaps = 81/547 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL----QRYSPLLE 101
DI+ IL A + +L+P EI V + L+ V L A D L +R L E
Sbjct: 70 DISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANA---DSSYLKTIRERLFNLKE 126
Query: 102 LLKNCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLK 154
++ + FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 127 IIARIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLEARIRDELNKMIR 172
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE
Sbjct: 173 DPKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227
Query: 215 FNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N ++R++ SE EE IL L+ I+ S EIK + + E+D+ F +A +A
Sbjct: 228 ISN-QIRVARSEEKEEIERILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRA 286
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PIL++ + IN++ +HPL+ +
Sbjct: 287 SKPILNTAGY------INLKKARHPLIEKEKV---------------------------- 312
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA +
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGIFLPADEGSEVC 365
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL++L + V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SN
Sbjct: 426 KAILKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL I+ ++G +I++ A+ + + E +++ + +R++LE A L
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEETLENANKLKI 540
Query: 574 EIMDLYR 580
E +L +
Sbjct: 541 EAENLKK 547
>gi|167629882|ref|YP_001680381.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
gi|167592622|gb|ABZ84370.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
Length = 796
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 272/528 (51%), Gaps = 53/528 (10%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
P GK L + Q+ L++T+ A +++ +P + L+ DI L G +L +E+ V
Sbjct: 38 PKGK-LWQVQEGLSETTEAKEVLRLRPNVPLAAFHDIRPHLRKTAVGGILEAAELQQVAA 96
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
LR V L E GD + L L + E E +I CI + + D
Sbjct: 97 ALRISRQVRAFLL-GDEKKGDDKKSTPILTALAEGLGVYREAETEIDRCIVGEGEVADDA 155
Query: 131 ASEDLELIRAER---KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
+ E L++ R + R E LD+L++ Q + + L+T R R V +++ ++
Sbjct: 156 SPELLKIRRTMKTIQNRVREKLDALIRNPDTQKY----LQDALVTVRGDRYVVPVRSEYR 211
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + S+SGAT F+EP VE NN R +E E IL L+ +AK +
Sbjct: 212 SQIP-GLIHDQSASGATVFIEPMAVVELNNELKRNQAAERTEIIRILRDLSLLVAKDAED 270
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I ++ + +D FA+ + MD P +++Q + I +HPL+ G
Sbjct: 271 IGVSLEVLARLDFIFAKGKLSARMDAGEPAVNTQG------KLKIRQGRHPLIAGKV--- 321
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+ I++ +VITGPNTGGKT +
Sbjct: 322 ---------------------------------VPVTIELGHAFDTLVITGPNTGGKTVT 348
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM+++GL++PA+ L F+ I DIGD QS+EQ+LSTFS H++ IV IL+
Sbjct: 349 LKTVGLLTLMAQSGLHVPAEADTELSLFEHIFVDIGDEQSIEQSLSTFSSHMTNIVGILQ 408
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V SLVL+DE+G+GTDP+EG ALA +I+++L R + TTHY++L R E
Sbjct: 409 EVGPSSLVLLDELGAGTDPTEGAALAQAIMEHLLARGAKTIATTHYSELKAFAYSHDRVE 468
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF +ETLRPTYR+L G G SNA I+ +G +++R++ L+
Sbjct: 469 NASVEFDVETLRPTYRLLIGRPGRSNAFEISLRLGLREDVVKRSRSLL 516
>gi|312793836|ref|YP_004026759.1| muts2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180976|gb|ADQ41146.1| MutS2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 786
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 285/544 (52%), Gaps = 75/544 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQ-RYSPLLELLK 104
DI+ IL A + +L+P EI V + L+ V L A ++Q R L E++
Sbjct: 70 DISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANADSSYLKTIQERLFNLKEIIA 129
Query: 105 NCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLKKVA 157
+ FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 130 RIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLEARIRDELNKMIRDPK 175
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q F + +P+IT R ++ + +KA HK + GI + S++G+T F+EP VE +N
Sbjct: 176 IQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGSTLFVEPFVCVEISN 230
Query: 218 MEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
++R++ SE EE IL L+ I+ S EIK + + E+D+ F +A +A P
Sbjct: 231 -QIRVARSEEKEEIERILQELSQLISDSYNEIKQNFESLSELDILFTKARWAHQFRASKP 289
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
IL++ + IN++ +HPL+ +
Sbjct: 290 ILNTAGY------INLKKARHPLIEKEKV------------------------------- 312
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA + F
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA +I
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAI 428
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L++L + V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SNAL
Sbjct: 429 LKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALY 488
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+ ++G +I++ A+ + + E +++ + +R++LE A L E
Sbjct: 489 ISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEETLENANKLKIEAE 543
Query: 577 DLYR 580
+L +
Sbjct: 544 NLKK 547
>gi|225574101|ref|ZP_03782712.1| hypothetical protein RUMHYD_02166 [Blautia hydrogenotrophica DSM
10507]
gi|225038701|gb|EEG48947.1| MutS2 family protein [Blautia hydrogenotrophica DSM 10507]
Length = 793
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 276/546 (50%), Gaps = 74/546 (13%)
Query: 8 KAQIPFGKSL----------EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVS 56
KA P GK+L E+ Q + QT AL+ + Q L ++DI G +
Sbjct: 21 KASSPMGKNLCKDLKPCRDLEQIQTMQTQTKDALSRLFQKGTLSFHKVKDIRGSIKRLEI 80
Query: 57 GQLLSPSE---ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELE 113
G L E IC+V + + E D L + +N LT L
Sbjct: 81 GSTLGIGELLDICSVLENTAKAKSYGRFDRETETCDS--------LDAMFQNLEPLTPLS 132
Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKP 169
+I CI + I D AS L+ +R K R L+SLL A Q G
Sbjct: 133 SEIRRCILSEEEIS-DDASPGLKQVRRSMKITNDRIHSQLNSLLNGSARSYLQDG----- 186
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN +L E E
Sbjct: 187 VITMRNGRYCLPVKAEYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDLRQLEIQEQKE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+LS L+ + A+ + + ++ ++E+D FARAG A + +S+ + D
Sbjct: 246 IEIVLSDLSEQAAQYQEVLTDNLNILIELDFIFARAGLALEHN------ASEPQFNTDGK 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I ++ +HPL+ + VPIDI++
Sbjct: 300 IQLKKARHPLIHKKQV-----------------------------------VPIDIRLGD 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ ++V+TGPNTGGKT S+KT+GL +LM ++GL++PA +H L F+ + ADIGD QS+E
Sbjct: 325 DFDLLVVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPAGDHSVLSVFEEVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ +V LE + +SLVL DE+G+GTDP+EG ALA +IL +L + +
Sbjct: 385 QSLSTFSSHMTNVVSFLEKATDKSLVLFDELGAGTDPTEGAALAIAILSHLHRQGIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA I+ +G II+
Sbjct: 445 TTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDFIIE 504
Query: 530 RAQKLV 535
+A++ +
Sbjct: 505 KAKEQI 510
>gi|390456779|ref|ZP_10242307.1| MutS2 protein [Paenibacillus peoriae KCTC 3763]
Length = 788
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 291/581 (50%), Gaps = 90/581 (15%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +KLL T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ + SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVCVA--------SLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLV 535
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ QR + ++
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEVTEEDQRVEHMI 522
Query: 536 ERLRPER----QQHRKSELYQSLMEERR--------KLESQ 564
L R Q+ K+E ++ ME R KLESQ
Sbjct: 523 ASLEQNRLTAEQEREKAEQLRTEMEALRSRHQTELDKLESQ 563
>gi|456014379|gb|EMF47994.1| Recombination inhibitory protein MutS2 [Planococcus halocryophilus
Or1]
Length = 786
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 205/636 (32%), Positives = 302/636 (47%), Gaps = 99/636 (15%)
Query: 24 LNQTSAALAMMQ--SQPLDLSTIEDIAGILN------SAVSGQLLSPSEICAVRRTLRAV 75
+NQ + L M +Q L + + GI + A G LSP E+ V T+RA
Sbjct: 41 INQVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLQARRAQIGGSLSPMELMEVSSTVRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + ++ E + + D +Q LE ++ LT LE I CID + LD AS +L
Sbjct: 100 SRILRQFFETIQ-EEDVVQ-IPHFLEKKESMPILTVLEHAINVCIDDNGGV-LDSASTEL 156
Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
IR + R E L+SL++ K A+++ + ++T R R + +K ++
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRSHY 211
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP V+ NN RL E E IL +L+A++ + E+
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDSVVQANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFV 270
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+D + EIDL A+A + G P ++++ + IN++ +HP++
Sbjct: 271 LVDVLGEIDLILAKAKYGSAHKGTKPTMNTEGY------INLKKARHPMI---------- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P D VP DI+ E +VITGPNTGGKT ++KT
Sbjct: 315 ------P-------------------RDEVVPNDIEFGREITAIVITGPNTGGKTVTLKT 349
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GLA+LM+++GL +PA + L FD I ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 350 VGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLV+ DE+G+GTDP EG ALA S+L + R + TTHY +L NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGFNRPGVANAS 469
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--------------- 535
EF +ETL PTYR+L G G SNA I+K +G II A+
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHAKSFTGTDSKAVDSMIASLE 529
Query: 536 -ERLRPERQQHR-----------KSELYQSLMEERRKLESQARTAASLHAEIMDLYREDS 583
R ER R K EL Q L E ++ E + A +I+D R ++
Sbjct: 530 KSRREAERDAERTQEVLSESEQLKKELAQQLEEYEKQKEQREEKAKEKARKIVDEARAEA 589
Query: 584 TSASISVYRYQFAVTSTLSKVDF--------DAIPN 611
S + + Q S++ + + DA+P
Sbjct: 590 ESVISELRKMQLNQGSSVKEHELIYAKKRLEDAMPQ 625
>gi|23099579|ref|NP_693045.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
gi|81746034|sp|Q8EPI1.1|MUTS2_OCEIH RecName: Full=MutS2 protein
gi|22777809|dbj|BAC14080.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
Length = 782
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 271/526 (51%), Gaps = 62/526 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL++ L ++T A +++ +Q + L I DI + + G +LS E V TL
Sbjct: 39 SLDKINMLQDETDEAAKIIRLNQAIPLGGITDIRASVKRSSIGGILSTDECLDVANTLYG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
NV + ELD P+L EL+++ + ELE+ I CID I +D AS
Sbjct: 99 SRNVKNTIENMEELD-------IPILKELVEHITPIRELEQAIKSCIDDHGHI-MDGASS 150
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR+ R E L++ + + + A +IT R R + +K ++
Sbjct: 151 QLRSIRSSIRTLESRIREKLENYTRSNSKMLSDA------IITIRNDRYVLPVKQEYRGA 204
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ GI + S+SG T FMEPK V+ NN + E E IL L+ ++A E+++
Sbjct: 205 I-GGIVHDQSASGQTLFMEPKAVVDINNSLHESKSKEQLEIERILKDLSNQVASYEQDLL 263
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + ID +AR AQ M P ++ + ++ + +HP++
Sbjct: 264 ENVKVLTNIDFIYARGKLAQAMKASRPKMNDEGYMKMQQA------RHPMI--------- 308
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P+ V N DI+ E +VITGPNTGGKT ++K
Sbjct: 309 -------PIDEVVAN-------------------DIEFGREYTSIVITGPNTGGKTVTLK 342
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
+GL +LM+++GL +PA + +P FD + ADIGD QS+EQNLSTFS H++ IVDI++ +
Sbjct: 343 LVGLCTLMAQSGLQVPALDGCEMPVFDEVFADIGDEQSIEQNLSTFSSHMTNIVDIMKKI 402
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+GSGTDP EG ALA +IL + + + TTHY +L + NA
Sbjct: 403 TDRSLVLFDELGSGTDPQEGAALAMAILDEVISKQARVIATTHYPELKAYGYNREQVVNA 462
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ EF++ETL+PTYR+L G G SNA +I+ +G +R I+RA+ L+
Sbjct: 463 SVEFNVETLKPTYRLLIGVPGRSNAFDISTRLGLERATIERAKSLI 508
>gi|375009800|ref|YP_004983433.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288649|gb|AEV20333.1| hypothetical protein GTCCBUS3UF5_30300 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 784
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 274/528 (51%), Gaps = 64/528 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L +T A A+++ PLD + +I L A G +LSP E+ TL
Sbjct: 40 LEEVAAWLEETDEAAAVLRLAGYAPLD--GVVNIRPHLKRAAIGGVLSPQELVETASTLT 97
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 98 ASRQMKRLIMDLHEEQGGLDRLSIYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 151 SDRLRSLRGQIRSVETRIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 207 SAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++++ ++ F + +HPLL
Sbjct: 266 LARAVESLAALDFAFAKAKYARRLQAAKPAVNNRGYLRFVQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 313 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 345 LKTVGLLTLMAQAGLFIPAADGSEAAVFRAVYADIGDEQSIEQSLSTFSSHMVNIVDILR 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V +SLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 405 HVDGQSLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 465 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 512
>gi|153932430|ref|YP_001385445.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936995|ref|YP_001388852.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. Hall]
gi|229486367|sp|A7FY72.1|MUTS2_CLOB1 RecName: Full=MutS2 protein
gi|152928474|gb|ABS33974.1| MutS2 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152932909|gb|ABS38408.1| MutS2 family protein [Clostridium botulinum A str. Hall]
Length = 788
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +++N + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL Q+L E+ K + AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540
>gi|295696872|ref|YP_003590110.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
gi|295412474|gb|ADG06966.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
Length = 783
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 284/601 (47%), Gaps = 94/601 (15%)
Query: 9 AQIPFGKSL----------EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSG 57
AQ GK+L EE + +T A A + + + L D+ + A G
Sbjct: 22 AQTDMGKTLALELLPSSDEEEVRSWCRETDEAQAWDRLAGGVSLQGATDVTESVRRAARG 81
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
+LSP ++ A +R V + L + S R L L L LE+ I
Sbjct: 82 GVLSPEQLYATAELMRVGRRVQRSLEQV-----QSKARTPQLQALASGIPELPALEKAIR 136
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLIT 172
+ + ILD AS +L +R RKR + + LD L++ Q + + +PL+T
Sbjct: 137 ESVG-EDGAILDGASSELAALR-RRKRALADRIRGALDELIRNPNTQKY----LQEPLVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R CV ++ K GI + S+SG T+F+EP V N L E E
Sbjct: 191 VRDGRYCVPVRVEFKNSF-RGIVHDQSASGQTWFIEPAAIVPLGNELRGLEAQEEREIER 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL L+A + + E + ++ + +D A A++ AQ MD V P H + +
Sbjct: 250 ILVRLSALVGQEESGLSKAVECLGRLDFALAKSRLAQQMDAVSP------HFVGGGKLRL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ + VP+D+ + E
Sbjct: 304 RRCRHPLIPKERV-----------------------------------VPVDVLIGDEYH 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++ITGPNTGGKT +KT GL + M++AGL++PA L F+ I ADIGD QS+EQ+L
Sbjct: 329 ALIITGPNTGGKTVVLKTAGLLTCMAQAGLFIPAAEGSELSVFERIFADIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFSGH+ I++IL+ V+ SLVL+DEIG+GTDP+EG ALA +ILQ+ DR + TTH
Sbjct: 389 STFSGHMKHIIEILDQVNERSLVLLDEIGAGTDPAEGAALAEAILQFFVDRGIRTIATTH 448
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA- 531
Y DL NA+ EF ETLRPTYR+L G G SNAL +A +G ++I+ RA
Sbjct: 449 YGDLKAFAYTTPGVMNASVEFDPETLRPTYRLLIGVPGRSNALAVAARLGLGQEILDRAR 508
Query: 532 ----------QKLVERLRPERQQHRK------------SELYQSLMEERRKLESQA--RT 567
+ ++ +L R Q R+ S L Q E R+ E++A RT
Sbjct: 509 HRLGADDVRVEDMIRQLETARNQAREEADRARLDREEASRLRQQWESEVRRWEAEADQRT 568
Query: 568 A 568
A
Sbjct: 569 A 569
>gi|350269070|ref|YP_004880378.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
gi|348593912|dbj|BAK97872.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
Length = 795
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 283/561 (50%), Gaps = 69/561 (12%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE +LL+QT AA M ++ P S ++ + L+ A G L+ E+ + L A
Sbjct: 44 EEVLRLLDQTDAAREMIGLRGSP-SFSGLKPVREALDRADRGGGLNTRELLTIAGLLTAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
++ E D L L FL E++I I I D AS +L
Sbjct: 103 ----RRTREYFNADTGEKSAIDHLFLSLHGNRFL---EDRIKSVI-LDEDTISDNASPEL 154
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +L+++ + + + + LIT+R R V +KA K LP G+
Sbjct: 155 NDIRRKMRAAQAKSRQVLQRIISSPSYSKVLQESLITQRDGRFVVPVKAEQKAALP-GLV 213
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+VSS+GAT F+EP G V+ NN + L E E IL+ L+A+ A +I++ D +
Sbjct: 214 HDVSSTGATLFVEPMGVVQANNEYIELEAREKKEIERILAELSADAANHREDIQWDYDAL 273
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +DL FAR + +DGV P + D +I + +HPLL +
Sbjct: 274 VHLDLIFARGQLSYKLDGVRP------EIRRDGAIVLRKARHPLLDRAK----------- 316
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPIDI++ +VITGPNTGGKT S+KTLGL +
Sbjct: 317 ------------------------AVPIDIELGDSFDTLVITGPNTGGKTVSLKTLGLLT 352
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++ GL++PA + ++ ++ +LAD+GD QS+EQ+LSTFS H++ IV IL+ + +LV
Sbjct: 353 LMAQCGLHIPAASGSQISVYERVLADVGDEQSIEQSLSTFSAHMTSIVRILQETDQRTLV 412
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA +I+Q +R TTHYA+L ENA+ EF +
Sbjct: 413 LFDELGAGTDPVEGAALAIAIIQQVRRFGAKLAATTHYAELKTFAMTTAGVENASCEFDV 472
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ-----------RAQKLVERLRPERQQ 544
E+L+PTYR+L G G SNA I++ +G +++ R + ++ +L +RQ
Sbjct: 473 ESLQPTYRLLIGIPGKSNAFAISRRLGLPDDVVEDAKAQMAGDSVRFEDVLTQLEQKRQA 532
Query: 545 HRKSE-----LYQSLMEERRK 560
K + LYQ E+ RK
Sbjct: 533 LEKKQVEVDRLYQQREEDARK 553
>gi|168179617|ref|ZP_02614281.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226950552|ref|YP_002805643.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A2 str. Kyoto]
gi|421835524|ref|ZP_16270271.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
gi|254766595|sp|C1FKL4.1|MUTS2_CLOBJ RecName: Full=MutS2 protein
gi|182669561|gb|EDT81537.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226843815|gb|ACO86481.1| MutS2 family protein [Clostridium botulinum A2 str. Kyoto]
gi|409742817|gb|EKN42043.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
Length = 788
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +++N + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL ++L E+ K E AR A +L
Sbjct: 518 ELIENLQEKSIKAEEDARLAENL 540
>gi|438001664|ref|YP_007271407.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
acetatoxydans Re1]
gi|432178458|emb|CCP25431.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
acetatoxydans Re1]
Length = 549
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 278/519 (53%), Gaps = 61/519 (11%)
Query: 23 LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA---VNNV 78
L +TS LA++ S + L I+DI LN A G +LSP E+ + T+RA + +
Sbjct: 46 LQRETSEGLALLNSGIKISLRGIKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSA 105
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
W + A DS+ + E++ + LEEKI I D + I D AS L
Sbjct: 106 WNEKKPA-----DSV----IINEIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLS 153
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR ++K +++ + L ++ + + + P++T R+ R V +K + + G+
Sbjct: 154 SIRRQKKNLAQSIRNKLNEIISSPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIH 212
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT ++EP ++ NN +L E E IL + ++ ++ I + +
Sbjct: 213 DQSASGATLYIEPMAVMQMNNELRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLA 272
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D A+AG++ + G PI +++ +++ I+G +HPLL G
Sbjct: 273 HLDFIMAKAGYSLDIKGTEPIFNNRGYINI-----IQG-RHPLLKGEV------------ 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP+D+ + E +++ITGPNTGGKT ++KT+GL L
Sbjct: 315 ------------------------VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFIL 350
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL+LPA+ + F+ + ADIGD QS+EQ+LSTFS H+ I +IL+L +++SL++
Sbjct: 351 MAQSGLHLPAQEGTEVSIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLII 410
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA +IL YL ++ + TTHY++L ENA+ EF ++
Sbjct: 411 LDELGAGTDPTEGAALAMAILNYLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQ 470
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTYR+ G G SNA IAK +G ++++ + L+
Sbjct: 471 TLSPTYRLTIGIPGKSNAFEIAKRLGLKQEVVDLGKSLM 509
>gi|407473381|ref|YP_006787781.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407049889|gb|AFS77934.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 792
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 270/524 (51%), Gaps = 53/524 (10%)
Query: 18 EESQKLLNQTSAALAMM---QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
EE + L ++T A++++ S PL I D+ + A G +LSP + V T+RA
Sbjct: 41 EEVKYLQDETDEAVSLLLKRGSPPL--GGIHDVLSEVKRAEIGGILSPGGLLRVADTIRA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ L + + + S P+LE L+ + N E+E+ I F I D AS
Sbjct: 99 ARKIKGFLKQEKDENNSSY----PILESLIGDLNSYREIEDNI-FNAIVSEEEISDNASS 153
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
+L IR + + +N+ + L + + +IT R R V +K ++ + P G
Sbjct: 154 NLRNIRKQIQIKNDNIRTKLNSIINSSTNKKYLQDAIITIRSERYVVPVKQEYRSIFP-G 212
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + SSSGAT F+EP V NN L +E E IL+ L+ + + I+
Sbjct: 213 LIHDQSSSGATLFIEPMAIVNLNNELKELKLNEKKEIEKILTELSEMVGEENEGIRSNQK 272
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ +ID FA+ + M+G P ++++ + INI+ +HPLL
Sbjct: 273 ILSQIDFIFAKGKLSLDMNGSKPNINNRGY------INIKKGRHPLL------------- 313
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
G+ D VP DI + ++ITGPNTGGKT ++KT+GL
Sbjct: 314 ---------------------GVKDV-VPTDIYLGDNFTTLLITGPNTGGKTVTLKTVGL 351
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM ++GL +P ++ + F+ I ADIGD QS+EQ+LSTFS H++ IVDIL + S
Sbjct: 352 FTLMMQSGLQVPVEHGTEMAVFENIFADIGDEQSIEQSLSTFSSHMTNIVDILNNLDDNS 411
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP+EG ALA SIL YL +R V TTHY++L ENA+ EF
Sbjct: 412 LVLFDELGAGTDPTEGAALAMSILDYLYNRKIRTVATTHYSELKVYALTTEGIENASVEF 471
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
++ETL PTYR+L G G SNA I+K +G II A++ + +
Sbjct: 472 NVETLSPTYRLLIGVPGKSNAFEISKRLGLQDFIIDSAKEFISK 515
>gi|332798676|ref|YP_004460175.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696411|gb|AEE90868.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
Length = 787
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 278/519 (53%), Gaps = 61/519 (11%)
Query: 23 LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA---VNNV 78
L +TS LA++ S + L I+DI LN A G +LSP E+ + T+RA + +
Sbjct: 46 LQRETSEGLALLNSGIKISLRGIKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSA 105
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
W + A DS+ + E++ + LEEKI I D + I D AS L
Sbjct: 106 WNEKKPA-----DSV----IINEIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLS 153
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR ++K +++ + L ++ + + + P++T R+ R V +K + + G+
Sbjct: 154 SIRRQKKNLAQSIRNKLNEIISSPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIH 212
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT ++EP ++ NN +L E E IL + ++ ++ I + +
Sbjct: 213 DQSASGATLYIEPMAVMQMNNELRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLA 272
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D A+AG++ + G PI +++ +++ I+G +HPLL G
Sbjct: 273 HLDFIMAKAGYSLDIKGTEPIFNNRGYINI-----IQG-RHPLLKGEV------------ 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP+D+ + E +++ITGPNTGGKT ++KT+GL L
Sbjct: 315 ------------------------VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFIL 350
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL+LPA+ + F+ + ADIGD QS+EQ+LSTFS H+ I +IL+L +++SL++
Sbjct: 351 MAQSGLHLPAQEGTEVSIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLII 410
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA +IL YL ++ + TTHY++L ENA+ EF ++
Sbjct: 411 LDELGAGTDPTEGAALAMAILNYLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQ 470
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTYR+ G G SNA IAK +G ++++ + L+
Sbjct: 471 TLSPTYRLTIGIPGKSNAFEIAKRLGLKQEVVDLGKSLM 509
>gi|148381072|ref|YP_001255613.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 3502]
gi|148290556|emb|CAL84684.1| putative DNA mismatch repair protein [Clostridium botulinum A str.
ATCC 3502]
Length = 788
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +++N + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYVLRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL Q+L E+ K + AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540
>gi|253682073|ref|ZP_04862870.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum D str. 1873]
gi|253561785|gb|EES91237.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum D str. 1873]
Length = 785
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 257/488 (52%), Gaps = 50/488 (10%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++Y+ L + + L+ LEE+I CI + I DRAS L IR K ++
Sbjct: 110 DENEKYTVLESITEGIVPLSGLEEEIFKCIIGEEEI-SDRASTTLFNIRRSLKDKTSSIK 168
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
S + + Q + + + T R R + +K HK +P G+ + SSSGAT F+EP
Sbjct: 169 SRVNSLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPM 225
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V+ NN L E E IL++L+ ++ + IK D + E+D FA+A +A
Sbjct: 226 SLVDLNNEIKELRLKERDEIERILTVLSQKVYDNIDVIKVNADILWELDFIFAKAKYAAK 285
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+D +CP ++ H NI KHPL+ +P K VEN+
Sbjct: 286 LDAICPTITEDGH------FNIIRAKHPLI---------------DP-KKVVENNIY--- 320
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
L GI+ VITGPNTGGKT ++KT+GL +M+ +GL + A
Sbjct: 321 -LRDGITSL---------------VITGPNTGGKTVTLKTVGLMHIMAMSGLMITASQGS 364
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+ +F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG
Sbjct: 365 TISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGA 424
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL+ LR+R + TTHY++L K R ENA+ EF +ETLRPTYR+L G G
Sbjct: 425 ALAVSILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPG 484
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+K +G II+ A+K + + + + +L QSL + K + AR A
Sbjct: 485 KSNAFEISKRLGLPDYIIEDAKKGI-----DEETLKFEDLIQSLQHKNIKAQEHAREAQG 539
Query: 571 LHAEIMDL 578
E + L
Sbjct: 540 AREEAVKL 547
>gi|253579597|ref|ZP_04856866.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849098|gb|EES77059.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 793
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 196/597 (32%), Positives = 302/597 (50%), Gaps = 92/597 (15%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQL 59
MG + +K + P ++E + + QT AL + Q + +++D+ G L G
Sbjct: 26 MGKEICRKLE-P-STDIDEIRHMQTQTRDALTRLFQKGNISFGSVKDVRGSLKRLEIGSS 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAE--------LDG--DSLQRYSPLLELLKNCNFL 109
L E+ A+ L N V K +E LDG ++L+ +PL ++ C L
Sbjct: 84 LGIGELLAICSLLENTNRV--KAYSRSERGDSLPDSLDGMFEALEPLTPLTTEIRRC-IL 140
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME--------NLDSLLKKVAAQIF 161
+E E I D AS +L IR RNM+ L SL+ A
Sbjct: 141 SEDE-------------ISDDASSNLRQIR----RNMKITGDRIHTQLSSLVNGSARNYL 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
Q +IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN
Sbjct: 184 Q-----DSVITMRNGRYCIPVKAEYKGQVP-GMVHDQSSTGSTLFIEPMAIVKLNNDIRE 237
Query: 222 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
L E E ILS L+ + A+ I+ ++ ++++D+ FARA A M+ PI + +
Sbjct: 238 LELEEQKEIEVILSTLSQQTAEQTDSIRADLNIMVQLDVIFARASLAMDMNATEPIFNDE 297
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
I ++ +HPL+ D + + V
Sbjct: 298 GR------IRLKQARHPLI--------------------DKKKA---------------V 316
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
PIDI++ + ++VITGPNTGGKT S+KT+GL +LM ++GL++P + L F+ + AD
Sbjct: 317 PIDIRLGDDFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGLHIPTLDRSELALFEEVYAD 376
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ +V L+ +R SLVL DE+G+GTDP+EG ALA +IL +L
Sbjct: 377 IGDEQSIEQSLSTFSSHMTNVVSFLKKANRHSLVLFDELGAGTDPTEGAALAIAILSHLH 436
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
++ + TTHY++L + ENA EF +ETLRPTYR+L G G SNA I+ +
Sbjct: 437 EQGIRTMATTHYSELKVYALSTSGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKL 496
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI 575
G II +A++ + + E + S L S + ERR++E + ASL +E+
Sbjct: 497 GLPDYIIDKAKEQISE-QDESFEDVLSSLESSRITIENERREIEQYKQEIASLKSEM 552
>gi|431792234|ref|YP_007219139.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782460|gb|AGA67743.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 789
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 286/565 (50%), Gaps = 72/565 (12%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
PF L+ ++ L +T A ++++ PL + ++I +L + G L+P E+ +R
Sbjct: 38 PFA-HLDLVREALEETGEAKSILRVNPLFSVRGAKEIRPLLERCLRGGTLTPDELLQIRD 96
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEEKIGFCI--DCKLLII 127
TL+A V + L E + +P L+ + L + +EE+I CI D + +
Sbjct: 97 TLKAARYVKQSLLEG--------KVETPHLKGIMESVLLPKGIEEEISRCITEDGQ---V 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIK 183
D+AS L E +R + L S +++ I + K P+IT+R R V +K
Sbjct: 146 ADQASPLL----TELRRGIGRLQSRIRETLEGIIRNPSYQKILQDPIITQRSERYVVPVK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + S+SGAT F+EP V N + E E IL LL+A +
Sbjct: 202 QEYRQAF-QGIVHDQSASGATLFIEPMTVVNLGNELREVILKEQREVQRILLLLSARVEG 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
I + + +D A+A ++ M+ PIL+ + +S + +HPLL G
Sbjct: 261 EVEAIAETHEALARVDFILAKAHLSEGMNAGAPILTDKQEISLVQA------RHPLLTGK 314
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
VP+ I++ VV+TGPNTGG
Sbjct: 315 V------------------------------------VPLTIELGTRFDTVVVTGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KTLGL + M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV
Sbjct: 339 KTVALKTLGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMRNIV 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+I+E SL+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L
Sbjct: 399 EIVEKADERSLILLDEVGAGTDPTEGSALAMAIIAQLHERGSRIVATTHYGALKNFAYNT 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
R ENA+ EF ETLRPTYR+L G G SNA IA +G +++ RA+ V ER+
Sbjct: 459 PRVENASVEFDSETLRPTYRLLIGIPGKSNAFYIAGRLGLPEEVLVRARTYV----TERE 514
Query: 544 QHRKSELYQSLMEERRKLESQARTA 568
++L ++L + +R+++ + R A
Sbjct: 515 MQ-VADLIENLEDTQREIDFEKRRA 538
>gi|334138498|ref|ZP_08511917.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
gi|333604147|gb|EGL15542.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
Length = 825
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 283/539 (52%), Gaps = 69/539 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI ++ A G +L+PSE+ + T+ + K L +++ P+ LL
Sbjct: 107 IRDIRAAVHRARVGGMLNPSELLDIATTIYGGRRLRKFL--------ETMDEQHPVPMLL 158
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
L++ E++I CID ++D AS +L +R+E + R E L+ +++
Sbjct: 159 SWAELLSDNKDTEDRIKSCIDDNA-AVMDSASGELSRVRSELRTGEARVREKLEQMIRNP 217
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V N
Sbjct: 218 SVQKM----LQDALVTMRGDRYVIPVKQEYRSSF-GGMIHDQSASGATLFIEPEAVVTLN 272
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +LT+++A+ E ++ ++ + ++D FA+AG A+ M P
Sbjct: 273 NRIRELKFKEEAEVEKILRMLTSQVAEIEEDLLSDVELLAQLDFTFAKAGLAREMKATLP 332
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
L+ + + + +HPL+ PL
Sbjct: 333 KLNDRGFLKLKRA------RHPLI----------------PL------------------ 352
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPID+++ +++TGPNTGGKT S+KT+GL SLM+ +GL++PA+ L FD
Sbjct: 353 -DKVVPIDLELGGSFTTIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPAEEGSELCVFD 411
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA S+
Sbjct: 412 GIFADIGDEQSIEQSLSTFSSHMTNIIGILRDMTPKSLVLLDELGAGTDPAEGSALAISL 471
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L+ + R+G ++ TTHY++L + NA+ EF ++TL PTYR+L G G SNA
Sbjct: 472 LENIH-RMGCRMIATTHYSELKAYAFERRGVINASMEFDVQTLSPTYRLLVGVPGRSNAF 530
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
IA+ +G R II +A+ V + R + SL E R E++ +A + E
Sbjct: 531 AIAERLGLPRAIIDKARGQV-----SDEDQRVETMIASLEENRLTAEAERHSAEQIRRE 584
>gi|399046291|ref|ZP_10738749.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|433543508|ref|ZP_20499913.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
gi|398055652|gb|EJL47713.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|432185182|gb|ELK42678.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
Length = 785
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 269/518 (51%), Gaps = 60/518 (11%)
Query: 20 SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+Q+ + + L + S PL I DI G + A +L+P E+ + T+ A +
Sbjct: 46 AQQGTEEAATVLRLKGSAPL--GGIRDIRGSVQRARLNAMLAPMELLDIASTVMAGRRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
L + E PL+ + + L ELE +I CID ++D AS +L +
Sbjct: 104 TFLLDMCE------DHEMPLIKQQAERIEGLRELEMEIRRCIDENG-DVMDSASMELRQV 156
Query: 139 RAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R E + R E LD + + + Q + + ++T R R + +K ++++ GI
Sbjct: 157 RQEIRQVESRIREKLDQMTRSSSYQKM----LMENIVTIRGDRFVIPVKQEYRHVF-GGI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT F+EP+ V NN L E E IL LLT ++A + + +D
Sbjct: 212 VHDQSASGATLFIEPEVIVSMNNKLRELRLREEREVERILYLLTEQVAFAVDALVENVDA 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ E+D FA+A A M VCP L+ + + +N++ +HPL+
Sbjct: 272 LTELDFMFAKAQLAWSMKAVCPKLNDRGY------LNMKKARHPLI-------------- 311
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
P + VP+D+++ E + +V+TGPNTGGKT S+KT+GL
Sbjct: 312 --P-------------------REVVVPVDVELGGEYQAIVVTGPNTGGKTVSLKTIGLL 350
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
SLM+ AGL++PA+ + F + ADIGD QS+EQ+LSTFS H+ I+ ILE + +SL
Sbjct: 351 SLMAMAGLHIPAEEESEMTVFSSVFADIGDEQSIEQSLSTFSSHMKNIISILEKMDAKSL 410
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL DE+G+GTDP+EG ALA SI+ ++ D V TTHY++L NA+ EF
Sbjct: 411 VLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYDRPEVINASVEFD 470
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
++TLRPTYR+L G G SNA IA+ +G II+ A+
Sbjct: 471 VQTLRPTYRLLVGVPGRSNAFAIARRLGLPEAIIEVAR 508
>gi|331269166|ref|YP_004395658.1| MutS2 family protein [Clostridium botulinum BKT015925]
gi|329125716|gb|AEB75661.1| MutS2 family protein [Clostridium botulinum BKT015925]
Length = 785
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 257/488 (52%), Gaps = 50/488 (10%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++Y+ L + + L+ LEE+I CI + + DRAS L IR K ++
Sbjct: 110 DENEKYTVLESITEGIVPLSGLEEEIFKCIIGEDEL-SDRASTTLFNIRRSLKDKTSSIK 168
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
S + + Q + + + T R R + +K HK +P G+ + SSSGAT F+EP
Sbjct: 169 SRVNSLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPM 225
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V+ NN L E E IL++L+ ++ + IK D + E+D FA+A +A
Sbjct: 226 SLVDLNNEIKELRLKERDEIERILTVLSGKVYDNIDVIKVNADILWELDFIFAKAKYAAK 285
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+D +CP +S H NI KHPL+ K VEN+
Sbjct: 286 LDAICPTISEDGH------FNIIRAKHPLI----------------DTKKVVENNIY--- 320
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
L +GI+ +VITGPNTGGKT ++KT+GL +M+ +GL + A
Sbjct: 321 -LREGITS---------------LVITGPNTGGKTVTLKTVGLMHIMAMSGLMITAAQGS 364
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+ +F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG
Sbjct: 365 TISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGA 424
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL+ LR+R + TTHY++L K R ENA+ EF +ETLRPTYR+L G G
Sbjct: 425 ALAVSILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPG 484
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+K +G II+ A+K + + + + +L QSL + K + AR A
Sbjct: 485 KSNAFEISKRLGLPDYIIEDAKKGI-----DEETLKFEDLIQSLQHKNIKAQEHAREAEG 539
Query: 571 LHAEIMDL 578
E + L
Sbjct: 540 AREEAVKL 547
>gi|56964440|ref|YP_176171.1| recombination and DNA strand exchange inhibitor protein [Bacillus
clausii KSM-K16]
gi|81678829|sp|Q5WEK0.1|MUTS2_BACSK RecName: Full=MutS2 protein
gi|56910683|dbj|BAD65210.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
Length = 787
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 271/519 (52%), Gaps = 49/519 (9%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLEE + L ++T+ A +++ + + L I D+ + A G +LS +E+ + TL
Sbjct: 38 SLEEVRHLQDETAEAANVLRLKGHVPLGGISDVRPHIKRAAIGGVLSATELIEIASTLYG 97
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V K+ E DG P+L ++ L+ +E+ I CID + LD AS
Sbjct: 98 GKRV-KQFIETIIEDG---HIEVPILAGHVEQIEPLSPIEKAIKQCIDDNGYV-LDSAST 152
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L +R + + + S L ++ + ++T R R + +K ++ G
Sbjct: 153 SLRTVRHQIRSYESGIKSKLDQLTRSSNTRKMLSDAIVTIRSDRYVLPVKQEYRGTF-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + SSSGAT F+EP V NN E E IL L+A++A+ ++ +D
Sbjct: 212 IVHDQSSSGATLFIEPAAIVTLNNQLTEAKAKEKREIERILRELSAKVAEESEQLLLNVD 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
++ ++D A+A +A+ + V P L+ + + +++ +HPLL
Sbjct: 272 KLAQLDFICAKAYYAKAVKAVKPTLNDRGY------LDLRQARHPLL------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
P D VP D+ + + R +VITGPNTGGKT ++KT+GL
Sbjct: 313 ---P-------------------PDKVVPSDMAIGDQVRSLVITGPNTGGKTVTLKTIGL 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM+++GL++PA L F+ I ADIGD QS+EQ+LSTFS H+ IV IL ++ S
Sbjct: 351 LTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNENS 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
L+L DE+G+GTDP+EG ALA SIL ++ R LAV TTHY++L NA+ EF
Sbjct: 411 LILFDELGAGTDPTEGAALAISILDHVYKRGALAVATTHYSELKGYAYNREGALNASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ETLRPTYR+L G G SNA I++ +G D +II +A+
Sbjct: 471 DVETLRPTYRLLVGVPGRSNAFAISRRLGLDERIIDQAK 509
>gi|312135400|ref|YP_004002738.1| muts2 family protein [Caldicellulosiruptor owensensis OL]
gi|311775451|gb|ADQ04938.1| MutS2 family protein [Caldicellulosiruptor owensensis OL]
Length = 786
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 286/544 (52%), Gaps = 75/544 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA-AELDGDSLQRYSPLLELLK 104
DI+ IL A + +L+P EI V R L+ V L A S +R L EL
Sbjct: 70 DISLILKKAKAQAILTPHEILEVARILKLSQEVKSYLANAVGSCLKSSRERLFNLKELTA 129
Query: 105 NCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVA 157
+ FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 130 RIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLETRIRDELNRMIRDPK 175
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE +N
Sbjct: 176 IQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN 230
Query: 218 MEVRLSNSEIAEETAI-LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
++R++ SE EE L L+ I+ S EIK + + E+D+ F +A +A P
Sbjct: 231 -QIRVARSEEKEEIEKILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKP 289
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
IL++ + IN++ +HPL+ +
Sbjct: 290 ILNTAGY------INLKKARHPLIEKEKV------------------------------- 312
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA + F
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA +I
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADNSTLVLLDEIGSGTDPEEGAALAKAI 428
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L++L ++ V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SNAL
Sbjct: 429 LKFLHNKGAKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALY 488
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+ ++G +++I++ A+ + + E +++ + +R++LE +A L E
Sbjct: 489 ISSNLGLNKEIVELAKSYMSKKMLEL-----TDIINEMERKRKELEEVLESANKLKIETE 543
Query: 577 DLYR 580
+L +
Sbjct: 544 NLKK 547
>gi|392391882|ref|YP_006428484.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390522960|gb|AFL98690.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 789
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 278/556 (50%), Gaps = 77/556 (13%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T ++++ PL + +I L + G L+P E+ +R TL+A + + L
Sbjct: 49 LEETGEGKSILRINPLFSVRGAREIRPYLERCLKGGTLTPDELLHIRDTLKAARIIKQSL 108
Query: 83 ----TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
TE L G +++ +EE+I CI D + + D+AS L
Sbjct: 109 QEGKTEVPHLKG-----------IMEQVILPKGIEEEITRCITEDGQ---VADQASPALA 154
Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
+R + R E LD +++ A Q + P+IT+R R V +K ++ P
Sbjct: 155 DLRRGVSRLQTRIRETLDGIIRNPAYQKI----LQDPIITQRSERYVVPVKQEYRQSFP- 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SGAT ++EP V N + E E IL LL++ + I
Sbjct: 210 GIVHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSSRVEGEAEAIADAH 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + +D A+A ++ M+ P+L+ + +S + +HPLL G
Sbjct: 270 EALARVDFILAKARLSEEMNAGAPVLTEKQEISLVQA------RHPLLTGKV-------- 315
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VP+ I++ VV+TGPNTGGKT ++KT+G
Sbjct: 316 ----------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIG 347
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L + M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I++ R
Sbjct: 348 LLAAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVQKADRR 407
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SL+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L TR ENA+ E
Sbjct: 408 SLILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVE 467
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F E+LRPTYR+L G G SNA IA +G ++ RA+ V ER+ ++L +
Sbjct: 468 FDSESLRPTYRLLVGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIE 522
Query: 553 SLMEERRKLESQARTA 568
+L + +R+++ + R A
Sbjct: 523 NLEDTQREIDLEKRRA 538
>gi|375307738|ref|ZP_09773025.1| MutS2 protein [Paenibacillus sp. Aloe-11]
gi|375080069|gb|EHS58290.1| MutS2 protein [Paenibacillus sp. Aloe-11]
Length = 788
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 290/570 (50%), Gaps = 71/570 (12%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +K+L T A A ++ P + + DI + A G L+P E+ +R T++A
Sbjct: 40 LEHIKKMLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLNPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ + SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVYVA--------SLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V +R +H
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEVTE-EDQRVEHM 521
Query: 547 KSELYQSLM---EERRKLESQARTAASLHA 573
+ L Q+ + +ER K E R +L +
Sbjct: 522 IASLEQNRLTAEQEREKAEQLRREMEALRS 551
>gi|354559953|ref|ZP_08979193.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
gi|353539467|gb|EHC08953.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
Length = 792
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 292/576 (50%), Gaps = 72/576 (12%)
Query: 2 GHAVVQKAQ------IPFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSA 54
GH ++ +A+ P+ ++ Q L +T A+++ PL + ++I +L
Sbjct: 22 GHCLLPRAREIAEALRPYNNQ-DQVQNALAETGEGKALLRVNPLFSVRGAKEIRPLLERC 80
Query: 55 VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEE 114
+ G LSP E+ +R TL+A + + L E +++ LQ E++ + +E+
Sbjct: 81 LRGGTLSPEELLHIRDTLKAARQIKQSLLEG-KMETPHLQ------EIVLGIDPPKGIED 133
Query: 115 KIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
+I CI + + D+AS L R ++R + L+ +++ A Q + P+
Sbjct: 134 EISRCI-SEEGSVADQASPQLGEFRRSITRLQQRIRDTLEGIVRNSAYQKI----LQDPI 188
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
IT+R R V +K ++ GI + S+SGAT ++EP V N + E E
Sbjct: 189 ITQRSDRYVVPVKQEYRQAF-SGIVHDQSASGATLYIEPMAVVNLGNELREVILKEQREV 247
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
IL L+A++ I + + ++D A++ ++ M+ P LS Q + +
Sbjct: 248 QRILLQLSAQVEGEAERIADAHEALAQVDFILAKSHLSESMNSGAPELSDQQEIKLVQA- 306
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+HPLL GS VP++I++
Sbjct: 307 -----RHPLLSGSV------------------------------------VPLNIELGKR 325
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
+VITGPNTGGKT +++T+GL S M+++GL++PA+ + RL F I DIGD QS+EQ
Sbjct: 326 FDTIVITGPNTGGKTVALRTVGLLSAMAQSGLHIPAEANSRLGIFTQIFVDIGDEQSVEQ 385
Query: 411 NLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
+LSTFSGH+ IVDI+ SL+L+DEIG+GTDP+EG ALA SI+ L +R + T
Sbjct: 386 SLSTFSGHMKNIVDIVLGADSHSLILLDEIGAGTDPTEGAALAMSIITELHERGCRIIAT 445
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
THY L R ENA+ EF +ETLRPTYR+L G G SNA IA +G + +++R
Sbjct: 446 THYGALKSFAYNTPRVENASVEFDVETLRPTYRLLIGIPGKSNAFYIASRLGLNDTVLER 505
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
A+ V ER+ + ++L +L + +R +E + R
Sbjct: 506 AKSFV----TEREM-QVADLIDNLEDTQRDIEREKR 536
>gi|251795420|ref|YP_003010151.1| MutS2 family protein [Paenibacillus sp. JDR-2]
gi|247543046|gb|ACT00065.1| MutS2 family protein [Paenibacillus sp. JDR-2]
Length = 789
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 275/537 (51%), Gaps = 67/537 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI+ L+ A G L+P+E+ + T R V K + D+L P+ L +
Sbjct: 70 DISASLHRARIGGTLNPAELLDIAATARGARRVKKHI--------DNLHEDDPIPLLFQM 121
Query: 106 CNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
L+E LE+ I CID + + +D AS +L IR R + + +S +++ Q+ +
Sbjct: 122 TEQLSEHKPLEDAIFDCIDDQAEV-MDSASPELASIR----RELRSGESRIREKLEQMIR 176
Query: 163 AGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + K L IT R R + +K ++ GI + S SGAT F+EP+ V NN
Sbjct: 177 SSSVQKMLQDSIITLRNDRYVIPVKQEYRSHF-GGIVHDQSGSGATLFIEPEAIVSMNNK 235
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
+E+ E IL LTA A+ ++ Y D + ++D A+A+A A M P +
Sbjct: 236 LRETKAAELREIEKILQKLTARAAEHVEDLLYNQDLLGKLDFAYAKARLAHEMKATLPRM 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ + + I+ +HPL+ D
Sbjct: 296 NDRGF------LKIKRGRHPLI-----------------------------------APD 314
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +GL++PA +L FD I
Sbjct: 315 KVVPLDVELGNQFTAIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPADEGSQLCVFDSI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA +IL+
Sbjct: 375 YADIGDEQSIEQSLSTFSSHMTNIIRILGSMTSKSLVLLDELGAGTDPAEGSALAIAILE 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
++ + TTHY++L NA+ EF + TL PTYR+L G G SNA IA
Sbjct: 435 HIHKLDSRIIATTHYSELKAYAYNRKGVINASMEFDVATLSPTYRLLVGVPGRSNAFAIA 494
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+ +G + II A+ V + R + SL E+R ES+ TA S+ E+
Sbjct: 495 ERLGLSQAIIDHARGEV-----SEEDQRVENMIASLEEDRLSAESERNTAESMRREM 546
>gi|242039141|ref|XP_002466965.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
gi|241920819|gb|EER93963.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
Length = 831
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 304/596 (51%), Gaps = 69/596 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E+SQ+LL +T AA+ ++ + +D S ++ +A ++ G ++ E AV
Sbjct: 85 SYEQSQRLLQETEAAVWLLDNAGGAMDFSGLDTVAIESAIHCVSGGAVIKGLEAMAVASL 144
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A +LD S R + L E + + L + I ID + D A
Sbjct: 145 MLFVESLQVNIKAAIKLDEGSRSRLTTLTETILDAVINKSLVKSIQDIIDDDG-SVKDTA 203
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S +L R + +R L L+ K+ + + I R C+ + +
Sbjct: 204 SPELRRYRDQVQRLESRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTTDNSSIF- 260
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
DG+ L+ S SGA +EP A+ N+ E++ S + +A+ E +LS LT +I I+
Sbjct: 261 DGLLLS-SGSGAGSMIEPIAAIPLND-ELQESRALVAKAELDVLSKLTDKILLDLDSIQN 318
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
L+ +++D ARA ++ DG P L V+ + ++E I
Sbjct: 319 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATCGSVEQISSAQLPKKAWK 378
Query: 297 -------HPLLL-------GSSLRSLSAASSN------------SNPLKSDVENSEMTVG 330
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 379 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEDQLASDLDSMKLRVS 438
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
L K D PVP+D V ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A
Sbjct: 439 QLEK---DQPVPVDFMVAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPV 495
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I + ESLVL+DE+G+GT+P EG
Sbjct: 496 KIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEGA 555
Query: 451 ALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
AL S+L+ D L + TTH+ +L LK + FENA EF E L+PT++ILWG
Sbjct: 556 ALGMSLLESFADAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGIP 615
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQHRKSELY 551
G SNA+NIA+ +G I++ ++ L +ER + E QQH + Y
Sbjct: 616 GRSNAINIAERLGLPLDIVESSRHLLGTAGAEINALIMDMERFKQEYQQHLQEAQY 671
>gi|320529025|ref|ZP_08030117.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
gi|320138655|gb|EFW30545.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
Length = 785
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 291/583 (49%), Gaps = 76/583 (13%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A++++Q Q I D+ L A G +L E+ + T++ + NV K
Sbjct: 45 RLHAETAEAVSVLQMQSPPFGGIYDLRRTLQKATLGSILEVEELREIMSTMQGMRNV-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AEL L+ S +E+L LE+ + ID + D AS +L + E
Sbjct: 104 FFRDAELSLPLLKEKSVRIEILGM------LEKHLQNTID-EHGNFRDDASPELRRVTRE 156
Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E L ++L A Q FQ + ++T R R + +K ++ P G+
Sbjct: 157 MLSAQNRVKERLSAILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN ++ + E IL L+ EIA++ + +
Sbjct: 211 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSENCTILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+IDL FARAG ++ M+ P + +V + +HPLL
Sbjct: 271 DIDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P D VPIDI++ + V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------KDHVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV IL+ + LVL
Sbjct: 350 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSDDLVL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++L R + TTHYA L NA+ EF
Sbjct: 410 LDEVGAGTDPGEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTG 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE------RQQHRKS 548
TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ + + +R E Q+ R
Sbjct: 470 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYIDEDHVRFETVVNELEQEKRVY 529
Query: 549 ELYQSLMEERRK----LESQARTAAS----LHAEIMDLYREDS 583
E Q+ + R + +E Q RT H E++ RE++
Sbjct: 530 ETRQTELRTRAQKISAMEEQLRTERDKFIRAHRELLHKAREEA 572
>gi|312143799|ref|YP_003995245.1| MutS2 family protein [Halanaerobium hydrogeniformans]
gi|311904450|gb|ADQ14891.1| MutS2 family protein [Halanaerobium hydrogeniformans]
Length = 790
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 273/541 (50%), Gaps = 63/541 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL T+ + + L I DI L A G +LS +I +R TLR + + K
Sbjct: 45 EKLAEVTALKTMITEFGKLPFGGIRDIRESLKKAEKGSVLSTDKINDIRNTLRGIKEIDK 104
Query: 81 KLTEAA-ELDGDSLQR-YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
+ ELD ++R Y L E+ +L +I CI+ I D AS L+ +
Sbjct: 105 YFVKIKDELDPRIIEREYQLLYEITAELLPREKLAREIDRCIN-DYGEIADDASSKLKSL 163
Query: 139 RAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
RA + ++EN LDS++K Q + + ++TKR +R V +K H+ DG
Sbjct: 164 RA-KIDSIENGIRDKLDSIIKSSKYQDM----LQESIVTKRENRYVVPVKQEHRNKF-DG 217
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I S+SG T FMEP V NN + E AE IL +L+++IA+ IK +
Sbjct: 218 IIHGQSASGLTLFMEPMAVVRLNNQLREVRAQESAEIQRILQVLSSKIAEQAEIIKKDLK 277
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ +D+ A A F+ D P ++ + I+++ +HPLL
Sbjct: 278 IISHLDVISASARFSLDHDCNAP------DINQEGLIDLKEARHPLL------------- 318
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+ PVPID+++ + +VITGPNTGGKT S+KT+GL
Sbjct: 319 -----------------------KEEPVPIDVQLGDQISTLVITGPNTGGKTVSLKTVGL 355
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM++ G+++PAK + + F + ADIGD QS+EQ+LSTFS H+++I + L +
Sbjct: 356 LTLMAQTGMHIPAKANSTIAVFKKVFADIGDEQSIEQSLSTFSSHMTKIKEFLAESDSNT 415
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+G GTDP EG AL SIL+ L+ + + + TTHY+ L ENA+ EF
Sbjct: 416 LVLMDELGVGTDPEEGAALGISILEELQQKGAVTIATTHYSQLKSYAYGADNVENASVEF 475
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHR 546
+E+LRPTY ++ G G SNA IA +G II+RA+ L VE + E Q R
Sbjct: 476 DIESLRPTYNLIMGVPGGSNAFEIALRLGIPEGIIKRARSLLTEEEIKVEDIINELNQER 535
Query: 547 K 547
K
Sbjct: 536 K 536
>gi|302391195|ref|YP_003827015.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
gi|302203272|gb|ADL11950.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
Length = 801
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 284/568 (50%), Gaps = 88/568 (15%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT--EAAELDGDSLQRYSP 98
L I+D+ L L+ E+ + TL N+ + L E E + S+ +Y
Sbjct: 66 LGGIKDVRDSLKRTSKEITLNGEELVEIADTLSTSRNLKRYLLNLEDEEDEYKSVVKYGT 125
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
L+ NF LE KI +D + +LD AS L IR +R + L+S+L
Sbjct: 126 QLD-----NF-KPLERKINKAVDNQG-NVLDTASTKLRNIRRSITDYSQRIKDKLNSILS 178
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q + I L+T R R + IK+ + + GI + S+S T F+EP V+
Sbjct: 179 SKKYQSY----IQDSLVTIRDKRYVIPIKSQFQEKVS-GIVHDQSASKQTVFIEPMAVVK 233
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
NN E E IL+ LT E+ + IK + + +D FA+A ++ ++G
Sbjct: 234 LNNKLRSFMAEEEEEVYRILTELTYEVREELDRIKETLKLLAWLDFTFAKAEYSFKIEGA 293
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P+L+ + + IN+E +HPL+ P
Sbjct: 294 EPVLNQEEY------INLEKARHPLI----------------P----------------- 314
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
D VPIDIK+ + +VITGPNTGGKT ++KT+GL +LM+++GL++PA + ++
Sbjct: 315 --QDEVVPIDIKLGGKFDTLVITGPNTGGKTVTLKTVGLLTLMAQSGLHIPALSGSKIAV 372
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD I DIGD QS+EQNLSTFS H++RI+DILE +LVL+DEIG+GTDP+EG ALA
Sbjct: 373 FDEIHGDIGDEQSIEQNLSTFSSHMTRIIDILETAQENNLVLLDEIGAGTDPTEGAALAM 432
Query: 455 SILQ--YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
+IL+ Y R R+ + TTHY+ L + +NA+ EF +ETL+PTYR+ G G S
Sbjct: 433 AILEELYSRGRIN-TIATTHYSQLKTFAYQQEGIQNASVEFDVETLQPTYRLQMGMPGRS 491
Query: 513 NALNIAKSIGFDRKIIQRA----------------------QKLVERLRPERQQHRKS-- 548
NA IA +G ++I++A Q +VE R++ +K+
Sbjct: 492 NAFEIAGRLGLPTEVIEKARAKLSEEDIEVDRIIQSIEESKQSIVENEEAARKERKKAKE 551
Query: 549 --ELYQSLMEERRKLESQARTAASLHAE 574
E Y++ +EE KLE + + A AE
Sbjct: 552 LKEEYETKLEEVEKLEQKIKKDAYAEAE 579
>gi|255658182|ref|ZP_05403591.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
gi|260849490|gb|EEX69497.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
Length = 794
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 266/524 (50%), Gaps = 58/524 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E + L +T+ A+ ++++ I DI +L A G +L EI TL A+
Sbjct: 40 FDEVAEWLAETTEAVTVLETAMPPFGGIFDIRPLLKKAKMGAVLDLDEIMNTMSTLAAMR 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+V K+ ELD +L+ ++ +E+L +LE + +D + D AS +L
Sbjct: 100 SV-KRFFRDIELDVPTLKEWARSIEIL------GQLERLLDNTVDEHGAMRED-ASVELR 151
Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR E + E + S+L Q F ++T R R + +K ++ P
Sbjct: 152 RIRRELHAAQAHIKERISSILHNAEYQKF----FQDAIVTVRDERYVIPVKQEYRSRFP- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S++GAT F+EP VE NN +L+ +E E IL LTAEI+K ++
Sbjct: 207 GIVHDQSATGATLFIEPMAVVELNNDVKQLTLAEQQEIQRILRHLTAEISKQSAILQENC 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ ID AFA+A A+ M P LS + + +HP +
Sbjct: 267 RILGAIDFAFAKAKLAKDMAANRPELSREGRTDLKQA------RHPFI------------ 308
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
D VPIDI++ + R+++ITGPNTGGKT SMKTLG
Sbjct: 309 -----------------------AKDKVVPIDIRIGEDYRMLLITGPNTGGKTVSMKTLG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L++++G YLP P + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V +
Sbjct: 346 TMVLLAQSGCYLPTAPDPVIAVYPNIYADIGDEQSIEQSLSTFSAHMTHIVRILQEVEED 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
LVL+DE+G+GTDP EG ALA +IL+ L + TTHY++L ENA E
Sbjct: 406 DLVLLDELGAGTDPEEGAALAMAILEKLLQLRVTTIATTHYSELKTFAYSREGIENACVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
F ++TLRPTYR+L G G SNA I++ +G +I RAQ+LV+
Sbjct: 466 FDVKTLRPTYRLLIGMPGASNAFAISRRLGLSESLILRAQQLVK 509
>gi|387819388|ref|YP_005679735.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
gi|322807432|emb|CBZ05006.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
Length = 788
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 293/563 (52%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +++N + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL ++L E+ K + AR A +L
Sbjct: 518 ELIENLQEKSIKAQEDARLAENL 540
>gi|168704433|ref|ZP_02736710.1| recombination and DNA strand exchange inhibitor protein [Gemmata
obscuriglobus UQM 2246]
Length = 646
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 302/615 (49%), Gaps = 72/615 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L + AL + Q+ P + + D+ + A G +L+ ++ V L +++
Sbjct: 48 QLTTEMVEALGLNQAPPF--AGLHDVRLVARRAQIGTMLTAEQLIEVAEALNCTGAMYRY 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AE S +++ L L + + IG CID + + LD AS DL +R
Sbjct: 106 RMRLAE-------HLSGIIDHLSGIEDLGTVGKSIGGCIDGRGHV-LDMASRDLAAVR-- 155
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP---------D 192
+ L L +KV A+I + + P + K S + H Y+LP +
Sbjct: 156 -----QKLFDLDEKVKAEIRRL--LRDPELRKILSYPNATVHGDH-YVLPVSVNHRHKVN 207
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ VS +G T F+EP + V+L E E +L L++E+ K + + Y +
Sbjct: 208 GVVHRVSGTGETVFIEPASIANLSAERVQLKADEDREVKRVLRRLSSEVGKVSKPLIYSL 267
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + ++DL ARA +A+ + P ++++ + + +HPLL A
Sbjct: 268 EVIAKLDLITARARYARDFNMWPPDVNTEGKLWLRQA------RHPLL---------EAM 312
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
++P+ + SK + VPIDI++ ++VITGPNTGGKT ++KT G
Sbjct: 313 FRNDPVAEAPPPGSGSSAPSSKLKTRSVVPIDIRLGIGFNLLVITGPNTGGKTVTLKTTG 372
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM++ G+++PA +P F ILADIGD QSLEQ+LSTFS HI+RI I ++
Sbjct: 373 LLCLMAQCGMHIPAGEGSLVPVFRHILADIGDEQSLEQSLSTFSSHITRISSIFQVADEH 432
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SL+L+DE+G+GTDP+EG AL +IL L G A+VTTH DL + R EN A E
Sbjct: 433 SLILLDELGAGTDPTEGAALGRAILDQLDSVRGRAIVTTHLGDLKTYAFNNDRAENGAVE 492
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------------LR 539
F +ET+RPTYR+ G G SNAL IA+ + + ++++A K +++ LR
Sbjct: 493 FDIETMRPTYRLHIGQFGMSNALKIARRLKLPKDLLRKAHKYLKKRKGKSGELARLQELR 552
Query: 540 PERQQ---------HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISV 590
E +Q H + L ER L++QA A+L+ +L T ++V
Sbjct: 553 LEAEQAKVDALAARHEADREKEQLARERAALDNQAAERAALN----ELRATLKTGTVVTV 608
Query: 591 YRYQFAVTSTLSKVD 605
R F T + KVD
Sbjct: 609 QR--FGSTGKVVKVD 621
>gi|138896257|ref|YP_001126710.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus thermodenitrificans NG80-2]
gi|189030428|sp|A4IRL1.1|MUTS2_GEOTN RecName: Full=MutS2 protein
gi|134267770|gb|ABO67965.1| DNA mismatch repair protein [Geobacillus thermodenitrificans
NG80-2]
Length = 784
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 267/523 (51%), Gaps = 60/523 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
L+E L +T A A+++ + PLD + DI L A G +LSP E+ V T
Sbjct: 40 LDEVAVWLEETDEAAAVLRLRGYVPLD--GVVDIRSHLKRAAIGGVLSPIELLEVAATA- 96
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
A + K+L + + L R + + L LEE I ID + LD AS+
Sbjct: 97 AASRQMKQLIMSLHDEHGGLARLADYADELAEV---PALEEDIRRSIDDHGEV-LDTASD 152
Query: 134 DLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IRA R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 153 RLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRSA 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+ + +K
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEKQEIERILRELSAKVAEHDEPLK 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + D FA+A +A+ + P ++++ ++ F + +HPL+
Sbjct: 268 RAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFLQA------RHPLI--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D VP DI + + +VITGPNTGGKT ++K
Sbjct: 313 --------------------------DQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL ++M++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 347 TVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L NA
Sbjct: 407 DEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAK 509
>gi|451817877|ref|YP_007454078.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783856|gb|AGF54824.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 786
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 283/540 (52%), Gaps = 63/540 (11%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +V K + P+ E + KL + A ++ L + D + A G LS
Sbjct: 27 GKDLVDKLE-PYNNLYEINNKLEDTNEALEILISKGNPPLEGLADTHEGIERAKKGGTLS 85
Query: 62 PSEICAVRRTLRA---VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIG 117
P ++ + LRA + +K+ D ++R P LE L + LEE+I
Sbjct: 86 PEQLLRIGGMLRASRTMKEFFKR---------DEVERSYPRLEDLAYILVPVKTLEEEIE 136
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRR 175
I + I D+AS+ L IR R+++ +S +++ + I ++ + L T R
Sbjct: 137 RAIVSEDEIS-DKASQTLYNIR----RSLKEKNSSVREKISSIVKSNSKYLQDDLYTMRG 191
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +K+ +K +P G+ + SS+GAT+F+EP V NN L E AE ILS
Sbjct: 192 DRYVIPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILS 250
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
L++++ + + + ++E D FA+A +A ++ + PI V+ D + +I
Sbjct: 251 ELSSKVKLNGEQCLSNLKVLIEFDFIFAKAKYASALNAIKPI------VTEDGTFSILSG 304
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPL+ G D VP D+ + E ++
Sbjct: 305 RHPLIAG-----------------------------------DKVVPSDVYLGKEFTTLM 329
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KT+GL +M +GL +PA+++ + +F + ADIGD QS+EQ+LSTF
Sbjct: 330 ITGPNTGGKTVTIKTVGLLHIMGLSGLLIPARDNSSIAFFTEVFADIGDEQSIEQSLSTF 389
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H++ IV+I++ V +SLVL DE+G+GTDP+EG ALA SIL+ L++R + TTHY++
Sbjct: 390 SSHMTNIVEIMKHVDDKSLVLFDELGAGTDPTEGAALAVSILETLKNRGAKLIATTHYSE 449
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L K ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ +
Sbjct: 450 LKAYAIKTEGVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYI 509
>gi|196250214|ref|ZP_03148908.1| MutS2 family protein [Geobacillus sp. G11MC16]
gi|196210398|gb|EDY05163.1| MutS2 family protein [Geobacillus sp. G11MC16]
Length = 641
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 268/523 (51%), Gaps = 60/523 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
L+E L +T A A+++ + PLD + DI L A G +LSP E+ V T
Sbjct: 40 LDEVAVWLEETDEAAAVLRLRGYVPLD--GVVDIRSHLKRAAIGGVLSPIELLEVAATA- 96
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
A + K+L + + L R + + L + LEE I ID + LD AS+
Sbjct: 97 AASRQMKQLIMSLHDEHGGLARLADYADELAE---VPALEEDIRRSIDDHGEV-LDTASD 152
Query: 134 DLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IRA R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 153 RLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRSA 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+ + +K
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEKQEIERILRELSAKVAEHDEPLK 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + D FA+A +A+ + P ++++ ++ F + +HPL+
Sbjct: 268 RAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFLQA------RHPLI--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D VP DI + + +VITGPNTGGKT ++K
Sbjct: 313 --------------------------DQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL ++M++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 347 TVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L NA
Sbjct: 407 DEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAK 509
>gi|15615668|ref|NP_243972.1| recombination and DNA strand exchange inhibitor protein [Bacillus
halodurans C-125]
gi|20139206|sp|Q9K8A0.1|MUTS2_BACHD RecName: Full=MutS2 protein
gi|10175728|dbj|BAB06825.1| DNA mismatch repair protein [Bacillus halodurans C-125]
Length = 785
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 255/496 (51%), Gaps = 54/496 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYS 97
L I DI L A G LL SE+ V T+ R + + + E E D
Sbjct: 64 LGGIFDIKPHLKRAKIGGLLHASELLEVASTIYGGRQLKKFIETMIEEEEAD-------L 116
Query: 98 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 156
PLL E + LT+LE I CID + LD AS L +R + + N+ S L+ +
Sbjct: 117 PLLGEFARQIVPLTDLERAIKQCIDDNGHV-LDSASPTLRTLRHQIRSFEANVRSKLEGI 175
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A + ++T R R + +K ++ GI + S+SGAT F+EP+ VE N
Sbjct: 176 TRSSNTAKMLSDAIVTIRNDRYVIPVKQEYRGAF-GGIVHDQSASGATLFVEPQAVVEIN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N E E ILS L+ ++++ ++ +D + E+D ARA + + + P
Sbjct: 235 NQLREAKAKEQREIERILSELSMQVSEHVDDLFVNVDVLAELDFIMARAHYGKAIRATQP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
IL+++ ++ +HPL+ P
Sbjct: 295 ILNNRGYLLIKQG------RHPLI----------------P------------------- 313
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPIDI++ +VITGPNTGGKT ++KT+GL +LM+++GL++PA+ L F
Sbjct: 314 DDEIVPIDIELGHSYSSLVITGPNTGGKTVTLKTIGLLTLMAQSGLHVPAEEESELAVFK 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H++ IVDIL V ESLVL DE+G+GTDP+EG ALA +I
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDHESLVLFDELGAGTDPTEGAALAIAI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + R V TTHY++L NA+ EF +ETL PTYR+L G G SNA
Sbjct: 434 LDDVYRRGARIVATTHYSELKGYAYNREGVMNASVEFDVETLSPTYRLLIGVPGRSNAFA 493
Query: 517 IAKSIGFDRKIIQRAQ 532
I+K +G + KII++A+
Sbjct: 494 ISKRLGLEEKIIEQAK 509
>gi|339442882|ref|YP_004708887.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
gi|338902283|dbj|BAK47785.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
Length = 792
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 296/566 (52%), Gaps = 72/566 (12%)
Query: 26 QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR--AVNNVWKKL 82
+T+ A A +++S L S +++ + G +L+ +E+ AV R LR A + K
Sbjct: 49 ETADAFARLLKSGKLTFSGLKNPKASMKRLEIGGVLNTAELLAVSRLLRIAAKAKAYGK- 107
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E +L DSLQ EL + L E+I CI + I D AS L IR
Sbjct: 108 PEREDLPTDSLQ------ELFDRLEPVPGLAEEIDRCILAEDEIS-DDASPKLRQIRRTI 160
Query: 143 KRNMENLDSLLKKV----AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
E + S L ++ A +I+ + P++T R R C+ +KA +K +P G+ +
Sbjct: 161 NGMSERIHSALNRIVNSSAGRIY----LQDPIVTMRSGRYCLPVKAEYKAQIP-GMVHDQ 215
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET-AILSLLTAEIAKSEREIK--YLMDRV 255
SSSG T F+EP V+ NN E+R + + AEE IL+ L+++ A+ +I+ ++ R+
Sbjct: 216 SSSGNTLFIEPVSVVKLNN-ELRETYLKEAEEIDVILARLSSDTAEYSAQIQEDFITCRL 274
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
L D FA+ +AQ ++G+ P+ +++ I I +HPLL
Sbjct: 275 L--DFIFAKGRYAQAINGMAPVFNTEG------IIRIRRGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K VPID+ + + V+V+TGPNTGGKT S+KT+GL +
Sbjct: 312 DPKKV--------------------VPIDVSLGEDYHVLVVTGPNTGGKTVSLKTVGLLT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM +AG+++PA + +L FD + ADIGD QS+EQ+LSTFS HI+ +V I ++ SLV
Sbjct: 352 LMGQAGMHIPAADRSQLAVFDEVFADIGDEQSIEQSLSTFSSHITNMVSIFRQMNPNSLV 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+ +GTDP+EG ALA SIL LR R + TTHY+++ ENA+ EF +
Sbjct: 412 LFDELCAGTDPNEGAALAISILDDLRSRGIRTMATTHYSEMKIYALSTEGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETL PTYR++ G G SNA I++ +G +I A+ +RL E + ++ L
Sbjct: 472 ETLSPTYRLVTGVPGKSNAFAISQRLGLPESLIDGAR---QRLSQEAESF--EDVIADLE 526
Query: 556 EERRKLESQARTAASLHAEIMDLYRE 581
+ R +E + + A EI + E
Sbjct: 527 QSRHTIEQEQQQIARYKTEIETMKEE 552
>gi|410456530|ref|ZP_11310390.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
gi|409927914|gb|EKN65039.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
Length = 785
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 296/584 (50%), Gaps = 73/584 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE +L +T A +++ + + LS DI + +V G +LSP E+ + T+ A
Sbjct: 40 FEEVVRLQTETDEAATVLRIKGNVPLSGTHDIRAHIKRSVIGGVLSPHELNQIASTIHAS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ K+ E + L S L+E ++ LT+LE++I ID + +LD AS+ L
Sbjct: 100 RQM-KRFIEDIAAERTEL---SILMEQVERIIPLTDLEQEIKHAID-ESGEVLDSASDLL 154
Query: 136 ELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R + + N E L+S+++ A + I +T R R + +K ++
Sbjct: 155 RTLRHQLRSNESRVREKLESMIRSSNASKMLSDAI----VTIRNDRFVIPVKQEYRGHY- 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SG T F+EP+ V+ NN + E E IL+ L+A +A+ E E+K +
Sbjct: 210 GGIIHDQSASGQTLFIEPQVIVQLNNQLQDIRVKEQLEIDRILTELSANVAEYENELKVI 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ + +D FA+A F + + P+++++ +S + +HPL+
Sbjct: 270 VEILANLDFIFAKARFGKKIKASKPLMNNEGRISLYKA------RHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
P+ V N DI + E +VITGPNTGGKT ++KTL
Sbjct: 313 -----PIDEVVAN-------------------DIMLGNEFTTIVITGPNTGGKTVTLKTL 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL SLM++AGL +PA + L FD + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 349 GLCSLMAQAGLQVPALDGSELAVFDAVYADIGDEQSIEQSLSTFSSHMVNIVDILNSVDF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA+
Sbjct: 409 NSLVLFDELGAGTDPQEGAALAISILDEVHKRGARVIATTHYPELKAYGYNREGVLNASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-----------KLVERLRP 540
EF +ETL PTY++L G G SNA I+K +G +IQ A+ K++ L
Sbjct: 469 EFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDWVIQAARSHVSEDTNQIDKMIASLES 528
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY-REDS 583
++Q + + ME R L+ + L ++++ Y ++DS
Sbjct: 529 SKRQAEEEQ-----MEARDYLKQAEKLHLDLQKQMIEFYEKKDS 567
>gi|310828853|ref|YP_003961210.1| MutS2 family protein [Eubacterium limosum KIST612]
gi|308740587|gb|ADO38247.1| MutS2 family protein [Eubacterium limosum KIST612]
Length = 789
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 191/588 (32%), Positives = 304/588 (51%), Gaps = 70/588 (11%)
Query: 2 GHAVVQKAQ------IPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNS 53
GH V + A+ +P+ +++ E ++ L TS AL MM +P LS I++ + ++
Sbjct: 20 GHCVSEGAKERASSLVPY-ETVYEVERALGVTSEALNMMLRNGRP-PLSEIKNTSDYVHR 77
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELE 113
A G +LS E+ AV LR V ++ +L+ +L + L LL C ELE
Sbjct: 78 ASIGAMLSMKELLAVASLLRIVKDMENYYCNDTQLE--TLDQLKNLFTLLAPCE---ELE 132
Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
++I I + + D AS +L IR E + L + + + + +IT
Sbjct: 133 KEISHKILSEGEMA-DNASRELSRIRREINFKNTRISDKLNGIISASQNEKYLQERIITI 191
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R +R V +K ++ +P GI L+ S+SGAT ++EP VE NN L+ E E I
Sbjct: 192 RNNRYVVPVKQEYRGQIP-GIVLDRSASGATLYIEPLAVVELNNDLKVLAAEEEKEIIRI 250
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L L+ ++A + E+ + ++E+D FA+ + + GV +HVS + I+
Sbjct: 251 LKDLSEKVANYKEEVIEDYNLLVELDFQFAKGKYGLAVGGVL------THVSEEGKIHFI 304
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+HPL+ + ++ V S DI ++ +
Sbjct: 305 KGRHPLI-----------------------DPKVVVAS------------DIYMDEDINT 329
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
++ITGPNTGGKT ++KT+GL +LM ++GL++P + + I ADIGD QS+EQ+LS
Sbjct: 330 MIITGPNTGGKTVTLKTIGLLNLMVQSGLFVPVREGSATRVYKNIYADIGDEQSIEQSLS 389
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H++ IVDI++ ++LVL DE+G+GTDP+EG ALA SIL L +R +V TTHY
Sbjct: 390 TFSSHMTNIVDIMKNADADALVLFDELGAGTDPTEGAALAISILNTLHERGVTSVSTTHY 449
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
++L NA+ EF + TLRPT+++L G G SNA IA+ +G II+ ++K
Sbjct: 450 SELKEYALVTRGVVNASVEFDVATLRPTFKLLIGVPGKSNAFEIARRLGLSEDIIEASKK 509
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
L+ E + R E + E+R+K E++ H EI+ L R+
Sbjct: 510 LI-----ENEAIRFEETLIKIEEKRKKTEAE-------HEEILRLRRQ 545
>gi|145351670|ref|XP_001420191.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580424|gb|ABO98484.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 502
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 234/429 (54%), Gaps = 45/429 (10%)
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
E+ E I C+ +LD ASE L IR E++R E L ++L + ++ + ++
Sbjct: 6 EVVEAIERCVSVPGGEVLDAASETLRAIRVEQRRIREELRTMLNATSKEMARKNFAERAQ 65
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
I R R C+ +K LP G+ L+VS +G T F EP+ AV NN LS SE AE
Sbjct: 66 IVTRLGRQCIPMKLGSAGELP-GVVLDVSGTGNTVFKEPQIAVPLNNALATLSASEDAEI 124
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL LT+ I ++ ++ + L E+D+A ARA A+W DG P + V +
Sbjct: 125 ERILVELTS-IVQTHADVLLDANEALTELDVANARARHAEWFDGAEPTI-----VDANQG 178
Query: 290 INIEGIKHPLL----LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ + ++HPL G+ +R D VPID
Sbjct: 179 MCVRELQHPLFRHWRRGTDVR-------------------------------DVVVPIDF 207
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
V+ + V ITGPNTGGKTAS+K +G+A LM++AGLYLP ++ +P+F ++AD+GD
Sbjct: 208 NVDSSIKCVTITGPNTGGKTASLKAIGVACLMARAGLYLPCESGCEIPFFRHVIADLGDS 267
Query: 406 QSLEQN--LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
Q+LE + LSTF H+ + IL+ + ++LVL+DE GSGTDP+EG +LA ++L L
Sbjct: 268 QTLELDGGLSTFGAHLKGLQRILDAATDDTLVLLDEPGSGTDPAEGASLAVAVLNKLSRT 327
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
L + T+HY ++ + AA EF L++L+PTYR+LWG TG SNAL+IA +G
Sbjct: 328 SRLTIATSHYEEVKEATLASDTAQVAAVEFDLQSLQPTYRLLWGETGKSNALHIAAGLGL 387
Query: 524 DRKIIQRAQ 532
+ I+ A+
Sbjct: 388 EPWILAEAR 396
>gi|295107995|emb|CBL21948.1| MutS2 family protein [Ruminococcus obeum A2-162]
Length = 793
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 282/577 (48%), Gaps = 77/577 (13%)
Query: 17 LEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV------R 69
LEE + + QT AL + Q + +++DI G L G L EI A+
Sbjct: 40 LEEIRLMQIQTKDALTRLFQKGSVSFGSVKDIRGSLKRLEIGSSLGIQEILAICALLENT 99
Query: 70 RTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
++A + + LDG D+L +PL ++ C L+E E
Sbjct: 100 SRVKAYSRKERNDLPVDSLDGMFDALSPLTPLSAEIRRC-ILSEDE-------------F 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRMCVGIKA 184
D AS L IR RNM+ + + + G + +IT R R C+ +KA
Sbjct: 146 SDDASPALRQIR----RNMKITNDRIHTQLTSLVNGGVRTYLQDSVITMRNGRYCIPVKA 201
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+G+T F+EP V+ NN L E E IL+ L+ +IA
Sbjct: 202 EYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILADLSQQIALE 260
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ I + ++++D FARA A M+ PI + + IN++ +HPL+
Sbjct: 261 QETISLNLKIMVQLDFIFARAALAMDMNASEPIFNDEGR------INLKKARHPLINKKK 314
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+ VPIDI++ ++VITGPNTGGK
Sbjct: 315 V-----------------------------------VPIDIRLGDTFDLLVITGPNTGGK 339
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KT+GL +LM ++GL++P + L F + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 340 TVSLKTVGLLTLMGQSGLHIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVS 399
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
L+ R SLVL DE+ SGTDP+EG ALA SIL YL +R + TTHY++L +
Sbjct: 400 FLDKADRHSLVLFDELCSGTDPTEGAALAISILSYLHERGIRTMATTHYSELKVFALSAS 459
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA EF +ETL PTYR+L G G SNA I+ +G + II++A+ E+L Q
Sbjct: 460 GVENACCEFDVETLSPTYRLLIGIPGKSNAFAISSKLGIPQSIIEKAK---EQLN--EQD 514
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
++ SL E R +E++ A EI L ++
Sbjct: 515 ESFEDVLTSLEESRVTIENERTEIAQYKQEIETLKKQ 551
>gi|334127861|ref|ZP_08501763.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333388582|gb|EGK59756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 784
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 261/513 (50%), Gaps = 54/513 (10%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A+ ++Q Q I D+ I+ A G +L E+ +V T+ + NV K
Sbjct: 45 RLHQETAEAVQVLQMQTPPFGGIYDLRQIMKKASMGSVLEVDELRSVMSTMAGMRNV-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNC--NFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
++D L+ + LE+L + ++E F D L R + +L+ +
Sbjct: 104 FFRDLDIDVSILKEQARPLEILGMVERHLKDAIDEHGNFRDDASPE--LRRITRELQTAQ 161
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
A R + L ++L A Q + + ++T R R + +K ++ P G+ + S
Sbjct: 162 A---RAKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIHDQS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT F+EP VE NN ++ + E IL LTAEIA++ R ++ + ID
Sbjct: 214 ASGATLFVEPLATVELNNTVRQMELARTQEIQRILRKLTAEIAQNARILEENCAILSTID 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
L FARA A+ M+ P L+ V + +HPLL P
Sbjct: 274 LIFARARLAREMEAYPPTLNRNGRVHLKRA------RHPLL----------------P-- 309
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
D VPIDI++ V++ITGPNTGGKT SMKTLGL +L+++
Sbjct: 310 -----------------RDKVVPIDIELGKSFSVLLITGPNTGGKTVSMKTLGLLALLAQ 352
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
G +LP +P + I ADIGD QS+EQ+LSTFS H IV I++ + L+L+DE
Sbjct: 353 TGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAEQGDLILLDE 412
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP EG ALA SI+++ R V TTHYA L T ENA+ EF L+TLR
Sbjct: 413 VGAGTDPDEGAALARSIIEHFLRRNICTVATTHYAALKTFAYTQTGVENASVEFDLKTLR 472
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
PTYR+L G G SNA +I++ +G I+ RA+
Sbjct: 473 PTYRLLIGIPGASNAFSISRQLGLSPDIVARAE 505
>gi|326791035|ref|YP_004308856.1| MutS2 protein [Clostridium lentocellum DSM 5427]
gi|326541799|gb|ADZ83658.1| MutS2 protein [Clostridium lentocellum DSM 5427]
Length = 797
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 267/529 (50%), Gaps = 62/529 (11%)
Query: 17 LEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE + L +T+ A+ + ++ + L T++ + IL G +LS E+ A+R LR
Sbjct: 40 LEEVKTLQKETAEAIHISIKQGKMPLGTLKAVKPILKHIDIGAILSAGELLAIRDVLRLT 99
Query: 76 ---NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
N ++ E+ Y + + T LE +I CI I D+ +
Sbjct: 100 RQGKNYYQDAIATGEV-------YPSIGGYFEGLTPFTTLEREISRCI-----IAADQFA 147
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKY 188
+D A ++ M++L +K+V + + I P++T R+ R C+ IK +K
Sbjct: 148 DDATPELAHIRKQMKSLGVKIKEVLQNMIHSSHYQDMIQDPVVTLRQDRYCIPIKIEYKS 207
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SS+GAT F+EP VE N L E E +L LT +IA EI
Sbjct: 208 QF-KGIVHDQSSTGATVFIEPMAVVELGNALKSLEVKEQEEIEKLLIELTNQIAPITEEI 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + +D FAR+ F+ D P L++Q ++ + +HPLL S+
Sbjct: 267 GRNYELLTLLDSIFARSEFSLRYDCREPRLNNQGYIFLKKA------RHPLLAKESV--- 317
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPIDI V + ++ITGPNTGGKT ++
Sbjct: 318 --------------------------------VPIDIYVGKDFTTLLITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL SLM+ GL +PA + F+ I AD+GD QS+EQ+LSTFS H++ IV IL+
Sbjct: 346 KTIGLFSLMAAIGLQIPAAEGSEMAIFEGIYADLGDEQSIEQSLSTFSAHMTNIVSILKD 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+S SLVL+DE+GSGTDP EG ALA +IL++LR + V TTHY++L EN
Sbjct: 406 MSLNSLVLLDEVGSGTDPVEGAALAMAILEHLRKQQIRTVATTHYSELKLYALSTDGVEN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
A+ EF +E+LRPTYR+L G G SNA I+ +G +I A+ +++
Sbjct: 466 ASCEFDVESLRPTYRLLIGVPGKSNAFAISMKLGLPEYLIDEAKVYLQK 514
>gi|167772055|ref|ZP_02444108.1| hypothetical protein ANACOL_03429 [Anaerotruncus colihominis DSM
17241]
gi|167665853|gb|EDS09983.1| MutS2 family protein [Anaerotruncus colihominis DSM 17241]
Length = 793
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 270/534 (50%), Gaps = 68/534 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSP 98
+ + + + L A G LSP E+ V R LRA+ + W+ ++L+GD
Sbjct: 64 IGGVTNCSAALKRAAVGARLSPRELLDVARVLRAIETIERWR-----SQLEGDPTS---- 114
Query: 99 LLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLL 153
LE L +C L L+ I I + I D AS L IR+ + E LD L+
Sbjct: 115 -LEFLLDCVVALPSLQRAISTAIVTEDEIA-DAASPALGDIRRKIRSAGAKAREVLDRLV 172
Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
+ Q + + + +IT+R R V ++ ++ + G+ + S SGAT F+EP G V
Sbjct: 173 RSATYQKY----LQENIITQRDGRFVVPVRQEYRNEI-KGLVHDTSGSGATVFIEPMGVV 227
Query: 214 EFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
E NN E+R L E AE IL L+A++ I + ++E+DL FA++ A M
Sbjct: 228 EANN-EIRILQGQEQAEIDRILRELSAQVGACADSIGGSYEAIVELDLYFAKSRLADEMR 286
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P +S + +HPLL P
Sbjct: 287 ATEPAISETGAAELKRA------RHPLL----------------P--------------- 309
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
+D VPID+++ + +V+TGPNTGGKT ++KTLGL S M++ GL LPA + +
Sbjct: 310 ----ADRVVPIDLRLGGDFDTLVVTGPNTGGKTVAIKTLGLLSAMAQCGLMLPAADGSTV 365
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
P F+ +L DIGD QS+EQ+LSTFS H++ I+ IL+ SLVL+DE+G+GTDP EG AL
Sbjct: 366 PVFEKLLVDIGDEQSIEQSLSTFSAHMTNIIRILDEADGRSLVLLDELGAGTDPVEGAAL 425
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +I++ LR + V TTHYA++ ENA+ EF + TLRPTYR+L G G S
Sbjct: 426 AVAIIERLRAQGAKVVATTHYAEIKMYALNTPGVENASCEFDVATLRPTYRLLIGVPGRS 485
Query: 513 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQ 564
NA I + +G +I+ A+ V E LR E + + Q L R + ESQ
Sbjct: 486 NAFAICERLGLPAGVIEAARAHVSGENLRFEEVVSQLEQTRQELERARVQAESQ 539
>gi|170761509|ref|YP_001788443.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A3 str. Loch Maree]
gi|238688791|sp|B1L0S3.1|MUTS2_CLOBM RecName: Full=MutS2 protein
gi|169408498|gb|ACA56909.1| MutS2 family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 788
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 288/563 (51%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI + A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRNGIYLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +K HK
Sbjct: 151 SILYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKVEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL Q+L E+ K + AR A +L
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENL 540
>gi|304404921|ref|ZP_07386581.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
gi|304345800|gb|EFM11634.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
Length = 788
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 281/542 (51%), Gaps = 67/542 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I D+ L A G L+P+E+ + T+R+ V K + + D D + PLL +
Sbjct: 68 IVDLTASLKRARIGGTLNPAELLEIAETIRSGRRVKKHVLQLH--DDDPI----PLLHDI 121
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ L+E E+ I CID + +D+AS +L +R R + N +S +++ Q+
Sbjct: 122 --ADLLSEHKPTEDAIFACIDDNAEV-MDQASPELASVR----RELRNGESRIREKLEQM 174
Query: 161 FQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
++ + K L IT R R + +K+ ++ GI + SSSGAT F+EP+ V N
Sbjct: 175 IRSSSVQKMLQDAIITLRNDRYVIPVKSEYRSNF-GGIVHDQSSSGATMFIEPEVIVSMN 233
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L +E E +L LTA A+ ++ + + +D AFA+A A + P
Sbjct: 234 NKLRELRANEEREIEKVLQKLTAIAAEVSDDLLADAEGLGMLDFAFAKARLAHELKATLP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+++ + + +HPLL
Sbjct: 294 LMNDRGFLKLKRG------RHPLL-----------------------------------A 312
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
+D VPID+++ +++TGPNTGGKT S+KT+GL SLMS +GL++PA++ ++ FD
Sbjct: 313 ADAVVPIDVELGNSFSTIIVTGPNTGGKTVSLKTIGLLSLMSMSGLFIPAEDGSQMCVFD 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA +I
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHLTNIIRILNAMTPKSLVLLDELGAGTDPAEGSALAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L+++ + V TTHY++L NA+ EF + TL PTYR+L G G SNA
Sbjct: 433 LEHIHRKGSRIVATTHYSELKAYAYNRNGVINASMEFDVATLSPTYRLLVGVPGRSNAFA 492
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA+ +G ++II A+ V R + SL E+R E++ ++A SL E+
Sbjct: 493 IAERLGLSQQIIDHARGEV-----SEDDMRVENMIASLEEDRLSAETERQSAESLRRELE 547
Query: 577 DL 578
L
Sbjct: 548 QL 549
>gi|293376245|ref|ZP_06622488.1| putative recombination and DNA strand exchange inhibitor protein
[Turicibacter sanguinis PC909]
gi|325845166|ref|ZP_08168475.1| recombination and DNA strand exchange inhibitor protein
[Turicibacter sp. HGF1]
gi|292645137|gb|EFF63204.1| putative recombination and DNA strand exchange inhibitor protein
[Turicibacter sanguinis PC909]
gi|325488831|gb|EGC91231.1| recombination and DNA strand exchange inhibitor protein
[Turicibacter sp. HGF1]
Length = 781
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 270/522 (51%), Gaps = 56/522 (10%)
Query: 24 LNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LNQ+ AL ++ + L + DI+ + A +LS E+ AV R L AV+ +
Sbjct: 46 LNQSDEALRIIYALGEAPLGGVSDISEAIARAKISAILSSQELLAVSRLLYAVSQMKSFA 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
E+ D+ P+ N L+ L+ I CID + ++D AS +L IR
Sbjct: 106 ERLNEIKVDA-----PIFAHHTNTLVALSSLQNAINACID-ETGYVMDSASGELRSIR-- 157
Query: 142 RKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
R +++ +S +K+ Q+ + + ++T R R V ++A +K G + S
Sbjct: 158 --RAIQSTESRIKERLNQVVSERRSKLTDGIVTIRNERYVVPVRADYKNTF-GGTIHDQS 214
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG TYFMEPK V+ NN E E IL LT E+ K + ++ + EID
Sbjct: 215 SSGNTYFMEPKEVVDLNNKLQEWHVEERREIERILRELTEEVKKFVDLLSLNVELLGEID 274
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FA+ +A+ ++G P ++++ I + +HPL+ K
Sbjct: 275 FMFAKGKYARLINGTRPKINTKG------IIRLVAARHPLI----------------DQK 312
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
S V N DI++ E +VITGPNTGGKT ++KT+GL +LM++
Sbjct: 313 SVVAN-------------------DIELGDEYTTIVITGPNTGGKTVTLKTVGLLTLMAQ 353
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
AGL +PA +L FD + ADIGD QS+EQ+LSTFS H++ IV I+E ++ SL+L DE
Sbjct: 354 AGLLIPAHESSQLAIFDHVFADIGDEQSIEQSLSTFSSHMTNIVKIMERLTVNSLILFDE 413
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP EG +LA SIL Y++ R + T+HY +L + NA+ EF++ETL
Sbjct: 414 LGAGTDPKEGASLAISILNYVKVRGARTIATSHYPELKAYAYEQDDVINASVEFNVETLS 473
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
PTYR+L G G SNA I+K +G I+ +A+ VE R E
Sbjct: 474 PTYRLLVGVPGRSNAFEISKRLGLKEAILNQARSYVESERTE 515
>gi|389819500|ref|ZP_10209368.1| MutS2 protein [Planococcus antarcticus DSM 14505]
gi|388463298|gb|EIM05662.1| MutS2 protein [Planococcus antarcticus DSM 14505]
Length = 786
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 267/522 (51%), Gaps = 57/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E +LL Q +++ + + I DI A G LSP E+ V T+RA
Sbjct: 41 INEVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLHARRAQIGGSLSPMELMEVSSTIRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + ++ E + +++ + LE ++ LT LE I CID + LD AS +L
Sbjct: 100 SRILRQFFET--IKEEAVIQIPHFLEKKESMPILTVLEHAINICIDDNGGV-LDSASSEL 156
Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
IR + R E L+SL++ K A+++ + ++T R R + +K ++
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRNHY 211
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP V+ NN RL E E IL +L+A++ + E+
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDVVVQANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFL 270
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L++ + EIDL A+A + G P ++++ + IN++ +HPL+
Sbjct: 271 LVEVLGEIDLILAKAKYGAAHKGTKPTMNTEGY------INLQKARHPLI---------- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P D VP DI+ + +VITGPNTGGKT ++KT
Sbjct: 315 ------P-------------------KDEVVPNDIEFGGDITAIVITGPNTGGKTVTLKT 349
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL++LM+++GL +PA + L FD I ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 350 VGLSTLMAQSGLPVPALDGSELSVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLV+ DE+G+GTDP EG ALA S+L + R + TTHY +L NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGYNRPGVANAS 469
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTYR+L G G SNA I+K +G II A+
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIINHAK 511
>gi|254526388|ref|ZP_05138440.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
gi|221537812|gb|EEE40265.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
Length = 803
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 310/629 (49%), Gaps = 86/629 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T + + + + S + DI+ + G
Sbjct: 41 MGKRAILSFGIP--SEYELSKRLLNETVEINELENNLDKSISFSNVFDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++S +E+ + +T+ A N+ K L LD + S + L+ + N T K G
Sbjct: 99 VISSTELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNVETIF--KKG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ K I D AS +L ++R E L KK+ +I I K L
Sbjct: 152 IESNGK---ISDNASNELSILRKEL---------LSKKLERKILVEKFIQKNLAYLQDTT 199
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
I R R + +K ++ + GI + SSSG T + EP+ V N L IAEE
Sbjct: 200 IGDRNGRPVLAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARIIAEE 258
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
+L + ++ + + + +L ++ A R+ +++W+ G P +S
Sbjct: 259 FKLLKKWSQIVSDNSENLIEMSSILLRLENALTRSRYSKWIGGKTPTFEKNPIIS----- 313
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+ G HPLL+ + + PV +D +
Sbjct: 314 -LVGFSHPLLIWEHKKKGAPP----------------------------PVAVDFHINRN 344
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+
Sbjct: 345 IKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEE 404
Query: 411 NLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
NLSTFSGHISRI +IL+ ++ + S+VL+DEIGSGTDP EG ALA ++L+ ++ +
Sbjct: 405 NLSTFSGHISRIKEILDSLNNKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDIT 464
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I
Sbjct: 465 LATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENI 524
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ A LRP ++ +++ + L EER K ++ A AA L A L+ E +
Sbjct: 525 LNEA---ANYLRP-KEVDNINDIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN-- 578
Query: 588 ISVYRYQFAVTSTLSKVDFDAIPNIDQCK 616
Y YQ K++ + I I++ K
Sbjct: 579 ---YEYQ--------KINAEKIQEIERSK 596
>gi|385799733|ref|YP_005836137.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
gi|309389097|gb|ADO76977.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
Length = 791
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 268/527 (50%), Gaps = 67/527 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE-AAELDGDSLQR-YSPLLELL 103
DI L A G +LS + I VR T+RAV + + L + LD ++R Y + +L
Sbjct: 70 DIREDLKKAAKGSVLSTTAISRVRNTIRAVFELKRYLNGIKSNLDPRIIEREYQKIYDLC 129
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAA 158
+ L +I C++ + + D AS L +RA+ + ++EN LDS++K
Sbjct: 130 SDLQTTPSLAREIDRCLN-EYNEVADEASNKLRSLRAQIE-SIENSIRDKLDSIIKSKKY 187
Query: 159 Q-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q I Q ++T+R +R V +K + DGI S+SG T FMEP V NN
Sbjct: 188 QDILQEN-----IVTRRENRYVVPVKQEKRNSF-DGIVHGQSASGLTLFMEPMAVVRLNN 241
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
+ E E IL +L+++IA+SE IK + + +D A A F+ +D C
Sbjct: 242 QLREVQAKENVEIQRILQMLSSKIAQSENIIKRNLMIISNLDSLAAAAKFS--LDFDC-- 297
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+Q V+ I ++ +HPLL
Sbjct: 298 --NQPEVNESGIIELKKARHPLL------------------------------------G 319
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
+ PVPID+K+ + +VITGPNTGGKT ++KT+GL +LM++ GL++PA + + F+
Sbjct: 320 EEPVPIDLKLGNDIATLVITGPNTGGKTVALKTVGLLTLMTQTGLHIPAAANSTISIFNK 379
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
I ADIGD QS+EQ+LSTFS H+ RI L +LVL+DE+G GTDP EG AL SIL
Sbjct: 380 IFADIGDEQSIEQSLSTFSSHMHRIRKFLAESDNSTLVLMDELGVGTDPEEGAALGISIL 439
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
+ L+++ + TTHY+ L ENA+ EF L+TL+PTY+++ G G SNA I
Sbjct: 440 EKLQEKKATTIATTHYSQLKSYAYGTEEVENASVEFDLDTLKPTYKLIMGVPGGSNAFEI 499
Query: 518 AKSIGFDRKIIQRAQKL-------VERLRPERQQHRKSELYQSLMEE 557
A +G +II RA+ L VE + E Q R YQ L E
Sbjct: 500 ALRLGIPEEIIDRARSLLSEEEIKVEDIINELNQERNR--YQKLRHE 544
>gi|153940847|ref|YP_001392400.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum F str. Langeland]
gi|384463373|ref|YP_005675968.1| MutS2 family protein [Clostridium botulinum F str. 230613]
gi|189030427|sp|A7GHZ0.1|MUTS2_CLOBL RecName: Full=MutS2 protein
gi|152936743|gb|ABS42241.1| MutS2 family protein [Clostridium botulinum F str. Langeland]
gi|295320390|gb|ADG00768.1| MutS2 family protein [Clostridium botulinum F str. 230613]
Length = 788
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 278/532 (52%), Gaps = 63/532 (11%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+ DI + A G L P ++ + LR + + E + Y L +
Sbjct: 68 VYDIRNGIYLAEKGSALLPGQLLKIAAVLRCARRFKEYINHKEEEES-----YRVLENIC 122
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQ 159
+ L ++EE+I I+ + I DRAS L IR +++N + ++SL++ ++
Sbjct: 123 EGIFSLPKIEEEIFNAIEGEDEI-ADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSY 181
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ + + T R R + +KA HK +P G+ + SS+GAT F+EP V NN
Sbjct: 182 L------QENIYTVRGDRYVLPVKAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEI 234
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L E AE IL++L+A+I + +K + V E+D FA+A FA + CP ++
Sbjct: 235 KELMLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTIN 294
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
++ V IEG +HPL ++ E+
Sbjct: 295 NEGIVDI-----IEG-RHPL----------------------IDRREV------------ 314
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VPI +K+ E ++ITGPNTGGKT ++KT+GL LM+ +GL +PA+ + + +F+ +
Sbjct: 315 -VPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVF 373
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV+I++ SLVL DE+G+GTDP+EG ALA SIL+
Sbjct: 374 ADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILEN 433
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
LR R + TTHY++L + ENA+ EF +ETLRPTYR+L G G SNA I+K
Sbjct: 434 LRKRGTKIIATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISK 493
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
+G II A++ + + R EL ++L E+ K + AR A +L
Sbjct: 494 RLGLPDYIIDFARENI-----SNENIRFEELIENLQEKSIKAQEDARLAENL 540
>gi|398818390|ref|ZP_10576981.1| MutS2 family protein [Brevibacillus sp. BC25]
gi|398027832|gb|EJL21362.1| MutS2 family protein [Brevibacillus sp. BC25]
Length = 785
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 275/533 (51%), Gaps = 70/533 (13%)
Query: 11 IPFGKSLEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
IPF + L+E +Q+ Q + L + S PL I DI G + A +L+P E+
Sbjct: 35 IPFLR-LDEVITAQQGTEQAATVLRLKGSVPL--GGIRDIRGPVQRARLNAMLAPMELLD 91
Query: 68 VRRTL---RAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCK 123
+ T+ R + + E EL PLL+ + L ELE +I CID
Sbjct: 92 IASTVMAGRRLKTFLLDMCEDHEL---------PLLQQEAERIEGLRELETEIRRCIDEN 142
Query: 124 LLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMC 179
ILD AS +L +R E + L+S +++ Q+ ++ K L +T R R
Sbjct: 143 G-DILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQKMLMENIVTIRGDRFV 197
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K ++ + GI + S+SGAT F+EP+ VE NN L E E IL +LT
Sbjct: 198 IPVKQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERILYVLTE 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
+++ + + + + E+D FA+A A M +CP ++ + +V N+ +HPL
Sbjct: 257 QVSFAVEALIENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV------NMRKARHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ P + VP+D+++ E + +V+TGP
Sbjct: 311 I----------------P-------------------REVVVPVDVELGGEYQAIVVTGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT S+KT+GL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ I+ IL + +SLVL DE+G+GTDP+EG ALA SI+ ++ D V TTHY++L
Sbjct: 396 TNIIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
NA+ EF ++TLRPTYR+L G G SNA IA+ +G II A+
Sbjct: 456 AYDRPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVAR 508
>gi|218288876|ref|ZP_03493127.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240965|gb|EED08142.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
Length = 776
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 271/527 (51%), Gaps = 52/527 (9%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
A +PF + + +L A + + + IE + ++ A G +S E +
Sbjct: 33 AMVPFAERADAEAELARLDEAVRMLYRVGAPPFAGIESLEEVVERARRGGTISADEANRL 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
R + A ++ E A GD + L + L E++I +D +I
Sbjct: 93 ARCI-AGMRAMRQFVERAGEGGD----FPLLASSVAPMADLRRTEQEIRQVVDEDGQVI- 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L +R E++R + S+L ++ QA + +P+I R C+ ++ HK
Sbjct: 147 DHASPTLLRLRDEKRRREGEIRSVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEHKS 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ +VSSSG+T F+EP+ VE + L E E +L L A +A+ +
Sbjct: 205 QIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYELAAAVAQVADDF 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ E+D FA+A +A+ +DG P L+ D + G +HP
Sbjct: 264 LRNLNVAAEMDFVFAKATYARRVDGKRPRLT-------DGVWRLHGARHP---------- 306
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
L D VPID+++ R+++ITGPNTGGKT ++
Sbjct: 307 --------KLDRDA------------------VPIDVELGERFRLLIITGPNTGGKTVTL 340
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+LE
Sbjct: 341 KTIGLLTLMGMSGLFLPTKRESEIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDMLER 400
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++ EN
Sbjct: 401 VTEDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAAEN 460
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
A+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V
Sbjct: 461 ASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHV 507
>gi|311031396|ref|ZP_07709486.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. m3-13]
Length = 785
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 278/536 (51%), Gaps = 64/536 (11%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
AQ+ + EE K QT A +++ + + L I DI G + A G L+ E+
Sbjct: 32 AQLTPATNYEEVVKRQLQTDEAATVLRLKGEVPLGGITDIRGHVKRAEIGGTLNTHELLD 91
Query: 68 VRRTLRAVNNVWKKLTEAAE--LDGD-SLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCK 123
+ T+ A +KL E LD D S+ P+L E + ELE I CID +
Sbjct: 92 IAGTIYAA----RKLDRFVESVLDEDISI----PILKEYMDQLIIYPELERNIKNCID-E 142
Query: 124 LLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+LD AS+ L IR + + R E L+S+++ AQ + I IT R R
Sbjct: 143 YGEVLDGASDKLRGIRQQLRSTESRVREKLESMIRSSNAQKMLSDAI----ITIRNERYV 198
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K ++ GI + SSSGAT F+EP+ V+ NN+ E E IL+ L+A
Sbjct: 199 IPVKQEYRSSY-GGIVHDQSSSGATLFIEPQQVVDLNNVLQEAKVKEKLEIDRILAELSA 257
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
++A+ RE+ + + EID FA+A + + + G P ++++ ++ + +HPL
Sbjct: 258 DVAEVARELLENVHILAEIDFMFAKAKYGKHIRGTKPEINNEKYIRLVQA------RHPL 311
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D VP I++ + +VITGP
Sbjct: 312 IN-----------------------------------EDEVVPNTIELGKDYTSIVITGP 336
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL ++M+++GL++PA++ + F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 337 NTGGKTVTLKTLGLLTIMAQSGLHVPAQDGSEVGVFNAVYADIGDEQSIEQSLSTFSSHM 396
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
IVDIL+ V +SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 397 VNIVDILKKVDHDSLVLFDELGAGTDPQEGAALAISILDEVYQRGACVIATTHYPELKAY 456
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+K +G ++I RA++ V
Sbjct: 457 GYNRESVVNASVEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLSMEVIDRAKEFV 512
>gi|347752968|ref|YP_004860533.1| MutS2 family protein [Bacillus coagulans 36D1]
gi|347585486|gb|AEP01753.1| MutS2 family protein [Bacillus coagulans 36D1]
Length = 784
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 194/587 (33%), Positives = 291/587 (49%), Gaps = 79/587 (13%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S EE ++ +T A +++ + + L I DI L A G L+P E+ + T+
Sbjct: 39 SYEEVVRMQEETDEAAQVLRLKGHVPLFGIYDIRRHLKRAAIGGRLNPQELVQIASTIH- 97
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V+ K+ E + L P+L ++ LT LE +I +D I LD ASE
Sbjct: 98 VSRTMKRFIEGITEEETEL----PILTSMVDRIAVLTPLEHEIRNAVDENGEI-LDSASE 152
Query: 134 DLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +R E L+ ++ K AA++ + +IT R R C+ +K ++
Sbjct: 153 TLRQIRHGLRGTERRIREKLEGYIRGKNAAKM-----LSDAIITIRNDRYCIPVKQEYRA 207
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SSSG T F+EP+ V+ NN E E ILS L+A +A + E+
Sbjct: 208 NY-GGIVHDQSSSGQTLFIEPQSVVDLNNQLREWHLKEQQEVERILSELSAAVAAAGGEL 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +++ + + D FA+A + + + G P++++ +I + +HPLL
Sbjct: 267 ETIVEILADFDFMFAKALYGRSIKGSKPVINNHG------AIRMFKARHPLL-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P +D VP DI + E +VITGPNTGGKT ++
Sbjct: 313 --------P-------------------ADKVVPNDITIGQEYTTIVITGPNTGGKTITL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 346 KTIGLCTLMAQAGLQIPALDGSEMAVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKR 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V +SLVL DE+G+GTDP EG ALA SIL + R V TTHY +L N
Sbjct: 406 VDDQSLVLFDELGAGTDPQEGAALAISILDEVYKREARVVATTHYPELKAYAYNREGVVN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV------------- 535
A+ EF +ETL PTYR+L G G SNA I++ +G II+ AQ L+
Sbjct: 466 ASVEFDVETLSPTYRLLIGVPGRSNAFEISRRLGLSPSIIEHAQSLIGADTNEVENMIAA 525
Query: 536 ---ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
R E+++ EL + E R L+ Q A+ +A +LY
Sbjct: 526 LESARREAEKERQEAQELLKDAEELHRDLQKQ---MAAFYARRDELY 569
>gi|160933325|ref|ZP_02080713.1| hypothetical protein CLOLEP_02170 [Clostridium leptum DSM 753]
gi|156867202|gb|EDO60574.1| MutS2 family protein [Clostridium leptum DSM 753]
Length = 791
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 279/548 (50%), Gaps = 70/548 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
++++A L A +G LS E+ V LR + + W+K +E E D R+ E
Sbjct: 71 LQNVANSLRRAQAGASLSMGELLKVAEVLRVMRGLIQWRKRSEGLETSID--WRF----E 124
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 157
L +L EEKI I + + D AS+ L IR A R E LD ++ A
Sbjct: 125 ALPPNKYL---EEKIASSILSEEEMA-DGASQALGDIRRKINAASLRVREKLDHMIHSPA 180
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q + + +P++T R R V +KA + +P G+ + S SGAT F+EP VE NN
Sbjct: 181 YQKY----LQEPIVTLRGGRFVVPVKAECRGEVP-GLVHDTSGSGATVFVEPMAVVEANN 235
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L + E AE IL L+ E I + +E+D+ FA+A A M P
Sbjct: 236 DIKVLKSKEEAEIERILYELSQEAGGFADSIIEGYNAAIELDILFAKAKLAYRMKATLPE 295
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
++ Q + + +HPL+ +P K +
Sbjct: 296 VNDQGKIYLKKA------RHPLI---------------DP----------------KAV- 317
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
V DI++ + +VITGPNTGGKT S+KT+GL +LM+ GL LPA + + F
Sbjct: 318 ---VATDIELGLQFDTLVITGPNTGGKTVSLKTIGLLTLMAMCGLLLPASDGSMVSVFSQ 374
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE--SLVLIDEIGSGTDPSEGVALATS 455
+LADIGD QS+EQ+LSTFS H++ ++ IL V RE SLVLIDE+G+GTDP EG ALA +
Sbjct: 375 VLADIGDEQSIEQSLSTFSAHMTNMIHILSSVEREGISLVLIDELGAGTDPVEGAALAMA 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL+ LR TTHYA+L + EN EF + TLRPTYR+L G G SNA
Sbjct: 435 ILETLRASQVRIAATTHYAELKAYALQTAGVENGCCEFDVATLRPTYRLLIGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I++ +G D+ I+ RA++LV + R ++ ++L E R+ LE + + A L A+
Sbjct: 495 AISERLGMDQHIVARARELV-----SAENSRFEDVVRNLEESRQSLEQERKEAQELSAQA 549
Query: 576 MDLYREDS 583
YR+++
Sbjct: 550 QQ-YRQEA 556
>gi|384135955|ref|YP_005518669.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290040|gb|AEJ44150.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 779
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 272/532 (51%), Gaps = 60/532 (11%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A PF + +L A + + + IE +A ++ A G LS E
Sbjct: 35 RAMEPFPVRADAEAELARLDEAVRMLYRVGAPPFAGIESLAEVVKRAQRGGTLSADEANR 94
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ R + + + + + AAE GD + L + L E++I +D ++
Sbjct: 95 LARCIAGMRAMRQFVERAAE-GGD----FPLLASTVAPMADLRRTEQEIRQVVDEDGQVV 149
Query: 128 LDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS L +R E++R LD LL+ QA + +P+I R C+ ++
Sbjct: 150 -DHASPTLLRLRDEKRRREAEIRAALDRLLRT------QAKYLQEPVIAMRGEHYCLPVR 202
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
HK +P GI +VSSSG+T F+EP+ VE + L E E +L L A +A+
Sbjct: 203 VEHKSQIP-GIVRDVSSSGSTVFIEPRTIVELSERVRELEVLEEREVERLLYQLAAAVAQ 261
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ +D E+D FA+A +A+ +DG P L+ + + G +HP L
Sbjct: 262 VADDFLRTLDVAAEVDFVFAKAAYARRVDGKRPRLT-------EGVWRLYGARHPKLHRD 314
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ VPID+++ R+++ITGPNTGG
Sbjct: 315 A------------------------------------VPIDVELGDRFRLLIITGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+
Sbjct: 339 KTVTLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRII 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
D+LE V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++
Sbjct: 399 DMLERVTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRN 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ENA+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V
Sbjct: 459 PAAENASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHV 510
>gi|170755146|ref|YP_001782757.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B1 str. Okra]
gi|429246442|ref|ZP_19209762.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
gi|229486369|sp|B1IMK5.1|MUTS2_CLOBK RecName: Full=MutS2 protein
gi|169120358|gb|ACA44194.1| MutS2 family protein [Clostridium botulinum B1 str. Okra]
gi|428756532|gb|EKX79084.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
Length = 788
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 292/563 (51%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKRSTLLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +++N + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALKKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL ++L E+ K + AR A +L
Sbjct: 518 ELIENLQEKSIKAQEDARLAENL 540
>gi|359411145|ref|ZP_09203610.1| MutS2 protein [Clostridium sp. DL-VIII]
gi|357170029|gb|EHI98203.1| MutS2 protein [Clostridium sp. DL-VIII]
Length = 786
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 188/571 (32%), Positives = 296/571 (51%), Gaps = 60/571 (10%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G ++ K + P+ E + KL A ++ L L + D + A G LS
Sbjct: 27 GKELINKLE-PYNNLYEINNKLEETNEALEILITKGNLPLEGLSDTHEGIERAKKGGTLS 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
P ++ V LRA + K+ + E++ + Y L +L + LE +I I
Sbjct: 86 PEQLLRVGGMLRA-SRTTKEFFKREEVE----KAYPRLEDLAFILVPIKTLEAEIERAIV 140
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMC 179
+ I D+AS+ L IR R ++ +S +++ + I ++ + L T R R
Sbjct: 141 SEDEIS-DKASQTLYNIR----RTLKEKNSSVREKISSIVKSNSKYLQDDLYTMRGDRYV 195
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K+ +K +P G+ + SS+GAT+F+EP V NN L E AE ILS L+
Sbjct: 196 LPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSELSQ 254
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
++ + + + ++E+D FA+A +A ++ + PI V+ D + +I +HPL
Sbjct: 255 KVKMNAEQCLSNLKVLVELDFIFAKAKYASALNAIKPI------VNEDGTFSILSGRHPL 308
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ G D VP D+ + E + ++ITGP
Sbjct: 309 IEG-----------------------------------DKVVPSDVYLGKEFQTLMITGP 333
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KT+GL +M +GL +PA+++ + F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 334 NTGGKTVTIKTVGLLHIMGLSGLLIPARDNSSIALFNEIFADIGDEQSIEQSLSTFSSHM 393
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV+I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L
Sbjct: 394 TNIVNIMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRSRGAKLIATTHYSELKAY 453
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ER 537
K ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E
Sbjct: 454 ALKTDGVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEEN 513
Query: 538 LRPE---RQQHRKSELYQSLMEERRKLESQA 565
L+ E R+ KS + + E R L+ QA
Sbjct: 514 LQFENLIRELQEKSIIAKQEAREARMLKEQA 544
>gi|258512089|ref|YP_003185523.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478815|gb|ACV59134.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 776
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 273/527 (51%), Gaps = 52/527 (9%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
A +PF + + +L A + + + IE + ++ A G +S E +
Sbjct: 33 AMVPFAERADAEAELARLDEAVRMLYRVGAPPFAGIESLEEVVQRARRGGTISADEANRL 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
R + + + + + AAE GD + L + L E++I +D +I
Sbjct: 93 ARCIAGMRAMRQFVERAAE-GGD----FPLLASSVAPMADLRRTEQEIRQVVDEDGQVI- 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L +R E++R + ++L ++ QA + +P+I R C+ ++ HK
Sbjct: 147 DHASPTLLRLRDEKRRREAEIRTVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEHKS 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ +VSSSG+T F+EP+ VE + L E E +L L A +A+ +
Sbjct: 205 QIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYQLAAAVAQVADDF 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ E+D FA+A +A+ +DG P L+ D + G +HP L +
Sbjct: 264 LRNLNVAAEMDFVFAKAAYARRVDGKRPRLT-------DGVWRLHGARHPKLHRDA---- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPID+++ R+++ITGPNTGGKT ++
Sbjct: 313 --------------------------------VPIDVELGDRFRLLIITGPNTGGKTVTL 340
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+LE
Sbjct: 341 KTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDMLER 400
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++ EN
Sbjct: 401 VTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAAEN 460
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
A+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V
Sbjct: 461 ASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHV 507
>gi|226311231|ref|YP_002771125.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
gi|254766594|sp|C0Z9F1.1|MUTS2_BREBN RecName: Full=MutS2 protein
gi|226094179|dbj|BAH42621.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
Length = 785
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 275/530 (51%), Gaps = 64/530 (12%)
Query: 11 IPFGKSLEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
IPF + L+E +Q+ Q + L + S PL I DI G + A +L+P E+
Sbjct: 35 IPFLR-LDEVINAQQGTEQAATVLRLKGSVPL--GGIRDIRGPVQRARLNAMLAPMELLD 91
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLI 126
+ T+ A + L + D L PLL+ + L ELE +I C+D
Sbjct: 92 IASTVMAGRRLKTFLLDMC--DDHEL----PLLQQQAERIEGLRELETEIRRCVDENG-D 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
ILD AS +L +R E + L+S +++ Q+ ++ K L +T R R + +
Sbjct: 145 ILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ + GI + S+SGAT F+EP+ VE NN L E E IL +LT +++
Sbjct: 201 KQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERILYVLTEQVS 259
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ + + + E+D FA+A A M +CP ++ + +V N+ +HPL+
Sbjct: 260 FAVEALVENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV------NMRKARHPLI-- 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P + VP+D+++ E + +V+TGPNTG
Sbjct: 312 --------------P-------------------REVVVPVDVELGGEYQAIVVTGPNTG 338
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ IL + +SLVL DE+G+GTDP+EG ALA SI+ ++ D V TTHY++L
Sbjct: 399 IQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYD 458
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
NA+ EF ++TLRPTYR+L G G SNA IA+ +G II A+
Sbjct: 459 RPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVAR 508
>gi|423719024|ref|ZP_17693206.1| DNA mismatch repair ATPase, mutS family [Geobacillus
thermoglucosidans TNO-09.020]
gi|383367927|gb|EID45202.1| DNA mismatch repair ATPase, mutS family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 784
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 262/516 (50%), Gaps = 57/516 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ +AAL + PL I DI L A G LSP E+ + T+ A +
Sbjct: 47 QEETDEAAAALRLRGHVPL--GGIVDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + LD ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+S+++ +AQ + +IT R R + +K ++ GI
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT +A + + +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P L+ + ++ + +HPL+ ++
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP DI++ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F I ADIGD QS+EQ+LSTFS H+ IV+IL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
TLRPTY++L G G SNA I+K +G D +II+RA+
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLDERIIERAK 509
>gi|313896601|ref|ZP_07830150.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|312974786|gb|EFR40252.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
Length = 761
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 277/549 (50%), Gaps = 67/549 (12%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A++++Q Q I D+ L A G L E+ + T++ + NV K
Sbjct: 21 RLHAETAEAVSVLQMQAPPFGGIYDLRHTLQKATLGSTLEVEELREIMSTMQGMRNV-KY 79
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
A+L L+ +E+L LE+ + ID + + D AS +L + E
Sbjct: 80 FFRDADLSLPLLKEKGVRIEILGM------LEKHLQNTID-EHGNLRDDASPELRRVTRE 132
Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E L ++L A Q FQ + ++T R R + +K ++ P G+
Sbjct: 133 MLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 186
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN ++ + E IL L+ EIA++ + +
Sbjct: 187 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADIVSENCTILA 246
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+DL FARAG ++ M+ P + +V + +HPLL
Sbjct: 247 ELDLIFARAGLSRNMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 284
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P D VPIDI++ + V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 285 P-------------------KDRVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILAL 325
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV IL+ LVL
Sbjct: 326 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSNDLVL 385
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++L R + TTHYA L NA+ EF
Sbjct: 386 LDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTS 445
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLM 555
TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ + H + E + L
Sbjct: 446 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 499
Query: 556 EERRKLESQ 564
+E+R E++
Sbjct: 500 QEKRAYETR 508
>gi|323702088|ref|ZP_08113756.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333923406|ref|YP_004496986.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532970|gb|EGB22841.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333748967|gb|AEF94074.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 783
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 271/528 (51%), Gaps = 65/528 (12%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
LS E+ AV TL A + K E + RY L EL + +LE+ I
Sbjct: 83 LSAEELLAVGETLAASRRIKKFFAEKS-------SRYPLLNELAEALTIQAQLEKNILRA 135
Query: 120 IDCKLLIILDRASEDLELIRA---ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I I D + E L++ R + R E ++S+++ Q + + P+IT R
Sbjct: 136 ILPGGEIADDASPELLQIRRGLARAQNRVRERMESIIRSSENQKY----LQDPIITIRND 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R V +K ++ +P GI + S+SGAT F+EP AVE NN RL +E E IL
Sbjct: 192 RYVVPVKQEYRNQIP-GIVHDQSASGATLFIEPMAAVEANNEVRRLMVAEQQEIQKILVE 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L+ ++ ++ MD + ++D A+A +++ ++ + P + + V +I+ +
Sbjct: 251 LSNGVSAIAEDLTITMDALGQLDFIMAKARYSRTLNALSPTIIDGARV------DIKKGR 304
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL + VP I + + R +VI
Sbjct: 305 HPLL------------------------------------GEDAVPATISLGKDFRTLVI 328
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GL +LM+++GL++PA+ + F+ + ADIGD QS+EQ+LSTFS
Sbjct: 329 TGPNTGGKTVTLKTVGLFTLMTQSGLHIPAEAGSEMGIFNQVFADIGDEQSIEQSLSTFS 388
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ IV+IL SLVL+DE+G+GTDP+EG ALA +IL+ L R + TTHY++L
Sbjct: 389 SHMTNIVNILNRADTGSLVLLDELGAGTDPTEGAALARAILEELHGRGACTIATTHYSEL 448
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA+ EF +ETLRPTYR+L G G SNA I+ +G I+QRA++ +
Sbjct: 449 KNYAYTTPGVENASVEFDVETLRPTYRLLIGRPGRSNAFEISARLGLQPAIVQRARQFL- 507
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEIMDLYRE 581
+Q + ++L L + ++ E AA L EI + YR+
Sbjct: 508 ----TTEQVQVADLINKLEQTQQAAERDREEAAILRRESEEIKERYRQ 551
>gi|134299495|ref|YP_001112991.1| MutS2 family protein [Desulfotomaculum reducens MI-1]
gi|134052195|gb|ABO50166.1| DNA mismatch repair protein, MutS family [Desulfotomaculum reducens
MI-1]
Length = 782
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 274/522 (52%), Gaps = 60/522 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
++E+ ++ +TS +++ PL +L+ DI L A +LS E+ AV TL A
Sbjct: 38 NMEDIKRWQAETSEGRELLRLDPLAELAGWHDIRQALTRASRYAVLSAEELFAVGETLAA 97
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K +E + RY L EL ++ +LE+ I + I D + E
Sbjct: 98 SRQIKKFFSEKTD-------RYPLLSELAESLTNQAQLEKNILQAVLPGGEIADDASPEL 150
Query: 135 LELIRA-ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
L++ R +R +N E ++++++ Q + + P+IT R R V +K ++ +P
Sbjct: 151 LQIRRGIQRSQNRIRERMENIIRSSDNQKY----LQDPIITIRNDRYVVPVKQEYRNQIP 206
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT F+EP VE NN +L +E E IL L+ E++ +I
Sbjct: 207 -GIVHDQSASGATLFVEPMAVVEANNEVRQLVAAEKQEIQRILGQLSQEVSGVHEDISIA 265
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + ++D A+A ++ ++ P IL+ I+I+ +HPLL G +
Sbjct: 266 LETLGDLDFIMAKARYSLKLNAWSPKILAG-------PMIDIKKGRHPLLPGDA------ 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VP I + + +VITGPNTGGKT ++KT
Sbjct: 313 ------------------------------VPATISLGKAFKTLVITGPNTGGKTVTLKT 342
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL SLM++AGL++PA+ + F + ADIGD QS+EQ+LSTFS H++ +V IL+
Sbjct: 343 VGLFSLMTQAGLHIPAEAGTEMGVFKQVFADIGDEQSIEQSLSTFSSHMTNLVRILDRAG 402
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL+DE+G+GTDP+EG ALA +IL+ L R + TTHY++L ENA+
Sbjct: 403 EGSLVLMDELGAGTDPTEGAALARAILEELHQRGACTLATTHYSELKNYAYATPGVENAS 462
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETLRPTYR+L G G SNA I+ +G R+II+ A+
Sbjct: 463 VEFDVETLRPTYRLLIGRPGRSNAFEISARLGLRREIIESAR 504
>gi|116072695|ref|ZP_01469961.1| MutS 2 protein [Synechococcus sp. BL107]
gi|116064582|gb|EAU70342.1| MutS 2 protein [Synechococcus sp. BL107]
Length = 779
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 282/537 (52%), Gaps = 59/537 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + Q+P SL E+ + +T A L + L ++ D+ +L + G
Sbjct: 13 MGLEAARATQLPH--SLAETLQRQAETVEMAVLDDLTEGGLSFRSVNDLRPVLLRCLKGG 70
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+ S E+ AV TL A + +++ D + L++ L +LE+++ F
Sbjct: 71 VASGEELLAVAGTLAAARKLRRQI--------DDPELRPVCTALIETMVTLPDLEQRLKF 122
Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
++ + + DRAS L +R + R+ + L L ++ A+ F + +I +R
Sbjct: 123 SLE-EGGRVADRASPPLAGLRQQWHGLRQERRDKLQELTRRYAS--F----LQDSVIAQR 175
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA + G + S+SG T F+EP+ + N V + EE +L
Sbjct: 176 HGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRVL 234
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ +A+ E + L++ +L +DLA AR + +W+ V P LS F +
Sbjct: 235 AELSDLVAQDEPVLNSLVEILLALDLALARGRYGRWLGAVPPNLSEDPEAPF----LLRD 290
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
++HPLL+ RS + +P+ VPI + V + RVV
Sbjct: 291 LRHPLLIWQHKRS------SGSPV----------------------VPISVDVSAQLRVV 322
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT S+K+LGLA+LM++AG+ LP P LPW +LADIGD QSL+Q+LST
Sbjct: 323 AITGPNTGGKTVSLKSLGLAALMARAGMLLPCSGQPSLPWCPQVLADIGDEQSLQQSLST 382
Query: 415 FSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
FSGHI RI IL + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TT
Sbjct: 383 FSGHIKRIGRILHALESGPAPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATT 442
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
H+ +L LK D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++
Sbjct: 443 HFGELKALKYSDDRFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVL 499
>gi|373116161|ref|ZP_09530317.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669625|gb|EHO34724.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
Length = 789
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 290/561 (51%), Gaps = 62/561 (11%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
++ Q+ L++TSAA+ M ++ P S ++ +A L A G L+ E+ + LRA
Sbjct: 44 DDVQRALDETSAAVDMSALRGSP-SFSGVKPVAASLQRAHMGGALNTRELLDIAAVLRAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + G+ +R ++ L ++ LE+KI I + I D AS +
Sbjct: 103 RSAREY--------GEGDERKKTCIDHLFRSLTANRFLEDKITGSIVGEDEIA-DAASPE 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +L K+ + QA + + +IT+R R V +K+ HK +P G+
Sbjct: 154 LASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEHKNDVP-GL 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+VSSSGAT+F+EP G V+ NN L E E IL+ L+AE A+ + +I D
Sbjct: 212 VHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDL 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ +D+ FARA A M P + + + + +HPLL
Sbjct: 272 LILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL-------------- 310
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P D V D+ + + +VITGPNTGGKT ++KT+GL
Sbjct: 311 -DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTVTIKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++ GL++P + R+ F +LAD+GD QS+ Q+LSTFS H+ IV IL E+L
Sbjct: 350 TLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGILGEADDETL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L ENA+ EF+
Sbjct: 410 ILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGVENASCEFN 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+++L PTYR+L G G SNA I++ +G + IIQ+A R + + R ++ L
Sbjct: 470 VDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVRFEDVLTQL 524
Query: 555 MEERRKLESQARTAASLHAEI 575
E+R+++E + AA L E+
Sbjct: 525 DEQRQEMEREKEAAARLRREM 545
>gi|182417186|ref|ZP_02948554.1| MutS2 family protein [Clostridium butyricum 5521]
gi|237668115|ref|ZP_04528099.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379028|gb|EDT76534.1| MutS2 family protein [Clostridium butyricum 5521]
gi|237656463|gb|EEP54019.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 786
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 297/574 (51%), Gaps = 69/574 (12%)
Query: 12 PFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P+ E + KL ++T+ AL ++ + P L + DI + A G L+P ++ +
Sbjct: 36 PYDNVYEINNKL-DETNEALEVILDKGNP-PLEGLFDIHEGVERARKGGTLTPEQLLKIG 93
Query: 70 RTLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TLRA N+ + E E + L+ + +L +KN LE+ I I + I
Sbjct: 94 STLRAARNMKEFFKREDFEKAYERLEDLAYILTPVKN------LEDDIERSIVSEEEIS- 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASH 186
D+AS L IR R+++ +S +++ + I ++ + L T R R + +K+ +
Sbjct: 147 DKASATLYNIR----RSLKEKNSSVREKISSIVRSHSKYLQDDLYTMRGDRYVIPVKSEY 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+F+EP V NN L E AE IL+ L+ ++ ++
Sbjct: 203 KSAVP-GIVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIDRILAELSFKVKENSE 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ ++E D FA+A + + ++ V P++ D NI +HP++
Sbjct: 262 QCLSNFKMLVEFDFIFAKARYGERLNAVRPLIRE------DGRFNIYSGRHPMI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
D VP D+ + + ++ITGPNTGGKT
Sbjct: 310 -----------------------------DDDKVVPSDVYIGEDFDTLMITGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++K +GL +M +GL +PA+++ L +F + A+IGD QS+EQNLSTFS H++ IV+I+
Sbjct: 341 TIKMVGLLHIMGLSGLLIPARDNSSLSFFTEVFAEIGDEQSIEQNLSTFSSHMTNIVEIM 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
V +SLVL DEIGSGTDP+EG ALA SI++ LR R + TTHY++L K
Sbjct: 401 RYVDDKSLVLFDEIGSGTDPAEGAALAISIIETLRSRKSRIIATTHYSELKAYALKTDGV 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA+ + E L+ E
Sbjct: 461 ENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKAYMSEENLQFEN-- 518
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
L + L E+ + +AR A++L E +L
Sbjct: 519 -----LIRDLQEKSIVAKKEAREASALKKEAEEL 547
>gi|157412576|ref|YP_001483442.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9215]
gi|157387151|gb|ABV49856.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9215]
Length = 810
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 308/629 (48%), Gaps = 86/629 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T + + + + S + DI+ + G
Sbjct: 48 MGKRAILGFGIP--SEYELSKRLLNETVEINELENNLDKSISFSNVFDISRNIEICSKGG 105
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++S SE+ + +T+ A N+ K LD + S + LL + N T K G
Sbjct: 106 VISSSELLEIAKTIAAARNLKKIF-----LDFEQRPYISSFTKNLLDHQNVETIF--KRG 158
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS +L ++R E L KK+ +I I K L
Sbjct: 159 IESNGR---ISDNASNELSVLRKEL---------LSKKLERKILVEKFIQKNLAYLQDTT 206
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
I R R + +K ++ + GI + SSSG T + EP+ V N L AEE
Sbjct: 207 IGDRNGRPVLAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITAEE 265
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
+L + ++ + + + +L ++ A R+ +++W+ G P +S
Sbjct: 266 FKLLKKWSQIVSDNSENLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS----- 320
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+ G HPLL+ + + PV +D +
Sbjct: 321 -LVGFSHPLLIWEHKKKGAPP----------------------------PVAVDFHINRN 351
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+
Sbjct: 352 IKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEE 411
Query: 411 NLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
NLSTFSGHISRI +IL+ ++ + S+VL+DEIGSGTDP EG ALA ++L+ ++ +
Sbjct: 412 NLSTFSGHISRIKEILDSLNNKRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDIT 471
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I
Sbjct: 472 LATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENI 531
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ A LRP ++ +E+ + L EER K ++ A AA L A L+ E +
Sbjct: 532 LNEAANY---LRP-KEVDNINEIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN-- 585
Query: 588 ISVYRYQFAVTSTLSKVDFDAIPNIDQCK 616
Y YQ K++ + I I++ K
Sbjct: 586 ---YEYQ--------KINAEKIQEIERSK 603
>gi|229550105|ref|ZP_04438830.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255972883|ref|ZP_05423469.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257422707|ref|ZP_05599697.1| MutS2 family protein [Enterococcus faecalis X98]
gi|312952408|ref|ZP_07771283.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|384518505|ref|YP_005705810.1| mutS2 protein [Enterococcus faecalis 62]
gi|422693114|ref|ZP_16751129.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|422706763|ref|ZP_16764461.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|422726956|ref|ZP_16783399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|229304809|gb|EEN70805.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255963901|gb|EET96377.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257164531|gb|EEU94491.1| MutS2 family protein [Enterococcus faecalis X98]
gi|310629792|gb|EFQ13075.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|315152573|gb|EFT96589.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|315155852|gb|EFT99868.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|315157981|gb|EFU01998.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|323480638|gb|ADX80077.1| mutS2 protein [Enterococcus faecalis 62]
Length = 788
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|153955797|ref|YP_001396562.1| recombination and DNA strand exchange inhibitor protein
[Clostridium kluyveri DSM 555]
gi|219856164|ref|YP_002473286.1| hypothetical protein CKR_2821 [Clostridium kluyveri NBRC 12016]
gi|229486370|sp|A5N245.1|MUTS2_CLOK5 RecName: Full=MutS2 protein
gi|254766597|sp|B9E5U7.1|MUTS2_CLOK1 RecName: Full=MutS2 protein
gi|146348655|gb|EDK35191.1| MutS-related protein [Clostridium kluyveri DSM 555]
gi|219569888|dbj|BAH07872.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 786
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 293/560 (52%), Gaps = 72/560 (12%)
Query: 24 LNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
L +T AL ++ S+ P D + D+ + A G +L P++I + L+A K
Sbjct: 47 LEETEEALKLIISRGNPPFD--GVYDVRQGVKMAQKGSILMPAQIFRIGAILKASRRFEK 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ E +G + + ++ + L LE+KI I+ + I DRAS L IR
Sbjct: 105 YIKAKGEGEG-----FRIIEDICQGIVLLKGLEDKIFISIESEDEI-SDRASSLLYNIRK 158
Query: 141 E-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
R +N + ++SL++ ++ + L T R R + ++A +K L+P G+
Sbjct: 159 SIRDKNASVRDKVNSLIRNYSSYL------QDNLYTIRGDRYVLPVRAENKALVP-GLVH 211
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG+T ++EP V NN L E AE IL L+ EI + IK D +
Sbjct: 212 DQSSSGSTLYIEPMALVNLNNEIKELKLKEKAEIDRILYELSKEIHDNIVVIKNNADIIW 271
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D FA+A F ++G PI++ + +EG +HPL+
Sbjct: 272 ELDFIFAKAKFGSELNGNIPIVNDNCIIDI-----VEG-RHPLI---------------- 309
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
TV VP+D+ + + +VITGPNTGGKT ++KT+GL +
Sbjct: 310 --------DRKTV-----------VPMDVYMGKDFTCLVITGPNTGGKTVALKTMGLLHI 350
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+ +GL +PA+ + + +F I ADIGD QS+EQNLSTFS H++ I++I+ +SL+L
Sbjct: 351 MALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLIL 410
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL+ L+DR + V TTHY++L K ENA+ EF ++
Sbjct: 411 FDELGAGTDPTEGAALAVSILENLKDRGSMIVATTHYSELKAYALKSNGVENASVEFDVD 470
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL+PTY+++ G G SNA I+K +G II+ A++ + E L+ E +L QSL
Sbjct: 471 TLKPTYKLMIGIPGKSNAFEISKRLGLPEFIIKAARENIASEALKFE-------DLIQSL 523
Query: 555 MEERRKLESQARTAASLHAE 574
E+R K E+ R A L E
Sbjct: 524 QEKRIKAENYFREAEILKRE 543
>gi|238917772|ref|YP_002931289.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
gi|259511156|sp|C4Z417.1|MUTS2_EUBE2 RecName: Full=MutS2 protein
gi|238873132|gb|ACR72842.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
Length = 787
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 281/556 (50%), Gaps = 59/556 (10%)
Query: 24 LNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ AL+ + Q +D S +DI + G L+ SE+ + A+ + K +
Sbjct: 47 LNETNDALSRIFQKGTVDFSQTKDIRASVARLKVGSSLNISELL----NISAILSCAKHV 102
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
+ E DS+ +L+N + L +I CI + I D AS +L IR +
Sbjct: 103 KDYYEHREDSISG------MLENLATVDALNSQIKKCIISEDEI-SDDASSNLRSIRRSK 155
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ + S L K+ + +IT R+ R C+ +KA +K P G+ + SS+G
Sbjct: 156 SIANDRIHSELNKLLNSPTYRTYLQDYVITTRQGRYCLPVKAEYKSAFP-GMIHDQSSTG 214
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP V+ NN L E AE IL+ L+A+ + E+ + ++E+D F
Sbjct: 215 STLFIEPAAVVKLNNDIRELELKEAAEIEVILADLSAKAGEHTEELLCDYEILVELDCIF 274
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A A+ M P++++ INI+ +HPL+ ++
Sbjct: 275 AKAQLARHMHASRPVMNTSG------IINIKKGRHPLIESHTV----------------- 311
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VPIDI + + ++++ITGPNTGGKT S+KT+GL +LM+++GL
Sbjct: 312 ------------------VPIDIYLGTDFKLLIITGPNTGGKTVSLKTVGLLTLMAQSGL 353
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA +H + F I ADIGD QS+EQ+LSTFS H++ V IL+ LVL DEIG+
Sbjct: 354 FIPALDHSDIAVFKNIYADIGDEQSIEQSLSTFSSHMTNTVKILKEADENCLVLFDEIGA 413
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA +IL L+ R + TTHY+++ ENA+ EF +E+LRPTY
Sbjct: 414 GTDPTEGAALAIAILNDLKMRGVTTMATTHYSEIKLYALSTEGVENASCEFDVESLRPTY 473
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
R+L G G SNA I+K +G I+ A ERL E ++ L R LE
Sbjct: 474 RLLIGIPGKSNAFAISKKLGLPDYILSDAS---ERLNAEDVHFE--DIVSDLEHARISLE 528
Query: 563 SQARTAASLHAEIMDL 578
+ S AEI L
Sbjct: 529 KEQAEVESYKAEIASL 544
>gi|422701663|ref|ZP_16759503.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
gi|315170093|gb|EFU14110.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
Length = 788
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLNPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|357057959|ref|ZP_09118816.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
gi|355374536|gb|EHG21830.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
Length = 784
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 295/572 (51%), Gaps = 64/572 (11%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
++ IP G +E +L ++T+ A+ + Q+Q I D+ +L A G +L E+ +
Sbjct: 32 RSVIPSG-DYDEVVRLHHETAEAVQVQQTQSPPFGGIYDLRTLLKKASMGAVLEIDELRS 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC--NFLTELEEKIGFCIDCKLL 125
V T+ + NV K LD L+ + +E+L + ++E F D
Sbjct: 91 VMSTMCGMRNV-KYFFRDLVLDVPHLKTMAKPIEILGMVERHLKDTIDEHGNFRDDASPE 149
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
L R + +L+ +A R E L ++L A Q + + ++T R R + +K
Sbjct: 150 --LRRITRELQTAQA---RVKERLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQE 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ P G+ + S+SGAT F+EP VE NN ++ + E IL L+ EIA++
Sbjct: 201 YRNYFP-GVIHDQSASGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSTEIAQNA 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + E+DL FARAG A+ M P L+ QS V ++++ +HPLL
Sbjct: 260 GILSENCTILSEMDLIFARAGLAREMQAYPPTLN-QSGV-----VHLKRARHPLL----- 308
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
P D VPIDI++ +++ITGPNTGGKT
Sbjct: 309 -----------P-------------------KDKVVPIDIELGQNFSILLITGPNTGGKT 338
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
SMKTLGL +L++++G +LP +P + I ADIGD QS+EQ+LSTFS H IV I
Sbjct: 339 VSMKTLGLLALLAQSGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRI 398
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
++ + L+L+DE+G+GTDP EG ALA SI+ + + G+AVV TTHYA L ++
Sbjct: 399 IDKAEQGDLILLDEVGAGTDPDEGAALARSIIAHFLQQ-GIAVVATTHYAVLKTYAYAES 457
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA+ EF L+TLRPTYR+L G G SNA +I++ +G + I+ RA+ + ++
Sbjct: 458 GIENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQDIVARAEIYIS------EE 511
Query: 545 HRKSE-LYQSLMEERRKLESQARTAASLHAEI 575
H E + L E++ E++ R + AEI
Sbjct: 512 HTHFEHVVNELEREKQDYETKNRELRNKEAEI 543
>gi|365158083|ref|ZP_09354324.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
gi|363621912|gb|EHL73094.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
Length = 784
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 274/518 (52%), Gaps = 59/518 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + PLD + +I + A G LL+ E+ + T+ + + K
Sbjct: 47 QEETDEAATVLRVAGHAPLD--GLHNIRPHVKRAKIGGLLNGEELIQIAGTIYSGRMMKK 104
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E E +G+ L P+L E + LTELE I +D I LD AS L +R
Sbjct: 105 FIAELVE-NGEKL----PILSEQTEQIPVLTELEHDIKRAVDENGEI-LDSASSTLREVR 158
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
++ + R E L+S+++ AQ + I +T R R + +K +++ GI
Sbjct: 159 SQIRIHEGRIRERLESMIRSKNAQKMLSDAI----VTIRNDRYVIPVKQEYRHHY-GGIV 213
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SSSG T F+EP+ V+ NN +L E E IL L+A++ ++ E+ ++ +
Sbjct: 214 HDQSSSGQTLFIEPESIVQLNNQLKQLKLKEQEEIEKILRELSAKVQENADELLVIVQVM 273
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
++D FA+A A+ M P+++ + + I I +HPLL
Sbjct: 274 GDLDFIFAKAKLAKSMKASKPLMNREGY------IRIHQARHPLL--------------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
P++ VP DI++ + +VITGPNTGGKT ++KT+GL +
Sbjct: 313 -PIEE-------------------AVPNDIELGKDYTAIVITGPNTGGKTVTLKTIGLLT 352
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM+++GL +PA+ + F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ ESLV
Sbjct: 353 LMAQSGLQIPAQEGSEMAVFHSVFADIGDEQSIEQSLSTFSSHMVNIVDILKEVTGESLV 412
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA SIL + + V TTHY +L NA+ EF++
Sbjct: 413 LFDELGAGTDPQEGAALAISILDEVLEVGARVVATTHYPELKAYGYNRDGVINASVEFNV 472
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
ETL PTYR+L G G SNA I++ +G + KII+RA++
Sbjct: 473 ETLSPTYRLLIGVPGRSNAFEISERLGLNHKIIERARQ 510
>gi|210623508|ref|ZP_03293853.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
gi|210153566|gb|EEA84572.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
Length = 793
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 288/561 (51%), Gaps = 54/561 (9%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE Q L +T+ A +++ + ++L I D+ + A G L P + V TLRA
Sbjct: 40 FEEVQYRLQETTEAQSILIKRGHVNLGGIHDVLDKVKRAEIGASLDPGSLLMVADTLRAA 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASED 134
+ L+ + DG+ P+++ L ++ E+E+ + I ++ I D AS
Sbjct: 100 ----RVLSNSLSGDGEEEDFNYPIIQSLATSLYIHREIEDAVYNAIVSEIEI-ADSASHT 154
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +++ S L + + + +I+ R R V +KA ++ ++ GI
Sbjct: 155 LRDIRRKIVQKNQSIRSKLNTIISSATYQKYLQDSIISMRGDRFVVPVKAEYRSVVA-GI 213
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP VE NN +L E E IL+ L+ I + REI +
Sbjct: 214 VHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILAELSKMIGEIAREIISNQEI 273
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +ID FA+ + M G+ P L+ D S I+ +HPLL
Sbjct: 274 LEKIDFIFAKGKLSLEMKGIDPKLNK------DKSFVIKNGRHPLL-------------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P K + N+ I + E +VITGPNTGGKT ++KT+GL
Sbjct: 314 -DP-KKVIANT-------------------IYLGDEFHTLVITGPNTGGKTVTIKTVGLF 352
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++GL++PA + +D I ADIGD QS+EQ+LSTFS H++RIV IL+ V+ +SL
Sbjct: 353 ALMTQSGLHIPADFGSSMCVYDNIFADIGDEQSIEQSLSTFSSHMTRIVSILDKVTEDSL 412
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
V+ DE+G+GTDP EG ALA +IL+ +R + TTHY++L ENAA EF
Sbjct: 413 VIFDELGAGTDPVEGAALAIAILEDVRMAGAKCIATTHYSELKNYALTKKGVENAAVEFD 472
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR+L G G SNA I+K +G +I RA++ + E + +L Q++
Sbjct: 473 VETLSPTYRLLIGVPGKSNAFEISKKLGLSEFVINRAKEFINTENIELE-----DLLQNV 527
Query: 555 MEERRKLESQARTAASLHAEI 575
+ R K E A L EI
Sbjct: 528 EKNRIKAEEDRAEAEKLKTEI 548
>gi|397906326|ref|ZP_10507138.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
gi|397160629|emb|CCJ34475.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
Length = 788
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 277/531 (52%), Gaps = 58/531 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P LE +L A +++ L L ++DI + A G L+PSE+ V
Sbjct: 35 LPTSNLLEVEDRLRETKEAYDVVLKWGSLPLEGVKDIEDSVKRAKMGFTLTPSELLRVSD 94
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
LR V K+L ++ DG + Y + E++++ ++ LEE I I + I DR
Sbjct: 95 ILR----VTKRL-KSFFADGAKKENYPIINEIIESLFYIKSLEEDIERAIVSEEEID-DR 148
Query: 131 ASEDLELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
ASE L IR + +R E L S+L ++ + +P+IT R R + +K+
Sbjct: 149 ASEKLYSIRRAIKDKNQRVKEKLQSMLHSLSKYL------QEPIITMRNGRYVIPVKSEF 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K + G+ + S+SG+T F+EP VE NN L E E IL L+ ++AK+
Sbjct: 203 KGSVA-GLVHDQSASGSTLFIEPMPIVELNNEIRELELKEKVEIERILKELSEKVAKNSE 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ + + + +D A+A F +D P V+ IN++ +HPL+
Sbjct: 262 ELLHDNENIAYLDFLMAKAKFGLDLDASIP------EVNDKGIINMKRARHPLI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
D E VPIDI++ +VITGPNTGGKT
Sbjct: 310 --------------DKEKV---------------VPIDIRLGQNYNALVITGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL +LM+ AGL +P + + F+ + ADIGD QS+EQ+LSTFS H+ I++I+
Sbjct: 341 TLKTTGLLTLMAMAGLAIPCSDGSTVSVFNKVFADIGDEQSIEQSLSTFSSHMKNIINIV 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +SL+L+DE+G+GTDPSEG ALA S+L+Y + V TTHY+++ + F
Sbjct: 401 KEADEKSLILVDELGAGTDPSEGAALAMSLLEYFYKKGAKLVATTHYSEIKVFAMEKEGF 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ENA+ EF +ETLRPTYR+L G G SNA I+K +G D II RA++ + +
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLDEGIINRAREFISK 511
>gi|449017364|dbj|BAM80766.1| DNA mismatch repair protein MutS, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 1029
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 235/425 (55%), Gaps = 56/425 (13%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS++L ++R + +R E + L++ I Q+ G + T R R + +KA+HK
Sbjct: 338 ASDELRVVRTQLQRIKERIKDELQR----IIQSKGDALQDRTPTTRYDRQVLAVKATHKR 393
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S++G+T F+EP VE N+ RLS E A E I + L+ + + +
Sbjct: 394 RIP-GIVHDYSNTGSTVFVEPHAIVELNSELRRLSRRESAIERDIWNQLSKRLHAASVRL 452
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +++ID + ARA +A+ + ++ S + D I G HPLLL SL+S+
Sbjct: 453 SSTFEALIDIDFSVARARYARHIGASLVRFAADSEMPVD----IRGACHPLLLWRSLKSM 508
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ VPID + ++TG N GGKT +
Sbjct: 509 ESV-----------------------------VPIDFHLRGIASAAILTGANAGGKTLAA 539
Query: 369 KTLGLASLMSKAGLYLPAKN-HPRL------------PWFDLILADIGDHQSLEQNLSTF 415
KTLGL LM+K+G+ +P ++ P + P+FD +LADIGD QSLEQNLSTF
Sbjct: 540 KTLGLIVLMAKSGIPIPRRHADPNMSPTTLLDEDVTVPYFDRVLADIGDEQSLEQNLSTF 599
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL--RDRVGLAVVTTHY 473
SGHI RI +IL+ + +SLVL+DE+G+GTDP+EG AL ++++YL + V VTTH+
Sbjct: 600 SGHIRRIGEILQCATADSLVLLDELGAGTDPAEGAALGIALVRYLVEKKNVRFVFVTTHH 659
Query: 474 ADLSCLKDKD-TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
++L L + +R+EN + EF + L PTYR+LWG G S AL +A+ +G D I+Q A+
Sbjct: 660 SELKTLFFMEPSRYENVSVEFDTDRLEPTYRLLWGVAGRSYALLVARRLGLDHDILQEAE 719
Query: 533 KLVER 537
L+ER
Sbjct: 720 NLLER 724
>gi|256958895|ref|ZP_05563066.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|257078926|ref|ZP_05573287.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294780084|ref|ZP_06745460.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|307271106|ref|ZP_07552389.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|397699794|ref|YP_006537582.1| mutS2 protein [Enterococcus faecalis D32]
gi|422708383|ref|ZP_16765911.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|422718757|ref|ZP_16775408.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|256949391|gb|EEU66023.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|256986956|gb|EEU74258.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294452836|gb|EFG21262.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|306512604|gb|EFM81253.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|315033806|gb|EFT45738.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|315036891|gb|EFT48823.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|397336433|gb|AFO44105.1| mutS2 protein [Enterococcus faecalis D32]
Length = 788
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|365845197|ref|ZP_09385983.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
gi|364561374|gb|EHM39279.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
Length = 789
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 290/561 (51%), Gaps = 62/561 (11%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
++ Q+ L++TSAA+ M ++ P S ++ +A L A G L+ E+ + LRA
Sbjct: 44 DDVQRALDETSAAVDMSALRGSP-SFSGVKPVAASLQRAHMGGALNTRELLDIAAVLRAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + G+ +R ++ L ++ LE+KI I + I D AS +
Sbjct: 103 RSAREY--------GEGDERKKTCIDHLFRSLTANRFLEDKITGSIVGEDEIA-DAASPE 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +L K+ + QA + + +IT+R R V +K+ HK +P G+
Sbjct: 154 LASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEHKNDVP-GL 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+VSSSGAT+F+EP G V+ NN L E E IL+ L+AE A+ + +I D
Sbjct: 212 VHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDL 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ +D+ FARA A M P + + + + +HPLL
Sbjct: 272 LILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL-------------- 310
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P D V D+ + + +VITGPNTGGKT ++KT+GL
Sbjct: 311 -DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTVTIKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++ GL++P + R+ F +LAD+GD QS+ Q+LSTFS H+ IV IL E+L
Sbjct: 350 TLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGILGEADGETL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L ENA+ EF+
Sbjct: 410 ILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGVENASCEFN 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+++L PTYR+L G G SNA I++ +G + IIQ+A R + + R ++ L
Sbjct: 470 VDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVRFEDVLTQL 524
Query: 555 MEERRKLESQARTAASLHAEI 575
E+R+++E + AA L E+
Sbjct: 525 DEQRQEMEREKEAAARLRREM 545
>gi|406981818|gb|EKE03215.1| hypothetical protein ACD_20C00234G0037 [uncultured bacterium]
Length = 790
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/562 (32%), Positives = 293/562 (52%), Gaps = 75/562 (13%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L N T A + + L I +I ++N A GQ L ++ + T+ A +
Sbjct: 48 ELQNTTEAKFLLDLAISPPLGGIRNITELINCAKIGQTLRNQDLIDIASTIGASRRLKSF 107
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEEKIGFCID--CKLLIILDRASEDLELI 138
++ Q +P L L+ F + LEE I D C+ ++D AS +L+ +
Sbjct: 108 FSK--------YQEETPNLFLVSQNLFENKILEEDIINTFDDSCE---VVDNASPELKRL 156
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R+ K NL + L + + + +P+ T R R + +K +K + GI +
Sbjct: 157 RSSYKDQTYNLKNKLNSIINSAEYSKFLQEPVYTLRGDRYVIPVKIEYKSNV-QGIVHDS 215
Query: 199 SSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
SSSGAT F+EPK VE NN +E+++ + E IL+ L+ + +EI+Y +D
Sbjct: 216 SSSGATLFIEPKSIVELNNNLREIELKIDH----EIKRILAELSNRVGAQAQEIEYTLDS 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ E+D FA+A ++ + P ++++ ++S +KHP+L+ S
Sbjct: 272 LAELDFIFAKAKYSILLKATEPAINTERYISLTR------VKHPILITS----------- 314
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+EN IS+ ++++ + ++ITG NTGGKT +KT GL
Sbjct: 315 -------IENV----------ISN-----NVEIGKDWSSLIITGSNTGGKTVILKTTGLC 352
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
LM+KAGL++PA+ P F I ADIGD QS+ QNLSTFSGH++ I+ IL + ESL
Sbjct: 353 VLMAKAGLHIPAQEADIYP-FKNIFADIGDEQSVIQNLSTFSGHMTNIISILNQLDNESL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL+DEIG+GTDPSEG ALA +IL+ L + +VTTHY +L L F NA+ EF
Sbjct: 412 VLLDEIGAGTDPSEGSALAQAILEALHKKGARTIVTTHYGELKALAYTQEGFYNASVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-----------KLVERLRPERQ 543
+++L PTY+++ G G SNA+ IAK++G +I AQ +++E L+ +Q
Sbjct: 472 IDSLAPTYKLIMGLPGKSNAITIAKNLGLSAEISDNAQNIYITQKDPTGEIMEGLQNTQQ 531
Query: 544 Q-HRKSELYQSLMEERRKLESQ 564
+ R ++ +S EE +LE++
Sbjct: 532 ELSRNAQKIESTKEELERLETE 553
>gi|422736468|ref|ZP_16792731.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
gi|315166623|gb|EFU10640.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
Length = 788
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|312622156|ref|YP_004023769.1| muts2 family protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312202623|gb|ADQ45950.1| MutS2 family protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 787
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 286/541 (52%), Gaps = 74/541 (13%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
E+I L + G L+P EI + + L+ + L+ Q +S L +
Sbjct: 68 FENILPSLKKSKLGATLNPQEILQIGKVLKLSYEMRTYLSYT--------QDFSFLESMK 119
Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
K L L+E I ID L ILD AS L+ IR ++ R +EN L+S+++
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTPDEILDTASSKLKEIR-DKIRKLENKIRDELNSMIRD 174
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
Q F + +P+IT R ++ + +KA + + GI + S++GAT F+EP VE
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIIHDQSATGATLFVEPFVCVEI 229
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
+N L N E E IL +++ IA EI+ ++E+D+ F +A +A+ M+
Sbjct: 230 SNQIRILKNKEKEEIERILQEISSLIASYCEEIETSFYALVELDIVFTKAIWAKEMNASK 289
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI+++ IN++ +HPL+
Sbjct: 290 PIINASG------IINLKKARHPLIQ---------------------------------- 309
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
D VPIDI + + V++ITGPNTGGKT ++KT+GL L+ ++G+++PA L F
Sbjct: 310 -KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIF 368
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+ Q+LSTFS H+ I++I + ++LVL+DEIG+GTDP EG ALA +
Sbjct: 369 QKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKA 428
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL+YL ++ + TTHY +L ++ RFENA+ EF ++TL+PTYR+L G G SNAL
Sbjct: 429 ILKYLSEKGSKVIATTHYGELKIFAQQENRFENASCEFDVKTLKPTYRLLIGIPGRSNAL 488
Query: 516 NIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
I+ ++G D+ I++ A QK + +R+ E +Q +K + ++ K E+QA A
Sbjct: 489 VISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKKKEAEENLELAQKLKHEAQALKA 548
Query: 569 A 569
A
Sbjct: 549 A 549
>gi|29375971|ref|NP_815125.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227518669|ref|ZP_03948718.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227553200|ref|ZP_03983249.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|422715235|ref|ZP_16771958.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|422716036|ref|ZP_16772752.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|424676844|ref|ZP_18113715.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|424681338|ref|ZP_18118125.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|424683526|ref|ZP_18120276.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|424686569|ref|ZP_18123237.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|424690157|ref|ZP_18126692.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|424695180|ref|ZP_18131563.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|424697010|ref|ZP_18133351.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|424699605|ref|ZP_18135816.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|424703382|ref|ZP_18139516.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|424706073|ref|ZP_18142086.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|424717217|ref|ZP_18146515.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|424720798|ref|ZP_18149899.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|424724349|ref|ZP_18153298.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|424733935|ref|ZP_18162490.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|424743762|ref|ZP_18172067.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|424749463|ref|ZP_18177566.1| MutS2 family protein [Enterococcus faecalis ERV93]
gi|81722394|sp|Q835H3.1|MUTS2_ENTFA RecName: Full=MutS2 protein
gi|29343433|gb|AAO81195.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227073849|gb|EEI11812.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227177673|gb|EEI58645.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|315575541|gb|EFU87732.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|315580018|gb|EFU92209.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|402351045|gb|EJU85937.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|402356464|gb|EJU91198.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|402364524|gb|EJU98959.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|402364844|gb|EJU99275.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|402367423|gb|EJV01764.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|402368722|gb|EJV03029.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|402375534|gb|EJV09514.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|402377339|gb|EJV11250.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|402385387|gb|EJV18927.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|402386565|gb|EJV20071.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|402388716|gb|EJV22144.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|402390945|gb|EJV24265.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|402393269|gb|EJV26499.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|402395332|gb|EJV28441.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|402399891|gb|EJV32745.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|402407714|gb|EJV40219.1| MutS2 family protein [Enterococcus faecalis ERV93]
Length = 788
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|373494347|ref|ZP_09584952.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
gi|371968844|gb|EHO86298.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
Length = 796
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 260/511 (50%), Gaps = 49/511 (9%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
++L + T A +M+ L + DI L A G L+ ++ V+ L + V
Sbjct: 45 EELRSTTEAVDLIMRKGTLPTGGLYDIREALLLAKKGGSLTMRQLLEVQNVLAISSEV-- 102
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
A + D+L + E++ T LE++I CI + + D AS L+ IR
Sbjct: 103 ----VAFMHDDALPELKHIGEMVDLIVEFTALEKEISRCILTEDEMA-DNASPKLKDIRR 157
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
R + + L ++ + ++T R R + +K ++ P G+ + S
Sbjct: 158 SIHRQNQAIKDKLSRIITSSSNKTYLQDAIVTMRDGRYVIPVKQEYRSFFP-GMVHDQSK 216
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
GAT F+EP+G VE NN L E E IL+ L++ +A+ REI+ ++ + ++D
Sbjct: 217 GGATLFIEPQGVVESNNKLRELEAEEQLEIARILAELSSRVAEHYREIRSNLELLTKLDF 276
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+ + C + +S+ + D + + +HPL
Sbjct: 277 IMAKGKLS------CKMHASEPKIDADGELRLLSARHPL--------------------- 309
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
+E + VP+DI++ + R ++ITGPNTGGKT S+KT GL +M+++
Sbjct: 310 -IEYKK-------------AVPVDIRIGGDYRTLIITGPNTGGKTVSLKTAGLLVMMAQS 355
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GL++PA + LP F + ADIGD QS+EQ+LSTFS H+ IV +++ S +SLVL+DE+
Sbjct: 356 GLHIPASHASTLPVFGDVFADIGDEQSIEQSLSTFSSHMKNIVSVIDKASYDSLVLVDEL 415
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP+EG ALA +IL+ D L + TTHY +L + ENAA EF +ETL P
Sbjct: 416 GAGTDPTEGAALAIAILERFYDSGALTMATTHYNELKKYALATSGVENAAMEFDVETLTP 475
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
TYR+L G G SNA I+K +G +I+RA
Sbjct: 476 TYRLLIGVPGKSNAFEISKKLGLSESVIERA 506
>gi|257419214|ref|ZP_05596208.1| MutS2 protein [Enterococcus faecalis T11]
gi|257161042|gb|EEU91002.1| MutS2 protein [Enterococcus faecalis T11]
Length = 788
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQVNHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|154482859|ref|ZP_02025307.1| hypothetical protein EUBVEN_00555 [Eubacterium ventriosum ATCC
27560]
gi|149736287|gb|EDM52173.1| MutS2 family protein [Eubacterium ventriosum ATCC 27560]
Length = 800
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 288/584 (49%), Gaps = 69/584 (11%)
Query: 3 HAVVQKAQIPFGKSLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
HA+V A I ++E+QK QT AL+ + Q L S I +I + G L
Sbjct: 43 HALVPSADI---HEIKENQK---QTGDALSRIWQKGSLSFSGIHNIGESIKRLEIGSTLG 96
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+ + L+ V E + DSL ++ + LT L+ I CI
Sbjct: 97 TGELLRIDSLLKVALRVKTFSRRDDEAERDSLD------DMFEAIEPLTNLKNDIERCII 150
Query: 122 CKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
+ I D AS +L+ IR + K R L SL+ + + + LIT R R
Sbjct: 151 SEDEIA-DDASANLKNIRRQMKITNDRVHSQLSSLINSQSGHTY----LQDALITMRDGR 205
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
CV +K ++ + +GI + SS+G+T F+EP VE NN L E E IL+ L
Sbjct: 206 YCVPVKQEYRGNV-NGIIHDQSSTGSTLFIEPAAVVELNNKLRELEGKEADEIQIILANL 264
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+ A+ E+K M + ++D FA+A A+ M P + Q INI+ +H
Sbjct: 265 SMACAEHIYELKTDMKILPKLDFIFAKASLAKEMKASMPEFNDQRQ------INIKKGRH 318
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL +P K VPIDI + + ++++T
Sbjct: 319 PLL---------------DPKKV--------------------VPIDIHLGKDFNLLIVT 343
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT S+KT+GL +LM +AGL++PA +L F + ADIGD QS+EQ+LSTFS
Sbjct: 344 GPNTGGKTVSLKTVGLLTLMGQAGLHIPAFEGSKLAVFKEVFADIGDEQSIEQSLSTFSA 403
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H+ V+IL ++SLVL DE+G+GTDP EG AL SIL +L++ + TTHY++L
Sbjct: 404 HMVNTVNILNQADQDSLVLFDELGAGTDPVEGAALGISILTFLKNIGSRIMATTHYSELK 463
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+NA+ EF +ETLRPTYR+L G G SNA I+ +G II+ A+ ++
Sbjct: 464 LFALSTEGVQNASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDYIIEDAKSHID- 522
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ +Q ++ + +R ++E T A ++I L R+
Sbjct: 523 --SDNEQFE--DVLSEIERQRIQIEKDQETIAVYKSQIKSLKRD 562
>gi|392957411|ref|ZP_10322935.1| recombination and DNA strand exchange inhibitor protein [Bacillus
macauensis ZFHKF-1]
gi|391876818|gb|EIT85414.1| recombination and DNA strand exchange inhibitor protein [Bacillus
macauensis ZFHKF-1]
Length = 787
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 255/497 (51%), Gaps = 57/497 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +L E+ T+ +K+ E DG L PLL
Sbjct: 65 LGGIRDIRASVKRAAIGGMLFAEELVDSATTIHG-GRRFKRFVEGMVEDGIEL----PLL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
++ + L ELE I CID + +D AS +L IR + + R E L+S+++
Sbjct: 120 AARVEEIDPLQELEAAIKACIDDNGHV-MDSASPELRTIRGQLRTFEARVREKLESMVRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + +IT R R + +K ++ G+ + SSSGAT F+EP+ +
Sbjct: 179 SSYQKM----LSDTIITIRNDRFVLPVKQEYRANF-GGMVHDQSSSGATLFIEPQAIITI 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL L+ + + + + + + +ID FA+A +++ +
Sbjct: 234 NNQLKEAKAKETREIEKILRELSGVVGEHAEPLLHNVAVLAQIDFIFAKAFYSRELKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++ Q S++I +HPL+ ++
Sbjct: 294 PIMNDQQ------SMSIIKARHPLIDAEAV------------------------------ 317
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
VPID + + ++ITGPNTGGKT ++KT+GL SLM+++GL +PA+ + F
Sbjct: 318 -----VPIDATLGGAFQSLIITGPNTGGKTVTLKTIGLLSLMAQSGLQIPAEEQSEMTVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ I ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ +SLVL DE+G+GTDP EG ALA S
Sbjct: 373 ETIYADIGDEQSIEQSLSTFSSHMVNIVDILKTVNYKSLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+ R V TTHY++L NA+ EF++ETLRPTY++L G G SNA
Sbjct: 433 ILDYVFARGARVVATTHYSELKAYAYNREGVMNASVEFNVETLRPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQ 532
I++ +G D +II A+
Sbjct: 493 EISRRLGLDVRIIDEAK 509
>gi|126695576|ref|YP_001090462.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9301]
gi|126542619|gb|ABO16861.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9301]
Length = 803
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 298/598 (49%), Gaps = 81/598 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T + + + + S + DI+ + G
Sbjct: 41 MGKRAILSFDIP--SEYESSKRLLNETVEITQLENNLDKSISFSGVFDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++S SE+ + +T+ A N+ K L LD + S + L+ + N T K G
Sbjct: 99 VISSSELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNIETIF--KKG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS +L ++R E L KK+ +I I K L
Sbjct: 152 IESNGR---ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTT 199
Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
I R R + +K ++ K+ GI + SSSG T + EP V N L A
Sbjct: 200 IGDRYGRPVLAVKVNYVDKF---KGIIHDSSSSGNTVYFEPDSVVNKGNKIASLEARITA 256
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L + ++ + + + +L ++ A R+ +++W+ G P +F+
Sbjct: 257 EEFKLLKKWSLVVSDNSENLIEMAAILLRLENALTRSRYSKWIGGKTP--------TFEK 308
Query: 289 S--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
S I++ G HPLL+ + + PV +D
Sbjct: 309 SPIISLIGFTHPLLIWEHKKKGACP----------------------------PVAVDFY 340
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+Q
Sbjct: 341 INRNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQ 400
Query: 407 SLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
SLE+NLSTFSGHISRI +IL+L+ + S+VL+DEIGSGTDP EG ALA ++L+ ++
Sbjct: 401 SLEENLSTFSGHISRIKEILDLLDHKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANK 460
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+ TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG
Sbjct: 461 SDITFATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGL 520
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
D I+ A L+P+ + S + + L EE+ K ++ A AA L A L+ E
Sbjct: 521 DESILNEA---ANYLKPKEVDNINS-IIKGLEEEKIKQQNSAEAAAELIARTEILHDE 574
>gi|182626137|ref|ZP_02953897.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|422874800|ref|ZP_16921285.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
gi|177908574|gb|EDT71099.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|380304441|gb|EIA16730.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
Length = 786
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 244/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + +DG PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLDGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|312109983|ref|YP_003988299.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
gi|311215084|gb|ADP73688.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
Length = 784
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 261/516 (50%), Gaps = 57/516 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ +AAL + PL I DI L A G LSP E+ + T+ A +
Sbjct: 47 QEETDEAAAALRLRGHVPL--GGIVDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + LD ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+S+++ +AQ + +IT R R + +K ++ GI
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT +A + + +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P L+ + ++ + +HPL+ ++
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP DI++ E +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKEYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F I ADIGD QS+EQ+LSTFS H+ IV+IL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
TLRPTY++L G G SNA I+K +G +II+RA+
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLAERIIERAK 509
>gi|146296717|ref|YP_001180488.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|238685558|sp|A4XK62.1|MUTS2_CALS8 RecName: Full=MutS2 protein
gi|145410293|gb|ABP67297.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 787
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 291/542 (53%), Gaps = 76/542 (14%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
E+I L + G L+P EI + + L+ + L+ Q +S L +
Sbjct: 68 FENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRSYLSYT--------QDFSFLESMK 119
Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
K L L+E I ID L ILD AS L+ IR +R R +E+ L+S+++
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTADEILDTASPRLKEIR-DRIRKLESRIRDELNSMIRD 174
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
Q F + +P+IT R ++ + +KA + + GI + S++GAT F+EP VE
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEI 229
Query: 216 NNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+N ++R+ S+ EE IL +++ IA EI+ ++E+D+ F +A +A+ M+
Sbjct: 230 SN-QIRILKSQEKEEIERILQEISSLIASYCDEIETSFYALVELDIVFTKAIWAKEMNAS 288
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P++++ IN++ +HPL+
Sbjct: 289 KPVINTSG------IINLKKARHPLIQ--------------------------------- 309
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
D VPIDI + + V++ITGPNTGGKT ++KT+GL L+ ++G+++PA +L
Sbjct: 310 --KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCI 367
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
F I ADIGD QS+ Q+LSTFS H+ I++I + ++LVL+DEIG+GTDP EG ALA
Sbjct: 368 FQKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAK 427
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+IL+YL ++ + TTHY +L ++ RFENA+ EF ++TL+PTYR+L G G SNA
Sbjct: 428 AILKYLSEKGSKVIATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNA 487
Query: 515 LNIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQART 567
L I+ ++G D+ I++ A QK + +R+ E +Q RK + + KLE+QA
Sbjct: 488 LVISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELARKLKLEAQALK 547
Query: 568 AA 569
AA
Sbjct: 548 AA 549
>gi|255281368|ref|ZP_05345923.1| DNA mismatch repair protein MutS [Bryantella formatexigens DSM
14469]
gi|255268325|gb|EET61530.1| MutS2 family protein [Marvinbryantia formatexigens DSM 14469]
Length = 792
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 277/530 (52%), Gaps = 74/530 (13%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+EE + L +TS AL+M+ Q + S + +I G L G +LSP+E+ A+ R L
Sbjct: 40 IEEIRMLQAETSLALSMLYQKGHVSFSGVTNIRGSLKRLEVGSILSPAELLAICRLLEVT 99
Query: 76 NNV----WKKLTE----AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
N V K+ +E A ++ ++LQ +PL ++ C L EE I
Sbjct: 100 NRVKAYSRKENSEEEPNALDVMFEALQPLTPLANEIRRC--LPSEEE------------I 145
Query: 128 LDRASEDLELIR-AERKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS L IR A R+ N L+S++ A Q ++T R R C+ +K
Sbjct: 146 SDDASPALRSIRRAMRQMNDKVHAQLNSMVNGSAKAYLQ-----DAVVTMRNGRYCLPVK 200
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A ++ + G+ + SS+G+T F+EP ++ NN L E E IL+ L+ +
Sbjct: 201 AEYRGQV-QGMIHDQSSTGSTLFIEPMAVIKLNNELRELEIKEEKEIEVILANLSGQAGV 259
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ ++ + + ++D FARA ++ DG P+L++ INI+ +HPLL
Sbjct: 260 EQEALESNLTLLTKLDFIFARAQLSKSYDGSEPVLNNHG------VINIKKGRHPLL--- 310
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ TV VPIDI++ + +++ITGPNTGG
Sbjct: 311 ---------------------DKKTV-----------VPIDIRLGQDFDLLIITGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KT+GL +LM ++GL++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 KTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDDVFADIGDEQSIEQSLSTFSAHMTNIV 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ + SLVL DE+G+GTDP+EG ALA ++L L + + TTHY++L
Sbjct: 399 SILKEANERSLVLFDELGAGTDPTEGAALAIAVLSNLHRQGIRTMATTHYSELKVFALST 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
EN EF++ETLRPTYR+L G G SNA I+ +G II+ A++
Sbjct: 459 PGVENGCCEFNVETLRPTYRLLIGIPGKSNAFAISAKLGLPEDIIEEARE 508
>gi|260437715|ref|ZP_05791531.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
gi|292809738|gb|EFF68943.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
Length = 791
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 265/509 (52%), Gaps = 52/509 (10%)
Query: 25 NQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+ T+A+ + L S + DI ++ S G L SE+ +V L + + +
Sbjct: 49 DTTAASSRIFAKGSLGFSGLTDIRPLIKSLEVGSSLGISELLSVAALLSVTGSAIRYDSN 108
Query: 85 AAELDGDSL-QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
+ E + D L +R++ L N L+++ +I CI + I D AS +L+ IR ++K
Sbjct: 109 SIETNTDVLSERFNML-------NPLSDILNEINRCIISETEI-ADDASTNLKDIRRQQK 160
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
E + S L + + ++ + ++T R R CV +KA ++ +P G+ + S++G+
Sbjct: 161 NVNERIKSELSHMISGSYRTY-LQDAVVTTRDGRYCVPVKAEYRSQVP-GMIHDQSNTGS 218
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T+F+EP V+ NN L E E + ILS L+A E+ D + E+D FA
Sbjct: 219 TFFIEPMSIVKLNNDLRELEIKESEEISVILSSLSAMAGNYTTELLTNYDILKELDFIFA 278
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+AGF+ G PI+ D INI+ +HPL+ S +
Sbjct: 279 KAGFSHSYKGSEPIMDC------DGKINIKKGRHPLIDSSKV------------------ 314
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VP+DI + ++ITGPNTGGKT ++KT+GL SLM ++GL+
Sbjct: 315 -----------------VPVDIYLGDGYEQLIITGPNTGGKTVTLKTIGLFSLMGQSGLH 357
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA ++ +L F+ I ADIGD QS+EQ+LSTFS H+ IV IL+ SLVL DE+ +G
Sbjct: 358 IPASDNSKLTVFNDIFADIGDEQSIEQSLSTFSSHMKNIVYILKKADSNSLVLFDELCAG 417
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG ALA SIL+ L + + TTHY++L ENA EF + +L PTYR
Sbjct: 418 TDPTEGAALAISILRTLHSKKITTIATTHYSELKIYALSTDGVENACCEFDVASLAPTYR 477
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+L G G SNA I+ +G +II+ A+
Sbjct: 478 LLIGIPGKSNAFAISGKLGLPSEIIENAK 506
>gi|379795514|ref|YP_005325512.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872504|emb|CCE58843.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 782
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 284/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ SE+ ++R ++ N + E D + +Y+ L
Sbjct: 65 LSGLSKVSALIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEEV--KYAILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 EKMNQLPVLTDLFQQINET--CDTYDLYDSASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A E++ + ++V+ +D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGNVA-VEKDALLVAEQVMGHLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL + A +N+ D+E
Sbjct: 295 PIFKEERTVYLPKAY------HPLL------NREAVVANTIEFMEDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y +
Sbjct: 549 EQVHDDLTKQYHQ 561
>gi|373857569|ref|ZP_09600310.1| MutS2 family protein [Bacillus sp. 1NLA3E]
gi|372452701|gb|EHP26171.1| MutS2 family protein [Bacillus sp. 1NLA3E]
Length = 785
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 253/499 (50%), Gaps = 55/499 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LS +E+ V T+ + + + + AE D L+
Sbjct: 65 LGGIFDIRAHIKRAAIGGMLSSNELMQVASTVHVSRQMKRFIEDVAEEDVS----IPILV 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKV 156
E + L ELE+ I ID + LD AS L +R++ R E LDS+++
Sbjct: 121 EFSEQIIVLAELEQSIKMAIDDNGEV-LDGASATLRSLRHQLRSKEARVREKLDSMIRSS 179
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
AQ + LIT R R + +K ++ GI + SSSG T F+EP+ VE N
Sbjct: 180 NAQKM----LSDALITIRNDRFVLPVKQEYRSHY-GGIIHDQSSSGQTLFIEPQSIVELN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + E E IL LTA +A+ + ++ ++ + E+D FA+A +A+ + P
Sbjct: 235 NELQGIRLKEEQEIQRILIELTAHVAEYQEDLATVVVVLTELDFMFAKARYAKRIKASKP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + + + + +HPL+ P+ V N
Sbjct: 295 TMNHEGRIFLNKA------RHPLI----------------PIDEVVAN------------ 320
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + + FD
Sbjct: 321 -------DITIGIDFSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQVPAFDGSEMAVFD 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA SI
Sbjct: 374 EVYADIGDEQSIEQSLSTFSSHMVNIVDILKKVDSNSLVLFDELGAGTDPQEGAALAISI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 LDEVYKRSAKVIATTHYPELKAYGYNREGVSNASVEFDVETLSPTYKLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I++ +G D +I+ A+ V
Sbjct: 494 ISRKLGLDESVIENARSHV 512
>gi|334118052|ref|ZP_08492142.1| MutS2 protein [Microcoleus vaginatus FGP-2]
gi|333460037|gb|EGK88647.1| MutS2 protein [Microcoleus vaginatus FGP-2]
Length = 909
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 205/650 (31%), Positives = 300/650 (46%), Gaps = 100/650 (15%)
Query: 11 IPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P + ++ +LL QT A L L I+DI L A LLS E+ A+
Sbjct: 44 LPIPATQAQTAELLAQTHEAYQLESRAGGALSFEGIQDIGTSLQRAELQGLLSGEELLAI 103
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL + + + DS L EL ELE++I CID + +
Sbjct: 104 ATTLAGARQLRRII--------DSQADVPTLKELAAQLRTYPELEQEIHRCIDDRAQVA- 154
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
DRA+ L IR + ++ + + +L+ + + Q+ + + LIT+R R + +KA K
Sbjct: 155 DRATPKLAGIRVQMRQLRDRIYQILQGILQR--QSNAVQEQLITQRSGRFVIPVKAPQKD 212
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S+SGAT ++EP V NN + E AEE A+ LT ++A + ++
Sbjct: 213 AIP-GIVHDSSASGATLYVEPHSTVNLNNQMRQFLRQEQAEEEAVRRALTEQVAAVKPDL 271
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDG------------VCPILSSQSHVSFDSSINIEGIK 296
L+ V +DLA A+A ++ W+ + P + + + E +
Sbjct: 272 DRLVVVVTTLDLAAAKARYSFWLQANPPKFIELGEPELAPKNPEKEDEEKEEKEDEEKEE 331
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVV 355
+ LL +LRS +PL + E FPV P+D+ + RVV
Sbjct: 332 NSQLLIRNLRSQITLRQLRHPLLVWQQQHEQ----------GFPVVPVDLTIGPHIRVVA 381
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGLA+LM+KAG+++ A+ LPWFD ILADIGD QSL+Q+LSTF
Sbjct: 382 ITGPNTGGKTVTLKTLGLAALMAKAGMFVAAREPVELPWFDNILADIGDEQSLQQSLSTF 441
Query: 416 SGHISRIVDILELVSRESLVLIDE----------------------------------IG 441
SGHI RI ILE++ +S +E I
Sbjct: 442 SGHIRRISRILEVLGNKSQAEGEETSNLPITNSQQQDQEVTDTQNTVSALPILKPKLQIP 501
Query: 442 SGTDPSEGVALATSILQYLRDRVG----------LAVVTTHY--------------ADLS 477
P LA L D VG LA+ Y +L
Sbjct: 502 KAQSPISNSQLAIPKSLVLLDEVGAGTDPSEGSALAIALLQYLAQHSLLTVATTHFGELK 561
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LK +D+RFENA+ EF +++PTYR+LWG G SNAL IAK +G I++ AQ V
Sbjct: 562 ALKYQDSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRLGLLASIVEEAQTYVGG 621
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSAS 587
+ Q + L +RRK E++AR A L + L+RE S A+
Sbjct: 622 ASQDVNQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKAA 666
>gi|257085338|ref|ZP_05579699.1| MutS 2 protein [Enterococcus faecalis Fly1]
gi|256993368|gb|EEU80670.1| MutS 2 protein [Enterococcus faecalis Fly1]
Length = 788
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKHAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|317132907|ref|YP_004092221.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
gi|315470886|gb|ADU27490.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
Length = 796
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 289/572 (50%), Gaps = 64/572 (11%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQL 59
G A +A P G SLE++++ L QT+ A L+ P ++D++ L A G
Sbjct: 28 GGARHARALTPSG-SLEDAREQLAQTADAVRLSTRFGDP-PFGGVQDVSDALQRAKIGAS 85
Query: 60 LSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
L ++ V R L + + W+ + AE + L + + L +L EEKI
Sbjct: 86 LQMGDLLRVARVLSVIRALVRWR---DGAEQETTCLDDF---FDALAPNKYL---EEKIT 136
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
I + D AS +L IR +R + + L K+ A + + ++T+R R
Sbjct: 137 AAI-LPEEEMADTASAELADIRRNIRRAGQRVREQLDKMVHSQRYAKFLQEAIVTQRGGR 195
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ ++A ++ +P G+ + S+SGAT F+EP VE +N L E E IL+ L
Sbjct: 196 FVIPVRAEYRSEVP-GLVHDTSASGATLFIEPMAVVEADNELKVLYVKEEKEIERILAAL 254
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+AE++ I + ++D FARA + M P H++ D I++ +H
Sbjct: 255 SAEVSTFADVIAQDVRTAEKLDFVFARARLSFAMKAGVP------HLADDGIIDLHRARH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL P D VPIDI++ +VIT
Sbjct: 309 PLL----------------P-------------------PDQAVPIDIRLGEPFDTLVIT 333
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KTLGL +LM+ +GL +P + +L +F+ +LADIGD QS+EQ+LSTFS
Sbjct: 334 GPNTGGKTVALKTLGLITLMAMSGLAVPVADDSKLSFFEQVLADIGDEQSIEQSLSTFSA 393
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ I+ IL SLVL+DE+GSGTDP+EG ALA +IL++LR R TTHYA+L
Sbjct: 394 HMTNIIGILHTCGTRSLVLLDELGSGTDPTEGAALAVAILEHLRLRGAKVAATTHYAELK 453
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+ EN + EF + TLRPTYR+L G G SNA I+ +G II RA+ L+
Sbjct: 454 LYALETPGVENGSCEFDVATLRPTYRLLIGVPGRSNAFAISARLGLYESIIVRAKALL-- 511
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAA 569
+ R ++ + L + R LE+ ART A
Sbjct: 512 ---SNEDTRFEQVVEGLEKNRLALEA-ARTEA 539
>gi|376260578|ref|YP_005147298.1| MutS2 family protein [Clostridium sp. BNL1100]
gi|373944572|gb|AEY65493.1| MutS2 family protein [Clostridium sp. BNL1100]
Length = 792
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 292/571 (51%), Gaps = 73/571 (12%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+K+L++T+ ++ +++ L I DI L G +LSP E+ + LRA +
Sbjct: 44 EKMLSETNDGVSCVLKRGSPPLGGITDIRMTLKRLDMGGVLSPGELLRLAGVLRAARRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + +LD + + L+ L++ LE+KI CI + I D AS L IR
Sbjct: 104 GYIND--KLDENKTNVVNELISCLESNQ---RLEQKIENCILSEDEIA-DNASPALSSIR 157
Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ K + L+S+++ Q F I + ++T R R + +K HK +P G+
Sbjct: 158 RQIKEQQASIKDKLNSIIRSTKYQKF----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP VE NN +L E E IL+ L+ + + ++ M +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLILPQLNANMSIM 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA+A A +CP ++ I I+ +HPLL
Sbjct: 273 ARLDFIFAKAKLAVDYKCICP------RINDTGKIIIKKGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K +PID + + +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DPQKV--------------------IPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL +PA + F+ I ADIGD QS+EQ+LSTFS H+ IVDIL V+ +SL+
Sbjct: 352 LMVQSGLLVPANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLI 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA SIL+ L + TTHY++L T ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILESLHQMGATTLATTHYSELKVYAISTTGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPE 541
ETLRPTYR+L G G SNA I+K +G II+R+++ +E+ R E
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSE 531
Query: 542 RQQHR-KSELYQSLMEERRK-LESQARTAAS 570
++ + ++E Y+ E +K LE Q R A+
Sbjct: 532 AEKEKMRAESYRQEAERLKKDLEDQKRRLAA 562
>gi|158320865|ref|YP_001513372.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
gi|229486331|sp|A8MHU4.1|MUTS2_ALKOO RecName: Full=MutS2 protein
gi|158141064|gb|ABW19376.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
Length = 790
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 283/544 (52%), Gaps = 59/544 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D++ L G L P ++ ++ TL A + L D Y +
Sbjct: 65 LGGIHDVSQYLRRTEIGSYLDPGQLLQLKETLAAARRMKTFLK-----DDKKESTYPIIQ 119
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
EL N + L +E+KI CI + + D AS +L IR R+ + +N D++ K+ + I
Sbjct: 120 ELGNNISSLKHIEDKIELCIISETELS-DNASPELRNIR--RQISSKN-DAIRNKLNSII 175
Query: 161 FQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
A + P+IT R+ R V +K H+ +P G+ + SSSGAT F+EP VE NN
Sbjct: 176 TSASNQKYLQDPIITMRQDRYVVPVKQEHRGNIP-GLIHDQSSSGATIFVEPMAVVELNN 234
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL + A IA+ +IK + E+D FA+ + M V P+
Sbjct: 235 QLKELRLKEQVEIERILMEIAAMIAERSDDIKSNQIILKELDFIFAKGKLSVEMRAVEPV 294
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L++ +S I+ +HPLL P V N+ M +G
Sbjct: 295 LNTNKKIS------IKNGRHPLL----------------PSNKVVPNT-MWLGE------ 325
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
DF +VITGPNTGGKT ++KTLGL +LM+++GL++PA +L FD
Sbjct: 326 DF------------HTLVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPADYGTKLAIFDQ 373
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LSTFS H++ IV+I++ V+ +SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 374 VFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTEQSLVLFDELGAGTDPTEGAALAMAIL 433
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
LR+ + V TTHY++L ENA+ EF + TL PTY++L G G SNA I
Sbjct: 434 NSLREMGTVTVATTHYSELKQYALSTEGVENASVEFDVNTLSPTYKLLIGVPGKSNAFEI 493
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
++ +G +IQR+++L+ R+ + +L Q++ + R E + AA L E
Sbjct: 494 SRKLGLSDFLIQRSKELL-----TREDIQFEDLLQNIEKNRSTAEKEKDEAARLRMETQK 548
Query: 578 LYRE 581
L E
Sbjct: 549 LREE 552
>gi|78185392|ref|YP_377827.1| MutS 2 protein [Synechococcus sp. CC9902]
gi|78169686|gb|ABB26783.1| MutS 2 protein [Synechococcus sp. CC9902]
Length = 814
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 284/538 (52%), Gaps = 61/538 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + Q+P +SL E+ + +T A L + L + D+ +L + G
Sbjct: 48 MGLESARATQLP--QSLAETLQRQAETVEMAVLDDLTEGGLSFRGVNDLRPVLLRCLKGG 105
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+ S E+ AV TL A + +++ + Q P+ L++ L +LE+++
Sbjct: 106 VASGEELLAVAGTLAAARKLRRQIDD---------QELRPVCTALIETMVTLPDLEQRLK 156
Query: 118 FCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
F ++ + + DRAS L +R + R+ + L L ++ A+ F + +I +
Sbjct: 157 FSLE-EGGRVADRASPPLAGLRQQWNGVRQERRDKLQELTRRYAS--F----LQDSVIAQ 209
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +KA + G + S+SG T F+EP+ + N V + EE +
Sbjct: 210 RHGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRV 268
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L+ L+ +A+ ER + L++ +L +DLA AR + +W+ V P L F +
Sbjct: 269 LAELSDLVAQDERVLNSLVEILLALDLALARGRYGRWLGAVPPHLLEDPEAPF----LLR 324
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
++HPLL+ RS + +P+ VPI + V + RV
Sbjct: 325 DLRHPLLIWQHKRS------SGSPV----------------------VPISVDVSAQLRV 356
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT S+K+LGL +LM++AG+ +P P LPW +LADIGD QSL+Q+LS
Sbjct: 357 VAITGPNTGGKTVSLKSLGLVALMARAGMLIPCSGRPSLPWCAQVLADIGDEQSLQQSLS 416
Query: 414 TFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
TFSGHI RI IL+ + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + T
Sbjct: 417 TFSGHIKRIGRILQALESGPVPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIAT 476
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++
Sbjct: 477 THFGELKALKYTDDRFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVL 534
>gi|345023410|ref|ZP_08787023.1| DNA mismatch repair protein [Ornithinibacillus scapharcae TW25]
Length = 779
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 266/526 (50%), Gaps = 63/526 (11%)
Query: 16 SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+LEE +L +T AAL + + P+ L I DI L AV G +LS SE + T+
Sbjct: 39 NLEEVNQLQEETDEAALVIRLNVPVPLGGIFDIRESLKRAVIGGVLSTSECLDIANTIYG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V K E L P+L+ L+++ L +LE +I CID + +D A+E
Sbjct: 99 GRQV-KDFVEG-------LDEELPILKGLVESITPLRDLELEIKSCIDDHGHV-MDSATE 149
Query: 134 DLELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR+ R E L+S + + + A +IT R R + +K ++
Sbjct: 150 KLRGIRSSIRTHESRVREKLESYTRTKSNMLSDA------IITIRNDRYVIPVKHEYRGA 203
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ GI + S+SG T FMEPK V+ NN L E E IL L+ IA+ E +
Sbjct: 204 I-GGIVHDQSASGQTLFMEPKAVVDLNNQLQELYAREKQEIERILRELSHRIAEDEGFLS 262
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + ID FARA + M P ++ Q I ++ +HPL+
Sbjct: 263 ENIRILASIDFIFARANLGRAMKAARPAMNDQG------IIKMQQARHPLI--------- 307
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
N E V + DI++ + +VITGPNTGGKT ++K
Sbjct: 308 --------------NIEDVVAN------------DIEIGRDYTTIVITGPNTGGKTVTLK 341
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
+GL +LM+++GL +PA + + F+ + ADIGD QS+EQNLSTFS H++ IVDIL+ V
Sbjct: 342 MVGLCTLMAQSGLQVPALDGCEMAVFEHVFADIGDEQSIEQNLSTFSSHMTNIVDILKHV 401
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+LVL DE+G+GTDP EG ALA +IL + R + TTHY +L NA
Sbjct: 402 DDRTLVLFDELGAGTDPQEGAALAMAILDEVVSRRARVIATTHYPELKAYGYNREDVINA 461
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ EF ++TL+PTYR+L G G SNA +I+K +G D II RA+ V
Sbjct: 462 SMEFDVQTLQPTYRLLIGVPGRSNAFDISKRLGLDEFIIDRAKSHV 507
>gi|389575981|ref|ZP_10166009.1| MutS2 family protein [Eubacterium cellulosolvens 6]
gi|389311466|gb|EIM56399.1| MutS2 family protein [Eubacterium cellulosolvens 6]
Length = 791
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 250/480 (52%), Gaps = 61/480 (12%)
Query: 56 SGQLLSPS---EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTEL 112
+G+LLS + E CA + +N A+ + DSL P+ +LL N LT L
Sbjct: 86 AGELLSIAGLLENCARAKAFGRHDN--------ADTEEDSL---DPIFDLL---NPLTPL 131
Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
+I CI + I D AS L IR + +N + + S L+ + + + +IT
Sbjct: 132 STEIRRCILSEDEIA-DDASSTLRQIRRQISQNGDKIHSQLQSMINGPLR-NALQDAVIT 189
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R CV +KA ++ +P G+ + SS+GAT F+EP V+ NN L E E
Sbjct: 190 MRDGRYCVPVKAENRSAVP-GMIHDQSSTGATLFIEPMAIVKLNNDIRELELKEQKEIEV 248
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+A A+ +I Y + + E+D FAR G A M P+ +++ IN+
Sbjct: 249 ILATLSASAAEHVEDISYDLQNLAELDFIFARGGLALDMKATEPVFNTEGR------INL 302
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ + VPID+ +
Sbjct: 303 RKARHPLIDKHRV-----------------------------------VPIDVHLGDSFD 327
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++++TGPNTGGKT S+KT+GL +LM +AGL++P + L F + ADIGD QS+EQ+L
Sbjct: 328 LLIVTGPNTGGKTVSLKTVGLLTLMGQAGLHIPTLDRSELSVFTEVYADIGDEQSIEQSL 387
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFS H++ IV +E R SLVL DE+G+GTDP+EG ALA +IL +L + + TTH
Sbjct: 388 STFSSHMTNIVSFIEKADRNSLVLFDELGAGTDPTEGAALAIAILSHLHRQGIRTMATTH 447
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y++L + ENA+ EF++ETL+PTYR+L G G SNA I+ +G II A+
Sbjct: 448 YSELKIFALSTDKVENASCEFNIETLQPTYRLLIGVPGKSNAFAISSKLGLPDYIIDDAK 507
>gi|414153028|ref|ZP_11409355.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455410|emb|CCO07257.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 783
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 268/520 (51%), Gaps = 59/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++ L +TS +++ PL +LS DI L +L+ E+ AV TL A +
Sbjct: 43 KRRLAETSEGRELLRLDPLAELSGWHDIRDALARVSRYAVLAAEELLAVGETLAASRRIK 102
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
K E + RY L E+ + +LE+ I I I D AS L IR
Sbjct: 103 KFFNEKS-------HRYPLLSEIAASLTQQPQLEKDILRAI-LPGGEIADHASPQLLQIR 154
Query: 140 A----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ R E ++S+++ Q + + +P++T R+ R + +K ++ +P GI
Sbjct: 155 RGILRAQNRIRERVESIIRAPENQKY----LQEPIVTVRQDRYVIPVKQEYRNQIP-GIV 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP V+ NN RL +E E IL+ L+ ++ +E+ + +
Sbjct: 210 HDQSASGATLFVEPLAVVDANNEVRRLMAAEKQEIQRILAELSQGVSAVAQELSLALQAL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E+D ARA ++ + P ++ S I I+ +HPLL G +
Sbjct: 270 AELDYIMARARYSLKLKAWSPQITEGS-----PYIYIKQGRHPLLPGDA----------- 313
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP I++ + +VITGPNTGGKT ++KT+GL +
Sbjct: 314 -------------------------VPATIELGKNFKTLVITGPNTGGKTVTLKTVGLFA 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++AGL++PA+ + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V +SLV
Sbjct: 349 LMTQAGLHIPAEAGTTMGVYKKIFADIGDEQSIEQSLSTFSSHMTNIVHILQQVDEDSLV 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA +IL+ L +R + TTHY++L ENA+ EF
Sbjct: 409 LLDELGAGTDPTEGAALARAILEELHNRGACTIATTHYSELKNYAYTTPGVENASVEFDA 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETLRPTYR+L G G SNA I+ +G I+ RA++ +
Sbjct: 469 ETLRPTYRLLIGRPGRSNAFEISARLGLRPDIVNRARQFL 508
>gi|222529627|ref|YP_002573509.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
gi|254766186|sp|B9MK78.1|MUTS2_ANATD RecName: Full=MutS2 protein
gi|222456474|gb|ACM60736.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
Length = 787
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 253/455 (55%), Gaps = 59/455 (12%)
Query: 127 ILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
ILD AS L+ IR ++ R +EN L+S+++ Q F + +P+IT R ++ +
Sbjct: 142 ILDTASSKLKEIR-DKIRKLENKIRDELNSMIRDPKIQRF----LQEPIITIRGEKLLLP 196
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KA + + GI + S++GAT F+EP VE +N L N E E IL +++ I
Sbjct: 197 VKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEISNQIKILKNQEKEEIERILQEISSLI 255
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A I+ ++E+D+ F +A +A+ M+ PI+++ IN++ +HPL+
Sbjct: 256 ASYCEVIETSFYALVELDIVFTKAIWAKEMNASKPIINASG------IINLKKARHPLIQ 309
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
D VPIDI + + V++ITGPNT
Sbjct: 310 -----------------------------------KDKVVPIDIHLGKDFDVLIITGPNT 334
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT+GL L+ ++G+++PA L F I ADIGD QS+ Q+LSTFS H+
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I++I + ++LVL+DEIG+GTDP EG ALA +IL+YL ++ + TTHY +L
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKVIATTHYGELKIFAQ 454
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----QKLV- 535
++ RFENA+ EF ++TL+PTYR+L G G SNAL I+ ++G D+ I++ A QK +
Sbjct: 455 QEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTID 514
Query: 536 -ERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
+R+ E +Q RK + ++ K E+QA AA
Sbjct: 515 LDRIINEMEQKRKEAEENLELAQKLKHEAQALKAA 549
>gi|433443934|ref|ZP_20409057.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus TNO-09.006]
gi|432001908|gb|ELK22775.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus TNO-09.006]
Length = 781
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 262/499 (52%), Gaps = 58/499 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D+ A G LSP E+ + T+RA + KK EA E D + Y+
Sbjct: 65 LGGIFDVRMQTKRASIGGTLSPHELLDIASTMRAARQL-KKFLEATEADLPHMIAYAA-- 121
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
L ELE++I CID + +LD AS+ L +R + + R + L+S+++
Sbjct: 122 ----QIVPLPELEQRIYHCID-ESGDVLDGASDRLRSLRQQLRTIEGRVRDKLESIIRSS 176
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+AQ + +IT R R + +K +++ GI + SSSGAT F+EP+ VE N
Sbjct: 177 SAQ----KTLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELN 231
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N +L E E ILS L+A + + I ++ + ++D FA+A +A+ + P
Sbjct: 232 NELQQLRVKEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKP 291
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + ++ + +HPL+ P
Sbjct: 292 AINERGYIRLIQA------RHPLI----------------P------------------- 310
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
SD VP DI++ +VITGPNTGGKT ++KT+GL ++M++AGL +PA + +L F
Sbjct: 311 SDEVVPNDIELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFR 370
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 371 AVYADIGDEQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAI 430
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + +R V TTHY +L NA+ EF +ETL PTY++L G G SNAL+
Sbjct: 431 LDEVHNRGARVVATTHYPELKAYGYNRRGVMNASVEFDIETLSPTYKLLIGIPGRSNALD 490
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I++ +G D II RA+ +
Sbjct: 491 ISRRLGLDEHIIARARTYI 509
>gi|261418293|ref|YP_003251975.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus sp. Y412MC61]
gi|319767747|ref|YP_004133248.1| MutS2 family protein [Geobacillus sp. Y412MC52]
gi|261374750|gb|ACX77493.1| MutS2 family protein [Geobacillus sp. Y412MC61]
gi|317112613|gb|ADU95105.1| MutS2 family protein [Geobacillus sp. Y412MC52]
Length = 792
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 274/528 (51%), Gaps = 64/528 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L +T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 48 LEEVAAWLEETDEAAAVLRLAGYAPLDGAV--DIRPHLKRAAIGGTLSPQELLEVAATSA 105
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 159 SDRLRSLRGQIRSLEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 274 LARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
LV ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 413 LVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 472
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 520
>gi|403384307|ref|ZP_10926364.1| MutS2 protein [Kurthia sp. JC30]
Length = 789
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 281/563 (49%), Gaps = 60/563 (10%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE+ Q+LL + AL++++ + + + I D+ A G +LSP E+ + T+RA
Sbjct: 41 LEKVQQLLAEMDEALSILRIKGSVPMGGIFDVRPHARRAQIGGMLSPKELMEISSTIRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ ++++ E E D + R + + LT L+ +I CID + +D AS+ L
Sbjct: 100 SRIFREFIEVVEADDEV--RIPLFVAKKEELPILTGLQHEINSCIDDNAKV-MDSASQTL 156
Query: 136 ELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
IR + + R + L SL + +A A + +IT R R + +KA ++
Sbjct: 157 RSIRTQLRTQEGRVRDRLASLTRGSSA----AKMLSDTIITIRNDRFVIPVKAEYRSHY- 211
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
G+ + S+SG T ++EP V+ NN L E AE IL L+A++ + + L
Sbjct: 212 GGVIHDQSASGQTLYIEPDAVVQANNEIQGLKVKEKAEVDRILMELSAKVQEVAHSLFVL 271
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ + EID+ A+A + Q P ++ + ++ + +HPLL
Sbjct: 272 VQILGEIDVVLAKAKYGQAHKCTMPKMNDRGYMKLTKA------RHPLL----------- 314
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
DV D V DI+ + +VITGPNTGGKT ++KT+
Sbjct: 315 ---------DV---------------DTAVANDIEFGDDVTAIVITGPNTGGKTVTLKTI 350
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL +PA + L F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 351 GLCTLMAQAGLPVPALDGSELAVFTQLFADIGDEQSIEQSLSTFSSHMVNIVDILNEFDH 410
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
+SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA+
Sbjct: 411 DSLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVVNASM 470
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF+++TL PTYR+L G G SNA I+K +G II+ A+ + H +
Sbjct: 471 EFNVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDNIIETAKSYT-----GTETHEVESMI 525
Query: 552 QSLMEERRKLESQARTAASLHAE 574
SL RR+ E A +A L AE
Sbjct: 526 ASLETSRRQAEKDAEESARLLAE 548
>gi|410667688|ref|YP_006920059.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105435|gb|AFV11560.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 793
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 275/557 (49%), Gaps = 67/557 (12%)
Query: 11 IPFGKSLE---ESQKLLNQ----TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPS 63
+P+ + LE E +++L + T A A L + D+A +L A+ G +L P
Sbjct: 28 VPYVRELEPATEVEEILARQAETTEACHAWRLCPELSFDGVADLAPLLRRALIGGVLEPQ 87
Query: 64 EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--D 121
++ + R TL+A + K L A G L R ++ C L+EKI CI D
Sbjct: 88 DLLSCRDTLQAGERLKKALLSA----GRELPRLQARARRIQECR---TLQEKINLCIQPD 140
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+ I D AS +L +R + + + LL ++ ++ + +P+ T R R V
Sbjct: 141 GE---ISDSASPELARLRQQIRTLQVRIRGLLDEILSKPEWNRYLQEPIYTVRGDRYVVP 197
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+K H+ P G+ ++S SGAT FMEP V N + + EE IL LT +
Sbjct: 198 VKQEHRSQFP-GLVHDLSGSGATVFMEPLPLVGPMNELMAKRTAAHREEQRILEELTKMV 256
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A I+ + + E+D A+ + + G P + S +HPLL
Sbjct: 257 AAFHDAIQENLRILGELDFILAKGHLSSKLKGNPPRFGDGRCLVLKSG------RHPLLR 310
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
G VP+D+ + + ++ITGPNT
Sbjct: 311 GKV------------------------------------VPLDLHLGRDFDCLIITGPNT 334
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT+GL +M++AGL++PA LP + ADIGD QS+EQ+LSTFSGH+
Sbjct: 335 GGKTVALKTVGLLVVMAQAGLHIPAGERTVLPVLQNVFADIGDEQSIEQSLSTFSGHMKN 394
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV IL+ V SLVL+DE+G+GTDP +G AL +IL L ++ L + TTH+++L
Sbjct: 395 IVRILDQVGEGSLVLLDELGAGTDPEQGAALGMAILDRLINKGALIIATTHFSELKIFAH 454
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R ENA+ EF TL+PTYR+ G G+SNA IA +G D ++++RA+ LRPE
Sbjct: 455 TRQRAENASVEFDSRTLQPTYRLSIGVPGESNAFEIAARLGLDSEVVERARSF---LRPE 511
Query: 542 RQQHRKSELYQSLMEER 558
Q S+L + L E++
Sbjct: 512 --QRELSDLIKHLKEDQ 526
>gi|442804258|ref|YP_007372407.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740108|gb|AGC67797.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 794
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 277/571 (48%), Gaps = 71/571 (12%)
Query: 18 EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE ++ L +T+ A+ +++ L I DI + A +G +L P E+ + LR
Sbjct: 41 EEIKRTLRETTDAVTCILRKGSPPLGGIHDIRPYIQRAEAGGMLYPGELLKIADVLRVSR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ +++ D L+ + + L LEE++ I+ + + D AS L
Sbjct: 101 NLKNYVSQ----DKMELEETNTVYVLCSGLGTDRTLEERLNQAIENEEELS-DYASPALA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +R + + L + + ++T R R + +KA ++ P G+
Sbjct: 156 AIRRDIRRMQDAVKDKLNSIIRSAQNRKIMQDAVVTLRGDRYVIPVKAEYRSQFP-GLVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+VS SGAT F+EP VE NN +L E E IL+ LT E+AK +K + +
Sbjct: 215 DVSQSGATIFVEPMAVVELNNEIRQLKIKEEREVERILTELTGEVAKISEMLKANVKLLA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
ID FA+A + + G P+L+ + + +HPL+ +
Sbjct: 275 LIDFVFAKARLSLDLKGTEPVLNKERRIVIKKG------RHPLI---------------D 313
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P VP+DI + + +VITGPNTGGKT ++KT+GL L
Sbjct: 314 PA--------------------VVVPVDISLGEDFTTMVITGPNTGGKTVTLKTMGLFVL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + + F + ADIGD QS+EQ+LSTFS H++ IV IL V SLVL
Sbjct: 354 MTQAGLHIPAAENSEMCVFTKVFADIGDEQSIEQSLSTFSAHMTNIVGILREVDENSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA +IL L R + TTHY++L NA EF +E
Sbjct: 414 FDELGAGTDPTEGAALAKAILDRLTKRGIRTMATTHYSELKIYAMTTPGVRNACCEFDVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE----------------RLRP 540
TLRPTYR+L G G SNA I+ +G D II+ A++ + RL
Sbjct: 474 TLRPTYRLLIGIPGRSNAFAISLRLGLDEGIIEEAKRFMRGEDIQFEELLSDIQKNRLET 533
Query: 541 ERQQHRK-------SELYQSLMEERRKLESQ 564
E+++ R L Q+ E+R+K E +
Sbjct: 534 EKERERAYRELKEIERLRQAAEEQRKKTEDE 564
>gi|256962011|ref|ZP_05566182.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|257089797|ref|ZP_05584158.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|293382380|ref|ZP_06628319.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|293389358|ref|ZP_06633816.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|312904147|ref|ZP_07763315.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|312907378|ref|ZP_07766369.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|312909995|ref|ZP_07768842.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|422689484|ref|ZP_16747596.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
gi|256952507|gb|EEU69139.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|256998609|gb|EEU85129.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|291080325|gb|EFE17689.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|291081245|gb|EFE18208.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|310626406|gb|EFQ09689.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|310632623|gb|EFQ15906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|311289268|gb|EFQ67824.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|315577532|gb|EFU89723.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
Length = 788
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|418324592|ref|ZP_12935826.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
gi|365225279|gb|EHM66524.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
Length = 783
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 258/500 (51%), Gaps = 55/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I ++ A G +L+ +E+ ++R ++ V N +K D + + Y L
Sbjct: 65 LSGLAQIKPLIRRAQIGGVLNVTELNTIKRLIQ-VQNQFKTFYAQLLEDDEEVVHYPILH 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNELPVLTDLYRTIHDKCDAHDL--YDHASTTLQSIRSKISSTSQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + SSSG T ++EP VE N
Sbjct: 182 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSSVVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LTAE+A ++ + + ++++ +ID A+A +A+ +
Sbjct: 237 NQISRLRNDEAVERERILTELTAEVA-ADADGCLIAEQIMGQIDFLTAKARYARKIKATK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + D S+ + HPLL +N+ DVE
Sbjct: 296 PEFTE------DRSVYLPKAFHPLL------DQETVVANTIEFAEDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M++AGL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQAGLLIPTLDGSKLGIF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV ILE ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 ENVYCDIGDEQSIEQSLSTFSSHMKNIVSILEEATQNSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+ D L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 435 ILDYVHDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G KII +A+ ++
Sbjct: 495 DISKKLGLGMKIISKAKTMI 514
>gi|257082629|ref|ZP_05576990.1| MutS 2 protein [Enterococcus faecalis E1Sol]
gi|256990659|gb|EEU77961.1| MutS 2 protein [Enterococcus faecalis E1Sol]
Length = 788
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|374604257|ref|ZP_09677223.1| MutS2 family protein [Paenibacillus dendritiformis C454]
gi|374390142|gb|EHQ61498.1| MutS2 family protein [Paenibacillus dendritiformis C454]
Length = 785
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 292/552 (52%), Gaps = 87/552 (15%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEI-------CAVRRTLRAVNNVWKKLTEAAELDGDSL 93
L+ ++DI G L A +LS +E+ A RRT R + V +
Sbjct: 65 LAGVKDIRGALKRARIQAMLSSTELWDISALLFAARRTKRHIAAVHE------------- 111
Query: 94 QRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMEN 148
+ PLL+ L + + +LEE I CID + I LD+AS +L IR E + R E
Sbjct: 112 EEAIPLLQDLAETISDQKQLEEDIRQCIDEQGEI-LDQASFELAAIRRELRIGETRIREK 170
Query: 149 LDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
L+++++ AA++ Q + LIT R R + +K ++ GI + S SGAT F+
Sbjct: 171 LEAMIRSSNAAKMLQ-----EQLITIRNDRYVIPVKQEYRSHY-GGIVHDQSGSGATLFI 224
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
EP+ V NN +L +++ EE I LS LT ++ ++Y V +D FA+
Sbjct: 225 EPEAIVAMNN---KLRETKLREEREIERILSRLTEQVGLLADVLEYDTGAVETLDFMFAK 281
Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
A A+ M P ++ + + + +HPL+ P
Sbjct: 282 ARLAREMKASLPRMNDRGFLKLRKA------RHPLI----------------P------- 312
Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
+D VPID+++ +++TGPNTGGKT ++KT+GL +LM+ +GL++
Sbjct: 313 ------------ADQVVPIDVELGNSYTSILVTGPNTGGKTVTLKTIGLLNLMAMSGLFI 360
Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
PA++ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ ILE ++ +SLVL+DE+G+GT
Sbjct: 361 PAEDGSQMCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGT 420
Query: 445 DPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
DP+EG ALA +IL+++ R+G +V TTHY++L + NA+ EF ++TLRPTYR
Sbjct: 421 DPAEGSALAIAILEHIH-RLGCRMVATTHYSELKAYAYERKGVINASMEFDVQTLRPTYR 479
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
+L G G SNA IA+ +G + II A+ V + R + SL + R K E+
Sbjct: 480 LLVGVPGRSNAFAIAERLGLPKPIIDHARGEV-----TEEDMRVETMIASLEDNRLKAEA 534
Query: 564 QARTAASLHAEI 575
+ TA+ L E+
Sbjct: 535 ERETASKLRMEL 546
>gi|307288101|ref|ZP_07568111.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|422704386|ref|ZP_16762196.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
gi|306500837|gb|EFM70155.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|315164284|gb|EFU08301.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
Length = 788
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|256965209|ref|ZP_05569380.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|307273312|ref|ZP_07554558.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
gi|256955705|gb|EEU72337.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|306510297|gb|EFM79321.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
Length = 788
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|256762410|ref|ZP_05502990.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|307277459|ref|ZP_07558551.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|422694899|ref|ZP_16752887.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
gi|256683661|gb|EEU23356.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|306505724|gb|EFM74902.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|315147901|gb|EFT91917.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
Length = 788
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|293336740|ref|NP_001168465.1| uncharacterized protein LOC100382240 [Zea mays]
gi|223948449|gb|ACN28308.1| unknown [Zea mays]
Length = 689
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 304/597 (50%), Gaps = 71/597 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E+SQ LL +T AA+ ++ + +D S ++ +A ++S G ++ E AV
Sbjct: 85 SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSL 144
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A +LD S R + L E + + L + I +D + D A
Sbjct: 145 MMFVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTA 203
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S +L R + +R L L+ K+ + + I R C+ +
Sbjct: 204 SPELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF- 260
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
DG+ L+ S +G+ +EP AV N+ E++ S + +A+ E +LS LT +I I+
Sbjct: 261 DGLLLSRSDAGS--MIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQN 317
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
L+ +++D ARA ++ DG P L V+ + +I+ I
Sbjct: 318 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWK 377
Query: 297 -------HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTV 329
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 378 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRV 437
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
L K D PVP+D + ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A
Sbjct: 438 SQLEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEP 494
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I + ESLVL+DE+G+GT+P EG
Sbjct: 495 VKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEG 554
Query: 450 VALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
AL S+L+ + L + TTH+ +L LK + FENA EF E L+PT++ILWG
Sbjct: 555 AALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGI 614
Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQHRKSELY 551
G SNA+NI + +G I++ +++L +ERL+ E QQH + Y
Sbjct: 615 PGRSNAINITERLGLPLDIVESSRRLLGTAGAEINALIMDMERLKQEYQQHLQEAQY 671
>gi|255975938|ref|ZP_05426524.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|307278476|ref|ZP_07559550.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
gi|255968810|gb|EET99432.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|306504819|gb|EFM74015.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
Length = 788
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|402303647|ref|ZP_10822737.1| MutS2 family protein [Selenomonas sp. FOBRC9]
gi|400378042|gb|EJP30906.1| MutS2 family protein [Selenomonas sp. FOBRC9]
Length = 785
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 263/520 (50%), Gaps = 60/520 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A++++Q Q I D+ L A G L E+ + T++ + NV K
Sbjct: 45 RLHAETAEAVSVLQMQAPPFGGIYDLRHTLQKATLGSTLEVEELREIMSTMQGMRNV-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
A+L L+ +E+L LE+ + ID + + D AS +L + E
Sbjct: 104 FFRDADLSLPLLKEKGVRIEILGM------LEKHLQNTID-EHGNLRDDASPELRRVTRE 156
Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E L ++L A Q FQ + ++T R R + +K ++ P G+
Sbjct: 157 MLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN ++ + E IL L+ EIA++ + +
Sbjct: 211 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSENCTILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+DL FARAG ++ M+ P + +V + +HPLL
Sbjct: 271 ELDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P D VPIDI++ V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------KDRVVPIDIELGRGFSVLLITGPNTGGKTVSMKTLGILAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV IL+ LVL
Sbjct: 350 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAESNDLVL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++L R + TTHYA L NA+ EF
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTA 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++
Sbjct: 470 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID 509
>gi|336234407|ref|YP_004587023.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
gi|335361262|gb|AEH46942.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 784
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 260/516 (50%), Gaps = 57/516 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ +AAL + PL I DI L G LSP E+ + T+ A +
Sbjct: 47 QEETDEAAAALRLRGHVPL--GGIVDIRASLKRVKIGGTLSPHELLDISSTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + LD ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+S+++ +AQ + +IT R R + +K ++ GI
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT +A + + +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P L+ + ++ + +HPL+ ++
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP DI++ E +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKEYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F I ADIGD QS+EQ+LSTFS H+ IV+IL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
TLRPTY++L G G SNA I+K +G +II+RA+
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLAERIIERAK 509
>gi|212638407|ref|YP_002314927.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus WK1]
gi|212559887|gb|ACJ32942.1| DNA mismatch repair protein, MutSB [Anoxybacillus flavithermus WK1]
Length = 836
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 278/545 (51%), Gaps = 63/545 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D+ A G LSP E+ + T+RA + KK EA E D + Y+
Sbjct: 120 LGGIFDVRMQTKRASIGGTLSPHELLDIASTMRAARQL-KKFLEATEADLPHMIAYAA-- 176
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
L ELE++I CID + +LD AS+ L +R + + R + L+S+++
Sbjct: 177 ----QIVPLPELEQRIYHCID-ESGDVLDGASDRLRSLRHQLRTIEGRVRDKLESIIRSS 231
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+AQ + +IT R R + +K +++ GI + SSSGAT F+EP+ VE N
Sbjct: 232 SAQ----KTLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELN 286
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N +L E E ILS L+A + + I ++ + ++D FA+A +A+ + P
Sbjct: 287 NELQQLRVKEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKP 346
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + ++ + +HPL+ P
Sbjct: 347 AINERGYIRLIQA------RHPLI----------------P------------------- 365
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
SD VP DI++ +VITGPNTGGKT ++KT+GL ++M++AGL +PA + +L F
Sbjct: 366 SDEVVPNDIELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFR 425
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 426 AVYADIGDEQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAI 485
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + +R V TTHY +L NA+ EF +ETL PTY++L G G SNAL+
Sbjct: 486 LDEVHNRGARVVATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGIPGRSNALD 545
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I++ +G D II RA+ + + + + SL + +++ E + A L E
Sbjct: 546 ISRRLGLDEHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEQAEKLRQEAE 600
Query: 577 DLYRE 581
L E
Sbjct: 601 QLRNE 605
>gi|326201810|ref|ZP_08191681.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
gi|325988410|gb|EGD49235.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
Length = 792
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 291/571 (50%), Gaps = 73/571 (12%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+K+L++T+ ++ +++ L I DI L G +L+P E+ + LRA +
Sbjct: 44 EKMLSETNDGVSCVLKRGSPPLGGITDIRLTLKRLDMGGVLNPGELLRLAGVLRAARRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + LD + L+ L++ LE+KI CI + I D AS L IR
Sbjct: 104 GYIND--RLDDNKTNVVHELISCLESNQ---RLEQKIDSCILSEDEIA-DSASPALSSIR 157
Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ K + L+S+++ Q F I + ++T R R + +K HK +P G+
Sbjct: 158 RQIKEQQASIKDRLNSIIRSTKYQKF----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP VE NN +L E E IL+ L+ + + ++ M +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLILPQLNANMSIM 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA+A A +CP+++ I I+ +HPLL
Sbjct: 273 ARLDFIFAKAKLAVDYKCICPVINDTG------KIIIKKGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K +PID + + +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DPQKV--------------------IPIDFWIGDKFSSLIVTGPNTGGKTVSLKTVGLFT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL +PA + F+ I ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ +SL+
Sbjct: 352 LMVQSGLLIPANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILDGVNNKSLI 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA SIL+ L + TTHY++L ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILESLHRMGATTLATTHYSELKVYAISTAGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPE 541
ETLRPTYR+L G G SNA I+K +G II+R+++ +E+ R E
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSE 531
Query: 542 RQQHR-KSELYQSLMEERRK-LESQARTAAS 570
++ + ++E Y+ E +K LE Q R A+
Sbjct: 532 AEKEKMRAESYRQEAERLKKDLEDQKRRLAT 562
>gi|123967774|ref|YP_001008632.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. AS9601]
gi|123197884|gb|ABM69525.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. AS9601]
Length = 803
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 203/643 (31%), Positives = 316/643 (49%), Gaps = 84/643 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T + ++ + + S + DI+ + G
Sbjct: 41 MGKQSILSFVIP--SEYEASKRLLNETVEINELEKNLDKSISFSGVFDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+++ SE+ + +T+ A N+ K L LD + S + L+ + N T K G
Sbjct: 99 VITSSELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNIETIF--KKG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS +L ++R E L KK+ +I I K L
Sbjct: 152 IESNGR---ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTT 199
Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
I R R + +K ++ K+ GI + SSSG T + EP+ V N L A
Sbjct: 200 IGDRYGRPVLAVKVNYVDKF---KGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITA 256
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L + ++ + + + + +L ++ A R+ +++W+ G P +S
Sbjct: 257 EEFKLLKKWSHVVSDNSKNLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS--- 313
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+ G HPLL+ + + PV +D +
Sbjct: 314 ---LIGFSHPLLIWEHKKKGAPP----------------------------PVAVDFYIN 342
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSL
Sbjct: 343 RNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSL 402
Query: 409 EQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
E+NLSTFSGHISRI IL+ + + S+VL+DEIGSGTDP EG ALA ++L+ ++
Sbjct: 403 EENLSTFSGHISRIKGILDSLDYKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSD 462
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ + TTHY D+ LK D+RFEN + F E+L+P Y + WG G SNAL+I+K IG D
Sbjct: 463 ITLATTHYGDIKALKYNDSRFENVSVAFDEESLKPKYILNWGIPGRSNALSISKRIGLDE 522
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA--EIM-DLYRED 582
I+ A L+P+ + S + + L EER K ++ A AA L A EI+ D + +
Sbjct: 523 SILNEA---ANYLKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN 578
Query: 583 STSASISVYRYQFAVTSTLSK----VDFDAIPNIDQCKDKGIH 621
I+ + Q S LSK + I I + +DK ++
Sbjct: 579 YEHQKINAQKIQELERSKLSKHIISAKKEVIDLIKKLRDKNVN 621
>gi|291524453|emb|CBK90040.1| MutS2 family protein [Eubacterium rectale DSM 17629]
Length = 792
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 269/541 (49%), Gaps = 72/541 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS-----LQRYSPLL 100
DI G LN+ +LL IC++ + V + + + D S ++ S L
Sbjct: 79 DIGGALNTT---ELL---RICSLLEVAKRVKAYGRNAMDNEKQDSLSGLFAGIEPVSALC 132
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ +K C L+E E I D AS +L IR + + + + L K+
Sbjct: 133 DEIKRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNS 178
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R C+ +KA K +P G+ + SS+G+T F+EP V NN
Sbjct: 179 TTRTYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELK 237
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
L E E IL+ L+ ++A + ++ + + E+D FA+A A+ +GV P ++
Sbjct: 238 ELFIKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPEFNT 297
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
+ H INI +HPLL D +N
Sbjct: 298 EGH------INIRKGRHPLL--------------------DAKNV--------------- 316
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
VPID+++ E + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + A
Sbjct: 317 VPIDVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFA 376
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QS+EQ+LSTFS H++ IV ILE SL L DE+ SGTDP+EG ALA SIL L
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRL 436
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+ + TTHY++L ENA EF++ETL PTYR+L G G SNA I+
Sbjct: 437 HQYGAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSK 496
Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+G D II+ A+ R +L SL +R+ +E + S AEI L +
Sbjct: 497 LGLDENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKK 551
Query: 581 E 581
+
Sbjct: 552 Q 552
>gi|394991851|ref|ZP_10384649.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
gi|393807396|gb|EJD68717.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
Length = 785
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 267/522 (51%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG S+ PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 DVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|384547383|ref|YP_005736636.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|417904179|ref|ZP_12548009.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
gi|298694432|gb|ADI97654.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|341848002|gb|EGS89171.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
Length = 782
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 286/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ N + E D D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEDV--KYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|422728993|ref|ZP_16785399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
gi|315150623|gb|EFT94639.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
Length = 788
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 191/579 (32%), Positives = 294/579 (50%), Gaps = 83/579 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA---VN 76
Q LN+T L + + + + + +E+I + G L+ E+ V R L +
Sbjct: 44 QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTLELT 103
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ +L+E E+D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSEN-EVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALK 155
Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR +R+ E LDS+++ A+ + L+T R R + +K +K +
Sbjct: 156 AIRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-G 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIK 249
G+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI
Sbjct: 210 GVVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREIT 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 267 HNAYVIGKLDFINAKARLGKELKAVVPEVSQANHVVFKQA------RHPLL--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
NP K+ V DI + E + +VITGPNTGGKT ++K
Sbjct: 312 ------NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 346 TLGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKV 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA
Sbjct: 406 DHQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINA 465
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E
Sbjct: 466 SMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNE 520
Query: 550 LYQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ + L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 521 MIEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|257086832|ref|ZP_05581193.1| MutS 2 protein [Enterococcus faecalis D6]
gi|422722610|ref|ZP_16779160.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|424673309|ref|ZP_18110252.1| MutS2 family protein [Enterococcus faecalis 599]
gi|256994862|gb|EEU82164.1| MutS 2 protein [Enterococcus faecalis D6]
gi|315027355|gb|EFT39287.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|402353119|gb|EJU87955.1| MutS2 family protein [Enterococcus faecalis 599]
Length = 788
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|257416014|ref|ZP_05593008.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|300860265|ref|ZP_07106352.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|384513156|ref|YP_005708249.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|422733668|ref|ZP_16789970.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|422738643|ref|ZP_16793838.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|428766910|ref|YP_007153021.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|430360426|ref|ZP_19426273.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|430368259|ref|ZP_19428131.1| MutS 2 protein [Enterococcus faecalis M7]
gi|257157842|gb|EEU87802.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|295112922|emb|CBL31559.1| MutS2 family protein [Enterococcus sp. 7L76]
gi|300849304|gb|EFK77054.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|315145717|gb|EFT89733.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|315160196|gb|EFU04213.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|327535045|gb|AEA93879.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|427185083|emb|CCO72307.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|429512902|gb|ELA02497.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|429516421|gb|ELA05913.1| MutS 2 protein [Enterococcus faecalis M7]
Length = 788
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|256618984|ref|ZP_05475830.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
gi|256598511|gb|EEU17687.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
Length = 788
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDTLVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|385265748|ref|ZP_10043835.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
gi|385150244|gb|EIF14181.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
Length = 785
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 267/522 (51%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI +
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAH 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEASVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|323694011|ref|ZP_08108195.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|355625337|ref|ZP_09048200.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
gi|323501947|gb|EGB17825.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|354821364|gb|EHF05752.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
Length = 800
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 289/572 (50%), Gaps = 68/572 (11%)
Query: 16 SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TL 72
SLEE ++ +T+ AA + L ++D+ G L G L+ E+ AV T+
Sbjct: 39 SLEEIRRNQTETTDAATRVRMKGSLSFGGVKDVRGSLKRLEIGSSLNIIELLAVSSLLTV 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + + E +EL DSL E+ + LT + +I CI + + D AS
Sbjct: 99 TARAKAYGR-REESELPDDSLD------EMFRTLEPLTPVNTEIKRCIISED-DVSDDAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L +R K R L+S+L A + +A +IT R R C+ +K+ +K
Sbjct: 151 PGLSKVRKSMKIIAGRVHTQLNSVLNSSRAYLQEA------VITMRDGRYCLPVKSEYKN 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+G+T F+EP V+ NN L E E +L+ L+ E+ I
Sbjct: 205 QVP-GMVHDQSSTGSTIFIEPMAVVKLNNELRELEIQEKREIEFVLTALSGELVPYTDTI 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + ++D FA+A ++ + P +++ + INI+ +HPLL
Sbjct: 264 ALNLELLAKLDFIFAKAALSRHFNCTEPKFNNRRY------INIKDGRHPLL-------- 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P + VPI+I + + ++++TGPNTGGKT S+
Sbjct: 310 -------DPKQV--------------------VPINIYLGDQFDLLIVTGPNTGGKTVSL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 343 KTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQ 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL L DE+G+GTDP+EG ALA ++L +L + + TTHY++L EN
Sbjct: 403 ADSNSLCLFDELGAGTDPTEGAALAIAVLSFLHNMSCRTMATTHYSELKVYALTTPGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A EFSLETLRPTYR+L G G SNA I+K +G II+ A+K + E++
Sbjct: 463 ACCEFSLETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKKHI-----EQEDESFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+L L + R +E + AS ++ L R
Sbjct: 518 DLLADLEDNRVTIEKERAEIASYKEQVAILKR 549
>gi|356498910|ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
Length = 792
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 303/619 (48%), Gaps = 83/619 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQL- 59
+G ++ ++ EES KLL +T+AA+ M + L L A ++ +A+
Sbjct: 62 LGRQALKDQLWSLNQTFEESLKLLEETNAAVEMNKHGTLRLHLGHLDAMLVKTAIQHARR 121
Query: 60 ---LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
+S E A+ L+ V L + D D R+ PL E++ L + I
Sbjct: 122 SIPVSGYEARAIVALLQCAEIVQGDLKAVIKEDKDWHNRFMPLTEVIMEFVINRSLIKAI 181
Query: 117 GFCIDCKLLIILDRASEDLELIRAERK---RNMENL-DSLLK--KVAAQIFQAGGIDKPL 170
+D + I D AS L+ R + + R ++ L +S+++ K + ID
Sbjct: 182 EQVVD-EDGSIKDSASPALKQARQQVQVIERKVQQLIESIIRNEKSETSTLEVNNID--- 237
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
R CV + + K G+ L+ S SG +EP AV N+ R + + E
Sbjct: 238 -----GRWCVRVDSGQKTSF-KGLLLS-SGSGVGSTIEPLSAVPLNDELQRARSLVVKAE 290
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL-------SSQSH 283
+L LT ++ +I+ ++ ++E+D+ ARA + G P + SS +
Sbjct: 291 ADVLLALTKKMQLDLDDIEKTLNSLVELDVINARATYGLSFGGSSPHIFLPDRSSSSTAE 350
Query: 284 VSFDSSINIEG--------------IKHPLLLGSSLRSLSAASSNSNPLKSD--VENSEM 327
S N+ G HPLLL L A N N SD ++N+
Sbjct: 351 AFLPRSENLYGPLPSKREWTLYLLKAYHPLLLQRHKEKLRKAKKNVNLATSDAALDNAP- 409
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
PVP+D V +TRV+VITGPNTGGKT +KT+GLA++M+K+GLY+ A
Sbjct: 410 ------------PVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLAS 457
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
++PWFD + ADIGD QSL Q+LSTFSGH+ +I +I + +SLVL+DE+G+GT+P
Sbjct: 458 ESAQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPL 517
Query: 448 EGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
EG AL ++L+ + +D L + TTH+ +L LK D FENA EF L+PTY++LW
Sbjct: 518 EGAALGMALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLW 577
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQ-------- 544
G G SNA+NIA+ +G ++ A+ L +ERL+ E Q+
Sbjct: 578 GVPGRSNAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHY 637
Query: 545 --HRKSELYQSLMEERRKL 561
H + LY SL+ RRK+
Sbjct: 638 LRHSRG-LYNSLLNTRRKI 655
>gi|291542202|emb|CBL15312.1| MutS2 family protein [Ruminococcus bromii L2-63]
Length = 787
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 291/568 (51%), Gaps = 74/568 (13%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L++ ++LL QT A+A+ + + +G L A +G L+ E+ +V TLR +
Sbjct: 39 LKKVEQLLQQTDDAVALSGRFGAPSFGGAGNCSGHLRRAQAGGCLTTGELLSVASTLRTI 98
Query: 76 NNV--WKKLTE--AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
V W + A+ LDG +S L+ + FL E+KI I + I D+A
Sbjct: 99 RTVKEWHARSGGGASSLDG----YFSGLV----SNKFL---EDKITSAIISEEEIS-DKA 146
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHK 187
S L IR R + S ++V +I + K L +T+R R V +++ +
Sbjct: 147 SPVLSDIR----RKIRTASSKAREVLDKIIHSSTYIKYLQDTIVTQRDGRYVVPVRSECR 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SSSGAT F+EP G V+ NN L + E E IL L+A
Sbjct: 203 GNVP-GLVHDTSSSGATVFIEPMGVVQANNDIKLLQSKEEQEIERILFELSANAGDFADS 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I + +++++L FA+A A M PI++ + + + +HPL+
Sbjct: 262 IIHSYKNLVQLNLIFAKADLAYSMKASKPIMNDRGMIELKQA------RHPLI------- 308
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ N + VP+D+ + E +VITGPNTGGKT +
Sbjct: 309 ------DKNKV----------------------VPVDVMLGKEFDTLVITGPNTGGKTVT 340
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM+ GL +P ++ L F +L DIGD QS+EQ+LSTFSGH++ IV I++
Sbjct: 341 LKTIGLLTLMAMCGLLVPCADNSELSVFRRVLVDIGDEQSIEQSLSTFSGHMTNIVQIIK 400
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
L + SL LIDE+G+GTDP EG ALA +IL+ LRD+ TTHYA+L + E
Sbjct: 401 LANAGSLCLIDELGAGTDPVEGAALAIAILERLRDKHAKIASTTHYAELKEFALRTPGVE 460
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
N + EF + TL+PTYR+L G G SNA I+K +G D +II RA +LV ++R+
Sbjct: 461 NGSCEFDVATLKPTYRLLIGVPGKSNAFAISKRLGIDDEIISRASELVS------NENRQ 514
Query: 548 SELYQSLMEERRK-LESQARTAASLHAE 574
E +E+RR+ LE Q A L A+
Sbjct: 515 FEDVVEKLEKRRQSLEKQLENANRLTAK 542
>gi|229545911|ref|ZP_04434636.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256853039|ref|ZP_05558409.1| MutS2 protein [Enterococcus faecalis T8]
gi|307291392|ref|ZP_07571276.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
gi|229308979|gb|EEN74966.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256711498|gb|EEU26536.1| MutS2 protein [Enterococcus faecalis T8]
gi|306497623|gb|EFM67156.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
Length = 788
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|323485118|ref|ZP_08090470.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
gi|323401548|gb|EGA93894.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
Length = 800
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 289/572 (50%), Gaps = 68/572 (11%)
Query: 16 SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TL 72
SLEE ++ +T+ AA + L ++D+ G L G L+ E+ AV T+
Sbjct: 39 SLEEIRRNQTETTDAATRVRMKGSLSFGGVKDVRGSLKRLEIGSSLNIIELLAVSSLLTV 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + + E +EL DSL E+ + LT + +I CI + + D AS
Sbjct: 99 TARAKAYGR-REESELPDDSLD------EMFRTLEPLTPVNTEIKRCIISED-DVSDDAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L +R K R L+S+L A + +A +IT R R C+ +K+ +K
Sbjct: 151 PGLSKVRKSMKIIAGRVHTQLNSVLNSSRAYLQEA------VITMRDGRYCLPVKSEYKN 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+G+T F+EP V+ NN L E E +L+ L+ E+ I
Sbjct: 205 QVP-GMVHDQSSTGSTIFIEPMAVVKLNNELRELEIQEKREIEFVLTALSGELVPYTDTI 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + ++D FA+A ++ + P +++ + INI+ +HPLL
Sbjct: 264 ALNLELLAKLDFIFAKAALSRHFNCTEPKFNNRRY------INIKDGRHPLL-------- 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P + VPI+I + + ++++TGPNTGGKT S+
Sbjct: 310 -------DPKQV--------------------VPINIYLGDQFDLLIVTGPNTGGKTVSL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 343 KTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQ 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL L DE+G+GTDP+EG ALA ++L +L + + TTHY++L EN
Sbjct: 403 ADSNSLCLFDELGAGTDPTEGAALAIAVLSFLHNMSCRTMATTHYSELKVYALTTPGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A EFSLETLRPTYR+L G G SNA I+K +G II+ A+K + E++
Sbjct: 463 ACCEFSLETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKKHI-----EQEDESFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+L L + R +E + AS ++ L R
Sbjct: 518 DLLADLEDNRVTIEKERAEIASYKEQVAILKR 549
>gi|312900671|ref|ZP_07759968.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
gi|311292152|gb|EFQ70708.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
Length = 788
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|424759532|ref|ZP_18187194.1| MutS2 family protein [Enterococcus faecalis R508]
gi|402404409|gb|EJV37027.1| MutS2 family protein [Enterococcus faecalis R508]
Length = 788
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 292/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKCLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKKAYQ 558
>gi|423072092|ref|ZP_17060854.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
gi|361857227|gb|EHL09076.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
Length = 789
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 278/554 (50%), Gaps = 73/554 (13%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T +++ PL + +I ++ + G L+ E+ +R TL+A V + L
Sbjct: 49 LEETGEGKDILRINPLFSVRGAREIRPLVERCLKGGTLTTDELLQIRDTLKAARVVKQGL 108
Query: 83 TEA-AELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELI 138
E AE+ P L+ +++ +EE+I CI D + + D+AS L +
Sbjct: 109 QEGKAEV---------PHLKGIMEQVILPKGIEEEITRCITEDGQ---VADQASSVLADL 156
Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + R E LD +++ A Q + P++T+R R V +K ++ GI
Sbjct: 157 RRSISRLQTRIRETLDGIIRNPAYQKI----LQDPIVTQRSERYVVPVKQEYRQSF-QGI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT ++EP V N + E E IL LL+A + I +
Sbjct: 212 VHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSARVEGEAEAIADAHEA 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D A+A ++ M+ PIL+ + +S + +HPLL G
Sbjct: 272 LARVDFILAKARLSEEMNAGAPILTEKQEISLVQA------RHPLLTGKV---------- 315
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VP+ I++ VV+TGPNTGGKT ++KT+GL
Sbjct: 316 --------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+ M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I+E SL
Sbjct: 350 AAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L TR ENA+ EF
Sbjct: 410 ILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFD 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
ETLRPTYR+L G G SNA IA +G ++ RA+ V ER+ ++L ++L
Sbjct: 470 SETLRPTYRLLIGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIENL 524
Query: 555 MEERRKLESQARTA 568
+ +R+++ + R A
Sbjct: 525 EDTQREIDLEKRRA 538
>gi|110803296|ref|YP_699161.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens SM101]
gi|122956595|sp|Q0SRU6.1|MUTS2_CLOPS RecName: Full=MutS2 protein
gi|110683797|gb|ABG87167.1| MutS2 family protein [Clostridium perfringens SM101]
Length = 786
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G II+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|220928895|ref|YP_002505804.1| MutS2 family protein [Clostridium cellulolyticum H10]
gi|254766596|sp|B8I1Z8.1|MUTS2_CLOCE RecName: Full=MutS2 protein
gi|219999223|gb|ACL75824.1| MutS2 family protein [Clostridium cellulolyticum H10]
Length = 792
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 293/571 (51%), Gaps = 73/571 (12%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+K+L++T+ ++ +M+ L I DI L G +L+P E+ + LRA +
Sbjct: 44 EKMLSETNDGVSCIMRRGSPPLGGITDIRMSLKRLDMGGVLNPGELLRLAGVLRAARRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + +LD ++ L+ L++ LE+KI CI + I D AS L IR
Sbjct: 104 GYIND--KLDENNASVVKELISCLESNQ---RLEQKIDNCILSEDEIA-DNASPALSSIR 157
Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ K + L+S+++ Q + I + ++T R R + +K HK +P G+
Sbjct: 158 RQIKEQQASIKDKLNSIIRSTKYQKY----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP VE NN +L E E IL+ L+ + + ++ M +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLVLPQLNANMSIM 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA++ A + +CP ++ I I+ +HPLL
Sbjct: 273 ARLDFIFAKSKLAIDYNCICP------KINDTGKIIIKKGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P VPID + + +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DP--------------------KIVVPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL +PA + + F+ I ADIGD QS+EQ+LSTFS H+ IVDIL V+ +SL+
Sbjct: 352 LMMQSGLLVPANDGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLI 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA SIL+ L + TTHY++L T ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILECLHQMGATTLATTHYSELKVYAISTTGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPE 541
ETLRPTYR+L G G SNA I+K +G II+R+++ +E+ R E
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSE 531
Query: 542 RQQHR-KSELYQSLMEERRK-LESQARTAAS 570
++ + ++E Y+ E +K LE Q R A+
Sbjct: 532 AEKEKMRAESYRQEAERLKKDLEDQKRRLAA 562
>gi|89893029|ref|YP_516516.1| hypothetical protein DSY0283 [Desulfitobacterium hafniense Y51]
gi|219666299|ref|YP_002456734.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
gi|89332477|dbj|BAE82072.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536559|gb|ACL18298.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
Length = 789
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 278/554 (50%), Gaps = 73/554 (13%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T +++ PL + +I ++ + G L+ E+ +R TL+A V + L
Sbjct: 49 LEETGEGKDILRINPLFSVRGAREIRPLVERCLKGGTLTTDELLQIRDTLKAARIVKQGL 108
Query: 83 TEA-AELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELI 138
E AE+ P L+ +++ +EE+I CI D + + D+AS L +
Sbjct: 109 QEGKAEV---------PHLKGIMEQVILPKGIEEEITRCITEDGQ---VADQASSVLADL 156
Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + R E LD +++ A Q + P++T+R R V +K ++ GI
Sbjct: 157 RRSISRLQTRIRETLDGIIRNPAYQKI----LQDPIVTQRSERYVVPVKQEYRQSF-QGI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT ++EP V N + E E IL LL+A + I +
Sbjct: 212 VHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSARVEGEAEAIADAHEA 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D A+A ++ M+ PIL+ + +S + +HPLL G
Sbjct: 272 LARVDFILAKARLSEEMNAGAPILTEKQEISLVQA------RHPLLTGKV---------- 315
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VP+ I++ VV+TGPNTGGKT ++KT+GL
Sbjct: 316 --------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+ M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I+E SL
Sbjct: 350 AAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L TR ENA+ EF
Sbjct: 410 ILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFD 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
ETLRPTYR+L G G SNA IA +G ++ RA+ V ER+ ++L ++L
Sbjct: 470 SETLRPTYRLLIGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIENL 524
Query: 555 MEERRKLESQARTA 568
+ +R+++ + R A
Sbjct: 525 EDTQREIDLEKRRA 538
>gi|327475225|gb|AEA77207.1| MutS2 [Bacillus aquimaris]
Length = 786
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 292/588 (49%), Gaps = 60/588 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQL 59
+GHA V + +P EE L +T A+ +++ + L I DI + A G +
Sbjct: 26 LGHARVS-SLLP-SVEYEEIVHLHEETDEAMTILRLKGHAPLGGIFDIRPHVKRAQIGGM 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+PSE+ V T+RA +KLT+ E + L + L LE+ I
Sbjct: 84 LAPSELVQVASTIRA----SRKLTKFVEELLEEEVEIPLLENKMNTVIPLPYLEQNIRKV 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+D I LD ASE L IR + + N + L+K+ + +IT R R
Sbjct: 140 VDDNGEI-LDSASETLRSIRTQLRSNESRIREKLEKMTRSSNAQKMLSDAIITIRNDRYV 198
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K ++ GI + SSSG T F+EP+ V NN L E E IL L+
Sbjct: 199 IPVKQEYRGHY-GGIIHDQSSSGQTLFIEPEAIVALNNQLRELRLKEQTEIEKILLALSV 257
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ ++ E+ ++ + ++D F +A F + + G PI++++ + + + +HPL
Sbjct: 258 EVQEAAEELLLIVSILSDVDFMFTKAKFGRSIKGSKPIINNEGRIKLNKA------RHPL 311
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
L P++ V N DI++ E +VITGP
Sbjct: 312 L----------------PIEEAVAN-------------------DIELGKEFSSIVITGP 336
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL ++M++AGL +PA + + F I ADIGD QS+EQ+LSTFS H+
Sbjct: 337 NTGGKTVTLKTLGLTNMMAQAGLPIPALDDSEVGIFRSIYADIGDEQSIEQSLSTFSSHM 396
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
IV+ILE V ESLVL DE+G+GTDP EG ALA SIL + + V TTHY +L
Sbjct: 397 VNIVEILEKVDHESLVLFDELGAGTDPQEGAALAISILDEVHGKGARVVATTHYPELKAY 456
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ------- 532
NA+ EF +ETL PTY++L G G SNA I+K +G +I RA+
Sbjct: 457 GYNREGVVNASVEFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDSVILRAKSHIGTDT 516
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQA-RTAASLHAEIMDLY 579
K VE + +++R+ + +EE +L QA + + ++M+ Y
Sbjct: 517 KEVENMIASLEENRRQ--GEKELEEAHELLRQAEKMHKDMQKQMMEYY 562
>gi|422685288|ref|ZP_16743509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
gi|315029974|gb|EFT41906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
Length = 788
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 81/578 (14%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYR 580
+ L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|255526069|ref|ZP_05392992.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296187117|ref|ZP_06855515.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
gi|255510255|gb|EET86572.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296048311|gb|EFG87747.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
Length = 787
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 277/545 (50%), Gaps = 66/545 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+ D+ ++ A G L P ++ + LRA + ++ E +G + L +
Sbjct: 68 VYDVREGISRAGKGSTLMPGQLLKIAAILRAARRFQEYISHKEEEEG-----FRVLENIS 122
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR-AERKRN---MENLDSLLKKVAAQ 159
+ L +E+ I I+ + + DRAS L IR A + +N + ++SL++ +
Sbjct: 123 QGIIPLKNIEDHIFMSIESEEQV-SDRASTALYNIRKALKDKNSSVRDRVNSLIRTYSDY 181
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ L T R R + ++A HK +P G+ + SSSGAT ++EP G V NN
Sbjct: 182 L------QDNLYTMRGDRYVLPVRAEHKGAVP-GLVHDQSSSGATLYIEPMGLVNLNNEI 234
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L E AE IL+ L+ EI S ++ D + E+D FA+A FA ++ P
Sbjct: 235 KELMLKEKAEVDRILAYLSNEIYGSIIAVRNDADIIWELDFIFAKAKFASELNCTAP--- 291
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
V+ + I+I KHPL+ +
Sbjct: 292 ---KVNDEGIIDIVQGKHPLIDRKVV---------------------------------- 314
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VP+D+ + +VITGPNTGGKT ++KT+GL +M+ +GL +PA+ + + +F +
Sbjct: 315 -VPLDVYLGKGFTSLVITGPNTGGKTVTLKTVGLLHIMALSGLMIPARENSTVSFFKEVF 373
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H++ IV+I+ ESLVL DE+G+GTDP+EG ALA SIL+
Sbjct: 374 ADIGDEQSIEQSLSTFSSHMTNIVNIINKADDESLVLFDELGAGTDPTEGAALAVSILEN 433
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
L+ R V TTHY++L K ENA+ EF +ETLRPTYR+L G G SNA I++
Sbjct: 434 LKSRGCRIVATTHYSELKVYALKVNGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISR 493
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEIM 576
+G II A+ E + E Q +L + L E+ K E+ AR A L A+I
Sbjct: 494 RLGLADYIIHDAK---ENINSETLQF--EDLIEDLQEKSVKAEANAREAEMLKLEAAKIK 548
Query: 577 DLYRE 581
D Y E
Sbjct: 549 DKYEE 553
>gi|418993763|ref|ZP_13541400.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
gi|377746922|gb|EHT70892.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
Length = 782
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 289/556 (51%), Gaps = 74/556 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV---WKKLTEAAELDGDSLQRYS 97
LS + ++ ++ A G +L+ SE+ ++R ++ N +K+L E D +Y
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYKQLVEE-----DEGVKYP 119
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLL 153
L + + LT+L ++I C + D AS +L+ IR++ +R +NLD ++
Sbjct: 120 ILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177
Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP V
Sbjct: 178 KSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVV 232
Query: 214 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMD 272
E NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ +
Sbjct: 233 EMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIK 291
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
G PI D ++ + HPLL N E + +
Sbjct: 292 GTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVIAN- 321
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L
Sbjct: 322 ---------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQL 370
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG AL
Sbjct: 371 SVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAAL 430
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G G S
Sbjct: 431 AMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRS 490
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------A 565
NA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 491 NAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLV 545
Query: 566 RTAASLHAEIMDLYRE 581
+ A +H ++ Y++
Sbjct: 546 KEAEQVHDDLSKQYQQ 561
>gi|33860777|ref|NP_892338.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33633719|emb|CAE18676.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 803
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 299/597 (50%), Gaps = 79/597 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + +++IP E S++LL +T L + + S + DI+ + G
Sbjct: 41 MGENAILESEIP--TEYEISRRLLQETIEINELEKTLDKSISFSGVFDISKNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+++ SE+ + T+ A ++ K L LD ++ S L L + N ++E+ +
Sbjct: 99 VINSSELLEIAETISAAKDLKKIL-----LDFEARPFISSFLNRLIDHN---QIEKILKN 150
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK-------PLI 171
I+ I DRAS+ L +R D L KK +I I K +I
Sbjct: 151 GIESNGRI-SDRASQKLANLRQ---------DLLSKKSERRILVDKFIQKNINYIQDTII 200
Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEI 227
R R V IK GI + S+SG T ++EP+ V N ME R++
Sbjct: 201 GDRYGRPVVAIKVQFGEKFK-GIIHDSSASGNTIYLEPESIVFKGNKIASMEARVA---- 255
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
EE +L + ++ +++ + + D +L + A R+ ++ W+ G PI+ + +
Sbjct: 256 GEEFKLLKEWSQIVSDNDKSLIEMSDILLRTEHALIRSRYSNWIGGNAPIVEN------N 309
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
+N+ G HPLL+ + + + PV ID +
Sbjct: 310 PIVNLIGFSHPLLIWENKKKEAPK----------------------------PVSIDFHI 341
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
T+VV ITGPNTGGKT ++K LG+A LM+++GL++P+ +P +P+ I DIGD QS
Sbjct: 342 NRNTKVVAITGPNTGGKTVALKGLGIALLMARSGLFIPSIKNPIIPFCPNIFVDIGDDQS 401
Query: 408 LEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
LE NLSTFSGHI RI +ILE ++ + S+VL+DEIGSGTDPSEG ALA ++L+
Sbjct: 402 LEGNLSTFSGHILRIRNILESLNNKKGLSVVLLDEIGSGTDPSEGTALAIALLKEFATLS 461
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
+ + TTHY D+ LK D RFEN + F E+ +P Y + WG G SNAL+I++ IG D
Sbjct: 462 DITLATTHYGDIKALKYSDDRFENVSVAFDEESFKPRYTLNWGIPGRSNALSISRRIGID 521
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
KI+ A L+P+ ++ S + + L +ER K ++ A AA L A L+ E
Sbjct: 522 EKILNEAANY---LKPKEVENINS-IIKGLEDERIKQQNSAEEAAELIARTEILHDE 574
>gi|379727500|ref|YP_005319685.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
gi|376318403|dbj|BAL62190.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
Length = 789
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 287/575 (49%), Gaps = 69/575 (12%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
E+ Q LN+T L + Q + + + DI + G L+ E+ + R L +
Sbjct: 41 EQIQLWLNETKDGLKIQQLCNGIPIPKLVDIHSHMKRLQIGANLNGLELSQIGRILTTTS 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V+ E E + + Y+ + +L+ L+ L +I I + + D AS +L+
Sbjct: 101 EVYHFFDELRENEIEFYNLYTWIDQLV----ILSSLTRQIKVAI-TEDGAVTDEASPELK 155
Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR +N E L+ L++ A+ + +IT R R + +K HK
Sbjct: 156 NIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPVKQEHKNTF-G 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + S+SG T F+EPK VE NN +L +E E IL+ L+AE+A +EI
Sbjct: 210 GVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELAPYYKEILRNA 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + +D A+A F + + + P ++ ++H+ + +HPLL
Sbjct: 270 EIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL------------ 311
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
K +S+ DI + + + +VITGPNTGGKT ++KT+G
Sbjct: 312 ------------------DHDKAVSN-----DITIGEDYQTIVITGPNTGGKTITLKTIG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM ++GL +P ++ ++ F I ADIGD QS+EQNLSTFS H++ IV I+E V +
Sbjct: 349 LLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNIVSIIEKVDKN 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP EG ALA SIL L + + TTHY +L + NA+ E
Sbjct: 409 SLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYNRSGTINASME 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F+++TL PTYR+L G G SNA +I+K +G + KII A++++ E +E+
Sbjct: 469 FNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL-----NEMIA 523
Query: 553 SLMEERRKLESQAR-------TAASLHAEIMDLYR 580
L R+ E++ + A L E+ ++YR
Sbjct: 524 DLENRRKMAETEYKEARYFLNEAEQLQTELKEVYR 558
>gi|390935290|ref|YP_006392795.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570791|gb|AFK87196.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 786
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 208/375 (55%), Gaps = 44/375 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLVHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ LT E+ + EI M + E+D+ FA+A ++ D PIL+++ +
Sbjct: 243 EIERILAELTDEVGEHADEIYENMVALKELDVIFAKAKYSINTDSTKPILNTKGY----- 297
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
INI+ +HPL+ D VPI + +
Sbjct: 298 -INIKNARHPLIA-----------------------------------KDAVVPISVHLG 321
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VITGPNTGGKT ++KT+GL +LMS +GL +PA + + +FD + DIGD QS+
Sbjct: 322 QSFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADDGSDVAFFDNVFVDIGDEQSI 381
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVNSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L K+ ENA+ EF +ETL+PTYR+ G G SNA I+K +G + II
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDII 501
Query: 529 QRAQKLV--ERLRPE 541
+ A+ + E LR E
Sbjct: 502 ENAKNYITSEELRFE 516
>gi|168215509|ref|ZP_02641134.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
gi|182382254|gb|EDT79733.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
Length = 786
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|150015832|ref|YP_001308086.1| recombination and DNA strand exchange inhibitor protein
[Clostridium beijerinckii NCIMB 8052]
gi|229486368|sp|A6LS00.1|MUTS2_CLOB8 RecName: Full=MutS2 protein
gi|149902297|gb|ABR33130.1| MutS2 family protein [Clostridium beijerinckii NCIMB 8052]
Length = 786
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 297/560 (53%), Gaps = 64/560 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E L +T+ AL ++ S+ PL+ + DI + A G LSP ++ V L
Sbjct: 39 NLYEINNKLEETNEALEILISKGNPPLE--GLADIHEGIERAKKGGTLSPGQLLKVGGML 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
+A N+ K+ + E++ + Y L +L + LE++I I + I D+AS
Sbjct: 97 KATRNM-KEFFKREEVE----KSYPKLEDLAYILAPVKALEDEIERAIVSEDEIS-DKAS 150
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
+ L IR R+++ +S +++ + I ++ + L T R R + +K+ +K +
Sbjct: 151 QTLCNIR----RSLKEKNSSVREKISSIVRSNSKYLQDDLYTMRGDRYVLPVKSEYKSQV 206
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ + SS+GAT+F+EP V NN L E AE ILS L+ ++ +
Sbjct: 207 P-GLVHDQSSTGATFFIEPMSLVNLNNEIRELFLKEKAEIERILSDLSLKVKINGDSCLS 265
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++E D FA+ +A ++ + PI V D + +I +HPL
Sbjct: 266 NLKVLVEFDFIFAKGRYASALNAIKPI------VREDGAFSIFSGRHPL----------- 308
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+EN D VP DI + E + ++ITGPNTGGKT ++KT
Sbjct: 309 -----------IEN-------------DKVVPSDIYLGEEFQTLMITGPNTGGKTVTIKT 344
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL +M +GL +PA+++ + +F I ADIGD QS+EQ+LSTFS H++ IV+I++ V
Sbjct: 345 VGLLHIMGLSGLLIPARDNSSIAFFKEIFADIGDEQSIEQSLSTFSSHMTNIVNIMKHVD 404
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SL L DE+G+GTDP+EG ALA SIL+ LR+R + TTHY++L K ENA+
Sbjct: 405 DKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSELKAYALKTDGVENAS 464
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE---RQQH 545
EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E L+ E R+
Sbjct: 465 VEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEENLQFENLIRELQ 524
Query: 546 RKSELYQSLMEERRKLESQA 565
KS + + E + L QA
Sbjct: 525 EKSIIAKKEAREAKMLRDQA 544
>gi|418925376|ref|ZP_13479278.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|377744445|gb|EHT68422.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
Length = 782
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSSNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|422697088|ref|ZP_16755036.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
gi|315174484|gb|EFU18501.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
Length = 788
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 290/576 (50%), Gaps = 77/576 (13%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E +E + D + L + L EL ++ ID + D AS L+ IR
Sbjct: 104 RFFDELSENEVD----FERLYIWREQLEVLPELNRQLKQGIDDDGYVT-DEASPALKAIR 158
Query: 140 AERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+R+ E LDS+++ A+ + L+T R R + +K +K + G+
Sbjct: 159 QNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GGVV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKYLM 252
+ S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 213 HDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITHNA 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 270 YVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL------------ 311
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
+P K+ V DI + E + +VITGPNTGGKT ++KTLG
Sbjct: 312 ---DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKTLG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V +
Sbjct: 349 LLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQ 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+ E
Sbjct: 409 SLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINASME 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+ +
Sbjct: 469 FDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEMIE 523
Query: 553 SLMEERRKLES----QAR----TAASLHAEIMDLYR 580
L E RRK+ +AR +A+LH E+ + Y+
Sbjct: 524 DL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQ 558
>gi|110799497|ref|YP_696563.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens ATCC 13124]
gi|123344633|sp|Q0TP77.1|MUTS2_CLOP1 RecName: Full=MutS2 protein
gi|110674144|gb|ABG83131.1| MutS2 family protein [Clostridium perfringens ATCC 13124]
Length = 786
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|452856510|ref|YP_007498193.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452080770|emb|CCP22535.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 785
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 266/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|421150022|ref|ZP_15609678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|394329412|gb|EJE55514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
Length = 782
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|334340999|ref|YP_004545979.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
gi|334092353|gb|AEG60693.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
Length = 783
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 253/479 (52%), Gaps = 57/479 (11%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
LS E+ A TL A + K TE + RY L EL + +LE+ I
Sbjct: 83 LSAEELLATGETLAAARRIKKFFTEKKD-------RYPLLSELAEAMIHQPQLEKDILRA 135
Query: 120 IDCKLLIILDRASEDLELIRA-ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I I D + E L++ R +R +N E ++S+++ Q + + P+IT R
Sbjct: 136 ILPGGEIADDASPELLQIRRGLQRSQNRIRERMESIIRSSENQKY----LQDPIITIRND 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R V +K ++ +P GI + S+SGAT F+EP VE NN RL +E E IL+
Sbjct: 192 RYVVPVKQEYRNQIP-GIVHDQSASGATLFVEPMPVVEANNEVRRLVAAEKQEIQKILAE 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L+ +++ E+ +D + ++D A+A +++ ++ P + ++I +
Sbjct: 251 LSQGVSEISEELTITLDALGQLDFVMAKARYSRQLNAWGP------KIVEGGVMDIRKGR 304
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL + VP I + + R +VI
Sbjct: 305 HPLLPADA------------------------------------VPATISLGKDFRSLVI 328
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GL +LM+++GL++PA++ + F I ADIGD QS+EQ+LSTFS
Sbjct: 329 TGPNTGGKTVTLKTVGLFTLMTQSGLHIPAESGTEMGVFSKIYADIGDEQSIEQSLSTFS 388
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ +VDIL + SLVL+DE+G+GTDP+EG ALA +IL+ L R + TTHY++L
Sbjct: 389 SHMTNLVDILAGAGQGSLVLLDELGAGTDPTEGAALARAILETLFQRGVCTIATTHYSEL 448
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ENA+ EF +ETLRPTYR+L G G SNA I+ +G +++QRA++ +
Sbjct: 449 KNYAYTTPGVENASVEFDIETLRPTYRLLIGRPGRSNAFEISARLGLSPEVVQRARQFL 507
>gi|384165327|ref|YP_005546706.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens LL3]
gi|328912882|gb|AEB64478.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
LL3]
Length = 785
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 263/518 (50%), Gaps = 58/518 (11%)
Query: 21 QKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
QK L++ A A+M+ + + DI L A G +L+P+E + L AV +
Sbjct: 44 QKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
+++ E DG S+ PL++ + L +LE +I CID + LD AS L I
Sbjct: 104 HFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPALRGI 157
Query: 139 RAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + + R + L+S+L+ +A + ++T R R + +K ++ GI
Sbjct: 158 RTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY-GGI 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI ++
Sbjct: 213 VHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQNVEV 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 273 LQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL-------------- 312
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
P V N DI++ + +VITGPNTGGKT ++KTLGL
Sbjct: 313 --PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKTLGLL 351
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV IL+ VS SL
Sbjct: 352 TIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVSENSL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL DE+G+GTDP EG ALA SIL + + TTHY +L NA+ EF
Sbjct: 412 VLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 472 IETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|332686481|ref|YP_004456255.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
gi|332370490|dbj|BAK21446.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
Length = 789
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 287/575 (49%), Gaps = 69/575 (12%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
E+ Q LN+T L + Q + + + DI + G L+ E+ + R L +
Sbjct: 41 EQIQLWLNETKDGLKIQQLCNGIPIPKLVDIHSHMKRLQIGANLNGLELSQIGRILTTTS 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V+ E E + + Y+ + +L+ L+ L +I I + + D AS +L+
Sbjct: 101 EVYHFFDELRENEIEFYNLYTWIDQLV----ILSSLTRQIKVAI-TEDGAVTDEASPELK 155
Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR +N E L+ L++ A+ + +IT R R + +K HK
Sbjct: 156 NIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPVKQEHKNTF-G 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + S+SG T F+EPK VE NN +L +E E IL+ L+AE+A +EI
Sbjct: 210 GVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELAPYYKEILRNA 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + +D A+A F + + + P ++ ++H+ + +HPLL
Sbjct: 270 EIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL------------ 311
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
K +S+ DI + + + +VITGPNTGGKT ++KT+G
Sbjct: 312 ------------------DHDKAVSN-----DITIGEDYQTIVITGPNTGGKTITLKTIG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM ++GL +P ++ ++ F I ADIGD QS+EQNLSTFS H++ IV I+E V +
Sbjct: 349 LLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNIVSIIEKVDKN 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP EG ALA SIL L + + TTHY +L + NA+ E
Sbjct: 409 SLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYNRSGTINASME 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F+++TL PTYR+L G G SNA +I+K +G + KII A++++ E +E+
Sbjct: 469 FNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL-----NEMIA 523
Query: 553 SLMEERRKLESQAR-------TAASLHAEIMDLYR 580
L R+ E++ + A L E+ ++YR
Sbjct: 524 DLENRRKMAETEYKEARYFLNEAEQLQTELKEVYR 558
>gi|168214914|ref|ZP_02640539.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
gi|170713649|gb|EDT25831.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
Length = 786
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|429506149|ref|YP_007187333.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|429487739|gb|AFZ91663.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
Length = 785
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 266/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|291527503|emb|CBK93089.1| MutS2 family protein [Eubacterium rectale M104/1]
Length = 792
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 264/538 (49%), Gaps = 66/538 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELL 103
DI G LN+ +LL + V + ++A + L G ++ S L + +
Sbjct: 79 DIGGALNTT---ELLRICSLLEVAKRVKAYGRSAMDNEKQDSLSGLFAGIEPVSALCDEI 135
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
K C L+E E I D AS +L IR + + + + L K+
Sbjct: 136 KRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTR 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ ++T R R C+ +KA K +P G+ + SS+G+T F+EP V NN L
Sbjct: 182 TYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELF 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
E E IL+ L+ ++A + ++ + + E+D FA+A A+ +GV P ++ H
Sbjct: 241 IKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH 300
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
INI +HPLL + VPI
Sbjct: 301 ------INIRKGRHPLLDAKKV-----------------------------------VPI 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
D+++ E + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIG
Sbjct: 320 DVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQ+LSTFS H++ IV ILE SL L DE+ SGTDP+EG ALA SIL L
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQY 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+ + TTHY++L ENA EF++ETL PTYR+L G G SNA I+ +G
Sbjct: 440 GAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGL 499
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
D II+ A+ R +L SL +R+ +E + S AEI L ++
Sbjct: 500 DENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQ 552
>gi|154686993|ref|YP_001422154.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens FZB42]
gi|189030421|sp|A7Z7E7.1|MUTS2_BACA2 RecName: Full=MutS2 protein
gi|154352844|gb|ABS74923.1| MutSB [Bacillus amyloliquefaciens FZB42]
Length = 785
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 266/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 DVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|242373376|ref|ZP_04818950.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
gi|242348739|gb|EES40341.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
Length = 782
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 264/500 (52%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLIHRANIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + L++L ++I C + D AS L+ IR++ +R +NLD ++K
Sbjct: 123 EKMNQLPVLSDLFQEIKD--KCDTYDLFDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++A +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVA-AEADALLIAESVMGQIDFLTAKARYARSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + V ++ HPLL N E V + +
Sbjct: 295 PTFKKERTVYLPNAF------HPLL-----------------------NKETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I D ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 IDD----------VET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R+ L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|222151569|ref|YP_002560725.1| recombination and DNA strand exchange inhibitor protein
[Macrococcus caseolyticus JCSC5402]
gi|222120694|dbj|BAH18029.1| recombination and DNA strand exchange inhibitor protein homolog
[Macrococcus caseolyticus JCSC5402]
Length = 783
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 259/509 (50%), Gaps = 54/509 (10%)
Query: 31 LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN---NVWKKLTEAAE 87
+ M Q++P +S + DI ++ AV G +LS E+ ++ ++ VN L E E
Sbjct: 61 IEMTQTEP-GMSMLSDIQSLVRRAVIGSVLSVVELNKIKNNIKVVNRYKTYIANLYEERE 119
Query: 88 LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME 147
L+ + Y +L + +TEL E I C + D AS L IR E R
Sbjct: 120 LEIPVM--YHKFQQLPQ----VTELAESIQS--KCDETTLFDHASPKLSEIRQEMNRINR 171
Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
+ L+ + + ++T R R + +++ +K P GI + SSSG T+++
Sbjct: 172 RIKERLESIVRSSNNQKKLSDAIVTIRNGRQVIPVRSEYKQDFP-GIVHDTSSSGQTFYI 230
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
EP V+ + +++ E E IL LT E+A+ + + Y D + ++D+ A+A +
Sbjct: 231 EPNSIVQLSTELSAVTHREQEEVERILYELTNEVAEYDNALTYSTDVLSDLDVLMAKAKY 290
Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
V P +V ++++ G HPLL P + V+N+
Sbjct: 291 GNRNKMVMP------NVVNARTVDLPGAWHPLL----------------PADTVVKNNIS 328
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
+G +T+ V+ITGPNTGGKT ++KT GL LM+++G+ +PA
Sbjct: 329 FIG-------------------DTQTVIITGPNTGGKTVTLKTTGLIILMTQSGMMIPAA 369
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
+ FD + DIGD QS+EQ+LSTFS H++ IV IL+ ++ S V+ DE+G+GTDPS
Sbjct: 370 EGATISVFDEVFCDIGDEQSIEQSLSTFSSHMTNIVSILKEMTSNSFVMFDELGAGTDPS 429
Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
EG ALA SIL ++ + + TTHY +L NA+ EF +ETL PTYR+L G
Sbjct: 430 EGAALAMSILDRCLEQNVMTMATTHYPELKAYSYNRKHVMNASVEFDIETLSPTYRLLMG 489
Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G SNA +IAK +G II+ A+++++
Sbjct: 490 VPGKSNAFDIAKKLGLSPSIIKHARQMIQ 518
>gi|417796292|ref|ZP_12443507.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443640481|ref|ZP_21124470.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
gi|334269791|gb|EGL88204.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443405162|gb|ELS63772.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
Length = 782
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|168206066|ref|ZP_02632071.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
gi|170662410|gb|EDT15093.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
Length = 786
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|384160390|ref|YP_005542463.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|384169470|ref|YP_005550848.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
gi|328554478|gb|AEB24970.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|341828749|gb|AEK90000.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
Length = 785
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 263/518 (50%), Gaps = 58/518 (11%)
Query: 21 QKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
QK L++ A A+M+ + + DI L A G +L+P+E + L AV +
Sbjct: 44 QKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
+++ E DG S+ PL++ + L +LE +I CID + LD AS L I
Sbjct: 104 HFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPALRGI 157
Query: 139 RAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + + R + L+S+L+ +A + ++T R R + +K ++ GI
Sbjct: 158 RTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY-GGI 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI ++
Sbjct: 213 VHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQNVEV 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 273 LQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL-------------- 312
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
P V N DI++ + +VITGPNTGGKT ++KTLGL
Sbjct: 313 --PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKTLGLL 351
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV IL+ VS SL
Sbjct: 352 TIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVSENSL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL DE+G+GTDP EG ALA SIL + + TTHY +L NA+ EF
Sbjct: 412 VLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 472 IETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|169343643|ref|ZP_02864642.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
gi|169298203|gb|EDS80293.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
Length = 786
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|339007645|ref|ZP_08640219.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
gi|338774848|gb|EGP34377.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
Length = 785
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 267/534 (50%), Gaps = 64/534 (11%)
Query: 12 PFGK--SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF ++ +Q+ + S L + S PL I +I G + A +L+P E+ +
Sbjct: 36 PFNHIDAVRHAQRQTEEASTVLRVKGSVPL--GGIRNIRGPIQRARLNSILAPLELLDIA 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + + +T+ +E S L L+ L +LE +I CID ++ D
Sbjct: 94 TTLHAGRRLKQFITDISEE-----HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-D 147
Query: 130 RASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS +L IR E + R E LD + + + Q I +T R R + +K
Sbjct: 148 SASLELRQIRQEIRSSEARIREKLDQMTRSSSTQKMLMENI----VTIRGDRFVIPVKQE 203
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + S+SGAT F+EP+ V NN E RL E IL LT +A
Sbjct: 204 YRSHF-GGIVHDQSASGATLFIEPEVIVSMNNKLREARLKEEHEVER--ILYTLTVLVAD 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ + + E+D FA+A A M + P L+ + ++ +HPL+
Sbjct: 261 HVEMLLENLSVLAELDFIFAKAQLAYSMKAISPKLNEEGYILLKKG------RHPLI--- 311
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P VP+D+++ +V+TGPNTGG
Sbjct: 312 ------------DP--------------------KVVVPLDVELGKGYTGIVVTGPNTGG 339
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 340 KTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNII 399
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ + +SLVL DE+G+GTDP+EG ALA SIL ++ + V TTHY++L
Sbjct: 400 RILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHVLAKGARLVATTHYSELKAYAYDT 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
NA+ EF ++TLRPTYR+L G G SNA IA +G + +II +A++ V +
Sbjct: 460 PEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIASRLGLNEQIIDKARRSVSK 513
>gi|421871064|ref|ZP_16302686.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
gi|372459691|emb|CCF12235.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
Length = 785
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 267/534 (50%), Gaps = 64/534 (11%)
Query: 12 PFGK--SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF ++ +Q+ + S L + S PL I +I G + A +L+P E+ +
Sbjct: 36 PFNHIDAVRHAQRQTEEASTVLRVKGSVPL--GGIRNIRGPIQRARLNSILAPLELLDIA 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + + +T+ +E S L L+ L +LE +I CID ++ D
Sbjct: 94 TTLHAGRRLKQFITDISEE-----HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-D 147
Query: 130 RASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS +L IR E + R E LD + + + Q I +T R R + +K
Sbjct: 148 SASLELRQIRQEIRSSEARIREKLDQMTRSSSTQKMLMENI----VTIRGDRFVIPVKQE 203
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + S+SGAT F+EP+ V NN E RL E IL LT +A
Sbjct: 204 YRSHF-GGIVHDQSASGATLFIEPEVIVSMNNKLREARLKEEHEVER--ILYTLTVLVAD 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ + + E+D FA+A A M + P L+ + ++ +HPL+
Sbjct: 261 HVEMLLENLSVLAELDFIFAKAQLAYSMKAISPKLNEEGYILLKKG------RHPLI--- 311
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P VP+D+++ +V+TGPNTGG
Sbjct: 312 ------------DP--------------------KVVVPLDVELGKGYTGIVVTGPNTGG 339
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 340 KTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNII 399
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ + +SLVL DE+G+GTDP+EG ALA SIL ++ + V TTHY++L
Sbjct: 400 RILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHVLAKGARLVATTHYSELKAYAYDT 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
NA+ EF ++TLRPTYR+L G G SNA IA +G + +II +A++ V +
Sbjct: 460 PEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIASRLGLNEQIIDKARRSVSK 513
>gi|325288446|ref|YP_004264627.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
glycolicus DSM 8271]
gi|324963847|gb|ADY54626.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
glycolicus DSM 8271]
Length = 793
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 277/553 (50%), Gaps = 63/553 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E + L +T A +++ PL + ++I + G +L P E+ ++ T+R
Sbjct: 42 IREVRNRLRETDEAKILLRFNPLFSVRGAKEIRPSVERCARGGILQPEELLEIKDTVRVA 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
V LTE + + +S L ++ LE++I CI D K I D+ASE
Sbjct: 102 RQVKNILTEDGTAKSNVAELFS-LRGIVSEVAPQKPLEDEISRCINEDGK---IDDKASE 157
Query: 134 DLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
DL IR +R + LD +++ A Q + +IT R R V +K +
Sbjct: 158 DLAKIRRMITGIHQRLKDVLDGIMRNPATQKM----LQDRVITTRGDRYVVPVKQEYGSA 213
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+GI + S+SGAT F+EP V+ N E E IL LTA +A EI
Sbjct: 214 F-NGIVHDQSASGATLFIEPAAVVQLGNELREAVLRENREVQRILQQLTAIVAVKVDEIA 272
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D A+A + M+ P++ ++ + + + +HPLL G
Sbjct: 273 ASFEALARLDFVLAKALLSDKMNAGSPLVLNKPQIKLNKA------RHPLLSGKV----- 321
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP+ I++ + ++VITGPNTGGKT ++K
Sbjct: 322 -------------------------------VPLSIELGEDFNILVITGPNTGGKTVTLK 350
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL S+M ++GL++PA++ +L F I DIGD QS+EQ+LSTFSGH+ IV I++
Sbjct: 351 TVGLMSVMMQSGLHIPAESDSKLGVFRKIFIDIGDEQSVEQSLSTFSGHLKNIVGIVKEA 410
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL DEIG+GTDP+EG ALA +I+ L DR + TTHY L ENA
Sbjct: 411 DDKSLVLFDEIGAGTDPAEGAALAMAIISELLDRGCRGIATTHYGTLKTFAYNTAGLENA 470
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETL PTYR++ G G SNA +IA+ +G + I+ A+ + ERQ + S+
Sbjct: 471 SVEFDPETLSPTYRLMIGIPGRSNAFSIAERLGLQKNILDLAKTYI----SERQM-KVSD 525
Query: 550 LYQSLMEERRKLE 562
L ++L E +R++E
Sbjct: 526 LLENLEETQREIE 538
>gi|384266410|ref|YP_005422117.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899448|ref|YP_006329744.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
gi|380499763|emb|CCG50801.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173558|gb|AFJ63019.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
Length = 785
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 266/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|374992901|ref|YP_004968400.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
gi|357211267|gb|AET65885.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
Length = 787
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 269/546 (49%), Gaps = 69/546 (12%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T A +M+ PL + ++I L + G ++ E+ +R TLR + L
Sbjct: 49 LQKTEEAKNLMRGNPLFSVRGAKEIRAYLERCLRGGVVHGEELLEIRDTLRVGRKTKQYL 108
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRA 140
E E YS L +++ LE++I CI D + D AS +L +R
Sbjct: 109 QEFRE-------SYSGLWDIVLPIESQKSLEDEISRCISEDGN---VADNASPELAELRR 158
Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E+L+ L+ Q + P+IT+R R + IK ++ P GI
Sbjct: 159 SINRLQNRIRESLEGTLRNPVYQKM----LQDPIITQRSDRYVIPIKQEYRGSFP-GIVH 213
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP V+ N + E E IL +L+A+I EI L + +
Sbjct: 214 DQSASGATLFIEPMPVVQLGNELREVILKEHREVQRILQMLSAQIEGRADEIADLHEALA 273
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++DL A+A + M+ P L + + + +HPL
Sbjct: 274 QLDLVIAKAHLSLDMNAGSPELVTGQQLKLVQA------RHPL----------------- 310
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
IS VP+ +++ + +VITGPNTGGKT ++K +GL +
Sbjct: 311 -------------------ISGRVVPLSVELGIDFDTLVITGPNTGGKTVALKAVGLMAA 351
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++ GL +PA++ ++ F + ADIGD QS+EQ+LSTFSGH+ IVDI+ SLVL
Sbjct: 352 MNQCGLQIPAESESKMGVFTQLFADIGDEQSVEQSLSTFSGHMKNIVDIINRADERSLVL 411
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA IL L +R + TTHY L + R +NA+ EF E
Sbjct: 412 LDEVGAGTDPTEGAALAMGILAELHERGCRTISTTHYGALKTFAYETPRVKNASVEFDTE 471
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA IA +G ++ +A V ER+ ++L ++L E
Sbjct: 472 TLRPTYRLLIGIPGKSNAFTIAGRLGLSEGVLAKANTFV----TEREMQ-VADLIENLGE 526
Query: 557 ERRKLE 562
RR++E
Sbjct: 527 TRREIE 532
>gi|298243242|ref|ZP_06967049.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
gi|297556296|gb|EFH90160.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
Length = 816
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 282/568 (49%), Gaps = 99/568 (17%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L+E+++ L T+ A+ ++ P + + DI +L + +L+PS++ V T+R+
Sbjct: 40 LDEARRRLAYTTEAIRLIDLYPDVGVRGAHDIRPLLVRSSREGILAPSDLVEVLETVRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQ-RYSPLLELL-----KNCNFLTELEEKIGFCIDCKLLIILD 129
V + L D L+ + PLL +L + + +EE + + +LD
Sbjct: 100 LYVARLL--------DKLEPEHYPLLHMLGSDIPQRPQIVRRIEETVSEEGE-----VLD 146
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
AS L +R + + + L L+ + + + +P+IT R R + ++A +
Sbjct: 147 TASPTLRKLRFDIRGASQRLQDRLRSLVGEY--GKHLQEPIITMRNDRYVIPVRAESRGQ 204
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ GI + SSSGAT F+EP VE NN L E E IL +L+AEI +
Sbjct: 205 V-RGIVHDQSSSGATVFVEPMVVVELNNRIRELQVEERREIERILRVLSAEIGHEAESLT 263
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + E D A++ +A+ PIL+++ I++ +HPLL G
Sbjct: 264 VAVELLAEFDTYLAKSRYARMTSASEPILNAEGR------IDLHNARHPLLTGKV----- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP + + E +VVITGPNTGGKT ++K
Sbjct: 313 -------------------------------VPTNFYLGREFHMVVITGPNTGGKTVALK 341
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE-- 427
T+GL +LM+++G+++PA H + F+ +LADIGD QS+EQ+LSTFS H+SRI+DIL
Sbjct: 342 TVGLLTLMAQSGMHIPADVHSEIAVFEDVLADIGDEQSIEQSLSTFSSHMSRIIDILRRV 401
Query: 428 ------------------LVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
LV R++ LVL DE+G+GTDPSEG ALA +IL YL +R
Sbjct: 402 EAVQQQDVPDIHGRLAETLVKRQNHHVLVLFDELGAGTDPSEGSALARAILSYLLERKVS 461
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
V TTHY +L + NA+ EF++ETL PTY++ G G SNAL IA +G D
Sbjct: 462 TVATTHYTELKAFAYEQPGVVNASVEFNVETLSPTYKLSIGLPGRSNALAIATRLGLDEP 521
Query: 527 IIQ-----------RAQKLVERLRPERQ 543
II+ R + L+E L+ ERQ
Sbjct: 522 IIESSRQFLGSSGVRMENLLEGLQSERQ 549
>gi|284048620|ref|YP_003398959.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
gi|283952841|gb|ADB47644.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
Length = 790
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 281/555 (50%), Gaps = 67/555 (12%)
Query: 26 QTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T+ A+ ++ + + L L + DI+ ++ G +L P + A+ T+ + ++ + L E
Sbjct: 49 ETAEAVQLLDEGKRLPLGGMTDISPLVKRTRVGSILEPEDFKAIGDTIDGLRHLKQFLLE 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----A 140
E + +L+ Y P L + L +++ +D K I D AS L+ +R A
Sbjct: 109 DTE-NAPALRDYGPQL------GDFSRLSKQLSSALDEKG-NIKDNASVKLQGLRTGILA 160
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
+ R + L+SLL Q + L+T R R + IK ++ P G+ + S+
Sbjct: 161 AKNRVKDKLNSLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP-GVVHDQSA 215
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SGAT F+EP V NN + E AE IL LT + I +D ++DL
Sbjct: 216 SGATLFVEPMAVVNLNNDIKKYRLEEQAEVERILRTLTGHVGSEAENILSSLDIAAQVDL 275
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A AQ + P++ Q + +HPLL
Sbjct: 276 IGAKAALAQKLHCCRPMMILQQRLRITQG------RHPLL-------------------- 309
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
D E VP+DI + + ++ITGPNTGGKT ++KT+G+ +LM++A
Sbjct: 310 DQEKV---------------VPLDINLGDDFTTLLITGPNTGGKTVALKTVGVFALMAQA 354
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++PA+ LP F + ADIGD QS+EQ+LSTFSGH+ ++ IL+ V LVL+DE+
Sbjct: 355 GMFVPAR-EAILPVFGGVYADIGDEQSIEQSLSTFSGHMKNMISILDEVREGDLVLVDEV 413
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
GTDP+EG ALA ++++YL + L ++TTHY++L + ENA+ EF ETLRP
Sbjct: 414 CVGTDPTEGAALAMAMIEYLYKKKVLTIMTTHYSELKTFAYEHEGMENASVEFDPETLRP 473
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERR 559
TY++L G G SNA I+K +G + I+ A+ + + H E + Q+L ERR
Sbjct: 474 TYKLLMGVPGSSNAFYISKRLGLPQGILDEARTFIG------EGHSNMERVLQNLEGERR 527
Query: 560 KLESQARTAASLHAE 574
+ ES+ ++L E
Sbjct: 528 EYESRKDEISALQRE 542
>gi|314933341|ref|ZP_07840706.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
gi|313653491|gb|EFS17248.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
Length = 782
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 258/499 (51%), Gaps = 54/499 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ SE+ ++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLIHRANIGGVLNVSELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS L+ IR++ +R +NLD ++K
Sbjct: 123 EKMNQLPVLTDLFQEIKD--KCDTYDLFDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPTSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT ++A I + +ID A+A +A+ + G P
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVAVDADSILIAESVMGQIDFLIAKARYARSIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL + E V + + I
Sbjct: 296 TFKKERTVYLPNAF------HPLL-----------------------DKETVVANTIEFI 326
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 327 DD------------VETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSIFE 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+R+ L + TTHY +L NA+ EF+++TL PTY++L G G SNA +
Sbjct: 435 LDYVRNLGSLVMATTHYPELKAYSYNCEGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFD 494
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I+K +G II +A+ ++
Sbjct: 495 ISKKLGLSLNIINKAKTMI 513
>gi|56421228|ref|YP_148546.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus kaustophilus HTA426]
gi|81675734|sp|Q5KWF8.1|MUTS2_GEOKA RecName: Full=MutS2 protein
gi|56381070|dbj|BAD76978.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length = 784
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 270/526 (51%), Gaps = 60/526 (11%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L++T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 40 LEEVAAWLDETDEAAAVLRLAGYVPLD--GVVDIRPHLKRAAIGGTLSPQELLEVAAT-S 96
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
A + K+L + L+R + L ELE + ID + LD AS+
Sbjct: 97 AASRQMKRLIAGLYDEHGGLERLFRYADTLAEA---PELEHDVRRSIDDHGEV-LDAASD 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L +R + + R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 153 RLRSLRGQIRSVEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRGA 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+ +
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEPLA 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 268 RTVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D E + VP DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -----------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 347 TIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L NA
Sbjct: 407 DGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 512
>gi|417901588|ref|ZP_12545464.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
gi|341845427|gb|EGS86629.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
Length = 782
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSVKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|384459066|ref|YP_005671486.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
gi|325509755|gb|ADZ21391.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
Length = 806
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 274/527 (51%), Gaps = 60/527 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
P+G SL E ++ + +T A ++ + P + + D+ ++ A G L+P ++ V
Sbjct: 54 PYG-SLYEVKEHIEETKEAFELLMKKGAPPFEGAY--DVTEAVSMAEKGFSLAPGQLLKV 110
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
LR + ++ E + Y + ++ L +E+ I F I
Sbjct: 111 GSMLRCARKFKEYISHKEEEES-----YRIIEDICSGIIPLKNIEDNI-FNAIIGEEEIS 164
Query: 129 DRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKASH 186
D+AS L IR R++++ ++ +K KV A + + + + L T R R + +KA +
Sbjct: 165 DKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKAEY 220
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P G+ + SS+GAT F+EP G V NN L E AE IL L+A I KS
Sbjct: 221 KAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKSIV 279
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+K V E+D FA+A +A ++ P HV+ I+I +HPL+
Sbjct: 280 AVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI------ 327
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VP++I + E +VITGPNTGGKT
Sbjct: 328 ---------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGKTV 358
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL +M+ +GL +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 359 TLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRII 418
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 419 DDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENV 478
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+K
Sbjct: 479 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARK 525
>gi|418620520|ref|ZP_13183324.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
gi|374822650|gb|EHR86670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
Length = 783
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 278/547 (50%), Gaps = 55/547 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K + + + +Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVIKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT +A ++ + +ID A+A +A+ + G P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL N + V + + I
Sbjct: 297 TFYKERTVYLPNAY------HPLL-----------------------NKDTVVANTIEFI 327
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++RD L + TTHY +L NA+ EF + TL PTY++L G G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHAE 574
I+K +G II +A+ ++ E +S + + + E+R +LE R A + H +
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDD 555
Query: 575 IMDLYRE 581
+ Y++
Sbjct: 556 LERQYQQ 562
>gi|418329211|ref|ZP_12940290.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418631982|ref|ZP_13194426.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|420192813|ref|ZP_14698670.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
gi|365230873|gb|EHM71948.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374833651|gb|EHR97326.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|394260629|gb|EJE05438.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
Length = 782
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR+E +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSEISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|418598399|ref|ZP_13161909.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
gi|374399756|gb|EHQ70892.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
Length = 782
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRIETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|57651753|ref|YP_186017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus COL]
gi|87161406|ref|YP_493741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194845|ref|YP_499643.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221268|ref|YP_001332090.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509318|ref|YP_001574977.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140458|ref|ZP_03564951.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451841|ref|ZP_05699862.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|262048725|ref|ZP_06021607.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|282919921|ref|ZP_06327650.1| MutS2 protein [Staphylococcus aureus A9765]
gi|284024069|ref|ZP_06378467.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 132]
gi|294848134|ref|ZP_06788881.1| MutS2 protein [Staphylococcus aureus A9754]
gi|304381299|ref|ZP_07363952.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014337|ref|YP_005290573.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|384861738|ref|YP_005744458.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|384869677|ref|YP_005752391.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781372|ref|YP_005757543.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|387142755|ref|YP_005731148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|415688463|ref|ZP_11452153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|417648497|ref|ZP_12298321.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|418282999|ref|ZP_12895756.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|418286447|ref|ZP_12899093.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|418318056|ref|ZP_12929471.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|418321588|ref|ZP_12932927.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|418570974|ref|ZP_13135228.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|418574595|ref|ZP_13138762.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|418578974|ref|ZP_13143069.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|418647620|ref|ZP_13209683.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|418657820|ref|ZP_13219574.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|418875077|ref|ZP_13429339.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|418903353|ref|ZP_13457394.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|418911750|ref|ZP_13465733.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|419775285|ref|ZP_14301227.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|422743467|ref|ZP_16797451.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422745626|ref|ZP_16799565.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424784971|ref|ZP_18211774.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|440708153|ref|ZP_20888828.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734591|ref|ZP_20914203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448744704|ref|ZP_21726588.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
gi|81694717|sp|Q5HGU0.1|MUTS2_STAAC RecName: Full=MutS2 protein
gi|122539777|sp|Q2FZD3.1|MUTS2_STAA8 RecName: Full=MutS2 protein
gi|123486337|sp|Q2FHT7.1|MUTS2_STAA3 RecName: Full=MutS2 protein
gi|229486380|sp|A6QG46.1|MUTS2_STAAE RecName: Full=MutS2 protein
gi|229486381|sp|A8Z1S5.1|MUTS2_STAAT RecName: Full=MutS2 protein
gi|57285939|gb|AAW38033.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus COL]
gi|87127380|gb|ABD21894.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202403|gb|ABD30213.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|150374068|dbj|BAF67328.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160368127|gb|ABX29098.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860449|gb|EEV83276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|259163181|gb|EEW47741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|269940638|emb|CBI49017.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|282594637|gb|EFB99621.1| MutS2 protein [Staphylococcus aureus A9765]
gi|294824934|gb|EFG41356.1| MutS2 protein [Staphylococcus aureus A9754]
gi|302750967|gb|ADL65144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304340282|gb|EFM06223.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315196867|gb|EFU27210.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141041|gb|EFW32888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320143098|gb|EFW34888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|329313812|gb|AEB88225.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|329730765|gb|EGG67144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|364522361|gb|AEW65111.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|365167155|gb|EHM58631.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|365168596|gb|EHM59934.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|365224203|gb|EHM65468.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|365244748|gb|EHM85405.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|371978726|gb|EHO95967.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|371981854|gb|EHO99015.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|374363034|gb|AEZ37139.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|375029330|gb|EHS22658.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|375039929|gb|EHS32841.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|377697001|gb|EHT21356.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|377725128|gb|EHT49243.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|377742368|gb|EHT66353.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|377771122|gb|EHT94880.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|383970969|gb|EID87059.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|421956381|gb|EKU08710.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|436431619|gb|ELP28972.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505251|gb|ELP41179.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|445562010|gb|ELY18195.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
Length = 782
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|418928400|ref|ZP_13482286.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|377738312|gb|EHT62321.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
Length = 782
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAKYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|418559141|ref|ZP_13123687.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
gi|371975432|gb|EHO92726.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
Length = 782
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|422346549|ref|ZP_16427463.1| MutS2 protein [Clostridium perfringens WAL-14572]
gi|373226094|gb|EHP48421.1| MutS2 protein [Clostridium perfringens WAL-14572]
Length = 786
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S +L DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFILFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|345017977|ref|YP_004820330.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033320|gb|AEM79046.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 791
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 295/572 (51%), Gaps = 60/572 (10%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKASNIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + +LE++I I +
Sbjct: 93 LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKDLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKSLRRQKSSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKERQEIQRILLELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V ++D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF +ETL+PTY+++ G G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
++ + +RR+LE + A L ++
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDV 547
>gi|418644704|ref|ZP_13206844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
gi|375025107|gb|EHS18517.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
Length = 781
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|418949118|ref|ZP_13501378.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
gi|375369683|gb|EHS73552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
Length = 782
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|410727381|ref|ZP_11365601.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
gi|410598971|gb|EKQ53532.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
Length = 786
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 196/585 (33%), Positives = 298/585 (50%), Gaps = 66/585 (11%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQL 59
G A+V K + P+ E + KL +T AL ++ + P L + DI + A G
Sbjct: 27 GKAMVDKLE-PYDNMYEINNKL-EETDEALEILITKGNP-PLEGLADIHEGIERAKKGGT 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
LSP ++ V LRA + + E AE + Y L +L + LE +I
Sbjct: 84 LSPEQLLKVGGMLRAARTMKEFFKREEAE------KAYPRLEDLAYILVPIKALEAEIER 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRS 176
I + I D+AS+ L IR R+++ +S +++ I ++ + L T R
Sbjct: 138 AIVSEDEIS-DKASQTLYNIR----RSLKEKNSSVREKIGSIVRSNSKYLQDDLYTMRGD 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +K+ +K +P G+ + SS+GAT+F+EP V NN L E AE ILS
Sbjct: 193 RYVIPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSE 251
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L+ ++ + E + ++E D FA+ +A ++ V PI V D +I +
Sbjct: 252 LSLKVKNNSDECLSNLKVLVEFDFIFAKGRYASSLNAVKPI------VRDDGVFSILSGR 305
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPL+ P D VP D+ + E + ++I
Sbjct: 306 HPLI---------------EP--------------------DKVVPSDVYLGEEFQTLMI 330
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GL +M +GL +PAK++ + F I ADIGD QS+EQ+LSTFS
Sbjct: 331 TGPNTGGKTVTIKTVGLLHIMGLSGLLIPAKDNSSIALFTEIFADIGDEQSIEQSLSTFS 390
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ IV+I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR+R + TTHY++L
Sbjct: 391 SHMTNIVNIMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSEL 450
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
K ENA+ EF +ETL+PTYR+L G G SNA I+K +G +I+RA+ E
Sbjct: 451 KAYALKTEGVENASVEFDIETLKPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAK---E 507
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ E Q L + L E+ + +AR A L + +L R+
Sbjct: 508 YMSEENLQF--ENLIRDLQEKSIIAKKEAREAKMLRDQAEELKRK 550
>gi|223043809|ref|ZP_03613852.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|417907533|ref|ZP_12551304.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
gi|222442906|gb|EEE49008.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|341595562|gb|EGS38205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
Length = 782
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 257/499 (51%), Gaps = 54/499 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLIHRANIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS L+ IR++ +R +NLD ++K
Sbjct: 123 EKMSQLPVLTDLFQEIKD--KCDTYDLYDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT ++A I + +ID A+A +A+ + G P
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVAVEADSILIAESVMGQIDFLIAKARYARSIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL SN+ DVE
Sbjct: 296 TFKKERTVYLPNAF------HPLL------DKETVVSNTIEFIDDVE------------- 330
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFE 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+R+ L + TTHY +L NA+ EF+++TL PTY++L G G SNA +
Sbjct: 435 LDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFD 494
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I+K +G II +A+ ++
Sbjct: 495 ISKKLGLGLNIINKAKTMI 513
>gi|314936676|ref|ZP_07844023.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
gi|313655295|gb|EFS19040.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
Length = 783
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 277/547 (50%), Gaps = 55/547 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K + + + +Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVVKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT +A + + +ID A+A +A+ + G P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAADDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL N + V + + I
Sbjct: 297 TFYKERTVYLPNAY------HPLL-----------------------NKDTVVANTIEFI 327
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++RD L + TTHY +L NA+ EF + TL PTY++L G G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHAE 574
I+K +G II +A+ ++ E +S + + + E+R +LE R A + H +
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDD 555
Query: 575 IMDLYRE 581
+ Y++
Sbjct: 556 LERQYQQ 562
>gi|297529147|ref|YP_003670422.1| MutS2 family protein [Geobacillus sp. C56-T3]
gi|297252399|gb|ADI25845.1| MutS2 family protein [Geobacillus sp. C56-T3]
Length = 792
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 275/528 (52%), Gaps = 64/528 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L++T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 48 LEEVAAWLDETDEAAAVLRLAGYAPLDGAV--DIRPHLKRAAIGGTLSPQELLEVAATSA 105
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+++++ +AQ + +IT R R + +K ++
Sbjct: 159 SDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 274 LARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V ESLVL DE+G+GTDP EG ALA +IL + R V TTHY++L
Sbjct: 413 HVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYSELKAYGYNRPGVV 472
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV 520
>gi|418316581|ref|ZP_12928018.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
gi|365240860|gb|EHM81619.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
Length = 782
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|289422692|ref|ZP_06424532.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
gi|289156871|gb|EFD05496.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
Length = 807
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 298/587 (50%), Gaps = 62/587 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
+G +++K PF K + + L T A +++ + + I +I + A G +L
Sbjct: 26 LGRNIIKKLN-PFSKYDQVKEALEETTEAQSILIKRGHVSMQGIHNIEDMAKRADIGGVL 84
Query: 61 SPSEICAVRRTLRAVNNVWKKLT-----------EAAELDGDSLQRYSPLLELLKNCNFL 109
+ + V T+RA + L+ E + D + + RY P+++ + ++
Sbjct: 85 DNASLIKVADTMRATRILSNLLSGDIKVETFGNAENSNKDKEEVTRY-PIIQTMAQSLYV 143
Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
++E+ I I + + D AS +L +IR + +N+ S L + + +
Sbjct: 144 HRDVEDAIYNAIVSDIEV-SDNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQD 202
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+I+ R R + +KA ++ ++ GI + S SGAT F+EP VE NN +L E
Sbjct: 203 AIISMRGDRFVIPVKAEYRSVIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETE 261
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + + RE+ + + +D AFA+ + M V PIL+ D
Sbjct: 262 EIERILAELSGMVGEVARELISNQEILARLDFAFAKGKLSIAMKAVDPILNR------DK 315
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
S I +HPL+ K+ V N+ + +G DF
Sbjct: 316 SFRIVKGRHPLI----------------DKKTVVANT-VYLGK------DFSS------- 345
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
++ITGPNTGGKT ++K +GL SLM++ GL++PA + FD + ADIGD+QS+
Sbjct: 346 -----LLITGPNTGGKTVTIKMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSI 400
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ IVDI++ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R L +
Sbjct: 401 EQNLSTFSSHMTSIVDIVDRVTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCI 460
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENAA EF +ETL PTYR+L G G SNA I++ +G + +I
Sbjct: 461 ATTHYSELKKYALAKKGVENAAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVI 520
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
A+ ++ E + ++ QS+ + R K E + A ++ +EI
Sbjct: 521 LNAKFYMDNDDIELE-----DVLQSVEKNRLKTEEELSRAEAMRSEI 562
>gi|418953440|ref|ZP_13505433.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
gi|375375040|gb|EHS78649.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
Length = 717
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|451345992|ref|YP_007444623.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
gi|449849750|gb|AGF26742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
Length = 785
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 265/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|253731756|ref|ZP_04865921.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253724485|gb|EES93214.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 782
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|418873293|ref|ZP_13427600.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
gi|375366347|gb|EHS70347.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
Length = 717
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|21282756|ref|NP_645844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MW2]
gi|49485982|ref|YP_043203.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MSSA476]
gi|297208218|ref|ZP_06924648.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912295|ref|ZP_07129738.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|418934045|ref|ZP_13487869.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987965|ref|ZP_13535638.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|448742615|ref|ZP_21724554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
gi|38604916|sp|Q8NX56.1|MUTS2_STAAW RecName: Full=MutS2 protein
gi|56749203|sp|Q6GA70.1|MUTS2_STAAS RecName: Full=MutS2 protein
gi|21204194|dbj|BAB94892.1| MutS-like protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244425|emb|CAG42853.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MSSA476]
gi|296886957|gb|EFH25860.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886541|gb|EFK81743.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|377719753|gb|EHT43923.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|377771825|gb|EHT95579.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|445546653|gb|ELY14940.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
Length = 782
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSVKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|15895607|ref|NP_348956.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum ATCC 824]
gi|337737556|ref|YP_004637003.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
gi|38604976|sp|Q97GM6.1|MUTS2_CLOAB RecName: Full=MutS2 protein
gi|15025349|gb|AAK80296.1|AE007734_10 DNA mismatch repair protein mutS, YSHD B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|336292751|gb|AEI33885.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
Length = 788
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 276/531 (51%), Gaps = 60/531 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
P+G SL E ++ + +T A ++ + P + + D+ ++ A G L+P ++ V
Sbjct: 36 PYG-SLYEVKEHIEETKEAFELLMKKGAPPFEGAY--DVTEAVSMAEKGFSLAPGQLLKV 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
LR + ++ E + Y + ++ L +E+ I F I
Sbjct: 93 GSMLRCARKFKEYISHKEEEES-----YRIIEDICSGIIPLKNIEDNI-FNAIIGEEEIS 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKASH 186
D+AS L IR R++++ ++ +K KV A + + + + L T R R + +KA +
Sbjct: 147 DKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKAEY 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P G+ + SS+GAT F+EP G V NN L E AE IL L+A I KS
Sbjct: 203 KAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKSIV 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+K V E+D FA+A +A ++ P HV+ I+I +HPL+
Sbjct: 262 AVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VP++I + E +VITGPNTGGKT
Sbjct: 310 ---------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL +M+ +GL +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 341 TLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRII 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 401 DDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENV 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+K + +
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISK 511
>gi|418643039|ref|ZP_13205225.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|418649444|ref|ZP_13211472.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
gi|375016152|gb|EHS09796.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|375029817|gb|EHS23142.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
Length = 717
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|417895692|ref|ZP_12539670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
gi|341841369|gb|EGS82830.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
Length = 782
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINKT--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|238925261|ref|YP_002938778.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
gi|259511157|sp|C4ZI07.1|MUTS2_EUBR3 RecName: Full=MutS2 protein
gi|238876937|gb|ACR76644.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
Length = 792
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 264/538 (49%), Gaps = 66/538 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELL 103
DI G LN+ +LL + V + ++A + L G ++ S L + +
Sbjct: 79 DIGGALNTT---ELLRICSLLEVAKRVKAYGRSAMDNEKQDSLSGLFAGIEPVSALCDEI 135
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
K C L+E E I D AS +L IR + + + + L K+
Sbjct: 136 KRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTR 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ ++T R R C+ +KA K +P G+ + SS+G+T F+EP V NN L
Sbjct: 182 TYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELF 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
E E IL+ L+ ++A + ++ + + E+D FA+A A+ +GV P ++ H
Sbjct: 241 IKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH 300
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
INI +HPLL + VPI
Sbjct: 301 ------INIRKGRHPLLDAKKV-----------------------------------VPI 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
D+++ + + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIG
Sbjct: 320 DVRLGEDYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQ+LSTFS H++ IV ILE SL L DE+ SGTDP+EG ALA SIL L
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQY 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+ + TTHY++L ENA EF++ETL PTYR+L G G SNA I+ +G
Sbjct: 440 GAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGL 499
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
D II+ A+ R +L SL +R+ +E + S AEI L ++
Sbjct: 500 DENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQ 552
>gi|429766788|ref|ZP_19299030.1| MutS2 family protein [Clostridium celatum DSM 1785]
gi|429182934|gb|EKY24010.1| MutS2 family protein [Clostridium celatum DSM 1785]
Length = 785
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 288/572 (50%), Gaps = 63/572 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P+ KS+ E +K L +T+ AL ++ + P + D + A G +L+P ++ +
Sbjct: 36 PY-KSIYEVEKKLEETNEALDILIRKGTP-PFEGLHDTRAEIARAAKGGVLTPGQLIKIG 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
LR + + E G Y L +L L LE +I I + I D
Sbjct: 94 SMLRCSRRFKEYVVRKEEEIG-----YKHLEDLAYILVPLKGLESEIDNAIISEEEIS-D 147
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
+AS L IR R+++ +S +++ I +A + L T R R + +KA +K
Sbjct: 148 KASGTLYNIR----RSLKEKNSSVREKINSIVRANSKYLQDSLYTMRGDRYVIPVKAEYK 203
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SS+GAT F+EP V NN L E AE ILS L++++ +
Sbjct: 204 GAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSELSSKVYNNIDV 262
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + E+D FA+ +A ++ + P + D S +I G KHPL+
Sbjct: 263 VTSNSNILKELDFIFAKGKYASSLNAILP------KIRNDKSFDIIGGKHPLI------- 309
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP D+ + E ++ITGPNTGGKT +
Sbjct: 310 ----------------------------DQKIVVPSDVYLGDEFTTLMITGPNTGGKTVT 341
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL LM+ +GL +PAK+ + ++ I ADIGD QS+EQ+LSTFSGH++ IV IL+
Sbjct: 342 LKTVGLLHLMALSGLLIPAKDGSSVGFYKEIFADIGDEQSIEQSLSTFSGHMTNIVTILD 401
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+SLVL DE+GSGTDP+EG ALA +I++ LRDR + TTHY++L + E
Sbjct: 402 DADGDSLVLFDELGSGTDPAEGSALAIAIIETLRDRGARIIATTHYSELKGYALRTIGVE 461
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE---R 542
NA+ EF +ETLRPTYR+L G G SNA I++ +G +I++A+ + E L+ E R
Sbjct: 462 NASVEFDVETLRPTYRLLIGIPGKSNAFEISRRLGLSNDVIEKAKNSMSKENLQFEDLIR 521
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAE 574
KS L E +KL +A + + E
Sbjct: 522 DLQEKSILANRDAREAKKLRDEAENLKNKYNE 553
>gi|123965482|ref|YP_001010563.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9515]
gi|123199848|gb|ABM71456.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9515]
Length = 803
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 190/595 (31%), Positives = 295/595 (49%), Gaps = 72/595 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG VV + +IP E S++LL +T + ++ + + S + DI + G
Sbjct: 41 MGKNVVLQFEIP--TEYEISRRLLKETIEINELEKNLDKSISFSGVFDICKNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+++ S++ + T+ A N+ K L LD + S L+ L + N ++E+ +
Sbjct: 99 VINSSDLLEIAETISASRNLKKIL-----LDFEQRPFISAFLKGLIDHN---QIEKILKN 150
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
I+ I DRAS+ L +R E L+ K I ++ R R
Sbjct: 151 GIESNGRI-SDRASQKLANLRQELLSKKSERRVLVNKFIQNNLPY--IQDTIVGDRYGRP 207
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAIL 234
+ IK + GI + S+SG T ++EP+ V N ME R++ EE +L
Sbjct: 208 VLAIKVQYAEKFK-GIIHDSSASGNTIYLEPESIVLKGNKIASMEARVA----GEEFKLL 262
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ I + + + + + +L + + R+ ++ W+ G PI+ + VS + G
Sbjct: 263 KEWSHIIRDNNQSLLEMSNILLRAEFSLTRSRYSNWIGGNAPIVENSPIVS------LMG 316
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
HPLL+ + + +A PV ID ++ T+VV
Sbjct: 317 FSHPLLIWENKKKQAAK----------------------------PVSIDFHIDRNTKVV 348
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++K LG+A LM+++GL++P+ P +P+ I DIGD QSLE NLST
Sbjct: 349 AITGPNTGGKTVALKGLGIALLMARSGLFIPSIQKPIIPFCPNIFVDIGDDQSLEGNLST 408
Query: 415 FSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
FSGHI RI +ILE ++ + S+VL+DEIGSGTDPSEG ALA ++L+ + + TT
Sbjct: 409 FSGHILRIKNILEALNNKKGFSVVLLDEIGSGTDPSEGTALAIALLKEFAIVSDITLATT 468
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY D+ LK D RFEN + F E+ +P Y + WG G SNAL+I+K IG + KI+ A
Sbjct: 469 HYGDIKALKYSDNRFENVSVAFDEESFKPKYTLNWGIPGRSNALSISKRIGINEKILNNA 528
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLY 579
L+P ++ + + + L EER K + A AA LH EI + Y
Sbjct: 529 SNY---LKP-KEVENINNIIKGLEEERLKQQKSAEEAAELIARTEILHDEIKNKY 579
>gi|325681531|ref|ZP_08161056.1| recombination and DNA strand exchange inhibitor protein
[Ruminococcus albus 8]
gi|324106798|gb|EGC01089.1| recombination and DNA strand exchange inhibitor protein
[Ruminococcus albus 8]
Length = 801
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 281/565 (49%), Gaps = 68/565 (12%)
Query: 24 LNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
+ +T++AL M ++ +I +++ LN A +G LS E+ +++ L N + +
Sbjct: 49 VGKTASALEMSIKYGTPGFYSINNVSASLNRAKAGGTLSLGELLEIKKVLGQTNELTRWF 108
Query: 83 TEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+A D S L E L N + LE I +D + L D AS +L IR +
Sbjct: 109 EQAE----DKSTPLSYLFEQLFPNKSLWQRLETAI---LDSENLS--DDASPELRSIRNK 159
Query: 142 RKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ E LD ++K + Q + + + ++T R R V +K K + G+
Sbjct: 160 IAKAGLKIRETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHG 214
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S++G+T F+EP VE NN L E E IL+ + E A + +I+ D ++
Sbjct: 215 TSATGSTLFIEPISVVEANNDIRILQGKEQDEIHRILTEFSKECAMMQPQIESSYDAAVK 274
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+DL FA+A M V P +S D I + +HPL+ + N
Sbjct: 275 LDLYFAKANLGAKMRAVNP------EISDDGVIVLNKARHPLI-------------DENK 315
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
+ VPI+ V+VITGPNTGGKT ++KT+GL +LM
Sbjct: 316 V----------------------VPINFSSGESYNVLVITGPNTGGKTVTLKTVGLLTLM 353
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+ GL +PA + R+ + ILADIGD QS+EQ+LSTFS H+ + +ILE ESLVLI
Sbjct: 354 TMCGLLIPASDGCRISVYKKILADIGDRQSIEQSLSTFSSHMGNVREILEKADSESLVLI 413
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+GSGTDP EG ALA SI++ LR V TTHY ++ ENA+ EF +ET
Sbjct: 414 DELGSGTDPVEGAALAVSIIERLRQFGATVVTTTHYQEIKLYALDTDGVENASCEFDVET 473
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLME 556
++PTY+++ GS G SNA I+K++G D II A+ L+ + +R+ E + +L
Sbjct: 474 MKPTYKLVIGSPGKSNAFAISKNLGIDDDIIAYAEGLIS------EDNRRFETIIDNLER 527
Query: 557 ERRKLESQARTAASLHAEIMDLYRE 581
R +LE R A AE L E
Sbjct: 528 ARIQLEENNRLAEKYRAEAEKLRNE 552
>gi|413933876|gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
Length = 864
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 292/565 (51%), Gaps = 54/565 (9%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
S E+SQ LL +T AA+ ++ + +D S ++ I ++S G ++ E AV +
Sbjct: 85 SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTIESAIHSVSGGAVIKGLEAMAVTSLMM 144
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V ++ + A +LD S R + L E + + L + I +D + D AS
Sbjct: 145 FVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTASP 203
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
+L R + +R L L+ K+ + + I R C+ + DG
Sbjct: 204 ELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF-DG 260
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLM 252
+ L+ S S A +EP AV N+ E++ S + +A+ E +LS LT +I I+ L+
Sbjct: 261 LLLS-SRSDAGSMIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQNLL 318
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK------------ 296
+++D ARA ++ DG P L V+ + +I+ I
Sbjct: 319 QETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWKLY 378
Query: 297 -----HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTVGS 331
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 379 MPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRVSQ 438
Query: 332 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 391
L K D PVP+D + ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A +
Sbjct: 439 LEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPVK 495
Query: 392 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 451
+PWF+ + ADIGD QSL Q+LSTFSGH+ +I I + ESLVL+DE+G+GT+P EG A
Sbjct: 496 IPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEGAA 555
Query: 452 LATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
L S+L+ + L + TTH+ +L LK + FENA EF E L+PT++ILWG G
Sbjct: 556 LGMSLLESFAEAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGIPG 615
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLV 535
SNA+NI + +G I++ +++L+
Sbjct: 616 RSNAINITERLGLPLDIVESSRRLL 640
>gi|403070305|ref|ZP_10911637.1| DNA mismatch repair protein [Oceanobacillus sp. Ndiop]
Length = 781
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 265/534 (49%), Gaps = 60/534 (11%)
Query: 7 QKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
Q +Q+ L E +L +T A ++++ + + L I DI L + G +LS E
Sbjct: 30 QVSQLKPSTDLAEVIQLQQETDEAASIVRLDKAIPLGGITDIRESLKRSAIGGILSGEE- 88
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
C L N V+ A ++ L EL+ L ELE+ I CID
Sbjct: 89 C-----LDVANTVYGGRQVKAFIENLEEPELPVLEELVDRITPLRELEQHIKSCIDDHGH 143
Query: 126 IILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+ +D AS L IR+ R E L+S + ++ + A ++T R R +
Sbjct: 144 M-MDSASAKLRSIRSSIRTYENRIREKLESYTRNNSSMLSDA------IVTIRNDRYVLP 196
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+K ++ + GI + SSSG T FMEPK V+ NN + E E IL L+ I
Sbjct: 197 VKQEYRGTI-GGIVHDQSSSGQTLFMEPKAVVDLNNQLHEAISKEQQEIEQILKELSEHI 255
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A ER++ + + +ID FARA M P ++ + ++ + +HPL+
Sbjct: 256 ASFERDLYENVTVLGKIDFMFARAKLGNLMKASRPKINDRGYIKMQQA------RHPLI- 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
P+ V N D+++ +VITGPNT
Sbjct: 309 ---------------PINEVVAN-------------------DVEIGKTYTSIVITGPNT 334
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++K +GL +LM+++GL +PA + + F+ + ADIGD QS+EQNLSTFS H++
Sbjct: 335 GGKTVTLKMIGLCTLMAQSGLQIPALDGCEMAVFEEVFADIGDEQSIEQNLSTFSSHMTN 394
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IVDI++ V SLVL DE+GSGTDP EG ALA SIL + R + TTHY +L
Sbjct: 395 IVDIIKKVDYRSLVLFDELGSGTDPQEGAALAMSILDEVVSREARVIATTHYPELKAYGY 454
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF++ETL+PTYR+L G G SNA I+K +G D +II RA+ LV
Sbjct: 455 NRENVVNASVEFNVETLKPTYRLLIGVPGRSNAFEISKRLGLDEQIIDRAKGLV 508
>gi|291545360|emb|CBL18468.1| MutS2 family protein [Ruminococcus sp. SR1/5]
Length = 793
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 193/600 (32%), Positives = 289/600 (48%), Gaps = 95/600 (15%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNS 53
+ KA P GK L EE + + QT ALA + + + +++DI G L
Sbjct: 18 LTDKASSPMGKDLCRKLTPSTDIEEIRAMQLQTHDALARLFKKGGISFGSVKDIRGTLKR 77
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTE 111
G L+ E+ +V L V K + + DG DSL LE L T
Sbjct: 78 LTVGSALNAPELLSVCSLLENTGRV-KAYSRSDRDDGMTDSLDGMFAALEPL------TP 130
Query: 112 LEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGID 167
L +I CI + I D AS L IR A R L SL+ A Q
Sbjct: 131 LSTEIRRCILSEDEIS-DDASSTLRQIRRSIKATNDRIHTQLSSLVAGSARNYLQ----- 184
Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+IT R R C+ +KA +K +P G+ + S++G+T F+EP V+ NN L E
Sbjct: 185 DSVITMRDGRYCIPVKAEYKGQVP-GMIHDQSATGSTLFIEPMAVVKLNNDIRELELKEQ 243
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
E IL+ L+ ++A I + ++++D FARA A M+ P+ +++
Sbjct: 244 KEIEVILASLSQQVAAELEAIHADLSIMVQLDFIFARAALAMDMNASEPVFNTEGR---- 299
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
I + +HPL+ D + + VPIDI++
Sbjct: 300 --IRLRQARHPLI--------------------DKKKA---------------VPIDIRL 322
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
+ ++V+TGPNTGGKT S+KT+GL ++M ++GL++PA + L F + ADIGD QS
Sbjct: 323 GDDFDLLVVTGPNTGGKTVSLKTVGLLTMMGQSGLHIPALDRSELALFREVYADIGDEQS 382
Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
+EQ+LSTFS H++ +V L+ ++SLVL DE+G+GTDP+EG ALA +IL +L ++
Sbjct: 383 IEQSLSTFSSHMTNVVSFLKSADQDSLVLFDELGAGTDPTEGAALAIAILSHLHEQGIRT 442
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY++L ENA EF +ETLRPTYR+L G G SNA I+ +G I
Sbjct: 443 MATTHYSELKIYALSTPGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDFI 502
Query: 528 IQRAQKLV-----------------------ERLRPERQQHRKSELYQSLMEERRKLESQ 564
I +A++ + ER R + + EL +SL E+ KL+ +
Sbjct: 503 IDKAKEQISEQDESFEDVLTSLEQSRVTIENERAEIARYKEQVEELKKSLQEKEEKLDER 562
>gi|387780256|ref|YP_005755054.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
gi|416839782|ref|ZP_11903140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|416847321|ref|ZP_11907055.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|323440694|gb|EGA98404.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|323442363|gb|EGA99992.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|344177358|emb|CCC87824.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
Length = 782
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|282916393|ref|ZP_06324155.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283770204|ref|ZP_06343096.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
gi|282319833|gb|EFB50181.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283460351|gb|EFC07441.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
Length = 782
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|168211671|ref|ZP_02637296.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
gi|170710370|gb|EDT22552.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
Length = 786
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 243/450 (54%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNYIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLIDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|78778605|ref|YP_396717.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
gi|78712104|gb|ABB49281.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
Length = 803
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 308/631 (48%), Gaps = 90/631 (14%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + +IP E +++LLN+T + + + + S + DI+ + G
Sbjct: 41 MGKRAILSFKIP--SEYEVAKRLLNETVEITELENNLEKSISFSGVCDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++ SE+ + T+ A N+ K L LD + S + L+ + N T L K G
Sbjct: 99 VILSSELLEIAITISAARNLKKIL-----LDFEKRPFISSFTKNLIDHHNIETIL--KNG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS L ++R E L KK+ +I I K L
Sbjct: 152 IESNGR---ISDDASSKLSILRKEL---------LSKKLERKILVDKFIQKNLAYLQDTI 199
Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
I R R + +K ++ K+ GI + SSSG T + EP V N L A
Sbjct: 200 IGDRYGRPVLAVKVNYIDKF---KGIIHDSSSSGNTVYFEPDSVVTKGNKIASLEARIAA 256
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L + I+ + + + +L ++ A R+ +++W+ G PI +S
Sbjct: 257 EEFKLLQKWSQVISDNSENLIAMASILLRLENALTRSRYSKWIGGKTPIFEENPIIS--- 313
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+ G HPLL+ + + S PV +D ++
Sbjct: 314 ---LIGFSHPLLIWENKKKGSPP----------------------------PVAVDFQIN 342
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSL
Sbjct: 343 RNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSL 402
Query: 409 EQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
E+NLSTFSGHISRI +ILE + S+VL+DEIGSGTDP EG ALA ++L+ ++
Sbjct: 403 EENLSTFSGHISRIKEILESLDNRRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSD 462
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ + TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG +
Sbjct: 463 ITLATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGLNE 522
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTS 585
I+ A L+P+ + S + + L EER K ++ A AA L A L+ E +
Sbjct: 523 SILNEAANY---LKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN 578
Query: 586 ASISVYRYQFAVTSTLSKVDFDAIPNIDQCK 616
Y YQ K++ + I I++ K
Sbjct: 579 -----YEYQ--------KINAEKIQEIERYK 596
>gi|418312639|ref|ZP_12924148.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
gi|365238284|gb|EHM79121.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
Length = 782
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|253733620|ref|ZP_04867785.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728419|gb|EES97148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
Length = 782
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|386728823|ref|YP_006195206.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
71193]
gi|387602416|ref|YP_005733937.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478481|ref|YP_006709911.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
gi|418309746|ref|ZP_12921297.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|418978614|ref|ZP_13526414.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|283470354|emb|CAQ49565.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237869|gb|EHM78708.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|379993438|gb|EIA14884.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|384230116|gb|AFH69363.1| MutS [Staphylococcus aureus subsp. aureus 71193]
gi|404439970|gb|AFR73163.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
Length = 782
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKRADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|336114602|ref|YP_004569369.1| MutS2 family protein [Bacillus coagulans 2-6]
gi|335368032|gb|AEH53983.1| MutS2 family protein [Bacillus coagulans 2-6]
Length = 741
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 256/503 (50%), Gaps = 61/503 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS I DI L A G L+P E+ + T+ V+ K+ E + +L P+L
Sbjct: 20 LSGIYDIRRHLKRAAIGGRLNPQELVQIASTIH-VSRTMKRFIEGIAEEETAL----PIL 74
Query: 101 ELLKNCN---FLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLL 153
L + LT LE I +D I LD ASE L IR +R E L+ +
Sbjct: 75 TLTSMADRIAVLTPLEHDIRNAVDENGEI-LDTASETLRQIRHGLRGTERRIREKLEGYI 133
Query: 154 K-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
+ K AA++ + +IT R R + +K ++ GI + SSSG T F+EP+
Sbjct: 134 RGKNAAKM-----LSDAIITIRNDRYVIPVKQEYRANY-GGIVHDQSSSGQTLFIEPQSV 187
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
V+ NN E E ILS L+A +A + E+ +++ + + D FA+A + + +
Sbjct: 188 VDLNNQLREWHLKEQQEIERILSELSAAVAAAGGELNTIVEILADFDFMFAKALYGRSIK 247
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
G P++++ +I + +HPLL P
Sbjct: 248 GSKPVINNHG------AIRMFKARHPLL----------------P--------------- 270
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
+D VP DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +
Sbjct: 271 ----ADKVVPNDITLGQDYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDGSEM 326
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
F + ADIGD QS+EQ+LSTFS H++ IV+IL+ V +SLVL DE+G+GTDP EG AL
Sbjct: 327 AVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEGAAL 386
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A SIL + R V TTHY +L NA+ EF +ETL PTYR+L G G S
Sbjct: 387 AISILDEVYKRGARVVATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVPGRS 446
Query: 513 NALNIAKSIGFDRKIIQRAQKLV 535
NA I++ +G +I AQ L+
Sbjct: 447 NAFEISRRLGLSPSVIAHAQSLI 469
>gi|256751292|ref|ZP_05492172.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749847|gb|EEU62871.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 791
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 295/572 (51%), Gaps = 60/572 (10%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKASDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + LE++I I +
Sbjct: 93 LKIKKFLNLVSKIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKSLRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V ++D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF++ETL+PTY+++ G G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFNVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
++ + +RR+LE + A L ++
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDV 547
>gi|417799021|ref|ZP_12446173.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
gi|334274913|gb|EGL93219.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
Length = 782
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|326391467|ref|ZP_08213002.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
gi|392940299|ref|ZP_10305943.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
siderophilus SR4]
gi|325992493|gb|EGD50950.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
gi|392292049|gb|EIW00493.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
siderophilus SR4]
Length = 791
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 294/572 (51%), Gaps = 60/572 (10%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKASDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + LE++I I +
Sbjct: 93 LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKALRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V ++D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF +ETL+PTY+++ G G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
++ + +RR+LE + A L ++
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDV 547
>gi|373107351|ref|ZP_09521650.1| MutS2 family protein [Stomatobaculum longum]
gi|371651181|gb|EHO16615.1| MutS2 family protein [Stomatobaculum longum]
Length = 788
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 293/582 (50%), Gaps = 72/582 (12%)
Query: 3 HAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLS 61
HA+V +P E ++ +T AAL+ ++ + L LS + D++ + G LS
Sbjct: 32 HALVPMTDLP------EIERAQAETEAALSRIRMKGELRLSGLRDVSASVKRLDVGGTLS 85
Query: 62 PSEICAVRRTL----RAVNNVWKKLTEAAELDGDSLQ-RYSPLLELLKNCNFLTELEEKI 116
SE+ A+ L RA N E AE D D+L+ ++ L L K + ++
Sbjct: 86 TSELYAISTLLDLSERARNYGAH---EEAEPDPDALEASFTALSPLPKE-------KREL 135
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
CI + L+ D AS +L IR + K E + S L++ + + ++T R
Sbjct: 136 KHCILSEELVA-DTASAELSRIRRQMKTADERMHSALQEEINR--HKSYLMDTIVTMRNG 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
C+ +K+ +K LP G+ + SS+G+T F+EP AV NN L +E E T IL+
Sbjct: 193 SYCLAVKSEYKSKLP-GVVHDQSSTGSTVFIEPLVAVRLNNEYRELVIAEQQEITKILAA 251
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L+A + + + +D FA+A A M P+ +++ V I+ +
Sbjct: 252 LSALLTPCTAALLANQKILAALDFVFAKARLASSMQASKPLFNTERIV------EIKDGR 305
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPL+ P D VPI I++ + +++I
Sbjct: 306 HPLI----------------P-------------------RDKVVPISIRIGEDFTLLII 330
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT S+KT+GL +LM +AGL++PA RL F + ADIGD QS+EQ+LSTFS
Sbjct: 331 TGPNTGGKTVSLKTMGLFTLMGQAGLHIPAFQGSRLAVFRDVFADIGDEQSIEQSLSTFS 390
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GH+ +V+IL ++L L DE+G+GTDP+EG ALA +IL +L++ V TTHY++L
Sbjct: 391 GHMKNVVEILASADSDALCLFDELGAGTDPTEGAALAIAILSFLQNIGARTVATTHYSEL 450
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA+ EF + TLRPTYR+L G G SNA I+K +G II+ A+ +
Sbjct: 451 KVYALSTKGVENASCEFDVATLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEEAKTHI- 509
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
E+ +L L +RR +E++ + + EI +L
Sbjct: 510 ----EQNDAAFEDLLTRLEADRRTIEAERKEILAYRTEIEEL 547
>gi|384867975|ref|YP_005748171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
gi|312438480|gb|ADQ77551.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
Length = 782
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|257425195|ref|ZP_05601621.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257427858|ref|ZP_05604256.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257430493|ref|ZP_05606875.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433255|ref|ZP_05609613.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257436094|ref|ZP_05612141.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282910719|ref|ZP_06318522.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913919|ref|ZP_06321706.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282918842|ref|ZP_06326577.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282923964|ref|ZP_06331640.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|293526498|ref|ZP_06671183.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|417889008|ref|ZP_12533107.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
gi|257272171|gb|EEV04303.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257274699|gb|EEV06186.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278621|gb|EEV09240.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281348|gb|EEV11485.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257284376|gb|EEV14496.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282313936|gb|EFB44328.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|282316652|gb|EFB47026.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282321987|gb|EFB52311.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282325324|gb|EFB55633.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|290920570|gb|EFD97633.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|341853076|gb|EGS93958.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
Length = 782
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|308174555|ref|YP_003921260.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM 7]
gi|307607419|emb|CBI43790.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM
7]
Length = 785
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 263/518 (50%), Gaps = 58/518 (11%)
Query: 21 QKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
QK L++ A A+M+ + + DI L A G +L+P+E + L AV +
Sbjct: 44 QKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
+++ E DG S+ PL++ + L +LE +I CID + LD AS L I
Sbjct: 104 HFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPALRGI 157
Query: 139 RAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + + R + L+S+L+ +A + ++T R R + +K ++ GI
Sbjct: 158 RTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY-GGI 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI ++
Sbjct: 213 VHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQNVEV 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 273 LQTLDSIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL-------------- 312
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
P V N DI++ + +VITGPNTGGKT ++KTLGL
Sbjct: 313 --PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKTLGLL 351
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV IL+ VS SL
Sbjct: 352 TIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVSENSL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL DE+G+GTDP EG ALA SIL + + TTHY +L NA+ EF
Sbjct: 412 VLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 472 IETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|288553660|ref|YP_003425595.1| recombination and DNA strand exchange inhibitor protein [Bacillus
pseudofirmus OF4]
gi|288544820|gb|ADC48703.1| MutS2 recombination and DNA strand exchange inhibitor protein
[Bacillus pseudofirmus OF4]
Length = 788
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 266/520 (51%), Gaps = 54/520 (10%)
Query: 20 SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVN 76
SQK ++ + L + PL I D+ A G L+ E+ + T+ R +
Sbjct: 45 SQKETSEGATVLRLKGHVPL--GGIFDVTAHAKRAQIGGALAAGELIEIASTIYGGRQLK 102
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ + E EL+ L Y+ +E L T++E + CID + LD AS L
Sbjct: 103 KFIETMVEEEELELPHLYYYTQQIEPL------TDVERAVKQCIDDNGHV-LDSASPALR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + + ++ S L+ + + ++T R R + +K ++ GI
Sbjct: 156 TIRQQVRSYESSVRSKLESITRSSNTQKMLSDAIVTIRNDRFVIPVKQEYRSAF-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ V NN E E IL+ L+A I++ I ++++
Sbjct: 215 DQSASGATLFIEPQAIVTINNQLREAKVKEAHEVERILAELSALISEHAEAILINLEQLA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D F++A +A+ + P+L+ + + I+++ +HPLL +
Sbjct: 275 QLDFIFSKAHYAKRIKATAPLLNDRGY------IHLKRARHPLLADEEV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VPID+ + E R ++ITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPIDVILGDEYRSLIITGPNTGGKTVTLKTVGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++P + F I ADIGD QS+EQ+LSTFS H++ IVDIL V +SLVL
Sbjct: 354 MAQSGLHVPVDEESEVAVFKQIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDFQSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL + R V TTHY++L NA+ EF +E
Sbjct: 414 FDELGAGTDPTEGAALAISILDDVYKRGACVVATTHYSELKGYAYNREGAMNASVEFDVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
TLRPTYR+L G G SNA I++ +G D +II+ A++ ++
Sbjct: 474 TLRPTYRLLIGVPGRSNAFAISRRLGLDERIIESAKEQID 513
>gi|386830679|ref|YP_006237333.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|385196071|emb|CCG15689.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
Length = 782
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEECTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|406669612|ref|ZP_11076880.1| MutS2 family protein [Facklamia ignava CCUG 37419]
gi|405582954|gb|EKB56928.1| MutS2 family protein [Facklamia ignava CCUG 37419]
Length = 786
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 289/566 (51%), Gaps = 59/566 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQ 58
MGH V Q+P K E Q+LL++T + ++ S P L + I ++ + G
Sbjct: 27 MGHQFVSD-QLPQTKQ-ETIQRLLDETEEVVRIL-SLPATLPIPRISNVRESIKRVEIGA 83
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L+ E+ + + L + + + ++ E + Q + L E ++ L E+E++I
Sbjct: 84 RLNGKELAELGKLLSTTSQLVRFFSQLEENN----QFFPQLNEWVQKIVSLPEIEQRIDQ 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
+D IILD AS +L IR + R +++ L + +A + LIT R R
Sbjct: 140 TVDSDG-IILDTASSELNRIRRAQLRTEQSIRETLNTIIKS--KANLLSDTLITIRNQRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +K ++ G + SS+G T F+EP+ NN L + E E IL +T
Sbjct: 197 VIPVKTDYRAQF-KGTVYDQSSTGQTLFIEPQSVTNLNNQLAALRSEEKVEVDRILDEVT 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
++ EI + +D ARA ++ ++G P LS + V I +HP
Sbjct: 256 EQLLPYLSEINQNHYALGYLDYVQARAEYSLAIEGTKPTLSPEREV------RIWQARHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
L+ +P K V N DI + + + ++ITG
Sbjct: 310 LI---------------DP-KQIVAN-------------------DILIGGDYQSLIITG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT +KTLG+ +M ++GLY+PA+ ++ FD + ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTILLKTLGMLQIMGQSGLYIPAEEASQIGIFDQVYADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ + +SL+L+DE+GSGTDP EG ALA +IL Y + + + TTHY +L
Sbjct: 395 MTNIVSIIQRATYQSLILLDELGSGTDPQEGAALAMAILDYFQSVGSIVLATTHYPELKV 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
+ +NA+ EF+ +TL PTYR+L G G SNAL I+K +G II++AQ V++
Sbjct: 455 YANHAANTQNASMEFNDQTLSPTYRLLIGIPGRSNALEISKRLGLRSDIIEKAQSGVQQ- 513
Query: 539 RPERQQHRKSELYQSLMEERRKLESQ 564
E QQ +++ L +ERR++E +
Sbjct: 514 --ESQQ--LNDMVMQLDQERREMEEE 535
>gi|418614027|ref|ZP_13177017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
gi|374821896|gb|EHR85937.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
Length = 782
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 261/500 (52%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL ++ +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLLDKDTV------VANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|418951998|ref|ZP_13504057.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
gi|375370325|gb|EHS74140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
Length = 782
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 286/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V + +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 MEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDCLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|417899642|ref|ZP_12543544.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
gi|341844570|gb|EGS85782.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
Length = 688
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 286/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V + +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 MEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|327475227|gb|AEA77208.1| MutS2 [Bacillus sp. 15.4]
Length = 784
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 264/524 (50%), Gaps = 60/524 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLEE ++ +T A +++ + L I DI + A G +LSP E V T+ A
Sbjct: 39 SLEEVIRIQEETDEAAGILRLKGHAPLGGIFDIRPAVKRATIGGMLSPQEFVQVASTIYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + + E D D L L E + LT LE KI +D ILD AS+
Sbjct: 99 SRQIRLFMEDLEEEDIDLL----ILSEKVSEMMVLTPLEHKIRAVVDENG-AILDSASDP 153
Query: 135 LELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK--Y 188
L IR++ + N E L+ +++ AQ + I IT R R + +K ++ Y
Sbjct: 154 LRQIRSQIRANEGRIREKLERMIRSSNAQKMLSDAI----ITIRNDRYVIPVKQEYRGNY 209
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SSSG T F+EP+ V NN L E E IL+ LT E++ ++
Sbjct: 210 ---GGIIHDQSSSGQTLFIEPEVIVTLNNALRELKLKEGLEIERILTELTVEVSGYSEDL 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + +ID F +A + + + G P ++ + + + + +HP+L
Sbjct: 267 LTIVAILADIDFMFTKAKYGKSIKGTKPEINGEQVLKLNRA------RHPML-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P++ V N DI++ + +VITGPNTGGKT ++
Sbjct: 313 --------PIEEAVAN-------------------DIELGKDFSSIVITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +AGL +PA + ++ F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 346 KTVGLLTLMGQAGLQIPALDGSKMGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGK 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V ESLVL DE+G+GTDP EG ALA SIL + R V TTHY +L N
Sbjct: 406 VDHESLVLFDELGAGTDPQEGAALAISILDEVHQRGAKVVATTHYPELKAYGYNRDGVIN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
A+ EF +ETL PTY++L G G SNA I+K +G ++I RA+
Sbjct: 466 ASVEFDVETLSPTYKLLIGVPGRSNAFEISKRLGLADRVINRAK 509
>gi|352518027|ref|YP_004887344.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
gi|348602134|dbj|BAK95180.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
Length = 792
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 272/555 (49%), Gaps = 76/555 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ IE+I + G L+ E+ + R L V L E E D R
Sbjct: 68 IPKIENIQAHMKRIEIGADLNGVELAQISRVLTTTAEVNTFLEELKE-DETPFNRLYAWQ 126
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKV 156
E L L L +++ ID + D ASE+L+ IR R+ ENLD ++
Sbjct: 127 EQL---TALPALRKRLKSAIDEDGRVT-DEASEELKNIRRNITRSEQSIRENLDGIIHGK 182
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
QA + L+T R R + ++ ++ + G+ + SSSG T F+EP VE N
Sbjct: 183 -----QARYLSDALVTMRNERYVIPVRQENRNVF-GGVVHDQSSSGQTLFIEPGQVVEMN 236
Query: 217 NMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
N RL +IAE ILS L+AE+ S +EI + + + D A+A FA+ +
Sbjct: 237 N---RLRQYQIAERDEIARILSELSAELVPSRKEIMHNAYVIGKFDFMNAKARFAKDLKA 293
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
V P++ +HV F + +HPLL + +
Sbjct: 294 VVPLVDEDNHVYFKQA------RHPLLDQTQV---------------------------- 319
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ DI + + + VVITGPNTGGKT ++KTLGL LM +AGL +PA ++
Sbjct: 320 -------IANDIMIGEDYQAVVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEDSQMG 372
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F+ + ADIGD QS+EQNLSTFS H++ IVD+L V + SLVL DE+G+GTDP EG ALA
Sbjct: 373 IFNEVFADIGDEQSIEQNLSTFSSHMTTIVDVLNQVDKNSLVLFDELGAGTDPQEGAALA 432
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL L + + TTHY +L + NA+ EF ++TL PTYR+L G G SN
Sbjct: 433 IAILDDLAAKQAYVMATTHYPELKVYGYNRPKTVNASMEFDVDTLSPTYRLLIGVPGRSN 492
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK--------LESQA 565
A I++ +G D+ +I A+++ + E Q +E+ L E RRK L +
Sbjct: 493 AFEISRRLGLDQTLIDSAKQI---MNGESQD--LNEMITDL-ENRRKMAETEYLELRNYV 546
Query: 566 RTAASLHAEIMDLYR 580
A LH ++ + Y+
Sbjct: 547 SKAKQLHEDLQEAYQ 561
>gi|384549903|ref|YP_005739155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302332752|gb|ADL22945.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 782
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|417891970|ref|ZP_12536027.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
gi|341851256|gb|EGS92185.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
Length = 782
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGTALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|228476275|ref|ZP_04060977.1| MutS2 protein [Staphylococcus hominis SK119]
gi|228269678|gb|EEK11180.1| MutS2 protein [Staphylococcus hominis SK119]
Length = 783
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 278/547 (50%), Gaps = 55/547 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K + + + +Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVIKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT +A ++ + +ID A+A +A+ + G P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HP+L N + V + + I
Sbjct: 297 TFYKERTVYLPNAY------HPIL-----------------------NKDTVVANTIEFI 327
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++RD L + TTHY +L NA+ EF + TL PTY++L G G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHAE 574
I+K +G II +A+ ++ E +S + + + E+R +LE R A + H +
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELEKLLREARTTHDD 555
Query: 575 IMDLYRE 581
+ Y++
Sbjct: 556 LERQYQQ 562
>gi|418280914|ref|ZP_12893736.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
gi|365167015|gb|EHM58492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
Length = 782
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PISKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|379020851|ref|YP_005297513.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
gi|359830160|gb|AEV78138.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
Length = 717
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 286/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V + +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 MEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDCLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|7387927|sp|Q9ZEH5.1|MUTS2_STAAU RecName: Full=MutS2 protein
gi|3776110|emb|CAA11403.1| MutS-like protein [Staphylococcus aureus]
Length = 719
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 2 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 59
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 60 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 117
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 118 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 172
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 173 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 231
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 232 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 258
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 259 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 310
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 311 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 370
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 371 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 430
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 431 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 485
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 486 EQVHDDLSKQYQQ 498
>gi|293500954|ref|ZP_06666805.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291095959|gb|EFE26220.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
Length = 780
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|299535519|ref|ZP_07048840.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|424739203|ref|ZP_18167624.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
gi|298728719|gb|EFI69273.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|422946841|gb|EKU41246.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
Length = 788
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 281/577 (48%), Gaps = 64/577 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q F K ++ LL + L++++ + + + I D+ A G +L+ E+ +
Sbjct: 38 QTDFAKVVQ----LLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAVELMEI 93
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
T+RA + + + E +L+ D + + + LT L+ +I CID +L
Sbjct: 94 SSTIRA-SRILRNFIE--DLEADEVIDIPHFISKKEAMPVLTGLQHEINNCIDDNG-AVL 149
Query: 129 DRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS+ L IR AE + L+SL++ A A + L+T R R + +K
Sbjct: 150 DSASQTLRSIRQSLRAEEGKVRSKLESLIRGSNA----AKMLSDTLVTIRNDRFVIPVKQ 205
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+++ GI + SSSG T F+EP V+ NN RL E AE IL L+A + +
Sbjct: 206 EYRHHY-GGIVHDQSSSGQTLFIEPDSVVQANNEIHRLKMKEQAEIERILLALSAMVQEV 264
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
++ L+ + +ID+ A+ + Q P ++ D I + +HPLL
Sbjct: 265 ASDLFNLVKVLGDIDVILAKGKYGQANKCTMPKMNQ------DGYIRLIRARHPLL---- 314
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P+ D +P DI+ + +VITGPNTGGK
Sbjct: 315 ------------PI-------------------DSAIPNDIEFGKDITAIVITGPNTGGK 343
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL +LM++AGL +PA + L F+ + ADIGD QS+EQ+LSTFS H+ IVD
Sbjct: 344 TVTLKTVGLCTLMAQAGLPVPALDGSELAVFEQLFADIGDEQSIEQSLSTFSSHMVNIVD 403
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL+ ESLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 404 ILQKFDHESLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRP 463
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF +ETL PTYR+L G G SNA I+ +G II RA+ R
Sbjct: 464 GVANASVEFDIETLSPTYRLLIGVPGRSNAFEISSRLGLPESIIDRAKGFTGTDR----- 518
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
H + SL E RR+ E A + +L E L +E
Sbjct: 519 HEVESMIASLEETRRQSEDDAERSHALLLESETLRKE 555
>gi|421730736|ref|ZP_16169862.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407074890|gb|EKE47877.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 785
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 264/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHGEELITLGNLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|258423813|ref|ZP_05686699.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|418888936|ref|ZP_13443072.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|257846045|gb|EEV70073.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|377754446|gb|EHT78355.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|218134832|ref|ZP_03463636.1| hypothetical protein BACPEC_02735 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990217|gb|EEC56228.1| MutS2 family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 812
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/490 (34%), Positives = 255/490 (52%), Gaps = 62/490 (12%)
Query: 89 DGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN 148
+ DSL +PL E L + +T L +I CI + I D AS++L+ IR + K +
Sbjct: 122 EADSL---TPLFESL---DPVTSLAAEIKRCILSEDEIS-DDASQNLKDIRRKIKAGQDK 174
Query: 149 ----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
L SLL + + + + +IT R R C+ +KA +K +P G+ + S++G+T
Sbjct: 175 IHTELTSLLNSASVRTY----LQDYVITTRNGRYCLPVKAEYKSNVP-GMVHDQSATGST 229
Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
+F+EP V+ NN LS E AE IL+ +++ A+ I + ++ +D AFA+
Sbjct: 230 FFIEPMSVVKLNNDLKELSLKEEAEIEVILARISSHCAEYADAILTDQESLVRLDFAFAK 289
Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
A +++ P+++ + INI+ +HPL+ +
Sbjct: 290 ASLSRFYKCSRPVMNENGY------INIKKGRHPLIEPHHV------------------- 324
Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
VPIDI + + +++ITGPNTGGKT S+KT+GL +LM ++GL +
Sbjct: 325 ----------------VPIDIWLGRDFDLLIITGPNTGGKTVSLKTVGLLTLMGQSGLNI 368
Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
PA ++ L F + ADIGD QS+EQ+LSTFS H++ V IL R +L+L DEIG+GT
Sbjct: 369 PAFDNSELAVFKKVYADIGDEQSIEQSLSTFSSHMTNTVKILRYADRNTLILFDEIGAGT 428
Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
DP+EG ALAT+IL L R + TTHY++L ENA EF +E+LRPTYR+
Sbjct: 429 DPTEGAALATAILANLHKRGIRTIATTHYSELKVYALSTPGVENACCEFDVESLRPTYRL 488
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 564
L G G SNA I+ +G II AQ R E Q + ++ L R LE +
Sbjct: 489 LIGVPGKSNAFAISSKLGLSDYIINDAQN-----RIETQDVKFEDVLTDLEGSRIALEEE 543
Query: 565 ARTAASLHAE 574
R A L E
Sbjct: 544 RREVAELKEE 553
>gi|293509911|ref|ZP_06668620.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
gi|291467361|gb|EFF09878.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVALKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|333896863|ref|YP_004470737.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112128|gb|AEF17065.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 786
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 204/367 (55%), Gaps = 42/367 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLIHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ LT ++ K EI M + E+D+ FA+A ++ D PIL+++ +V
Sbjct: 243 EVERILAELTEDVGKHVDEINENMVVLKELDVIFAKAKYSISTDSTKPILNTKGYV---- 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
N++ +HPL+ SK D VPI I +
Sbjct: 299 --NLKNARHPLI--------------------------------SK---DAVVPISIHLG 321
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VITGPNTGGKT ++KT+GL +LMS +GL +PA + +FD I DIGD QS+
Sbjct: 322 ESFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADEGSDVAFFDNIFVDIGDEQSI 381
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVTSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L K+ ENA+ EF +ETL+PTYR+ G G SNA I+K +G + +I
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDVI 501
Query: 529 QRAQKLV 535
A+ +
Sbjct: 502 DNAKSYI 508
>gi|435854741|ref|YP_007316060.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
gi|433671152|gb|AGB41967.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
Length = 788
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 285/592 (48%), Gaps = 87/592 (14%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E Q+ + + + L+ + P I DI L G +L E+ + T+ +
Sbjct: 43 IESRQQEVTEATKILSRESAPPF--GGIYDIRSALKKVEKGAILGADELLDILITITS-- 98
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL- 135
KKL D Y +L++ + LE+KI +D + I D AS L
Sbjct: 99 --GKKLRSYFLGLEDEDNEYVRILKISSQIETFSNLEQKIRKAVDNQGQI-KDSASSKLA 155
Query: 136 ---ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR R L+S+L Q + I + ++T R R + +KA+ + P
Sbjct: 156 DLRRKIRNTSDRIKNKLNSILNSNRYQSY----IQESVVTIRDQRYVIPVKAAKQSDFP- 210
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SG T F+EP VE NN +L + E E IL L+ E+ K + IK +
Sbjct: 211 GIIHDKSASGQTVFIEPMPVVEINNKLQQLRSEEEEEIKRILQELSIEVEKRLQPIKETI 270
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ +D FA+A ++ ++ PIL+S+ IN+ +HPLL
Sbjct: 271 KVLAVLDFIFAKAKYSIELEASEPILNSKGQ------INLIKARHPLLT----------- 313
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
DV VPID+++ +VITGPNTGGKT S+KT+G
Sbjct: 314 -------EDV------------------VPIDVQLGDNFASLVITGPNTGGKTVSLKTIG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L ++M +AGL++PA + +L F+ + ADIGD QS+EQNLSTFS H+++I+ I+E S
Sbjct: 349 LLTIMGQAGLHVPALSGSKLAIFNQVYADIGDEQSIEQNLSTFSSHMTQIIKIVERASIN 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP EG ALA IL YL + V TTHY++L ENA+ E
Sbjct: 409 SLVLLDELGAGTDPVEGSALARGILDYLHQQGAKTVATTHYSELKTYAYNQDGVENASVE 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ--------------KLVERL 538
F +ETL PTY + G G SNA IA +G +II +A K +E
Sbjct: 469 FDVETLAPTYNLQMGLPGRSNAFQIASRLGLSDEIIDKASQFLDQEDIELDNIIKQIEED 528
Query: 539 RPERQQHRKS---------ELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ E QQ ++S EL + + +KLE+Q E+ + YRE
Sbjct: 529 KREYQQKKESAQENKRQARELREEYEAKLKKLEAQK------EREMKEAYRE 574
>gi|57866654|ref|YP_188310.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis RP62A]
gi|242242444|ref|ZP_04796889.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|418612985|ref|ZP_13176006.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|418626824|ref|ZP_13189420.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|420175070|ref|ZP_14681515.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|420234319|ref|ZP_14738884.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
gi|81674957|sp|Q5HQ30.1|MUTS2_STAEQ RecName: Full=MutS2 protein
gi|57637312|gb|AAW54100.1| MutS2 family protein [Staphylococcus epidermidis RP62A]
gi|242234094|gb|EES36406.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|374817295|gb|EHR81480.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|374831368|gb|EHR95110.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|394244356|gb|EJD89701.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|394304373|gb|EJE47778.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|402299950|ref|ZP_10819509.1| Clostridial MutS2-related protein [Bacillus alcalophilus ATCC
27647]
gi|401724900|gb|EJS98225.1| Clostridial MutS2-related protein [Bacillus alcalophilus ATCC
27647]
Length = 633
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 259/510 (50%), Gaps = 53/510 (10%)
Query: 24 LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + + +I I+ G +L PSE+ ++ LR + K
Sbjct: 47 LNETTEARAILDAESHIPFMGVSNIENIVQKLEKGMILDPSELISISDFLRGCRKM-KSF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
A E L Y+ + L+N +EE+I CI + +AS++L+ IR +
Sbjct: 106 MLAKEFFAPVLSSYALSMSELQN------VEEEINHCIKNNR--VDAQASKELKRIRRQI 157
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
E ++ L K I + I+K+ R+ + IKAS+K + G + VSS G
Sbjct: 158 DLTEEKMNDRLHKFLNSSANKKYIQEFFISKKDGRLTIPIKASYKNQV-SGTIVEVSSKG 216
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP + N L E EE IL+ L+ I + E+K MD + + D+ F
Sbjct: 217 STVFLEPSTVAKLNGELASLKAEETMEEYQILATLSGMIIEKNHELKMNMDLISQYDMVF 276
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A F++ + G+ P ++ + I I G +HPLL G
Sbjct: 277 AKAKFSKVIQGIEPKVNEHGY------IKIVGGQHPLLTGKV------------------ 312
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VP+ ++ + R +VITGPN GGKT +KT+GL ++ +G
Sbjct: 313 ------------------VPLQFEIGEDYRSLVITGPNAGGKTIVLKTIGLLTMAVMSGF 354
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++ A + F+ I DIGD+QSLE LSTFS H+ + +I++ + +L+L DEIGS
Sbjct: 355 HIKADKETEVSIFENIFVDIGDNQSLENALSTFSSHMKNVSEIMKQANNHTLLLFDEIGS 414
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA SIL + V TTHY ++ ++ F NAA +F+ +TL P Y
Sbjct: 415 GTEPNEGAALAISILDEFYQMGCMTVATTHYGEIKRYSEQHDDFMNAAMQFNQQTLEPLY 474
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+++ G +G+SNAL I++ + + +++QRA+
Sbjct: 475 QLMIGKSGESNALWISRKMQINEQVLQRAK 504
>gi|169829506|ref|YP_001699664.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
gi|168993994|gb|ACA41534.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
Length = 788
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 275/565 (48%), Gaps = 60/565 (10%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + L++++ + + + I D+ A G +L+ E+ + T+RA + + +
Sbjct: 46 QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAIELMEISSTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +L+ D + + + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DLEADEVIEIPHFIAKKETMPVLTGLQHEINNCIDDNG-AVLDSASTTLRTIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + L+SL++ A + L+T R R + +K +++ GI
Sbjct: 162 SLRSEEAKVRSKLESLIRGSNASKM----LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG T F+EP V+ NN RL E AE IL L+A + ++ L+ +
Sbjct: 217 DQSSSGQTLFIEPDSIVQANNEIHRLKMKEQAEVERILLALSAMVQDVAPDLFNLVKVLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+ID+ A+ + Q P ++ D I + +HPLL
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLVRARHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P+ D VP DI+ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DIAVPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL +PA + +L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ ESLVL
Sbjct: 356 MAQAGLPVPALDGSQLAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SIL + R + TTHY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+ +G II+RA+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPESIIERAKGFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTAASLHAEIMDLYRE 581
RR+ E A + +L E L +E
Sbjct: 531 TRRQSEDDAERSHALLLESESLRKE 555
>gi|359490844|ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
Length = 791
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 314/607 (51%), Gaps = 87/607 (14%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVS-GQLLSP---SEICAV 68
++ +ES +LL++T+AAL + + +D STI+ + ++ SA+ + + P +E AV
Sbjct: 76 QTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAV--LVKSAIQHARRMLPVDGNEAMAV 133
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
L+ + L A + D D +R+ P+ E++ L + I +D + +
Sbjct: 134 VALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSLVKLIQQVVD-EDGSVK 192
Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L + +R ++ + +DSL++ + + ++ ++ R C+ A
Sbjct: 193 DSASSALKQSRDQVRTLERKLYQLMDSLVRN---NVNETSSLE---VSNVDGRWCIKSGA 246
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+ L G+ L+ S SG +EP A+ N+ + E +L LT ++
Sbjct: 247 NLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLKLTEKMQMD 303
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF--------- 286
+I+ L+D V+++D+ ARA + G CP L S+ +H+S
Sbjct: 304 LEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEASYP 363
Query: 287 ---DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF---- 339
+ ++++ HPLL+ +L A + DV SL+ +S
Sbjct: 364 IKREWTLHLPKAYHPLLVQQHRENLQKA-------RKDV--------SLAISVSYVLEQS 408
Query: 340 -PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
PVP+D + TRV+VITGPNTGGKT +KT+GLA++M+++GL++ A R+PWFD +
Sbjct: 409 PPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYV 468
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QSL Q+LSTFSGH+ +I DI + +SLVL+DE+G+GT+P EG AL S+L+
Sbjct: 469 FADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLE 528
Query: 459 YLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
+ L + TTH+++L LK + FENA EF L+PTY+ILWG G SNA+NI
Sbjct: 529 SFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINI 588
Query: 518 AKSIGFDRKIIQRAQKL--------------VERLRPERQQHRKS---------ELYQSL 554
A+ +G +K++ +A++ +ER + E Q+ +LY++L
Sbjct: 589 AERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENL 648
Query: 555 MEERRKL 561
+ +RKL
Sbjct: 649 LVTKRKL 655
>gi|310658450|ref|YP_003936171.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
gi|308825228|emb|CBH21266.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
Length = 793
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 245/475 (51%), Gaps = 53/475 (11%)
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIG 117
+L P ++ + TLR V L ++ +P+L+ L +N L +LE++I
Sbjct: 88 ILEPYQLLKISDTLRICRKVKNFLRDSEN---------TPILQQLSENITILKDLEDEID 138
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
I + I D AS +L +R E + L + + + + + ++T R+ R
Sbjct: 139 NAIISEEEI-SDNASPELSKVRRSITNTKEQIRQKLSSIVSSSQYSKYLQEAIVTMRQDR 197
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
V +KA ++ +P GI + SSSGAT F+EP VE NN E E IL++L
Sbjct: 198 FVVPVKAENRSNVP-GIVHDSSSSGATLFIEPMAVVEMNNKLREYKVKEQEEIERILTVL 256
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+A S EI+ + EID A+ + M P ++S D +N++ +H
Sbjct: 257 SAMAGLSYHEIRTNEQMIAEIDFIMAKGKLSVKMKAQEPFINS------DLVMNLKNARH 310
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PL+ D +N VP +I + E +VIT
Sbjct: 311 PLI--------------------DPKNV---------------VPSNINIGKEFDTLVIT 335
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KT+GL ++M+++GL+LP + FD I ADIGD QS+EQ+LSTFS
Sbjct: 336 GPNTGGKTVTLKTIGLFAIMAQSGLHLPTDYGTSICIFDNIFADIGDEQSIEQSLSTFSS 395
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ IV+IL+ V LVL DE+G+GTDP EG ALA SIL LR+ + V TTHY++L
Sbjct: 396 HMTHIVNILDEVKDNCLVLFDELGAGTDPLEGAALAVSILDRLREYKLITVATTHYSELK 455
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
R ENA+ EF ++TL PTYR+L G G SNA I++ +G +II A+
Sbjct: 456 HYALTTNRVENASVEFDVQTLSPTYRLLIGIPGKSNAFEISRKLGLKEEIILAAK 510
>gi|418655590|ref|ZP_13217441.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
gi|375036341|gb|EHS29416.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 288/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKYSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|148267636|ref|YP_001246579.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH9]
gi|150393691|ref|YP_001316366.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH1]
gi|229486378|sp|A6U0W1.1|MUTS2_STAA2 RecName: Full=MutS2 protein
gi|229486379|sp|A5IS30.1|MUTS2_STAA9 RecName: Full=MutS2 protein
gi|147740705|gb|ABQ49003.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946143|gb|ABR52079.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH1]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVTEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|258515602|ref|YP_003191824.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779307|gb|ACV63201.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 786
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 273/561 (48%), Gaps = 65/561 (11%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L++T+ A M + +P D+ DI + A G +L ++ + TL A L
Sbjct: 48 LSETTEAREMFRLEPAADIGGWHDIRKSVIRAHQGAVLEAKDLSEIGETLAAARLARNYL 107
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E E Y L + +LE ++ I I DRAS+ L IR
Sbjct: 108 LERDEF-------YPLLAGIGSRITSFADLEHRLKNAI-LPGGEIADRASDALSQIRRRI 159
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
N ++ L+ + + P++T R R V +K ++ + GI + S+SG
Sbjct: 160 TNNRASVKERLEHIIRSPNYQKYLQDPIVTIREGRYVVPVKLEYRGQV-QGIVHDTSASG 218
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
AT F+EP VE NN RL +E E IL+ L+ +A+ + ++ + +D
Sbjct: 219 ATLFVEPMAVVEANNELRRLIAAEKQEIVKILTDLSCRVAQESEPLGVTLEALGHLDFVL 278
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A + MD P+L +NI+ +HPLL G DV
Sbjct: 279 AKARLSSQMDAWAPVLVD------GPVVNIQKGRHPLLAG------------------DV 314
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VP+ + + E ++ITGPNTGGKT ++KT+GL LM+++GL
Sbjct: 315 ------------------VPVSVHLGKEFDSLIITGPNTGGKTVTLKTIGLLVLMAQSGL 356
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA++ F+ + ADIGD QS+EQ+LSTFS H+S IV IL SLVL+DE+G+
Sbjct: 357 HIPAESSSETGIFEQVFADIGDEQSIEQSLSTFSSHMSNIVSILNQSGAGSLVLMDELGA 416
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA +IL+ L ++ V TTHY++L R ENA+ EF +L+PTY
Sbjct: 417 GTDPTEGAALAQAILEKLHEQKAKIVATTHYSELKNFAYAHRRVENASVEFDPISLKPTY 476
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
R+L G G SNA IA +G + ++ RA+ + +Q SEL L +ER+ E
Sbjct: 477 RLLIGKPGRSNAFEIALRLGLEPGVVSRARDFL-----TTEQIEISELMLRLEKERQAAE 531
Query: 563 SQARTAASLHAEIMDLYREDS 583
+ R I +L R+D+
Sbjct: 532 EEKR--------IAELLRQDA 544
>gi|253317073|ref|ZP_04840286.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|257795126|ref|ZP_05644105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|258407166|ref|ZP_05680315.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|258421743|ref|ZP_05684664.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|258432913|ref|ZP_05688602.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|258443403|ref|ZP_05691746.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|258446076|ref|ZP_05694238.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|258449811|ref|ZP_05697909.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|258454910|ref|ZP_05702873.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|269202756|ref|YP_003282025.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282894171|ref|ZP_06302402.1| MutS2 protein [Staphylococcus aureus A8117]
gi|282928666|ref|ZP_06336263.1| MutS2 protein [Staphylococcus aureus A10102]
gi|295405948|ref|ZP_06815757.1| MutS2 protein [Staphylococcus aureus A8819]
gi|296275631|ref|ZP_06858138.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MR1]
gi|297246508|ref|ZP_06930346.1| MutS2 protein [Staphylococcus aureus A8796]
gi|384864370|ref|YP_005749729.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150285|ref|YP_005741849.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|415694454|ref|ZP_11455905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|417652169|ref|ZP_12301922.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417801420|ref|ZP_12448510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|417894614|ref|ZP_12538628.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|418424284|ref|ZP_12997408.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|418427274|ref|ZP_13000288.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|418430119|ref|ZP_13003036.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433078|ref|ZP_13005860.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|418436753|ref|ZP_13008557.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|418439625|ref|ZP_13011334.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|418442676|ref|ZP_13014279.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|418445736|ref|ZP_13017214.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|418448680|ref|ZP_13020074.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|418451504|ref|ZP_13022839.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|418454561|ref|ZP_13025824.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457435|ref|ZP_13028640.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|418568086|ref|ZP_13132440.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|418638918|ref|ZP_13201191.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|418653778|ref|ZP_13215707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|418663441|ref|ZP_13224959.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|418877992|ref|ZP_13432227.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880818|ref|ZP_13435037.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883745|ref|ZP_13437942.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886403|ref|ZP_13440552.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|418894761|ref|ZP_13448858.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|418914239|ref|ZP_13468211.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920218|ref|ZP_13474151.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931206|ref|ZP_13485048.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|418991004|ref|ZP_13538665.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|419785786|ref|ZP_14311533.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|424777696|ref|ZP_18204655.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|443635753|ref|ZP_21119875.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
gi|257789098|gb|EEV27438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|257841321|gb|EEV65766.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|257842076|gb|EEV66504.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|257849353|gb|EEV73330.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|257851493|gb|EEV75432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|257855134|gb|EEV78075.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|257856731|gb|EEV79634.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|257862790|gb|EEV85555.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|262075046|gb|ACY11019.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282589705|gb|EFB94791.1| MutS2 protein [Staphylococcus aureus A10102]
gi|282763657|gb|EFC03786.1| MutS2 protein [Staphylococcus aureus A8117]
gi|285816824|gb|ADC37311.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|294969383|gb|EFG45403.1| MutS2 protein [Staphylococcus aureus A8819]
gi|297176614|gb|EFH35877.1| MutS2 protein [Staphylococcus aureus A8796]
gi|312829537|emb|CBX34379.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128541|gb|EFT84546.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|329725189|gb|EGG61678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334276778|gb|EGL95028.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|341851798|gb|EGS92707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|371980768|gb|EHO97969.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|375017989|gb|EHS11584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|375019967|gb|EHS13510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|375034089|gb|EHS27264.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|377694114|gb|EHT18479.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|377695625|gb|EHT19985.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|377715039|gb|EHT39236.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|377715479|gb|EHT39669.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|377723126|gb|EHT47251.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|377726585|gb|EHT50696.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731711|gb|EHT55764.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|377757741|gb|EHT81629.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377765577|gb|EHT89426.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|383361993|gb|EID39352.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|387719184|gb|EIK07136.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719344|gb|EIK07293.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|387720694|gb|EIK08597.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|387725944|gb|EIK13535.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|387728283|gb|EIK15776.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|387730846|gb|EIK18199.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|387736228|gb|EIK23329.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|387737623|gb|EIK24685.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|387738356|gb|EIK25400.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|387745329|gb|EIK32088.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|387746022|gb|EIK32767.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|387747993|gb|EIK34692.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346376|gb|EJU81466.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|408423364|emb|CCJ10775.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408425354|emb|CCJ12741.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408427342|emb|CCJ14705.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408429329|emb|CCJ26494.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408431317|emb|CCJ18632.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408433311|emb|CCJ20596.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408435302|emb|CCJ22562.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408437287|emb|CCJ24530.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|443408812|gb|ELS67323.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|239636360|ref|ZP_04677362.1| MutS2 protein [Staphylococcus warneri L37603]
gi|239597715|gb|EEQ80210.1| MutS2 protein [Staphylococcus warneri L37603]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 284/548 (51%), Gaps = 58/548 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + +A ++ + G +L+ +E+ A++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLSKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ LT+L + I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT+++A E + L + ++ +D A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILAELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + V ++ HPLL +++ +N+ D+E
Sbjct: 295 PTFHKERTVYLPNAY------HPLLDHNTV------VANTIEFVDDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + + + E+R +L+ + A + H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQATHD 553
Query: 574 EIMDLYRE 581
E+ Y++
Sbjct: 554 ELAKQYQQ 561
>gi|418906080|ref|ZP_13460107.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377765380|gb|EHT89230.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 289/553 (52%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ S++ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSKLNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|167037192|ref|YP_001664770.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040669|ref|YP_001663654.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter sp. X514]
gi|300914710|ref|ZP_07132026.1| MutS2 family protein [Thermoanaerobacter sp. X561]
gi|307724056|ref|YP_003903807.1| MutS2 family protein [Thermoanaerobacter sp. X513]
gi|320115610|ref|YP_004185769.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166854909|gb|ABY93318.1| MutS2 family protein [Thermoanaerobacter sp. X514]
gi|166856026|gb|ABY94434.1| MutS2 family protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300889645|gb|EFK84791.1| MutS2 family protein [Thermoanaerobacter sp. X561]
gi|307581117|gb|ADN54516.1| MutS2 family protein [Thermoanaerobacter sp. X513]
gi|319928701|gb|ADV79386.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 791
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 292/572 (51%), Gaps = 60/572 (10%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKALDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + LE++I I +
Sbjct: 93 LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKALRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V E+D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFNDIEIVSELDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVVV------------PIDIHIGKQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEEKSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKIPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF +ETL+PTY+++ G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFDVETLKPTYKLIISLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEI 575
++ + +RR+LE A L ++
Sbjct: 521 -----DIIADVESKRRELEKANHEIAFLKKDV 547
>gi|418563215|ref|ZP_13127657.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
gi|371971759|gb|EHO89155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
Length = 782
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDCLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|345861074|ref|ZP_08813351.1| mutS2 family protein [Desulfosporosinus sp. OT]
gi|344325837|gb|EGW37338.1| mutS2 family protein [Desulfosporosinus sp. OT]
Length = 787
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 177/559 (31%), Positives = 278/559 (49%), Gaps = 70/559 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
IPF E + L +T +++ PL + ++I + + G ++ E+ +R
Sbjct: 37 IPF-IDWESVRLALQETEEGKNLLRGNPLFSVRGAKEIRPYIERCLRGGVIHGEELLEIR 95
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLII 127
TLR + L E E + L E++ +LE++I CI D K +
Sbjct: 96 DTLRVGRKIKLLLLELNE-------GFPGLWEIVLPIEPQKDLEDEISRCIAEDGK---V 145
Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS +L +R + R E+L++ L+ A Q + P+IT+R R + IK
Sbjct: 146 ADSASPELADLRRALNRLQNRIRESLEATLRNSAYQKM----LQDPIITQRSDRYVLPIK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ P GI + S+SGAT F+EP V N + E E IL +L+++I
Sbjct: 202 QEYRTAFP-GIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVMRILQMLSSQIEA 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ L + + ++DL A+A + M+ P L + + +HPL+LG
Sbjct: 261 RVDAVAELHEALAKLDLVVAKAQLSVAMNAGAPELVKGQQMKLVQA------RHPLILGK 314
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
VP+ +++ + +V+TGPNTGG
Sbjct: 315 V------------------------------------VPLSLELGIDFDTLVVTGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K +GL + M+++GL++PA+N R+ F I ADIGD QS+EQ+LSTFSGH+ IV
Sbjct: 339 KTVALKVVGLMAAMTQSGLHIPAENDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIV 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+I++ SLVL+DE+G+GTDP+EG ALA IL L +R V TTHY L +
Sbjct: 399 EIIDRSDERSLVLLDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYET 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
R +NA+ EF ETLRPTYR+L G G SNA IA +G +++++A V ER+
Sbjct: 459 PRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEQVLEKANTFV----TERE 514
Query: 544 QHRKSELYQSLMEERRKLE 562
++L ++L E R++E
Sbjct: 515 MQ-VADLIENLGETHREIE 532
>gi|418637528|ref|ZP_13199847.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
gi|374838774|gb|EHS02309.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
Length = 783
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 257/500 (51%), Gaps = 55/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +L+ A G +L+ +E+ ++R ++ V N +K L+ D Q Y PLL
Sbjct: 65 LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ + LT+L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + ++T R R + +KA ++ GI + S+SG T ++EP VE
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN RL N E E IL++LT +A+ + + + +D A+A +A + G
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + ++ HPLL ++ +N+ DVE
Sbjct: 296 PTFYEARTIYLPNAF------HPLLDKETV------VANTIEFADDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G + II +A+ ++
Sbjct: 495 DISKKLGLNLSIINKAKTMI 514
>gi|366166669|ref|ZP_09466424.1| MutS2 family protein [Acetivibrio cellulolyticus CD2]
Length = 793
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 251/493 (50%), Gaps = 49/493 (9%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L + DI + A G +L+P E+ V LRAV N L A D + +
Sbjct: 65 LGGVNDIRDSIRRAEIGSILNPGELIRVSGLLRAVRN----LKNYASGDNIRTGEDNVVG 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL-DSLLKKVAAQ 159
EL+ +E+KI CI + I D AS L IR + + ++ D L V +
Sbjct: 121 ELINCLEASKRVEDKINMCIVSEEEI-SDNASPALGNIRRQIRHAQNSIKDKLNDLVRSS 179
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+Q + + ++T R R V +K ++ +P G+ + S+SGAT F+EP VE NN
Sbjct: 180 KYQKY-MQESIVTLRGDRYVVPVKQEYRSEIP-GLVHDSSASGATLFVEPMAVVEANNTI 237
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L E E IL L+ ++++ +K ++ + ++D FA+A + + VCP L+
Sbjct: 238 RELKIKEQTEIERILQELSCDVSEISMGLKTNVELLAKLDFIFAKAKLSLDYNCVCPKLN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ +HPLL +P
Sbjct: 298 REGRTVIKKG------RHPLL---------------DP--------------------KI 316
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VPID + E +V+TGPNTGGKT ++KT+GL +LM++AGL +PA + F +
Sbjct: 317 VVPIDFWIGDEFDTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLQIPANEGTEISVFGKVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV+ILE V SLVL DE+G+GTDP+EG ALA +IL++
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMKNIVNILENVDSSSLVLFDELGAGTDPTEGAALAMAILEH 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
L++R V TTHY+ L ENA EF +ETL+PTY++L G G SNA I+
Sbjct: 437 LKERGCTIVATTHYSQLKVYAVTTPHVENACCEFDVETLKPTYKLLIGVPGRSNAFAISN 496
Query: 520 SIGFDRKIIQRAQ 532
+G I++RA+
Sbjct: 497 RLGLIDSIVERAK 509
>gi|82750751|ref|YP_416492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus RF122]
gi|123549011|sp|Q2YXD1.1|MUTS2_STAAB RecName: Full=MutS2 protein
gi|82656282|emb|CAI80696.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
Length = 782
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + + V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEHVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSCNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|315658547|ref|ZP_07911419.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
gi|315496876|gb|EFU85199.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
Length = 783
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 257/500 (51%), Gaps = 55/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +L+ A G +L+ +E+ ++R ++ V N +K L+ D Q Y PLL
Sbjct: 65 LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ + LT+L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + ++T R R + +KA ++ GI + S+SG T ++EP VE
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN RL N E E IL++LT +A+ + + + +D A+A +A + G
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + ++ HPLL ++ +N+ DVE
Sbjct: 296 PTFYEARTIYLPNAF------HPLLDKETV------VANTIEFADDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G + II +A+ ++
Sbjct: 495 DISKKLGLNLSIINKAKTMI 514
>gi|289551051|ref|YP_003471955.1| recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|385784672|ref|YP_005760845.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|418414347|ref|ZP_12987562.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180583|gb|ADC87828.1| Recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|339894928|emb|CCB54231.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|410876954|gb|EKS24851.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 783
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 257/500 (51%), Gaps = 55/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +L+ A G +L+ +E+ ++R ++ V N +K L+ D Q Y PLL
Sbjct: 65 LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ + LT+L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + ++T R R + +KA ++ GI + S+SG T ++EP VE
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN RL N E E IL++LT +A+ + + + +D A+A +A + G
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + ++ HPLL ++ +N+ DVE
Sbjct: 296 PTFYEARTIYLPNAF------HPLLDKETV------VANTIEFADDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G + II +A+ ++
Sbjct: 495 DISKKLGLNLSIINKAKTMI 514
>gi|429728985|ref|ZP_19263676.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
gi|429146586|gb|EKX89637.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
Length = 809
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/587 (30%), Positives = 299/587 (50%), Gaps = 62/587 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
+G +++K PF K + + L T A +++ + + I +I + A G +L
Sbjct: 29 LGRNIIKKLN-PFSKYDQVKEALEETTEAQSILIKRGHVSMQGIHNIEDMAKRADIGGVL 87
Query: 61 SPSEICAVRRTLRAVNNVWKKLT-----------EAAELDGDSLQRYSPLLELLKNCNFL 109
+ + V T+RA + L+ E + D + + RY P+++ + ++
Sbjct: 88 DNASLIKVADTMRATRILSNLLSGDIKVETFGNAENSNKDKEEVTRY-PIIQTMAQSLYV 146
Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
++E+ I I + + D AS +L +IR + +N+ S L + + +
Sbjct: 147 HRDVEDAIYNAIVSDIEV-SDNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQD 205
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+I+ R R + +KA ++ ++ GI + S SGAT F+EP VE NN +L E
Sbjct: 206 AIISMRGDRFVIPVKAEYRSVIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETE 264
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + + RE+ + + +D AFA+ + M V PIL+ D
Sbjct: 265 EIERILAELSGMVGEVARELISNQEILGRLDFAFAKGKLSIAMKAVDPILNR------DK 318
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
S I +HPL+ K+ V N+ + +G DF
Sbjct: 319 SFRIVKGRHPLI----------------DKKTVVANT-VYLGK------DFSS------- 348
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
++ITGPNTGGKT ++K +GL SLM++ GL++PA + FD + ADIGD+QS+
Sbjct: 349 -----LLITGPNTGGKTVTIKMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSI 403
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ IV+I++ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R L +
Sbjct: 404 EQNLSTFSSHMTSIVNIVDRVTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCI 463
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENAA EF +ETL PTYR+L G G SNA I++ +G + +I
Sbjct: 464 ATTHYSELKKYALAKKGVENAAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVI 523
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
A+ ++ E + ++ QS+ + R K+E + A ++ +EI
Sbjct: 524 LNAKFYMDNDDIELE-----DVLQSVEKNRLKIEEELSRAEAMRSEI 565
>gi|418634564|ref|ZP_13196957.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
gi|374836787|gb|EHS00364.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
Length = 782
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSSLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|302144008|emb|CBI23113.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 317/621 (51%), Gaps = 88/621 (14%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVS-GQLLSP---SEICAV 68
++ +ES +LL++T+AAL + + +D STI+ + ++ SA+ + + P +E AV
Sbjct: 65 QTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAV--LVKSAIQHARRMLPVDGNEAMAV 122
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
L+ + L A + D D +R+ P+ E++ L + I +D + +
Sbjct: 123 VALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSLVKLIQQVVD-EDGSVK 181
Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQI--FQAGGIDKPLITKRRSRMCVGI 182
D AS L + +R ++ + +DSL++ + + +D R C+
Sbjct: 182 DSASSALKQSRDQVRTLERKLYQLMDSLVRNNVNETSSLEVSNVD--------GRWCIKS 233
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
A+ L G+ L+ S SG +EP A+ N+ + E +L LT ++
Sbjct: 234 GANLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLKLTEKMQ 290
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF------- 286
+I+ L+D V+++D+ ARA + G CP L S+ +H+S
Sbjct: 291 MDLEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEAS 350
Query: 287 -----DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV-------------ENSEMT 328
+ ++++ HPLL+ +L A + + S+ E +++
Sbjct: 351 YPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGEKFNVKEETDIN 410
Query: 329 VGSLSKGISDF----PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
+ SL ++ PVP+D + TRV+VITGPNTGGKT +KT+GLA++M+++GL++
Sbjct: 411 LSSLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHV 470
Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
A R+PWFD + ADIGD QSL Q+LSTFSGH+ +I DI + +SLVL+DE+G+GT
Sbjct: 471 LAAEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGT 530
Query: 445 DPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
+P EG AL S+L+ + L + TTH+++L LK + FENA EF L+PTY+
Sbjct: 531 NPLEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYK 590
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQHRKS- 548
ILWG G SNA+NIA+ +G +K++ +A++ +ER + E Q+
Sbjct: 591 ILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDA 650
Query: 549 --------ELYQSLMEERRKL 561
+LY++L+ +RKL
Sbjct: 651 RYYLMLSRDLYENLLVTKRKL 671
>gi|402570749|ref|YP_006620092.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
gi|402251946|gb|AFQ42221.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
Length = 787
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 280/561 (49%), Gaps = 69/561 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE + L QT +++ PL + ++I + + G ++ E+ +R TLRA
Sbjct: 42 LESVRLALQQTEEGKNLLRGNPLFSVRGAKEIRPYIERCLRGGVIHGEELLEIRDTLRAG 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
+ + L D +++ L ++ LE++I CI D K + D A+
Sbjct: 102 RKIKQLLQ-------DLREQFPGLWDITLPIEPQKPLEDEITRCISEDGK---VADNATP 151
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+L R + R E+L++ L+ + Q + P+IT+R R + +K ++
Sbjct: 152 ELADFRRAINRLQNRIRESLEATLRNPSYQKI----LQDPIITQRSDRYVIPVKQEYRAS 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
P GI + S+SGAT F+EP V N + E E IL +L+A+I EI
Sbjct: 208 FP-GIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEGRGDEIA 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
L + + ++DL A+A + M+ P L + + + +HPL+ G
Sbjct: 267 DLHEALAQLDLVIAKAHLSVSMNAGAPELVAGQQIKLVQA------RHPLISGRV----- 315
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP+ +++ E +VITGPNTGGKT ++K
Sbjct: 316 -------------------------------VPLSLELGIEFDTLVITGPNTGGKTVALK 344
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
+GL + M+++GL +PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I++
Sbjct: 345 VVGLMAAMNQSGLQIPAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRS 404
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL+DE+G+GTDP+EG ALA IL L +R V TTHY L + R +NA
Sbjct: 405 DGRSLVLLDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYETPRVKNA 464
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETLRPTYR+L G G SNA IA +G +++++A V ER+ ++
Sbjct: 465 SVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEEVLEKANTFV----TEREMQ-VAD 519
Query: 550 LYQSLMEERRKLESQARTAAS 570
L ++L E R++E + + A +
Sbjct: 520 LIENLGETHREIEIEKQKAET 540
>gi|15924134|ref|NP_371668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926728|ref|NP_374261.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus N315]
gi|156979466|ref|YP_001441725.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005930|ref|ZP_05144531.2| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|54037877|sp|P65496.1|MUTS2_STAAN RecName: Full=MutS2 protein
gi|54041518|sp|P65495.1|MUTS2_STAAM RecName: Full=MutS2 protein
gi|229486377|sp|A7X169.1|MUTS2_STAA1 RecName: Full=MutS2 protein
gi|13700944|dbj|BAB42240.1| MutS-like protein [Staphylococcus aureus subsp. aureus N315]
gi|14246914|dbj|BAB57306.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156721601|dbj|BAF78018.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 782
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ +L+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERVLTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|420155006|ref|ZP_14661877.1| MutS2 family protein [Clostridium sp. MSTE9]
gi|394759848|gb|EJF42511.1| MutS2 family protein [Clostridium sp. MSTE9]
Length = 802
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 293/566 (51%), Gaps = 68/566 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSE---ICAVRR 70
S +E ++ L +T A +M P S ++++A L A +G +L+ + I V R
Sbjct: 52 STDEVRRRLQETDDAFVLMAKFGSP-SFSGLKNVANPLRRAQAGGVLNLVDFLRIAGVLR 110
Query: 71 TLRAVNNVWKKLTEAAELDGD-SLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
T+RA+++ W++ +E + D + P L + N + EE++ +L I
Sbjct: 111 TMRAISD-WRRKSEGMKTTLDWRFESVVPNKYLEEKINAVVISEEEVADNASPELASIRR 169
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
R +R E LD +++ A Q + + P++T R R V +KA +
Sbjct: 170 RIRAASSRVR-------EQLDKMIRSAAYQKY----LQDPIVTMRGGRYVVPVKAECRGE 218
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SSSGAT F+EP G VE NN E+R L + E AE IL+ L+AE I
Sbjct: 219 IP-GLVHDTSSSGATVFVEPMGVVEANN-EIRVLQSRESAEIERILAELSAEAGGFADLI 276
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +DL FA+ A M P ++ + + + +HPL+
Sbjct: 277 IESYHAAVGLDLIFAKGQLAYKMKASMPKVNDTGRILLNQA------RHPLI-------- 322
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P + VP++I++ +VITGPNTGGKT ++
Sbjct: 323 -------DPKQV--------------------VPMNIELGTTFDTLVITGPNTGGKTVTL 355
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL +LM+ GL LP ++ + F +LADIGD QS+EQ+LSTFS H++ I+ I+E
Sbjct: 356 KTLGLLTLMAMCGLMLPVGDNSEISVFHQVLADIGDEQSIEQSLSTFSAHMTNIIQIIEQ 415
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL+L+DE+G+GTDP EG ALA +IL+ LR+R TTHYA+L + EN
Sbjct: 416 ADERSLILLDELGAGTDPVEGAALAMAILEALRERHARVAATTHYAELKAYALQTAGVEN 475
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
+ EF + TLRPTYR+L G G SNA I+ +G +++I+ RA++LV + R
Sbjct: 476 GSCEFDVATLRPTYRLLIGVPGRSNAFAISSRLGLNQEIVDRARELV-----SGEDRRFE 530
Query: 549 ELYQSLMEERRKLESQARTAASLHAE 574
++ Q+L + R+KLE++ R A +AE
Sbjct: 531 DVVQNLEQSRQKLEAERRQAQEQNAE 556
>gi|375363272|ref|YP_005131311.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371569266|emb|CCF06116.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 785
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 265/522 (50%), Gaps = 58/522 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ + P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAIKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|294501473|ref|YP_003565173.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
gi|294351410|gb|ADE71739.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
Length = 787
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 270/526 (51%), Gaps = 70/526 (13%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + + PL I D+ + A G LS +E+ V T+ A V K
Sbjct: 47 QEATDEATTVLRLRGNVPL--GGIFDVRSSVKRAEIGGTLSSNELLDVASTIYAARQV-K 103
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E D D LQ P++ E ++ L E+E+ I ID +LD AS+ L IR
Sbjct: 104 QFIEQVVEDED-LQL--PIITEHIEKLMPLPEVEQTIKMSIDENG-TVLDGASDQLRGIR 159
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ + R E L+SL++ +AQ + I +T R R + +K ++ GI
Sbjct: 160 QKLRSTESRIREKLESLIRSSSAQKMLSDAI----VTIRNERFVIPVKQEYRSAY-GGIV 214
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI------LSLLTAEIAKSEREIK 249
+ SSSGAT F+EP+ V NN L +++ E+ I L++ AE+A R+
Sbjct: 215 HDQSSSGATLFIEPQAIVTLNN---ELQEAKVKEKQEIERILIALTVQVAEVANELRQNV 271
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
YL+ E+D FA+ ++ + P ++ + ++ + KHPL+
Sbjct: 272 YLLG---ELDFMFAKGRYSHELKASKPKMNDRGYIKLVKA------KHPLIA-------- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+ DV V DI++ + +VITGPNTGGKT ++K
Sbjct: 315 ---------QEDV------------------VANDIELGDQYTSIVITGPNTGGKTVTLK 347
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 348 TLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDILQKV 407
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L NA
Sbjct: 408 DHESLVLFDELGAGTDPQEGAALAISILDQVYERGARVVATTHYPELKAYGYNREGVVNA 467
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ EF +ETL PTY++L G G SNA I+K +G ++I+RA+ +
Sbjct: 468 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSAEVIERAKGYI 513
>gi|420198949|ref|ZP_14704633.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
gi|394272635|gb|EJE17085.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
Length = 782
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|347727052|gb|AEP19884.1| recombination inhibitory protein [Exiguobacterium sp. 11-28]
Length = 784
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 294/603 (48%), Gaps = 84/603 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
L L + D+ + A G +LS SE+ AV + R V N ++KL E D + L R
Sbjct: 62 LPLGGLTDVRSEVKRAAIGSVLSTSELLAVAAVMYSGRQVKNFFEKLHE----DNEDL-R 116
Query: 96 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
L E + L E+E+ I ID + + D AS+ L +R + R+ E +D
Sbjct: 117 IPRLDEYAERLTKLIEVEQSIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRID 174
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEPQ 227
Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
V NN EVRL E AE ILS L+ + + +D + +D FA+ +
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVADSVVINLDVLATLDFVFAKVAYG 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
+ P L+ + + + +HP + P
Sbjct: 286 HQLKATEPKLNDEREIKLKQA------RHPFI----------------P----------- 312
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D VPI +++ +VITGPNTGGKT ++KTLGL LM ++GLY+PA+
Sbjct: 313 --------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAEF 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
L FD I ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484
Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
G SNA I++ +G ++I +A + ++ L E +HR +L + L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINEL--EAAKHRAEQLEKELIVK 542
Query: 558 RRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSKVDFDAIPNIDQCKD 617
R LE++ A+ A++ D RE T + R + AV + + + I + + ++
Sbjct: 543 RHDLEAE---QAAFEAKLTDFERERDTMYGEAEARAEKAVEQAKRQAN-EVIDRLKKLRE 598
Query: 618 KGI 620
+GI
Sbjct: 599 EGI 601
>gi|416124432|ref|ZP_11595428.1| mutS2 protein [Staphylococcus epidermidis FRI909]
gi|319401542|gb|EFV89752.1| mutS2 protein [Staphylococcus epidermidis FRI909]
Length = 782
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|18310863|ref|NP_562797.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens str. 13]
gi|38604940|sp|Q8XJ80.1|MUTS2_CLOPE RecName: Full=MutS2 protein
gi|18145545|dbj|BAB81587.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 786
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 242/450 (53%), Gaps = 57/450 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNTQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+ + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSVLVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLH 572
+L QSL E+ K E+ AR AA L
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILR 541
>gi|257870172|ref|ZP_05649825.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
gi|257804336|gb|EEV33158.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
Length = 787
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 257/500 (51%), Gaps = 62/500 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
IE+I + G L+ E+ V R L N + + + + DS + L E
Sbjct: 68 IENIRPQMKRIEIGADLNGLELAQVGRVLVTANELKRFFEDLS----DSEIEFERLYEWE 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
K L L ++ +D + D AS +L +IR +R+ E LDSL++ A+
Sbjct: 124 KQLVTLPTLSRRLKEAVDEDGRLT-DEASPELRVIRQNIRRSERTIRETLDSLVRGGNAK 182
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ ++T R R + +K ++ + G+ + SSSG T F+EPK V+ NN
Sbjct: 183 Y-----LSDTIVTMRNERYVIPVKQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN-- 234
Query: 220 VRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
RL +IAE T I L+ L+AE+A +REI + + +D A+A F + + + P
Sbjct: 235 -RLRQHQIAERTEIERILAELSAELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+++ +HV F + +HPL+ D E
Sbjct: 294 AINTDNHVVFKQA------RHPLI--------------------DQEKV----------- 316
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP DI + + + VVITGPNTGGKT ++KTLGL +M ++GL + ++ F
Sbjct: 317 ----VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQ 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H++ IVD+L+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 373 EIFADIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L R + TTHY +L NA+ EF ++TL PTYR+L G G SNA
Sbjct: 433 LDELGARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 492
Query: 517 IAKSIGFDRKIIQRAQKLVE 536
I+K +G D +II++A+++++
Sbjct: 493 ISKRLGLDTQIIEQAKQIMD 512
>gi|420177446|ref|ZP_14683782.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|420180254|ref|ZP_14686509.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
gi|394247830|gb|EJD93072.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|394251293|gb|EJD96392.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
Length = 782
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|383754385|ref|YP_005433288.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381366437|dbj|BAL83265.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 792
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 266/516 (51%), Gaps = 60/516 (11%)
Query: 26 QTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
QT+ A+ ++ L I DI +L A G +L E+ + T+ A+ + K
Sbjct: 49 QTTEAVKVLSMSAPPLGGIRDIRLLLKKAGKGAILELEELQNIMSTMYAMRTI-KYFFRD 107
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 143
E++ LQ ++ LE+L +LE + ID + D AS +L IR E K
Sbjct: 108 LEMESPILQEWARSLEIL------GQLERNLNNVIDEHGNMRED-ASVELRRIRRELKSS 160
Query: 144 --RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
R + ++++L A Q +FQ ++T R R + +KA ++ P G+ + S+
Sbjct: 161 QTRIKDKINAILHDGAYQKMFQ-----DAIVTVRDERYVIPVKAEYRAHFP-GLIHDQSA 214
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG+T F+EP VE NN +L+ +E E IL L+ EI + + + + + +ID
Sbjct: 215 SGSTLFIEPMAVVELNNDVKQLTLAEQQEIQRILRQLSGEIQREKETLSANCEILGDIDF 274
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
FA+A A M V P+L+ + ++ +HPL+
Sbjct: 275 TFAKARLANAMKAVRPLLNEEGRTVLSNA------RHPLI-------------------- 308
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
D VP I + + R+++ITGPNTGGKT +MKTLGL LM++A
Sbjct: 309 ---------------AVDKVVPTTISIGQDYRMLLITGPNTGGKTVTMKTLGLLVLMAQA 353
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GLYLP + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V + L+L+DE+
Sbjct: 354 GLYLPVDQGSEIALYANIYADIGDEQSIEQSLSTFSAHMTHIVSILDKVESDDLLLLDEL 413
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA SIL+ L + + TTHY++L ENA EF +ETLRP
Sbjct: 414 GAGTDPEEGAALAMSILEKLLEVQATTIATTHYSELKTFAYTREGIENACVEFDIETLRP 473
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
TYR+L G G SNA I+K +G +I RAQ+LV+
Sbjct: 474 TYRLLIGIPGASNAFAISKRLGLADSLILRAQQLVK 509
>gi|374578851|ref|ZP_09651945.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
gi|374414933|gb|EHQ87368.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
Length = 788
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 276/554 (49%), Gaps = 69/554 (12%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T A +++ PL + ++I + + G ++ E+ +R TLR + L
Sbjct: 49 LQKTEEAKNLLRGNPLFSVRGSKEIRSYIERCLRGGVIQGEELLEIRDTLRVGRKTKQLL 108
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRA 140
E+ E + L +++ LE++I CI D K + D AS +L A
Sbjct: 109 LESRE-------EFPGLWDIVFPIEPQKVLEDEITRCISEDGK---VADNASPEL----A 154
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ +R++ L + +++ + G K P+IT+R R + IK ++ P GI
Sbjct: 155 DLRRSINRLQNRIRESLEGTLRNSGYQKMLQDPIITQRSDRYVIPIKQEYRTSFP-GIVH 213
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP V N + E E IL +L+A+I EI L + +
Sbjct: 214 DQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEARADEIADLHEALA 273
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++DL A+A + M+ P L + + + +HPL+ G
Sbjct: 274 QLDLVVAKAHLSVTMNAGTPELVAGQQMKLVQA------RHPLISGGV------------ 315
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP+ +++ + +VITGPNTGGKT ++K +GL +
Sbjct: 316 ------------------------VPLSLELGIDFDTLVITGPNTGGKTVALKVVGLMAA 351
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL +PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I+ SLVL
Sbjct: 352 MNQSGLQIPAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIINRADGRSLVL 411
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA IL L +R V TTHY L + R +NA+ EF E
Sbjct: 412 LDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYETPRVKNASVEFDTE 471
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA IA +G +++++A V ER+ ++L ++L E
Sbjct: 472 TLRPTYRLLIGIPGKSNAFTIAGRLGLSERVLEKANTFV----TEREMQ-VADLIENLGE 526
Query: 557 ERRKLESQARTAAS 570
R++E + A +
Sbjct: 527 THREIELEKEKAET 540
>gi|357050429|ref|ZP_09111627.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
gi|355381082|gb|EHG28209.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
Length = 787
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 257/500 (51%), Gaps = 62/500 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
IE+I + G L+ E+ V R L N + + + + DS + L E
Sbjct: 68 IENIRPQMKRIEIGADLNGLELAQVGRVLVTANELKRFFEDLS----DSEIEFERLYEWE 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
K L L ++ +D + D AS +L +IR +R+ E LDSL++ A+
Sbjct: 124 KQLVTLPTLSRRLKEAVDEDGRLT-DEASPELRVIRQNIRRSERTIRETLDSLVRGGNAK 182
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ ++T R R + +K ++ + G+ + SSSG T F+EPK V+ NN
Sbjct: 183 Y-----LSDTIVTMRNERYVIPVKQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN-- 234
Query: 220 VRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
RL +IAE T I L+ L+AE+A +REI + + +D A+A F + + + P
Sbjct: 235 -RLRQHQIAERTEIERILAELSAELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+++ +HV F + +HPL+ D E
Sbjct: 294 AINTDNHVVFKQA------RHPLI--------------------DQEKV----------- 316
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP DI + + + VVITGPNTGGKT ++KTLGL +M ++GL + ++ F
Sbjct: 317 ----VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQ 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H++ IVD+L+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 373 EIFADIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L R + TTHY +L NA+ EF ++TL PTYR+L G G SNA
Sbjct: 433 LDELGARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 492
Query: 517 IAKSIGFDRKIIQRAQKLVE 536
I+K +G D +II++A+++++
Sbjct: 493 ISKRLGLDTQIIEQAKQIMD 512
>gi|317473450|ref|ZP_07932744.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899100|gb|EFV21120.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 799
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 251/512 (49%), Gaps = 59/512 (11%)
Query: 26 QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
QT AL + Q + ++D+ L LS E+ + L AV N +
Sbjct: 49 QTQDALTRLYKQGSISFFGVQDLGASLKRLKMKGTLSAGELLEIAGLLEAVKNALAYGAQ 108
Query: 85 AAEL-DGDSL----QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
++ D DSL + P+ LLK+ I CI I D AS L+ IR
Sbjct: 109 RDDMADADSLDSVFESLVPMDGLLKD----------IRHCI-ISPEEISDDASSALKDIR 157
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
K + + S L + + + L+T R R C+ +K ++ G+ + S
Sbjct: 158 RNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEYRGQFK-GMIHDQS 216
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG+T F+EP V NN L E E IL+LL+ + + + ++++D
Sbjct: 217 SSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILALLSEQASYDMDSLAQNQKLLVQLD 276
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FA+A +A+ +G PI D INI+ +HPLL +P K
Sbjct: 277 FIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL---------------DPKK 315
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPI++ + ++VITGPNTGGKT S+KT+GL +LM +
Sbjct: 316 V--------------------VPINVSLGDAFSMLVITGPNTGGKTVSLKTVGLFTLMGQ 355
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
AGL++PA L ++ + ADIGD QS+EQNLSTFS H++ IV I++ R+SLVL+DE
Sbjct: 356 AGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSIIQNAHRDSLVLLDE 415
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+ GTDP EG ALA SIL L DR + TTHY++L ENA+ EF +ETL
Sbjct: 416 LCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTNGVENASCEFDVETLS 475
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
PTYR++ G G SNA I++ +G D II+ A
Sbjct: 476 PTYRLMIGIPGKSNAFAISRKLGLDNHIIEHA 507
>gi|317056492|ref|YP_004104959.1| MutS2 family protein [Ruminococcus albus 7]
gi|315448761|gb|ADU22325.1| MutS2 family protein [Ruminococcus albus 7]
Length = 802
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 270/517 (52%), Gaps = 63/517 (12%)
Query: 26 QTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T++AL M +++ +I +++ LN A +G LS E+ +++ L N + + +
Sbjct: 51 KTASALNMSIKNGTPAFYSINNVSASLNRAKAGGTLSLGELLEIKKVLGQTNELCRWFDQ 110
Query: 85 AAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
+ D S L E L N + LE I +D + L D AS +L IR +
Sbjct: 111 ----NEDKNTPLSYLFEQLFPNKSLWQRLETAI---LDSENL--SDDASPELRSIRNKIA 161
Query: 144 RN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+ E LD ++K + Q + + + ++T R R V +K K + G+ S
Sbjct: 162 KAGLKIRETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHGTS 216
Query: 200 SSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
++G+T F+EP VE NN EVR L E E IL+ + E A + +I+ D +++
Sbjct: 217 ATGSTLFIEPISVVEANN-EVRILQGKEQDEIHRILTDFSKECAMMQPQIESSYDAAVKL 275
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
DL FA+A A M V P +S D I + +HPL+ + N +
Sbjct: 276 DLYFAKANLAAKMRAVDP------EISDDGIIVLNKARHPLI-------------DENKV 316
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VPI+ + + V+VITGPNTGGKT ++KT+GL +LM+
Sbjct: 317 ----------------------VPINFRSGTDYNVLVITGPNTGGKTVTLKTVGLLTLMT 354
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
GL +PA + ++ + ILADIGD QS++Q+LSTFS H+ ++ DI++ ESLVLID
Sbjct: 355 MCGLMIPASDGCKISVYKNILADIGDRQSIQQSLSTFSSHMGKVKDIIDKADHESLVLID 414
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+GSGTDP EG ALA SI++ LR V TTHY ++ ENA+ EF ++T+
Sbjct: 415 ELGSGTDPVEGAALAVSIIERLRQVGATVVTTTHYQEIKMYALDTDGVENASCEFDVDTM 474
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
RPTY+++ GS G SNA I+K++G D II A+ L+
Sbjct: 475 RPTYKLVIGSPGKSNAFAISKNLGIDDDIIDYAKSLI 511
>gi|225181647|ref|ZP_03735087.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
gi|225167628|gb|EEG76439.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
Length = 775
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 296/615 (48%), Gaps = 78/615 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
LE +++ +T+ A+++++ + L + D+ IL+ A G +L ++ V R L+AV
Sbjct: 39 LELARRWQAETTEAVSLIKRNQIGLERVPDLRRILDVAARGSMLGEEQLFGVWRLLQAVT 98
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ E + Y L L + + L L E++ +D + + D+AS +L
Sbjct: 99 KLKGFFKEK--------EGYPVLTGLTRQMDALPNLREELKNTLDEEGRL-RDQASAELL 149
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+R ++L + + + L+T R R+ V I+ ++ +P G+
Sbjct: 150 RLRRSINGGEQDLRERFDRFVRNPGNHKALQENLVTVRGDRLVVPIRQEYRSQVP-GVVH 208
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP AVE NN L E E IL L+ + + +
Sbjct: 209 DQSASGATLFIEPLWAVEANNRLTVLRREEEKERERILVRLSQWAGGEKETLVTSLTLYA 268
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D A+A + P L+ + ++ S +HPLL G
Sbjct: 269 ELDFIIAKARLSLAQKASEPKLNDRGYLHILSG------RHPLLTG-------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
DV VPI +++ R +VITGPNTGGKT ++KT+GL S+
Sbjct: 309 ----DV------------------VPISLEMGENLRTLVITGPNTGGKTVTLKTVGLFSI 346
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA+ L F I ADIGD Q + Q+LSTFSGH+ I+DIL + SLVL
Sbjct: 347 MAQSGLHVPAEEGSELAVFPRIFADIGDEQDITQSLSTFSGHLKNIIDILGQLVPGSLVL 406
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG LA +IL+YL + + V TTHY+ L ENA+ EF +
Sbjct: 407 LDEVGAGTDPTEGAGLAMAILEYLHNFGAVTVGTTHYSQLKTFAYVTQGMENASVEFDVA 466
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTY++L G G SNA IA+ +G D+ II+R ++ + +++ R E+ L+
Sbjct: 467 TLRPTYQLLVGVPGVSNAFAIAQRLGLDQDIIRRGKEFL-----SQEETRLEEVVADLVA 521
Query: 557 ERRKLESQARTA---------------------ASLHAEIMDLYREDSTSASISVYRYQF 595
+R+++E +R A +EI++ R D+ IS R
Sbjct: 522 DRQRIEVVSRQVEDERQQSKALLLQIQQEKEDLARRKSEILEKARRDAQETVISAKREAQ 581
Query: 596 AVTSTLSKVDFDAIP 610
+ L K+ A P
Sbjct: 582 QLLKQLRKMAAAASP 596
>gi|420189663|ref|ZP_14695631.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|420204084|ref|ZP_14709644.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
gi|394260998|gb|EJE05800.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|394274098|gb|EJE18523.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
Length = 782
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|423683336|ref|ZP_17658175.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
gi|383440110|gb|EID47885.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
Length = 785
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 289/574 (50%), Gaps = 65/574 (11%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G +LSP+E+ +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L A + K E DG + E L L+ELE I CID + LD A
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L IR + + R + L+S+L+ +AQ + +IT R R + +K ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+ E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + + +D FA+A +A+ V P +++ +V + +HPLL
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL D VP DI++ E +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL ++M+++GL++PA+ FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL PTY++L G G SNA I+K +G +I RA + + +
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ SL + +++ E++ + ++ AE L+R+
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRD 553
>gi|52081359|ref|YP_080150.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404490236|ref|YP_006714342.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|81690944|sp|Q65GE2.1|MUTS2_BACLD RecName: Full=MutS2 protein
gi|52004570|gb|AAU24512.1| DNA mismatch repair protein MutSB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349238|gb|AAU41872.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
Length = 785
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 289/574 (50%), Gaps = 65/574 (11%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G +LSP+E+ +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L A + K E DG + E L L+ELE I CID + LD A
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L IR + + R + L+S+L+ +AQ + +IT R R + +K ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+ E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + + +D FA+A +A+ V P +++ +V + +HPLL
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL D VP DI++ E +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL ++M+++GL++PA+ FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL PTY++L G G SNA I+K +G +I RA + + +
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ SL + +++ E++ + ++ AE L+R+
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRD 553
>gi|423611718|ref|ZP_17587579.1| MutS2 family protein [Bacillus cereus VD107]
gi|401247314|gb|EJR53654.1| MutS2 family protein [Bacillus cereus VD107]
Length = 633
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTEL---EEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TEL EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTELKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNNSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ +IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVLENIYQIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ L + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRLSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHSDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQH---RKSEL 550
ETL P Y+++ G +G+SNAL IA + ++QRA++ + + R ER RK +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEYVLQRAKEYMGNKEYRLERVNESKIRKPKF 527
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
Q EE + + R H + +Y+E ++ VY
Sbjct: 528 VQEKREEHYEYKKGDRVKLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|319647266|ref|ZP_08001488.1| MutS2 protein [Bacillus sp. BT1B_CT2]
gi|317390613|gb|EFV71418.1| MutS2 protein [Bacillus sp. BT1B_CT2]
Length = 785
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 290/574 (50%), Gaps = 65/574 (11%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G +LSP+E+ +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L A + K E DG + E L L+ELE I CID + LD A
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L IR + + R + L+S+L+ +AQ + +IT R R + +K ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+ E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + + +D FA+A +A+ V P +++ +V + +HPLL
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL D VP DI++ E +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL ++M+++GL++PA+ FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL PTY++L G G SNA I+K +G +I RA+ + + +
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRAKAEM-----TAEHNEV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ SL + +++ E++ + ++ AE L+R+
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRD 553
>gi|260587418|ref|ZP_05853331.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|260542285|gb|EEX22854.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
Length = 792
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 298/581 (51%), Gaps = 83/581 (14%)
Query: 16 SLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+L E + + +T+ ALA + Q L ++DI G L G L E+ ++ L
Sbjct: 39 NLNEIEIMQQETADALARIYQKGSLSFGGVKDIRGSLKRLEIGSTLGTGELLSLCSLLEN 98
Query: 75 VN--NVWKKLTEAAE----LDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
N + + A E LDG + LQ +PL ++ C L+E E
Sbjct: 99 TNRAKAYARRENAEEKQDSLDGMFEILQPLTPLALEIRRC-ILSEEE------------- 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 180
I D AS L+ IR R+M+N + K+ +Q+ + +G + ++T R R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA HK +P G+ + SS+G+T F+EP V+ NN L E AE ILS L+
Sbjct: 198 PVKAEHKGHVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
A++ I+ + + ++D FARA A+ + P +++ I+++ +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ VPID+++ + ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT S+KT+GL +LM ++GL++PA ++ RL F + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
+V +E R+SLVL DE+G+GTDP+EG ALA +IL +L + + TTHY++L
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
ENA+ EF +ETLRPTYR+L G G SNA I+ +G II +A+ E++
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
E + ++ +L + R+ +E++ A EI L ++
Sbjct: 513 EDESF--EDVLSTLEQSRKTIEAEEAEIARYKTEIESLKKQ 551
>gi|317059473|ref|ZP_07923958.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
gi|313685149|gb|EFS21984.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
Length = 778
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 255/498 (51%), Gaps = 52/498 (10%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + +K + L +E+ I ID + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + + +IT+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + EI + + +L ID A+A F
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG--------- 283
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L HV P++ G + L A P K V
Sbjct: 284 LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV--------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + R+ +F
Sbjct: 315 ---VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + DILE V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ +++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLV 535
AK +G ++II++AQ +
Sbjct: 492 AKRLGIPQEIIEKAQSYI 509
>gi|225018643|ref|ZP_03707835.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
DSM 5476]
gi|224948551|gb|EEG29760.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
DSM 5476]
Length = 795
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 240/465 (51%), Gaps = 74/465 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
I D AS +L IR + ++N ++LD ++K A + +IT R R V +
Sbjct: 145 IDDNASVELSNIRRKIRQNSTKARDSLDRIIKN------NAKYLQDSIITMRDGRYVVPV 198
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEI 241
KA H+ +P G+ + S+SGAT F+EP VE NN E+R L + E E IL+ L+AE
Sbjct: 199 KAEHRGEVP-GLVHDTSASGATLFVEPMSVVEANN-EIRVLMSKEQDEIERILAELSAEC 256
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A I+ ++ ++L FA+A M V P ++ ++S + +HPL+
Sbjct: 257 ADFAESIRNNFRLIILLNLYFAKANLGASMRAVKPFVTDDGYISLKKA------RHPLI- 309
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
D VPIDI++ ++ITGPNT
Sbjct: 310 ----------------------------------DKDKVVPIDIELGRGFTSLIITGPNT 335
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT S+KTLGL +LM+ GL +P + R+ FD +L DIGD QS+EQ+LSTFS H++
Sbjct: 336 GGKTVSLKTLGLLTLMTMCGLLIPVADQSRISIFDKVLVDIGDEQSIEQSLSTFSAHMTN 395
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ ILE SLVL+DE+GSGTDP EG ALA SI++ + R TTHYA+L
Sbjct: 396 IISILEEADDRSLVLVDELGSGTDPVEGAALAISIIEEISARGSRLAATTHYAELKAYAL 455
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---------- 531
+ ENA EF + TL+PTYR+L G G SNA I++ +G + I+ RA
Sbjct: 456 ETKGVENACCEFDVATLQPTYRLLIGVPGRSNAFAISRRLGLEEHILDRAEGYISSDNRR 515
Query: 532 -QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+ +V+ L RQ + K ER +LE + R L+A++
Sbjct: 516 FEDVVDSLEQARQDYEK---------ERAELEEKNREYERLNAQL 551
>gi|423521564|ref|ZP_17498037.1| MutS2 protein [Bacillus cereus HuA4-10]
gi|401177766|gb|EJQ84953.1| MutS2 protein [Bacillus cereus HuA4-10]
Length = 786
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 276/544 (50%), Gaps = 63/544 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + AE +G L P+L
Sbjct: 65 LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAE-NGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 EGHVAQIISLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
A I+K +G ++I RA+ + + + E + E +S ER++ E + + L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKSAEHERKEAEEHRKQSEKL 550
Query: 572 HAEI 575
H E+
Sbjct: 551 HREL 554
>gi|379011153|ref|YP_005268965.1| MutS-like protein [Acetobacterium woodii DSM 1030]
gi|375301942|gb|AFA48076.1| MutS-like protein [Acetobacterium woodii DSM 1030]
Length = 789
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 284/566 (50%), Gaps = 68/566 (12%)
Query: 24 LNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR---RTLRAVNNV 78
L+ T+ +L MM +P LS + + + + A G +LS E+ A+ R R ++N
Sbjct: 47 LDLTNESLGMMLRNGRP-PLSDVPNTSDYVKRAAIGSMLSMKELLAIATLLRISRDMDNY 105
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL---IILDRASEDL 135
+ T+ D+L L L+ C ELE++I K+L + D AS +L
Sbjct: 106 YHGDTQM-----DTLILLKDLFTSLETCE---ELEKEIS----RKILGPEEMADNASREL 153
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR E + + + L + + + + ++T R +R + +K ++ +P GI
Sbjct: 154 SRIRREMQFKYKRISEKLNHMISSTSYDKMLQEKIVTIRNNRYVIPVKQEYRSQVP-GIV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ S+SGAT F+EP VE NN L E E IL L+ +A EI D +
Sbjct: 213 LDKSASGATLFIEPIAVVELNNDIKILVAEEEQEIVRILKELSQNVADQRDEIICNYDIL 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+++D FA+ + ++GV ++ VS I + KHPL+
Sbjct: 273 IDLDFQFAKGKYGLAINGV------KTDVSETGRIALLRAKHPLI--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
P E V S DI E E +VITGPNTGGKT S+KT+GL +
Sbjct: 312 -P-------DEQVVAS------------DIYFEEEIDTMVITGPNTGGKTVSLKTIGLLN 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL++P + + F I ADIGD QS+EQNLSTFS H++ IV+I+ +SLV
Sbjct: 352 LMVQSGLFIPVREGSKTRIFTNIFADIGDEQSIEQNLSTFSSHMTNIVEIMNKADHDSLV 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP+EG ALA SIL L R ++ TTHY++L NA+ EF +
Sbjct: 412 LFDELGAGTDPTEGAALAISILNALHLRHVTSISTTHYSELKEFALVTPGVVNASVEFDI 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
+TLRPTYR+L G G SNA IA +G +I+ A++L+ + + R E +
Sbjct: 472 KTLRPTYRLLIGVPGKSNAFEIAVRLGLAETVIENAKELI-----KNEAIRFEETLIKID 526
Query: 556 EERRKLESQARTAASLHAEIMDLYRE 581
E+RR+ E++ L + +L R+
Sbjct: 527 EKRRRTEAEHDAIIRLKRDTEELKRQ 552
>gi|302672186|ref|YP_003832146.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
gi|302396659|gb|ADL35564.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
Length = 797
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 224/412 (54%), Gaps = 47/412 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
++T R R CV ++A +K + +GI + SSSG+T F+EP VE NN L E AE
Sbjct: 187 VVTMRDDRYCVPVRAEYKSQI-NGIVHDQSSSGSTLFIEPAAVVELNNKIKELVLQENAE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL L+ ++ + IKY D + ++D FA+A +A ++ + P+ + SFD
Sbjct: 246 IEKILLELSLQVGEHAEAIKYNSDIMTDLDFVFAKASYALEINAISPVFNDNH--SFD-- 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+ +HPL+ + N + VPID+
Sbjct: 302 --IKKGRHPLI-------------DKNKV----------------------VPIDVYAGK 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++ITGPNTGGKT ++KT+GL +LM +AGL +PA + L FD + ADIGD QS+E
Sbjct: 325 DFDMLIITGPNTGGKTVTLKTVGLLTLMGQAGLAIPAGDKSELSVFDEVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ V ILE SL L DE+G+GTDP+EG ALA SIL L +R +
Sbjct: 385 QSLSTFSSHMTNTVKILENADSNSLCLFDELGAGTDPTEGAALAISILNNLHERQVRTLA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L +NA+ EF +E+LRPTYR+L G G SNA I+ +G +II
Sbjct: 445 TTHYSELKIYALNTPGIQNASCEFDVESLRPTYRLLIGIPGKSNAFAISSKLGLSEEIIN 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
A+ E++ E ++ +L L + R+ +E++ A E+ +L E
Sbjct: 505 AAK---EQIGTEDKKFE--DLLSDLEKSRKTIENERLEIAQYKREVEELKAE 551
>gi|307244041|ref|ZP_07526160.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492565|gb|EFM64599.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
Length = 807
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 294/577 (50%), Gaps = 64/577 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+ EE + +T+ A +++ ++ + L I DI A G +L P + + T+RA
Sbjct: 39 TFEEVKTAQEETTEAQSILINRGHVPLEGIHDIGDKAKRADLGAVLEPKSLLDLADTMRA 98
Query: 75 ---VNNVW----KKLT---EAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCK 123
++NV KK T +D + + P+++ L ++ ++EE+I I +
Sbjct: 99 TRVLSNVLSGQIKKETFGNSETSIDEEDDEIKYPIIQSLATSLYIHKDIEEEIFNAIISE 158
Query: 124 LLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
L I D AS +L IR + +++ S L + + + +I+ R R V +K
Sbjct: 159 LEI-ADSASPELRSIRRRILQKNQSIRSKLNGIISSTTYQKYLQDAIISMRGDRFVVPVK 217
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A ++ ++ GI + SSSGAT F+EP VE NN +L E E IL+ L+A + +
Sbjct: 218 AEYRSMMA-GIIHDQSSSGATLFIEPMTIVEMNNDLRQLKLQEKEEIEKILANLSAMVGQ 276
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
RE+ + + ++D AFA+ + M P L+ D + I G +HPLL
Sbjct: 277 VSRELLSNQEILAKLDFAFAKGKLSIDMKATEPDLNQ------DRLVRIVGGRHPLL--- 327
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
KS V N DI + + ++ITGPNTGG
Sbjct: 328 -------------DRKSVVAN-------------------DIILGGDYSTLLITGPNTGG 355
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KTLGL +LM++ GL+L A + FD I ADIGD QS+EQNLSTFS H++RIV
Sbjct: 356 KTVTIKTLGLFALMTQCGLHLSANYGTSMCIFDQIFADIGDDQSIEQNLSTFSSHMTRIV 415
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS--CLKD 481
DI+E V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R + TTHY++L L
Sbjct: 416 DIVERVTDQSLVIFDELGAGTDPEEGAALAIAILENIRSSGASCIATTHYSELKKYALAK 475
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
KD ENAA EF + TL PTYR+L G G SNA I++ +G II +A+ + E
Sbjct: 476 KD--VENAAVEFDMGTLSPTYRLLIGVPGKSNAFEISRKLGLGEHIIDQAKNFLTNEDIE 533
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ E+ Q++ + R K + + A EI D+
Sbjct: 534 IE-----EVLQNVEKSRLKTQEELERAERYRQEIEDI 565
>gi|347530511|ref|YP_004837274.1| DNA mismatch repair protein [Roseburia hominis A2-183]
gi|345500659|gb|AEN95342.1| DNA mismatch repair protein [Roseburia hominis A2-183]
Length = 795
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 256/518 (49%), Gaps = 48/518 (9%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++L QTS AL+ + + L S + DI L G LS E+ V L +
Sbjct: 44 EQLQQQTSDALSRLFKYGSLSFSGVTDIRDSLKRLEIGGALSAIELLRVCSLLESA---- 99
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
K+ A D+ Q L L LT L ++I CI + I D AS L IR
Sbjct: 100 KRAKAFARSQDDNDQPDDSLTSLFAGIEPLTPLCDEIRRCILSEDEIA-DDASSTLHSIR 158
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+ + + + + + + +IT R R C+ +KA K L+P G+ + S
Sbjct: 159 RSMRGMNDKIRAQMNSMINNTTTRSYLQDTVITMRDGRYCLPVKAEAKSLVP-GMIHDQS 217
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
S+G+T F+EP V NN L E E IL+ L+ A ++ + + E+D
Sbjct: 218 STGSTLFIEPMAVVNLNNEYKELQLREQEEIEVILAGLSNLTASYATQLLADYELLTELD 277
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FARA FAQ +GV P+ + D I+I +HPLL +P K
Sbjct: 278 FIFARAAFAQTYNGVAPLFND------DGRIHIRKGRHPLL---------------DPKK 316
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPID+++ + R++++TGPNTGGKT S+KT+GL +LM +
Sbjct: 317 V--------------------VPIDVRLGEDFRLLIVTGPNTGGKTVSLKTVGLLTLMGQ 356
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL++PA L FD + ADIGD QS+EQ+LSTFS H+ I+ ILE V+ SLVL DE
Sbjct: 357 SGLHIPASERSELGIFDEVFADIGDEQSIEQSLSTFSSHMVNIIRILEQVNDRSLVLFDE 416
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+ +GTDP+EG ALA SIL L + TTHY++L ENA EF + TL
Sbjct: 417 LCAGTDPTEGAALAISILSKLHLYGARIMATTHYSELKVYALSTPGVENACCEFDVATLS 476
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
PTYR+L G G SNA I++ +G +I A+ + +
Sbjct: 477 PTYRLLIGIPGKSNAFAISEKLGLPSDLITDAKGRISK 514
>gi|315917841|ref|ZP_07914081.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
gi|313691716|gb|EFS28551.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
Length = 778
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 255/498 (51%), Gaps = 52/498 (10%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + +K + L +E+ I ID + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + + +IT+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + EI + + +L ID A+A F
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG--------- 283
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L HV P++ G + L A P K V
Sbjct: 284 LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV--------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + R+ +F
Sbjct: 315 ---VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + DILE V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ +++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLV 535
AK +G ++II++AQ +
Sbjct: 492 AKRLGIPQEIIEKAQSYI 509
>gi|417645954|ref|ZP_12295839.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
gi|329729966|gb|EGG66357.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
Length = 782
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA H+ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEHRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|295706821|ref|YP_003599896.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
gi|294804480|gb|ADF41546.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
Length = 787
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 270/526 (51%), Gaps = 70/526 (13%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + + PL I D+ + A G LS +E+ V T+ A V K
Sbjct: 47 QEATDEATTVLRLRGNVPL--GGIFDVRPSVKRAEIGGTLSSNELLDVASTIYAARQV-K 103
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E D D LQ P++ E ++ L E+E+ I ID +LD AS+ L IR
Sbjct: 104 QFIEQVVEDED-LQL--PIITEHIEKLMPLPEVEQTIKMSIDENG-TVLDGASDQLRGIR 159
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ + R E L+SL++ +AQ + I +T R R + +K ++ GI
Sbjct: 160 QKLRSTESRIREKLESLIRSSSAQKMLSDAI----VTIRNERFVIPVKQEYRSAY-GGIV 214
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI------LSLLTAEIAKSEREIK 249
+ SSSGAT F+EP+ V NN L +++ E+ I L++ AE+A R+
Sbjct: 215 HDQSSSGATLFIEPQAIVTLNN---ELQEAKVKEKQEIERILIALTVQVAEVANELRQNV 271
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
YL+ E+D FA+ ++ + P ++ + ++ + KHPL+
Sbjct: 272 YLLG---ELDFMFAKGRYSHELKASKPKMNDRGYIKLVKA------KHPLIA-------- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+ DV V DI++ + +VITGPNTGGKT ++K
Sbjct: 315 ---------QEDV------------------VANDIELGDQYTSIVITGPNTGGKTVTLK 347
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 348 TLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDILQKV 407
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L NA
Sbjct: 408 DHESLVLFDELGAGTDPQEGAALAISILDQVYERGARVVATTHYPELKAYGYNREGVVNA 467
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ EF +ETL PTY++L G G SNA I+K +G ++I+RA+ +
Sbjct: 468 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSAEVIERAKGYI 513
>gi|403237728|ref|ZP_10916314.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 10403023]
Length = 786
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 264/523 (50%), Gaps = 58/523 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
++EE L QT A +++ + + L + DI + A G L+ E+ + T+ A
Sbjct: 39 NVEEVIFLQEQTDEAAKVLRLKGNVPLGGLTDIRAAVKRASIGGALNTLELLDIAGTIYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
KK E D L P+L EL+ + L ELE+KI CID +++D AS+
Sbjct: 99 -GRQMKKFIEGMIEDDIEL----PILAELITSITPLYELEQKIKNCIDDNG-VVMDGASD 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R E LD +++ +AQ + +IT R R + +K ++
Sbjct: 153 KLRGIRQQLRSSEARIREKLDHIIRSSSAQ----KTLSDAIITIRNDRYVIPVKQEYRGT 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN+ E E IL L+ E+A +
Sbjct: 209 Y-GGIVHDQSSSGATLFIEPQSVVDLNNVLQEARVKEKQEIDRILFELSNEVALETESLY 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + E+D F +A +++ + G P ++ +V +HPL+ +
Sbjct: 268 QNVDTLGELDFMFTKASYSKKVKGSKPKINGNGYVLIKKG------RHPLIAPKDV---- 317
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP DI++ + +VITGPNTGGKT ++K
Sbjct: 318 -------------------------------VPNDIELGKKYTSIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL ++M+++GL +PA+ + F+ + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 347 TIGLLTIMAQSGLQIPAQEESEIAVFESVYADIGDEQSIEQSLSTFSSHMVNIVDILKRV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP EG ALA SIL + +R + TTHY +L NA
Sbjct: 407 DSTSLVLFDELGAGTDPQEGAALAISILDEVYNRGARVIATTHYPELKAYGYNREGVINA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF +ETL PTY++L G G SNA I+K +G II A+
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSDTIIHAAK 509
>gi|421860087|ref|ZP_16292245.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
gi|410830291|dbj|GAC42682.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
Length = 785
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 298/574 (51%), Gaps = 79/574 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
EE ++ L T A+ + ++ P L+ ++DI G L A +LS +E+ + L A
Sbjct: 40 FEEVKRRLQATDEAMTVERLKGGP-PLAGVKDIRGALKRARIQAILSSTELWDISALLFA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ E + PLL+ L + + +LEE I CID + I LD+AS
Sbjct: 99 ARRTKHHIAAVHE------EEAIPLLQDLAETISDQKQLEEDIRQCIDEQGEI-LDQASF 151
Query: 134 DLELIRAERK----RNMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
+L IR E + R E L+++++ AA++ Q + LIT R R + +K ++
Sbjct: 152 ELAAIRRELRTGETRIREKLEAMIRTSNAAKMLQ-----EQLITIRNDRYVIPVKQEYRS 206
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSE 245
GI + S SGAT F+EP+ V NN L +++ EE I LS LT +
Sbjct: 207 HY-SGIVHDQSGSGATLFIEPEAIVAMNN---HLRETKLREEREIERILSRLTDRVGLIA 262
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
++Y V +D FA+A A+ M P ++ + + + HPL+
Sbjct: 263 DVLEYDTGAVETLDFMFAKARLAREMKASLPRMNDRGFLKLRQAC------HPLI----- 311
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
P +D VPI +++ +++TGPNTGGKT
Sbjct: 312 -----------P-------------------ADQVVPIHVELGNSYTSILVTGPNTGGKT 341
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL SLM+ +GL++PA++ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ I
Sbjct: 342 VTLKTIGLLSLMAMSGLFIPAEDGSQMCVFDTIYADIGDEQSIEQSLSTFSSHLTNIIRI 401
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
LE ++ +SLVL+DE+G+GTDP+EG ALA +IL+++ R+G +V TTHY++L +
Sbjct: 402 LEQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHIH-RLGCRMVATTHYSELKAYAYERK 460
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF ++TLRPTYR+L G G SNA IA+ +G + II A+ V +
Sbjct: 461 GVINASMEFDVQTLRPTYRLLIGVPGRSNAFAIAERLGLPKSIIDHARGEV-----TEED 515
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
R + SL + R K E++ TA+ L MDL
Sbjct: 516 MRVETMIASLEDNRLKAEAERETASKLR---MDL 546
>gi|408356333|ref|YP_006844864.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
gi|407727104|dbj|BAM47102.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
Length = 783
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 235/443 (53%), Gaps = 54/443 (12%)
Query: 98 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSL 152
P++ EL+ L LE +I CID + LD AS L IR + + N + LDSL
Sbjct: 117 PIIRELVGQIELLNHLEREIKSCIDDNGHV-LDGASSKLRQIRMKIRTNESRIRDRLDSL 175
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
K + + A ++T R R + +K ++ GI + SSSG T F+EP+
Sbjct: 176 TKSKSKMLSDA------IVTIRNDRYVLPVKQEYRGAF-GGIVHDQSSSGQTLFIEPQVV 228
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
VE NN E AE IL L+ EI + + + + ++D FARA + M
Sbjct: 229 VEINNQLSEARAQEKAEIERILRQLSQEIGTHHPYLTHNVKILTQLDFIFARAKLGRSMK 288
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P ++ Q I+I+ +HPLL N + V +
Sbjct: 289 AAMPKMNDQG------IIDIKQARHPLL-----------------------NEDEVVAN- 318
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
DI + + +VITGPNTGGKT ++K +GLA+LM+++GL +PA + RL
Sbjct: 319 -----------DILLGEDYHAIVITGPNTGGKTVTLKLVGLATLMAQSGLQVPALDGCRL 367
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
FD + ADIGD QS+EQ+LSTFS H+++IV IL+ V+ +SLVL DE+G+GTDP EG AL
Sbjct: 368 AVFDEVFADIGDEQSIEQSLSTFSSHMTQIVKILKQVNHKSLVLFDELGAGTDPQEGAAL 427
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +IL Y+ ++ + TTHY +L NA+ EF +++L+PTYR+L G G S
Sbjct: 428 AMAILDYVVNKKARVIATTHYPELKAYGYNRDGVINASVEFDVKSLQPTYRLLIGVPGRS 487
Query: 513 NALNIAKSIGFDRKIIQRAQKLV 535
NA I++ +G D +II+ ++L+
Sbjct: 488 NAFEISRRLGLDDQIIEAGKQLI 510
>gi|126652668|ref|ZP_01724829.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
gi|126590517|gb|EAZ84635.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
Length = 788
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 275/565 (48%), Gaps = 60/565 (10%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + L++++ + + + I D+ A G +L+ E+ + T+RA + + +
Sbjct: 46 QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAIELMEISSTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +L+ D + + + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DLEADEVIEIPHFIAKKETMPVLTGLQHEINNCIDDNG-AVLDSASTTLRTIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + L+SL++ A + L+T R R + +K +++ GI
Sbjct: 162 SLRSEEAKVRSKLESLIRGSNASKM----LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG T F+EP V+ NN RL E AE IL L+A + ++ L+ +
Sbjct: 217 DQSSSGQTLFIEPDSIVQANNEIHRLKMKEQAEVERILLALSAMVQDVAPDLFNLVKVLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+ID+ A+ + Q P ++ D I + +HPLL
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLVRARHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P+ D VP DI+ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DTAVPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL +PA + +L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ ESLVL
Sbjct: 356 MAQAGLPVPALDGSQLAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDDESLVL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SIL + R + TTHY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+ +G II+RA+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPETIIERAKGFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTAASLHAEIMDLYRE 581
RR+ E A + +L E L +E
Sbjct: 531 TRRQSEDDAERSHALLLESESLRKE 555
>gi|331083698|ref|ZP_08332809.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403909|gb|EGG83461.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 792
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 296/578 (51%), Gaps = 83/578 (14%)
Query: 16 SLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+L E + + +T+ ALA + Q L ++DI G L G L E+ ++ L
Sbjct: 39 NLNEIEIMQQETADALARIYQKGSLSFGGVKDIRGSLKRLEIGSTLGTGELLSLCSLLEN 98
Query: 75 VN--NVWKKLTEAAE----LDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
N + + A E LDG + LQ +PL ++ C L+E E
Sbjct: 99 TNRAKAYARRENAEEKQDSLDGMFEILQPLTPLALEIRRC-ILSEEE------------- 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 180
I D AS L+ IR R+M+N + K+ +Q+ + +G + ++T R R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA HK +P G+ + SS+G+T F+EP V+ NN L E AE ILS L+
Sbjct: 198 PVKAEHKGQVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
A++ I+ + + ++D FARA A+ + P +++ I+++ +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ VPID+++ + ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT S+KT+GL +LM ++GL++PA ++ RL F + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
+V +E R+SLVL DE+G+GTDP+EG ALA +IL +L + + TTHY++L
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
ENA+ EF +ETLRPTYR+L G G SNA I+ +G II +A+ E++
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
E + ++ +L + R+ +E++ A EI L
Sbjct: 513 EDESF--EDVLSTLEQSRKTIEAEEAEIARYKTEIESL 548
>gi|387930060|ref|ZP_10132737.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
gi|387586878|gb|EIJ79202.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
Length = 785
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 288/584 (49%), Gaps = 64/584 (10%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
E +L +T A+ +++ + + L I DI A G LSP E+ V T+ A
Sbjct: 40 FHEVVQLQEETDEAVKVLRLKGNVPLGGIFDIRPHTKRAAIGGSLSPHELIQVASTVHAS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + + + E D P+L + ++ L ELEE I ID + +LD ASE
Sbjct: 100 RQLKRFIEDLNEETNDL-----PILAKYVERIIVLAELEEAIKHAID-ESGEVLDGASET 153
Query: 135 L----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L + +R + R E L+S+++ AQ + I +T R R + +K ++
Sbjct: 154 LRSLRQQLRTKEARVRERLESMIRSSNAQKMLSDAI----VTIRNDRFVIPVKQEYRTYY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP+ V+ NN E E IL L+ ++ + E++
Sbjct: 210 -GGIIHDQSSSGQTLFIEPQAIVQLNNDLQATRVKEQQEIERILHELSQKVGEYSGELET 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + E+D FA+A ++ + P+++++ +S + +HPL+
Sbjct: 269 IVLVLAELDFMFAKARYSSKIKASKPLMNNEGRISLIKA------RHPLI---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P+ D VP DI + + +VITGPNTGGKT ++KT
Sbjct: 313 ------PI-------------------DEVVPNDISLGKDFSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL +LM+++GL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 348 VGLCTLMAQSGLQIPALDGSEMAVFGSVYADIGDEQSIEQSLSTFSSHMVNIVDILNKVD 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA+
Sbjct: 408 FNSLVLFDELGAGTDPQEGAALAISILDEVYKRGAKVIATTHYPELKVYGYNREGVINAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I+K +G D K+I A+ V + Q K +
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLDEKVINNARSYV---GADSSQVEK--M 522
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQ 594
SL RR+ E+ A L + L++ D I+ Y Y+
Sbjct: 523 IASLESSRRQTEADLEEANDLLKQAEKLHK-DLQKQMIAFYEYK 565
>gi|417643505|ref|ZP_12293552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri VCU121]
gi|330685726|gb|EGG97362.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU121]
Length = 782
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 262/500 (52%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + +A ++ + G +L+ +E+ A++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLTKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ LT+L + I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A + + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANR----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT+++A E + L + ++ +D A+A +A+ + G
Sbjct: 236 NQISRLHNDEAVERERILTELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P ++ V ++ HPLL + +N+ D+E
Sbjct: 295 PTFHNERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|291521669|emb|CBK79962.1| MutS2 family protein [Coprococcus catus GD/7]
Length = 793
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 276/557 (49%), Gaps = 56/557 (10%)
Query: 26 QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLT 83
+TS AL +M+ L S I DI G L G + +E+ + TL A+
Sbjct: 49 ETSDALTRVMKKGSLSFSGIRDIRGSLLRLKVGSTVGMAELLNIAATLDVALRAKSYGRR 108
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
EA + D DSL+ +E L N N +I CI + D AS L+ IR + K
Sbjct: 109 EADDEDQDSLEGLFAQIEPLSNLN------HEIRRCI-IDEETMADDASPTLKSIRRQIK 161
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
E + S L + + + L+T R R C+ +KA ++ + G+ + SS+G+
Sbjct: 162 LTNERIHSQLASMVSSQNIGSKLQDNLVTMRNGRYCLPVKAEYRSQV-QGMIHDQSSTGS 220
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T F+EP V+ NN L + E E IL L+ KS ++ + + +D FA
Sbjct: 221 TLFIEPMAVVKLNNDLRELGSKEKEEIEHILDTLSELAGKSAVMLEQDIAVLTRLDFIFA 280
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+A ++ +G P+ + + I+I+ +HPLL +
Sbjct: 281 KASLSRTYNGSEPVFNENGY------IHIKKGRHPLLDKKKV------------------ 316
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VPID+ + + R++++TGPNTGGKT S+KT+GL +LM +AGL+
Sbjct: 317 -----------------VPIDLILGKDYRMLIVTGPNTGGKTVSLKTVGLFTLMGQAGLH 359
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA +H L FD + ADIGD QS+EQ+LSTFS H++ IV IL ++LVL DE+ +G
Sbjct: 360 IPAFDHSELAVFDDVFADIGDEQSIEQSLSTFSSHMTNIVRILNAADAKTLVLFDELCAG 419
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG ALA +IL+ L +R + TTHY++L + NA EF + TL PTYR
Sbjct: 420 TDPTEGAALAIAILKTLLNRHVTTMATTHYSELKVFALTTEQVCNACCEFDVATLSPTYR 479
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
+L G G SNA I+ +G II+ A+K + + Q+ EL L R +E
Sbjct: 480 LLIGIPGKSNAFAISGKLGLPAHIIEEAKKNI-----DVQEQNFEELIADLETSRATIEK 534
Query: 564 QARTAASLHAEIMDLYR 580
+ ++ A++ L +
Sbjct: 535 EQEELSAYKAQVESLKK 551
>gi|402833826|ref|ZP_10882436.1| MutS2 family protein [Selenomonas sp. CM52]
gi|402279672|gb|EJU28454.1| MutS2 family protein [Selenomonas sp. CM52]
Length = 791
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 184/569 (32%), Positives = 282/569 (49%), Gaps = 64/569 (11%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A +P G E ++LL +T A+ + + + DI L A G +L +
Sbjct: 32 RAVLPSG-DFAEVEELLRETEEAVRLSAFSSPPMGGVFDIRESLAKAERGAVLDLGDFTD 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ T+RA+ V K+ + E+D PL+ E K L +LE ++ +D +
Sbjct: 91 LLSTMRAMRAV-KRFFKEVEMD-------LPLIKEQAKGIEILGQLERRLENSVD-EHGN 141
Query: 127 ILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS +L IR E + E ++++L + Q F +IT+R R + I
Sbjct: 142 LLDDASVELSRIRRELRSGRRRAKEQMEAILHRTEYQKF----FQDAIITQRAERNVIPI 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ P GI + S+SGAT F+EP V+ NN +L+ +E E IL LL+ E+
Sbjct: 198 KQEYRQSFP-GIVHDQSASGATLFIEPMALVDLNNDLKQLALAEKTEVQRILRLLSQEVG 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
K+ ++ + +D FARA A M P ++ + ++ +HPL+
Sbjct: 257 KNGSVLEGNCAILASLDFIFARAKLAADMQATRPAINREGRTKLVAA------RHPLIDA 310
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+ + VPIDI + R+++ITGPNTG
Sbjct: 311 AKV-----------------------------------VPIDIALGESYRMLLITGPNTG 335
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL +LM ++G Y+PA + + + IGD QS+EQ+LSTFS H+S +
Sbjct: 336 GKTVSLKTIGLFALMVQSGCYIPAAAGSEISVYTNVYTVIGDEQSIEQSLSTFSAHMSHL 395
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V +LE V L+L+DEIG+GTDP EG ALA +IL+ R +VTTHY++L
Sbjct: 396 VKLLECVEGTDLLLLDEIGAGTDPEEGAALAMAILEQFLARGASTIVTTHYSELKTFAFT 455
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
ENA EF +ETLRPTYR+L G G SNA I++ +G I RAQ+ ++ +
Sbjct: 456 REGIENACVEFDVETLRPTYRLLTGMPGASNAFAISRRLGLSEAAILRAQQFIKADHAQF 515
Query: 543 QQHRKSELYQSLMEERRK---LESQARTA 568
++ + LM E+R LE Q R A
Sbjct: 516 EKVVNQLESEKLMYEQRNADILERQQRVA 544
>gi|418891775|ref|ZP_13445890.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|377731107|gb|EHT55164.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
Length = 782
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A ++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|417910746|ref|ZP_12554462.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|418622194|ref|ZP_13184950.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|420187633|ref|ZP_14693653.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
gi|341654934|gb|EGS78670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|374827569|gb|EHR91431.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|394256075|gb|EJE01011.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
Length = 782
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 256/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAHTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNTFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|319651779|ref|ZP_08005905.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
gi|317396598|gb|EFV77310.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
Length = 785
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 253/499 (50%), Gaps = 55/499 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + AV G +LSP E+ + T+ A + + + E AE + LL
Sbjct: 65 LGGIFDIRPHVKRAVIGGMLSPQELNQISSTIHASRQMKRFIEEFAEEESS----LPILL 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKV 156
L +LE I +D + LD ASE L +R + R E L+S+++
Sbjct: 121 GYTDKIIVLADLETSIRNAVDDNGEV-LDSASETLRSLRNQLRTKESRVRERLESMIRST 179
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+AQ + I IT R R + +K ++ GI + SSSG T F+EP V+ N
Sbjct: 180 SAQKMLSDAI----ITIRNDRFVIPVKQEYRGHY-GGIIHDQSSSGQTLFIEPASIVQLN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + E E IL L+ + A++ E++ +++ + EID FA+A +++ + P
Sbjct: 235 NELQGIRVKEQQEIERILIALSVQAAENSSELETIVEVLGEIDFMFAKARYSKRIKASKP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++++ +S + +HPL+ P+ V N
Sbjct: 295 KINNEGIISLFKA------RHPLI----------------PIDEVVAN------------ 320
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
DIK+ E +VITGPNTGGKT ++KT+GL +LM++AGL +PA + F
Sbjct: 321 -------DIKLGAEYSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQIPALDGSETAVFG 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA SI
Sbjct: 374 NVYADIGDEQSIEQSLSTFSSHMVNIVDILDQVDFNSLVLFDELGAGTDPQEGAALAISI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 LDEVYKRGARVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I+K +G ++I+ A+ +
Sbjct: 494 ISKRLGLKDQVIETARSYI 512
>gi|49483307|ref|YP_040531.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA252]
gi|282903692|ref|ZP_06311580.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|282905461|ref|ZP_06313316.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908435|ref|ZP_06316266.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|283957887|ref|ZP_06375338.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427631|ref|ZP_06820263.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591415|ref|ZP_06950053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|415684425|ref|ZP_11449554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|418566423|ref|ZP_13130804.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|418581975|ref|ZP_13146053.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|418595208|ref|ZP_13158829.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|418602382|ref|ZP_13165788.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|418897682|ref|ZP_13451752.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900552|ref|ZP_13454609.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908854|ref|ZP_13462859.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|418916937|ref|ZP_13470896.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922724|ref|ZP_13476641.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982055|ref|ZP_13529763.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985723|ref|ZP_13533409.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|56749238|sp|Q6GHU1.1|MUTS2_STAAR RecName: Full=MutS2 protein
gi|49241436|emb|CAG40120.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MRSA252]
gi|282328100|gb|EFB58382.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330753|gb|EFB60267.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595310|gb|EFC00274.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|283790036|gb|EFC28853.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295127989|gb|EFG57623.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576301|gb|EFH95017.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|315193814|gb|EFU24209.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|371970636|gb|EHO88053.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|374396082|gb|EHQ67333.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|374402075|gb|EHQ73118.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|377703020|gb|EHT27336.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|377704336|gb|EHT28645.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|377705541|gb|EHT29845.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377710385|gb|EHT34623.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|377736047|gb|EHT60077.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|377750111|gb|EHT74049.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|377754850|gb|EHT78756.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|377760717|gb|EHT84593.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 782
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 287/553 (51%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A ++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y++
Sbjct: 549 EQVHDDLSKQYQQ 561
>gi|418307751|ref|ZP_12919430.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21194]
gi|365243513|gb|EHM84189.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21194]
Length = 519
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|417655589|ref|ZP_12305299.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21193]
gi|329728807|gb|EGG65228.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21193]
Length = 519
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLLLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|304317232|ref|YP_003852377.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778734|gb|ADL69293.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 786
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 269/523 (51%), Gaps = 56/523 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+L+++ K +++ + A++ + S + I ILN A L+ ++ + R L
Sbjct: 39 NLDKAAKEIDKVNEAVSFISSYGNMSFAFKKIDDILNKAKIKSTLNIGQLMTISRFLSLA 98
Query: 76 NNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
V L +E E + L+ Y+ L L+ +L E+I +++I D S+D
Sbjct: 99 GRVKSYLRSEKEESNYPLLREYNIRLTNLR------DLYERID-----RIVISEDELSDD 147
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPD 192
+ +R ++++ +K I + + P+IT R R V +K ++ +
Sbjct: 148 ASPALKDIRRQKAHINNKIKDTLNSIIASSSKELQDPIITIRNGRYVVPVKQEYRGMFK- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + SSSGAT F+EP VE NN +L E E ILS LT +I++ EI M
Sbjct: 207 GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEIHENM 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ E+D+ FA+A ++ + P+ ++ + IN++ +HPLL
Sbjct: 267 IALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL------------ 308
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
P D VPI + + +VITGPNTGGKT ++KT+G
Sbjct: 309 ----P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTLKTVG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+ +GL +P + +FD I DIGD QS+EQ+LSTFS H++ IV IL V+
Sbjct: 346 LLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNSVTSN 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA SIL +L + TTHY++L K+ ENA+ E
Sbjct: 406 SLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVENASVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
F +ETLRPTYR+ G G SNA I++ +G + +II A+ +
Sbjct: 466 FDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYI 508
>gi|83590547|ref|YP_430556.1| MutS2 family protein [Moorella thermoacetica ATCC 39073]
gi|83573461|gb|ABC20013.1| DNA mismatch repair protein, MutS family [Moorella thermoacetica
ATCC 39073]
Length = 801
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 175/525 (33%), Positives = 261/525 (49%), Gaps = 64/525 (12%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L L +DI +N A +G +L E+ V TL A + + L L+G+ +
Sbjct: 69 LPLGNFQDIRPEINRAAAGAILEGQELLRVATTLAAGRRLRQFLLG---LEGE----WPV 121
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLK 154
L L +LE I I L+ LD+A+ L + +R ++R E LDS L+
Sbjct: 122 LKGLAAGIGDFRQLERAITAAIGPDGLV-LDQATPRLASLRQQVRQAQERIKERLDSYLR 180
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q + + L T R R + +K +++ +P G+ + S+SGAT F+EP VE
Sbjct: 181 STEMQKY----LQDNLFTIRNDRYVLPVKQEYRHQVP-GLVHDQSASGATLFIEPMALVE 235
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
NN RL +E E AIL L+ + + EI + + E+D A+ +Q M V
Sbjct: 236 LNNELRRLQTAEAREVEAILLHLSKLVGGQKEEILASLAALGELDFTLAKGRLSQAMAAV 295
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L++ I +HPLL G
Sbjct: 296 PPRLNA------GGRWRIRQGRHPLLGGRV------------------------------ 319
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+ + + + +VITGPNTGGKT ++KT+GL +LM++ GL+LPA + +
Sbjct: 320 ------VPVSLTLGEDFDTLVITGPNTGGKTVTLKTMGLFTLMAQCGLHLPAADGTEVDV 373
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
+ ADIGD QS+EQ+LSTFS H+ +IV I+ V SLVL+DE+G+GTDP+EG ALA
Sbjct: 374 TAAVYADIGDEQSIEQSLSTFSAHMRQIVAIVREVEAGSLVLLDELGAGTDPTEGAALAM 433
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+IL YL V TTH+++L R ENAA EF ETL+PTY++L G+ G+SNA
Sbjct: 434 AILDYLTGVGARTVATTHFSELKAYAYATPRVENAAVEFDSETLQPTYKLLIGTPGESNA 493
Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
+A +G +I++A+ + + R S L + L +RR
Sbjct: 494 FAVAGRLGLPPALIEQARGFL-----SEENRRVSRLIEGLTADRR 533
>gi|73662960|ref|YP_301741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|123642323|sp|Q49WR1.1|MUTS2_STAS1 RecName: Full=MutS2 protein
gi|72495475|dbj|BAE18796.1| MutS-like protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 782
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 265/500 (53%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +LS SE+ ++R ++ + N +K L+ + Y L
Sbjct: 65 LSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQ-IQNQYKTFYNNL-LNEEETINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ ++ L++L + I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DRMEQLPVLSDLYQSI--HQKCDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE +
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMS 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E ILS LT E+A+ E + + + ++ +ID A+A +A + G
Sbjct: 236 NQISRLKNDEAIERERILSALTVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + D ++ + HPLL ++ +N+ D+E
Sbjct: 295 PQFTK------DRTVYLPKAFHPLLDKQTV------VANTIEFAQDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++ + L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDHVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G + K+IQ+A+ ++
Sbjct: 494 DISKKLGLNMKVIQKAKSMI 513
>gi|295090651|emb|CBK76758.1| MutS2 family protein [Clostridium cf. saccharolyticum K10]
Length = 816
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 274/557 (49%), Gaps = 65/557 (11%)
Query: 27 TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLTEA 85
T A + Q L ++DI L G L+ E+ AV L A E
Sbjct: 51 TDAVTRVRQKGSLSFGGVKDITDSLKRLEIGSSLNIMELLAVSSVLTVAARAKSYGRREE 110
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 143
+EL DSL LLE L N TE++ CI + + D AS L +R + K
Sbjct: 111 SELPDDSLDEMFRLLEPLTPVN--TEIKR----CILSEDEVS-DDASPGLRQVRRQMKVI 163
Query: 144 --RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
R L+S+L + A +IT R R C+ +KA HK +P G+ + S++
Sbjct: 164 NDRIHTQLNSVLNSSRTYLQDA------VITMRDGRYCLPVKAEHKNQVP-GMVHDQSAT 216
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G+T F+EP + NN L E E +L L++++ + + + +D
Sbjct: 217 GSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMALSSQLVPYTETLAENLSILARLDFI 276
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
FA+A ++ + P +++ + INI+ +HPLL +P K
Sbjct: 277 FAKASLSRHFNCTEPKFNNRRY------INIKDGRHPLL---------------DPKKV- 314
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
VPI+I + ++++TGPNTGGKT S+KT+GL +LM +AG
Sbjct: 315 -------------------VPINIYLGDSFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAG 355
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
L++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+G
Sbjct: 356 LHIPAFDGSELAVFDNVFADIGDEQSIEQSLSTFSAHMTNIVSILNEADSNSLCLFDELG 415
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP+EG ALA ++L +L + + TTHY++L + ENA EFS+ETLRPT
Sbjct: 416 AGTDPTEGAALAVAVLTFLHNMQCRTMATTHYSELKVFALTEPGVENACCEFSVETLRPT 475
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
YR+L G G SNA I+K +G II+ A++ + E++ +L +L E R +
Sbjct: 476 YRLLIGIPGKSNAFAISKKLGLPDYIIEDAKRHI-----EKEDAAFEDLLANLEESRITI 530
Query: 562 ESQARTAASLHAEIMDL 578
E + ++ AEI L
Sbjct: 531 EKEREELSAYKAEIAQL 547
>gi|315649009|ref|ZP_07902103.1| MutS2 family protein [Paenibacillus vortex V453]
gi|315275690|gb|EFU39044.1| MutS2 family protein [Paenibacillus vortex V453]
Length = 789
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 289/574 (50%), Gaps = 76/574 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE + LL T A + ++ P I DI L A G LSP E+ A T+
Sbjct: 40 LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLSPHELLATSNTIHG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKN-CNFLTE---LEEKIGFCIDCKLLIILDR 130
+ K+ A D +E+L N + ++E LE+ I CID +LD
Sbjct: 99 SRRI-KRFIAALHEDEQ--------IEILFNLSDLISEQKPLEDAIRLCID-DAAEVLDS 148
Query: 131 ASEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS +L IR E + R E L+S+++ + A++ Q LIT R R + +KA
Sbjct: 149 ASAELSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAE 203
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + S SGAT F+EP+ V NN E E IL LTA++ +
Sbjct: 204 YRSHF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQA 262
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ +D + ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 263 DLLSMDLDLIGQLDFIFAKARLAHVMRASLPRMNDRGYIKLRKG------RHPLI----- 311
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
P+ D VP+D+++ +++TGPNTGGKT
Sbjct: 312 -----------PM-------------------DQVVPLDVELGNTYTSIIVTGPNTGGKT 341
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ I
Sbjct: 342 VTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRI 401
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
L ++++SLVL+DE+G+GTDP+EG ALA SIL+++ R+G ++ TTHY++L +
Sbjct: 402 LGQMTQKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERK 460
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + +
Sbjct: 461 GVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEED 515
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
R + SL E R E + A + E+ +L
Sbjct: 516 QRVEHMIASLEENRHTAEMEREKAEQVRKEMEEL 549
>gi|418616514|ref|ZP_13179438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|420182831|ref|ZP_14688964.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|420214358|ref|ZP_14719637.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|420217164|ref|ZP_14722348.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
gi|374820592|gb|EHR84668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|394249294|gb|EJD94507.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|394283723|gb|EJE27888.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|394290520|gb|EJE34375.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
Length = 782
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|253577240|ref|ZP_04854559.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843354|gb|EES71383.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 788
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 279/559 (49%), Gaps = 66/559 (11%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE+ ++LL T A + ++ P I DI + A G L+P E+ + TL
Sbjct: 40 LEDVKRLLQATDEAFKVDRLKGAP-GFGGIVDITPAVKRARIGGTLNPHELLGIATTLEG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASE 133
+ + + E + PLL L + + LE+ I CID + +LD AS
Sbjct: 99 SRRIKRYIATMHE------EHEVPLLYHLSDTLSDQKPLEDAIKRCID-ESAEVLDSASP 151
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+L IR E + R E LD++++ + + LIT R R + +KA ++
Sbjct: 152 ELATIRRELRSGEVRIREKLDAMIRSASVSKM----LQDQLITIRGDRFVIPVKAEYRAH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S SGAT F+EP+ V NN E E IL LTA + + +
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVGEQAELLL 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
Y D + ++D FA+A A+ + G P ++ + + +HPL+
Sbjct: 267 YDGDVLGQLDFIFAKARLARELKGTLPRMNDRGFIKLKKG------RHPLI--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P +D VPID+++ + +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------ADQVVPIDVELGNQYTTIIVTGPNTGGKTVTLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL SLM+ +GL++PA++ +L FD I ADIGD QS+EQ+LSTFS H++ I+ IL +
Sbjct: 346 TIGLLSLMAMSGLFVPAEDGSQLCVFDAIYADIGDEQSIEQSLSTFSSHMTNIISILRQM 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ +SLVL+DE+G+GTDP+EG ALA +IL+++ V TTH+++L + NA
Sbjct: 406 TPKSLVLLDELGAGTDPAEGSALAIAILEHIHSLGCRMVATTHFSELKAYAYERKGVINA 465
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF + TL PTYR+L G G SNA IA+ +G +I++ A+ V + R
Sbjct: 466 SMEFDVATLSPTYRLLVGIPGRSNAFAIAERLGLPERILEYARGEV-----TEEDMRVEN 520
Query: 550 LYQSLMEERRKLESQARTA 568
+ SL + R E + TA
Sbjct: 521 MIASLEQNRLGAEQERETA 539
>gi|418325075|ref|ZP_12936285.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|420185530|ref|ZP_14691622.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
gi|365228981|gb|EHM70153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|394254516|gb|EJD99485.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
Length = 782
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|418576544|ref|ZP_13140678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324965|gb|EHY92109.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 782
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 264/500 (52%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +LS SE+ ++R ++ + N +K L+ + Y L
Sbjct: 65 LSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQ-IQNQYKTFYNNL-LNEEETINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ ++ L++L + I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DRMEQLPVLSDLYQSI--HQKCDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE +
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMS 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E ILS LT E+A+ E + + + ++ +ID A+A +A + G
Sbjct: 236 NQISRLKNDEAIERERILSALTVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + D ++ + HPLL ++ +N+ D+E
Sbjct: 295 PQFTK------DRTVYLPKAFHPLLDKQTV------VANTIEFAQDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHDTTKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++ + L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDHVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G + K+IQ+A+ ++
Sbjct: 494 DISKKLGLNMKVIQKAKSMI 513
>gi|251810592|ref|ZP_04825065.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876408|ref|ZP_06285275.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|417913383|ref|ZP_12557050.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|418624906|ref|ZP_13187566.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|420172837|ref|ZP_14679335.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|420198524|ref|ZP_14704232.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|420226953|ref|ZP_14731726.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|421607338|ref|ZP_16048584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
gi|251805752|gb|EES58409.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295433|gb|EFA87960.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|341655665|gb|EGS79389.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|374826171|gb|EHR90079.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|394241514|gb|EJD86928.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|394264219|gb|EJE08915.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|394297454|gb|EJE41051.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|406657130|gb|EKC83523.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
Length = 782
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|420210593|ref|ZP_14716016.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
gi|394276044|gb|EJE20400.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
Length = 782
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKGTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|291087888|ref|ZP_06347777.2| MutS2 protein [Clostridium sp. M62/1]
gi|291073610|gb|EFE10974.1| MutS2 family protein [Clostridium sp. M62/1]
Length = 818
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 274/557 (49%), Gaps = 65/557 (11%)
Query: 27 TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLTEA 85
T A + Q L ++DI L G L+ E+ AV L A E
Sbjct: 53 TDAVTRVRQKGSLSFGGLKDITDSLKRLEIGSSLNIVELLAVSSVLTVAARAKSYGRREE 112
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 143
+EL DSL LLE L N TE++ CI + + D AS L +R + K
Sbjct: 113 SELPDDSLDEMFRLLEPLTPVN--TEIKR----CILSEDEVS-DDASPGLRQVRRQMKVI 165
Query: 144 --RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
R L+S+L + A +IT R R C+ +KA HK +P G+ + S++
Sbjct: 166 NDRIHTQLNSVLNSSRTYLQDA------VITMRDGRYCLPVKAEHKNQVP-GMVHDQSAT 218
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G+T F+EP + NN L E E +L L++++ + + + +D
Sbjct: 219 GSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMALSSQLVPYTETLAENLSILARLDFI 278
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
FA+A ++ + P +++ + INI+ +HPLL +P K
Sbjct: 279 FAKASLSRHFNCTEPKFNNRRY------INIKDGRHPLL---------------DPKKV- 316
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
VPI+I + ++++TGPNTGGKT S+KT+GL +LM +AG
Sbjct: 317 -------------------VPINIYLGDSFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAG 357
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
L++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+G
Sbjct: 358 LHIPAFDGSELAVFDNVFADIGDEQSIEQSLSTFSAHMTNIVSILNEADSNSLCLFDELG 417
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP+EG ALA ++L +L + + TTHY++L + ENA EFS+ETLRPT
Sbjct: 418 AGTDPTEGAALAVAVLTFLHNMQCRTMATTHYSELKVFALTEPGVENACCEFSVETLRPT 477
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
YR+L G G SNA I+K +G II+ A++ + E++ +L +L E R +
Sbjct: 478 YRLLIGIPGKSNAFAISKKLGLPDYIIEDAKRHI-----EKEDAAFEDLLANLEESRITI 532
Query: 562 ESQARTAASLHAEIMDL 578
E + ++ AEI L
Sbjct: 533 EKEREELSAYKAEIAQL 549
>gi|313884242|ref|ZP_07818008.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
gi|312620689|gb|EFR32112.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
Length = 785
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 274/547 (50%), Gaps = 75/547 (13%)
Query: 40 DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
DL+T+E A+S LLS ++I + R L ++ K+L A L+G L L
Sbjct: 39 DLATVETWQAETEQALS--LLSQNQIIPIPR-LNDLSGAIKRLQVGASLNGKELADVGKL 95
Query: 100 LELLKNC-NFLTELE-------------EKIGFCIDCKLLI---------ILDRASEDLE 136
L +K +F + E E+ DC +I +L AS +L
Sbjct: 96 LSSVKQVHDFYAKQEADNRTYPALYAWIERSIVLKDCIAMIGEAISEEGDVLSSASTELA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR +++ E + + L ++ A + LIT R +R + +KA HK + G
Sbjct: 156 RIRRAQQQTEEAVRNQLNQILKN--NASALSDTLITIRNNRYVLPVKADHKSQIK-GTVH 212
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SS+G T ++EP+ NN L + E E IL L+ ++ +I+ +
Sbjct: 213 DQSSTGQTLYIEPRSVETLNNRRSHLQSEENNEIAQILMDLSGQLMPYYEDIRQNQYIIG 272
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D +RA + + + V P +S HVS + +HPLL +
Sbjct: 273 QLDYIQSRASYGRQLQAVRPKVSPDRHVSLIQA------RHPLL---------------D 311
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P K V N +I + + R ++ITGPNTGGKT +KTLG+ L
Sbjct: 312 P-KQVVAN-------------------NIIIGQDYRTLIITGPNTGGKTILLKTLGILHL 351
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M +AGL++PA+ ++ FD + ADIGD QS+EQ+LSTFSGH++ +DIL+ + +SL+L
Sbjct: 352 MGQAGLHIPAQKGSQIGLFDQVFADIGDEQSIEQSLSTFSGHMTNTIDILKHATYQSLLL 411
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+GSGTDP EG ALAT+IL YL + TTHY +L + NA+ EF+ E
Sbjct: 412 FDELGSGTDPQEGAALATAILDYLTGAGMTTMATTHYPELKVYAHEAPHTINASMEFNAE 471
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNAL I++ +G I+++A++ V + +E+ +L
Sbjct: 472 TLAPTYRLLIGIPGRSNALEISQRLGLPDYILEKARQGV-----SQDSQSINEMVANLET 526
Query: 557 ERRKLES 563
ERR+LE+
Sbjct: 527 ERRRLEA 533
>gi|445059987|ref|YP_007385391.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
gi|443426044|gb|AGC90947.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
Length = 782
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 264/500 (52%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + +A ++ + G +L+ +E+ A++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLTKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ LT+L + I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVK-- 178
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+Q+ + D ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 179 -SQVNRKKLSD-AIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT+++A E + L + ++ +D A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P ++ V ++ HPLL + +N+ D+E
Sbjct: 295 PTFHNERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|227524346|ref|ZP_03954395.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
gi|227088577|gb|EEI23889.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
Length = 788
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 247/491 (50%), Gaps = 61/491 (12%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R +R +N+ + D + + +++ +
Sbjct: 80 IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ I+ I LD AS +L IR R ++ S + K + G K
Sbjct: 131 PEITKRMVQSINEDGSI-LDTASSELRTIRRTINRTQNDIRSRIGK-----YLKGSDSKY 184
Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
L IT R R + I+A +K GI + S+SG T ++EP VE NN R +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E AEE IL+ LT I E+ M+ V ++D A+A FA + V P +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EIS 297
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
D+ +N+ +HPL+ D V DI
Sbjct: 298 RDNVVNLRQARHPLI-----------------------------------ARDKVVANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ E R ++ITGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD
Sbjct: 323 QIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+E NLSTFS H+ I+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ +
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L + NA+ EF +ETLRPTYR L G G SNALNIA +G +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502
Query: 526 KIIQRAQKLVE 536
II++A+ +
Sbjct: 503 GIIEKARAFTD 513
>gi|317129869|ref|YP_004096151.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
gi|315474817|gb|ADU31420.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
Length = 788
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 269/524 (51%), Gaps = 65/524 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E +QK + + L + PL I DI + A G L+ E+ V T+ +
Sbjct: 43 IEHAQKSTYEGAKVLRLKGQAPL--GGIRDIRASVKRAKIGGALNEIELLDVSSTIYG-S 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+K EA D L + + EL +N LT++E I ID + LD AS L
Sbjct: 100 RRFKSFVEAMIEDEVEL---TIIPELAENIVPLTDVERDIKQAIDENGEV-LDSASPALR 155
Query: 137 LIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R ++ R+ E+ L+S+ + + + + GI IT R R + +K ++
Sbjct: 156 TLR-QQIRSYESSVRSKLESITRSSSGRKMLSDGI----ITIRNDRYVIPVKQEYRGHF- 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNM--EVRLS-NSEIAEETAILSLLTAEIAKSEREI 248
G+ + S+SGAT F+EP VE NN E R+ EI+ LS+L +E+A+ E+
Sbjct: 210 GGMVHDQSASGATLFIEPSSVVEINNQLREARMKEKQEISRILLALSVLVSEVAE---EL 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+++ + EID FA+A ++ + G P L+ D I++ +HPL+
Sbjct: 267 LTIVEVMSEIDFIFAKALYSLEIGGTQPKLNE------DGYIHMAKARHPLI-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
D VPIDI++ E +VITGPNTGGKT ++
Sbjct: 313 ---------------------------AKDEIVPIDIEIGKEYSSLVITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM ++GL +P + F I ADIGD QS+EQ+LSTFS H++ IVDIL+
Sbjct: 346 KTVGLLTLMVQSGLQIPCEEGSSAAVFQHIFADIGDEQSIEQSLSTFSSHMTNIVDILKH 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V SLVL DE+G+GTDP+EG ALA SIL Y+ + + TTHY++L N
Sbjct: 406 VDHRSLVLFDELGAGTDPTEGAALAISILDYVYNVGAKVIATTHYSELKGYAYNREGVMN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
A+ EF +ETLRPTYR+L G G SNA I++ +G II+ A+
Sbjct: 466 ASVEFDVETLRPTYRLLIGVPGRSNAFAISRRLGLSDTIIEDAK 509
>gi|352684296|ref|YP_004896281.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
gi|350278951|gb|AEQ22141.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
Length = 790
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 282/564 (50%), Gaps = 67/564 (11%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE + +T+ A+ ++ + + + L I DI+G++ G LL P E A++ + +
Sbjct: 40 FEEVKLSQEETAEAVRILDEGRRIPLGGITDISGLVKRTRVGSLLDPEEFKAIQDAISGM 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
++ L E +E +L RYS L + + L +++ +D K I D AS L
Sbjct: 100 LDLKAFLKEVSET-APALVRYSDEL------HDFSRLSKQLSSVLDEKG-NIKDTASVKL 151
Query: 136 ELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R R R + L LL Q + L+T R R + IK ++ P
Sbjct: 152 SGLRTGILVARNRVKDKLSDLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP 207
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + SSSGAT F+EP V NN + E AE IL LT+ + I
Sbjct: 208 -GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAEVERILRTLTSHVGAEADHILES 266
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ V ++DL A+A +A+ + P++ H+ ++G +HPLL S+
Sbjct: 267 LAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI-----VKG-RHPLLEQESI------ 314
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VP+DI++ + ++ITGPNTGGKT ++KT+
Sbjct: 315 -----------------------------VPLDIELGQDFTTLLITGPNTGGKTVALKTV 345
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL+LPA+ P F + ADIGD QS+EQ+LSTFSGH+ ++ I+ +
Sbjct: 346 GLFALMAQAGLFLPAEE-AIFPVFSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATD 404
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
LVL+DE+ GTDP+EG ALA +++++ L ++TTHY++L + +NA+
Sbjct: 405 RDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIMTTHYSELKTFAYEHEGMQNASV 464
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-L 550
EF ETLRPTYR+L G G SNA I++ +G I+ A+ + ++H E +
Sbjct: 465 EFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILDEARTFIN------ERHSNMERV 518
Query: 551 YQSLMEERRKLESQARTAASLHAE 574
Q+L ERR+ ES+ +L E
Sbjct: 519 LQNLEGERREYESRKDEIETLRRE 542
>gi|418069516|ref|ZP_12706793.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
gi|357536047|gb|EHJ20078.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
Length = 785
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 255/494 (51%), Gaps = 48/494 (9%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L L+ EI + R LRA V + D+ L ++
Sbjct: 68 LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 124 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 182 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 241 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 294
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 295 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 320 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRVFEEIFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 380 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 440 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 499
Query: 524 DRKIIQRAQKLVER 537
D II +A+ LV++
Sbjct: 500 DEDIITQARGLVDQ 513
>gi|224476251|ref|YP_002633857.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus carnosus subsp. carnosus TM300]
gi|254766600|sp|B9DPU2.1|MUTS2_STACT RecName: Full=MutS2 protein
gi|222420858|emb|CAL27672.1| MutS2-like protein [Staphylococcus carnosus subsp. carnosus TM300]
Length = 782
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 276/553 (49%), Gaps = 68/553 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R ++ V N +K L+ + Y L
Sbjct: 65 LSGLTEVKPLIHRAKIGSILNVRELNQIKRLIQ-VQNQYKTFYSQL-LEEEEAINYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR+ +R +NLD ++K
Sbjct: 123 ERMAQLPILTDLYQEI--HQKCDAYDLFDDASHELQSIRSRIHSTSQRIKQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + +IT R R + +KA ++ +GI + SSSG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSAVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E ILS+L+ E+A +E + + + V+ +ID A+A + Q + G
Sbjct: 236 NKISRLRNDEKVEVERILSVLSGEVA-AEADACLIAESVMGQIDFLTAKARYGQSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + +V + HPLL + +N+ D++
Sbjct: 295 PEFTEERNVYLPKAF------HPLL------DRATVVANTIEFAEDIQ------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +PA + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
D + DIGD QS+EQ+LSTFS H+ IV+IL+ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 DNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL +++ L + TTHY +L NA+ EF + L PTY++L G G SNA
Sbjct: 434 ILDHVQKLGSLVMATTHYPELKAYSYNREGVMNASVEFDVNILSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTA 568
I+ +G II+ A+ L+ + + + + SL +K+E Q R A
Sbjct: 494 EISSKLGLSGNIIREAKSLI-----GQDEQEINNMIASLETNAKKVEDQRIELDRLLREA 548
Query: 569 ASLHAEIMDLYRE 581
+H ++ Y +
Sbjct: 549 KQVHGDLNKKYEQ 561
>gi|392423579|ref|YP_006464573.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
gi|391353542|gb|AFM39241.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
Length = 788
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 278/552 (50%), Gaps = 69/552 (12%)
Query: 18 EESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE L +T +++ PL + ++I L + G ++ E+ +R TL+
Sbjct: 43 EEVHFGLQETDEGKNLIRGNPLFSVRGAKEIRPYLERCLLGGVIHGEELLEIRDTLQ--- 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASED 134
V ++L + + +S + + L E+ + LE++I CI D K + D AS +
Sbjct: 100 -VGRRLKQFFQ---ESQEEFPRLWEVSLSIEPQKALEDEISRCIAEDGK---VADNASPE 152
Query: 135 L-ELIRA---ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L EL RA + R E+L+ L+ A Q + P+IT+R R + IK ++
Sbjct: 153 LAELRRAIYRLQNRIRESLEGTLRNPAYQKM----LQDPIITQRSDRYVIPIKQEYRGAF 208
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P GI + S+SGAT F+EP V+ N + E E IL +L+A++ +
Sbjct: 209 P-GIVHDQSASGATLFIEPMPVVQLGNELREVVLKEQREVQRILQMLSAQVETRAETVAD 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L + + ++D A+A + M+ P L + + + +HPL+ G
Sbjct: 268 LHEALAKLDFVLAKANLSVSMNAGAPELVEKQQLKLIQA------RHPLIGGKV------ 315
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VP+ +++ +VITGPNTGGKT ++K
Sbjct: 316 ------------------------------VPLSVELGIGFDTLVITGPNTGGKTVALKV 345
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL + M+++GL++PA+++ + F I ADIGD QS+EQ+LSTFSGH+ IV+I++
Sbjct: 346 IGLMAAMTQSGLHIPAESNSSMGVFSQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRSD 405
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL+DE+G+GTDP+EG ALA IL L R V TTHY L + R +NA+
Sbjct: 406 ERSLVLLDEVGAGTDPTEGAALAMGILAELHSRGCRTVSTTHYGALKTFAYETPRVKNAS 465
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ETLRPTYR+L G G SNA IA+ +G +++RA V ER+ ++L
Sbjct: 466 VEFDTETLRPTYRLLIGIPGKSNAFTIARRLGLSEGVLERANTFV----TEREMQ-VADL 520
Query: 551 YQSLMEERRKLE 562
++L E R++E
Sbjct: 521 IENLGETHREIE 532
>gi|227498526|ref|ZP_03928670.1| mutS2 family protein [Acidaminococcus sp. D21]
gi|226903982|gb|EEH89900.1| mutS2 family protein [Acidaminococcus sp. D21]
Length = 777
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 282/564 (50%), Gaps = 67/564 (11%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE + +T+ A+ ++ + + + L I DI+G++ G LL P E A++ + +
Sbjct: 40 FEEVKLSQEETAEAVRILDEGRRIPLGGITDISGLVKRTRVGSLLDPEEFKAIQDAISGM 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
++ L E +E +L RYS L + + L +++ +D K I D AS L
Sbjct: 100 LDLKAFLKEVSET-APALVRYSDEL------HDFSRLSKQLSSVLDEKG-NIKDTASVKL 151
Query: 136 ELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R R R + L LL Q + L+T R R + IK ++ P
Sbjct: 152 SGLRTGILVARNRVKDKLSDLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP 207
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + SSSGAT F+EP V NN + E AE IL LT+ + I
Sbjct: 208 -GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAEVERILRTLTSHVGAEADHILES 266
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ V ++DL A+A +A+ + P++ H+ ++G +HPLL S+
Sbjct: 267 LAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI-----VKG-RHPLLEQESI------ 314
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VP+DI++ + ++ITGPNTGGKT ++KT+
Sbjct: 315 -----------------------------VPLDIELGQDFTTLLITGPNTGGKTVALKTV 345
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL+LPA+ P F + ADIGD QS+EQ+LSTFSGH+ ++ I+ +
Sbjct: 346 GLFALMAQAGLFLPAE-EAIFPVFSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATD 404
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
LVL+DE+ GTDP+EG ALA +++++ L ++TTHY++L + +NA+
Sbjct: 405 RDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIMTTHYSELKTFAYEHEGMQNASV 464
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-L 550
EF ETLRPTYR+L G G SNA I++ +G I+ A+ + ++H E +
Sbjct: 465 EFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILDEARTFIN------ERHSNMERV 518
Query: 551 YQSLMEERRKLESQARTAASLHAE 574
Q+L ERR+ ES+ +L E
Sbjct: 519 LQNLEGERREYESRKDEIETLRRE 542
>gi|335047142|ref|ZP_08540163.1| recombination and DNA strand exchange inhibitor protein [Parvimonas
sp. oral taxon 110 str. F0139]
gi|333760950|gb|EGL38505.1| recombination and DNA strand exchange inhibitor protein [Parvimonas
sp. oral taxon 110 str. F0139]
Length = 629
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 287/579 (49%), Gaps = 84/579 (14%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQL 59
+G ++ ++I +L E Q+LL++T A + L +S I+D+ GQ
Sbjct: 26 IGKKTIKNSEI--SSNLIEVQRLLDETDEAYRFIIKHRLPGISNIDDLEEDFKLLEIGQY 83
Query: 60 LSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
SP + V + L R + N+ + E++E + + EL+ + N T+LE+ I
Sbjct: 84 FSPKNLLEVWKLLNTSRFLKNIISE-EESSE--------FKNIFELINSLNIATQLEKDI 134
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRR 175
I + I D AS DL+ IR R +++ + L++ K+ I + + L T R
Sbjct: 135 EMSIISENEI-SDDASSDLKRIR----RMIKSKNDLIRDKLNQLISTSDKLMDNLYTLRD 189
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R V +++ K GI + S+SG T F+EP V+ NN L EI EE I
Sbjct: 190 GRYVVPVRSEFKNSFK-GIVHDQSASGQTVFIEPMFVVDLNN---DLKKLEIDEEKEIER 245
Query: 236 LLTAEIAKSEREIKYL------MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+L IA S R ++ L + + +ID F+R A M+ + PI++++ +S S+
Sbjct: 246 IL---IAFSSRVLEILPELISNLSVIAKIDFIFSRGKLAYDMEAIKPIINNRGIISLQSA 302
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+HPL+ D VPIDI +
Sbjct: 303 ------RHPLI-----------------------------------DRDKVVPIDISLGN 321
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+VITGPNTGGKT ++KT+G+ +LM++ GL +P ++ + FD + ADIGD QS+E
Sbjct: 322 SFNTLVITGPNTGGKTVTLKTVGILTLMTQYGLMIPCADNSEVAVFDELFADIGDEQSIE 381
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H+ I++I++ SL+L DE+GSGTDP EG L+ SIL Y R +
Sbjct: 382 QSLSTFSSHMKNIIEIIKNAKENSLILFDELGSGTDPEEGSGLSISILNYFLGRNIRTIA 441
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY+ L +NAA EF +E L PTY+++ G +G SNA I+K +G D I
Sbjct: 442 TTHYSQLKMYAMSTENVQNAAMEFDVEKLEPTYKLIIGISGKSNAFEISKKLGLDESFIV 501
Query: 530 RAQKLV-------ERLRPERQQHRKSELYQSLMEERRKL 561
A+K + ++L RK Y+ L+ E+R++
Sbjct: 502 NAKKFISNNELSFDKLVSNVDNRRKE--YEDLIIEQREI 538
>gi|225571366|ref|ZP_03780362.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
15053]
gi|225159842|gb|EEG72461.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
15053]
Length = 791
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 217/413 (52%), Gaps = 54/413 (13%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA H+ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKAEHRGHV-QGLIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+AE A+ + I+ + E+D FA+ A M+ P+ +++
Sbjct: 245 EIQVILARLSAETAEHIQTIRTNCTVLTELDFIFAKGSLALDMNASMPLFNTEGR----- 299
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL + TV VPI I +
Sbjct: 300 -IHIREGRHPLL------------------------DKHTV-----------VPITITLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DTFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELSVFHDVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SL+L DE+G+GTDP+EG ALA SIL +L +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDEHSLILFDELGAGTDPTEGAALAISILNHLHERGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALTTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPSYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ A+ R + E ++ L+ + LE+ RT AEI RE
Sbjct: 504 EEAK---------RHLSEQDESFEDLLAD---LEANRRTIEKEQAEIASYRRE 544
>gi|323142314|ref|ZP_08077146.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
gi|322413198|gb|EFY04085.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
Length = 793
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 282/567 (49%), Gaps = 74/567 (13%)
Query: 21 QKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++L +T+ AL ++ + + +I + A G +L P E+ ++ T++A ++
Sbjct: 44 KRLQEETAEALRILDEGRRFPFGGAFNITADVKRAELGSVLEPEELQHIQTTVQAFASMK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ ++++ L E + LE++IG ID + I D AS L +R
Sbjct: 104 -------DFTAENVETAPNLAEYGAELTQFSRLEKQIGSAID-EYGEIKDNASPKLGGLR 155
Query: 140 AE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
A + R E LDS+L Q + I +T R R + +K +K P GI
Sbjct: 156 AAIQIAKNRVKEKLDSILHDPNNQKYFMDNI----VTMRGDRYVIPVKQEYKMNFP-GIV 210
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S +GAT F+EP V NN R E E IL LT + + + ++
Sbjct: 211 HDQSGTGATLFIEPLAVVNLNNDIKRYVAEEHEEMERILRQLTQNVGAEAKALLASLEIF 270
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ ARA AQ V P+L + I +HPLL
Sbjct: 271 TTLDVICARALLAQEQHAVRPMLV------LSGGVEIAQGRHPLL--------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
P D VP+++++ + +++ITGPNTGGKT ++K +GL +
Sbjct: 310 -P-------------------KDTVVPLNVQLGDKFTMLLITGPNTGGKTVALKAVGLFA 349
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++ GL++PA + ++P F + ADIGD QS+EQ+LSTFS H++ ++ IL V LV
Sbjct: 350 LMAQIGLFIPASS-AKMPVFRAVYADIGDEQSIEQSLSTFSAHMTNLIRILNEVKAGDLV 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
LIDEI +GTDP+EG ALA ++L++L ++ L +VTTHY++L ENA+ EF
Sbjct: 409 LIDEICAGTDPNEGAALAMAMLEHLHEQGVLTMVTTHYSELKTFAYGHEGMENASVEFDP 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSL 554
+LRPTYR+L G G SNA NI++ +G II+ A +L+ Q+H E + Q L
Sbjct: 469 VSLRPTYRLLMGVPGSSNAFNISRRLGLAEDIIKNAGELL------NQEHVHMENVLQEL 522
Query: 555 MEERRKLESQARTAASLHAEIMDLYRE 581
ERR+ ES ++ EI DL RE
Sbjct: 523 DSERRRYESGSK-------EIEDLRRE 542
>gi|188589227|ref|YP_001921019.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188499508|gb|ACD52644.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 635
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 293/586 (50%), Gaps = 78/586 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
+G ++ K IP +L++ ++LN+TS ++ S + L I DI +LN G +
Sbjct: 26 LGKNLIDKI-IP-STNLKQVNRMLNETSEGRKLIDASYHMPLEGIFDINPLLNKMEKGAV 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGF 118
L PSE+ + LR V +L Q Y+P L +N L +E++I
Sbjct: 84 LEPSELVTIGDFLRGCRKV--------KLFIKDKQGYAPTLSSYGENITELQYVEDEISM 135
Query: 119 CIDCKLLIILDRASEDLELIR-----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
I K +I A+++L+ IR E K N E L+ +K + + + + + +++
Sbjct: 136 SI--KGTVIDSNATKELKKIRKHIDLCEGKIN-EKLEKFIKSQSNREY----LQEAFVSQ 188
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R V IKAS+K + I + VSS G T FMEP ++ L E EE I
Sbjct: 189 RNGRYTVPIKASYKNQVSGSI-VEVSSKGNTVFMEPNIISKYTVELASLRGEESIEEYKI 247
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L+ LT I RE+K ++ + E D+ A+A +++ + GV P L+++ INI
Sbjct: 248 LATLTEMIFSRIRELKVNVEVISEYDMILAKAKYSKDIKGVKPKLNNRGF------INIV 301
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
++PL+ S +P+++K+ + R
Sbjct: 302 DGRYPLIKNS-------------------------------------IPLNLKIGEKYRS 324
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
++ITGPN GGKT +KT+G+ ++ ++G ++ A + + FD I DIGD QS+E +LS
Sbjct: 325 LIITGPNAGGKTVVLKTVGILTMAIQSGFHISANENSEMAVFDNIFVDIGDDQSVENSLS 384
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H+ + IL ++ +L+L DEIGSGT+P+EG ALA +IL+ + + V +THY
Sbjct: 385 TFSSHVGNLSRILRESTKNTLLLFDEIGSGTEPNEGAALAIAILEEFYKKGCITVASTHY 444
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
++ FENAA EF +TL P YR+ G +G+SNAL IAK +G D II R+++
Sbjct: 445 GEIKNFSYNHPHFENAAMEFKKDTLEPMYRLNIGMSGESNALYIAKKMGIDDVIIDRSKR 504
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+ E +++ R+ L+++ S++ I++ Y
Sbjct: 505 YF----------KSKEYNYEIIDSRKLLKNKTENENSVYENIINEY 540
>gi|304385233|ref|ZP_07367578.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
gi|304328440|gb|EFL95661.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
Length = 786
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 255/494 (51%), Gaps = 48/494 (9%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L L+ EI + R LRA V + D+ L ++
Sbjct: 69 LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 124
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 125 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 182
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 183 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 241
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 242 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 295
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 296 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 320
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 321 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIG 380
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 381 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 440
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 441 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 500
Query: 524 DRKIIQRAQKLVER 537
D II +A+ LV++
Sbjct: 501 DEDIITQARGLVDQ 514
>gi|354580077|ref|ZP_08998982.1| MutS2 family protein [Paenibacillus lactis 154]
gi|353202508|gb|EHB67957.1| MutS2 family protein [Paenibacillus lactis 154]
Length = 789
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 287/579 (49%), Gaps = 75/579 (12%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE+ + LL T A + ++ P S + DI L A G L+P E+ A T+
Sbjct: 40 LEDVKHLLAATDQAYTVDRLKGTP-SFSGVTDINDALKRARIGGTLNPHELLATANTILG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ + + + P+ L + ++E LE+ I CID + LD A
Sbjct: 99 SRRIKRFIA--------GIHEDEPIDILFHLSDLISEQKPLEDAIRACIDDSAEV-LDTA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E L+S+++ + A++ Q LIT R R + +KA +
Sbjct: 150 SAELAQIRRELRNGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA++ +
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRIREEREIEVILQKLTAQVGEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ +D V ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 264 VLAIDVDLVGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
P+ D VP+D+++ +++TGPNTGGKT
Sbjct: 312 ----------PM-------------------DQVVPLDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ +SLVL+DE+G+GTDP+EG ALA +IL+++ + TTHY++L +
Sbjct: 403 TQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHIHSMGCRMIATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + + R
Sbjct: 463 INASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDL---YRED 582
+ SL E R E + A + E+ +L +RE+
Sbjct: 518 VEHMIASLEENRHTAEVEREKAEQVRKEMEELRARHREE 556
>gi|227513131|ref|ZP_03943180.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
gi|227083706|gb|EEI19018.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
Length = 788
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 247/491 (50%), Gaps = 61/491 (12%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R +R +N+ + D + + +++ +
Sbjct: 80 IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ I+ I LD AS +L IR R ++ S + K + G K
Sbjct: 131 PEITKRMVQSINEDGSI-LDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKY 184
Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
L IT R R + I+A +K GI + S+SG T ++EP VE NN R +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E AEE IL+ LT I E+ M+ V ++D A+A FA + V P +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EIS 297
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
D+ +N+ +HPL+ + V DI
Sbjct: 298 RDNVVNLRQARHPLIARGKV-----------------------------------VANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ E R ++ITGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD
Sbjct: 323 QIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+E NLSTFS H+ I+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ +
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L + NA+ EF +ETLRPTYR L G G SNALNIA +G +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502
Query: 526 KIIQRAQKLVE 536
II++A+ +
Sbjct: 503 GIIEKARAFTD 513
>gi|20808111|ref|NP_623282.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter tengcongensis MB4]
gi|254479026|ref|ZP_05092382.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
gi|23821879|sp|Q8R9D0.1|MUTS2_THETN RecName: Full=MutS2 protein
gi|20516697|gb|AAM24886.1| MutS-like ATPases involved in mismatch repair, family 1
[Thermoanaerobacter tengcongensis MB4]
gi|214035022|gb|EEB75740.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
Length = 790
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 241/439 (54%), Gaps = 53/439 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS L+ IR ++ E + S L + + + + +P+IT R+ R V +K +
Sbjct: 147 ISDEASPVLKAIRRQKASINEKIKSTLNSIIST--RQKELQEPIITMRQGRYVVPVKQEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ + GI + SS+GAT F+EP V+ NN L E E IL L+ E+ K+
Sbjct: 205 RNVFK-GIIHDQSSTGATLFIEPIQVVDLNNELRELELKEQKEIERILFELSQEVKKNAE 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
I ++ V E+D FA+A ++ + P L++ +V N++ +HPL+
Sbjct: 264 AIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYV------NLKKARHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VPIDI + E +VITGPNTGGKT
Sbjct: 312 ---------DPEKV--------------------VPIDIHIGREFTTLVITGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM+ AG+ +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 TLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V++ SLVL+DE+G+GTDP EG ALA SIL +L + TTHY++L K
Sbjct: 403 KKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGV 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
ENA+ EF +ETLRPTYR++ G G SNA I++ +G +II+ A+ + E +R E
Sbjct: 463 ENASVEFDVETLRPTYRLIIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFE--- 519
Query: 545 HRKSELYQSLMEERRKLES 563
++ + + E+R+ LE+
Sbjct: 520 ----DVIKDVEEKRKDLEN 534
>gi|270290964|ref|ZP_06197187.1| MutS2 protein [Pediococcus acidilactici 7_4]
gi|270280360|gb|EFA26195.1| MutS2 protein [Pediococcus acidilactici 7_4]
Length = 785
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 255/494 (51%), Gaps = 48/494 (9%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L L+ EI + R LRA V + D+ L ++
Sbjct: 68 LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 124 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 182 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 241 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 294
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 295 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 320 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 380 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 440 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 499
Query: 524 DRKIIQRAQKLVER 537
D II +A+ LV++
Sbjct: 500 DEDIITQARGLVDQ 513
>gi|402816098|ref|ZP_10865689.1| protein MutS2 [Paenibacillus alvei DSM 29]
gi|402506002|gb|EJW16526.1| protein MutS2 [Paenibacillus alvei DSM 29]
Length = 787
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 288/529 (54%), Gaps = 73/529 (13%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE ++ L T A+ + + + S + DI + A +LS +E+ + + A
Sbjct: 40 LEEVKRRLQATDEAMTIDRLKGGAPFSGVADIRPAVKRARINAMLSANELWEISVLIFAG 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSP---LLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
V + + +S+ +P ++EL + ++ ELE++I CID + + LD+AS
Sbjct: 100 RRVRRHI--------ESVHEDNPVPLMMELADSLSWQKELEDEIRRCIDEQGEV-LDQAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
+L R E + R E L+S+++ A+++ Q + LIT R R + +K+ ++
Sbjct: 151 SELAAARRELRIGEARIREKLESMIRSSNASKMLQ-----EQLITIRNDRYVIPVKSEYR 205
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V NN +L +++ EE I +L+ +
Sbjct: 206 GHY-GGIVHDQSSSGATLFIEPEAIVTLNN---KLRETKLKEEREIERILSQLTEHVGLQ 261
Query: 248 IKYLM---DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ L+ D + ++D FA+A A M P ++ + ++ I+G +HPL+
Sbjct: 262 VDLLLNDTDIMEQLDFIFAKARLAHEMKATLPRMNDRGYMKL-----IKG-RHPLI---- 311
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
D E VPID+++ + +++TGPNTGGK
Sbjct: 312 ----------------DREKV---------------VPIDVELGNDYTSIIVTGPNTGGK 340
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KT+GL SLMS +GL++PA++ ++ FD I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 341 TVSLKTMGLLSLMSMSGLFIPAQDGSQMCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIR 400
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKD 483
IL ++ +SLVL+DE+G+GTDP+EG ALA +IL+++ R+G +V TTHY++L +
Sbjct: 401 ILGEMTPKSLVLLDELGAGTDPAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYER 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
NA+ EF ++TLRPTYR+L G G SNA IA+ +G II+ A+
Sbjct: 460 KGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAERLGLPSSIIEHAR 508
>gi|419768706|ref|ZP_14294822.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-250]
gi|383359532|gb|EID36955.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-250]
Length = 694
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 259/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL ++ +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLLDKDTV------VANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|27467755|ref|NP_764392.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis ATCC 12228]
gi|293366874|ref|ZP_06613550.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656654|ref|ZP_12306337.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|417660105|ref|ZP_12309696.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|417909781|ref|ZP_12553514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|418603410|ref|ZP_13166795.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|418606840|ref|ZP_13170105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|418609778|ref|ZP_13172912.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|418628985|ref|ZP_13191501.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|418663768|ref|ZP_13225276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|419772619|ref|ZP_14298650.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|420202124|ref|ZP_14707719.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|420206519|ref|ZP_14712029.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|420210956|ref|ZP_14716345.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|420219527|ref|ZP_14724543.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|420222048|ref|ZP_14726973.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|420224910|ref|ZP_14729748.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|420229273|ref|ZP_14733979.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|420231637|ref|ZP_14736282.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
gi|38604826|sp|Q8CPL6.1|MUTS2_STAES RecName: Full=MutS2 protein
gi|27315299|gb|AAO04434.1|AE016746_224 MutS-like protein [Staphylococcus epidermidis ATCC 12228]
gi|291319175|gb|EFE59545.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329734429|gb|EGG70742.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|329736315|gb|EGG72587.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|341652390|gb|EGS76178.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|374406114|gb|EHQ77017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|374406846|gb|EHQ77724.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|374407579|gb|EHQ78432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|374411187|gb|EHQ81905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|374834979|gb|EHR98610.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|383359246|gb|EID36676.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|394270097|gb|EJE14620.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|394278358|gb|EJE22675.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|394282893|gb|EJE27075.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|394288952|gb|EJE32849.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|394290079|gb|EJE33949.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|394294313|gb|EJE37999.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|394299039|gb|EJE42590.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|394302179|gb|EJE45627.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
Length = 782
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|418411583|ref|ZP_12984850.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
gi|420167521|ref|ZP_14674174.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|394238147|gb|EJD83630.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|410892309|gb|EKS40103.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
Length = 782
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 253/499 (50%), Gaps = 54/499 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT ++ + + +ID A+A +A+ + G P
Sbjct: 236 NQISRLRNDEAVERERILTELTGLVSADSDALLVAESVMGQIDFLIAKARYARTIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
D +I + HPLL +N+ DVE
Sbjct: 296 TFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------- 330
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFE 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA +
Sbjct: 435 LDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFD 494
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I+K +G II +A+ ++
Sbjct: 495 ISKKLGLSLNIINKAKTMI 513
>gi|433655413|ref|YP_007299121.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293602|gb|AGB19424.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 786
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 268/523 (51%), Gaps = 56/523 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+L+++ K +++ + A++ + S + I ILN A L+ ++ + R L
Sbjct: 39 NLDKAAKEIDKVNEAVSFISSYGNMSFAFKKIDDILNKAKIKSTLNIGQLMTISRFLSLA 98
Query: 76 NNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
V L +E E + L+ Y+ L L+ +L E+I +++I D S+D
Sbjct: 99 GRVKSYLRSEKEESNYPLLREYNIRLTNLR------DLYERID-----RIVISEDELSDD 147
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPD 192
+ +R ++++ +K I + + P+IT R R V +K ++
Sbjct: 148 ASPALKDIRRQKAHINNKIKDTLNYIIASSSKELQDPIITIRNGRYVVPVKQEYRGTFK- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + SSSGAT F+EP VE NN +L E E ILS LT +I++ EI M
Sbjct: 207 GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEIHENM 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ E+D+ FA+A ++ + P+ ++ + IN++ +HPLL
Sbjct: 267 IALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL------------ 308
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
P D VPI + + +VITGPNTGGKT ++KT+G
Sbjct: 309 ----P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTLKTVG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+ +GL +P + +FD I DIGD QS+EQ+LSTFS H++ IV IL V+
Sbjct: 346 LLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNSVTSN 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA SIL +L + TTHY++L K+ ENA+ E
Sbjct: 406 SLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVENASVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
F +ETLRPTYR+ G G SNA I++ +G + +II A+ +
Sbjct: 466 FDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYI 508
>gi|70726818|ref|YP_253732.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus haemolyticus JCSC1435]
gi|82592981|sp|Q4L5E9.1|MUTS2_STAHJ RecName: Full=MutS2 protein
gi|68447542|dbj|BAE05126.1| MutS-like protein [Staphylococcus haemolyticus JCSC1435]
Length = 783
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 284/562 (50%), Gaps = 71/562 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ +++ A G +L+ +E+ V+R ++ V N +K + + + +Y L
Sbjct: 65 LSGLAKISPLIHRANIGGVLNVTELNLVKRLIQ-VQNQFKTFYNQLLEEDEQVVKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + L++L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 DKMNQLPILSDLFQEINEKCDTHDL--YDSASYELQGIRSKISSTNQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT +A +E + + + V+ +ID A+A +A+ + G
Sbjct: 237 NQISRLRNDEAVERERILTELTGMVA-AEADGCLIAESVMGQIDFLTAKARYARSIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D ++ + HPLL N + V + +
Sbjct: 296 PTFYK------DRTVYLPNAYHPLL-----------------------NKDTVVANTIEF 326
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 327 VDDI------------ETVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 375 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 435 ILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQ-----------KLVERLRP--ERQQHRKSELYQSLMEERR--- 559
+I++ +G II +A+ ++E L +R ++ EL + L E R+
Sbjct: 495 DISRKLGLSLGIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELDRLLKEARKTHD 554
Query: 560 KLESQARTAASLHAEIMDLYRE 581
LE Q S ++MD +E
Sbjct: 555 DLEHQYEQYKSYEKKLMDEAKE 576
>gi|327475223|gb|AEA77206.1| MutS2 [Exiguobacterium sp. EPVM]
Length = 784
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 189/603 (31%), Positives = 292/603 (48%), Gaps = 84/603 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
L L + D+ G + A G +LS SE+ AV + R V N ++KL E D + L R
Sbjct: 62 LPLGGLTDVRGEVKRAAIGSVLSTSELLAVAAVMYSGRQVKNFFEKLHE----DNEDL-R 116
Query: 96 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
L E + L E+E+ I ID + + D AS+ L +R + R+ E +D
Sbjct: 117 IPRLDEYAERLTKLIEVEQAIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRID 174
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEPQ 227
Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
V NN EVRL E AE ILS L+ + + +D + +D FA+ +
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVSDSVVINLDVLATLDFVFAKVAYG 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
+ P L+ + + +HP + P
Sbjct: 286 HELKATEPKLNDAREIKLKQA------RHPFI----------------P----------- 312
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D VPI +++ +VITGPNTGGKT ++KTLGL LM ++GLY+PA+
Sbjct: 313 --------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAEF 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
L FD I ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484
Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
G SNA I++ +G ++I +A + ++ L +Q R +L + L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINELEAAKQ--RAEQLEKELIVK 542
Query: 558 RRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSKVDFDAIPNIDQCKD 617
R LE + A+ A++ + RE T + R + AV + + + I + + ++
Sbjct: 543 RHDLEEE---QAAFEAKMTEFERERDTMYGEAEARAEKAVEQAKRQAN-EVIDRLKKLRE 598
Query: 618 KGI 620
+GI
Sbjct: 599 EGI 601
>gi|407477852|ref|YP_006791729.1| MutS2 protein [Exiguobacterium antarcticum B7]
gi|407061931|gb|AFS71121.1| MutS2 protein [Exiguobacterium antarcticum B7]
Length = 788
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 265/534 (49%), Gaps = 74/534 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
D+ + A G +LS SE+ AV + + V K E D L R L +
Sbjct: 70 DVRSEVKRAEIGSVLSTSELLAVADVVYSGRQV-KAFQERLHEDHPDL-RLPALDSRIDQ 127
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQI 160
L E+E+ I ID + + D AS+ L +R++ R++E +D +L+ + +
Sbjct: 128 ITKLVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRSKSKML 185
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--M 218
A ++T R R CV +K ++ GI + S+SGAT F+EP+ V NN
Sbjct: 186 SDA------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNEIQ 238
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
E RL E AE IL+ L+A + ++ +D + E+D A+A + + V P L
Sbjct: 239 EARLK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEPKL 296
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ H+ + +HP + P D
Sbjct: 297 NENRHIVLKEA------RHPFI----------------P-------------------DD 315
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI + + E +VITGPNTGGKT ++KT+GL LM ++GLY+PA + L FD I
Sbjct: 316 EVVPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAI 375
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQNLSTFS H++ IV ++ + SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 376 YADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILD 435
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
++ R TTHY++L NA+ EF +E+L PTYR+L G G SNA I+
Sbjct: 436 EVKRRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFEIS 495
Query: 519 KSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
K +G D ++I Q + ++ RL E + R L + L++E+++L
Sbjct: 496 KRLGLDDRVISAARDQVGSDAQSVETMIGRL--EEAKQRAETLERELLQEQKRL 547
>gi|333370261|ref|ZP_08462275.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332978201|gb|EGK14933.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 784
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 176/520 (33%), Positives = 263/520 (50%), Gaps = 56/520 (10%)
Query: 18 EESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E Q++L T+ A+ +++ + L L + DI L A G LL+ E+ V T A
Sbjct: 41 DEVQRMLQSTAEAIDLLRLKGNLSLEAVSDIHPALQRARIGGLLTSVELLRVAGTAGAEE 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V L E + D L L LK L I ID + D AS +L
Sbjct: 101 TVCSVL-EGMDPDETPLPLLRELSGQLKETRILAR---TIRGAIDEDGAVT-DDASPELG 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIKASHKYLLPD 192
IR RN+ L ++ + + K P+IT+R R + +K ++ +
Sbjct: 156 RIR----RNIRQLQGAIRTTLDEFLRHSQYQKMLQDPIITQRNDRYVIPVKQEYRGAV-R 210
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SG T F+EP+ V NN L E E IL LTAE+A +++ +
Sbjct: 211 GIVHDQSASGQTLFIEPQAVVNQNNRLRELELEEEREVERILGELTAEVADKADDLESNL 270
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ ++DL A+A + M G+ P V+ D I ++ +HPL+
Sbjct: 271 SVLTQLDLILAKARLGKRMKGIVP------GVNMDGFIRLKRARHPLI------------ 312
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
P+K VP D+++ E R +VITGPNTGGKT ++KT+G
Sbjct: 313 ----PMKE-------------------AVPNDVELGREQRAIVITGPNTGGKTVTLKTVG 349
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+++GL +PA+ L F + ADIGD QS+EQNLSTFS H++ IV IL+ +
Sbjct: 350 LLALMAQSGLPIPAEEESDLAIFTGVYADIGDEQSIEQNLSTFSSHMTNIVHILDSMDEN 409
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA S+L+ + ++ V TTHY +L NA+ E
Sbjct: 410 SLVLLDELGAGTDPTEGAALAISVLERVLEQGCRVVATTHYNELKLYAHAREGVINASVE 469
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
F +E+L PTYR+L G G SNA I++ +G ++IQ A+
Sbjct: 470 FDVESLSPTYRLLTGVPGRSNAFEISRRLGLPEEVIQAAK 509
>gi|261408901|ref|YP_003245142.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
gi|261285364|gb|ACX67335.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
Length = 789
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 285/570 (50%), Gaps = 68/570 (11%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE + LL T A + ++ P I DI L A G L+P E+ A T+
Sbjct: 40 LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLNPHELLATSNTIHG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K+ A D ++ L L + LE+ I CID + +LD AS +
Sbjct: 99 SRRI-KRFIAAIHED----EKIDILFNLSDLISEQKPLEDAIRLCID-ETAEVLDSASAE 152
Query: 135 LELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR E + R E L+S+++ + A++ Q LIT R R + +KA ++
Sbjct: 153 LSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S SGAT F+EP+ V NN E E IL LTA++ + +
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQAELLS 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 267 IDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRRG------RHPLI--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P +D VP+D+++ +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------TDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL +
Sbjct: 346 TIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQM 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFEN 488
+ +SLVL+DE+G+GTDP+EG ALA SIL+++ R+G ++ TTHY++L + N
Sbjct: 406 TPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVIN 464
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + + R
Sbjct: 465 ASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVE 519
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ SL E R E + A + E+ +L
Sbjct: 520 HMIASLEENRHTAEVEREKAEQVRKEMEEL 549
>gi|329927098|ref|ZP_08281454.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF5]
gi|328938675|gb|EGG35054.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF5]
Length = 637
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 285/570 (50%), Gaps = 68/570 (11%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE + LL T A + ++ P I DI L A G L+P E+ A T+
Sbjct: 40 LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLNPHELLATSNTIHG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K+ A D ++ L L + LE+ I CID + +LD AS +
Sbjct: 99 SRRI-KRFIAAIHED----EKIDILFNLSDLISEQKPLEDAIRLCID-ETAEVLDSASAE 152
Query: 135 LELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR E + R E L+S+++ + A++ Q LIT R R + +KA ++
Sbjct: 153 LSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S SGAT F+EP+ V NN E E IL LTA++ + +
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQAELLS 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 267 IDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRRG------RHPLI--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P +D VP+D+++ +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------TDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL +
Sbjct: 346 TIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQM 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFEN 488
+ +SLVL+DE+G+GTDP+EG ALA SIL+++ R+G ++ TTHY++L + N
Sbjct: 406 TPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVIN 464
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + + R
Sbjct: 465 ASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVE 519
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ SL E R E + A + E+ +L
Sbjct: 520 HMIASLEENRHTAEVEREKAEQVRKEMEEL 549
>gi|152976937|ref|YP_001376454.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cytotoxicus NVH 391-98]
gi|189030426|sp|A7GTK1.1|MUTS2_BACCN RecName: Full=MutS2 protein
gi|152025689|gb|ABS23459.1| MutS2 family protein [Bacillus cytotoxicus NVH 391-98]
Length = 786
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 271/548 (49%), Gaps = 66/548 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + K+ E +G L P+L
Sbjct: 65 LGGIFDIRSNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDIVDNGAQL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI + LD AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITGCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ + +D FA+A +A+ M
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAAEADIVLANVEVIANLDFIFAKALYAKRMKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMELRQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----KVIVPNDIVLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVQEESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVHNRGARVVATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
A I+K +G ++I RA+ + ++ + L E ++ E + A L
Sbjct: 491 AFEISKRLGLSERVINRARNHI-----STDTNKIENMIAKLEESQKNAERDWKEAEELRK 545
Query: 574 EIMDLYRE 581
+ L+RE
Sbjct: 546 QSEKLHRE 553
>gi|260887326|ref|ZP_05898589.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|330838921|ref|YP_004413501.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
gi|260862962|gb|EEX77462.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|329746685|gb|AEC00042.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
Length = 791
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 282/569 (49%), Gaps = 64/569 (11%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A +P G E ++LL +T A+ + + + DI L A G +L +
Sbjct: 32 RAVLPSG-DFAEVEELLRETEEAVRLSAFSSPPMGGVFDIRESLAKAERGAVLDLGDFTD 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ T+RA+ V K+ + E+D PL+ E K L +LE ++ +D +
Sbjct: 91 LLSTMRAMRAV-KRFFKEVEMD-------LPLIKEQAKGIEILGQLERRLENSVD-EHGN 141
Query: 127 ILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS +L IR E + E ++++L + Q F +IT+R R + I
Sbjct: 142 LLDDASVELSRIRRELRSGRRRAKEQMEAILHRTEYQKF----FQDAIITQRAERNVIPI 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ P GI + S+SGAT F+EP V+ NN +L+ +E E IL LL+ E+
Sbjct: 198 KQEYRQSFP-GIVHDQSASGATLFIEPMALVDLNNDLKQLALAEKTEVQRILRLLSQEVG 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
K+ ++ + +D FARA A M P ++ + ++ +HPL+
Sbjct: 257 KNGSVLEGNCAILASLDFIFARAKLAADMQAKRPAINREGRTKLVAA------RHPLIDA 310
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+ + VPIDI + R+++ITGPNTG
Sbjct: 311 AKV-----------------------------------VPIDIALGEAYRMLLITGPNTG 335
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL +LM ++G Y+PA + + + IGD QS+EQ+LSTFS H+S +
Sbjct: 336 GKTVSLKTIGLFALMVQSGCYIPAAAGSEISVYTNVYTVIGDEQSIEQSLSTFSAHMSHL 395
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V +LE V L+L+DEIG+GTDP EG ALA +IL+ R +VTTHY++L
Sbjct: 396 VKLLECVEGTDLLLLDEIGAGTDPEEGAALAMAILEQFLARGSSTIVTTHYSELKTFAFT 455
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
ENA EF +ETLRPTYR+L G G SNA I++ +G I RAQ+ ++ +
Sbjct: 456 REGIENACVEFDVETLRPTYRLLTGMPGASNAFAISRRLGLSEAAILRAQQFIKADHAQF 515
Query: 543 QQHRKSELYQSLMEERRK---LESQARTA 568
++ + LM E+R +E Q R A
Sbjct: 516 EKVVNQLESEKLMYEQRNADIMERQQRVA 544
>gi|152975927|ref|YP_001375444.1| DNA mismatch repair protein MutS domain-containing protein
[Bacillus cytotoxicus NVH 391-98]
gi|152024679|gb|ABS22449.1| DNA mismatch repair protein MutS domain protein [Bacillus
cytotoxicus NVH 391-98]
Length = 633
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 171/579 (29%), Positives = 287/579 (49%), Gaps = 68/579 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +I I+ G +L PSE +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFLGISNIDNIMQKLEKGMILEPSEFVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+ + ++P+L N + +EE+I FCI + AS++L+ IR +
Sbjct: 107 LDK--------EFFAPMLAAYANSMSEFKSIEEEIQFCIKGNR--VDSAASKELKRIRNQ 156
Query: 142 ----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ E L+ L A + + I + I+K+ R + +KAS+K + G +
Sbjct: 157 MDSVEGKIKERLNKFLNSSANKKY----IQEFFISKKDDRYTIPVKASYKNQVA-GTIVA 211
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
VSS G+T F+EP N L E EE IL+ L+ I ++ +IK ++ V +
Sbjct: 212 VSSKGSTVFIEPNTVTTLNVELASLRAEEAMEEYQILATLSGMILENIYQIKINIELVSQ 271
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
DL FA+A F++ + G+ P L+ + I + KHPLL G
Sbjct: 272 YDLVFAKAKFSKQIGGIEPKLNDYGY------IKLVHCKHPLLSGEV------------- 312
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
+P++ ++ + R ++ITGPN GGKT +KT+GL +L
Sbjct: 313 -----------------------IPLNFEIGQKYRSLIITGPNAGGKTIVLKTIGLLTLA 349
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+ +G ++ + + F+ I DIGD+QS+E LSTFS H+ + +I+E+ + +L+L
Sbjct: 350 AMSGFHIAGERETEIAVFEHIFVDIGDNQSIENALSTFSSHMKNLSEIMEVSNNNTLLLF 409
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DEIGSGT+P+EG ALA SIL+ + V TTHY ++ + + F NAA +F ET
Sbjct: 410 DEIGSGTEPNEGAALAISILEEFYHMGCITVATTHYGEIKRFSEMHSDFMNAAMQFHSET 469
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE--RLRPERQQH---RKSELYQ 552
L P Y++L G +G+SNAL I++ + ++QRA++ +E R E+ RK ++ +
Sbjct: 470 LEPMYQLLIGKSGESNALWISRKMNVREHVLQRAKEYMENKEYRLEKLHEGKVRKPKIVK 529
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
+EE + R E +YRE +++ V+
Sbjct: 530 QAVEEAYAYKKGDRVRLLDDDEFGIIYREKDNFSNVVVF 568
>gi|381183546|ref|ZP_09892273.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
gi|380316562|gb|EIA19954.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
Length = 784
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 290/577 (50%), Gaps = 73/577 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S + QK+ ++T +++ S P+ + + D+A L G L+ EI + L
Sbjct: 39 SFDSIQKMQSETEEGAKIIRLKGSAPI--TGLSDVAPHLKRLEIGGDLNGLEIYQIGSNL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
R V+ V K + E G L PLL EL K L +LEE+I +D + +LD A
Sbjct: 97 R-VSRVMKNFMDDLEEIGVEL----PLLFELTKEILVLKDLEEEINLTVD-EAGYMLDTA 150
Query: 132 SEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L +R R E L+SLL+ A A + +IT R R + +K ++
Sbjct: 151 SETLRSVRQTLARTEGRVREKLESLLRDRNA----ATMLSDAIITIRNDRYVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
G+ + S+SG T F+EP+ V+ NN L E E IL+ ++A++A+ +E
Sbjct: 207 SHY-GGVIHDQSASGQTLFVEPQSVVDLNNERRALQAKENQEIERILAEMSAKLAEFIQE 265
Query: 248 IK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
I Y++ R D A+A F + + P H++ + + +HPLL
Sbjct: 266 IHHNTYILGR---FDFILAKARFGKSQKAITP------HLNNEGVTKLYAARHPLL---- 312
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
D EN V DI + +VITGPNTGGK
Sbjct: 313 ----------------DPENV---------------VANDILLGDGYSTIVITGPNTGGK 341
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGL ++M++AGL +PA+ + ++ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 342 TITLKTLGLLTMMTQAGLQIPAQEESLVAIYEDIFADIGDEQSIEQSLSTFSSHMTNIVS 401
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
ILE +++ SLVL DE+G+GTDP EG ALA SIL + R V TTHY +L
Sbjct: 402 ILEKLNQNSLVLFDELGAGTDPQEGAALAISILDEVAKRGASVVATTHYPELKAYGYNRV 461
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF++ETL PTY++L G G SNA I++ +G + +I A+ LV + +
Sbjct: 462 FATNASVEFNVETLSPTYKLLIGIPGRSNAFEISRRLGLNEGVIDEARALV-----DTES 516
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+E+ SL E+R E++ + A+ L + L R+
Sbjct: 517 ADLNEMISSLEEKRNLAEAEYKEASELAKDADKLLRD 553
>gi|229918290|ref|YP_002886936.1| MutS2 family protein [Exiguobacterium sp. AT1b]
gi|229469719|gb|ACQ71491.1| MutS2 family protein [Exiguobacterium sp. AT1b]
Length = 784
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 254/507 (50%), Gaps = 67/507 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
L L + D+ + A G +LS SE+ AV + R V N +KL E D + + R
Sbjct: 62 LPLGGLTDVRAEVKRAAIGSVLSTSELLAVAAVMYGGRQVKNFIEKLHE----DNEEI-R 116
Query: 96 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
L E L E+E+ I ID + + D AS L +R + R+ E +D
Sbjct: 117 IPRLDEYADKLTKLIEVEQAIRHAIDDQG-TVQDSASPQLRGLRTQL-RSFEGSVRSRID 174
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKQEYRQAF-GGIVHDQSASGQTLFIEPQ 227
Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
V NN EVRL E AE ILS L+ E+ I +D + E+D FA+ +
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIERILSALSNEVGGVHDAIMTNLDVLAELDFIFAKVAYG 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
Q M P L+ + I ++ +HP + P
Sbjct: 286 QEMKATEPKLND------NREIKLKQARHPFI----------------P----------- 312
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D VPI +++ + +VITGPNTGGKT ++KT+GL LM ++GLY+PA+
Sbjct: 313 --------KDEVVPITVELGEDYTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAEF 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
L FD + ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAVYADIGDEQSIEQSLSTFSSHMTNIVGMLDKIDFMSLVLFDELGAGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484
Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLV 535
G SNA I++ +G ++I +A+ V
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHV 511
>gi|336431523|ref|ZP_08611372.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336013825|gb|EGN43697.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 791
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 215/407 (52%), Gaps = 47/407 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ E A+ EI+ + ++D FAR A M+ PIL++ D
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYRILTDLDFIFARGALALSMNASRPILNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL +P K VPI + +
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++ L F + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+ A + R Q +L L +R +E + A+ EI
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEI 545
>gi|420194100|ref|ZP_14699929.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
gi|394266798|gb|EJE11423.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
Length = 782
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 257/500 (51%), Gaps = 56/500 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRCLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
+I+K +G II +A+ ++
Sbjct: 494 DISKKLGLSLNIINKAKTMI 513
>gi|452990484|emb|CCQ98332.1| MutS2 protein [Clostridium ultunense Esp]
Length = 829
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 291/579 (50%), Gaps = 77/579 (13%)
Query: 12 PF--GKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF + +EE+Q+ + + PL I DI + A G +LSP E +
Sbjct: 79 PFFTYEEVEEAQEATAEGVTVYRLRGEVPL--GGIHDIRPSIRRARMGGVLSPQEFLDLA 136
Query: 70 RTLRAVNNVWKKLTEAAELDGDSL---QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
TL A + L E A D +SL + Y+ +E LKN LE KI ID +
Sbjct: 137 DTLAAGRRLKHFLLELA--DKESLPILKEYAERIEGLKN------LETKIHGTID-EYGE 187
Query: 127 ILDRASEDLELIRAERKR----NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS L IRAE K E LD ++K + Q I + ++T R R + +
Sbjct: 188 VLDGASPLLRKIRAEIKGLESGIKERLDRMVKDPSYQKM----IQEQIVTLRNGRYVIPV 243
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ G+ + S+SGAT F+EP+ V NN L ++++ EE I L LT
Sbjct: 244 KQEYRTAF-GGLVHDQSASGATLFIEPEAVVRLNN---ELRDAKLKEEKEIERILRELTH 299
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
A+ + ++ + E+D F +A +A + PIL + + + +HPL
Sbjct: 300 TTAEEADALSVNVESLAELDFIFTKAKYALSIKASRPILKRKKAIKLKKA------RHPL 353
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + VPID++V ++VITGP
Sbjct: 354 IPKEKV-----------------------------------VPIDVEVGDSFTMLVITGP 378
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KT+GL +LM++AGL +PA + F + ADIGD QS+EQ+LSTFS H+
Sbjct: 379 NTGGKTVTLKTIGLMTLMAQAGLQIPAGEGSEVAVFSQVFADIGDEQSIEQSLSTFSSHM 438
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV I+E ++ +SL+L+DE+G+GTDP+EG ALA +IL+ L R V TTHY++L
Sbjct: 439 THIVKIIEEMTPDSLILLDELGAGTDPTEGAALAIAILEELYRRDARVVATTHYSELKVY 498
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF +ETL PTYR+L G G SNA IA+ +G ++II +A+ V+
Sbjct: 499 AYNHPGVMNASVEFDVETLSPTYRLLLGIPGRSNAFLIAERLGLPKEIIDKARGQVDEES 558
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
E +Q + +L E R++ E + A + E++ L
Sbjct: 559 RELEQ-----MITNLAESRKEAEMKREEAERIQEEMVRL 592
>gi|423650449|ref|ZP_17626019.1| MutS2 protein [Bacillus cereus VD169]
gi|401281608|gb|EJR87514.1| MutS2 protein [Bacillus cereus VD169]
Length = 786
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 178/572 (31%), Positives = 285/572 (49%), Gaps = 64/572 (11%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
K + E Q ++ + + + S PL I DI + A G +LSP+E+ + T+
Sbjct: 41 KEIVEMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
N+ + + + A+ +G L P+LE + L +LE+KI CI ++ D AS+
Sbjct: 99 SRNMKRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASD 152
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + R E L+++ + AQ + ++T R R + +K ++ +
Sbjct: 153 KLRGIRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGV 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SG T F+EP+ VE NN E E IL +LT E+A +
Sbjct: 209 Y-GGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVL 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 268 SNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P + VP +I + + +VITGPNTGGKT ++K
Sbjct: 313 ------DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 347 TVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKA 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA
Sbjct: 407 DFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF + TL PTY++L G G SNA I+K +G ++I++A+ + ++
Sbjct: 467 SVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIEN 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ L E ++ E A +L + L+RE
Sbjct: 522 MIAKLEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|335429528|ref|ZP_08556426.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
contractile SSD-17B]
gi|334889538|gb|EGM27823.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
contractile SSD-17B]
Length = 780
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 268/515 (52%), Gaps = 50/515 (9%)
Query: 23 LLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL +T AL ++ L I DI + A G +L+P+E+ + + N + K
Sbjct: 45 LLTETDEALRLLYRLGDLPFGGITDIRPHIKRATIGGILNPNELLKISTFIYGSNQIRKY 104
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AA+++ + ++ ++ ++N L++L +I CID ++D AS L+ IR +
Sbjct: 105 ---AAKMEQEQIES-DKIVFYIENLFNLSDLSREINRCID-DFSNVVDDASPKLKDIRNQ 159
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
K N + L + Q + + LIT R R V +K +K GI + S S
Sbjct: 160 IKTNEARIKDRLNSILQS--QKDLLTEQLITIRNDRFVVPVKVENKNTFG-GIIHDQSQS 216
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G T+++EPK VE NN L N E E IL LT +++ E++ + + +D
Sbjct: 217 GNTFYIEPKMVVEVNNRIQNLKNEEKREIEKILRELTLSVSEYVGELQENVYNIKLLDFI 276
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
+ +A +A+ + P ++ + V + +HPL+ P
Sbjct: 277 YTKAKYAKATNATKPTINDEGFVHLIKA------RHPLI----------------P---- 310
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
D VP DI + E ++ITGPNTGGKT ++KTLGL +LM +AG
Sbjct: 311 ---------------EDEIVPNDIMLGQEFTSIIITGPNTGGKTVTLKTLGLLTLMMQAG 355
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
L +PA H +L FD + ADIGD QS+EQ+LSTFS H+ I++I++ ++ SLVL+DE+G
Sbjct: 356 LLVPANEHSKLAVFDNVFADIGDEQSIEQSLSTFSSHMKTIINIVDNITINSLVLLDELG 415
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP EG ALA S+L Y R R + TTHY +L + NA+ EF++ETL+PT
Sbjct: 416 AGTDPKEGAALAMSLLDYFRKRGSRIIATTHYPELKTYAYNTEKVINASVEFNVETLKPT 475
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
Y++L G G SNA I+K +G + +I+ A++ V+
Sbjct: 476 YKLLIGIPGRSNAFEISKRLGLNELVIEDAREKVD 510
>gi|431591285|ref|ZP_19521293.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1861]
gi|430592228|gb|ELB30249.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1861]
Length = 642
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 257/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S + K I + +I ++ + IKAS+K + DG ++ S+ G T+
Sbjct: 161 EKEIQSKMLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTF 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|372324775|ref|ZP_09519364.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
gi|366983583|gb|EHN58982.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
Length = 795
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 187/569 (32%), Positives = 302/569 (53%), Gaps = 63/569 (11%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR---AVNNV 78
LL QT AL + + + L + D+ I +L+ SE+ + +L+ AV +
Sbjct: 46 LLGQTDDALLIDRRRGGLPIRATNDLTEIFKRIKLKAVLASSELADLNASLQSSQAVIDF 105
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
++ + + E+ D+LQ+ +L L+ ++L +++ ID + + LD AS+ L I
Sbjct: 106 FQTIKD--EIWFDNLQQ---ILFLVNRLTDFSQLSQRLDQTIDDQGKM-LDTASKKLAHI 159
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + N+ LL K+ + A + + +IT R + + +KA +K G+ +
Sbjct: 160 RKNTQLTETNIRELLLKMT-KGNDAKYLSENVITTRDGVLVLPVKAENKKHFG-GVVHDQ 217
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S SG T ++EP+ AV N+ L E E AIL ++ + ++K + + E+
Sbjct: 218 SQSGLTLYIEPEAAVSLNDHLHDLEIDERREINAILIDISQSLFPLYEQLKLNNELIGEL 277
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
DL A+A A MD + P ++S+ I+++ +HPLL
Sbjct: 278 DLIQAKARLANTMDAIKPQINSEK------EIDLQAARHPLL------------------ 313
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
SD V DIK+ + ++ITGPNTGGKT MKTLGL LM+
Sbjct: 314 PSDA------------------VANDIKLGHDFISLIITGPNTGGKTVLMKTLGLLQLMA 355
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
++G+++ A + + FD I ADIGD QSLEQ+LSTFS H+ I +I+ +SLVL+D
Sbjct: 356 QSGIFITADKNSSIYVFDNIFADIGDEQSLEQSLSTFSSHMMNIKEIIADSDTDSLVLLD 415
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDPSEG ALA +I++ L +R L + TTHY +L D+ NA+ EF L+TL
Sbjct: 416 ELGAGTDPSEGAALAMAIVENLSERKILNLTTTHYPELKVFADQKPFAVNASMEFDLKTL 475
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
RPTYR+L G G SNA+ IA+ +G D+++++RA+ V+ P+ Q+ + L Q L+ +R
Sbjct: 476 RPTYRLLIGIPGQSNAITIARRLGVDKRVLERAEAYVD---PKDQE--LNNLIQGLVFQR 530
Query: 559 RKLESQ----ARTAASLHAEIMDLYREDS 583
+ L+ Q R A +++E +L R+ S
Sbjct: 531 QDLDQQQEDLQRRLADVNSEKENLDRQSS 559
>gi|430743730|ref|YP_007202859.1| mismatch repair ATPase [Singulisphaera acidiphila DSM 18658]
gi|430015450|gb|AGA27164.1| mismatch repair ATPase (MutS family) [Singulisphaera acidiphila DSM
18658]
Length = 693
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 282/560 (50%), Gaps = 53/560 (9%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+ DI + A G +L E+ TLRA+ ++ + L+ E + L L
Sbjct: 68 LHDIRPQVRRAQIGAMLDAEELAQAVETLRAIGHLNQWLSRIGE-------EFPRLGGLK 120
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ + + I C+D + +LD AS L +R E + E + L++ + ++
Sbjct: 121 QEVGEFSGVVNAIEGCLDSRG-NVLDTASRKLSALRREIGQVEEKIQETLRR----MLRS 175
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLP---------DGIALNVSSSGATYFMEPKGAVE 214
I KR R H Y+LP G S+S T ++EP+ E
Sbjct: 176 NEI------KRILRFPNFTMVGHHYVLPIAKEHRGEIQGSVHRTSASNETVYIEPQAIAE 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+ + E E IL L+A++ + ++ + E+DL AR ++ +DG
Sbjct: 230 HSAQLSFIRAREAKEIRRILRWLSAQLGQVAESALGSLETLGELDLIHARGRYS--LDGR 287
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLL----LGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+ + + + + G +HPLL G + P ++D E+ VG
Sbjct: 288 M----TPPDFNEEGKLALRGARHPLLEAFFRGDTAPPRVPEPPREAPTEAD-ESPPAIVG 342
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
S VPID+ + + + +V+TGPNTGGKT ++KT+GL ++M++AGL++PA
Sbjct: 343 SQEPRTV---VPIDVHLGLQFQTLVVTGPNTGGKTVAIKTVGLLAIMAQAGLHIPAHQGS 399
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+LP FD +LADIGD QSLEQ+LSTFS H+ R+ +IL S +SLVL+DE+G+GTDP+EG
Sbjct: 400 QLPVFDEVLADIGDEQSLEQSLSTFSSHVRRVTEILARASSKSLVLLDEMGAGTDPAEGA 459
Query: 451 ALATSILQYLRDRVGL-AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
AL +IL + D +G A+VTTH DL + R ENAA EF LETLRP YR+ G
Sbjct: 460 ALGRAILDEI-DSIGARAIVTTHLGDLKTYAFSNPRVENAAVEFDLETLRPRYRLHIGDI 518
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL---MEERRK--LESQ 564
G SNAL IA+ + I+ RA K + + R Q + E+ Q L EE R+ L +Q
Sbjct: 519 GQSNALQIARRLSLPEHIVARAAKYLAQGRG--QDLPELEILQKLRKDAEEARQAALTAQ 576
Query: 565 A---RTAASLHAEIMDLYRE 581
+ RT +L+ + DL R+
Sbjct: 577 SEAERTREALNQRLTDLQRQ 596
>gi|423557869|ref|ZP_17534171.1| MutS2 protein [Bacillus cereus MC67]
gi|401192406|gb|EJQ99422.1| MutS2 protein [Bacillus cereus MC67]
Length = 786
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/499 (33%), Positives = 257/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + AE +G L P+L
Sbjct: 65 LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAE-NGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 EGHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|365135255|ref|ZP_09343723.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
gi|363612692|gb|EHL64223.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
Length = 795
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 272/543 (50%), Gaps = 72/543 (13%)
Query: 12 PFGKSLEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
P ++ +E + L QT A ++ ++ S++E++ GI+ A G +LS +E+ V
Sbjct: 35 PAWETPDEVRAALEQTDAMTTLLIKNGSPRFSSVENVRGIVQRAEKGGVLSMAELLTVAD 94
Query: 71 TLRAVNNV--WKKLTEAAELDGDSL---QRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
TLR + W LTE L D L P LE + L+E E
Sbjct: 95 TLRNFRELVKWYGLTEHDVLPVDDLFYAMTPQPTLEKTIKDSILSENE------------ 142
Query: 126 IILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+ D AS+ L IR A + LD++ K +A + + +++ R R V
Sbjct: 143 -MADTASDTLYDIRRKIHAAENSIRDKLDAITKSQSASRY----LQDAVVSLRNGRFVVP 197
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KA H+ + G+ +VSSSG+T F+EP VE N ++L N E AE IL+ +A+
Sbjct: 198 VKAEHRGEV-GGVIHDVSSSGSTLFVEPTAVVEANAKILQLRNLEQAEIERILAAFSAQT 256
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A E + + +LE+D+ A+A A + P V+ D + ++ +HPL+
Sbjct: 257 AALEPMFTFGYEAMLELDVLLAKARLALDQKAMKP------QVNDDHAFSLVRARHPLID 310
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+ + VP+DI + +VITGPNT
Sbjct: 311 PAVV-----------------------------------VPVDIALGGAYDTLVITGPNT 335
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL M++ G +PA + F IL DIGD QS+EQ+LSTFSGHI
Sbjct: 336 GGKTVTLKTAGLLCAMAQHGYLIPAHESSSVCVFGEILVDIGDEQSIEQSLSTFSGHIKN 395
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I IL+L ++LVL+DE+G+GTDP+EG ALA S+++ LR + TTHY++L
Sbjct: 396 ITGILKLAGPQTLVLMDELGAGTDPAEGAALAVSVIEALRGLGAKIMATTHYSELKIFAL 455
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+NA+ EF++ETLRPTYR+ G G SNA I++ +G +II+ A+ E L E
Sbjct: 456 DTPGVQNASCEFNVETLRPTYRLSVGVPGKSNAFLISQKLGLAPEIIENAR---EHLSNE 512
Query: 542 RQQ 544
QQ
Sbjct: 513 DQQ 515
>gi|408789877|ref|ZP_11201518.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
gi|408520899|gb|EKK20921.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
Length = 785
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 250/486 (51%), Gaps = 72/486 (14%)
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCN-FLTELEEK-----IGFCIDCKLL 125
L AV+ K+L A L+G L ++S +L+ ++ N F TELE + ++ +L+
Sbjct: 68 LVAVDQPLKRLEIGANLNGKELAQFSQILQTVQRINQFFTELESDHVELLTLYSLNEQLV 127
Query: 126 II-----------------LDRASEDLELIRAERKRNMENLDSLLK-KVAAQIF--QAGG 165
+ LD AS+ L+ +R + +E + +K K+ I +A
Sbjct: 128 ALPELNQRLLQSVDATGWLLDTASQQLQQLRHQ----IEQTQATIKTKMNGYIHGKRAKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ +IT R R + +KA K GI + S+SG T ++EP+ VE NN +
Sbjct: 184 LSDTVITIRDDRYVIPVKAEAKQQF-GGIVHDQSASGQTLYVEPQAVVELNNQLRFQQKA 242
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
+ EE IL+ L+ E+ + ++ +DL A+A +A+++ P LS ++ V
Sbjct: 243 ALQEEKRILAELSDELRPEGAHLAANATQLGHLDLINAKARYARFLHATKPKLSIRNEVH 302
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
++ +HPL+ SL NS I++
Sbjct: 303 LKTA------RHPLI------SLDRVVGNS---------------------------IEL 323
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+C R ++ITGPNTGGKT +MKTLGL LM+++GL++ A ++ FD + ADIGD
Sbjct: 324 NQDC--RQLIITGPNTGGKTITMKTLGLLQLMAQSGLFIAADEGSQVGVFDEVFADIGDE 381
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQNLSTFS H+ I+ IL+ + SLVLIDE+G+GTDPSEG ALA +IL +
Sbjct: 382 QSIEQNLSTFSSHLDNIIQILQQTTARSLVLIDELGAGTDPSEGAALAMAILDAIERLHS 441
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L ENA+ EF ETLRPTYR+L G G SNAL IA+ +G
Sbjct: 442 TVLATTHYPELKAYAYNHVATENASMEFDEETLRPTYRLLMGVPGQSNALQIARRLGLSE 501
Query: 526 KIIQRA 531
+I+ +A
Sbjct: 502 QIVNQA 507
>gi|331002566|ref|ZP_08326082.1| hypothetical protein HMPREF0491_00944 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330408294|gb|EGG87770.1| hypothetical protein HMPREF0491_00944 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 785
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 280/562 (49%), Gaps = 69/562 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E QK + T+AAL ++ + L LS ++DI+ L G LLS E+ + L A +
Sbjct: 42 EIQKNQSHTTAALDRIRLKGSLSLSEVKDISDSLKRLEIGSLLSQPELMKILSILNAASK 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
E D D L+ Y L+ +K +L++++ CI + I+ D AS +L
Sbjct: 102 AISYGLHFDEEDYDILEEYFSALDEIK------DLKKELSRCIISEE-IMADNASPELSH 154
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR R ++ ++S + I A + +IT+R C+ IK+ +K + G+
Sbjct: 155 IR----RKIKQINSKMHTELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-GVI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S++G+T F+EP ++ NN L E E IL L+ A+ ++ +
Sbjct: 210 HDQSATGSTVFIEPIAVIKMNNELKSLFMDEKKEIEKILENLSLLSAQYIEPLRQNAKTL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +D +A+A ++ M+ P +S+ + INI+ +HPLL +
Sbjct: 270 IFLDFVYAKANLSKKMNASEPKFNSKHY------INIKEGRHPLLDTKKV---------- 313
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPI+I + +++ITGPNTGGKT S+KT+GL +
Sbjct: 314 -------------------------VPINISIGDNYDLLIITGPNTGGKTVSLKTVGLFT 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL++PA L FD + ADIGD QS+EQ+LSTFSGH+ IV IL SL
Sbjct: 349 LMGQSGLHIPAFEGSELSVFDNVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANSLC 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+ EF +
Sbjct: 409 LFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCEFDV 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ 544
TL PTYRIL G G SNA IA +G II A + L+ RL +RQ
Sbjct: 469 ATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDRQI 528
Query: 545 HRKSELYQSLMEERRKLESQAR 566
K +L S+ + +R++ES R
Sbjct: 529 IEKDKL--SIQKYKREIESLKR 548
>gi|228941731|ref|ZP_04104278.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974655|ref|ZP_04135221.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981249|ref|ZP_04141549.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|384188627|ref|YP_005574523.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676948|ref|YP_006929319.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|423386045|ref|ZP_17363301.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|423527598|ref|ZP_17504043.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|452201022|ref|YP_007481103.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|228778449|gb|EEM26716.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|228785058|gb|EEM33071.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817943|gb|EEM64021.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326942336|gb|AEA18232.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401634696|gb|EJS52459.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|402452967|gb|EJV84777.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|409176077|gb|AFV20382.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|452106415|gb|AGG03355.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 786
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L ELE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMADNGVEL----PILETHVAQIVSLYELEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|188586428|ref|YP_001917973.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351115|gb|ACB85385.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 796
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 183/573 (31%), Positives = 285/573 (49%), Gaps = 78/573 (13%)
Query: 24 LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
L +TS A ++ + + L + DI L A L E+ + + V+N +K+T
Sbjct: 48 LKETSEAKELLAERDISLRGLRDIRKQLQLAAKDGTLQGPELFQISEII-GVSNRVRKIT 106
Query: 84 EAAELDGDSLQRYSPLLE----LLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLELI 138
+ D+ Q P+L L N L EL++KI + K D AS +L I
Sbjct: 107 D------DNFQANYPILSSLISKLPELNHLKKELDDKIDENGEVK-----DSASVNLRNI 155
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
R + K+ L S +K +I Q+G + ++T R R V +KA ++ ++P GI
Sbjct: 156 RQKIKK----LQSQVKTSVNRILQSGEKYLQDKIVTMRYDRYVVPVKAEYQNMVP-GIIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG T ++EPK VE NN + E +E IL L+ +I ++ + ++
Sbjct: 211 DQSSSGMTVYIEPKEVVEKNNELRQAKREEHSELEKILQGLSQKIKGYHYQLHDSLQILV 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D A+ ++ M+ L+ + + I+G KHPLL
Sbjct: 271 ELDFILAKGSLSRRMNAREAELNQEKRLEI-----IKG-KHPLL---------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ +P+D+K+ E +VITGPNTGGKT S+K +GL +L
Sbjct: 309 --------------------GEDAIPVDVKLGDEFNTMVITGPNTGGKTVSLKMVGLFTL 348
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA+ + F+ + ADIGD Q +EQ+LSTFS H+S IV I++ + ESL+L
Sbjct: 349 MTQSGLHIPAERGTEMGVFEQVFADIGDEQDIEQSLSTFSSHMSNIVKIVDHANSESLIL 408
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA S+L++ + ++ TTHY L ENA+ EF E
Sbjct: 409 LDELGAGTDPTEGSALAMSLLEHFHNLGCRSIATTHYTQLKSFAHAREGVENASVEFDEE 468
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS- 548
TL PTY +L G G SNA I++ +G KII A+ VE L + KS
Sbjct: 469 TLEPTYNLLIGVPGKSNAFVISRRLGLSDKIISNAKSFLADEEIEVEELITSLTEKEKSS 528
Query: 549 -ELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
++ + L ER K+E + A L E ++ R
Sbjct: 529 QKMKEELERERAKVE---QVKAQLEQERKEISR 558
>gi|297617881|ref|YP_003703040.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145718|gb|ADI02475.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 779
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 295/577 (51%), Gaps = 87/577 (15%)
Query: 7 QKAQIPFG--KSLE-------ESQKLLNQ-TSAALAMMQSQPLD-LSTIEDIAGILNSAV 55
QKA P G K+LE E+ + Q T AL +++ + L+ ++DI +
Sbjct: 20 QKACSPMGAEKALELQPVYDLETASMRQQETGEALKVLRLRDTGFLTGVKDIRQHMRRVR 79
Query: 56 SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEE 114
SG LS E+ V +RA + + + + E R P L L F+ E +E
Sbjct: 80 SGVPLSTGELLDVGALVRA-SRLARDMVEG---------RECPGLCGLTGDLFVDEGIER 129
Query: 115 KIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
I ID + + D AS +L+ IR + R E L ++ Q F + +
Sbjct: 130 AIRESID-EGGEVRDTASPELKAIRNRIATAKNRVREYLQEFVRSSHYQKF----LQDAI 184
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
IT+R+ R V +KA ++ + GI + S+SGAT F+EP+ V NN RL +E E
Sbjct: 185 ITERQGRYVVPVKAEYRSEV-KGIIHDESASGATVFVEPEAVVHVNNDIRRLEMAENREI 243
Query: 231 TAIL----SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
IL SLL +++ ER+++ L D +DL A+ A M+ V P L+ Q
Sbjct: 244 EKILRRLTSLLEPVVSELERDLEILTD----LDLVLAKGRLALEMNAVAPRLNGQGVFVL 299
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
+ +HPLL KG VP+D++
Sbjct: 300 RRA------RHPLL--------------------------------GKG----AVPVDLE 317
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ ++VITGPNTGGKT ++KT+GL +LM+ +GL++PA + D + ADIGD Q
Sbjct: 318 LGKGFDILVITGPNTGGKTVTLKTVGLLTLMAMSGLFVPAAEGTEIALVDAVYADIGDEQ 377
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+EQ+LSTFS H++ I+DIL+ + +SLVL+DE+G+GTDP EG AL +IL L +
Sbjct: 378 SIEQSLSTFSSHMTNIIDILKRATSQSLVLLDELGAGTDPVEGAALGRAILGELLAKGVK 437
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
AVVTTH ++L ++ + ENA EF TL+PTYR+ G G SNAL IA+ +G D +
Sbjct: 438 AVVTTHQSELKVFAFQEAKVENACVEFDPITLQPTYRLSIGIPGHSNALEIAERLGLDHR 497
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
I+++A++ V P+ +Q + + E RR+LES
Sbjct: 498 IVEKARQFV----PQSEQD-LGRIINKVQEHRRRLES 529
>gi|89098890|ref|ZP_01171770.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
gi|89086294|gb|EAR65415.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
Length = 784
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 265/528 (50%), Gaps = 66/528 (12%)
Query: 18 EESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE +L +T A+ +++ + + L I DI + +V G +LSP E+ + T+ A
Sbjct: 41 EEVVRLQEETDEAVKVLRIKGNIPLGGIFDIRPHVKRSVIGGMLSPQELVQIASTVHASR 100
Query: 77 NVWKKL----TEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ + + E +EL P+L E + L ELEE I ID + LD A
Sbjct: 101 QLKRFVDDFSNEESEL---------PILTEYMDRVIVLAELEEAIRMAIDENGEM-LDSA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L IR + + R E L+S+++ A A + +IT R R + +K ++
Sbjct: 151 SDALRSIRTQLRTRESRVRERLESMIRSSNA----AKMLSDAIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSG T F+EP+ V+ NN + E E IL L+ A + E
Sbjct: 207 GHY-GGIIHDQSSSGQTLFIEPQAIVQLNNELQSIRVKEQQEIERILVELSGRAAAYQPE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ +++ + E+D FA+ +++ + P V+ + IN+ +HPLL
Sbjct: 266 LDMIVEVLAEVDFMFAKGRYSRRLKASKP------EVNNERRINLFKARHPLL------Q 313
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ A +N DI + + +VITGPNTGGKT +
Sbjct: 314 IDEAVAN-----------------------------DISLGRDYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 345 LKTVGLCTLMAQAGLQIPALDGSEVSVFGAVYADIGDEQSIEQSLSTFSSHMVNIVDILA 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
ESLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 405 KADFESLVLFDELGAGTDPQEGAALAISILDEVYKRGSRVIATTHYPELKAYGYNREGVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF +ETL PTY++L G G SNA I++ +G D +I+ A+ V
Sbjct: 465 NASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLDNSVIESARSHV 512
>gi|172058180|ref|YP_001814640.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
gi|229486374|sp|B1YJY5.1|MUTS2_EXIS2 RecName: Full=MutS2 protein
gi|171990701|gb|ACB61623.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
Length = 788
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 270/548 (49%), Gaps = 74/548 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
D+ + A G +LS SE+ AV + + V K E D L R L ++
Sbjct: 70 DVRSEVKRAEIGSVLSTSELLAVADVVYSGRQV-KAFQERLHEDHPDL-RLPALDSRIEQ 127
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQI 160
L E+E+ I ID + + D AS+ L +R++ R++E +D +L+ + +
Sbjct: 128 ITKLVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRNKSKML 185
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN--M 218
A ++T R R CV +K ++ GI + S+SGAT F+EP+ V NN
Sbjct: 186 SDA------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNEIQ 238
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
E RL E AE IL+ L+A + ++ +D + E+D A+A + + V P L
Sbjct: 239 EARLK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEPRL 296
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ H+ + +HP + P D
Sbjct: 297 NENRHIVLKEA------RHPFI----------------P-------------------DD 315
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI + + E +VITGPNTGGKT ++KT+GL LM ++GLY+PA + L FD I
Sbjct: 316 EVVPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFDAI 375
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQNLSTFS H++ IV ++ + SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 376 YADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAILD 435
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
++ R TTHY++L NA+ EF +E+L PTYR+L G G SNA I+
Sbjct: 436 EVKRRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFEIS 495
Query: 519 KSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
K +G + ++I Q + ++ RL E + R L + L++E+++L +
Sbjct: 496 KRLGLEDRVIDAARDQVGTDAQSVETMIGRL--EEAKQRAESLERELLQEQQRLVEEREE 553
Query: 568 AASLHAEI 575
AEI
Sbjct: 554 FEREQAEI 561
>gi|167767441|ref|ZP_02439494.1| hypothetical protein CLOSS21_01960 [Clostridium sp. SS2/1]
gi|167710733|gb|EDS21312.1| MutS2 family protein [Clostridium sp. SS2/1]
gi|291558723|emb|CBL37523.1| MutS2 family protein [butyrate-producing bacterium SSC/2]
Length = 800
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 262/523 (50%), Gaps = 63/523 (12%)
Query: 60 LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L E+ + R L +V N V + +L+ DSL EL ++ L +L +I
Sbjct: 84 LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CI + I D AS L+ IR K+ + + + L + + + + ++T R R
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSVSNQDKLQDAIVTMRNGRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
C+ +K ++ G+ + S+SG T F+EP V NN L E +E ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+ + ++ + ++ +D FA+A +A+ +D PI D INI+ HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VPI++ + + ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA------- 531
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A
Sbjct: 455 FALSTDDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514
Query: 532 ----QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
+ ++ L +Q K + + ++E R+++E+ R+ S
Sbjct: 515 VKDFETILADLEKSKQTIEKEQ--EEILEYRKEIETLRRSLKS 555
>gi|154503470|ref|ZP_02040530.1| hypothetical protein RUMGNA_01294 [Ruminococcus gnavus ATCC 29149]
gi|153795570|gb|EDN77990.1| MutS2 family protein [Ruminococcus gnavus ATCC 29149]
Length = 791
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 215/407 (52%), Gaps = 47/407 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ E A+ EI+ + ++D FAR A M+ P+L++ D
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYHILTDLDFIFARGALAFSMNASRPLLNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL +P K VPI + +
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++ L F + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+ A + R Q +L L +R +E + A+ EI
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEI 545
>gi|229169279|ref|ZP_04296990.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
gi|228614174|gb|EEK71288.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
Length = 786
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 275/544 (50%), Gaps = 63/544 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
A I+K +G ++I RA+ + + + E + E ++ ER++ E + + L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKL 550
Query: 572 HAEI 575
H E+
Sbjct: 551 HREL 554
>gi|425056404|ref|ZP_18459857.1| MutS domain V protein [Enterococcus faecium 505]
gi|403031896|gb|EJY43482.1| MutS domain V protein [Enterococcus faecium 505]
Length = 642
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYAGFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE IL+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQILAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|331086755|ref|ZP_08335832.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409921|gb|EGG89356.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 790
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 212/406 (52%), Gaps = 47/406 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+A+ A EI+ + E+D FA+ FA ++ PI + H
Sbjct: 246 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGH------ 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+I +HPLL + VPI + +
Sbjct: 300 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 325 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALATSIL YL +R +
Sbjct: 385 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 445 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
A+ ERL Q +L L RR +E + + A+ E+
Sbjct: 505 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREV 545
>gi|257439769|ref|ZP_05615524.1| MutS2 protein [Faecalibacterium prausnitzii A2-165]
gi|257197789|gb|EEU96073.1| MutS2 family protein [Faecalibacterium prausnitzii A2-165]
Length = 803
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 261/523 (49%), Gaps = 63/523 (12%)
Query: 18 EESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E + L QT A +L + P +E ++ ++ AV G +LS E+ V LR
Sbjct: 41 DEVRYALEQTDAINSLLIKNGSP-RFGGVEGVSSLVARAVKGGVLSMGELLMVAGALRNF 99
Query: 76 NNV--WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI---DCKLLIILDR 130
N+ W G S P +L LE++I I D + D
Sbjct: 100 QNLTSWY---------GSSEHDALPTDDLFYALAPQPGLEQQISSAILAPDA----MADT 146
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS L +R + + ++ L+ + + + + + +++ R R V +K+ ++ +
Sbjct: 147 ASHTLNELRKKIRATENSIRDRLESMVRNMDTSKYLQESVVSIRNGRYVVPVKSEYRGEV 206
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI +VSS+GAT F+EP+ VE N ++ E E IL TA++A E + +Y
Sbjct: 207 -SGIIHDVSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQY 265
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+LEID+ A+A A M P V DSS ++ +HPL+
Sbjct: 266 SYKAMLEIDVLLAKARLALDMKAFKP------SVRTDSSFSLIRARHPLI---------- 309
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K VP+DI + E ++ITGPNTGGKT ++KT
Sbjct: 310 -----DPKKC--------------------VPVDIALGKEYDSLIITGPNTGGKTVTLKT 344
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
GL M++ G +PA + FD L DIGD QS+EQ+LSTFSGH+ +I ILEL
Sbjct: 345 AGLLCAMAQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAM 404
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+LVL+DE+G+GTDP+EG ALA +I++ LR R L + TTHYA+L + NA+
Sbjct: 405 PHTLVLLDELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNAS 464
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
EF LETLRPTY++ G G SNA I++ +G ++I+ AQ+
Sbjct: 465 CEFDLETLRPTYKLSVGVPGKSNAFLISEKLGIPERVIEAAQQ 507
>gi|431122660|ref|ZP_19498357.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1613]
gi|430567605|gb|ELB06682.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1613]
Length = 642
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 257/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E+ I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEKAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKKGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|365924477|ref|ZP_09447240.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265357|ref|ZP_14767919.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394428189|gb|EJF00772.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 786
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 265/510 (51%), Gaps = 61/510 (11%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+ E+ AV + LRA N V + + LD ++++ S L EL + L E+ +++
Sbjct: 84 LNGKELAAVSKVLRATNEVRRFFVK---LDDEAIELAS-LDELAADLQVLPEVNKRLLTS 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRR 175
I+ + D AS L IR R++ ++ L+ + G K L IT R
Sbjct: 140 IEGDGHVT-DEASTALAGIR----RSIAAIEGQLRD-QLNVLVHGNSSKYLSDAVITIRN 193
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +K ++ G+ + S+SG T F+EPK VE NN + ++E E IL
Sbjct: 194 DRYVIPVKQEYRSHF-GGVVHDQSASGQTVFVEPKQIVELNNRLKQQQSNEKEEVARILR 252
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
L+ IA EI+ + + D A+A +A + P+LS+++ V + +
Sbjct: 253 ELSQLIAPYTTEIRQNVYLLGVFDFVNAKAQYAAQIKATEPLLSTENKVY------LRQV 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
HPLL +K+ V N DI + + R +V
Sbjct: 307 WHPLL----------------DMKAAVRN-------------------DIMLGDDYRAIV 331
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
+TGPNTGGKT ++KTLGL LM +AGL++PA R+ FD I ADIGD QS+EQ+LSTF
Sbjct: 332 VTGPNTGGKTITLKTLGLVQLMGQAGLFIPAFEESRIGIFDNIFADIGDEQSIEQSLSTF 391
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H++ IV IL + +SL+L DE+G+GTDP EG ALA SIL Y+ + + TTHY +
Sbjct: 392 SSHMTNIVSILSEIDDKSLILFDELGAGTDPQEGAALAISILDYVGSKSSYVMATTHYPE 451
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L + + NA+ EF +E+L+PTY +L G G SNAL+I+K +G D II +A++L
Sbjct: 452 LKAYGYERPQTINASMEFDIESLKPTYHLLLGIPGRSNALDISKKLGLDDVIIMQAKQLT 511
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQA 565
Q +++ Q L+ +R ++E ++
Sbjct: 512 -----AGQNQDLNDMIQDLVAKRHQVEEES 536
>gi|384044690|ref|YP_005492707.1| MutS2 family protein [Bacillus megaterium WSH-002]
gi|345442381|gb|AEN87398.1| MutS2 family protein [Bacillus megaterium WSH-002]
Length = 660
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 231/437 (52%), Gaps = 63/437 (14%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 164
L E+E+ I ID +LD AS+ L IR + + R E L+SL++ +AQ +
Sbjct: 3 LPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRSSSAQKMLSD 61
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
I +T R R + +K ++ GI + SSSGAT F+EP+ V NN L
Sbjct: 62 AI----VTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTLNN---ELQE 113
Query: 225 SEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
+++ E+ I L++ AE+A R+ YL+ E+D FA+ ++ + P +
Sbjct: 114 AKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSHELKASKPKM 170
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ + ++ + KHPL+ + DV
Sbjct: 171 NDRGYIKLVKA------KHPLIA-----------------QEDV---------------- 191
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
V DI++ + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + + F +
Sbjct: 192 --VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHV 249
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H+ IVDIL+ V ESLVL DE+G+GTDP EG ALA SIL
Sbjct: 250 FADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILD 309
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ +R V TTHY +L NA+ EF +ETL PTY++L G G SNA I+
Sbjct: 310 QVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEIS 369
Query: 519 KSIGFDRKIIQRAQKLV 535
K +G ++I+RA+ +
Sbjct: 370 KRLGLSAEVIERAKGYI 386
>gi|83815784|ref|YP_444790.1| MutS2 family protein [Salinibacter ruber DSM 13855]
gi|83757178|gb|ABC45291.1| MutS2 family protein [Salinibacter ruber DSM 13855]
Length = 819
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 242/500 (48%), Gaps = 35/500 (7%)
Query: 41 LSTIEDIAGILNSAV-SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
LS + D+ L A + P ++ A RRTL + + KK EA D Y L
Sbjct: 68 LSPMYDLRDALRRAAPEDAYVDPEDLMATRRTLVTLRRL-KKHFEARRED------YPRL 120
Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
+ + L +LEE I +D + I D AS +L +R + + E L + L K
Sbjct: 121 ADAVARATPLPDLEETIASILD-EDASIRDDASPELRRLRQQIRSKEEELRTTLDKALRH 179
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ G T R RM + ++AS K + +G + S+SG T ++EP +E NN
Sbjct: 180 AVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLELNNEV 238
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L ++E AE IL +T + I+ + + + DL A+A FA + V P L+
Sbjct: 239 RELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLN 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ HV EG L L R A T G S
Sbjct: 299 DEGHVEI-----YEGRNPVLQLHFERRDAGDA----------------TDGRASGEEEAL 337
Query: 340 P----VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
P VP+D+++ + R +VITGPN GGKT +MKT+GL SLM GL LP H P F
Sbjct: 338 PPREVVPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLF 397
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
D I+ADIGD QS+E +LSTFS H+S + +L V +LVLIDE G+GTDP EG ALA +
Sbjct: 398 DQIVADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGENALVLIDEAGTGTDPDEGAALAQA 457
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
+L+ L + + TTH+ L + EN + EF ETLRPT+R G G S A
Sbjct: 458 VLEQLTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAF 517
Query: 516 NIAKSIGFDRKIIQRAQKLV 535
IA+ +G ++ RA+ L
Sbjct: 518 EIARRMGLSGDLLDRARTLA 537
>gi|331092295|ref|ZP_08341123.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401727|gb|EGG81306.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 791
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 235/454 (51%), Gaps = 52/454 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS L+ IR + E + S L + + ++ + LIT R R C+ +KA +
Sbjct: 145 ISDDASSTLKHIRRSIQLLNERVHSTLTSLVSGSLKSY-LQDSLITMRGDRYCIPVKAEY 203
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ +P G+ + SS+G+T F+EP V+ NN L E E ILS L+ E +
Sbjct: 204 RSQVP-GMIHDQSSTGSTLFIEPMAIVKLNNDLKELYGKEQEEIQVILSRLSEEAGGYIQ 262
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E++ + E+D FA+ A M+ PI +++ + I+I +HPLL +
Sbjct: 263 ELRTNFAILTELDFIFAKGMLALSMNAGKPIFNTKGY------IHIREGRHPLLDKKKV- 315
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
VPI + + + ++++TGPNTGGKT
Sbjct: 316 ----------------------------------VPITLTLGGDFDLLIVTGPNTGGKTV 341
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
S+KT+GL +LM +AGL++PA + L F + ADIGD QS+EQ+LSTFS H++ IV L
Sbjct: 342 SLKTVGLFTLMGQAGLHIPALDRSELAVFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFL 401
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP+EG ALAT+IL +L R + TTHY++L
Sbjct: 402 KDVDEHSLVLFDELGAGTDPTEGAALATAILSHLHQRGIRTMATTHYSELKIFALSTEGV 461
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA EF +ETLRPTYR+L G G SNA I+ +G II A++ + +H
Sbjct: 462 ENACCEFDVETLRPTYRLLLGIPGKSNAFAISGKLGLPDYIIDEAKR-------QLSEHD 514
Query: 547 KS--ELYQSLMEERRKLESQARTAASLHAEIMDL 578
+S +L L E R+ +E + AS EI L
Sbjct: 515 ESFEDLLSDLEESRKTIEKERAEIASYKQEIQQL 548
>gi|255654753|ref|ZP_05400162.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-23m63]
gi|296449499|ref|ZP_06891276.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296878178|ref|ZP_06902193.1| exopolyphosphatase [Clostridium difficile NAP07]
gi|296261563|gb|EFH08381.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296430931|gb|EFH16763.1| exopolyphosphatase [Clostridium difficile NAP07]
Length = 792
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 270/519 (52%), Gaps = 50/519 (9%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +KA ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTTDSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTY++L G G SNA I++ +G +I RA++ +
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYI 512
>gi|167747774|ref|ZP_02419901.1| hypothetical protein ANACAC_02495 [Anaerostipes caccae DSM 14662]
gi|167653136|gb|EDR97265.1| MutS2 family protein [Anaerostipes caccae DSM 14662]
Length = 799
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 247/512 (48%), Gaps = 59/512 (11%)
Query: 26 QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
QT AL + Q + + D+ L LS E+ + L AV N +
Sbjct: 49 QTQDALTRLYKQGSISFFGVHDLGASLKRLKMKGTLSAGELLEIAGLLEAVKNALAYGAQ 108
Query: 85 AAEL-DGDSL----QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
++ D DSL + P+ LLK+ I CI I D AS L+ IR
Sbjct: 109 RDDMADADSLDSVFESLVPMDGLLKD----------IRHCI-ISPEEISDDASSALKDIR 157
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
K + + S L + + + L+T R R C+ +K ++ G+ + S
Sbjct: 158 RNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEYRGQFK-GMIHDQS 216
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG+T F+EP V NN L E E ILSLL+ + + + ++ +D
Sbjct: 217 SSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILSLLSEQASYDMDGLAQNQKLLVLLD 276
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FA+A +A+ +G PI D INI+ +HPLL +P K
Sbjct: 277 FIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL---------------DPKK 315
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPI++ + ++VITGPNTGGKT S+KT+GL +LM +
Sbjct: 316 --------------------VVPINVSLGDAFSMLVITGPNTGGKTVSLKTVGLFTLMGQ 355
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
AGL++PA L ++ + ADIGD QS+EQNLSTFS H++ IV I++ R SLVL+DE
Sbjct: 356 AGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSIIQNAHRHSLVLLDE 415
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+ GTDP EG ALA SIL L DR + TTHY++L ENA+ EF +ETL
Sbjct: 416 LCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTDGVENASCEFDVETLS 475
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
PTYR++ G G SNA I++ +G D II A
Sbjct: 476 PTYRLMIGIPGKSNAFAISRKLGLDNHIIVHA 507
>gi|294506640|ref|YP_003570698.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
gi|294342968|emb|CBH23746.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
Length = 819
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 246/496 (49%), Gaps = 27/496 (5%)
Query: 41 LSTIEDIAGILNSAV-SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
LS + D+ L A + P ++ A RRTL + + KK EA D Y L
Sbjct: 68 LSPMYDLRDALRRAAPEDAYVDPEDLMATRRTLVTLRRL-KKHFEARRED------YPRL 120
Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
+ + L +LEE I +D I D AS +L +R + + E L + L K
Sbjct: 121 ADAVARATPLPDLEETIASILDENA-SIRDDASPELRRLRQQIRSKEEELRTTLDKALRH 179
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ G T R RM + ++AS K + +G + S+SG T ++EP +E NN
Sbjct: 180 AVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLELNNEV 238
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L ++E AE IL +T + I+ + + + DL A+A FA + V P L+
Sbjct: 239 RELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLN 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ HV EG ++P+L L + + ++ E + +
Sbjct: 299 DEGHVEI-----YEG-RNPVL---QLHFEELGAGGATDRRASGEEEALPPREV------- 342
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VP+D+++ + R +VITGPN GGKT +MKT+GL SLM GL LP H P FD I+
Sbjct: 343 -VPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLFDQIV 401
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+E +LSTFS H+S + +L V +LVLIDE G+GTDP EG ALA ++L+
Sbjct: 402 ADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGESALVLIDEAGTGTDPDEGAALAQAVLER 461
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
L + + TTH+ L + EN + EF ETLRPT+R G G S A IA+
Sbjct: 462 LTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAFEIAR 521
Query: 520 SIGFDRKIIQRAQKLV 535
+G ++ RA+ L
Sbjct: 522 RMGLSGDLLDRARTLA 537
>gi|240146928|ref|ZP_04745529.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257200911|gb|EEU99195.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 808
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 226/442 (51%), Gaps = 56/442 (12%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++ +PL + ++ C L+E E I D AS L IR + + +
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ + + + +IT R R C+ +KA K +P G+ + SSSG+T F+EP
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL+ L+ A ++ + + E+D FA+A FAQ
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+GV P ++ D INI+ +HPLL +
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
L F+ + ADIGD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL L+ + TTHY++L + + ENA EF +E+L PTYR+L G G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500
Query: 511 DSNALNIAKSIGFDRKIIQRAQ 532
SNA I+ +G II+ A+
Sbjct: 501 KSNAFAISTKLGLSEDIIEDAK 522
>gi|423673678|ref|ZP_17648617.1| MutS2 protein [Bacillus cereus VDM062]
gi|401310543|gb|EJS15859.1| MutS2 protein [Bacillus cereus VDM062]
Length = 786
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 275/544 (50%), Gaps = 63/544 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
A I+K +G ++I RA+ + + + E + E ++ ER++ E + + L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKL 550
Query: 572 HAEI 575
H E+
Sbjct: 551 HREL 554
>gi|225026876|ref|ZP_03716068.1| hypothetical protein EUBHAL_01130 [Eubacterium hallii DSM 3353]
gi|224955800|gb|EEG37009.1| MutS2 family protein [Eubacterium hallii DSM 3353]
Length = 791
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 243/479 (50%), Gaps = 56/479 (11%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D + Y L + L L ++I CI + I D AS L+ IR E K+ ++
Sbjct: 110 DDIMAYDSLNSYFGELDSLEFLYQRITQCILSEDEIS-DDASSALKDIRREIKQTNISIH 168
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ L V + LIT R R CV +K ++ P G+ + SSSG+T F+EP
Sbjct: 169 NKLTSVINSQNNKTMLQDALITVRNGRYCVPVKTEYRNAFP-GMIHDQSSSGSTLFIEPM 227
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V+ NN L E E IL L+A+ A RE++ + ++D FA+A +A+
Sbjct: 228 AVVQLNNHLKELDIKEKMEIEKILQSLSAQAASCSRELEENQKILTKLDFIFAKAKYAKE 287
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
G PI ++ D ++I+ +HPLL +P K
Sbjct: 288 YQGTEPIFNT------DGIVDIKQGRHPLL---------------DPKKV---------- 316
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPI I + + ++++TGPNTGGKT S+KT+GL LM +AGL++PA
Sbjct: 317 ----------VPIHIYIGEDFNMLLLTGPNTGGKTVSLKTVGLFQLMGQAGLHIPAFQGS 366
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
RL F I ADIGD QS+E NLSTFS H++ +V IL+ SLVL+DE+ GTDP+EG
Sbjct: 367 RLAVFSDIFADIGDEQSIEMNLSTFSSHMTNLVHILDEADPNSLVLLDELCGGTDPTEGA 426
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA +IL L V TTHYA+L ENA EF LETL PTYR+L G G
Sbjct: 427 ALAIAILDDLHTGKIRTVATTHYAELKMYAMDTPGVENACCEFDLETLSPTYRLLIGIPG 486
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLV-------ERLRPERQQHR------KSELYQSLME 556
SNA +I++ +G II++A+ + E + E ++++ +SELY++ E
Sbjct: 487 KSNAFSISERLGLPDYIIEQARSQIDATAIDFENMLSELEKNKAEIEKEQSELYKTKQE 545
>gi|403389555|ref|ZP_10931612.1| clostridial MutS2-related protein [Clostridium sp. JC122]
Length = 628
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/550 (29%), Positives = 281/550 (51%), Gaps = 64/550 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL++ ++L++TS ++ + + L I +I + G L PS++ + LR
Sbjct: 39 SLKQVNRMLDETSQGRNLLDAGYHIPLEGIFNITNYIEKIEKGAALEPSDLTTISDFLRG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + + + Y+P L N + L+ +EE+I I + AS
Sbjct: 99 CRKVKIFIKDK--------EGYAPTLSAYGDNISDLSYIEEEINLSIKSNR--VDSNASR 148
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYL 189
+L+ IR R++E+ +S +++ + ++ I + I++R + + IKA++K
Sbjct: 149 ELKKIR----RHIESCESKIREKLEKFLKSSSNKNYIQEFFISERNGKFTIPIKAAYKNS 204
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ +G + S G T F+E ++ + L + E EE IL+LLT I + +E+K
Sbjct: 205 I-EGSIIETSPKGTTVFVELASIQKYTSELAVLKSEEDVEEYKILALLTNMIFEKIKELK 263
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + E D+ FA+A +++ ++GV P+++ + INI K+PLL S
Sbjct: 264 MNIDVISEYDMIFAKAKYSKSINGVKPLMNKNGY------INIVKGKYPLLKDS------ 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP+D + + R ++ITGPN GGKT +K
Sbjct: 312 -------------------------------VPLDCNIGKDFRTLIITGPNAGGKTVVLK 340
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +L ++G ++ AK+ + F+ + DIGD+QS+E LSTFS H+ + IL+L
Sbjct: 341 TIGLLTLAVQSGFHIAAKDGTEMAVFNKVFVDIGDNQSIENALSTFSSHVKNLAAILKLS 400
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ +L+L DEIGSGT+P+EG ALA SIL+ + + V +THY ++ FENA
Sbjct: 401 DKSTLLLFDEIGSGTEPNEGAALAISILEEFYHKGCITVASTHYGEIKNFSFNHPDFENA 460
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
A EF +TL P Y++ G +G+SNAL IA+ +G D+ +I+R ++ ++ R S+
Sbjct: 461 AMEFKCDTLEPLYKLQIGKSGNSNALYIAEKMGIDKPVIERTKEYIKNKNYNYDFLRSSK 520
Query: 550 LYQSLMEERR 559
+ ++ E +R
Sbjct: 521 IIKNEKEAKR 530
>gi|291535463|emb|CBL08575.1| MutS2 family protein [Roseburia intestinalis M50/1]
Length = 808
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 226/442 (51%), Gaps = 56/442 (12%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++ +PL + ++ C L+E E I D AS L IR + + +
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ + + + +IT R R C+ +KA K +P G+ + SSSG+T F+EP
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL+ L+ A ++ + + E+D FA+A FAQ
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+GV P ++ D INI+ +HPLL +
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
L F+ + ADIGD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL L+ + TTHY++L + + ENA EF +E+L PTYR+L G G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500
Query: 511 DSNALNIAKSIGFDRKIIQRAQ 532
SNA I+ +G II+ A+
Sbjct: 501 KSNAFAISTKLGLGEDIIEDAK 522
>gi|218233457|ref|YP_002369349.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus B4264]
gi|228960821|ref|ZP_04122456.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048260|ref|ZP_04193828.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|229129836|ref|ZP_04258802.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|229147111|ref|ZP_04275470.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|229152748|ref|ZP_04280932.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|296505027|ref|YP_003666727.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|423584921|ref|ZP_17561008.1| MutS2 protein [Bacillus cereus VD045]
gi|423631267|ref|ZP_17607014.1| MutS2 protein [Bacillus cereus VD154]
gi|423657494|ref|ZP_17632793.1| MutS2 protein [Bacillus cereus VD200]
gi|226723046|sp|B7HF67.1|MUTS2_BACC4 RecName: Full=MutS2 protein
gi|218161414|gb|ACK61406.1| MutS2 family protein [Bacillus cereus B4264]
gi|228630726|gb|EEK87371.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|228636360|gb|EEK92831.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|228653527|gb|EEL09399.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|228722985|gb|EEL74362.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|228798843|gb|EEM45822.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296326079|gb|ADH09007.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|401235113|gb|EJR41586.1| MutS2 protein [Bacillus cereus VD045]
gi|401263840|gb|EJR69956.1| MutS2 protein [Bacillus cereus VD154]
gi|401289050|gb|EJR94771.1| MutS2 protein [Bacillus cereus VD200]
Length = 786
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 283/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|423452167|ref|ZP_17429020.1| MutS2 protein [Bacillus cereus BAG5X1-1]
gi|401142238|gb|EJQ49787.1| MutS2 protein [Bacillus cereus BAG5X1-1]
Length = 786
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 275/544 (50%), Gaps = 63/544 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
A I+K +G ++I RA+ + + + E + E ++ ER++ E + + L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKL 550
Query: 572 HAEI 575
H E+
Sbjct: 551 HREL 554
>gi|334188381|ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
gi|332009066|gb|AED96449.1| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
Length = 796
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 304/599 (50%), Gaps = 62/599 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
+G +K +S ES KLL++T AA+ M++ S LDLS+I + + A
Sbjct: 72 LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 131
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
L + V LR N+ L A + DGD +R+ PL EL+ N +F+ +
Sbjct: 132 RLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLV 191
Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
E+ ID I D AS L R R+R ++ L+ L+++ I ++ D+ ++
Sbjct: 192 EQ----VIDPDG-TIKDSASSAL---RQSRER-VQTLERKLQQLLDAIIRSQKDDESVML 242
Query: 173 KRR--SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE- 229
R C I+ S L L S SG EP AV N+ +++ + + +A+
Sbjct: 243 AAEIDGRWC--IQMSSNQLTSVNGLLLSSGSGGGTAAEPIAAVSMND-DLQSARASVAKA 299
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP--ILSSQSHVSFD 287
E ILS+LT ++ +I+ ++ +++D+ ARA +++ G P L + V
Sbjct: 300 EAEILSMLTEKMQDGLCQIEVVLSYSIQLDVINARATYSRAYGGAHPDIYLPPEDEVESL 359
Query: 288 SS------INIEGIK---------------HPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
S+ IN+ K HPLLL + + K
Sbjct: 360 SAGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKGIRKTRETVKFHK------- 412
Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
T ++ G P+P D ++ TRV+VITGPNTGGKT +K++GLA++M+K+GLY+ A
Sbjct: 413 -TADTVLSGAP--PIPADFQISKGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLYVLA 469
Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL + SLVL+DE+G+GT+P
Sbjct: 470 TESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAGTNP 529
Query: 447 SEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
EG AL +IL+ + L + TTH+ +L LK ++ FENA EF L+PTY+IL
Sbjct: 530 LEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAFENACMEFDDLNLKPTYKIL 589
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-----HRKSELYQSLMEERR 559
WG G SNA+NIA +G II+ A++L E + R + YQ L+ E R
Sbjct: 590 WGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVILDMERYKQEYQRLLNESR 648
>gi|291537895|emb|CBL11006.1| Mismatch repair ATPase (MutS family) [Roseburia intestinalis XB6B4]
Length = 639
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 226/442 (51%), Gaps = 56/442 (12%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++ +PL + ++ C L+E E I D AS L IR + + +
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ + + + +IT R R C+ +KA K +P G+ + SSSG+T F+EP
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL+ L+ A ++ + + E+D FA+A FAQ
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+GV P ++ D INI+ +HPLL +
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
L F+ + ADIGD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL L+ + TTHY++L + + ENA EF +E+L PTYR+L G G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500
Query: 511 DSNALNIAKSIGFDRKIIQRAQ 532
SNA I+ +G II+ A+
Sbjct: 501 KSNAFAISTKLGLGEDIIEDAK 522
>gi|431740930|ref|ZP_19529839.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2039]
gi|430602565|gb|ELB40129.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2039]
Length = 642
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKKGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|417963813|ref|ZP_12605678.1| MutS2 protein [Candidatus Arthromitus sp. SFB-3]
gi|380331723|gb|EIA22709.1| MutS2 protein [Candidatus Arthromitus sp. SFB-3]
Length = 654
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 269/527 (51%), Gaps = 60/527 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF +++E + LN+TS A+ ++ S P D ++D+ L G +S EI +
Sbjct: 36 PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
TL+ + V L++ + + L Y N + LE+ I I D + I
Sbjct: 94 TTLKCIREVKDYLSKRS---LNYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 142
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +K
Sbjct: 143 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 200
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S I
Sbjct: 201 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 259
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 260 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 306
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ DV VP+++ + + ++ITGPNTGGKT ++
Sbjct: 307 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ + +
Sbjct: 339 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+ ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L EN
Sbjct: 399 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
A+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK +
Sbjct: 459 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKYL 505
>gi|293572245|ref|ZP_06683244.1| MutS2 family protein [Enterococcus faecium E980]
gi|291607704|gb|EFF37027.1| MutS2 family protein [Enterococcus faecium E980]
Length = 642
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|449438987|ref|XP_004137269.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 837
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 290/585 (49%), Gaps = 96/585 (16%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLS--TIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+ EES +LL++T+AA+ M + LDLS + + + A + +E A+
Sbjct: 97 TYEESLRLLDETNAAVEMHKHGGCSLDLSGVNLHLVKSAIEHAQRSLAMDGNEAIAIAAL 156
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL-IILDR 130
L+ + + L A + D D R+ PL ++ +G ++ L+ +IL+
Sbjct: 157 LQFADMLQFNLKTAIKEDVDWSTRFMPLTNVI------------MGMVVNQSLIKLILNA 204
Query: 131 ASEDLEL--------------IRAERKRNMENLDSLLK--KVAAQIFQAGGIDKPLITKR 174
ED + +R K+ + +DSL++ K + +D
Sbjct: 205 VDEDGSVKDSASYALRESRDQVRKLEKKLSQLMDSLVRSAKSGTSFLEVEIVD------- 257
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAI 233
R C IK+ L+ L S +G F+EP AV N+ E++ + + +A+ E +
Sbjct: 258 -GRWC--IKSEGDQLMDVKGLLLSSDAGIGSFIEPISAVPLND-ELQQARASVAKAEEDV 313
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL--------------- 278
L +LT ++ +I L+ ++E+D+ ARA + G CP L
Sbjct: 314 LFVLTEKVKMDFEDISKLIGCIIELDVVNARASYGLSFGGTCPNLVLLEGCNSSIANVCL 373
Query: 279 ----SSQSHVSFDSSI-NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
S SH+ + + ++ HPLLL +L A K DV+N+ +G
Sbjct: 374 SGDQSEASHLKKNEWVLYLQNTHHPLLLQQYRENLKNA-------KRDVKNAFNEMGRKP 426
Query: 334 KG------------ISDF-----------PVPIDIKVECETRVVVITGPNTGGKTASMKT 370
G IS F PV +D + +V+VITGPNTGGKT +KT
Sbjct: 427 PGGNMSWKEKEVIDISLFKMKVDQLEQARPVSVDFSISRRIKVLVITGPNTGGKTVCLKT 486
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GLA++M+K+GL++ A ++PWFD I ADIGD QSL Q+LSTFSGH+ +I DI + +
Sbjct: 487 IGLAAMMAKSGLHVLASESVQIPWFDSIFADIGDEQSLTQSLSTFSGHLRKISDIQSVST 546
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL+DE+G+GT+P EG AL S+L+ + + L + TTH+ +L LK + FENA
Sbjct: 547 SQSLVLLDEVGAGTNPLEGAALGMSLLESFAKSGAALTIATTHHGELKTLKYSNEVFENA 606
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
EF L+PTY+ILWG G SNA+NIA+ +G ++ A++L
Sbjct: 607 CMEFDEVNLKPTYKILWGIPGRSNAINIAERLGLPSSVVDDAREL 651
>gi|228993275|ref|ZP_04153191.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
gi|228766343|gb|EEM14986.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
Length = 786
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 274/557 (49%), Gaps = 84/557 (15%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q+ ++ + + + PL I DI + A G +LSP E+ + T+ +
Sbjct: 45 EMQETTDEAAKVIRLKGHVPL--GGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
I + S+SG T F+EP+ VE NN E R+ + E IL +LT E+A +
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILMVLTEEVALEADTVLAN 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ + +D FARA +A+ + PI++++ + +N+ +HPL+
Sbjct: 270 VEVIANLDFIFARAFYAKRIKATKPIVNNERY------MNLRQARHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+P + VP DI + + +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTV 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 349 GICVLMAQSGLHIPVLDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVYNRGARVVATTHYPELKAYGYNREQVINASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-------------------- 531
EF + TL PTY++L G G SNA I+K +G ++I RA
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDRARNHIGTDTNKIENMIAKLEE 528
Query: 532 -QKLVERLRPERQQHRK 547
QK ER E ++HRK
Sbjct: 529 SQKNAEREWNEAEEHRK 545
>gi|431738747|ref|ZP_19527689.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1972]
gi|430596860|gb|ELB34672.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1972]
Length = 642
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|431081425|ref|ZP_19495515.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1604]
gi|430565357|gb|ELB04503.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1604]
Length = 642
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKKGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|423470753|ref|ZP_17447497.1| MutS2 protein [Bacillus cereus BAG6O-2]
gi|402434491|gb|EJV66529.1| MutS2 protein [Bacillus cereus BAG6O-2]
Length = 786
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 275/544 (50%), Gaps = 63/544 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
A I+K +G ++I RA+ + + + E + E ++ ER++ E + + L
Sbjct: 491 AFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKL 550
Query: 572 HAEI 575
H E+
Sbjct: 551 HREL 554
>gi|375088406|ref|ZP_09734746.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
gi|374562444|gb|EHR33774.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
Length = 790
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 287/571 (50%), Gaps = 69/571 (12%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVN 76
QK ++T A +++ + L ++ EDI L G +LS EI + R + R +
Sbjct: 47 QKWQDETEDAAKLLRMKGGLPIAAFEDIKPHLKRLTIGGVLSEGEIVDIARVIKNSRELK 106
Query: 77 NVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +L E A EL L +L L LE KI ID + + D AS L
Sbjct: 107 QFFSQLKEEAIEL--------KQLYQLNDALYSLQSLERKIREVID-ESGTVSDDASPKL 157
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR K+ +++ L ++ + Q+ + +IT R +R + +KA + + G+
Sbjct: 158 RGIRTGIKQMEQSVRDKLDRIV-RGKQSRYLTDSIITIRNNRYVIPVKADSRAVF-GGVV 215
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SS+G T F+EP+ + NN + + E AE IL+ L+ IA EI+ + R+
Sbjct: 216 HDQSSTGQTLFIEPQSVLNLNNKLKQYRSEEQAEIDRILAELSELIAPHTNEIEANLRRL 275
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
++ D A+A +A+ +D P +S + S+++ G +HPL+
Sbjct: 276 VQFDFIQAKATYAKQLDASRP------EISENLSVSLIGARHPLIK-------------- 315
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+D V DI + + + +V+TGPNTGGKT +KTLGL
Sbjct: 316 ---------------------ADEVVANDIIIGEDYKAIVVTGPNTGGKTVILKTLGLMQ 354
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM +AGL++PA+ + F ADIGD QS+EQ+LSTFS H++ IV IL + +SL+
Sbjct: 355 LMGQAGLHIPAEQGSVIGLFTKWFADIGDEQSIEQSLSTFSSHMTNIVSILNQLDEKSLI 414
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP EG ALA ++L Y+ + ++T+HY +L + NA+ EF +
Sbjct: 415 LLDELGAGTDPQEGAALAIAMLDYIASQGSTVMITSHYPELKVYGYNRPQTINASMEFDV 474
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS 548
++L PTYR+L G G SNA IA+ +G II +Q+L V+ + + +Q RK
Sbjct: 475 DSLSPTYRLLLGVPGRSNAFEIARRLGLSEHIIASSQQLMSGESQSVDNMIGDLEQKRKE 534
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLY 579
Q+ ++L+ + A LH E+ D Y
Sbjct: 535 AEKQN-----KQLKQELYQATQLHNELKDFY 560
>gi|295105593|emb|CBL03137.1| MutS2 family protein [Faecalibacterium prausnitzii SL3/3]
Length = 804
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 255/499 (51%), Gaps = 68/499 (13%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
+E ++ + AV G +LS E+ V LR ++ W +E L D L Y+ E
Sbjct: 68 VEGVSQLAARAVKGGVLSMGELLMVAGALRNFQHLTSWYGSSEHDALPTDDL-FYALAPE 126
Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDL-EL---IRAERKRNMENLDSLLK 154
LE++I I D + D AS L EL IRA + L+S+++
Sbjct: 127 --------PGLEQQISSAILAPDA----MADTASRTLAELRKKIRATENSIRDRLESMVR 174
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + + +++ R R V +K+ ++ + GI +VSS+GAT F+EP+ VE
Sbjct: 175 NMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVE 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N ++ E E IL TA++A E + +Y +LEID+ A+A A +
Sbjct: 230 ANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDILLAKARLALELKAF 289
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P V DSS N+ +HPL+ +P K
Sbjct: 290 KPA------VRTDSSFNLIRARHPLI---------------DPQKC-------------- 314
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+DI + E ++ITGPNTGGKT ++KT GL M++ G +PA +
Sbjct: 315 ------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICV 368
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+DE+G+GTDP+EG ALA
Sbjct: 369 FDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAV 428
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+I++ LR R L + TTHYA+L + NA+ EF LETLRPTY++ G G SNA
Sbjct: 429 AIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNA 488
Query: 515 LNIAKSIGFDRKIIQRAQK 533
I++ +G ++I+ AQ+
Sbjct: 489 FLISEKLGIPSRVIEAAQQ 507
>gi|257900064|ref|ZP_05679717.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257837976|gb|EEV63050.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 642
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|342732204|ref|YP_004771043.1| recombination and DNA strand exchange inhibitor protein [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455611|ref|YP_005668206.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960547|ref|ZP_12603130.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-1]
gi|417964504|ref|ZP_12606221.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968357|ref|ZP_12609386.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-co]
gi|418372458|ref|ZP_12964550.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329659|dbj|BAK56301.1| recombination and DNA strand exchange inhibitor protein [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|346983954|dbj|BAK79630.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330812|gb|EIA21980.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-1]
gi|380339872|gb|EIA28540.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-co]
gi|380341143|gb|EIA29642.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-4]
gi|380342127|gb|EIA30572.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 783
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 269/527 (51%), Gaps = 60/527 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF +++E + LN+TS A+ ++ S P D ++D+ L G +S EI +
Sbjct: 36 PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
TL+ + V L++ + + L Y N + LE+ I I D + I
Sbjct: 94 TTLKCIREVKDYLSKRSL---NYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 142
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +K
Sbjct: 143 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 200
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S I
Sbjct: 201 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 259
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 260 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 306
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ DV VP+++ + + ++ITGPNTGGKT ++
Sbjct: 307 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ + +
Sbjct: 339 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+ ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L EN
Sbjct: 399 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
A+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK +
Sbjct: 459 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKYL 505
>gi|205374420|ref|ZP_03227217.1| recombination and DNA strand exchange inhibitor protein [Bacillus
coahuilensis m4-4]
Length = 766
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 194/613 (31%), Positives = 292/613 (47%), Gaps = 78/613 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLE+ L +T A +++ + L I +I L A G +L+ SE+ V T+ A
Sbjct: 21 SLEDVITLQEETDEAATVLRLKGHAPLGGIFNIRPQLKRAEIGGMLNASELVEVASTIYA 80
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ + + E +G L P+ L+ LT LE +I ID I LD AS
Sbjct: 81 -SRMIRAFEEQLSEEGVDL----PIFHGLISEMPILTGLEHEIKQSIDDNGEI-LDGASP 134
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR++R+ R E L+S+++ AQ + I +T R R + +K ++
Sbjct: 135 ALRSIRSQRRLTEGRVREKLESMVRSRNAQKMLSDAI----VTIRNDRYVLPVKQEYRGH 190
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSG T F+EP+ V+ NN L E E IL L+ +++ ++
Sbjct: 191 Y-GGIVHDQSSSGQTLFIEPESVVQLNNSLRELRVKEQTEIEKILLELSGRVSEVTEDLS 249
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+++ + ID F +A + + + G P ++ + + + +HPLL
Sbjct: 250 VIINHLAHIDFMFTKAKYGRSIKGTKPSMNDKGRIKLFKA------RHPLL--------- 294
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
GI + V DI + + +VITGPNTGGKT ++K
Sbjct: 295 -------------------------GIEE-AVANDIFLGEDFTTIVITGPNTGGKTVTLK 328
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+G+ +L+++AGL +PA + L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 329 TIGICTLLAQAGLPIPALDGSELAVFQSVYADIGDEQSIEQSLSTFSSHMVNIVDILDKV 388
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL DE+G+GTDP EG ALA SIL Y+ R V TTHY +L NA
Sbjct: 389 DFQSLVLFDELGAGTDPQEGAALAISILDYVYKRGARVVATTHYPELKAYGYNREGVVNA 448
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETLRPTYR+L G G SNA I+K +G +I A R+ +
Sbjct: 449 SVEFDVETLRPTYRLLLGVPGRSNAFEISKRLGLSDDVIDYA-----RVHIGTDSKQVEN 503
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSKVDFDAI 609
+ SL E +R E + A L L+R D ++ Y + +
Sbjct: 504 MIASLEESKRMAEKERMEANELLKSADKLHR-DLQKQTVEYYEKKDEL------------ 550
Query: 610 PNIDQCKDKGIHL 622
+D+ KDK I +
Sbjct: 551 --VDKAKDKAIKI 561
>gi|227510203|ref|ZP_03940252.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190408|gb|EEI70475.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 788
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/491 (33%), Positives = 247/491 (50%), Gaps = 61/491 (12%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R +R +N+ + D + + +++ +
Sbjct: 80 IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ I+ ILD AS +L IR R ++ S + K + G K
Sbjct: 131 PEITKRMVQSINDDG-SILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKY 184
Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
L IT R R + I+A +K GI + S+SG T ++EP VE NN R +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E AEE IL+ LT I E+ M+ V ++D A+A FA + V P +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIGAVQP------EIS 297
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
++ +N+ +HPL+ D V DI
Sbjct: 298 RENVVNLRRARHPLI-----------------------------------ARDKAVANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ R ++ITGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD
Sbjct: 323 QIGDGYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+E NLSTFS H+ I+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ +
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L + NA+ EF +ETLRPTYR L G G SNALNIA +G +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502
Query: 526 KIIQRAQKLVE 536
+II++A+ +
Sbjct: 503 EIIEKARAFTD 513
>gi|347534558|ref|YP_004841228.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504614|gb|AEN99296.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 785
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 264/528 (50%), Gaps = 67/528 (12%)
Query: 63 SEICAVRRTLRAVNNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
+++ AV + +N ++ L TE EL L E +K + L E+ ++ +D
Sbjct: 90 AQVSAVLNAILVINRFFENLETEKVEL--------HVLYEEVKTFSNLPEITVQLKKSVD 141
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
I LD AS L IR + R N+ S ++ Q+ + P+IT R R +
Sbjct: 142 DSGKI-LDSASGTLSSIRRQISRLEGNIKSKMESFT-HGKQSKYLSDPIITIRDDRYVIP 199
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KA +K + GI + S+SG T ++EP V NN R +E EE IL+ L+ I
Sbjct: 200 VKAEYKQKI-GGIVHDQSTSGQTIYLEPASVVGLNNDLRREQINEREEEKRILAQLSDLI 258
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E+ ++ DL A+A +A M P +S D+ +N++ +HPL+
Sbjct: 259 RPYQMELLSNAKQLGHFDLINAKARYAASMKATRP------EISADNQVNLKNARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
N E VG+ DIK+ + R ++ITGPNT
Sbjct: 312 ----------------------NQEKVVGN------------DIKLGFDYRQIIITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +MKTLGL LM+++GL++ A + +D + ADIGD QS+EQNLSTFS HI
Sbjct: 338 GGKTITMKTLGLLQLMAQSGLFITADEGSQAGLYDEVFADIGDDQSIEQNLSTFSSHIDN 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ IL+ ++ SLVLIDE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 398 IISILKRMTNRSLVLIDELGAGTDPREGAALAMSILDAISQSDAEVLSTTHYPELKVYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER---- 537
NA+ EF +TL PTYR++ G G SNAL+IA +G + II A+ LV+
Sbjct: 458 NRPETINASMEFDEKTLSPTYRLMIGIPGQSNALSIAGRLGLNESIIMEAESLVDEDSQD 517
Query: 538 ----LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
++ QQ + ++ + RKLE + + LH E+ + + +
Sbjct: 518 INSMIKKLTQQTKAAD------DRARKLEVELKIVTELHQELTEKFNQ 559
>gi|423374704|ref|ZP_17352042.1| MutS2 family protein [Bacillus cereus AND1407]
gi|401093992|gb|EJQ02078.1| MutS2 family protein [Bacillus cereus AND1407]
Length = 633
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 293/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIANTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
NM+++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAIEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ +++ +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMLNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA++ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYMENKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|160945171|ref|ZP_02092397.1| hypothetical protein FAEPRAM212_02690 [Faecalibacterium prausnitzii
M21/2]
gi|158442902|gb|EDP19907.1| recombination and DNA strand exchange inhibitor protein
[Faecalibacterium prausnitzii M21/2]
Length = 804
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 252/499 (50%), Gaps = 68/499 (13%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
+E ++ + AV G +LS E+ V LR ++ W G S P +
Sbjct: 68 VEGVSQLAARAVKGGVLSMGELLMVAGALRNFQHLSSWY---------GSSEHDAMPTDD 118
Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDL-EL---IRAERKRNMENLDSLLK 154
L LE++I I D + D AS L EL IRA + L+S+++
Sbjct: 119 LFYALAPEPGLEQQISSAILAPDA----MADTASRTLAELRKKIRATENSIRDRLESMVR 174
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + + +++ R R V +K+ ++ + GI +VSS+GAT F+EP+ VE
Sbjct: 175 NMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVE 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N ++ E E IL TA++A E + +Y +LEID+ A+A A +
Sbjct: 230 ANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDILLAKARLALELKAF 289
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P V DSS N+ +HPL+ +P K
Sbjct: 290 KPA------VRTDSSFNLIRARHPLI---------------DPQKC-------------- 314
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+DI + E ++ITGPNTGGKT ++KT GL M++ G +PA +
Sbjct: 315 ------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICV 368
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+DE+G+GTDP+EG ALA
Sbjct: 369 FDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAV 428
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+I++ LR R L + TTHYA+L + NA+ EF LETLRPTY++ G G SNA
Sbjct: 429 AIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNA 488
Query: 515 LNIAKSIGFDRKIIQRAQK 533
I++ +G ++I+ AQ+
Sbjct: 489 FLISEKLGIPSRVIEAAQQ 507
>gi|339448753|ref|ZP_08652309.1| MutS2 protein [Lactobacillus fructivorans KCTC 3543]
Length = 785
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 268/520 (51%), Gaps = 50/520 (9%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+ +E+ V L A V T A LD D ++ + L + K+ N L E+ +++
Sbjct: 84 LNGTELSQVNAVLLASKRVR---TFFANLDDDKVE-LNVLYDEAKDFNDLPEISKRLQAS 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
ID + LD AS +L IR E R N+ + + K Q+ + +P+IT R R
Sbjct: 140 IDEDGRV-LDSASSELRSIRREITRLETNIKTTMNKYI-HGKQSKYLSEPIITVRDGRYV 197
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K+ K GI + S+SG T ++EP+ V NN R E E ILS L+
Sbjct: 198 IPVKSEDKQKF-GGIVHDQSTSGLTLYIEPQSVVSSNNDLRRSQLDERKEIHKILSELSD 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
I + E+ ++ DL A+A FA M P +S ++HV N++ ++HPL
Sbjct: 257 MIRPYQEELMENAAQLGHFDLINAKAKFADQMHATKPSVSKENHV------NLKNVRHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + + VG+ DI++ + R ++ITGP
Sbjct: 311 I-----------------------DQKKVVGN------------DIQIGSDFRQIIITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLG+ LM+++G+++ A ++ FD + ADIGD QS+E NLSTFS H+
Sbjct: 336 NTGGKTITIKTLGINQLMAQSGIFVMANEGSQVGVFDNVFADIGDEQSIEANLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+++IL+ ++ +SL+LIDE+G+GTDP EG ALA SIL + + + TTHY +L
Sbjct: 396 DNLINILKHITNQSLILIDELGAGTDPKEGAALAMSILDKMGESGSEVLATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
N++ EF +TL+PTYR+L G G SNALNIAK +G II A L++
Sbjct: 456 GYNRPETINSSMEFDEKTLKPTYRLLLGVPGQSNALNIAKRLGLPDTIISEASSLMDSDS 515
Query: 540 PE--RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
+ R + ++ + E RKL+ + LHA++ D
Sbjct: 516 QDINRMIKQLTKQTKDADERARKLKVELAENERLHADLND 555
>gi|320162401|ref|YP_004175626.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
gi|319996255|dbj|BAJ65026.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
Length = 808
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 289/577 (50%), Gaps = 69/577 (11%)
Query: 15 KSLEESQKLLNQTSAA-LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+ LEE+Q+L TS A L + + + + DI ++ A +L P+E+ A++ TL
Sbjct: 38 RRLEEAQRLQKITSEARLLLSLNSEIGVGGASDIRPLVERAARHGVLEPAELLAIKDTLI 97
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI-----IL 128
+ + + SL+R LL L G ++ IL
Sbjct: 98 SARTIAR-----------SLERKESTFPLL--AEIAAPLVPPPGLIETISRVVSERGEIL 144
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D ASE L +R E K E L + L+ + A + LIT+R R + ++A K
Sbjct: 145 DSASETLARLRREVKVAFERLMTRLEHMVNDPRIAPMLQDSLITQRNGRYVIPLRAEFKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKS 244
+ I + SSSGAT F+EP V+ NN +++R+ + EE IL+ L+ ++
Sbjct: 205 QV-RSIIHDQSSSGATLFVEPLAVVDLNNEWHELQLRVRD----EERRILAELSDQVGAH 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ L + + D A A A +A+ + P+L H + HP GS+
Sbjct: 260 FEALAALTEALARFDFALACAKYAEDLRASEPVLVRYRHPARPD--------HP---GST 308
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+R + A +P TV VPID+ ++ +T VVITGPNTGGK
Sbjct: 309 IRLIQARHPLLDP---------QTV-----------VPIDVDLDEDTFCVVITGPNTGGK 348
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL +LM+++GL++PA++ L F+ + ADIGD QS+EQ+LSTFSGHI I
Sbjct: 349 TVTLKTVGLLALMAQSGLHIPARSGSELSVFENVFADIGDEQSIEQSLSTFSGHIKNISR 408
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL + +LVL DE+G+GTDP EG ALA +IL ++ ++ ++ THY +L
Sbjct: 409 ILRRANTHTLVLFDELGAGTDPQEGAALARAILAHMVEKRIPCLIATHYPELKIFAHNTP 468
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 541
NA+ EF L TLRPTY + G G SNAL IA +G D II++A+ + E LR E
Sbjct: 469 GVINASMEFDLNTLRPTYHLTLGLPGRSNALAIASRLGLDPVIIEKARAEISPEELRAEN 528
Query: 542 ------RQQHRKSELYQSLMEERRKLES-QARTAASL 571
RQ+ + +E+R++E +A AA L
Sbjct: 529 LLNEIHRQRDAARRARERAEKEQREVERLRAELAARL 565
>gi|78044071|ref|YP_360393.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756755|sp|Q3ABU1.1|MUTS2_CARHZ RecName: Full=MutS2 protein
gi|77996186|gb|ABB15085.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
Z-2901]
Length = 777
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 293/592 (49%), Gaps = 78/592 (13%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KLL + L+ ++ + +DLS + D + I +L+ EI + + L+ + +
Sbjct: 45 EKLL-EVEEGLSYLRFKTVDLSVLSDFSEIFLKLSKESMLTGQEIYRLGQLLKVSKDTFF 103
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI--GFCIDCKLLIILDRASEDLELI 138
+++ A + L +++K F L + I F + + D AS +L+ I
Sbjct: 104 EISRGA---------FPRLKQIVKLLFFDEALVKDIERSFWPEG---TVKDEASPELKRI 151
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + R + + ++K + A + +PLI+ R R + +KAS+K +P GI +
Sbjct: 152 RGQIARLKDKMREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYKSQVP-GIIHDR 210
Query: 199 SSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
S++G T F+EP AVE N + L EI E+ IL T +A + EIK + +
Sbjct: 211 SNTGQTLFIEPYSAVEAGNELKTLELQEKEIIEK--ILKDFTQRLACNLTEIKRTYELLG 268
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
EIDL A+A A +D P +S +SF + +HPLL +
Sbjct: 269 EIDLIVAKARLALELDAYKPRISENGVLSFKQA------RHPLLGKKA------------ 310
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP D+ + E +++ITGPNTGGKT ++KT+G+ ++
Sbjct: 311 ------------------------VPFDLTLGKEFDLLIITGPNTGGKTVTLKTIGILTI 346
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + F + DIGD QS+ Q+LSTFS H+ + ILE LVL
Sbjct: 347 MARAGLFIPASPETEIGLFGEVYVDIGDEQSIVQSLSTFSSHLLNLKFILENAREGDLVL 406
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA +IL+ LR + V TTH ++L+ + R ENA+ EF E
Sbjct: 407 LDELGTGTDPREGAALAKAILEELRGKKVKVVATTHTSELAAYAIETERVENASVEFDPE 466
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-----------KLVERLRPERQQH 545
+L+PTYR+ G G SNAL IA+ +G +II++A+ KL+ + E++Q
Sbjct: 467 SLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEKAKSFLKEEELKLDKLIFDVEQEKRQL 526
Query: 546 RKSE-----LYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYR 592
K++ L SL E+ KL + EI+ YRE + + R
Sbjct: 527 EKAKEEVANLLISLKEKEAKLNDELENLEKTKEEIIRKYREKYQQKLLEIER 578
>gi|429766463|ref|ZP_19298727.1| MutS domain V protein [Clostridium celatum DSM 1785]
gi|429184454|gb|EKY25470.1| MutS domain V protein [Clostridium celatum DSM 1785]
Length = 628
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 276/542 (50%), Gaps = 66/542 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
+G A++ K + P +L+ + L++TS ++ S + L I ++ + G
Sbjct: 26 LGKALIDKLE-P-SNNLKIVNRRLDETSEGRRLLDASYHIPLVGIFNVVPYIEKIEKGAS 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L P ++ + LR V K + E +L Y ++ L+ +EE+I C
Sbjct: 84 LDPEDLAIMSDFLRGCRKV-KLFIKDKEGYAPTLSSYG------ESITDLSYIEEEINRC 136
Query: 120 IDCKLLIILDRASEDLELIR-----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
I I+ AS++L+ IR E K E LD LK + + I + I+KR
Sbjct: 137 IRGS--IVDSNASKELKKIRRLIDDCENKIK-EKLDKFLKNSENKQY----IQEFFISKR 189
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
+ + IK+S+K + G + SS G T FMEP + + L E EE IL
Sbjct: 190 NGKYTIPIKSSYKNYV-QGTIVESSSKGTTVFMEPTTISKHTSELAILKVEESMEEYKIL 248
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+LT + + REIK ++ + E D+ +A+A ++ ++G+ P L+ ++ ++G
Sbjct: 249 GMLTEMLNEKIREIKINIEVIAEYDMIWAKAKYSNDINGIKPKLNEYGYIKI-----VDG 303
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
K+PLL PVP++ ++ + R +
Sbjct: 304 -KYPLLKN-------------------------------------PVPLNFEIGNDYRAL 325
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPN GGKT +KT+G+ +L +++G ++PAK + F+ I DIGD+QS+E LST
Sbjct: 326 IITGPNAGGKTVVLKTVGILTLATQSGFHIPAKEGTEISVFNKIFVDIGDNQSIENALST 385
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ + DI++ S+ +L+L DEIGSGT+P+EG ALA +IL+ L + + + TTHY
Sbjct: 386 FSSHVKNLADIIKQSSKSTLLLFDEIGSGTEPNEGAALAIAILEELYHKGCITIATTHYG 445
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
++ ++ FENAA EF +TL P Y++ G +GDSNAL I+K +G II++ +K
Sbjct: 446 EIKNFSEEHPHFENAAMEFKKDTLEPLYKLHIGRSGDSNALYISKRMGISDSIIEKTKKY 505
Query: 535 VE 536
+E
Sbjct: 506 IE 507
>gi|384182359|ref|YP_005568121.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324328443|gb|ADY23703.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 264/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I++A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQAR 509
>gi|423484112|ref|ZP_17460802.1| MutS2 protein [Bacillus cereus BAG6X1-2]
gi|401139138|gb|EJQ46701.1| MutS2 protein [Bacillus cereus BAG6X1-2]
Length = 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/499 (33%), Positives = 255/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + E +G L P+L
Sbjct: 65 LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMVE-NGVEL----PIL 119
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ L +LE+KI CI + LD AS+ L IR + R E L+S+ +
Sbjct: 120 VGHVAQIISLYDLEKKITNCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLESMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILERADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|403668407|ref|ZP_10933682.1| MutS2 protein [Kurthia sp. JC8E]
Length = 789
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 184/569 (32%), Positives = 279/569 (49%), Gaps = 62/569 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+LEE Q LL + L++++ + + + I DI A G +LSP E+ + T+RA
Sbjct: 40 TLEEVQSLLEEMDEGLSILRIKGSVPMGGIFDIRPHARRAQIGGILSPKELMEISSTIRA 99
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCKLLIILDRASE 133
+ ++++ E E D + PL K LT L+ +I CID + +D AS+
Sbjct: 100 -SRIFREFIEVIEADNEI---EIPLFIAKKEELPILTGLQHEINSCIDDNAKV-MDSASQ 154
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L SL + AA A + +IT R R + +KA ++
Sbjct: 155 ALRGIRTQLRTQEGRVRDRLASLTRGSAA----AKMLSDSIITLRNDRFVIPVKAEYRSH 210
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
G+ + S+SG T ++EP V+ NN L E AE IL L++++ + +
Sbjct: 211 Y-GGVIHDQSASGQTLYIEPDAVVQANNEIQNLKVKEKAEIDRILLELSSKVQEVAHSLF 269
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
L+ + ID+ A+A + Q PI++ + ++ + +HPLL
Sbjct: 270 VLVQILAAIDVVLAKAKYGQANKCTMPIMNDRGYMKLTKA------RHPLL--------- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D E + V DI+ + +V+TGPNTGGKT S+K
Sbjct: 315 -----------DAETA---------------VANDIEFGDDITTIVVTGPNTGGKTVSLK 348
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM++AGL +PA + L F + ADIGD QS+EQ+LSTFS H+ IV+IL+
Sbjct: 349 TIGLCTLMAQAGLPIPALDGSELSVFTQLFADIGDEQSIEQSLSTFSSHMVNIVEILKQF 408
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA
Sbjct: 409 DDRSLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVINA 468
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF+++TL PTYR+L G G SNA I+K +G II+ ++ + H
Sbjct: 469 SMEFNVDTLSPTYRLLIGVPGRSNAFEISKRLGLPEHIIEASKAFT-----GTETHEVES 523
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDL 578
+ SL R + E A A L E +L
Sbjct: 524 MIASLETSRLEAEKDAEETARLLEEANEL 552
>gi|418016394|ref|ZP_12655959.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506729|gb|EGX29023.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
Length = 801
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 268/525 (51%), Gaps = 60/525 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF +++E + LN+TS A+ ++ S P D ++D+ L G +S EI +
Sbjct: 54 PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 111
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
TL+ + V L++ + + L Y N + LE+ I I D + I
Sbjct: 112 TTLKCIREVKDYLSKRSL---NYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 160
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +K
Sbjct: 161 DFASDNLFKIRKELKSKTASIKRKLSEILKTYSKY--LQENVFTVRGDRYCIPVKSEYKS 218
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S I
Sbjct: 219 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 277
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 278 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 324
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ DV VP+++ + + ++ITGPNTGGKT ++
Sbjct: 325 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 356
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ + +
Sbjct: 357 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 416
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+ ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L EN
Sbjct: 417 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 476
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
A+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 477 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQK 521
>gi|257893780|ref|ZP_05673433.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257830159|gb|EEV56766.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
Length = 642
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|229093646|ref|ZP_04224746.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
gi|228689733|gb|EEL43540.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
Length = 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 264/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I++A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQAR 509
>gi|317498567|ref|ZP_07956860.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894054|gb|EFV16243.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 800
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 261/523 (49%), Gaps = 63/523 (12%)
Query: 60 LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L E+ + R L +V N V + +L+ DSL EL ++ L +L +I
Sbjct: 84 LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CI + I D AS L+ IR K+ + + + L + + + ++T R R
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
C+ +K ++ G+ + S+SG T F+EP V NN L E +E ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+ + ++ + ++ +D FA+A +A+ +D PI D INI+ HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VPI++ + + ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA------- 531
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A
Sbjct: 455 FALSTNDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514
Query: 532 ----QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
+ ++ L +Q K + + ++E R+++E+ R+ S
Sbjct: 515 VKDFETILADLEKSKQTIEKEQ--EEILEYRKEIETLRRSLKS 555
>gi|423640379|ref|ZP_17615997.1| MutS2 protein [Bacillus cereus VD166]
gi|401281295|gb|EJR87208.1| MutS2 protein [Bacillus cereus VD166]
Length = 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 282/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAETLRKQSEKLHRE 553
>gi|423411664|ref|ZP_17388784.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|423432549|ref|ZP_17409553.1| MutS2 protein [Bacillus cereus BAG4O-1]
gi|401104989|gb|EJQ12957.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|401115682|gb|EJQ23529.1| MutS2 protein [Bacillus cereus BAG4O-1]
Length = 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 268/521 (51%), Gaps = 63/521 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
I + S+SG T F+EP+ VE NN E R+ + E IL +LT E+A +
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILLMLTEEVAVEADIVLSN 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 270 VEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+P + VP +I + + +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTV 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 349 GICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF + TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|297544938|ref|YP_003677240.1| MutS2 family protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296842713|gb|ADH61229.1| MutS2 family protein [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 791
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 224/412 (54%), Gaps = 51/412 (12%)
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ +P+IT R+ R V +K ++ GI + SSSGAT F+EP V+ NN ++
Sbjct: 185 LQEPIITVRQGRYVVPVKQEYRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELK 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E IL L+ E+ K + + ++ V E+D FA+A ++ + V P L++ +
Sbjct: 244 ERQEIQRILFELSQEVKKYAQALFNDIEIVSELDFTFAKAKYSLKLKAVRPELNTMGY-- 301
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
IN++ +HPL+ N E V PIDI
Sbjct: 302 ----INLKKARHPLI-----------------------NQEAVV------------PIDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ + +VITGPNTGGKT ++KT+GL ++M+ AGL +PA+ ++ F+ I DIGD
Sbjct: 323 YIGDQFNTLVITGPNTGGKTVTLKTVGLLTIMAMAGLNIPAEEGSQVSIFEEIFVDIGDE 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ I+ +L+ V++ L L+DE+G+GTDP EG ALA SIL L
Sbjct: 383 QSIEQSLSTFSSHMTNIISMLQKVNKNCLALLDELGAGTDPVEGAALAMSILDTLHKIGA 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L K ENA+ EF +ETL+PTY+++ G G SNA IAK +G R
Sbjct: 443 KTIATTHYSELKQYALKTAGVENASVEFDVETLKPTYKLIIGLPGKSNAFEIAKRLGLPR 502
Query: 526 KIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+II+ A+K + E L+ E ++ + +RR+LE A L +
Sbjct: 503 QIIEDARKYISGEALKFE-------DIIADVENKRRELEKANHEVAFLRKNV 547
>gi|163846758|ref|YP_001634802.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
gi|163668047|gb|ABY34413.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
Length = 823
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 266/536 (49%), Gaps = 71/536 (13%)
Query: 27 TSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
T+ A +++ P + + D+ + A G +L + + + TL++ + ++L+
Sbjct: 56 TAEARLLLEEWPEVSIGGARDVRRAVQHAARGGILDGTTLREIAATLQSAALLRQRLSR- 114
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK 143
LD +R+ L++L + L E I I D + +LD AS L +R E +
Sbjct: 115 --LD----ERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHEVR 165
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
L L+ + AG + +P+IT R R + +KASH+ + G+ + S SGA
Sbjct: 166 VAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGSGA 224
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T ++EP VE NN L ++E E ILS L+ ++ + I ++ + +DLAFA
Sbjct: 225 TLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLAFA 284
Query: 264 RAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A +A P + S + + + +HPLL ++
Sbjct: 285 LARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV--------------- 329
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
VPID+ + E +++ITGPNTGGKT ++KT GL +LM++A
Sbjct: 330 --------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMAQA 369
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------- 431
G+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 370 GMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSESD 429
Query: 432 ----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
+LVL DE+G+GTDP EG ALA +I+ L + L + TTHYA+L
Sbjct: 430 AYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAFAY 489
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+NA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A+ ++R
Sbjct: 490 TTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFIDR 545
>gi|206969500|ref|ZP_03230454.1| MutS2 family protein [Bacillus cereus AH1134]
gi|229072054|ref|ZP_04205263.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|229081805|ref|ZP_04214297.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|229180871|ref|ZP_04308206.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|229192752|ref|ZP_04319710.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|365158667|ref|ZP_09354859.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|206735188|gb|EDZ52356.1| MutS2 family protein [Bacillus cereus AH1134]
gi|228590591|gb|EEK48452.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|228602428|gb|EEK59914.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|228701393|gb|EEL53887.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|228710988|gb|EEL62954.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|363626540|gb|EHL77523.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
Length = 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 285/570 (50%), Gaps = 68/570 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
I + S+SG T F+EP+ VE NN E R+ + E IL +LT E+A +
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILLMLTEEVAVEADIVLSN 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 270 VEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+P + VP +I + + +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTV 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 349 GICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF + TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMI 523
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 524 AKLEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|332653476|ref|ZP_08419221.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332518622|gb|EGJ48225.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 789
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 288/561 (51%), Gaps = 62/561 (11%)
Query: 17 LEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
L++ Q+ +TSAA+ M+ + P LS ++ + IL+ A G L+ E+ V LR
Sbjct: 43 LDDVQRAQEETSAAVKMLVLRGSP-GLSGVKPVGAILHRADMGGSLNTRELLEVAAVLRC 101
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
A+ GDS ++ +P+ L LE+ I I + + D AS +
Sbjct: 102 ART--------AKEYGDSEEK-TPISHLFHALTPNRFLEDTITNSIVGEDELA-DSASSE 151
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +L+K+ + Q+ + + +IT R R V +K+ HK +P G+
Sbjct: 152 LASIRRHMRATEAKVRDILQKLISS-NQSKYLQESIITIRSDRYVVPVKSEHKNAIP-GL 209
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+VS+SG+T+F+EP G V+ NN L E E IL+ L+A+ A + +I
Sbjct: 210 VHDVSASGSTFFIEPMGVVKANNELRELLAKEKKEIERILAELSAQCAAHKEDILEDYQL 269
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ +D FAR + M+G P LS D + + +HPLL
Sbjct: 270 LVWLDGIFARGQLSLKMEGSQPKLS-------DKYLRLRKARHPLL-------------- 308
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
D + + VP D+++ ++ITGPNTGGKT ++KT+GL
Sbjct: 309 ------DKKKA---------------VPNDLELGDTFDTLMITGPNTGGKTVTLKTIGLI 347
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++ GL++PA + FD +L+DIGD QS+ Q+LSTFS H++ IV ILE +L
Sbjct: 348 TLMAQCGLHIPAGADSTVRIFDRVLSDIGDEQSIAQSLSTFSSHMTNIVGILEEADDRTL 407
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP EG ALA +I++ R TTHYA+L ENA+ EF+
Sbjct: 408 ILLDELGAGTDPVEGAALAAAIIESARGMGAAVAATTHYAELKVYAMTTPGVENASCEFN 467
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR++ G G SNA I++ +G II++A R + + R ++ L
Sbjct: 468 VETLAPTYRLILGIPGKSNAFAISRRLGLPEYIIEKAAA-----RLDAENVRFEDVLTRL 522
Query: 555 MEERRKLESQARTAASLHAEI 575
++R+++E++ A L E+
Sbjct: 523 DQQRQEMEAERAEAKRLKLEM 543
>gi|423400603|ref|ZP_17377776.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|423457214|ref|ZP_17434011.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|423478688|ref|ZP_17455403.1| MutS2 protein [Bacillus cereus BAG6X1-1]
gi|401148991|gb|EJQ56474.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|401655327|gb|EJS72861.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|402426719|gb|EJV58834.1| MutS2 protein [Bacillus cereus BAG6X1-1]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|414160430|ref|ZP_11416698.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878328|gb|EKS26213.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
Length = 782
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 279/546 (51%), Gaps = 61/546 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R ++ V N +K L+ + Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGSMLNVRELNQIKRLIQ-VQNQYKTFYSQL-LEEEEAINYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + L++L ++I C + D AS +L+ IR+ +R +NLD ++K
Sbjct: 123 ERMTQLPILSDLYQEIKQ--KCDAYDLFDDASYELQSIRSRIHSTSQRIKQNLDRVVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + +IT R R + +KA ++ +GI + SSSG T ++EP VE N
Sbjct: 181 SNQ----KKLSDLIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSAVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E AE IL+ LT E+A E + + + V+ +ID A+A + + G
Sbjct: 236 NKISRLRNDEKAEVERILTELTLEVA-GEADACLIAESVMGQIDFLTAKARYGSSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + V + HPLL +P K+ V N+ V +
Sbjct: 295 PEFTEERKVYLPKAF------HPLL---------------DP-KTVVANTIEFVDGI--- 329
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 330 ----------------QTVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSKLGVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
D + DIGD QS+EQ+LSTFS H+ IV+IL+ S++L DE+G+GTDPSEG ALA S
Sbjct: 374 DNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSVILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++ R L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDNVQKRGALVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+ +G + KII+ A+ ++ + + + + SL + +++++Q L E
Sbjct: 494 EISSKLGLNGKIIRDAKAMI-----GQDEQEINNMIASLEKNTKRVDNQRIELEQLLREA 548
Query: 576 MDLYRE 581
DL+R+
Sbjct: 549 QDLHRQ 554
>gi|402555327|ref|YP_006596598.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
gi|401796537|gb|AFQ10396.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 264/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I++A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQAR 509
>gi|423615062|ref|ZP_17590896.1| MutS2 protein [Bacillus cereus VD115]
gi|401261918|gb|EJR68069.1| MutS2 protein [Bacillus cereus VD115]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L R NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNRERVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|228923296|ref|ZP_04086584.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582763|ref|ZP_17558874.1| MutS2 protein [Bacillus cereus VD014]
gi|423634569|ref|ZP_17610222.1| MutS2 protein [Bacillus cereus VD156]
gi|228836250|gb|EEM81603.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401211578|gb|EJR18325.1| MutS2 protein [Bacillus cereus VD014]
gi|401280548|gb|EJR86468.1| MutS2 protein [Bacillus cereus VD156]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 265/519 (51%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|431762915|ref|ZP_19551468.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3548]
gi|430622609|gb|ELB59319.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3548]
Length = 642
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMTFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|229175259|ref|ZP_04302774.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
gi|228608091|gb|EEK65398.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIISLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVINQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|304385591|ref|ZP_07367935.1| DNA mismatch repair protein MutS2 [Pediococcus acidilactici DSM
20284]
gi|304328095|gb|EFL95317.1| DNA mismatch repair protein MutS2 [Pediococcus acidilactici DSM
20284]
Length = 636
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 256/512 (50%), Gaps = 55/512 (10%)
Query: 26 QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T A +++S Q + L ++ I ++N G +L+P+E+ LR+ N + KK E
Sbjct: 50 ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+L +YS L + T EE I +D +LD AS DL R + K
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEEHIYQKVDD--YEVLDDASRDLRKARRQFKT 160
Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
+ + L K I LI +++ + V IKAS+K+ +P G ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKASYKFKVP-GTIVDQSSNGQT 219
Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEET-AILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
++E + N ++ + I E+ IL+ LT E+++ I +D V D+ FA
Sbjct: 220 VYIELDLVAKLNE-KLAFQKAVIESESYQILAELTGELSEQRTSILNAIDAVTMFDIIFA 278
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
RA +++ DG+ P ++ INI +HP L+G+
Sbjct: 279 RAKYSREYDGITPQINQAER------INIIQGRHPFLVGT-------------------- 312
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
PVP+D ++ + R ++ITG N GGKT MKT+GL +LM+ AGL
Sbjct: 313 ----------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMAGLQ 356
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA+ L FD + DIGD Q++E LSTFS H+ I I++ R +LVL+DE+GSG
Sbjct: 357 VPAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSG 416
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG LA +IL+ L + L V TTHY ++ K F AA +F ETL P Y
Sbjct: 417 TDPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYV 476
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ G GDS AL IA+ + + +IQRA K +
Sbjct: 477 LQVGEVGDSQALWIAQKMRLPKALIQRAGKYI 508
>gi|42783724|ref|NP_980971.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus ATCC 10987]
gi|81699646|sp|Q72ZJ0.1|MUTS2_BACC1 RecName: Full=MutS2 protein
gi|42739654|gb|AAS43579.1| MutS2 family protein [Bacillus cereus ATCC 10987]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 264/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVDL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I++A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQAR 509
>gi|289578704|ref|YP_003477331.1| MutS2 family protein [Thermoanaerobacter italicus Ab9]
gi|289528417|gb|ADD02769.1| MutS2 family protein [Thermoanaerobacter italicus Ab9]
Length = 791
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 224/412 (54%), Gaps = 51/412 (12%)
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ +P+IT R+ R V +K ++ GI + SSSGAT F+EP V+ NN ++
Sbjct: 185 LQEPIITVRQGRYVVPVKQEYRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELK 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E IL L+ E+ K + + ++ V E+D FA+A ++ + V P L++ +
Sbjct: 244 ERQEIQRILFELSQEVKKYAQALFNDIEIVSELDFTFAKAKYSLKLKAVRPELNTMGY-- 301
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
IN++ +HPL+ N E V PIDI
Sbjct: 302 ----INLKKARHPLI-----------------------NQEAVV------------PIDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ + +VITGPNTGGKT ++KT+GL ++M+ AGL +PA+ ++ F+ I DIGD
Sbjct: 323 YIGDQFNTLVITGPNTGGKTVTLKTVGLLTIMAMAGLNIPAEEGSQVSIFEEIFVDIGDE 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ I+ +L+ V++ L L+DE+G+GTDP EG ALA SIL L
Sbjct: 383 QSIEQSLSTFSSHMTNIISMLQKVNKNCLALLDELGAGTDPVEGAALAMSILDTLHKIGA 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L K ENA+ EF +ETL+PTY+++ G G SNA IAK +G R
Sbjct: 443 KTIATTHYSELKQYALKTAGVENASVEFDVETLKPTYKLIIGLPGKSNAFEIAKRLGLPR 502
Query: 526 KIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+II+ A+K + E L+ E ++ + +RR+LE A L +
Sbjct: 503 QIIEDARKYISGEALKFE-------DIIADVESKRRELEKANHEMAFLRKNV 547
>gi|358066120|ref|ZP_09152654.1| MutS2 protein [Clostridium hathewayi WAL-18680]
gi|356695983|gb|EHI57608.1| MutS2 protein [Clostridium hathewayi WAL-18680]
Length = 792
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 264/514 (51%), Gaps = 58/514 (11%)
Query: 27 TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TLRAVNNVWKKLTE 84
T AA + Q + ++DI L G LS +E+ ++ T+ A + + + E
Sbjct: 51 TDAATRVRQKGGISFGGLKDIRDSLKRLEVGSSLSITELLSISSLLTISARSKAYGR-HE 109
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+EL DSL+ +L ++ LT + +I CI + + D AS L +R R
Sbjct: 110 ESELPNDSLE------DLFRSLEPLTPVNTEIKRCIISEEEVS-DDASPGLRHVR----R 158
Query: 145 NMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+M+ ++ + I + + P+IT R R C+ +K+ +K + G+ + SS+G
Sbjct: 159 SMKVINDRVHTQLNAILNSSRTYLQDPVITMRDGRYCLPVKSEYKNQVA-GMVHDQSSTG 217
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP ++ NN L E E A+L+ L+ ++ E+ + ++D F
Sbjct: 218 STLFIEPMAIIKLNNELRELEIQEQKEIEAVLADLSNQLLPYMEELASNQSVLAQLDFIF 277
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
ARA ++ P ++ + INI+ +HPLL +P K
Sbjct: 278 ARAALSRHYKCSEPSFNTNGY------INIKDGRHPLL---------------DPQKV-- 314
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VPI+I + E ++++TGPNTGGKT S+KT+GL +LM +AGL
Sbjct: 315 ------------------VPINIHLGKEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGL 356
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV ILE SL L DE+G+
Sbjct: 357 HIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQADSHSLCLFDELGA 416
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA ++L +L + + TTHY++L ENA EFS+ETL+PTY
Sbjct: 417 GTDPTEGAALAIAVLTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETLQPTY 476
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
R+L G G SNA I++ +G II A+ +E
Sbjct: 477 RLLIGIPGKSNAFAISRKLGLPEFIIDDARTHLE 510
>gi|423417539|ref|ZP_17394628.1| MutS2 protein [Bacillus cereus BAG3X2-1]
gi|401107818|gb|EJQ15763.1| MutS2 protein [Bacillus cereus BAG3X2-1]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|222524571|ref|YP_002569042.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
gi|222448450|gb|ACM52716.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
Length = 819
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 266/536 (49%), Gaps = 71/536 (13%)
Query: 27 TSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
T+ A +++ P + + D+ + A G +L + + + TL++ + ++L+
Sbjct: 52 TAEARLLLEEWPEVSIGGARDVRRAVQHAARGGILDGTTLREIAATLQSAALLRQRLSR- 110
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK 143
LD +R+ L++L + L E I I D + +LD AS L +R E +
Sbjct: 111 --LD----ERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHEVR 161
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
L L+ + AG + +P+IT R R + +KASH+ + G+ + S SGA
Sbjct: 162 VAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGSGA 220
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T ++EP VE NN L ++E E ILS L+ ++ + I ++ + +DLAFA
Sbjct: 221 TLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLAFA 280
Query: 264 RAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A +A P + S + + + +HPLL ++
Sbjct: 281 LARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV--------------- 325
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
VPID+ + E +++ITGPNTGGKT ++KT GL +LM++A
Sbjct: 326 --------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMAQA 365
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------- 431
G+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 366 GMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSESD 425
Query: 432 ----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
+LVL DE+G+GTDP EG ALA +I+ L + L + TTHYA+L
Sbjct: 426 AYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAFAY 485
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+NA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A+ ++R
Sbjct: 486 TTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFIDR 541
>gi|229019772|ref|ZP_04176575.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
gi|229025999|ref|ZP_04182383.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228735280|gb|EEL85891.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228741497|gb|EEL91694.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 284/574 (49%), Gaps = 65/574 (11%)
Query: 13 FGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
FG+ +E Q ++ + + + S PL I DI + A G +LSP+E+ + T+
Sbjct: 40 FGEIVE-LQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTM 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRA 131
N+ K+ E +G L P+LE + L +LE+KI CI ++ D A
Sbjct: 97 YGSRNM-KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSA 150
Query: 132 SEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L IR + R E L+++ + AQ + I +T R R + +K ++
Sbjct: 151 SDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ GI + S+SG T F+EP+ VE NN E E IL +LT E+A
Sbjct: 207 GVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADI 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 266 VLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P + VP +I + + +VITGPNTGGKT +
Sbjct: 313 --------DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 345 LKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILE 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L +
Sbjct: 405 KADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF + TL PTY++L G G SNA I+K +G ++I +A+ + ++
Sbjct: 465 NASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKI 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ L E ++ E A +L + L+RE
Sbjct: 520 ENMIAKLEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|431038291|ref|ZP_19492485.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1590]
gi|430562325|gb|ELB01567.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1590]
Length = 642
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|423090112|ref|ZP_17078447.1| MutS2 family protein [Clostridium difficile 70-100-2010]
gi|357557023|gb|EHJ38589.1| MutS2 family protein [Clostridium difficile 70-100-2010]
Length = 792
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 270/519 (52%), Gaps = 50/519 (9%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTY++L G G SNA I++ +G +I RA++ +
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYI 512
>gi|228954821|ref|ZP_04116841.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229112016|ref|ZP_04241559.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|423426676|ref|ZP_17403707.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|423437985|ref|ZP_17414966.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|423502774|ref|ZP_17479366.1| MutS2 protein [Bacillus cereus HD73]
gi|449091504|ref|YP_007423945.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228671339|gb|EEL26640.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|228804810|gb|EEM51409.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401110242|gb|EJQ18151.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|401119598|gb|EJQ27409.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|402460013|gb|EJV91741.1| MutS2 protein [Bacillus cereus HD73]
gi|449025261|gb|AGE80424.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 786
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 282/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|423598156|ref|ZP_17574156.1| MutS2 protein [Bacillus cereus VD078]
gi|401237617|gb|EJR44068.1| MutS2 protein [Bacillus cereus VD078]
Length = 786
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A I ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIILSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSNRVIDRAR 509
>gi|429762236|ref|ZP_19294636.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
gi|429182050|gb|EKY23175.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
Length = 800
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 240/473 (50%), Gaps = 50/473 (10%)
Query: 60 LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L E+ + R L +V N V + +L+ DSL EL ++ L +L +I
Sbjct: 84 LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CI + I D AS L+ IR K+ + + + L + + + ++T R R
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
C+ +K ++ G+ + S+SG T F+EP V NN L E +E ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+ + ++ + ++ +D FA+A +A+ +D PI D INI+ HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VPI++ + + ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A
Sbjct: 455 FALSTDDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGA 507
>gi|217967690|ref|YP_002353196.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
gi|217336789|gb|ACK42582.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
Length = 778
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 279/560 (49%), Gaps = 66/560 (11%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LLN+ + P S I +I ++ A G ++ P E + +TL VW KL
Sbjct: 47 LLNEEAFKTIYSFGYP-SFSGIRNIEIYIDKAEKGGIVYPDEFEEIVKTL----EVWGKL 101
Query: 83 TEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+ E +++ +P L KN + L +L +I C+ +I D AS +L+ IR +
Sbjct: 102 RDYQE----KVRKTAP--NLWKNTLHNLHDLYIQIRKCVQDGAVI--DSASPELKQIRQK 153
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
++R + + L+ + + ++ G + +IT R R V ++ + + GI + S+S
Sbjct: 154 KERLNQKVRETLENIIQKEWR-GYLQDQIITIRHGRYVVPVRQEFRGKI-QGIVHDQSTS 211
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G T ++EP+ VE NN L + E E IL+ LT+ + + EI + E+D
Sbjct: 212 GLTVYVEPQVIVELNNQIALLESEEKREIERILTRLTSVLLSYKEEILENLRTSFELDFV 271
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
+A+ +A+ + PIL + + + +HP L
Sbjct: 272 YAKVKWAEKYKAITPILEKDKPI-----VILREARHPFL--------------------- 305
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
D VPI ++V +VITGPNTGGKT ++KT+GL L+++AG
Sbjct: 306 ---------------GDKAVPITLEVGRYFHTLVITGPNTGGKTVTLKTIGLFVLLNQAG 350
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----ESLVLI 437
+ +PAK L F+ + ADIGD QS+EQNLSTFS H++ I+ ++ + R + LVLI
Sbjct: 351 IPVPAKEGTTLGIFNQVFADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKKVLVLI 410
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP EG ALA ++L+Y ++ + V+ THY L + K ENA+ EF +
Sbjct: 411 DELGAGTDPQEGAALAVALLEYFHEKGTINVIATHYPQLKVIASKYPGMENASMEFDEIS 470
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
LRP Y++ G G SNA+ I+K +G RKI+ RA L+ + + E+ L ++
Sbjct: 471 LRPLYKVAMGIPGKSNAILISKRLGLPRKILDRAVSLL-----SENEIKLEEVIGELQKD 525
Query: 558 RRKLESQARTAASLHAEIMD 577
RRK + + + E+ +
Sbjct: 526 RRKYQEEIDKINKVKKELQE 545
>gi|254724521|ref|ZP_05186304.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A1055]
Length = 786
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSNRVIDQAR 509
>gi|303271595|ref|XP_003055159.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463133|gb|EEH60411.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 839
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 281/592 (47%), Gaps = 73/592 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIE---DIAGILNSAVSGQLLSPSEICA 67
+P G S S + L++T+A +A + L S E D+ + A SG+ LS + +
Sbjct: 60 LPLGASPAISARWLSETTACVAACDAGALPTSAFEGTKDVRAFIRGAASGKTLSGASLAD 119
Query: 68 VRRTLRAVNNVW---KKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCK 123
+ T+ A VW + L + ++PL+ L + ++E +I C+
Sbjct: 120 IASTMTAAARVWASVESLVATTSDADAAAAAFAPLVSLASPLASTPRDVETEIRRCVAVP 179
Query: 124 LLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
+LD AS+ L IR R+ L LL++ A + + ++ I R +R C+ IK
Sbjct: 180 GGNVLDDASDALRAIRDARRDAERELRELLRETADYMARKNFAERAQIVTRLNRECIPIK 239
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI-- 241
A + + +G+ L S SG T F EP GAV NN L+ E AE +L LTA +
Sbjct: 240 AGAQSEM-EGVILGASGSGQTVFKEPAGAVPLNNAIAELNAKEDAEIERVLRTLTALVLG 298
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI----------LSSQSHVSFDSSIN 291
A + ++ + +D A+A A W+D P+ +
Sbjct: 299 ADDGEGLTEAVEALGAVDATRAKAKHAAWLD-ASPVKVVGGTDGDGDDDDDGGGGGGCVR 357
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL------------------- 332
+ G +HPLLL +L L P + SE T G
Sbjct: 358 LPGARHPLLLQRTLPKL--------PRGGTIGASESTEGWDGEGEGDDDDDEGEGEDDDG 409
Query: 333 ------SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP- 385
S + VPID V T +V ITGPNTGGKTAS+K LGL LM++AGL+LP
Sbjct: 410 EEDEKPSTSSASSVVPIDFVVPPRTSLVAITGPNTGGKTASLKLLGLCLLMARAGLHLPV 469
Query: 386 ----AKNHPRLPWFDLILADIGDHQS--LEQNLSTFSGHISRIVDILEL------VSRES 433
A R+PW +LAD+GD QS LE LSTFS H+ R+ IL R +
Sbjct: 470 ARGAAGADARVPWTKTVLADLGDAQSLDLEGGLSTFSAHLRRLQRILRASRDDTDAKRYT 529
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE------ 487
+VL+DE G GTDP+EG ALA+++L+ D L V T+HY ++ L D
Sbjct: 530 VVLLDEPGGGTDPAEGAALASAVLRASADACRLVVATSHYDEVKALAGGDGGDGGMVGAA 589
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NAA EF TLRPTYR+LWG++G+SNAL IA+ +G D + RA+K R R
Sbjct: 590 NAAVEFDAATLRPTYRLLWGASGESNALAIARGLGLDAGVADRAEKRWRRQR 641
>gi|229197610|ref|ZP_04324333.1| DNA mismatch repair protein [Bacillus cereus m1293]
gi|423604873|ref|ZP_17580766.1| MutS2 family protein [Bacillus cereus VD102]
gi|228585874|gb|EEK43969.1| DNA mismatch repair protein [Bacillus cereus m1293]
gi|401244021|gb|EJR50385.1| MutS2 family protein [Bacillus cereus VD102]
Length = 633
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
NM+++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA++ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYMENKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|75762595|ref|ZP_00742445.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899706|ref|YP_002448117.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus G9842]
gi|228903069|ref|ZP_04067206.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|423358361|ref|ZP_17335864.1| MutS2 protein [Bacillus cereus VD022]
gi|423560939|ref|ZP_17537215.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|434377706|ref|YP_006612350.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
gi|226723045|sp|B7IJV1.1|MUTS2_BACC2 RecName: Full=MutS2 protein
gi|74489915|gb|EAO53281.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218542145|gb|ACK94539.1| MutS2 family protein [Bacillus cereus G9842]
gi|228856555|gb|EEN01078.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|401086048|gb|EJP94280.1| MutS2 protein [Bacillus cereus VD022]
gi|401202784|gb|EJR09634.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|401876263|gb|AFQ28430.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
Length = 786
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|365853718|ref|ZP_09393983.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
gi|363711876|gb|EHL95582.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
Length = 788
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 269/536 (50%), Gaps = 50/536 (9%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNS-AVSGQLL 60
GH +VQ Q P G Q+L A + + + + + +I+ + + L
Sbjct: 27 GHEIVQNLQ-PSGDYAVVDQQLKETADGADIVRLAGEIPIPKLTEISPYMKRLKIENAAL 85
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
S +E+ + + LRAV V + + + + R P + + + ++ ++ I
Sbjct: 86 SGTELAHITKLLRAVKTVSQFFEDFK--NEEVTLRTVP--KTVAKLTLMPDITTRMVQSI 141
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
D + LD AS L IR ++ N+ + + K + ++ + +P+IT R R +
Sbjct: 142 DDDGRV-LDSASSQLRAIRRTIEQTQSNIRTRMGKYL-KGSESKYLSEPIITVRDERFVL 199
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
I+A +K GI + S+SG T ++EP VE NN R +E E+ IL+ LT
Sbjct: 200 PIRAEYKSHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERTEQRRILAELTEM 258
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
I +E+ M+ V ++D A+A +A V P +S+++ +N+ +HPL+
Sbjct: 259 IRPYRQELLENMNLVGQLDFVNAKAKYAHQSGAVLPKISTEN------VVNLRHARHPLI 312
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ VP DIK+ + + +++TGPN
Sbjct: 313 AKEKV-----------------------------------VPNDIKIGADYQTIIVTGPN 337
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+
Sbjct: 338 TGGKTITIKTVGLLQLMGQSGLFITADEESQIGVFDDVFADIGDDQSIEANLSTFSSHMD 397
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
I+ I++ ++ +SLVL+DE+G+GTDP EG ALA +I+ + + TTHY +L
Sbjct: 398 NIIAIMKQLTDKSLVLLDELGAGTDPKEGAALAMAIIDAIHRSGCEMIATTHYPELKAFA 457
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ EF +ETLRPTYR+L G G SNALNIA +G +I+Q+A+ +
Sbjct: 458 YNRPGIINASMEFDVETLRPTYRLLLGIPGQSNALNIASRLGMPEQIVQQAKSFTD 513
>gi|196042562|ref|ZP_03109801.1| putative MutS family protein [Bacillus cereus 03BB108]
gi|229185709|ref|ZP_04312887.1| DNA mismatch repair protein [Bacillus cereus BGSC 6E1]
gi|196026046|gb|EDX64714.1| putative MutS family protein [Bacillus cereus 03BB108]
gi|228597796|gb|EEK55438.1| DNA mismatch repair protein [Bacillus cereus BGSC 6E1]
Length = 633
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLAAYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L++ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNNHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++QRA+ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRAKAYMENKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|228910376|ref|ZP_04074191.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
gi|228849142|gb|EEM93981.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
Length = 786
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|423389147|ref|ZP_17366373.1| MutS2 protein [Bacillus cereus BAG1X1-3]
gi|401642422|gb|EJS60133.1| MutS2 protein [Bacillus cereus BAG1X1-3]
Length = 786
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|423574919|ref|ZP_17551038.1| MutS2 family protein [Bacillus cereus MSX-D12]
gi|401211189|gb|EJR17938.1| MutS2 family protein [Bacillus cereus MSX-D12]
Length = 633
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
NM+++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA++ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYMENKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|357054690|ref|ZP_09115771.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
gi|355383994|gb|EHG31065.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
Length = 812
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 269/551 (48%), Gaps = 68/551 (12%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
+ + A P GK+L EE + QT+ A+ ++ + + S I DI L
Sbjct: 18 LTEYAASPLGKALCQSLSPSSDLEEVRTWQAQTTDAVTRIRLKGSVSFSGIRDIGDSLKR 77
Query: 54 AVSGQLLSPSEICAVRRTL----RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
G LS E+ ++ L RA E G+S + L L L
Sbjct: 78 LDIGSSLSIPELLSISSLLTVAARAKAYGRHDADEDGRETGESQDDFDSLEPLFAGLEPL 137
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
T L +I CI + + D AS L +R K R L+S+L + + A
Sbjct: 138 TPLNSEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNSILNSNRSYLQDA-- 194
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+IT R R C+ +K+ +K + G+ + S++G+T F+EP + NN L
Sbjct: 195 ----VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMAIIRLNNEMRELEIQ 249
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E A+L+ L+ + A E++ M+ + ++D FA+AG A+ P+ + +
Sbjct: 250 EQKEIEAVLASLSNQAAPYTEELRMDMELLAQLDFIFAKAGLARHYKCSAPMFNDKG--- 306
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
I+I+ +HPLL NP F VPI++
Sbjct: 307 ---CIHIKDGRHPLL---------------NP--------------------QFVVPINV 328
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ E ++++TGPNTGGKT S+KT+GL +LM ++GL++PA L FD + ADIGD
Sbjct: 329 WLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAVFDQVFADIGDE 388
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA +IL +L +
Sbjct: 389 QSIEQSLSTFSAHMTNIVRILSEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKC 448
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L ENA EF++ETL+PTYR+L G G SNA I++ +G
Sbjct: 449 RTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQKLGLPG 508
Query: 526 KIIQRAQKLVE 536
II A+ +E
Sbjct: 509 YIIDDAKSHLE 519
>gi|423395169|ref|ZP_17372370.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|423406028|ref|ZP_17383177.1| MutS2 protein [Bacillus cereus BAG2X1-3]
gi|401655940|gb|EJS73468.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|401660697|gb|EJS78175.1| MutS2 protein [Bacillus cereus BAG2X1-3]
Length = 786
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILERHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKHIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|326803291|ref|YP_004321109.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651631|gb|AEA01814.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
urinae ACS-120-V-Col10a]
Length = 795
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 260/502 (51%), Gaps = 57/502 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L L + D+ ++ G +L+ E+ V R L++V+ V E +LD D Q
Sbjct: 63 LPLGQLVDVGPLMKRLDIGGILNGQELAHVGRVLKSVSEVSHFFKEIEDLDIDVEQMQGY 122
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 154
+ + + + ++ + I D + D AS L IR AE +LD+++K
Sbjct: 123 VSDFANHKDLAKKINQAI--ASDGS---VYDEASSHLHSIRQSIKAEEAHIRMSLDNIIK 177
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
QA + ++T R R + +K ++ G+ + S+SG T ++EP+ +E
Sbjct: 178 SS-----QADYLSDQIVTIRNDRYVLPVKQEYRRKFG-GVVHDQSASGQTLYIEPQVVME 231
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
NN L E AE I + L+A++A +EI + ++D A+ +A+
Sbjct: 232 SNNKVHSLRIEEQAEIERIFAELSADLAPHSQEINQNNQILGQLDFIQAKWRYAKKQGAH 291
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P+++ Q H S+N+E HPLL NP K+ V N+
Sbjct: 292 RPLIA-QDH----QSLNLEEAVHPLL---------------NP-KTAVANT--------- 321
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
I + + R+++ITGPNTGGKT ++KT GL LM ++GLY+ AK R+
Sbjct: 322 ----------ISFDGDYRMLIITGPNTGGKTITLKTTGLLQLMGQSGLYITAKADSRIGV 371
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD I ADIGD QS+E NLSTFSGH++ I+ ILE + +SLVLIDE+GSGTDP EG ALA
Sbjct: 372 FDHIFADIGDEQSIEANLSTFSGHMTNIISILEAIDDQSLVLIDELGSGTDPKEGAALAM 431
Query: 455 SILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL L +VG V+ TTHY +L ++ NA+ EF +TL PTYR+L G G SN
Sbjct: 432 AILNRLA-QVGCTVLATTHYPELKAYAFEEPNAINASVEFDEKTLTPTYRLLIGQPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQKLV 535
A +I++ +G D+ I+ A+ V
Sbjct: 491 AFDISQRLGLDQSIVDEARYYV 512
>gi|217960893|ref|YP_002339459.1| putative MutS family protein [Bacillus cereus AH187]
gi|222096952|ref|YP_002531009.1| DNA mismatch repair protein [Bacillus cereus Q1]
gi|229140103|ref|ZP_04268663.1| DNA mismatch repair protein [Bacillus cereus BDRD-ST26]
gi|375285398|ref|YP_005105837.1| MutS family protein [Bacillus cereus NC7401]
gi|423353182|ref|ZP_17330809.1| MutS2 family protein [Bacillus cereus IS075]
gi|423567625|ref|ZP_17543872.1| MutS2 family protein [Bacillus cereus MSX-A12]
gi|217066811|gb|ACJ81061.1| putative MutS family protein [Bacillus cereus AH187]
gi|221241010|gb|ACM13720.1| DNA mismatch repair protein [Bacillus cereus Q1]
gi|228643358|gb|EEK99629.1| DNA mismatch repair protein [Bacillus cereus BDRD-ST26]
gi|358353925|dbj|BAL19097.1| MutS family protein, putative [Bacillus cereus NC7401]
gi|401089822|gb|EJP97986.1| MutS2 family protein [Bacillus cereus IS075]
gi|401213684|gb|EJR20423.1| MutS2 family protein [Bacillus cereus MSX-A12]
Length = 633
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
NM+++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA++ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKEYMENKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|395242283|ref|ZP_10419281.1| MutS domain V [Lactobacillus pasteurii CRBIP 24.76]
gi|394480379|emb|CCI85521.1| MutS domain V [Lactobacillus pasteurii CRBIP 24.76]
Length = 627
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 268/523 (51%), Gaps = 64/523 (12%)
Query: 21 QKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++LL +T A+A++++ Q + E I IL A G LLS E+ V LR V +
Sbjct: 40 EQLLIETQQAIAVIETGQHMPFVDSEAIDPILLKAQKGLLLSADELEKVADYLR-VMTLL 98
Query: 80 KKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
K+ + E + L Y L+EL K LEE I I+ I+ DRA DL +
Sbjct: 99 KRFFKRLESEAPLLSSYVQSLIELPK-------LEEAIYDSIEHG--IVADRADRDLARL 149
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + ++ + L I PLI ++ + + +KA++K L +G +
Sbjct: 150 RKQLTQDQTAIREGLNHFLTNKKYKTMIQDPLIVEKNGVLTIPMKANYKNQL-NGQIVAS 208
Query: 199 SSSGATYFMEPKGAVEFN----NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
SS G T + +P V N ++++++N E A IL LTA++ ++ R+I +
Sbjct: 209 SSGGKTVYWQPSKMVNLNAEIATLKMQITNIEYA----ILGALTAQVFENSRDINENIAA 264
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ ID ARA ++Q DG P+L+ ++ S+ + ++HPLL+
Sbjct: 265 ITAIDEIMARARYSQSYDGKKPVLNHEN------SLELNAVRHPLLVN------------ 306
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
PVP+ +K++ E V++ITGPN GGKT ++KT+GL
Sbjct: 307 -------------------------PVPLTVKLDQERAVLMITGPNAGGKTVALKTIGLM 341
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
LM++ GL+LP++ ++P D + IGDHQS++ +LSTFS + +I DI+ + SL
Sbjct: 342 VLMTELGLFLPSQKPCKIPVMDQVCTLIGDHQSIDNSLSTFSAEMKQIADIISGATARSL 401
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP+EG A+A +LQ L R L V TTHY+ + K F A +F
Sbjct: 402 ILLDELGTGTDPNEGSAIAIGVLQELYLRGCLIVATTHYSAIKDFALKHEAFMTAEMDFD 461
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
TL PTYR++ GDS AL IAK +G +++ A+ +ER
Sbjct: 462 PATLSPTYRLILNRVGDSRALWIAKKVGLSDRVLHLAENYLER 504
>gi|118479701|ref|YP_896852.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis str. Al Hakam]
gi|196044939|ref|ZP_03112173.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225866525|ref|YP_002751903.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|229186805|ref|ZP_04313960.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|229198701|ref|ZP_04325400.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|376268476|ref|YP_005121188.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|423573771|ref|ZP_17549890.1| MutS2 protein [Bacillus cereus MSX-D12]
gi|189030425|sp|A0RJF2.1|MUTS2_BACAH RecName: Full=MutS2 protein
gi|254766189|sp|C1ETZ0.1|MUTS2_BACC3 RecName: Full=MutS2 protein
gi|118418926|gb|ABK87345.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
str. Al Hakam]
gi|196024427|gb|EDX63100.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225787320|gb|ACO27537.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|228584777|gb|EEK42896.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|228596542|gb|EEK54207.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|364514276|gb|AEW57675.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|401213523|gb|EJR20263.1| MutS2 protein [Bacillus cereus MSX-D12]
Length = 786
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|402300947|ref|ZP_10820382.1| recombination and DNA strand exchange inhibitor protein [Bacillus
alcalophilus ATCC 27647]
gi|401723934|gb|EJS97346.1| recombination and DNA strand exchange inhibitor protein [Bacillus
alcalophilus ATCC 27647]
Length = 785
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/538 (30%), Positives = 270/538 (50%), Gaps = 51/538 (9%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI + A G LLS SE+ + T+ + K +T E + L + +
Sbjct: 67 IYDITPHVKRASIGGLLSASELMEIASTIYGGRQLKKFITNLVEE---EERELPLLYQHV 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ N LT++E +I CID + LD AS+ L IR + + ++ S L+++
Sbjct: 124 EQINPLTDVEREIKQCIDDNGHV-LDSASQTLRTIRQQVRSYESSVRSKLEQMTRSSSTQ 182
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +IT R R + +K ++ GI + S+SG T F+EP+ V NN
Sbjct: 183 KMLSDAIITIRNDRFVIPVKQEYRGSF-GGIVHDQSASGQTLFIEPQVVVTLNNQLREAK 241
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
E E IL+ L+ ++A+ E+ + + +DL A+A +A + P ++ H
Sbjct: 242 VKETREIDRILAELSRQVAEVTDELLTNISTLAVLDLIIAKAHYANAIKATSPEINEAGH 301
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
V + +HPL+ + VPI
Sbjct: 302 VLLKKA------RHPLIDAGEV-----------------------------------VPI 320
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E R ++ITGPNTGGKT ++KT+GL +LM ++GL++P + ++ + + ADIG
Sbjct: 321 DIELGGEFRSLIITGPNTGGKTVTLKTVGLLTLMMQSGLHVPVEEESKMAVYKQVFADIG 380
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQ+LSTFS H++ IV IL+ V +SLVL DE+G+GTDP+EG ALA +IL + R
Sbjct: 381 DEQSIEQSLSTFSSHMTNIVQILDKVDFQSLVLFDELGAGTDPTEGAALAIAILDDVYKR 440
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
V TTHY++L NA+ EF +++L+PTYR+L G G SNA I++ +G
Sbjct: 441 GAAVVATTHYSELKGYAYNREGVMNASVEFDVQSLKPTYRLLIGVPGRSNAFAISRRLGL 500
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
II RA+ + + ++ + SL E ++ +++ A ++ E L+R+
Sbjct: 501 GEAIIDRAKDQI-----DSDSNKVENMIVSLEESKKSADAEQIEAKNIRFEAEKLHRD 553
>gi|229163542|ref|ZP_04291492.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
gi|228619924|gb|EEK76800.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
Length = 786
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|325568915|ref|ZP_08145208.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
gi|325157953|gb|EGC70109.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
Length = 787
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 241/468 (51%), Gaps = 71/468 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILTELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IVD+L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVDVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLY 579
+ + +E+ L E RRK+ + AA LH E+ Y
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAY 557
>gi|163942283|ref|YP_001647167.1| recombination and DNA strand exchange inhibitor protein [Bacillus
weihenstephanensis KBAB4]
gi|229486366|sp|A9VJL2.1|MUTS2_BACWK RecName: Full=MutS2 protein
gi|163864480|gb|ABY45539.1| MutS2 family protein [Bacillus weihenstephanensis KBAB4]
Length = 786
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRANIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|196034369|ref|ZP_03101778.1| MutS2 family protein [Bacillus cereus W]
gi|218905777|ref|YP_002453611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH820]
gi|228929599|ref|ZP_04092617.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|226723044|sp|B7JR57.1|MUTS2_BACC0 RecName: Full=MutS2 protein
gi|195992911|gb|EDX56870.1| MutS2 family protein [Bacillus cereus W]
gi|218535887|gb|ACK88285.1| MutS2 family protein [Bacillus cereus AH820]
gi|228829986|gb|EEM75605.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|325663164|ref|ZP_08151614.1| hypothetical protein HMPREF0490_02355 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470618|gb|EGC73848.1| hypothetical protein HMPREF0490_02355 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 646
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 212/406 (52%), Gaps = 47/406 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E E
Sbjct: 189 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 247
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+A+ A EI+ + E+D FA+ FA ++ PI + +
Sbjct: 248 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGY------ 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+I +HPLL + VPI + +
Sbjct: 302 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 327 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALATSIL YL +R +
Sbjct: 387 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 447 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 506
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
A+ ERL Q +L L RR +E + + A+ E+
Sbjct: 507 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREV 547
>gi|228917190|ref|ZP_04080747.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228935862|ref|ZP_04098672.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823630|gb|EEM69452.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228842391|gb|EEM87482.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|164687641|ref|ZP_02211669.1| hypothetical protein CLOBAR_01283 [Clostridium bartlettii DSM
16795]
gi|164603415|gb|EDQ96880.1| MutS2 family protein [Clostridium bartlettii DSM 16795]
Length = 792
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 285/567 (50%), Gaps = 55/567 (9%)
Query: 17 LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E + L +TS A A++ + L + I DI A G L P + + LR
Sbjct: 40 FDEVKNTLLETSEAQAILIKRGLVSMDGIHDIEDKAKRAHVGATLDPGALLKIADCLRVA 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASED 134
++ + L + E D + P+++ L N + ++E++I I + I D AS
Sbjct: 100 RSLKRNLEGSEEEDFNY-----PIIQALTNALYTFRDIEDRIYTSIVGESEI-SDNASTT 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L+ IR + +++ S L + + + +I+ R R + +KA ++ ++ GI
Sbjct: 154 LKTIRRRIVQKNQSIRSKLNSIISSTTYQKYLQDNIISMRGDRFVIPVKAEYRSVVS-GI 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP VE NN +L E E ILS L+A I + E+ +
Sbjct: 213 VHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILSELSAMIGEISGELISNQEI 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ ++D AFA+ + M + P+L+ + + +I+ +HP++
Sbjct: 273 LGKLDFAFAKGKLSVEMRAIEPVLNEEKY------FHIKNGRHPMID------------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
K DV VP + + + +VITGPNTGGKT ++KT+GL
Sbjct: 314 ----KRDV------------------VPNTVYLGKDFDTLVITGPNTGGKTVTIKTVGLF 351
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ V IL V+ +SL
Sbjct: 352 ALMTQSGLHIPADFGTSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNTVSILNEVTSDSL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
V+ DE+G+GTDP EG ALA +IL+ + + TTHY++L ENAA EF
Sbjct: 412 VIFDELGAGTDPVEGAALAIAILEDVNMAGAKCIATTHYSELKNYALTKNGVENAAVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
++TL PTYR+L G G SNA I+K +G +I RA++ + E + ++ Q++
Sbjct: 472 VDTLSPTYRLLIGVPGKSNAFEISKKLGLSEYVINRAKEFINTDNIELE-----DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYRE 581
+ R K E A L EI D+ E
Sbjct: 527 EKNRLKAEEDRLEAEKLKKEIEDIKAE 553
>gi|15612939|ref|NP_241242.1| DNA mismatch repair protein [Bacillus halodurans C-125]
gi|10172989|dbj|BAB04095.1| DNA mismatch repair protein [Bacillus halodurans C-125]
Length = 571
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 210/399 (52%), Gaps = 61/399 (15%)
Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
A + + ++ ++ R + IK ++ + G ++ SSSGAT FMEPK L
Sbjct: 178 ASYLQENIVVEKNGRFTIPIKKQYRSKV-SGTVIDTSSSGATVFMEPKEVGALYEQLDDL 236
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
+E E IL LTA + E+E+ MD + D+ FA+A + + +DGV P L+
Sbjct: 237 LAAESYEVETILYTLTASVLAIEKELHLAMDIMHHYDVLFAKAKYGRSIDGVIPALND-- 294
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
D +I+++ +HPLL + VP
Sbjct: 295 ----DYTIHLDDARHPLL------------------------------------GEQAVP 314
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+ +K+ R ++ITGPNTGGKT ++KT+GL +LM++ GL +PA L F + DI
Sbjct: 315 LSLKLGIRERALIITGPNTGGKTVTLKTVGLLTLMAQTGLMIPAGPKTSLHVFQKLFVDI 374
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQNLSTFS ++ I+ ILE ++LVL+DE+GSGTDP+EG+ALA +L+ L
Sbjct: 375 GDGQSIEQNLSTFSSRLTNIIHILERADDQTLVLVDELGSGTDPNEGMALAQVLLEQLFA 434
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ + TTHY +L L F N + EF + TL+PTYR+L G TG+S A +IA ++G
Sbjct: 435 KGATILATTHYRELKSLSKTHEGFLNGSMEFDVATLQPTYRLLLGETGNSQAFDIAFTLG 494
Query: 523 FDRKIIQRAQKL------------------VERLRPERQ 543
++I RAQ+L +RLR ERQ
Sbjct: 495 LHPELIHRAQQLTGDQLGESRYTTTKDLDSTQRLRYERQ 533
>gi|229062235|ref|ZP_04199557.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
gi|228717063|gb|EEL68742.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|423368579|ref|ZP_17346011.1| MutS2 protein [Bacillus cereus VD142]
gi|401080105|gb|EJP88395.1| MutS2 protein [Bacillus cereus VD142]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|423082167|ref|ZP_17070762.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
gi|423085790|ref|ZP_17074229.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357548912|gb|EHJ30766.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357549417|gb|EHJ31264.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
Length = 792
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 269/519 (51%), Gaps = 50/519 (9%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +KA ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++P + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPVDYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTY++L G G SNA I++ +G +I RA++ +
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYI 512
>gi|52140954|ref|YP_085875.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus E33L]
gi|196042123|ref|ZP_03109407.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228948276|ref|ZP_04110559.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124117|ref|ZP_04253309.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|81685978|sp|Q633P2.1|MUTS2_BACCZ RecName: Full=MutS2 protein
gi|51974423|gb|AAU15973.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
gi|196027059|gb|EDX65682.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228659419|gb|EEL15067.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|228811263|gb|EEM57601.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|423512651|ref|ZP_17489182.1| MutS2 protein [Bacillus cereus HuA2-1]
gi|402447575|gb|EJV79425.1| MutS2 protein [Bacillus cereus HuA2-1]
Length = 786
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|340755208|ref|ZP_08691905.1| MutS2 protein [Fusobacterium sp. D12]
gi|419840320|ref|ZP_14363712.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421499445|ref|ZP_15946489.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313685859|gb|EFS22694.1| MutS2 protein [Fusobacterium sp. D12]
gi|386908352|gb|EIJ73049.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402269698|gb|EJU19022.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 778
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 252/498 (50%), Gaps = 52/498 (10%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICSLTEKIKLIGTYLEVDELWDINMNLRFFRIFQAQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + ++ + L +E+ I +D + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMRQVSPLRLIEDLISKAVDSEKQI-KDEASLDLRDIRIHKKMLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ A + ++T+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEASIAVAFQERIVTERDGRMVVPVKVDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + E+ + +L +D A+A F ++ C +
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFG--LEEACHV 290
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+ Q + +E +HP + +
Sbjct: 291 PTIQGK----EILYLEKARHPFIPKEKV-------------------------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + R+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA H ++ +F
Sbjct: 315 ---VPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEHSKIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + +IL V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ A++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLV 535
AK +G + II +AQ +
Sbjct: 492 AKRLGVPQDIIDKAQSYI 509
>gi|336394748|ref|ZP_08576147.1| mutS family ATPase [Lactobacillus farciminis KCTC 3681]
Length = 784
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 217/413 (52%), Gaps = 49/413 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIK 183
+LD ASEDL+ IR + R L+ ++ Q + + + L+T R R + +K
Sbjct: 146 VLDTASEDLKYIRNQITR----LNDQIRHTMEQYTRGKNTKYLTENLVTLRDDRFVIPVK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
+K G+ + S+SG T ++EP+ V NN SE AEE IL+ L+ +
Sbjct: 202 TEYKTKFG-GVVHDQSASGQTLYIEPQAVVGMNNQLHEAQVSEKAEEIRILNKLSDLVRP 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
EI + + + DL A+A +A+ + PI+S D +++ KHPL+
Sbjct: 261 QIDEILENNEVLAQFDLINAKAKYAKEIKATEPIISK------DHIVDLHDAKHPLI--- 311
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P D V DIK+ + ++ITGPNTGG
Sbjct: 312 ------------DP--------------------DKVVANDIKMGEGYKTMLITGPNTGG 339
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT +MKTLGL LM++AGL++PA + FD + DIGD QS+EQNLSTFS H+ I+
Sbjct: 340 KTITMKTLGLIQLMAQAGLFIPAHEESEIAVFDEVFVDIGDEQSIEQNLSTFSSHMDNII 399
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+I+ VS SLVLIDE+G+GTDP EG A+A +IL+ L + TTHY +L
Sbjct: 400 NIIRKVSEHSLVLIDELGAGTDPQEGAAIAIAILEKLAQSHCFIMATTHYPELKIFAYNT 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ EF ++L+PTYR+L G G SNA NIA +G D+ ++ R Q L++
Sbjct: 460 PETINASMEFDEKSLKPTYRLLIGIPGASNAFNIAARLGMDKGVVNRGQALMD 512
>gi|423591474|ref|ZP_17567505.1| MutS2 protein [Bacillus cereus VD048]
gi|401232842|gb|EJR39340.1| MutS2 protein [Bacillus cereus VD048]
Length = 786
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|228999325|ref|ZP_04158905.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
gi|229006880|ref|ZP_04164512.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228754373|gb|EEM03786.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228760522|gb|EEM09488.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
Length = 786
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 273/557 (49%), Gaps = 84/557 (15%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q+ ++ + + + PL I DI + A G +LSP E+ + T+ +
Sbjct: 45 EMQETTDEAAKVIRLKGHVPL--GGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
I + S+SG T F+EP+ VE NN E R+ + E IL +LT E+A +
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILMMLTEEVALEADTVLAN 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ + +D FA+A +A+ + PI++++ + +N+ +HPL+
Sbjct: 270 VEVIANLDFIFAKAFYAKRIKATKPIVNNERY------MNLRQARHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+P + VP DI + + +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTV 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 349 GICVLMAQSGLHIPVLDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVYNRGARVVATTHYPELKAYGYNREQVINASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-------------------- 531
EF + TL PTY++L G G SNA I+K +G +I RA
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDHVIDRARNHIGTDTNKIENMIAKLEE 528
Query: 532 -QKLVERLRPERQQHRK 547
QK ER E ++HRK
Sbjct: 529 SQKNAEREWNEAEEHRK 545
>gi|431741156|ref|ZP_19530063.1| MutS2 protein [Enterococcus faecium E2039]
gi|430602267|gb|ELB39845.1| MutS2 protein [Enterococcus faecium E2039]
Length = 786
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|301056059|ref|YP_003794270.1| MutS family DNA mismatch repair protein [Bacillus cereus biovar
anthracis str. CI]
gi|423549710|ref|ZP_17526037.1| MutS2 protein [Bacillus cereus ISP3191]
gi|300378228|gb|ADK07132.1| DNA mismatch repair protein, MutS family [Bacillus cereus biovar
anthracis str. CI]
gi|401190506|gb|EJQ97548.1| MutS2 protein [Bacillus cereus ISP3191]
Length = 786
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 IVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|291548598|emb|CBL24860.1| MutS2 family protein [Ruminococcus torques L2-14]
Length = 791
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 270/580 (46%), Gaps = 94/580 (16%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+VQK +I FG + +EES K L +I G L+S
Sbjct: 57 IVQKGRISFGDAAPVEESMKRL---------------------EIGGSLSS--------- 86
Query: 63 SEICAVRRTLRAVNNVWKKLTEAAELDG-DSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
+E+ + R L V + D D L Y LLE L T L +I CI
Sbjct: 87 TELLRISRLLVNAARVKAYGRHDTQEDACDCLDEYFNLLEPL------TPLSNEIDRCI- 139
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRM 178
I D S+D + +R++ N++ + + + +IT R R
Sbjct: 140 ----IGEDEYSDDASSTLKQIRRSINNINDKVHATLTTLVNGSLRTYLQDAIITMRGDRY 195
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV +KA ++ + G+ + SS+G+T F+EP V+ NN L E E IL+ L+
Sbjct: 196 CVPVKAEYRGQV-QGLIHDQSSTGSTLFIEPMAIVKLNNDLKELYAKEQEEIQVILANLS 254
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
E A+ EI+ + ++D FAR A M P+L+ + I I +HP
Sbjct: 255 EEAAQYIEEIRVDYRSLTDLDFIFARGALAMSMRASRPLLNEEGR------IRIREGRHP 308
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL +P K VPI + + + +++ITG
Sbjct: 309 LL---------------DPKKV--------------------VPITVTLGEDFTLLIITG 333
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL LM ++GL++PA + L F I ADIGD QS+EQ+LSTFS H
Sbjct: 334 PNTGGKTVSLKTVGLFCLMGQSGLHIPAGDRSELAVFHQIYADIGDEQSIEQSLSTFSSH 393
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV L+ V SLVL DE+G+GTDP+EG ALA SIL +L R + TTHY++L
Sbjct: 394 MTNIVSFLKKVDERSLVLFDELGAGTDPTEGAALAISILSHLHQRGIRTMATTHYSELKV 453
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
ENA EF +E+LRPTYR+L G G SNA I+ +G II+ A+K
Sbjct: 454 YALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYIIEDAKK----- 508
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
R Q +L L +R +E + A L E DL
Sbjct: 509 RLSEQDVSFEDLLTDLETSKRTIEKEQEEIARLKKEAEDL 548
>gi|427439526|ref|ZP_18924181.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
gi|425788362|dbj|GAC44969.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
Length = 514
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 251/489 (51%), Gaps = 48/489 (9%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L +L+ EI + R LRA V + D+ L ++
Sbjct: 69 LEDIDEPLQRLKIDAILNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 124
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 125 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 182
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 183 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 241
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 242 VAEVHEEQRILQELSALIAPYVDTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 295
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 296 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 320
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 321 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRVFEEIFADIG 380
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 381 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 440
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 441 GAASITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 500
Query: 524 DRKIIQRAQ 532
D II +A+
Sbjct: 501 DEDIITQAR 509
>gi|418069865|ref|ZP_12707142.1| MutS2 family protein [Pediococcus acidilactici MA18/5M]
gi|357536396|gb|EHJ20427.1| MutS2 family protein [Pediococcus acidilactici MA18/5M]
Length = 636
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 256/512 (50%), Gaps = 55/512 (10%)
Query: 26 QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T A +++S Q + L ++ I ++N G +L+P+E+ LR+ N + KK E
Sbjct: 50 ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+L +YS L + T E+ I +D +LD AS DL R + K
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEDHIYQKVDD--YEVLDDASRDLRKARRQFKT 160
Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
+ + L K I LI +++ + V IKAS+K+ +P G ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKASYKFKVP-GTIVDQSSNGQT 219
Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEET-AILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
++E + N ++ + I E+ IL+ LT E+++ I +D V D+ FA
Sbjct: 220 VYIELDLVAKLNE-KLAFQKAVIESESYQILAELTGELSEQRTSILNAIDAVTMFDIIFA 278
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
RA +++ DG+ P ++ INI +HP L+G+
Sbjct: 279 RAKYSREYDGITPQINQAER------INIIQGRHPFLVGT-------------------- 312
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
PVP+D ++ + R ++ITG N GGKT MKT+GL +LM+ AGL
Sbjct: 313 ----------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMAGLQ 356
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA+ L FD + DIGD Q++E LSTFS H+ I I++ R +LVL+DE+GSG
Sbjct: 357 VPAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSG 416
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG LA +IL+ L + L V TTHY ++ K F AA +F ETL P Y
Sbjct: 417 TDPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYV 476
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ G GDS AL IA+ + + +IQRA K +
Sbjct: 477 LQVGEVGDSQALWIAQKMRLPKALIQRAGKYI 508
>gi|229013753|ref|ZP_04170881.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
gi|423489714|ref|ZP_17466396.1| MutS2 protein [Bacillus cereus BtB2-4]
gi|423495437|ref|ZP_17472081.1| MutS2 protein [Bacillus cereus CER057]
gi|423497768|ref|ZP_17474385.1| MutS2 protein [Bacillus cereus CER074]
gi|228747422|gb|EEL97297.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
gi|401150344|gb|EJQ57803.1| MutS2 protein [Bacillus cereus CER057]
gi|401162248|gb|EJQ69606.1| MutS2 protein [Bacillus cereus CER074]
gi|402431005|gb|EJV63077.1| MutS2 protein [Bacillus cereus BtB2-4]
Length = 786
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|210613370|ref|ZP_03289690.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
gi|210151212|gb|EEA82220.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
Length = 791
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 214/410 (52%), Gaps = 47/410 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCLPVKAEYRSQVS-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + A+ E++ + E+D FA+ A M+ PI ++ D
Sbjct: 245 EIQIILARLSVDAAEYIEELRSNYTILGELDFIFAKGALALSMNASRPIFNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL + VPI I +
Sbjct: 299 YIHIREGRHPLLDKKKV-----------------------------------VPITIMLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
E ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIGD QS+
Sbjct: 324 KEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSKLSVFENVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL YL +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQDVDDRSLVLFDELGAGTDPTEGAALAIAILSYLHERGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVFALSTKGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ A+ + Q +L L RR +E + AS EI L
Sbjct: 504 ESAKSHL-----SEQDESFEDLLADLETSRRTIEKEQAEIASYKREIEKL 548
>gi|257897919|ref|ZP_05677572.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257835831|gb|EEV60905.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 786
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPRISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|126698288|ref|YP_001087185.1| DNA mismatch repair protein [Clostridium difficile 630]
gi|123363473|sp|Q189Q3.1|MUTS2_CLOD6 RecName: Full=MutS2 protein
gi|115249725|emb|CAJ67542.1| DNA mismatch repair protein [Clostridium difficile 630]
Length = 792
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 270/519 (52%), Gaps = 50/519 (9%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSILR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTY++L G G SNA I++ +G +I RA++ +
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYI 512
>gi|228967649|ref|ZP_04128670.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402563934|ref|YP_006606658.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
gi|228792025|gb|EEM39606.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401792586|gb|AFQ18625.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
Length = 786
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEVDIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|291544279|emb|CBL17388.1| MutS2 family protein [Ruminococcus champanellensis 18P13]
Length = 793
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 281/567 (49%), Gaps = 70/567 (12%)
Query: 21 QKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV- 78
Q+LL T AL + +Q +ED+ L A SG +S E+ +V R L + ++
Sbjct: 43 QQLLGMTEDALQLSIQYGTPPFYQMEDVCAPLLRAKSGSRISLRELLSVARLLNQIQSLD 102
Query: 79 -WKKLTEAAELDGDSL-QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
W E +E L R +P L EE+I L I + ++ +
Sbjct: 103 DWYCHCENSETSLAYLFSRLAPNPALRDKLERSILSEEEIADGASTALASIRRKIAQSGQ 162
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+R + LD +++ + Q + + + ++T R R + +KA H+ + G+
Sbjct: 163 KLR-------DTLDKMIRSASMQKY----LQESIVTLRDGRYVLPVKAEHRGDV-QGLIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRV 255
+ S++G TYF+EP VE NN ++RL S+ EE I++ L AE +
Sbjct: 211 DTSATGQTYFIEPIAIVEANN-DIRLLESQEQEEIERIITNLCAECGAYADVLIENYHVC 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E++L FA+A A M P L+ D ++ ++ +HPLL
Sbjct: 270 AELNLYFAKANLAAKMKATLPQLTD------DGAVVLKKARHPLL--------------- 308
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K VPID+ + E + ++ITGPNTGGKT ++KT+GL
Sbjct: 309 DPAKV--------------------VPIDVTLGREYQALIITGPNTGGKTVALKTVGLLC 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
M+ GL +PA + + F IL DIGD QS+EQNLSTFS H + +++IL+ +SLV
Sbjct: 349 AMAMCGLLIPAGDGSSVSVFSHILVDIGDAQSIEQNLSTFSAHTNHVIEILKTADAQSLV 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+GSGTDP EG ALA S+++ L+ + + TTHY +L + ENA+ EF L
Sbjct: 409 LLDELGSGTDPVEGAALAVSVIEQLKRQGAKLMTTTHYQELKLYAIETPDVENASCEFDL 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETL+PTYR+L GS G SNA I++ +G +II A+ LV +Q R + + L
Sbjct: 469 ETLQPTYRLLIGSPGKSNAFAISEHLGMPPQIIAYAKTLV-----STEQTRFESVIEKLE 523
Query: 556 EERRKLES------QARTAASLHAEIM 576
R +L++ QAR A H + +
Sbjct: 524 AARAELDTQNQQLRQARLEAQAHEQAL 550
>gi|423660606|ref|ZP_17635775.1| MutS2 protein [Bacillus cereus VDM022]
gi|401302514|gb|EJS08093.1| MutS2 protein [Bacillus cereus VDM022]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|423670115|ref|ZP_17645144.1| MutS2 protein [Bacillus cereus VDM034]
gi|401297475|gb|EJS03084.1| MutS2 protein [Bacillus cereus VDM034]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|431752400|ref|ZP_19541083.1| MutS2 protein [Enterococcus faecium E2620]
gi|430613891|gb|ELB50890.1| MutS2 protein [Enterococcus faecium E2620]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|425059158|ref|ZP_18462510.1| MutS2 family protein [Enterococcus faecium 504]
gi|403036397|gb|EJY47747.1| MutS2 family protein [Enterococcus faecium 504]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|425055377|ref|ZP_18458853.1| MutS2 family protein [Enterococcus faecium 505]
gi|403034046|gb|EJY45521.1| MutS2 family protein [Enterococcus faecium 505]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|420263850|ref|ZP_14766486.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
gi|394769292|gb|EJF49155.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
Length = 787
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 241/468 (51%), Gaps = 71/468 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IVD+L+ + SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVDVLKKIDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLY 579
+ + +E+ L E RRK+ + AA LH E+ Y
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAY 557
>gi|373112741|ref|ZP_09526968.1| MutS2 protein [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
gi|371654881|gb|EHO20242.1| MutS2 protein [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
Length = 518
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 252/498 (50%), Gaps = 52/498 (10%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICSLTEKIKLIGTYLEVDELWDINMNLRFFRIFQAQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + ++ + L +E+ I +D + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMRQVSPLRLIEDLISKAVDSEKQI-KDEASLDLRDIRIHKKMLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ A + ++T+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEASIAVAFQERIVTERDGRMVVPVKVDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + E+ + +L +D A+A F ++ C +
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFG--LEEACHV 290
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+ Q + +E +HP + +
Sbjct: 291 PTIQGK----EILYLEKARHPFIPKEKV-------------------------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + R+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA H ++ +F
Sbjct: 315 ---VPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEHSKIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + +IL V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ A++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLV 535
AK +G + II +AQ +
Sbjct: 492 AKRLGVPQDIIDKAQSYI 509
>gi|300854687|ref|YP_003779671.1| MutS-like protein [Clostridium ljungdahlii DSM 13528]
gi|300434802|gb|ADK14569.1| MutS related protein [Clostridium ljungdahlii DSM 13528]
Length = 637
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 263/523 (50%), Gaps = 67/523 (12%)
Query: 22 KLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEI---CAVRRTLRAVNN 77
K LN+TS A++ + + L I +I I+++ G +L P ++ C R R + N
Sbjct: 45 KRLNETSEGRALLDTCSYIPLEGIFNIDNIIDNVEKGMVLEPEDLTTLCNFLRGCRKIKN 104
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K + Y+P L N E+ + + ++ AS++L
Sbjct: 105 FMK-----------DKEFYAPTLSSYGNSITEFTFIEEEI-ELSIRGSLVDSNASKELRK 152
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR R +EN +S ++ + + I + I+KR R + IKA++K +P
Sbjct: 153 IR----RLIENTESKIQDKLEKFLKNSSNKKYIQEFFISKRNGRYTIPIKAAYKNQVPGN 208
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + SS G+T F+EP + L E EE ILS LTA + + REIK M+
Sbjct: 209 I-VETSSKGSTIFIEPNNISKSTEELTALKAEESIEEYKILSTLTALVFDNLREIKINME 267
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ E D+ FA+A +++ ++G+ P ++ + INI KHPLL G
Sbjct: 268 VIEEYDMIFAKAKYSKAINGMKPKINDYGY------INIIKGKHPLLKG----------- 310
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
DV VP+D KV + R ++ITGPN GGKT +KT+G+
Sbjct: 311 -------DV------------------VPLDFKVGDDYRTLIITGPNAGGKTVVLKTVGI 345
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+L ++G ++ A + F+ I DIGD QS+E LSTFS HI + DI++ ++ +
Sbjct: 346 LTLAVQSGFHISAAEGTEISVFEKIFVDIGDDQSIENALSTFSSHIKNLADIIDNSNKST 405
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
L+L DEIGSGT+P+EG LA +IL+ + + V TTHY ++ + F+NAA +F
Sbjct: 406 LILCDEIGSGTEPNEGAGLAIAILEEFYHKGCITVATTHYGEIKNFSEIHEDFQNAAMQF 465
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ETL P Y+++ G +G+SNAL I+K +G ++++A+ ++
Sbjct: 466 ESETLEPLYKLVIGKSGESNALWISKKMGIKNSVLEKAESYIK 508
>gi|293570971|ref|ZP_06682015.1| MutS2 family protein [Enterococcus faecium E980]
gi|430841856|ref|ZP_19459773.1| MutS2 protein [Enterococcus faecium E1007]
gi|431077718|ref|ZP_19495183.1| MutS2 protein [Enterococcus faecium E1604]
gi|431112285|ref|ZP_19497661.1| MutS2 protein [Enterococcus faecium E1613]
gi|431586437|ref|ZP_19520952.1| MutS2 protein [Enterococcus faecium E1861]
gi|431737011|ref|ZP_19525967.1| MutS2 protein [Enterococcus faecium E1972]
gi|291608955|gb|EFF38233.1| MutS2 family protein [Enterococcus faecium E980]
gi|430493674|gb|ELA69965.1| MutS2 protein [Enterococcus faecium E1007]
gi|430566133|gb|ELB05254.1| MutS2 protein [Enterococcus faecium E1604]
gi|430569239|gb|ELB08256.1| MutS2 protein [Enterococcus faecium E1613]
gi|430593615|gb|ELB31601.1| MutS2 protein [Enterococcus faecium E1861]
gi|430599387|gb|ELB37093.1| MutS2 protein [Enterococcus faecium E1972]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|229113364|ref|ZP_04242822.1| DNA mismatch repair protein [Bacillus cereus Rock1-15]
gi|228670086|gb|EEL25471.1| DNA mismatch repair protein [Bacillus cereus Rock1-15]
Length = 633
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSIIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|255099823|ref|ZP_05328800.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-63q42]
gi|255305708|ref|ZP_05349880.1| putative DNA mismatch repair protein [Clostridium difficile ATCC
43255]
Length = 792
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 269/519 (51%), Gaps = 50/519 (9%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTY++L G G SNA I++ +G +I RA++ +
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYI 512
>gi|430882566|ref|ZP_19484114.1| MutS2 protein [Enterococcus faecium E1575]
gi|430556811|gb|ELA96306.1| MutS2 protein [Enterococcus faecium E1575]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|423449119|ref|ZP_17425998.1| MutS2 protein [Bacillus cereus BAG5O-1]
gi|401128568|gb|EJQ36257.1| MutS2 protein [Bacillus cereus BAG5O-1]
Length = 786
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|229829396|ref|ZP_04455465.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
14600]
gi|229791827|gb|EEP27941.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
14600]
Length = 816
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 211/394 (53%), Gaps = 53/394 (13%)
Query: 149 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 208
L+ +L A Q G +IT R R C+ ++A +K +P G+ + SSSGAT F+E
Sbjct: 171 LNRMLSSSARDYLQDG-----VITMRDGRYCLPVRAEYKNYVP-GMVHDSSSSGATLFIE 224
Query: 209 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
P V NN L E E IL L+ ++ ++ I+ DR+ E+D FA+ A
Sbjct: 225 PMSVVNLNNELRELEGKEEEEIARILRSLSDQVLENIETIQIDFDRLAELDFIFAKGQLA 284
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
M +SQ + + I+++ +HPLL
Sbjct: 285 ADMS------ASQPDFNEEGIISLKAARHPLL---------------------------- 310
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
+ VPIDI + ++V+TGPNTGGKT S+KT GL +LM +AGL++PA++
Sbjct: 311 -------DKNIVVPIDISLGQNYNLLVVTGPNTGGKTVSLKTCGLLTLMGQAGLHIPARD 363
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------SRESLVLIDEIGS 442
H +L FD + ADIGD QS+EQ+LSTFS H++ IV IL+ V ++LVL DE+ +
Sbjct: 364 HSQLAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVHILDGVDSVLANGHDALVLFDELCA 423
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALAT+IL L R + TTHY++L ENA+ EFSLETL PTY
Sbjct: 424 GTDPAEGAALATAILDRLHRRQVRVMATTHYSELKVYALSTEGVENASCEFSLETLSPTY 483
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
R+L G G SNA I+ +G II+ AQ ++
Sbjct: 484 RLLIGIPGKSNAFAISSKLGLAADIIRDAQSRID 517
>gi|423612727|ref|ZP_17588588.1| MutS2 protein [Bacillus cereus VD107]
gi|401244715|gb|EJR51074.1| MutS2 protein [Bacillus cereus VD107]
Length = 786
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 266/519 (51%), Gaps = 63/519 (12%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + + + S PL I DI + A G +LSP+E+ + T+ + +
Sbjct: 47 QETTDEAAKVIRLKGSVPL--GGISDIRPNVKRAKIGSMLSPNELLDIANTMYGSRQMKR 104
Query: 81 KLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + E +G L P+LE + L +LE+KI CI ++ D AS+ L IR
Sbjct: 105 FIDDMIE-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIR 158
Query: 140 AE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ R E L+++ + AQ + I +T R R + +K ++ + GI
Sbjct: 159 NQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIV 213
Query: 196 LNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ S+SG T F+EP+ VE NN E R+ + E IL +LT E+A + ++
Sbjct: 214 HDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I RA+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDRAR 509
>gi|229135384|ref|ZP_04264173.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
gi|228648080|gb|EEL04126.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
Length = 786
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 256/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G LQ +L
Sbjct: 65 LGGISDIRANIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVELQ----IL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|392531352|ref|ZP_10278489.1| DNA mismatch repair protein [Carnobacterium maltaromaticum ATCC
35586]
Length = 634
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 259/517 (50%), Gaps = 61/517 (11%)
Query: 25 NQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
N+T A A++ ++ + + I + G LL S + V LR+ + ++
Sbjct: 48 NETEEARALLDAKLTMPFMGLSSIDVFMEQLEKGLLLEASSLIDVADFLRS-GRMIRRFM 106
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---A 140
E E +L Y+ ++ + TE+E++I F I + D AS++L IR A
Sbjct: 107 EKYESLAPTLTMYA------RSISEFTEIEDEIYFSIKNGQ--VADEASKELRRIRRLIA 158
Query: 141 ERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
E++ +E L LK Q I + ++K+ R + IKA++K + G + S
Sbjct: 159 EKESKIEERLSKFLKNKDNQ----KQIQEFFVSKKNERFTIPIKAAYKNQVA-GTIIETS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
S G T F+EP + N+ L E E IL+ L+ I ++ I+ ++ + E D
Sbjct: 214 SKGTTVFIEPTAVTKLNDELAMLKVEESTEIYQILATLSGLILENLVPIQLNLETIAEYD 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
+ FAR +++ + GV P L+ + ++ +++ HPL+ ++
Sbjct: 274 MIFARGKYSRLIQGVTPKLNQRGYIHLVNAV------HPLIEANA--------------- 312
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VP++ V + R ++ITGPN GGKT +KT+GL +LM+
Sbjct: 313 ---------------------VPLNFTVGEDYRGLIITGPNAGGKTVVLKTVGLLALMTL 351
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
G+ LPA + F+ I DIGD QSLE LSTFS HI I DI+++ R SLVL DE
Sbjct: 352 LGIQLPADEGTEMGLFEGIFVDIGDSQSLENALSTFSSHIQNIADIMQVAPRNSLVLFDE 411
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
IGSGT+P+EG ALA +IL+ R + V TTHY ++ + F NAA F+ TL
Sbjct: 412 IGSGTEPNEGAALAIAILEEFYQRGNIVVATTHYGEIKRYSEIHPDFINAAMAFNQATLT 471
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
P Y++L G +G+SNAL IAK + +IQ+AQ+ +E
Sbjct: 472 PLYQLLMGESGESNALWIAKKMNLKEHVIQQAQRYME 508
>gi|386715018|ref|YP_006181341.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
gi|384074574|emb|CCG46067.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
Length = 781
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 265/546 (48%), Gaps = 66/546 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI L G +LS E V T+ + + + EA E + L+
Sbjct: 65 LGGIFDIKPSLKRTTIGGILSALESLDVASTIYGGRQLKRFIEEAEEPEMPKLR------ 118
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
E++ L ELE+ I CID + ++D AS+ L IR+ R R E+ +DS K
Sbjct: 119 EIVTGILPLKELEQSIRSCID-EHGNVMDGASDKLRTIRS-RVRTYESRVRDKMDSFTKS 176
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ A ++T R R + +K ++ + GI + SSSGAT F+EP+ V+
Sbjct: 177 KTKMLSDA------IVTIRNERYVLPVKQEYRGAI-GGIVHDQSSSGATLFIEPQSVVDL 229
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL L+ EIA + + R+ +D FARA + M
Sbjct: 230 NNQLQEARVQEKHEIEKILKELSEEIADHYSALYENVTRLGHVDFMFARAKLGKQMKASM 289
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P ++ + + + +HPL+ N E V
Sbjct: 290 PSMNDEGRIKMLQA------RHPLI-----------------------NEEEVV------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
P DI++ + +VITGPNTGGKT ++K +GL +LM+++GL +PA + + F
Sbjct: 315 ------PNDIEIGEDYTSIVITGPNTGGKTVTLKLVGLCTLMAQSGLQIPALDGCEMAVF 368
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + ADIGD QS+EQ+LSTFS H++ IVDIL+ V ++LVL DE+G+GTDP EG ALA S
Sbjct: 369 EEVYADIGDEQSIEQSLSTFSSHMTNIVDILKHVDDKTLVLFDELGAGTDPQEGAALAMS 428
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R + TTHY +L NA+ EF ++TL+PTYR+L G G SNA
Sbjct: 429 ILDEVVNRNARVIATTHYPELKAYGYNREGVINASVEFDIQTLKPTYRLLIGVPGRSNAF 488
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I++ +G +I AQ E++ + Q + SL E +R E A L E
Sbjct: 489 EISRKLGLHESVITSAQ---EKIGVDSQS--VENMIASLEESKRGAEQDYEEAERLLQEA 543
Query: 576 MDLYRE 581
DL E
Sbjct: 544 QDLRNE 549
>gi|229099010|ref|ZP_04229945.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|229118041|ref|ZP_04247401.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|407707068|ref|YP_006830653.1| oxidoreductase, Gfo/Idh/MocA [Bacillus thuringiensis MC28]
gi|423377604|ref|ZP_17354888.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|423440711|ref|ZP_17417617.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|423463776|ref|ZP_17440544.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|423533128|ref|ZP_17509546.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|423541608|ref|ZP_17517999.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|423547839|ref|ZP_17524197.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|423622372|ref|ZP_17598150.1| MutS2 protein [Bacillus cereus VD148]
gi|228665490|gb|EEL20972.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|228684508|gb|EEL38451.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|401171141|gb|EJQ78374.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|401178276|gb|EJQ85456.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|401261512|gb|EJR67672.1| MutS2 protein [Bacillus cereus VD148]
gi|401638453|gb|EJS56203.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|402418842|gb|EJV51131.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|402421320|gb|EJV53580.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|402464361|gb|EJV96057.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|407384753|gb|AFU15254.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis MC28]
Length = 786
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQAR 509
>gi|311030652|ref|ZP_07708742.1| MutS family DNA mismatch repair protein [Bacillus sp. m3-13]
Length = 643
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 229/406 (56%), Gaps = 43/406 (10%)
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS++L +R + E + + ++++ + + + L++ R R + +K +K
Sbjct: 144 DYASKELLKVRKQIATLEERIKNRIEQLVKSTKYSKYLQENLVSTRNGRYVIPVKKEYKN 203
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G L+VS+SG+T +MEP+ + L E AEE IL LT + + E+EI
Sbjct: 204 NI-KGSVLDVSASGSTVYMEPEEISIIQDSISMLKFQEEAEEEQILFALTGLVQEHEKEI 262
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K MD ++ D+ FA+A + M+G P ++ + HV I +EG +HPLL ++
Sbjct: 263 KLAMDLMVSYDVIFAKAKHSLLMNGTSPQIN-EHHV-----IRLEGARHPLLGKNA---- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VP+++ + + +VITGPNTGGKT ++
Sbjct: 313 --------------------------------VPLNLVIGEDYDALVITGPNTGGKTVTI 340
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM++ G+++PA+ + F +L DIGD QS+EQ+LSTFS + I+ IL
Sbjct: 341 KTVGLLTLMAQCGMHIPAEKGSEIAIFHKVLVDIGDGQSIEQSLSTFSSRVKNIIGILAE 400
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+ ++LVL+DE+GSGTDP+EG+ LATSIL+ L ++ + TTHY+++ ++ F N
Sbjct: 401 STPQTLVLLDELGSGTDPAEGMGLATSILEELYNKGTTMLATTHYSEIKEFANEQKGFCN 460
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+ EF++ETL+PTYR++ G GDS A IA +G K+I+RA ++
Sbjct: 461 GSMEFNVETLKPTYRLIVGKGGDSQAFAIALRLGMHPKLIERAHQI 506
>gi|228959681|ref|ZP_04121358.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423628578|ref|ZP_17604327.1| MutS2 family protein [Bacillus cereus VD154]
gi|228799984|gb|EEM46924.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401269103|gb|EJR75138.1| MutS2 family protein [Bacillus cereus VD154]
Length = 633
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 166/581 (28%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + KK
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
E ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 106 MLGKEF-------FAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|49478686|ref|YP_038600.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|81696639|sp|Q6HCX6.1|MUTS2_BACHK RecName: Full=MutS2 protein
gi|49330242|gb|AAT60888.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 786
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + +Q + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNSQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|402313005|ref|ZP_10831928.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
gi|400367581|gb|EJP20597.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
Length = 785
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 270/544 (49%), Gaps = 74/544 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L LS ++DI+ L G LS E+ V L A + + E D D L+ Y
Sbjct: 63 LALSEVKDISDSLKRLEIGSSLSQPELMKVLSILNAASKAITYGLHSEEEDYDVLEEYFR 122
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L+ +K +L++++ CI + I+ D AS +L IR R ++ ++S +
Sbjct: 123 SLDEIK------DLKKELSRCIISEE-IMADNASPELSHIR----RKIKQINSKMHTELN 171
Query: 159 QIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
I A + +IT+R C+ IK+ +K + G+ + SS+G+T F+EP + N
Sbjct: 172 NILNAHREYLMDAVITQRDGAYCLPIKSEYKNKV-SGVVHDQSSTGSTVFIEPIAVIRMN 230
Query: 217 NMEVRLSNSEIAEETAIL---SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
N L+ E E IL SLL A+ +S RE + + +D +A+A ++ M+
Sbjct: 231 NELKSLAMDEKKEIEKILENLSLLAAQYIESLRENAKTL---IFLDFVYAKANLSKKMNA 287
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
P +S+ + INI+ +HPLL +
Sbjct: 288 SEPKFNSKHY------INIKEGRHPLLDAKKV---------------------------- 313
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPI+I + +++ITGPNTGGKT S+KT+GL +LM ++GL++PA L
Sbjct: 314 -------VPINISLGEHYDLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSELS 366
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F + ADIGD QS+EQ+LSTFSGH+ IV IL SL L DE+ +GTDP+EG ALA
Sbjct: 367 VFSDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANSLCLFDELCAGTDPTEGAALA 426
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL +L + TTHY++L + ENA+ EF + TL PTYRIL G G SN
Sbjct: 427 ISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEFDVATLSPTYRILIGVPGKSN 486
Query: 514 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLE 562
A IA +G II A + L+ RL +RQ K +L S+ + +R++E
Sbjct: 487 AFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDRQTIEKDKL--SIQKYKREIE 544
Query: 563 SQAR 566
S R
Sbjct: 545 SLKR 548
>gi|217962033|ref|YP_002340603.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH187]
gi|222098016|ref|YP_002532073.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus Q1]
gi|229141279|ref|ZP_04269817.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|375286547|ref|YP_005106986.1| MutS2 family protein [Bacillus cereus NC7401]
gi|423355034|ref|ZP_17332659.1| MutS2 protein [Bacillus cereus IS075]
gi|423570780|ref|ZP_17547025.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|423603770|ref|ZP_17579663.1| MutS2 protein [Bacillus cereus VD102]
gi|226723047|sp|B7HRJ3.1|MUTS2_BACC7 RecName: Full=MutS2 protein
gi|254766387|sp|B9J054.1|MUTS2_BACCQ RecName: Full=MutS2 protein
gi|217064711|gb|ACJ78961.1| MutS2 family protein [Bacillus cereus AH187]
gi|221242074|gb|ACM14784.1| DNA mismatch repair protein, MutS family [Bacillus cereus Q1]
gi|228642060|gb|EEK98353.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|358355074|dbj|BAL20246.1| MutS2 family protein [Bacillus cereus NC7401]
gi|401085211|gb|EJP93454.1| MutS2 protein [Bacillus cereus IS075]
gi|401203407|gb|EJR10246.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|401246534|gb|EJR52881.1| MutS2 protein [Bacillus cereus VD102]
Length = 786
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|427440662|ref|ZP_18924934.1| DNA mismatch repair protein MutS2 [Pediococcus lolii NGRI 0510Q]
gi|425787369|dbj|GAC45722.1| DNA mismatch repair protein MutS2 [Pediococcus lolii NGRI 0510Q]
Length = 636
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 250/511 (48%), Gaps = 53/511 (10%)
Query: 26 QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T A +++S Q + L ++ I ++N G +L+P+E+ LR+ N + KK E
Sbjct: 50 ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+L +YS L + T EE I +D +LD AS DL R + K
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEEHIYQKVDD--YEVLDDASRDLRKARRQFKT 160
Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
+ + L K I LI +++ + V IK S+K+ +P G ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKVSYKFKVP-GTIVDQSSNGQT 219
Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
++E + N +E IL+ LT E+++ I +D V D+ FAR
Sbjct: 220 VYIELDLVAKLNEKRAFQKAVIESESYQILAELTGELSEQRTSILNAIDAVTMFDIIFAR 279
Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
A +++ G+ P ++ INI +HP L+G+
Sbjct: 280 AKYSREYGGITPQINQAER------INIIQGRHPFLVGA--------------------- 312
Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
PVP+D ++ + R ++ITG N GGKT MKT+GL +LM+ AGL +
Sbjct: 313 ---------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMAGLQV 357
Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
PA+ L FD + DIGD Q++E LSTFS H+ I I++ R +LVL+DE+GSGT
Sbjct: 358 PAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSGT 417
Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
DP+EG LA +IL+ L + L V TTHY ++ K F AA +F ETL P Y +
Sbjct: 418 DPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYVL 477
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G GDS AL IAK + + +IQRA K +
Sbjct: 478 QVGEVGDSQALWIAKKMRMPKVLIQRADKYI 508
>gi|254974324|ref|ZP_05270796.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-66c26]
gi|255091720|ref|ZP_05321198.1| putative DNA mismatch repair protein [Clostridium difficile CIP
107932]
gi|255313448|ref|ZP_05355031.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-76w55]
gi|255516136|ref|ZP_05383812.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-97b34]
gi|255649232|ref|ZP_05396134.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-37x79]
gi|260682406|ref|YP_003213691.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260686005|ref|YP_003217138.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384359986|ref|YP_006197838.1| DNA mismatch repair protein [Clostridium difficile BI1]
gi|260208569|emb|CBA61251.1| putative DNA mismatch repair protein [Clostridium difficile CD196]
gi|260212021|emb|CBE02571.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
Length = 792
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 269/519 (51%), Gaps = 50/519 (9%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS ++A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSEISAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTY++L G G SNA I++ +G +I RA++ +
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYI 512
>gi|270290146|ref|ZP_06196372.1| MutS2 family protein [Pediococcus acidilactici 7_4]
gi|270281683|gb|EFA27515.1| MutS2 family protein [Pediococcus acidilactici 7_4]
Length = 636
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 252/511 (49%), Gaps = 53/511 (10%)
Query: 26 QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T A +++S Q + L ++ I ++N G +L+P+E+ LR+ N + KK E
Sbjct: 50 ETKEARIIIESGQYIPLLGLKQINRLMNKIDKGVILTPAELIEFADFLRS-NRMLKKFFE 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+L +YS L + T E+ I +D +LD AS DL R + K
Sbjct: 109 KNRYQTPTLYKYSQAL------SKFTTTEDHIYQKVDD--YEVLDDASRDLRKARRQFKT 160
Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
+ + L K I LI +++ + V IKAS+K+ +P G ++ SS+G T
Sbjct: 161 IKDEIQDKLMKFLRSPKNKPMIQDVLIVEKQGSITVPIKASYKFKVP-GTIVDQSSNGQT 219
Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
++E + N +E IL+ LT+E+++ I +D V D+ FAR
Sbjct: 220 VYIELDLVAKLNEKRAFQKAVIESESYQILAELTSELSEQRTSILNAIDAVTMFDIIFAR 279
Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
A +++ DG+ P ++ INI +HP L+G+
Sbjct: 280 AKYSREYDGITPQINQAER------INIIQGRHPFLVGT--------------------- 312
Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
PVP+D ++ + R ++ITG N GGKT MKT+GL +LM+ GL +
Sbjct: 313 ---------------PVPLDFQLGKDYRGLIITGANAGGKTIVMKTVGLLTLMAMVGLQV 357
Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
PA+ L FD + DIGD Q++E LSTFS H+ I I++ R +LVL+DE+GSGT
Sbjct: 358 PAQAGTELAVFDQLFVDIGDEQNIENQLSTFSAHMKNIAKIVQKAGRNTLVLLDELGSGT 417
Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
DP+EG LA +IL+ L + L V TTHY ++ K F AA +F ETL P Y +
Sbjct: 418 DPNEGAGLAIAILEDLYRKGALIVATTHYGEIKNFTKKHADFTPAAMKFDRETLTPKYVL 477
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G GDS AL IA+ + + +IQRA K +
Sbjct: 478 QVGEVGDSQALWIAQKMRLPKALIQRAGKYI 508
>gi|229105178|ref|ZP_04235827.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
gi|228678104|gb|EEL32332.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
Length = 786
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVREKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|229917597|ref|YP_002886243.1| DNA mismatch repair protein MutS domain-containing protein
[Exiguobacterium sp. AT1b]
gi|229469026|gb|ACQ70798.1| DNA mismatch repair protein MutS domain protein [Exiguobacterium
sp. AT1b]
Length = 638
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 262/525 (49%), Gaps = 72/525 (13%)
Query: 21 QKLLNQTSAALAMMQSQP----LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+K L +TS A A++ + + +S +E I G L + L +E+ AV LR
Sbjct: 44 KKRLQETSEARAILDATSHVPFIGVSDMETIIGKLQRGIQ---LEATELEAVAEFLRGAR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + + E + ++PLL LEE I I ++ D AS++L
Sbjct: 101 KLKRFMLEH--------EFFAPLLSAYAAGMGEWRTLEEDITQAIRAGQVV--DEASKEL 150
Query: 136 ELIRAE----RKRNMENLDSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
+ IR + R E L LK A ++ Q G +TK++ R + IKAS+K+ +
Sbjct: 151 KRIRKQVDILEGRIEERLTKFLKSAANREMIQDG-----FVTKKQDRFTIPIKASYKHKV 205
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
G ++ S+ G T F+EP+ + N V E E +L+ LT + + +I+
Sbjct: 206 A-GTIVDTSNRGTTVFIEPEAIAKLNAELVVKRTEEAVEVYQVLATLTGAVTEVLPDIES 264
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+D + + D+ FA+ ++Q +DGV P HV+ I ++ ++HPLL
Sbjct: 265 TLDVIAQYDMVFAKGKYSQSIDGVTP------HVNVSGRIRLKQVRHPLL---------- 308
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+ VP+D + + R ++ITGPN GGKT +KT
Sbjct: 309 ---------------------------ESAVPLDFAIGTDYRGLIITGPNAGGKTVVLKT 341
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL SLM+ GL++PA + FD + DIGD+Q LE LSTFS H+ + +I++
Sbjct: 342 IGLLSLMTMTGLHIPAHTDTVISTFDEVFVDIGDNQDLESALSTFSAHMYNVANIMQTAG 401
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+ SL+L DEIGSGT+P+EG ALA +IL+ R + V +THY ++ + F NAA
Sbjct: 402 KRSLLLFDEIGSGTEPNEGAALAIAILEAAYKRGAIVVASTHYGEIKSYSEAHPDFMNAA 461
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+F ETL P YR+L G +GDSNAL IA+ + I+++A + +
Sbjct: 462 MQFDPETLEPKYRLLMGQSGDSNALFIARKMKLPESILKQASRYM 506
>gi|423528674|ref|ZP_17505119.1| MutS2 family protein [Bacillus cereus HuB1-1]
gi|402450623|gb|EJV82455.1| MutS2 family protein [Bacillus cereus HuB1-1]
Length = 633
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLQKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I + + AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|423373498|ref|ZP_17350837.1| MutS2 protein [Bacillus cereus AND1407]
gi|401096462|gb|EJQ04509.1| MutS2 protein [Bacillus cereus AND1407]
Length = 786
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 280/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|404483872|ref|ZP_11019087.1| MutS2 family protein [Clostridiales bacterium OBRC5-5]
gi|404342884|gb|EJZ69253.1| MutS2 family protein [Clostridiales bacterium OBRC5-5]
Length = 785
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 281/564 (49%), Gaps = 69/564 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E QK T+AA+ ++ + L LS ++DI+ L G LS E+ V L +
Sbjct: 40 ISEIQKNQAYTTAAVDRIRLKGNLALSEVKDISDSLKRLEIGSSLSQPELMKV---LSIL 96
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
N K +T + D Y L E ++ + + +L++++ CI + I+ D AS +L
Sbjct: 97 NAASKAITYGLHSEADD---YDVLEEYFRSLDEIKDLKKELSRCIISEE-IMADNASPEL 152
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR R ++ ++S + I A + +IT+R C+ IK+ +K + G
Sbjct: 153 SHIR----RKIKQINSKMHTELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-G 207
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + SS+G+T F+EP + NN L+ E E IL L+ A+ E++
Sbjct: 208 VVHDQSSTGSTVFIEPIAVIRMNNELKSLAMDEKKEIEKILENLSLLAAQYIEELRENAK 267
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
++ +D +A+A ++ M+ P +S+ + INI+ +HPLL +
Sbjct: 268 TLIFLDFVYAKANLSKKMNASEPKFNSKHY------INIKEGRHPLLDAKKV-------- 313
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPI+I + +++ITGPNTGGKT S+KT+GL
Sbjct: 314 ---------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGL 346
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM ++GL++PA L F + ADIGD QS+EQ+LSTFSGH+ IV IL S
Sbjct: 347 FTLMGQSGLHIPAFEGSELSVFTDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANS 406
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
L L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+ EF
Sbjct: 407 LCLFDELCAGTDPTEGAALAISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEF 466
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPER 542
+ TL PTYRIL G G SNA IA +G II A + L+ RL +R
Sbjct: 467 DVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDR 526
Query: 543 QQHRKSELYQSLMEERRKLESQAR 566
Q K +L S+ + +R++ES R
Sbjct: 527 QIIEKDKL--SIQKYKREIESLKR 548
>gi|293378174|ref|ZP_06624343.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
gi|292643038|gb|EFF61179.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
Length = 786
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ N E V P DI + + + +VITGP
Sbjct: 311 I-----------------------NQEKVV------------PNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ V+IL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVEILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|160942186|ref|ZP_02089501.1| hypothetical protein CLOBOL_07076 [Clostridium bolteae ATCC
BAA-613]
gi|158435077|gb|EDP12844.1| hypothetical protein CLOBOL_07076 [Clostridium bolteae ATCC
BAA-613]
Length = 680
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 260/518 (50%), Gaps = 62/518 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
L S + Q L + + P+ +E A + +V G+LL+P E+ + L AV
Sbjct: 58 LRRSMRDTTQARQMLELAGTPPM--PAMEHTAEFVARSVRGELLTPEEMEEIGMFLAAVR 115
Query: 77 NVWKKLTEAAELDGDSLQRYS-PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
V L D Y PL +N +TEL+E+I I + + DRAS L
Sbjct: 116 RVRSYL--------DKGMSYGIPLSCYGENLRLMTELKEEIEGAI--RHGRVDDRASNTL 165
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR R+++ L+ +K A + Q + + + R R+C+ +K +K +P G
Sbjct: 166 RDIR----RDLQLLEEKIKDKAEALLKSQKKFMAESFLVTRNGRLCLPVKKEYKSKIP-G 220
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
++ SSSG+T F+EP+ + L E EE IL L IA E K +
Sbjct: 221 STIDRSSSGSTVFIEPETIARMQDEIEGLRIEEDCEERRILYTLMDRIAMEEDGFKENLA 280
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++D FA+ + MD P +++Q + + +HPLL G
Sbjct: 281 LLAKLDFVFAKGKLSAQMDAREPAVNTQGIICLKEA------RHPLLPG----------- 323
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+SN VP+D K+ ETR +VITGPNTGGKT ++KT+GL
Sbjct: 324 DSN------------------------VPLDFKLGGETRGMVITGPNTGGKTVAIKTVGL 359
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+ +GL+LP + + +L+L DIGD Q + NLSTFS HI+ +++IL+ + ES
Sbjct: 360 FVLMACSGLHLPCREAD-IAMRNLVLCDIGDGQDILDNLSTFSAHITNVLEILKRATGES 418
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LV++DE+GSGTDP+EG+ +A +IL+ LR R L +VTTHY ++ + +A F
Sbjct: 419 LVILDELGSGTDPAEGMGIAIAILEQLRLRGCLYLVTTHYPEVKTYAGRHAELISARMAF 478
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
E LRP YR+ G TGDS AL IAK +G +I+ A
Sbjct: 479 DRENLRPLYRLEMGKTGDSCALYIAKRLGMPEDMIRTA 516
>gi|336428866|ref|ZP_08608841.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336004409|gb|EGN34474.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 792
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 201/363 (55%), Gaps = 42/363 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
LIT R R C+ +KA ++ +P G+ + SS+G+T F+EP V NN L E E
Sbjct: 187 LITSRNGRYCIPVKAEYRSQVP-GMIHDQSSTGSTLFVEPAAVVNLNNQMRELEIKEQEE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+L+ L+A++A+ +I + +D FA+A A + PI + + H+
Sbjct: 246 IEKVLASLSAQVAEHTEDIAENQRILTLLDFIFAKASLALEQNATEPIFN-EDHI----- 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+NI G +HPLL D + + VPIDI++
Sbjct: 300 LNIRGARHPLL--------------------DKKKT---------------VPIDIRLGR 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++ITGPNTGGKT S+KT GL LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 325 DYDLLIITGPNTGGKTVSLKTTGLFCLMGQAGLHIPALDRSELSIFREVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV IL+ +SL L DE+G+GTDP+EG ALA +IL +L DR +
Sbjct: 385 QSLSTFSSHMTSIVSILKNADADSLCLFDELGAGTDPTEGAALAIAILNFLHDRGIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L + ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 445 TTHYSELKVYALSTSFVENACCEFDVESLRPTYRLLIGIPGKSNAFAISSRLGLSDDIIN 504
Query: 530 RAQ 532
A+
Sbjct: 505 SAR 507
>gi|228987801|ref|ZP_04147910.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771849|gb|EEM20306.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 786
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PTY++L G G SNA I+K +G ++I++A+
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQAR 509
>gi|206901081|ref|YP_002251021.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
gi|206740184|gb|ACI19242.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
Length = 778
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/564 (29%), Positives = 288/564 (51%), Gaps = 78/564 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
S I+++ ++ A G ++ P E + RT+ +W KL + E +++ +P
Sbjct: 64 FSGIKNLEIYIDKAEKGGIVYPDEFEEIVRTI----EIWSKLRDYQE----KVRKIAP-- 113
Query: 101 ELLKNC-NFLTELEEKIGFCI-DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L +N + L +L +I CI D + ++D AS +L+ IR +++R + + L+ +
Sbjct: 114 NLWRNTLHNLHDLYIQIRRCIQDGE---VVDSASPELKQIRQKKERLNQKIKETLENIIQ 170
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ +++ D+ +IT R R V I+ + + GI + S+SG T ++EP+ VE NN
Sbjct: 171 KEWRSYLQDQ-IITIRHGRYVVPIRQEFRGKI-QGIVHDQSTSGLTVYVEPQVIVELNNQ 228
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L + E E IL+ LT+ + + EI + E+D +A+ +A+ + PIL
Sbjct: 229 IALLESEEKREIERILTRLTSILLSYKEEILENLRTSFELDFVYAKIKWAEKHKAITPIL 288
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ + I + +HP L +
Sbjct: 289 EKEKPL-----IILREARHPFL------------------------------------GE 307
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI ++V +VITGPNTGGKT ++KT+GL L+++AG+ +PAK L F+ +
Sbjct: 308 KAVPISLEVGRTFNTLVITGPNTGGKTVTLKTIGLFVLLNQAGIPVPAKEGTVLGIFNQV 367
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRES----LVLIDEIGSGTDPSEGVALAT 454
ADIGD QS+EQNLSTFS H++ I+ ++ + R L+LIDE+G+GTDP EG ALA
Sbjct: 368 FADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKRVLILIDELGAGTDPQEGAALAV 427
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
++L+Y ++ + V+ TH+ L + K ENA+ EF +L+P Y+++ G G SNA
Sbjct: 428 ALLEYFHEKGTINVIATHFPQLKVIASKYPGMENASMEFDEISLKPLYKVVMGIPGKSNA 487
Query: 515 LNIAKSIGFDRKIIQRAQKLV----------------ERLRPERQQHRKSELYQSLMEER 558
+ I+K +G RKI+ R+ L+ +R R E + + ++L + L EE+
Sbjct: 488 ILISKRLGLPRKILDRSLSLLSEDEIKLEEVIGELQRDRRRYEEEIEKINKLKRDLQEEK 547
Query: 559 RKLESQARTAASLHAEIMDLYRED 582
RK++ + A++ Y+E+
Sbjct: 548 RKIQEEKEMLEKEKAQLKAKYKEE 571
>gi|257867419|ref|ZP_05647072.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257873749|ref|ZP_05653402.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
gi|257801475|gb|EEV30405.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257807913|gb|EEV36735.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
Length = 787
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 241/468 (51%), Gaps = 71/468 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + E + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKEYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV++L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLY 579
+ + +E+ L E RRK+ + AA LH E+ Y
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAY 557
>gi|30264620|ref|NP_846997.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Ames]
gi|47530091|ref|YP_021440.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187442|ref|YP_030694.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Sterne]
gi|65321918|ref|ZP_00394877.1| COG1193: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|165871464|ref|ZP_02216111.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167635560|ref|ZP_02393872.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|167641563|ref|ZP_02399810.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|170688257|ref|ZP_02879467.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|170708684|ref|ZP_02899122.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|177653140|ref|ZP_02935427.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190566985|ref|ZP_03019901.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227817334|ref|YP_002817343.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CDC 684]
gi|229603197|ref|YP_002868830.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A0248]
gi|254686957|ref|ZP_05150815.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CNEVA-9066]
gi|254736658|ref|ZP_05194364.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Western North America USA6153]
gi|254741696|ref|ZP_05199383.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Kruger B]
gi|254754707|ref|ZP_05206742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Vollum]
gi|254757539|ref|ZP_05209566.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Australia 94]
gi|386738447|ref|YP_006211628.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|421639161|ref|ZP_16079754.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
gi|81714920|sp|Q81L40.1|MUTS2_BACAN RecName: Full=MutS2 protein
gi|254766187|sp|C3PAE0.1|MUTS2_BACAA RecName: Full=MutS2 protein
gi|254766188|sp|C3L808.1|MUTS2_BACAC RecName: Full=MutS2 protein
gi|30259278|gb|AAP28483.1| MutS2 family protein [Bacillus anthracis str. Ames]
gi|47505239|gb|AAT33915.1| MutS2 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181369|gb|AAT56745.1| MutS2 family protein [Bacillus anthracis str. Sterne]
gi|164712761|gb|EDR18291.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167510448|gb|EDR85847.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|167528980|gb|EDR91735.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|170126364|gb|EDS95253.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|170667763|gb|EDT18516.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|172081664|gb|EDT66735.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190561976|gb|EDV15945.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227002648|gb|ACP12391.1| MutS2 family protein [Bacillus anthracis str. CDC 684]
gi|229267605|gb|ACQ49242.1| MutS2 family protein [Bacillus anthracis str. A0248]
gi|384388299|gb|AFH85960.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|403393580|gb|EJY90823.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
Length = 786
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 263/519 (50%), Gaps = 59/519 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ TL PT+++L G G SNA I+K +G ++I +A+
Sbjct: 471 DVNTLSPTHKLLIGVPGRSNAFEISKRLGLSNRVIDQAR 509
>gi|218232809|ref|YP_002368190.1| MutS family protein [Bacillus cereus B4264]
gi|229047158|ref|ZP_04192774.1| DNA mismatch repair protein [Bacillus cereus AH676]
gi|296503988|ref|YP_003665688.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|423586119|ref|ZP_17562206.1| MutS2 family protein [Bacillus cereus VD045]
gi|423649351|ref|ZP_17624921.1| MutS2 family protein [Bacillus cereus VD169]
gi|423656349|ref|ZP_17631648.1| MutS2 family protein [Bacillus cereus VD200]
gi|218160766|gb|ACK60758.1| putative MutS family protein [Bacillus cereus B4264]
gi|228724189|gb|EEL75530.1| DNA mismatch repair protein [Bacillus cereus AH676]
gi|296325040|gb|ADH07968.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|401231147|gb|EJR37651.1| MutS2 family protein [Bacillus cereus VD045]
gi|401283680|gb|EJR89564.1| MutS2 family protein [Bacillus cereus VD169]
gi|401291468|gb|EJR97144.1| MutS2 family protein [Bacillus cereus VD200]
Length = 633
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|431757639|ref|ZP_19546268.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3083]
gi|430618144|gb|ELB54991.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E3083]
Length = 642
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 254/510 (49%), Gaps = 56/510 (10%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI-DCKLLIILDRASEDLELIRAERKRNM 146
D Q +PLL K+ L +EE I I D K + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEELIDQKIKDNK---VSDDASRNLRKVRKQLQIIE 161
Query: 147 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T F
Sbjct: 162 KEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTVF 220
Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 221 IEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARAK 280
Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
++ ++G+ P ++ H+ I+ +HP L
Sbjct: 281 LSREINGITPKINKSEHIV------IKQGRHPFL-------------------------- 308
Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +PA
Sbjct: 309 ----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVPA 358
Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
K L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+P
Sbjct: 359 KEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTEP 418
Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 419 NEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLRV 478
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 479 GETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|149183061|ref|ZP_01861514.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
gi|148849242|gb|EDL63439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
Length = 786
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 258/522 (49%), Gaps = 55/522 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+LEE ++ +T A ++++ + L I DI + A G +L P E V T+RA
Sbjct: 39 TLEEVIRIQEETDEAASILRMKGHAPLGGIFDIRPAVKRATIGGMLGPQEFVQVASTIRA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + E L E + LT LE KI +D ILD AS+
Sbjct: 99 SRQFRLFMEDLEEE---EELELPILTEKVSQMAVLTPLEHKIKAVVDENG-AILDSASDS 154
Query: 135 LELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR++ + N E L+ +++ AQ + +IT R R + +K ++
Sbjct: 155 LRQIRSQIRANEGRIREKLERMIRSSNAQKM----LSDAIITIRNDRYVIPVKQEYRGNY 210
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP+ V NN L E E IL+ LT E++ ++
Sbjct: 211 -GGIIHDQSSSGQTLFIEPEVIVSLNNALRELKLKEGQEIEKILTELTVEVSVFSEDLLT 269
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +ID F +A + + + G P ++ + + + +HP+L
Sbjct: 270 IVSVLADIDFMFTKAKYGKSIKGTKPEINGNQVLKLNRA------RHPML---------- 313
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P+ V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 314 ------PIDEAVAN-------------------DIELGKDFSSIVITGPNTGGKTVTLKT 348
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL +LM+++GL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 349 IGLLTLMAQSGLQIPALDGSEMGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGKVD 408
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
ESLVL DE+G+GTDP EG ALA SIL + R V TTHY +L NA+
Sbjct: 409 HESLVLFDELGAGTDPQEGAALAISILDEVHQRGAKVVATTHYPELKAYGYNRDGVVNAS 468
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
EF +ETL PTY++L G G SNA I+K +G ++I RA+
Sbjct: 469 VEFDVETLSPTYKLLIGVPGRSNAFEISKRLGLADRVIDRAK 510
>gi|393199976|ref|YP_006461818.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
gi|327439307|dbj|BAK15672.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
Length = 788
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 269/552 (48%), Gaps = 60/552 (10%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + LA+++ + + L I D+ + G +LSP E+ + T+RA + + +
Sbjct: 46 ELLEEMDEGLAILRVKGNVPLGGIFDVRPHARRSQIGGMLSPMELMEIASTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +++ ++ +E + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DIESENTIEIPHFIERKEQMPVLTALQHEINDCIDDNG-TVLDSASPALRSIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + + L+SL + A + I IT R R + +K ++ GI
Sbjct: 162 SLRSEESKVRQKLESLTRGANATKMLSDAI----ITIRNDRFVIPVKQEYRSHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SG T F+EP ++ NN RL E AE ILS LT + + EI L+ +
Sbjct: 217 DQSASGQTLFIEPDAVIQSNNEVQRLKVKEKAEIERILSELTLRVQEVGHEIFVLVQLLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D+ A+ + Q P ++ + + + +HPLL
Sbjct: 277 EMDVILAKGKYGQANKCTMPKMNKEGYTRLVRA------RHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P++ V N+ I+ + +VITGPNTGGKT ++KT+GL ++
Sbjct: 315 PIEDAVANT-------------------IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTI 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++ GL +PA + L F+ I ADIGD QS+EQ+LSTFS H+ IVDIL + +SL+L
Sbjct: 356 MAQCGLPVPALDGSELAVFEQIFADIGDEQSIEQSLSTFSSHMVNIVDILSKFNEKSLIL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL DR + T+HY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAIAILDETVDRGARVMATSHYPELKAYGYNRPSVVNASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+K +G +I A+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISKRLGLSSNVIDHAKSFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTA 568
R + E +A A
Sbjct: 531 SRLRSEREADEA 542
>gi|255080414|ref|XP_002503787.1| predicted protein [Micromonas sp. RCC299]
gi|226519054|gb|ACO65045.1| predicted protein [Micromonas sp. RCC299]
Length = 863
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 200/569 (35%), Positives = 293/569 (51%), Gaps = 62/569 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDL-STIEDIAGILNSAVSGQLLSPSEIC 66
+P G + EES LL +T+AA + P D+ +D+ + A G++LS S +
Sbjct: 113 LPLGATPEESATLLAETTAAATLRDVHGGFPRDVFEGTKDVRPWIAGAARGRVLSGSSLA 172
Query: 67 AVRRTLRAVNNVWKKLTEAAELDGDSLQRYS-PLLELLKNCNFLTELEEKIGFCIDCKLL 125
V T A V + + + L+R + PL+ + + LE +I C+
Sbjct: 173 DVATTAAACAKVHALIHAPNDEALEPLRRLAAPLVGVPET------LEREIRRCVMIPGG 226
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
+LD AS+ L IRAER+ L +LL++ A + + ++ I R R C+ IKA
Sbjct: 227 NVLDDASDTLAAIRAERRETERELRALLQQKAQHMQKKNFAERAQIVIRLGRECIPIKAG 286
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+ + DG+ L+ SS+G T F EP AV NN + L+ E AE +LS LTA + +
Sbjct: 287 AQSEM-DGVVLDSSSTGQTVFKEPAEAVPLNNRILELATEEDAEVERVLSALTAMVVGDD 345
Query: 246 REIKYL--MDRVLEIDLAFARAGFAQWMDGVCP----ILSSQSHVSFDSSINIEGIKHPL 299
L + + +DLA ARA A W+ G P ++SS+S V +S++ + G++HPL
Sbjct: 346 GGASILNATEAMAALDLASARASHAMWL-GARPAELVVVSSESGVCLESAVRLPGMQHPL 404
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVG------------SLSKGISDFPVPIDIK- 346
LL L L P V E G + + F D +
Sbjct: 405 LLERHLPKL--------PRGGKVGEEETVRGFDEREEDGEEEEEEEEEGARFQSRADARE 456
Query: 347 --------VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA--KNHP-RLPWF 395
V T +V ITGPNTGGKTAS+K LGLA LM++AGL++PA P R+PW
Sbjct: 457 AVVPVDFVVPPSTSLVAITGPNTGGKTASLKALGLALLMARAGLHIPAGGDGEPSRVPWT 516
Query: 396 DLILADIGDHQS--LEQNLSTFSGHISRIVDILELV-------SRESLVLIDEIGSGTDP 446
+LAD+GD QS L+ LSTFS H+ R+ IL +R +VL+DE G GTDP
Sbjct: 517 RRVLADLGDAQSLDLDGGLSTFSAHLVRLRRILRACEDETCDGTRSVVVLLDEPGGGTDP 576
Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT--RFENAATEFSLETLRPTYRI 504
+EG ALA ++L+ + R L V T+HY ++ L + + NAA EF ETLRPTYR+
Sbjct: 577 AEGAALAAAVLRAAQTRSLLTVATSHYEEVKALAESGSCPGAANAAVEFDAETLRPTYRL 636
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
LWG G SNA++IA +G ++++ A+K
Sbjct: 637 LWGEFGQSNAISIAAGLGLAPELVEAAEK 665
>gi|423384970|ref|ZP_17362226.1| MutS2 family protein [Bacillus cereus BAG1X1-2]
gi|401638925|gb|EJS56667.1| MutS2 family protein [Bacillus cereus BAG1X1-2]
Length = 633
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I + + AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|228934770|ref|ZP_04097601.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824670|gb|EEM70471.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 633
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ VS+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEVSAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|431752768|ref|ZP_19541448.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2620]
gi|430613227|gb|ELB50244.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2620]
Length = 642
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KLSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|423367459|ref|ZP_17344891.1| MutS2 family protein [Bacillus cereus VD142]
gi|401084009|gb|EJP92259.1| MutS2 family protein [Bacillus cereus VD142]
Length = 633
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 294/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNG--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + FD + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ + +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYMGNKEYAIEKVNESKIRKPKI 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|392988863|ref|YP_006487456.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
gi|392336283|gb|AFM70565.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
Length = 786
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQTVREQLDGIVRGKNAKY-----LSDTIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK VE NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFVEPKQIVELNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ EI + + ++DL A+A F + + + P +S ++HV + +HPL
Sbjct: 257 ELVPHRHEIIHNAYVIGKLDLMNAKARFGKELKAIVPAISVENHVILKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + E + +VITGP
Sbjct: 311 I-----------------------DQEKVVAN------------DISIGKEYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM ++GL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQSGLPIPVDEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILAHVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D+ +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDQSVINEAKQLM 511
>gi|188590038|ref|YP_001921612.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum E3 str. Alaska E43]
gi|238689679|sp|B2V583.1|MUTS2_CLOBA RecName: Full=MutS2 protein
gi|188500319|gb|ACD53455.1| MutS2 family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 785
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 267/532 (50%), Gaps = 60/532 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P+ + E + +L A +M+ + + DI IL A G L+P ++ V
Sbjct: 35 VPYDNTYEINNRLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94
Query: 71 TL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
L R + +K+ E E+ S + L +L N L + E+ D +
Sbjct: 95 MLTATRRMQEFFKR--EDQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----V 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
D AS L IR R+++ +S +++ I ++ + L T R R + +KA
Sbjct: 146 SDNASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAE 201
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+K +P G+ + SS+GAT F+EP G V NN L E AE +LS L+ ++ +
Sbjct: 202 YKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNA 260
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + +D F++ +A ++ + P+ V D NI +HPL+
Sbjct: 261 EHCESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE---- 310
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
D VP+D+ + E ++ITGPNTGGKT
Sbjct: 311 -------------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKT 339
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+EQ+LSTFS H++ IV+I
Sbjct: 340 VTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNI 399
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+E +R+SL+L DE+G GTDP+EG ALA +I++ L + + TTHY++L R
Sbjct: 400 MEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKER 459
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ENA+ EF + TLRPTYR+L G G SNA I+K IG +++I A+ + +
Sbjct: 460 VENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSK 511
>gi|404371451|ref|ZP_10976755.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
gi|226912421|gb|EEH97622.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
Length = 785
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 217/408 (53%), Gaps = 48/408 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D+AS L IR RN++ +S ++ I +A + L T R R + +KA
Sbjct: 145 ISDKASSTLNGIR----RNLKEKNSSVRDKINSIVRANAKYLQDTLYTMRGDRYVLPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL L+ + ++
Sbjct: 201 EYKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELKLKEKAEIERILMDLSNRVYEN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
++ + E+D FA+ +A ++ +CP V+ D S +I +HPL+
Sbjct: 260 IETVESNYKILTELDFIFAKGKYASSLNAICP------EVNEDRSFDIIQGRHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+P VP DI + E ++ITGPNTGGK
Sbjct: 310 -----------DP--------------------KVVVPSDIYLGKEFNTLMITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL LM +GL +PAK+ + +F I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTVGLLHLMGLSGLLIPAKDASSISFFTKIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I++ SLVL DE+GSGTDP EG ALA +I+ LR++ + TTHY++L +
Sbjct: 399 IMKEADDSSLVLFDELGSGTDPVEGAALAIAIIDTLREQEARLIATTHYSELKGYALRTA 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I +A+
Sbjct: 459 GIENASVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLQDDVINKAK 506
>gi|227551015|ref|ZP_03981064.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
gi|257896641|ref|ZP_05676294.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
gi|293379657|ref|ZP_06625793.1| MutS domain V protein [Enterococcus faecium PC4.1]
gi|424765594|ref|ZP_18192987.1| MutS domain V protein [Enterococcus faecium TX1337RF]
gi|430847593|ref|ZP_19465429.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1133]
gi|227179850|gb|EEI60822.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
gi|257833206|gb|EEV59627.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
gi|292641655|gb|EFF59829.1| MutS domain V protein [Enterococcus faecium PC4.1]
gi|402416715|gb|EJV49030.1| MutS domain V protein [Enterococcus faecium TX1337RF]
gi|430536911|gb|ELA77271.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1133]
Length = 642
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KLSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|403046921|ref|ZP_10902390.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
gi|402763617|gb|EJX17710.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
Length = 782
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 260/496 (52%), Gaps = 48/496 (9%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +L+ SE+ ++R ++ + N +K + L+ + Y L
Sbjct: 65 LSGLAKISSFIHRATIGGVLNVSELNVIKRLIQ-IQNQYKTFYNSL-LNEEEEINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ ++ L+ L + I C + D AS +L+ IR++ + + + L K+
Sbjct: 123 DRMEQLPVLSNLYQNI--HQKCDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQ 180
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +KA ++ +GI + S+SG T ++EP VE +N
Sbjct: 181 GNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQIS 239
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILS 279
N E E IL+ LT ++A+ E + + + ++ +ID A+A +A+ + G P +
Sbjct: 240 SFRNDEAVERERILTELTVQVAE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFT 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ D ++ + HPLL +S+ +N+ D+E
Sbjct: 299 T------DRTVYLPKAFHPLLDRTSV------VANTIEFAQDIE---------------- 330
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
V+ITGPNTGGKT ++KTLGL M+++G+ +P + +L F+ +
Sbjct: 331 -------------TVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVY 377
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL +
Sbjct: 378 CDIGDEQSIEQSLSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDH 437
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + L + TTHY +L NA+ EF + TL PTY++L G G SNA +I+K
Sbjct: 438 VHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISK 497
Query: 520 SIGFDRKIIQRAQKLV 535
+G + ++IQ+A+ ++
Sbjct: 498 KLGLNMQVIQKAKSMI 513
>gi|414084186|ref|YP_006992894.1| mutS domain V family protein [Carnobacterium maltaromaticum LMA28]
gi|412997770|emb|CCO11579.1| mutS domain V family protein [Carnobacterium maltaromaticum LMA28]
Length = 634
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 258/517 (49%), Gaps = 61/517 (11%)
Query: 25 NQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
N+T A A++ ++ + + I + G LL S + V LR+ + ++
Sbjct: 48 NETEEARALLDAKLTMPFMGLSSIDVFMEQLEKGLLLEASSLIDVADFLRS-GRMIRRFM 106
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---A 140
E E +L Y+ ++ + TE+E++I F I + D AS++L IR A
Sbjct: 107 EKYESLAPTLTMYA------RSISEFTEIEDEIYFSIKNGQ--VADEASKELRRIRRLIA 158
Query: 141 ERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
E++ +E L LK Q I + ++K+ R + IKA++K + G + S
Sbjct: 159 EKESKIEERLSKFLKNKDNQ----KQIQEFFVSKKNERFTIPIKAAYKNQVA-GTIIETS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
S G T F+EP + N+ L E E IL+ L+ I ++ I+ ++ + E D
Sbjct: 214 SKGTTVFIEPTAVTKLNDELAILKVEESTEIYQILATLSGLILENLVPIQLNLETIAEYD 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
+ FAR +++ + GV P L+ + ++ +++ HPL+ ++
Sbjct: 274 MIFARGKYSRLIQGVTPKLNQRGYIHLVNAV------HPLIEANA--------------- 312
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VP++ V + R ++ITGPN GGKT +KT+GL +LM+
Sbjct: 313 ---------------------VPLNFTVGEDYRGLIITGPNAGGKTVVLKTVGLLALMTL 351
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
G+ LPA + F+ I DIGD QSLE LSTFS HI I DI+++ R SLVL DE
Sbjct: 352 LGIQLPADEGTEMGLFEGIFVDIGDSQSLENALSTFSSHIQNIADIMQVAPRNSLVLFDE 411
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
IGSGT+P+EG ALA +IL+ R + V TTHY ++ + F NAA F TL
Sbjct: 412 IGSGTEPNEGAALAIAILEEFYQRGNIVVATTHYGEIKRYSEIHPDFINAAMAFDQATLT 471
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
P Y++L G +G+SNAL IAK + +IQ+AQ+ +E
Sbjct: 472 PLYQLLMGESGESNALWIAKKMNLKEHVIQQAQRYME 508
>gi|251781073|ref|ZP_04823993.1| DNA mismatch repair protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243085388|gb|EES51278.1| DNA mismatch repair protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 635
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 290/585 (49%), Gaps = 76/585 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
+G ++ K IP +L++ ++LN+TS ++ S + L I DI +LN G +
Sbjct: 26 LGKNLIDKL-IP-STNLKQVNRMLNETSEGRRLIDASYHMPLEGIFDINSLLNKMEKGAV 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L PSE+ + LR V K + E +L Y +N L +EE+I
Sbjct: 84 LEPSELITIGDFLRGCRKV-KLFIKDKEGYAPTLSSYG------ENITELQYIEEEI--S 134
Query: 120 IDCKLLIILDRASEDLELIR-----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
I K +I A+++L+ IR E K N E L+ +K + + + + + +++R
Sbjct: 135 ISIKGTVIDSNATKELKKIRKHIDLCEGKIN-EKLEKFIKSPSNREY----LQEAFVSQR 189
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R V IKAS+K + I + VSS G T FME ++ L E EE IL
Sbjct: 190 NGRYTVPIKASYKNQVSGSI-VEVSSKGNTVFMELNIISKYTVELASLRGEESIEEYKIL 248
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ LT I +E+K ++ + E D+ A+A +++ + GV P L++ INI
Sbjct: 249 ATLTEMIFSRIKELKVNVEVISEYDMILAKAKYSKDIKGVKPKLNNYGF------INIVD 302
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
++PL+ S +P+++K+ + R +
Sbjct: 303 GRYPLIKNS-------------------------------------IPLNLKIGEKYRSL 325
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPN GGKT +KT+G+ ++ ++G ++ A + + FD I DIGD QS+E +LST
Sbjct: 326 IITGPNAGGKTVVLKTVGILTMAIQSGFHISASENSEMAVFDNIFVDIGDDQSIENSLST 385
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+S + IL ++ +L+L DEIGSGT+P+EG ALA +IL+ + + V +THY
Sbjct: 386 FSSHVSNLSRILRESTKNTLLLFDEIGSGTEPNEGAALAIAILEEFYKKGCITVASTHYG 445
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
++ FENAA EF +TL P YR+ G +G+SNAL IAK +G D II R+++
Sbjct: 446 EIKNFSYNHPHFENAAMEFKKDTLEPMYRLNIGKSGESNALYIAKKMGIDDVIIDRSKRY 505
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+ E +++ R+ L+++ S + I++ Y
Sbjct: 506 F----------KSKEYNYEIIDSRKLLKNKTENENSGYENIINEY 540
>gi|313114167|ref|ZP_07799719.1| putative recombination and DNA strand exchange inhibitor protein
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623576|gb|EFQ06979.1| putative recombination and DNA strand exchange inhibitor protein
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 803
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 252/495 (50%), Gaps = 60/495 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
+E+++ + AV G +LS E+ V LR N+ W +E D+L P +
Sbjct: 68 VENVSQLAARAVKGGVLSMGELLMVAGALRNFQNLSSWYGASEH-----DAL----PTDD 118
Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L LE++I I D + D AS L +R + + ++ L+ +
Sbjct: 119 LFYALAPQPGLEQQISSAILAPDA----MADTASHTLNDLRKKIRATENSIRDRLESMVR 174
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + +++ R R V +K+ ++ + GI +VSS+GAT F+EP+ VE N
Sbjct: 175 NMDTSKYLQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVEANAR 233
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
++ E E IL TA++A E + +Y +LEID+ A+A A + P
Sbjct: 234 ILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDVLLAKARLALDLKAFKPA- 292
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V D S ++ +HPL+ +P K
Sbjct: 293 -----VRTDDSFSLIRARHPLI---------------DPKKC------------------ 314
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VP+DI + + ++ITGPNTGGKT ++KT GL M++ G +PA + FD
Sbjct: 315 --VPVDIALGRDYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICVFDEF 372
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+DE+G+GTDP+EG ALA +I++
Sbjct: 373 LVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAVAIIE 432
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
LR R L + TTHYA+L + NA+ EF LETLRPTY++ G G SNA I+
Sbjct: 433 ELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNAFLIS 492
Query: 519 KSIGFDRKIIQRAQK 533
+ +G ++I+ AQ+
Sbjct: 493 EKLGIPERVIEAAQQ 507
>gi|377809473|ref|YP_005004694.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
gi|361056214|gb|AEV95018.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
Length = 786
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 263/488 (53%), Gaps = 54/488 (11%)
Query: 51 LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT 110
+++ ++GQ LS +I V RT R V + + L +LD L + S EL+ +
Sbjct: 80 IDAVLNGQELS--QIGNVLRTTRNVTDFFSDLENDDQLDMRILDQTSQ--ELVT----VP 131
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
++E+++ ++ + + AS DL +R+ R + ++K+ + A + +P+
Sbjct: 132 DVEQRLSRSLEGNGHLT-NAASPDLAYLRSTITRIENEIRQKMEKLT-RGNNAKYLSEPI 189
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
+T R R + +K ++ L G+ + S+SG T ++EP+ VE NN + + + EE
Sbjct: 190 VTIRNERFVLPVKTEYRSKLG-GVVHDQSASGQTLYIEPEAVVELNNDLRQNQVAVVHEE 248
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
I L+ E+ R+ D +L DL A+A +A I +++ +S D+
Sbjct: 249 QRIFQELS-ELVAPHRDTLKQNDHILGHFDLLNAKARYA------AKIKATEPKISEDNQ 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
IN+ +HPL+ + + VG+ DI++
Sbjct: 302 INLRKARHPLI-----------------------DPKRVVGN------------DIRLGK 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + ++ITGPNTGGKT S+KT+GL LM ++G+++PA + + FD I ADIGD QS+E
Sbjct: 327 DFKTLIITGPNTGGKTISLKTVGLLQLMGQSGIFIPANENSTIGIFDEIFADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFS H+ I+ IL + SLVL DE+G+GTDP EG ALA +IL +R+ L +
Sbjct: 387 QNLSTFSSHMDNIIHILAQIDNNSLVLFDELGAGTDPKEGAALAIAILDDVRNHASLVMA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + + NA+ EF++ETL+PTY++L G G SNA +I+ +G D ++I
Sbjct: 447 TTHYPELKTYGYERSETINASMEFNVETLKPTYKLLIGIPGQSNAFDISSRLGLDNRLIS 506
Query: 530 RAQKLVER 537
+A+ LV++
Sbjct: 507 QARDLVDQ 514
>gi|187935216|ref|YP_001886652.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B str. Eklund 17B]
gi|238691672|sp|B2TS45.1|MUTS2_CLOBB RecName: Full=MutS2 protein
gi|187723369|gb|ACD24590.1| MutS2 family protein [Clostridium botulinum B str. Eklund 17B]
Length = 785
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 267/532 (50%), Gaps = 60/532 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P+ + E + L A +M+ + + DI IL A G L+P ++ V
Sbjct: 35 VPYDNTYEINNSLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94
Query: 71 TL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
L R + +K+ E E+ S + L +L N L + E+ D +
Sbjct: 95 MLTATRRMQEFFKR--EEQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----V 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
D AS L IR R+++ +S +++ I ++ + L T R R + +KA
Sbjct: 146 SDNASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAE 201
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+K +P G+ + SS+GAT F+EP G V NN L E AE +LS L+ ++ +
Sbjct: 202 YKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNA 260
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + + +D F++ +A ++ + P+ V D NI +HPL+
Sbjct: 261 EHCESNLKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE---- 310
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
D VP+D+ + E ++ITGPNTGGKT
Sbjct: 311 -------------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKT 339
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+EQ+LSTFS H++ IV+I
Sbjct: 340 VTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNI 399
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+E +R+SL+L DE+G GTDP+EG ALA +I++ L + + TTHY++L R
Sbjct: 400 MEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKDR 459
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ENA+ EF + TLRPTYR+L G G SNA I+K IG +++I A+ + +
Sbjct: 460 VENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSK 511
>gi|392971758|ref|ZP_10337151.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
gi|392510297|emb|CCI60439.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
Length = 782
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 260/496 (52%), Gaps = 48/496 (9%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +L+ SE+ ++R ++ + N +K + L+ + Y L
Sbjct: 65 LSGLAKISSFIHRATIGGVLNVSELNVIKRLIQ-IQNQYKTFYNSL-LNEEEEINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ ++ L+ L + I C + D AS +L+ IR++ + + + L K+
Sbjct: 123 DRMEQLPVLSNLYQNI--HQKCDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQ 180
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +KA ++ +GI + S+SG T ++EP VE +N
Sbjct: 181 GNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQIS 239
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILS 279
N E E IL+ LT ++A+ E + + + ++ +ID A+A +A+ + G P +
Sbjct: 240 SFRNDEAVERERILTELTVQVAE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFT 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ D ++ + HPLL +S+ +N+ D+E
Sbjct: 299 T------DRTVYLPKAFHPLLDRTSV------VANTIEFAQDIE---------------- 330
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
V+ITGPNTGGKT ++KTLGL M+++G+ +P + +L F+ +
Sbjct: 331 -------------TVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVY 377
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL +
Sbjct: 378 CDIGDEQSIEQSLSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDH 437
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + L + TTHY +L NA+ EF + TL PTY++L G G SNA +I+K
Sbjct: 438 VHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISK 497
Query: 520 SIGFDRKIIQRAQKLV 535
+G + ++IQ+A+ ++
Sbjct: 498 KLGLNMQVIQKAKSMI 513
>gi|228992175|ref|ZP_04152109.1| DNA mismatch repair protein [Bacillus pseudomycoides DSM 12442]
gi|228767538|gb|EEM16167.1| DNA mismatch repair protein [Bacillus pseudomycoides DSM 12442]
Length = 630
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 285/583 (48%), Gaps = 67/583 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +I + G +L P+E+ +V LR V KK
Sbjct: 44 LNETTEARAILDAEGHVPFFGISNIDSTIQKLEKGMILDPTELVSVSDFLRGCRKV-KKF 102
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 103 MLDKEFFAPVLASYANSMSEFKS------VEEEINFSIKGNS--IDSAASKELKRIR--- 151
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N+++++ +K+ ++ + I + I+K+ R + +KAS+K + G + V
Sbjct: 152 -NNIDSVEGKIKERLSKFLNSSANKKYIQEFFISKKDDRYTIPVKASYKNQVA-GTIVEV 209
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
SS G+T F+EP + N L E EE IL+ L+ I + IK M+ + +
Sbjct: 210 SSKGSTVFIEPNTVTKLNVELASLKAEEAMEEYQILATLSGMILEDIYNIKINMELISQY 269
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ + G+ P L+ +V + KHPLL G
Sbjct: 270 DMVFAKAKFSKHIGGIEPKLNDYGYVK------LVHCKHPLLAGEV-------------- 309
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP+ ++ R ++ITGPN GGKT +KT+GL +L +
Sbjct: 310 ----------------------VPLHFEIGPNYRSLIITGPNAGGKTIVLKTIGLLTLAT 347
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + F+ I DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 348 MSGLHIAGDKETEIAVFENIFVDIGDNQSIENALSTFSSHMKNLSEIMRVSNNNTLLLFD 407
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ V TTHY ++ + + F NAA +F+ ETL
Sbjct: 408 EIGSGTEPNEGAALAISILEEFYHMGCTTVATTHYGEIKRFSEMHSDFMNAAMQFNSETL 467
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE--RLRPERQQH---RKSELYQS 553
P Y+++ G +G+SNAL I++ + ++QRA+ +E R ER RK ++ +
Sbjct: 468 EPMYKLMIGKSGESNALWISRKMNVRENVLQRAKGYMENKEYRLERVNESRLRKPKIVKE 527
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREDSTSASISV-YRYQF 595
EE+ + + R + + +Y+E +I V Y QF
Sbjct: 528 KAEEKDEYKKGDRVKLLDYDDFGIVYKEKDNFFNIVVFYNAQF 570
>gi|399888238|ref|ZP_10774115.1| recombination and DNA strand exchange inhibitor protein
[Clostridium arbusti SL206]
Length = 788
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 239/447 (53%), Gaps = 53/447 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I DRAS +L IR + ++ S + + + + + + T R R + +KA +
Sbjct: 145 ISDRASTELFNIRKSLRDKTASVKSKVNSLVRSY--SNFLQENIYTIRGDRYVIPVKAEY 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P G+ + SSSGAT F+EP G V NN + E AE IL L+ +I ++
Sbjct: 203 KAQVP-GLVHDQSSSGATLFIEPMGLVNLNNEIKEIMLKEKAEINRILQELSQKIYENIV 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
++ V E+D FA+A +A ++ + P V+ + I+I +HPL+
Sbjct: 262 VVENNASIVYELDFIFAKAKYASEINAIRP------GVNDNGIIDIVQGRHPLI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K V +D+ + E +++TGPNTGGKT
Sbjct: 310 ---------DPEKV--------------------VAMDVYLGREFTSLIVTGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL LM+ +G+ +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV+I+
Sbjct: 341 TLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIM 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
SLVL DE+G+GTDP+EG ALA SIL+ LR+R V TTHY++L K
Sbjct: 401 GKADLTSLVLFDELGAGTDPTEGAALAVSILENLRERKTKLVATTHYSELKAYALKTEGV 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A+K + + L+ E
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDEARKGISSDTLKFE--- 517
Query: 545 HRKSELYQSLMEERRKLESQARTAASL 571
+L QSL E+ K E AR + L
Sbjct: 518 ----DLIQSLQEKSIKAEENARKSEML 540
>gi|229087099|ref|ZP_04219249.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
gi|228696167|gb|EEL49002.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
Length = 786
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 272/557 (48%), Gaps = 84/557 (15%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q+ ++ + + + PL I DI + A G +LSP E+ + T+ +
Sbjct: 45 EMQETTDEAAKVIRLKGHVPL--GGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI + LD AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETYVAQIVSLYDLEKKITSCIGDGGEV-LDSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
I + S+SG T F+EP+ VE NN E R+ + E IL +LT E+A +
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLAN 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ + +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 270 VEVIANLDFIFAKALYAKRIKATKPIVNNERYMDLRQA------RHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+P VP DI + + +VITGPNTGGKT ++KT+
Sbjct: 313 ----DP--------------------KIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTV 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 349 GICVLMAQSGLHIPVLDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+
Sbjct: 409 ESLVLFDELGAGTDPQEGAALAISILDEVYNRGARVVATTHYPELKAYGYNREQVINASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-------------------- 531
EF + TL PTY++L G G SNA I+K +G ++I RA
Sbjct: 469 EFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEE 528
Query: 532 -QKLVERLRPERQQHRK 547
QK ER E ++HRK
Sbjct: 529 SQKNAEREWNEAEEHRK 545
>gi|406665755|ref|ZP_11073526.1| MutS2 protein [Bacillus isronensis B3W22]
gi|405386274|gb|EKB45702.1| MutS2 protein [Bacillus isronensis B3W22]
Length = 788
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 270/552 (48%), Gaps = 60/552 (10%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + LA+++ + + + I D+ + G +LSP E+ + T+RA + + +
Sbjct: 46 ELLEEMDEGLAILRVKGNVPMGGIFDVRPHARRSQIGGMLSPMELMEIASTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +++ ++ +E + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DIESENTIEIPHFIERKEQMPVLTALQHEINDCIDDNG-TVLDSASPALRSIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + + L+SL + A + I IT R R + +K ++ GI
Sbjct: 162 SLRSEESKVRQKLESLTRGSNATKMLSDAI----ITIRNDRFVIPVKQEYRSHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SG T F+EP ++ NN RL E AE ILS LT ++ + EI L+ +
Sbjct: 217 DQSASGQTLFIEPDAVIQSNNEVQRLKVKEKAEIERILSELTLKVQEVGHEIFVLVQLLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D+ A+ + Q P ++ + + + +HPLL
Sbjct: 277 EMDVILAKGKYGQANKCTMPKMNKEGYTRLVRA------RHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P++ V N+ I+ + +VITGPNTGGKT ++KT+GL ++
Sbjct: 315 PIEDAVANT-------------------IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTI 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++ GL +PA + L F+ I ADIGD QS+EQ+LSTFS H+ IVDIL + +SL+L
Sbjct: 356 MAQCGLPVPALDGSELAVFEQIFADIGDEQSIEQSLSTFSSHMVNIVDILSKFNEKSLIL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL DR + T+HY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAIAILDETVDRGARVMATSHYPELKAYGYNRPSVVNASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+K +G +I A+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISKRLGLSSNVIDHAKSFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTA 568
R + E +A A
Sbjct: 531 SRLRSEREADEA 542
>gi|229005742|ref|ZP_04163441.1| DNA mismatch repair protein [Bacillus mycoides Rock1-4]
gi|228755527|gb|EEM04873.1| DNA mismatch repair protein [Bacillus mycoides Rock1-4]
Length = 630
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 285/583 (48%), Gaps = 67/583 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +I + G +L P+E+ +V LR V KK
Sbjct: 44 LNETTEARAILDAEGHVPFFGISNIDSTIQKLEKGMILDPTELVSVSDFLRGCRKV-KKF 102
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 103 MLDKEFFAPVLASYANSMSEFKS------VEEEINFSIKGNS--IDSAASKELKRIR--- 151
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N+++++ +K+ ++ + I + I+K+ R + +KAS+K + G + V
Sbjct: 152 -NNIDSVEGKIKERLSKFLNSSANKKYIQEFFISKKDDRYTIPVKASYKNQVA-GTIVEV 209
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
SS G+T F+EP + N L E EE IL+ L+ I + IK M+ + +
Sbjct: 210 SSKGSTVFIEPNTVTKLNVELASLKAEEAMEEYQILATLSGMILEDIYNIKINMELISQY 269
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ + G+ P L+ +V + KHPLL G
Sbjct: 270 DMVFAKAKFSKHIGGIEPKLNDYGYVK------LVHCKHPLLAGEV-------------- 309
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP+ ++ R ++ITGPN GGKT +KT+GL +L +
Sbjct: 310 ----------------------VPLHFEIGPNYRSLIITGPNAGGKTIVLKTIGLLTLAT 347
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + F+ I DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 348 MSGLHIAGDKETEIAVFENIFVDIGDNQSIENALSTFSSHMKNLSEIMRVSNNNTLLLFD 407
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ V TTHY ++ + + F NAA +F+ ETL
Sbjct: 408 EIGSGTEPNEGAALAISILEEFYHMGCTTVATTHYGEIKRFSEMHSDFMNAAMQFNSETL 467
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE--RLRPERQQH---RKSELYQS 553
P Y+++ G +G+SNAL I++ + ++QRA+ +E R ER RK ++ +
Sbjct: 468 EPMYKLMIGKSGESNALWISRKMNVRENVLQRAKGYMENKEYRLERVNESRLRKPKIVKE 527
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREDSTSASISV-YRYQF 595
EE+ + + R + + +Y+E +I V Y QF
Sbjct: 528 KAEEKDEYKKGDRVKLLDYDDFGIVYKEKDNFFNIVVFYNAQF 570
>gi|392988507|ref|YP_006487100.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
gi|392335927|gb|AFM70209.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
Length = 632
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 262/513 (51%), Gaps = 55/513 (10%)
Query: 26 QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T A +++SQ + + I + + G LL+P+E+ LR+ + + ++ E
Sbjct: 48 ETKEARQILESQQHVPFMGLTRIDALTSQVKKGFLLTPTELIEYADFLRS-SRMIRRFFE 106
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+ L YS KN L+ +EE I I + + D AS +L +R + +
Sbjct: 107 KNQYQTPLLHVYS------KNMPDLSMVEELIYQQIKNQK--VSDEASRNLRKVRKQLQL 158
Query: 145 NMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
+ + L K I + +I ++ + IKAS+K +P G + S+ G T
Sbjct: 159 TEKEIQDRLLKFLRHPHNKEMIQEAMIVQKGDHYTIPIKASYKNKVP-GTIIEQSNKGTT 217
Query: 205 YFMEPKGAVEFNNMEVRLSNSE-IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
F+EP AVE +M +L +E IAEE +L+ LT +A+ E+ I +++ + +D+ FA
Sbjct: 218 VFIEP-TAVEKASMNYQLLKAEEIAEEYQVLAYLTGALAEQEQAIDLIIETITRLDIIFA 276
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
R +++ + GV P ++ + I I+ +HPL+ G +
Sbjct: 277 RGKYSREIHGVTPRINQSEY------IKIKQGRHPLIQGKA------------------- 311
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VP+D ++ + R +VITG N GGKT +KT+GL +LM+ GL
Sbjct: 312 -----------------VPLDFELGKDYRGLVITGANAGGKTVVLKTVGLLTLMAMFGLQ 354
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA L FD I DIGD Q++E LSTFSGH+ I ++L VSR +LVL+DEIGSG
Sbjct: 355 VPAAEGTELAVFDEIFVDIGDQQTIENALSTFSGHMQNIAEMLRKVSRNTLVLLDEIGSG 414
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
T+P+EG ALA +I++ + ++ L V TTHY ++ + F AA F E L+P Y
Sbjct: 415 TEPNEGAALAVAIMEAMYEQGALIVATTHYGEIKKFANDHEDFIPAAMAFDKEALKPKYL 474
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
+ G TG+S AL IA+ + + +I++AQ ++
Sbjct: 475 LQVGETGESQALWIAQKMNMSQTLIEQAQYYIQ 507
>gi|221632685|ref|YP_002521906.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
gi|254766609|sp|B9KYW4.1|MUTS2_THERP RecName: Full=MutS2 protein
gi|221157216|gb|ACM06343.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
Length = 792
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 263/519 (50%), Gaps = 49/519 (9%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL T A ++ +P + DI ++ +A G +L+P+++ V TL A ++ ++
Sbjct: 46 LLRVTREAARLLNERPSFTIGGFRDIRSVVQAAQRGNILAPADVRTVLDTLEAAASLRRQ 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
D +RY L E + L L + I + + LD AS +L IR
Sbjct: 106 FMA----DERWSERYPALAEFVLAMVDLPGLRADLARSIGPRGEV-LDTASPELAAIRRS 160
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
K E L L+++ A+ +A I +T R R + ++A + +P GI +VS S
Sbjct: 161 LKEAHERLLERLRRLLAERQEA--IQDAYVTIRDGRYVIPVRADRRQAVP-GITHDVSGS 217
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G T F+EP +E NN L +E E IL +LT IA + E+ +++ +DLA
Sbjct: 218 GQTLFVEPFEVLELNNRWRELQAAETREIERILRVLTQRIADAADELLQIVEAGAALDLA 277
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLSAASSNSN 316
A+A A +D V P L S + + + +HPLL
Sbjct: 278 LAKARLAYDLDAVEPELLEPSGPTVPEGHPFLRVRLRAARHPLL---------------- 321
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D + VPID+++ R++VITGPNTGGKT ++KT+GL +L
Sbjct: 322 ----DRRTA---------------VPIDVELGERFRILVITGPNTGGKTVALKTVGLLAL 362
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA L F I DIGD QS+EQNLSTFS H+ RIV L+ SLVL
Sbjct: 363 MAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRRIVATLQQADASSLVL 422
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DEI +GTDP EG ALA +IL+ L + L +VTTHY +L ENA+ EF
Sbjct: 423 LDEIAAGTDPQEGAALARAILERLLEIGALGIVTTHYPELKVFATGTPGLENASVEFDPV 482
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL PTYR+L G G S+AL +A+ +G +I RA++L+
Sbjct: 483 TLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELL 521
>gi|403387033|ref|ZP_10929090.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sp. JC122]
Length = 788
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 289/563 (51%), Gaps = 68/563 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E ++ L +T A ++ ++ P + I D+ +N A L+ ++ + L
Sbjct: 39 NLYEVKEHLEETKEAFKLLTTKGNPPFE--GIYDVREAINKAKKESSLTCEQLLRIASML 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
+ + + ++ E +G Y L ++ + +LE++I I + + DRAS
Sbjct: 97 KCSRSFKEYISHKEEEEG-----YRVLEDICIGIVPIKKLEDEIFMAIVSEEEV-SDRAS 150
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
+DL IR R ++ S +K+ + +A + + L T R R + ++A +K +
Sbjct: 151 DDLYNIR----RKLKQKSSSVKEKVNSLLRANSKYLQENLYTIRGDRYVLPVRAEYKDQV 206
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ + S++GAT F+EP V NN L E E IL LL+ ++ + I+
Sbjct: 207 P-GLIHDQSATGATLFIEPMSLVNLNNEIRELFIKEKKEVERILRLLSKKVTNNIELIEN 265
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ + E+D FA+A +A ++G+CP ++ + + IE ++HPL+ +
Sbjct: 266 DANILWELDFIFAKAKYASEINGICPEINDKGIIDL-----IE-VRHPLIDAKVV----- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VP + + E +VITGPNTGGKT ++KT
Sbjct: 315 ------------------------------VPNSVYLGREFTSLVITGPNTGGKTVTIKT 344
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL LM+ +G+ +PA+++ + +F + ADIGD QS+EQ+LSTFS H++ IV I+E
Sbjct: 345 VGLVHLMAMSGILIPARSNSVVSFFKNVYADIGDEQSIEQSLSTFSSHMTNIVGIIEEAD 404
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SL L DE+GSGTDP+EG ALA SIL+ L+ R V TTHY++L K EN +
Sbjct: 405 ENSLCLFDELGSGTDPTEGAALAVSILENLKKRGCRVVATTHYSELKGYALKTLGVENGS 464
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKS 548
EF++ETL PTY++L G G SNA I++ +G II+ A++ + + L E
Sbjct: 465 VEFNVETLSPTYKLLIGVPGKSNAFEISRRLGLPEYIIKDAKENISTDSLNFE------- 517
Query: 549 ELYQSLMEERRKLESQARTAASL 571
EL QSL + K E+ AR A +L
Sbjct: 518 ELIQSLQAKSIKAENDARMAEAL 540
>gi|325264641|ref|ZP_08131371.1| MutS2 protein [Clostridium sp. D5]
gi|324030303|gb|EGB91588.1| MutS2 protein [Clostridium sp. D5]
Length = 791
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 201/370 (54%), Gaps = 43/370 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+A+ A EI + ++D FAR A M+ P+L+ +
Sbjct: 245 EIQVILARLSADTALYIEEIHNNYKLLTDLDFIFARGSLALSMNASRPVLNQEGR----- 299
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I I +HPLL +P K VPI + +
Sbjct: 300 -IRIREGRHPLL---------------DPRKV--------------------VPISVTLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 EDFTLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAGDRSELAIFRQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQEVDENSLVLFDELGAGTDPTEGAALAIAILSYLHKRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLLGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRA-QKLVER 537
+ A Q L E+
Sbjct: 504 EDAKQHLTEQ 513
>gi|315641294|ref|ZP_07896371.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
gi|315483061|gb|EFU73580.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
Length = 797
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 259/499 (51%), Gaps = 62/499 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+E+IA L G L+ E+ + R L + N V +E EL+ D + L + +
Sbjct: 78 LENIAPHLKRIEIGADLNGLEVAQIARVLSSTNQVSAFFSELQELEID----FHRLYDWV 133
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQ 159
+ L EL +++ +D + D AS +L+ IR +R +N LD L++ A+
Sbjct: 134 EQLVVLPELTKQMTRAVDEDGRVT-DEASPELKGIRQAIRRMEQNIREALDQLVRGSHAK 192
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ L+T R R + +K ++ + G+ + S+SG T F+EPK VE NN
Sbjct: 193 Y-----LSDALVTMRNDRYVLPVKQEYRGIF-GGVVHDQSASGQTLFIEPKQIVELNN-- 244
Query: 220 VRLSNSEIAEETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
RL +IAE+ ILS L+A + REI + + + D+ A+A + + M + P
Sbjct: 245 -RLRQQQIAEKNEVARILSELSALLVPHRREIAHNSYVLGQFDVMNAKARYGKLMKAIVP 303
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+S D + + +HPL+ + E+ V +
Sbjct: 304 TMS------IDREVQLLKARHPLI-----------------------DQEVVVAN----- 329
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
DI + + + +VITGPNTGGKT ++KTLGL LM++AGL +P + ++ F
Sbjct: 330 -------DIMIGKDYQAIVITGPNTGGKTITLKTLGLLQLMAQAGLPIPVEEGSQIGVFA 382
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ IV IL+ + +SLVL DE+G+GTDP EG ALA +I
Sbjct: 383 EIFADIGDEQSIEQNLSTFSSHMTNIVSILDKIDEKSLVLFDELGAGTDPQEGAALAIAI 442
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + + + TTHY +L + NA+ EF ++TL PTYR+L G G SNA
Sbjct: 443 LDAVGAKSSYVMATTHYPELKIYGYNRAKTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 502
Query: 517 IAKSIGFDRKIIQRAQKLV 535
I+K +G D II+ A++++
Sbjct: 503 ISKRLGLDTTIIEEAKQIM 521
>gi|229158157|ref|ZP_04286225.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
gi|228625319|gb|EEK82078.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
Length = 786
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 279/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|227552101|ref|ZP_03982150.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|424762404|ref|ZP_18189913.1| MutS2 family protein [Enterococcus faecalis TX1337RF]
gi|431033419|ref|ZP_19491265.1| MutS2 protein [Enterococcus faecium E1590]
gi|227178767|gb|EEI59739.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|402424629|gb|EJV56797.1| MutS2 family protein [Enterococcus faecium TX1337RF]
gi|430564520|gb|ELB03704.1| MutS2 protein [Enterococcus faecium E1590]
Length = 786
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|317121678|ref|YP_004101681.1| MutS2 family protein [Thermaerobacter marianensis DSM 12885]
gi|315591658|gb|ADU50954.1| MutS2 family protein [Thermaerobacter marianensis DSM 12885]
Length = 885
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 252/532 (47%), Gaps = 72/532 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
+ L+ + DI L A G +LSP E+ AV T R + L L R
Sbjct: 63 IPLAGLADIRRPLQRAAKGGILSPEELLAVAGTARGARRLRAFL----------LNREHA 112
Query: 99 LLELLKNCNFLTE---LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLL 153
L L LEE + I D + + D AS L +R R + +L+ +
Sbjct: 113 YPRLAARAARLVPQPALEEAVAAAIGDDGR---VRDEASPRLASLR----RRLADLEEAI 165
Query: 154 KKVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 209
++ ++ + AG + +PL+T+RR R + +KA + +P G+ + S+SGAT F+EP
Sbjct: 166 RRRLEEMIRSPHWAGALQEPLVTQRRGRFVLPVKAEARAQVP-GVVHDQSASGATLFIEP 224
Query: 210 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
VE N E E IL LT +A + E+ ++ + ++D AR A
Sbjct: 225 MAVVELGNRLREAEAEEQEEVERILGELTRMVAAAGEELAATLEELADLDAIVARGRLAL 284
Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
M P + V + +HPLL
Sbjct: 285 AMRAERPETLDRPRVDLKRA------RHPLL----------------------------- 309
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
G P+ + + +VITGPNTGGKT ++KT+GL +LM +AGL++PA
Sbjct: 310 -----GPGAVPIDVWLGEGAGFDALVITGPNTGGKTVTLKTVGLLALMHQAGLHVPAAPG 364
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
L F I D+GD QS+EQ+LSTFS H+S IV +LVL+DEIG+GTDP EG
Sbjct: 365 SALGVFPQIFCDVGDEQSIEQSLSTFSSHMSAIVGFARAARPGALVLLDEIGAGTDPDEG 424
Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
ALA ++L++ R R L V TTHY+ L + ENA+ EF ETLRPTYR+ G
Sbjct: 425 AALAIALLEHFRRRGCLVVATTHYSALKAYAYQQPGVENASVEFDAETLRPTYRLWIGLP 484
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
G S AL IA+ +G I+QRA++++ HR EL ++ +RR +
Sbjct: 485 GKSMALAIAQRLGLPEPILQRAREVM-----GAGAHRVEELIAAMEADRRAI 531
>gi|257886737|ref|ZP_05666390.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|257822791|gb|EEV49723.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
Length = 786
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|229151665|ref|ZP_04279866.1| DNA mismatch repair protein [Bacillus cereus m1550]
gi|228631726|gb|EEK88354.1| DNA mismatch repair protein [Bacillus cereus m1550]
Length = 633
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I + + AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEALEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|228953749|ref|ZP_04115789.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229070921|ref|ZP_04204149.1| DNA mismatch repair protein [Bacillus cereus F65185]
gi|229080685|ref|ZP_04213204.1| DNA mismatch repair protein [Bacillus cereus Rock4-2]
gi|423425531|ref|ZP_17402562.1| MutS2 family protein [Bacillus cereus BAG3X2-2]
gi|423503867|ref|ZP_17480459.1| MutS2 family protein [Bacillus cereus HD73]
gi|449090385|ref|YP_007422826.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228702623|gb|EEL55090.1| DNA mismatch repair protein [Bacillus cereus Rock4-2]
gi|228712311|gb|EEL64258.1| DNA mismatch repair protein [Bacillus cereus F65185]
gi|228805983|gb|EEM52562.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401112022|gb|EJQ19903.1| MutS2 family protein [Bacillus cereus BAG3X2-2]
gi|402458307|gb|EJV90056.1| MutS2 family protein [Bacillus cereus HD73]
gi|449024142|gb|AGE79305.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 633
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREFHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|431762509|ref|ZP_19551071.1| MutS2 protein [Enterococcus faecium E3548]
gi|430625201|gb|ELB61851.1| MutS2 protein [Enterococcus faecium E3548]
Length = 786
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|340357348|ref|ZP_08679966.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
gi|339617796|gb|EGQ22410.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
Length = 785
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 269/539 (49%), Gaps = 59/539 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+ + LE+ Q+LL +T LA+++ + + + I DI A G +LS E+ +
Sbjct: 33 QLTPSRELEDVQRLLEETDEGLALLRIRGNVPMGGIHDIRPHAKRAQIGGMLSAMELVEI 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
T+RA + + ++ EA +G+ L+ + LT +E +I ID ++
Sbjct: 93 ADTIRA-SRILRQFLEAVTAEGEI--NIPHLIARKEAMPILTGVEHEINAAIDDNGRVV- 148
Query: 129 DRASEDLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS L IR + R E L+S + K AA++ + ++T R R + +K
Sbjct: 149 DSASSALRSIRQSLRVQESRVRERLESYTRGKNAAKM-----LSDAIVTIRNDRYVIPVK 203
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIA 242
A ++ G+ ++SSSG T F+EP V+ NN E+R L E E IL L+A +
Sbjct: 204 AEYRSHY-GGVIHDMSSSGQTLFIEPDAVVQANN-EIRSLKVKEQEEIEKILLALSASVR 261
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ ++ L+ + EID+ A+A + P V+ D + + +HPLL
Sbjct: 262 EVAHDLFTLVQLLAEIDVILAKAKYGTANKCTKPA------VNADGYMRLTKARHPLL-- 313
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P++ V N+ I+ + +VITGPNTG
Sbjct: 314 --------------PIEEAVANT-------------------IEFGQDITTIVITGPNTG 340
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KT+GL +LM+++GL +P + + FD I ADIGD QS+EQ+LSTFS H+ I
Sbjct: 341 GKTVTLKTVGLCTLMAQSGLPIPVLDGSEIAVFDSIYADIGDEQSIEQSLSTFSSHMVNI 400
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
VDIL+ SL+L DE+GSGTDP EG ALA SIL + + TTHY +L
Sbjct: 401 VDILKKFDDRSLLLFDELGSGTDPQEGAALAISILDEVHGSGARVMATTHYPELKAYGYN 460
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
NA+ EF ++TL PTYR+L G G SNA I+K +G II RA+ R E
Sbjct: 461 RPGVANASVEFDIDTLSPTYRLLIGVPGRSNAFEISKRLGLHNHIIDRAKGFTGEDRGE 519
>gi|431757245|ref|ZP_19545876.1| MutS2 protein [Enterococcus faecium E3083]
gi|430619534|gb|ELB56361.1| MutS2 protein [Enterococcus faecium E3083]
Length = 786
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|404328575|ref|ZP_10969023.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 786
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 182/575 (31%), Positives = 281/575 (48%), Gaps = 78/575 (13%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+ ++LE + L +T +++ + + I DI L G +L E+ +
Sbjct: 33 QLQPAETLEAVRNLQEETDEGATVLRLKGSIPFGGITDIRPALKRTKIGSMLLAKELIDI 92
Query: 69 RRTLRAV---NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKL 124
T+R + + L E ELD P+L L+++ LE +I ID +
Sbjct: 93 ADTIRGIRLMKSFILDLAEDQELD-------LPILTGLVEHMTVPGGLEREIRSAIDDQG 145
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGI 182
+ +D AS L IR + + DS +K+ I + G + + +IT R R + +
Sbjct: 146 GV-MDSASTTLRHIRGQ----IRTFDSRVKQKLENIVHSSGKMLSEAIITIRNDRQVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ GI + S+SGAT F+EP+ V+ NN E E IL +L
Sbjct: 201 KQEYRGAF-GGIVHDQSASGATLFIEPQSIVDLNNQLSEARAKERHEVERILRVL----- 254
Query: 243 KSEREIKY---LMDRVL---EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
SE+ +Y L+D V ++D FA+A + M P L+ + I ++ +
Sbjct: 255 -SEKTAEYADGLLDSVAGLAQLDFIFAKASYGHQMKASRPRLNDRG------VIRLKRAR 307
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPL+ +P D VPID+ + +T ++I
Sbjct: 308 HPLI---------------SP--------------------DRVVPIDVLFDEQTHALII 332
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT S+KT GL +LM+++GL +PA+ + F + ADIGD QS+EQ+LSTFS
Sbjct: 333 TGPNTGGKTVSLKTTGLLTLMAQSGLQIPAEEGSEVSVFKKVFADIGDEQSIEQSLSTFS 392
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ IV IL V +SLVL DE+G+GTDP EG AL+ +IL + R V TTHY++L
Sbjct: 393 SHMTNIVGILGQVDDQSLVLFDELGAGTDPQEGAALSIAILDTVYGRGATIVCTTHYSEL 452
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
+ NA+ EF +ETL PTYR+L G G SNA I+K +G +II A
Sbjct: 453 KAYAYERPGVMNASVEFDVETLSPTYRLLLGIPGRSNAFEISKKLGLPEEIIDEA----- 507
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
RL+ + ++ ++ SL + R+ E++ A L
Sbjct: 508 RLQISHETNQIDKMIASLEQNRKAAETEEENARKL 542
>gi|257892933|ref|ZP_05672586.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257829312|gb|EEV55919.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
Length = 786
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|206977729|ref|ZP_03238620.1| MutS2 family protein [Bacillus cereus H3081.97]
gi|206744030|gb|EDZ55446.1| MutS2 family protein [Bacillus cereus H3081.97]
Length = 786
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 279/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQAC------HPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|410583601|ref|ZP_11320706.1| MutS2 family protein [Thermaerobacter subterraneus DSM 13965]
gi|410504463|gb|EKP93973.1| MutS2 family protein [Thermaerobacter subterraneus DSM 13965]
Length = 881
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 261/552 (47%), Gaps = 79/552 (14%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
+ L + DI L A G +L+P E+ AV T R + L QR +
Sbjct: 63 IPLGGLADIRRSLQRAAKGGMLAPDELLAVAGTARGARRLKSFLA----------QREAT 112
Query: 99 LLELLKNCNFLTE---LEEKIGFCI--DCKLLIILDRASEDLELIRAERKRNMENLDSLL 153
L LT LEE + I D + + D AS L +R R + +L+ +
Sbjct: 113 CPRLAARAARLTPQPALEEAVAAAIGEDGR---VRDEASPRLASLR----RRLADLEEAI 165
Query: 154 KKVAAQIFQ----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 209
++ ++ + A + +PL+T+RR R + +KA + +P G+ + S+SGAT F+EP
Sbjct: 166 RRRLEEMIRSPQWAAALQEPLVTQRRGRFVLPVKAEARAQVP-GVVHDQSASGATLFIEP 224
Query: 210 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
VE N E E IL+ LT +A + E+ ++ + E+D AR A
Sbjct: 225 MAVVELGNRLREAEAEEQEEVERILAELTRLVAAAGDELAATLEELAELDAIVARGRLAL 284
Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
M P + V + +HPLL + DV E
Sbjct: 285 AMRAERPETLDRPRVDLKRA------RHPLL-------------GPGAVAIDVWLGE--- 322
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
G +VITGPNTGGKT ++KT+GL +LM +AGL++PA
Sbjct: 323 ---GAGFD---------------TLVITGPNTGGKTVTLKTVGLLALMHQAGLHIPAAPG 364
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
L F I D+GD QS+EQ+LSTFS H+S IV +LVL+DEIG+GTDP EG
Sbjct: 365 SALGVFPQIFCDVGDEQSIEQSLSTFSSHMSAIVGFARAARPGALVLLDEIGAGTDPDEG 424
Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
ALA +++++ R R L V TTHY+ L + ENA+ EF ETLRPTYR+ G
Sbjct: 425 AALAVALIEHFRSRGCLVVATTHYSALKAYAYQQPGVENASVEFDPETLRPTYRLWIGLP 484
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
G S AL IA+ +G I+QRA++++ HR EL ++ +RR++ A
Sbjct: 485 GKSMALTIAQRLGLPEPIVQRARQVM-----GAGAHRVEELIAAMEADRREI-------A 532
Query: 570 SLHAEIMDLYRE 581
+L AE RE
Sbjct: 533 ALRAEAETRRRE 544
>gi|331089007|ref|ZP_08337914.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406459|gb|EGG85972.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 791
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 190/587 (32%), Positives = 278/587 (47%), Gaps = 102/587 (17%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+++K +I FG + +EES K L +I G LN+A +LL
Sbjct: 57 IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90
Query: 63 SEICAV-RRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
IC + T RA ++ + L + ++ D L+ +PL ++ C ++E E
Sbjct: 91 -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
I D AS L+ IR R+M NL+ + + + + LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSMNNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L E E IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E A+ EI+ + ++D FAR A M PIL+ + I I
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL + VPI + + E ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA EF +E LRPTYR+L G G SNA I+ +G II A+K
Sbjct: 450 ELKIYALSTPGVENACCEFDVENLRPTYRLLIGIPGKSNAFAISGKLGLPDYIIDDAKK- 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
R Q +L L RR +E + A+ E L R+
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQ 551
>gi|423558950|ref|ZP_17535252.1| MutS2 family protein [Bacillus cereus MC67]
gi|401190719|gb|EJQ97760.1| MutS2 family protein [Bacillus cereus MC67]
Length = 633
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+++K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGNI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ I ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASWKAEEAMEEYQILATLSGMILENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|346307521|ref|ZP_08849654.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
4_6_53AFAA]
gi|345905454|gb|EGX75193.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
4_6_53AFAA]
Length = 792
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 217/414 (52%), Gaps = 56/414 (13%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ +P G+ + SS+G+T F+EP V+ NN L E
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+A+ A+ EI+ + E+D FAR A M+ P+ + + +
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+HPLL + VPI + +
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++++TGPNTGGKT S+KT+GL LM +AGL++PA + L F + ADIGD QS+
Sbjct: 325 GDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ +V ++ V +SLVL DE+G+GTDP+EG ALAT+IL +L + +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA IA +G II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504
Query: 529 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ A+ L E + E ++ L+ + LES RT A EI RE
Sbjct: 505 EEAKTHLTE----------QDESFEDLLTD---LESSRRTIAKEQEEIAAYRRE 545
>gi|251780590|ref|ZP_04823510.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084905|gb|EES50795.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 785
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 266/532 (50%), Gaps = 60/532 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P+ + E + L A +M+ + + DI IL A G L+P ++ V
Sbjct: 35 VPYDNTYEINNSLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94
Query: 71 TL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
L R + +K+ E E+ S + L +L N L + E+ D +
Sbjct: 95 MLTATRRMQEFFKR--EEQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----V 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
D AS L IR R+++ +S +++ I ++ + L T R R + +KA
Sbjct: 146 SDNASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAE 201
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+K +P G+ + SS+GAT F+EP G V NN L E AE +LS L+ ++ +
Sbjct: 202 YKSSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNA 260
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + +D F++ +A ++ + P+ V D NI +HPL+
Sbjct: 261 EHCESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE---- 310
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
D VP+D+ + E ++ITGPNTGGKT
Sbjct: 311 -------------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKT 339
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+EQ+LSTFS H++ IV+I
Sbjct: 340 VTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNI 399
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+E +R+SL+L DE+G GTDP+EG ALA +I++ L + + TTHY++L R
Sbjct: 400 MEYDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKER 459
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ENA+ EF + TLRPTYR+L G G SNA I+K IG +++I A+ + +
Sbjct: 460 VENASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSK 511
>gi|228928531|ref|ZP_04091570.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228831136|gb|EEM76734.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 633
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNLDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|255307157|ref|ZP_05351328.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255]
Length = 636
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 250/520 (48%), Gaps = 62/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + ++ ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHIPLEGLFNVGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E + YSP L N +E++I +CI + AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154
Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
RN+E + L K I + +I+KR R + IK+S+K + +G
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ SS G T F+EP + L E EE ILS LT I + +IK ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+D ++ R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|365159845|ref|ZP_09356021.1| MutS2 family protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|363624826|gb|EHL75890.1| MutS2 family protein [Bacillus sp. 7_6_55CFAA_CT2]
Length = 633
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYFAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|257877500|ref|ZP_05657153.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
gi|257811666|gb|EEV40486.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
Length = 787
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 241/468 (51%), Gaps = 71/468 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV++L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKL--------ESQARTAASLHAEIMDLY 579
+ + +E+ L E RRK+ + AA LH E+ Y
Sbjct: 512 -DGESQDLNEMIADL-ENRRKMTETEYLEVRHHVKEAARLHQELEAAY 557
>gi|423436933|ref|ZP_17413914.1| MutS2 family protein [Bacillus cereus BAG4X12-1]
gi|401121264|gb|EJQ29055.1| MutS2 family protein [Bacillus cereus BAG4X12-1]
Length = 633
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREFHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|229032198|ref|ZP_04188171.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
gi|228728978|gb|EEL79981.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
Length = 786
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 279/568 (49%), Gaps = 64/568 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + + PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGNAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYRE 581
L E ++ E A +L + L+RE
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRE 553
>gi|423519234|ref|ZP_17495715.1| MutS2 protein [Bacillus cereus HuA2-4]
gi|401159591|gb|EJQ66974.1| MutS2 protein [Bacillus cereus HuA2-4]
Length = 786
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 255/499 (51%), Gaps = 61/499 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDSGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
A + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAPKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
NN E R+ + E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVER--ILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKA 291
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PI++++ ++ + +HPL+ +P
Sbjct: 292 TKPIVNNERYMDLKQA------RHPLI---------------DP---------------- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + +
Sbjct: 315 ----EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEIC 370
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA
Sbjct: 371 VFKNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALA 430
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL + +R V TTHY +L + NA+ EF + TL PTY++L G G SN
Sbjct: 431 ISILDEVCNRGARVVATTHYPELKAYGYNRDQVINASVEFDVNTLSPTYKLLIGVPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ 532
A I+K +G ++I RA+
Sbjct: 491 AFEISKRLGLSDRVIDRAR 509
>gi|296331594|ref|ZP_06874063.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675447|ref|YP_003867119.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151189|gb|EFG92069.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413691|gb|ADM38810.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 785
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 290/573 (50%), Gaps = 65/573 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSPSE + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL+ + + L++LE I CID + LD ASE
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEQTAEHTEEL- 266
Query: 250 YLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L RVL+ +D FA+A +A+ + PI++ V + +HPLL
Sbjct: 267 FLDLRVLQTLDFIFAKARYAKAVKATKPIMNDNGFVRLKKA------RHPLL-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P V N DI++ + +VITGPNTGGKT ++
Sbjct: 313 --------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IV ILE
Sbjct: 346 KTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQ 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L N
Sbjct: 406 VNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 466 ASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPNHIIGQAKSEM-----TAEHNEVD 520
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ SL + +++ E + S+ E L++E
Sbjct: 521 TMIASLEQSKKRAEEELSETESIRKEAEKLHKE 553
>gi|30021583|ref|NP_833214.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 14579]
gi|228940550|ref|ZP_04103116.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973467|ref|ZP_04134052.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980029|ref|ZP_04140346.1| DNA mismatch repair protein [Bacillus thuringiensis Bt407]
gi|229128756|ref|ZP_04257734.1| DNA mismatch repair protein [Bacillus cereus BDRD-Cer4]
gi|384187477|ref|YP_005573373.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410675796|ref|YP_006928167.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|452199848|ref|YP_007479929.1| Clostridial MutS2-related protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|29897138|gb|AAP10415.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 14579]
gi|228654949|gb|EEL10809.1| DNA mismatch repair protein [Bacillus cereus BDRD-Cer4]
gi|228779696|gb|EEM27946.1| DNA mismatch repair protein [Bacillus thuringiensis Bt407]
gi|228786247|gb|EEM34241.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819056|gb|EEM65115.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941186|gb|AEA17082.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409174925|gb|AFV19230.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|452105241|gb|AGG02181.1| Clostridial MutS2-related protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 633
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I + + AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYNIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|30263446|ref|NP_845823.1| MutS family protein [Bacillus anthracis str. Ames]
gi|47528833|ref|YP_020182.1| MutS family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186294|ref|YP_029546.1| MutS family protein [Bacillus anthracis str. Sterne]
gi|65320772|ref|ZP_00393731.1| COG1193: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|165872354|ref|ZP_02216990.1| putative MutS family protein [Bacillus anthracis str. A0488]
gi|167632088|ref|ZP_02390415.1| putative MutS family protein [Bacillus anthracis str. A0442]
gi|167637139|ref|ZP_02395419.1| putative MutS family protein [Bacillus anthracis str. A0193]
gi|170689080|ref|ZP_02880279.1| putative MutS family protein [Bacillus anthracis str. A0465]
gi|170708531|ref|ZP_02898972.1| putative MutS family protein [Bacillus anthracis str. A0389]
gi|177654627|ref|ZP_02936451.1| putative MutS family protein [Bacillus anthracis str. A0174]
gi|190564754|ref|ZP_03017675.1| putative MutS family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227813679|ref|YP_002813688.1| putative MutS family protein [Bacillus anthracis str. CDC 684]
gi|229604749|ref|YP_002867693.1| putative MutS family protein [Bacillus anthracis str. A0248]
gi|254686062|ref|ZP_05149921.1| putative MutS family protein [Bacillus anthracis str. CNEVA-9066]
gi|254738533|ref|ZP_05196236.1| putative MutS family protein [Bacillus anthracis str. Western North
America USA6153]
gi|254752850|ref|ZP_05204886.1| putative MutS family protein [Bacillus anthracis str. Vollum]
gi|254759122|ref|ZP_05211148.1| putative MutS family protein [Bacillus anthracis str. Australia 94]
gi|386737247|ref|YP_006210428.1| DNA mismatch repair protein [Bacillus anthracis str. H9401]
gi|421510341|ref|ZP_15957236.1| DNA mismatch repair protein [Bacillus anthracis str. UR-1]
gi|421637098|ref|ZP_16077696.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
gi|30258081|gb|AAP27309.1| putative MutS family protein [Bacillus anthracis str. Ames]
gi|47503981|gb|AAT32657.1| putative MutS family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180221|gb|AAT55597.1| MutS family protein, putative [Bacillus anthracis str. Sterne]
gi|164711907|gb|EDR17448.1| putative MutS family protein [Bacillus anthracis str. A0488]
gi|167514646|gb|EDR90012.1| putative MutS family protein [Bacillus anthracis str. A0193]
gi|167532386|gb|EDR95022.1| putative MutS family protein [Bacillus anthracis str. A0442]
gi|170126533|gb|EDS95419.1| putative MutS family protein [Bacillus anthracis str. A0389]
gi|170666947|gb|EDT17711.1| putative MutS family protein [Bacillus anthracis str. A0465]
gi|172080592|gb|EDT65676.1| putative MutS family protein [Bacillus anthracis str. A0174]
gi|190564071|gb|EDV18035.1| putative MutS family protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227002484|gb|ACP12227.1| putative MutS family protein [Bacillus anthracis str. CDC 684]
gi|229269157|gb|ACQ50794.1| putative MutS family protein [Bacillus anthracis str. A0248]
gi|384387099|gb|AFH84760.1| DNA mismatch repair protein [Bacillus anthracis str. H9401]
gi|401819662|gb|EJT18837.1| DNA mismatch repair protein [Bacillus anthracis str. UR-1]
gi|403395894|gb|EJY93132.1| DNA mismatch repair protein [Bacillus anthracis str. BF1]
Length = 633
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|430842214|ref|ZP_19460129.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1007]
gi|430493295|gb|ELA69598.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1007]
Length = 642
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 255/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S + K I + +I ++ + IKAS+K + DG ++ S+ G T+
Sbjct: 161 EKEIQSKMLKFLRHPKNKEMIQEAIIVQKGECYTIPIKASYKNKV-DGTIIDESNKGTTF 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGSTPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D V +D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVSLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|257895303|ref|ZP_05674956.1| DNA mismatch repair protein [Enterococcus faecium Com12]
gi|257831868|gb|EEV58289.1| DNA mismatch repair protein [Enterococcus faecium Com12]
Length = 576
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 221/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM 511
>gi|347542281|ref|YP_004856917.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985316|dbj|BAK80991.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 783
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 271/528 (51%), Gaps = 62/528 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
PF ++EE + LN+TS A+ ++ L + ++D+ L G +S EI +
Sbjct: 36 PFS-TMEEVIRNLNETSEAVEFIKEFGLPNFVGLDDVYPYLEKIDKGGSVSIKEIYKIGT 94
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIILD 129
TLR + V L+ + + L Y N + LE++I I D + I D
Sbjct: 95 TLRCIREVKDYLSNRSLI---YLNYY------YDNISTFKYLEDEIFKTIKDGEE--ISD 143
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHK 187
ASE+L IR E + + + +K+ ++I + + + + + T R R C+ +KA +K
Sbjct: 144 FASENLFKIRKE----LRSKTAAIKRKLSEILKTYSKYLQENIFTVRGDRYCIPVKAEYK 199
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 200 SQIQ-GIVHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDS 258
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I + V ++ F + +A +DG+ P +S + + S+ +HPL+ S+
Sbjct: 259 IYLSIKIVYFLEFIFGKGNYAIEIDGIKPDISDEEDIYLISA------RHPLIDRESV-- 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+++ + + ++ITGPNTGGKT +
Sbjct: 311 ---------------------------------VPLNLNFMSDRKAIIITGPNTGGKTVT 337
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL LM+ +GL++PA ++ + + I ADIGD QSLEQNLSTFS HI I++I
Sbjct: 338 LKTLGLMHLMAHSGLFIPAYEGSKIMFLNEIFADIGDEQSLEQNLSTFSSHIKNIINITN 397
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V ++L+L+DE+GSGTDP EG ALA SI+++ + + TTHY+ L E
Sbjct: 398 NVKDKTLILLDEVGSGTDPEEGAALAISIIEHFINSGCKLMGTTHYSQLKTYAINSEDIE 457
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL+PTYR+ G G SNA IA S+G + II+ A+K +
Sbjct: 458 NASVEFDVKTLKPTYRLNVGIPGKSNAFIIADSLGMNSSIIESAKKYL 505
>gi|423453203|ref|ZP_17430056.1| MutS2 family protein [Bacillus cereus BAG5X1-1]
gi|401138883|gb|EJQ46448.1| MutS2 family protein [Bacillus cereus BAG5X1-1]
Length = 633
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+++K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ I ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASWKAEEAMEEYQILATLSGMILENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|169827790|ref|YP_001697948.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41]
gi|168992278|gb|ACA39818.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41]
Length = 634
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 252/510 (49%), Gaps = 53/510 (10%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + + +I I+ G +L PSE+ ++ LR N+ KK
Sbjct: 47 LNETTEARVIVDAEGHVPFLGVSNIEHIMTKLAKGMILDPSELISMSDFLRGCRNI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + KN +EE+I F I + AS +L+ IR
Sbjct: 106 MLDKEFFAPVLSSYANSMAEFKN------VEEEINFAIKANR--VDSAASRELKRIRHHI 157
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ E + L K I + I+++ R + IKAS+K + G + +SS G
Sbjct: 158 ETTEEKIKERLTKFLNNSANKTYIQEFFISQKDDRYTIPIKASYKNHV-QGTIVEISSKG 216
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
AT FMEP + N L E EE IL+ L+ + + M+ + + D+ F
Sbjct: 217 ATVFMEPSIVAKLNGELATLKAEEAVEEYQILASLSGLLMNHLHALHINMELISQYDMVF 276
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A F++ + G+ P L+ ++ I G +HPLL G++
Sbjct: 277 AKAKFSKQIGGMEPRLNDYGYIQV-----ING-RHPLLPGNA------------------ 312
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VP+ + + R ++ITGPN GGKT +KT+GL +L + +G
Sbjct: 313 ------------------VPLQFTIGKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++ A L FD I DIGD+QS+E LSTFS H+ + DI+ + +L+++DEIGS
Sbjct: 355 HIVADEGTELAIFDHIFVDIGDNQSMENALSTFSSHMKNLSDIMRASNNHTLLILDEIGS 414
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA +IL+ + + TTHY ++ + F NAA F+ ETL P Y
Sbjct: 415 GTEPNEGAALAIAILEEFYQMGCITIATTHYGEIKRFSEMHPDFMNAAMRFNSETLEPLY 474
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+++ G++G+SNAL I+K + +++QRAQ
Sbjct: 475 QLMIGTSGESNALWISKKMNVRAEVLQRAQ 504
>gi|335038522|ref|ZP_08531758.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
gi|334181583|gb|EGL84112.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
Length = 787
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 266/500 (53%), Gaps = 69/500 (13%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKL-TEAAELDGDSLQRYSPL 99
I DI + A+ G L +E+ V +T+ R + + +K+ E EL S L
Sbjct: 68 IRDIRPAVKRAMIGSRLDAAELLDVAQTIAGGRKLKHFLEKVCAEHGEL--------SIL 119
Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
L + L ++E+ I CID + +LD AS L+ IR R R+ E +K+ Q
Sbjct: 120 ARLEEQIRPLRDVEQSIKSCID-EHGDVLDSASPALKEIR-NRIRHAEQR---VKRQLEQ 174
Query: 160 IFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
I +A + +P+IT R+ R C+ +KA +++ G+ + S+SGAT F+EP+ V
Sbjct: 175 IVRAPANQKMLQEPIITIRQDRYCIPVKAEYRHHF-GGLVHDQSASGATLFVEPEAVVAI 233
Query: 216 NNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
NN L +++ EE I L+ LT ++ ++ ++K + + E+D FA+A +A+ +
Sbjct: 234 NN---ELREAKLQEEKEIDRILTGLTRQVGEAGEDLKNNVQALAELDFLFAKAYYARSIR 290
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
V P L+ Q + + +HPL+ +
Sbjct: 291 AVQPQLNDQGYFKLIRA------RHPLIPAQDV--------------------------- 317
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
VP ++ E +VITGPNTGGKT ++KTLGL +LM+ +GL++PA+ +
Sbjct: 318 --------VPTTFELGGEYTCMVITGPNTGGKTVTLKTLGLLTLMACSGLFIPAEEGSHV 369
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
+ ADIGD QS+EQ+LSTFS H++ IVDILE + SL+L DE+G+GTDP+EG AL
Sbjct: 370 AVVSGVYADIGDEQSIEQSLSTFSSHMTHIVDILEKMDENSLLLFDELGAGTDPTEGAAL 429
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +IL ++ R L V TTHY++L NA+ EF ETL+PTYR+L G G S
Sbjct: 430 AMAILDFVHSRGALVVATTHYSELKAYAYSRPGVINASVEFDTETLKPTYRLLVGVPGRS 489
Query: 513 NALNIAKSIGFDRKIIQRAQ 532
NA +IA+ +G +II+ A+
Sbjct: 490 NAFHIARRLGLKEEIIETAK 509
>gi|255656133|ref|ZP_05401542.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63]
gi|296450435|ref|ZP_06892191.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP08]
gi|296879442|ref|ZP_06903436.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP07]
gi|296260696|gb|EFH07535.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP08]
gi|296429588|gb|EFH15441.1| DNA mismatch repair protein MutS2 [Clostridium difficile NAP07]
Length = 636
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 252/519 (48%), Gaps = 60/519 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + + ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHVPLEGLFNAGSTIDKIEKGMVIEPIELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ E E +L Y+ + KN +E++I +CI + AS++L+ +R
Sbjct: 105 FMLEK-EFYSPTLSSYALNITECKN------IEDEINYCIKSNK--VDSNASKELKKVR- 154
Query: 141 ERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
RN+E + L K I + +I+KR R + IK+S+K + DG L
Sbjct: 155 ---RNIEITEAKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-DGTIL 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SS G T F+EP + + L E EE ILS LT I + +IK ++ +
Sbjct: 211 DTSSKGNTVFIEPISVSNLSTELIMLKADETIEEYKILSYLTELIFEKISQIKLNIEILS 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 271 EYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA------------ 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP+D ++ R ++ITGPN GGKT ++KT+GL +L
Sbjct: 313 ------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLTL 348
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LVL
Sbjct: 349 MVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMNLSNNSTLVL 408
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F E
Sbjct: 409 FDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDKE 468
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
TL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 469 TLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|166030474|ref|ZP_02233303.1| hypothetical protein DORFOR_00135 [Dorea formicigenerans ATCC
27755]
gi|166029726|gb|EDR48483.1| MutS2 family protein [Dorea formicigenerans ATCC 27755]
Length = 792
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 266/540 (49%), Gaps = 78/540 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
+I G L S G+LL IC V T V N + + A+ D L Y E L
Sbjct: 80 EIGGTLGS---GELL---RICKVLETAGHVKNYGRH--DNADDMQDILDGY---FEQLVP 128
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG- 164
+ L+ +I CI + I D AS +L+ IR R M ++ + + +
Sbjct: 129 VSILST---EIRRCIPAEDEIS-DDASPELKRIR----RAMGQINDKVHATLSSMVNGSL 180
Query: 165 --GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
+ P+IT R R C+ +KA ++ +P G+ + SS+G+T F+EP V+ NN L
Sbjct: 181 RTYLQDPIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKEL 239
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
E E IL+ L+A+ A+ EI+ + E+D FAR A M+ P+ + +
Sbjct: 240 YGKEQEEIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQER 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
+ +HPLL + VP
Sbjct: 300 RIRIREG------RHPLLDKKKV-----------------------------------VP 318
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
I + + + ++++TGPNTGGKT S+KT+GL LM +AGL++PA + L F + ADI
Sbjct: 319 ISLTLGEDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQNLSTFS H++ +V ++ V +SLVL DE+G+GTDP+EG ALAT+IL +L
Sbjct: 379 GDEQSIEQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHC 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ + TTHY++L ENA+ EF +ETLRPTYR+L G G SNA IA +G
Sbjct: 439 QGIRTMATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLG 498
Query: 523 FDRKIIQRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
II+ A+ L E + E ++ L+ + LES RT A EI RE
Sbjct: 499 LPDYIIEEAKTHLTE----------QDESFEDLLTD---LESSRRTIAKEQEEIAAYRRE 545
>gi|425738677|ref|ZP_18856935.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
gi|425479024|gb|EKU46205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
Length = 782
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 266/545 (48%), Gaps = 56/545 (10%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ + A G +L+ E+ A++R ++ N + E D + Y L
Sbjct: 65 LSGLSKISDYVKRATIGSVLNVKELNAIKRVIQVQNQFKTFYNQMVEEDEKIV--YPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E ++ LT+L + I C + D AS L IR++ R + LD ++K
Sbjct: 123 EQIEQLPVLTDLYQTIHQT--CDESDLFDDASPTLHSIRSKISTTNHRIRQQLDKIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL + E E IL+ LT +A + ID A+A +A+ + G P
Sbjct: 236 NQISRLRSEEDTERARILTELTTLVATDSEGCLSAESIMGHIDFLTAKARYARSIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + + HPLL ++ SN+ + D+E
Sbjct: 296 TFTTNRDIYLPKAF------HPLLDAETV------VSNTIEFEPDIE------------- 330
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L FD
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSKLGVFD 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDP+EG LA SI
Sbjct: 375 HVFCDIGDEQSIEQSLSTFSSHMKTIVNILDEANQNSLILFDELGAGTDPTEGATLAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+ + L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 435 LDYVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFE 494
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHAE 574
I+K +G +II A+ +V E +S + + E++ +L++ R A ++H E
Sbjct: 495 ISKRLGLKLQIINHAKSMVGHDEKEINAMIESLERNTKRVDEQKIELDALIREAETMHKE 554
Query: 575 IMDLY 579
+ Y
Sbjct: 555 LDQTY 559
>gi|423641508|ref|ZP_17617126.1| MutS2 family protein [Bacillus cereus VD166]
gi|401278306|gb|EJR84241.1| MutS2 family protein [Bacillus cereus VD166]
Length = 633
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I + + AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYNIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|160937675|ref|ZP_02085035.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
gi|158439320|gb|EDP17072.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
Length = 812
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 187/600 (31%), Positives = 286/600 (47%), Gaps = 81/600 (13%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
+ + A P GK+L EE + QT+ A+ ++ + + S I DI L
Sbjct: 18 LTEYAASPLGKALCQNLSPSSDLEEVRTWQAQTTDAVTRIRLKGSVSFSGIRDIGDSLKR 77
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELD----GDSLQRYSPLLELLKNCNFL 109
G LS E+ ++ L E D G+ + L L L
Sbjct: 78 LDIGSSLSIPELLSISSLLTVAARAKAYGRHDGEDDARGTGEPQDDFDSLEPLFAGLEPL 137
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
T L +I CI + + D AS L +R K R L+S+L + + A
Sbjct: 138 TPLNNEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNSILNSNRSYLQDA-- 194
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+IT R R C+ +K+ +K + G+ + S++G+T F+EP + NN L
Sbjct: 195 ----VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMAIIRLNNEMRELEIQ 249
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E A+L+ L+ + A E++ M+ + ++D FA+AG A+ P+ + + +
Sbjct: 250 EQKEIEAVLASLSNQAAPCTEELRMDMELLAQLDFIFAKAGLARHYKCSAPVFNDKGY-- 307
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
I+I+ +HPLL NP VPI++
Sbjct: 308 ----IHIKDGRHPLL---------------NP--------------------QAVVPINV 328
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ E ++++TGPNTGGKT S+KT+GL +LM ++GL++PA L FD + ADIGD
Sbjct: 329 WLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAIFDQVFADIGDE 388
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA +IL +L +
Sbjct: 389 QSIEQSLSTFSAHMTNIVRILNEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKC 448
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L ENA EF++ETL+PTYR+L G G SNA I++ +G
Sbjct: 449 RTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQKLGLPG 508
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTS 585
II A+ +E K E ++ L+ LES T AEI + Y+++ S
Sbjct: 509 YIIDDAKSHLE---------AKDESFEDLLT---SLESSRLTIEKEQAEI-NAYKDEIAS 555
>gi|402835332|ref|ZP_10883901.1| MutS2 family protein [Mogibacterium sp. CM50]
gi|402274829|gb|EJU24000.1| MutS2 family protein [Mogibacterium sp. CM50]
Length = 791
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 261/526 (49%), Gaps = 71/526 (13%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q+ L +T+ A++ ++ + + +I G+L+ G+ LS E+ V R+L V
Sbjct: 44 QEALTETTEAVSVILYKGDIPVGEFGNIIGLLDIVRKGRTLSMRELLTVNRSLVGAREVK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNF------LTELEEKIGFCIDCKLLIILDRASE 133
D L P + ++ C + LE +I CI + + D AS
Sbjct: 104 -----------DFLSSDVPEIPMI--CEISSLIAPIPRLESEINRCILSEDEM-SDNASP 149
Query: 134 DLELIRAE-RKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+L+ IR E R +N +DS + ++ + ++T R R + +K +
Sbjct: 150 ELKRIRREIRNKNESIRHKIDSYTSSGSNNVY----LQDSIVTMRNGRYVIPVKREYSSR 205
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+P G+ + S +GAT+F+EP+ V NN L +E E IL +L+ + + E++
Sbjct: 206 VP-GLIHDQSKTGATFFIEPQAIVNLNNELRELELAEQREIERILQMLSVRVGEHYNELR 264
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ ++++D+ A+ + +DGV P H+ + +NI +HPLL + +
Sbjct: 265 NNQELMVKLDVINAKGRLSVALDGVAP------HLDANGVLNIRAGRHPLLDKNKV---- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VPID+ + + ++ITGPNTGGKT ++K
Sbjct: 315 -------------------------------VPIDVSLGEDYDTLLITGPNTGGKTVTLK 343
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL LM+++GL++P R+P F + A+IGD QS+E NLSTFS H+ DI+
Sbjct: 344 TIGLFILMTESGLHIPCCEESRIPIFRDVFAEIGDEQSIENNLSTFSSHMLNTADIIANA 403
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL+DEIGSGTDP+EG AL ++L+ L+ + V TTHY +L ENA
Sbjct: 404 DANSLVLLDEIGSGTDPAEGAALGIAMLEVLKTKGAHIVATTHYTELKKYALSTEGVENA 463
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+ EF +ETL PTY+I G G SNA I++ +G D II RA L+
Sbjct: 464 SMEFDMETLSPTYKIKIGLPGKSNAFEISRKLGLDSAIIDRAISLM 509
>gi|225851083|ref|YP_002731317.1| MutS2 protein [Persephonella marina EX-H1]
gi|225644908|gb|ACO03094.1| MutS2 protein [Persephonella marina EX-H1]
Length = 777
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 266/541 (49%), Gaps = 70/541 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
IE+ G+L ++ +LSP EI + + L+ ++ K L+ + + +++Q PL L
Sbjct: 78 IEEAIGLL--SIEESILSPKEILDIGKILKISRDIKKVLSPYIK-ERENIQ---PLYRDL 131
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+E I ID ++ D AS DL IR K + L S+L+ +
Sbjct: 132 FSSR---EIERIIEDSIDPSGMV-KDSASRDLLQIRKSIKEVEKTLISILENIINSHKYQ 187
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
I + +IT R+ R + +K + + GI + SSSG T ++EP VE NN RLS
Sbjct: 188 DVIQERIITVRKDRYVIPVKQNFSSKIK-GIIHDRSSSGQTVYIEPVNVVELNN---RLS 243
Query: 224 NSEIAEET---AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
+ +I E IL LT + +I+ D V+ D + F+ GV P +S
Sbjct: 244 DLKIREHIEIRKILKFLTDILRNRLTDIRKTFDAVINFDYLYTVYKFSSEYKGVFPGVSD 303
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
Q +N+ +HPL L +S DF
Sbjct: 304 Q--------LNLIEARHPLFLMNS--------------------------------KDF- 322
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
VP+DIK+E + +VITGPNTGGKT ++KT GL S++ + G+ +P +P FD + A
Sbjct: 323 VPVDIKIEKSKKGLVITGPNTGGKTVTLKTAGLLSMIFQTGIPIPVSEGSEIPVFDWVYA 382
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QS+EQNLST+S HI I +ILE ++ SLVL+DE+ GTDP EG A+ I++ +
Sbjct: 383 DIGDMQSIEQNLSTYSAHIKNIQEILERITERSLVLLDELIPGTDPDEGSAIGIGIMEKI 442
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+++ ++TTH+ + D FE A+ F E L PTY I + S G S A IA+
Sbjct: 443 KEKNAYCMITTHFKQIKMFALSDDYFEVASVGFDRENLTPTYSIHYRSVGQSMAFYIAER 502
Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+GFD I+ RA++ + SE L E KLE H+E++ L +
Sbjct: 503 LGFDADILHRARRYL------------SESSLKLSEAIEKLERYKEAYEKEHSELVRLKK 550
Query: 581 E 581
+
Sbjct: 551 Q 551
>gi|302384796|ref|YP_003820618.1| MutS2 family protein [Clostridium saccharolyticum WM1]
gi|302195424|gb|ADL02995.1| MutS2 family protein [Clostridium saccharolyticum WM1]
Length = 796
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 278/560 (49%), Gaps = 71/560 (12%)
Query: 27 TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TLRAVNNVWKKLTE 84
T AA + Q + + DI L G L +EI ++ T+ A + + E
Sbjct: 51 TDAATRVRQKGSISFGGVRDIRPSLKRLDVGSALGMAEILSISSLLTVSARVKAYGR-HE 109
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+EL DSL+ +LE L N TE++ CI + + D AS L +R R
Sbjct: 110 DSELPEDSLEESFRMLEPLTPVN--TEIKR----CILSEEEVS-DDASPGLHHVR----R 158
Query: 145 NMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+M +++ + I + + +IT R R C+ +K+ HK + G+ + SS+G
Sbjct: 159 SMRSINDKIHTQLNSILNSNRTYLQDAVITMRDGRYCLPVKSEHKSQV-SGMVHDQSSTG 217
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP V+ NN L E E +L+ L+ ++A E++ + + ++D F
Sbjct: 218 STLFIEPMAIVKLNNDLRALEIQEQKEIEMVLADLSNQLAPYLNELETDFEILTKLDFIF 277
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A ++ + PI +++ INI+ +HPLL +P K
Sbjct: 278 AKAALSKHYNASEPIFNTKR------IINIKDGRHPLL---------------DPSKV-- 314
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VPI I + + ++++TGPNTGGKT S+KT+GL +LM ++GL
Sbjct: 315 ------------------VPITIHLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGL 356
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+G+
Sbjct: 357 HIPAFDGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNIVHILGQADSNSLCLFDELGA 416
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA SIL +L + + TTHY++L ENA EF++ETL+PTY
Sbjct: 417 GTDPTEGAALAISILSFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFNVETLKPTY 476
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM----EER 558
R+L G G SNA I++ +G II A+ +E K E ++ L+ E R
Sbjct: 477 RLLIGVPGKSNAFAISQKLGLPDYIIDDAKTHLE---------AKDETFEDLLTHLEENR 527
Query: 559 RKLESQARTAASLHAEIMDL 578
+E + AS E+ L
Sbjct: 528 VTIEKERIQIASYKLEVEQL 547
>gi|374711381|ref|ZP_09715815.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus inulinus CASD]
Length = 783
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 179/560 (31%), Positives = 273/560 (48%), Gaps = 67/560 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + S P I D+ L + G LL E+ + T+R + K
Sbjct: 47 QEATDEGTTVLRLKGSVPF--GGITDVRPALKRSKIGGLLQARELIDLADTIRGARLMKK 104
Query: 81 ---KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
L E EL+ LQ E + + ELE KI ID + + +D AS L
Sbjct: 105 FILNLIEDQELELPILQ------ECTETIDPPGELERKIRRAIDDQGGV-MDSASPALRH 157
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + DS +K+ I ++ G + + LIT R R + +K ++ GI
Sbjct: 158 IRGQ----IRTCDSRVKQKLENIVRSSGKMLSETLITIRNDRQVIPVKQQYRASF-GGIV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP+ V+ NN E E IL +L+ E ++ + ++ +
Sbjct: 213 HDQSASGATLFIEPQAIVDLNNQLSEARAKERHEIERILRVLSEETSEYAEVMLENIEAL 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
++D FA+AG+A + P L+ Q I ++ +HPL+ +
Sbjct: 273 AQLDFIFAKAGYAHEIKATRPKLNDQG------IIRLKKARHPLIDRQRV---------- 316
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPID+ + T ++ITGPNTGGKT S+KT GL +
Sbjct: 317 -------------------------VPIDVLFDEHTHALIITGPNTGGKTVSLKTTGLLT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM+++GL +P F + ADIGD QS+EQ+LSTFS H++ IV IL+ V SLV
Sbjct: 352 LMAQSGLQIPVDEGSEASVFREVFADIGDEQSIEQSLSTFSSHMTNIVTILKRVDFNSLV 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG AL+ SIL + + V TTHY++L + NA+ EF +
Sbjct: 412 LFDELGAGTDPQEGAALSMSILDAVYGKGATIVCTTHYSELKAYAYERQGVMNASVEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-------KLVERLRPERQQHRKS 548
ETL PTYR+L G G SNA I++ +G +II A+ V+++ +Q+RK+
Sbjct: 472 ETLSPTYRLLLGVPGRSNAFEISRKLGLPAEIIAGAKLQISTETNQVDKMIASLEQNRKT 531
Query: 549 ELYQSLMEERRKLESQARTA 568
+ + KLE +AR A
Sbjct: 532 AEREEERARKLKLEVEAREA 551
>gi|423616282|ref|ZP_17592116.1| MutS2 family protein [Bacillus cereus VD115]
gi|401259247|gb|EJR65424.1| MutS2 family protein [Bacillus cereus VD115]
Length = 633
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 287/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGN------IHLMNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +G ++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGFHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL-----RPERQQHRKSEL 550
ETL P Y+++ G +G+SNAL IA + +++RA++ +E + + RK +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMENKEYALEKVNESKIRKPKF 527
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
Q+ E + + R + + LY+E ++ VY
Sbjct: 528 VQAKRESYYEYKVGDRVNLLDYDDFGILYKEKDNFYNVVVY 568
>gi|257888895|ref|ZP_05668548.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|257824951|gb|EEV51881.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
Length = 642
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 254/511 (49%), Gaps = 58/511 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDTLTEQVKKGLVLSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQII 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IK S+K + DG ++ S+ G T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKVSYKNKV-DGTIIDESNKGTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+E + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIELTVVSKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETMTVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ I+ +HP L
Sbjct: 280 KFSREINGITPKINKSEHIV------IKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
D VP+DI++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PDHAVPLDIEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD + D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEVFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFARDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
G TG+S AL IA + K+IQ+A++ +E
Sbjct: 478 VGETGESQALWIAHKMAMSMKLIQQAERYLE 508
>gi|196035615|ref|ZP_03103019.1| putative MutS family protein [Bacillus cereus W]
gi|228947110|ref|ZP_04109405.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229123011|ref|ZP_04252219.1| DNA mismatch repair protein [Bacillus cereus 95/8201]
gi|195991916|gb|EDX55880.1| putative MutS family protein [Bacillus cereus W]
gi|228660595|gb|EEL16227.1| DNA mismatch repair protein [Bacillus cereus 95/8201]
gi|228812589|gb|EEM58915.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 633
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ VS+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEVSAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|366088425|ref|ZP_09454910.1| mutS family ATPase [Lactobacillus zeae KCTC 3804]
Length = 786
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 288/573 (50%), Gaps = 64/573 (11%)
Query: 21 QKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q+ L++T+ A A+ + + +E+I L G +L+ E+ ++ R L+ V+ +
Sbjct: 44 QRALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLNGQELASISRVLQTVSAID 103
Query: 80 KKLTE-AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
K LT+ ++D + L L + L +L ++ +D + D AS +L I
Sbjct: 104 KFLTDLQDQID------FRQLYTLQEELTALPQLSRRLKTAVDPDGTLT-DEASPELHGI 156
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + KR ++ + + + + Q+ + P++T R R + +KA+++ G+ +
Sbjct: 157 REQIKRIESDIRNKMSEYT-RGAQSKYLSDPIVTIRDDRYVIPVKAAYRSKF-GGVVHDQ 214
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S++G T F+EP+ V NN +E AE +L+ L+ E+A +IK +
Sbjct: 215 SATGQTLFVEPQAIVALNNRLREAQMAETAEVNRVLAELSNELAPYTGQIKANAAVLGHF 274
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D A+A A+ P++SS D+ + + +HPL+
Sbjct: 275 DFINAKAKLAKNQKATEPLVSS------DNDVLLRQARHPLI------------------ 310
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
+ VG+ DI + + + +VITGPNTGGKT ++KTLGL LM
Sbjct: 311 -----DPHQVVGN------------DIPLGADYQAMVITGPNTGGKTITLKTLGLLQLMG 353
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
++GL++PA + R+ FD + ADIGD QS+EQNLSTFS H+ IV IL+ +SR SLVL D
Sbjct: 354 QSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSRNSLVLFD 413
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG ALA +IL + + V TTHY +L + NA+ EF +TL
Sbjct: 414 ELGAGTDPQEGAALAIAILDAVGEIGAYVVATTHYPELKLYGYNTPKTINASMEFDSKTL 473
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
+PTYR+L G G SNA +I+ +G + I+ RA+ ++ H + + L +R
Sbjct: 474 QPTYRLLVGVPGRSNAFDISMRLGLPQPIVDRAKSMI-----SSDSHELNNMISDLERQR 528
Query: 559 RKLESQART-------AASLHAEIMDLYREDST 584
+ E+ A +LH E+ D Y+ +T
Sbjct: 529 KAAENARAAAQRQLADAQALHDELADAYKTFTT 561
>gi|28211873|ref|NP_782817.1| recombination and DNA strand exchange inhibitor protein
[Clostridium tetani E88]
gi|38604782|sp|Q891U1.1|MUTS2_CLOTE RecName: Full=MutS2 protein
gi|28204315|gb|AAO36754.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 786
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 189/532 (35%), Positives = 268/532 (50%), Gaps = 71/532 (13%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E + L +T AL ++Q++ P + + DI IL +L P ++ V L
Sbjct: 39 NLYEVEMHLEETMEALDLLQTKGEPPFE--GVYDIRDILIRVEKAMVLLPGQLLKVASIL 96
Query: 73 ----RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
R + V +K E +++ +ELLK LEE I F I I
Sbjct: 97 KSSRRFKDYVGRKHEETPH---KNIEDICEGIELLKG------LEESI-FNIVISDDEIA 146
Query: 129 DRASEDLELIRAE-RKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
DRAS L IR R +N + ++SL++K + + ++ + T R R + ++A
Sbjct: 147 DRASLKLYGIRRSLRDKNDSLRDRVNSLVRKYSPYLQES------IYTIRGDRYVLPVRA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
HK +P G+ + SSSGAT F+EP V NN L E E IL L+ ++ +
Sbjct: 201 EHKGSVP-GLVHDQSSSGATLFIEPMSLVNLNNEIKELLLKEREEIERILEELSLKVYNN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ + E+D FA+A FA + P +S V IEG KHPL+
Sbjct: 260 LDVVNVNAKVIWELDFIFAKAKFASHNNCTLPKVSEDGIVDI-----IEG-KHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
D E VP DI + + ++ITGPNTGGK
Sbjct: 310 ----------------DTEKV---------------VPTDIYLGKDFTSLIITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGL +M +GL +PAK + + +F+ I ADIGD QS+EQ+LSTFS H+ IVD
Sbjct: 339 TVTLKTLGLIHIMGLSGLLIPAKENSTIAFFEEIFADIGDEQSIEQSLSTFSSHMVNIVD 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 399 IISKADHKSLVLFDELGAGTDPTEGAALAISILENLRRRKCKIVATTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+ +E
Sbjct: 459 DVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLGEDIIEEAKNNIE 510
>gi|75761639|ref|ZP_00741589.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74490881|gb|EAO54147.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 638
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 167/591 (28%), Positives = 295/591 (49%), Gaps = 76/591 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL+ + LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR
Sbjct: 44 SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 103
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ K + + + ++P+L N +TE +EE+I F I + + A
Sbjct: 104 CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDVA--A 151
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHK 187
S++L+ IR N++++D +K+ + + I + I+K+ R + IK+S+K
Sbjct: 152 SKELKRIR----NNIDSVDGKIKERLMKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYK 207
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ I + S+ G+T F+EP + N L E EE IL+ L+ + ++
Sbjct: 208 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 266
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
IK M+ + + D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 267 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV--- 317
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+ K+ E R ++ITGPN GGKT
Sbjct: 318 ---------------------------------VPLHFKIGQEYRSLIITGPNAGGKTIV 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+
Sbjct: 345 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ + +L+L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F
Sbjct: 405 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NAA +F+ ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +
Sbjct: 465 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNE 524
Query: 548 SELYQ-SLMEERRKLESQARTAASLHAEIMD------LYREDSTSASISVY 591
S++ + ++E+R ES ++D +Y+E ++ VY
Sbjct: 525 SKIRKPKFVQEKR--ESHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 573
>gi|406026859|ref|YP_006725691.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
gi|405125348|gb|AFS00109.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
Length = 788
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 258/523 (49%), Gaps = 66/523 (12%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R ++ V ++ L A E+ +L+ +++ L +
Sbjct: 80 IENASLSGTELS--HITKLLRAVQVVTEFFRGLA-AEEV---TLKSVPSIVDRL---TLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ +D I LD AS L IR N+ S + K + A + +P
Sbjct: 131 PEVTKRMVASVDEDGRI-LDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEP 188
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R + IKA +K GI + S+SG T ++EP VE NN R +E AE
Sbjct: 189 IITVRDGRFVLPIKAEYKQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAE 247
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ LT I E+ MD V ++D A+A FA V P VS +
Sbjct: 248 VRRILAELTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNV 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
IN+ +HPL+ P V N DI++
Sbjct: 302 INLRKARHPLI----------------PRDQVVAN-------------------DIELGD 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++TGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E
Sbjct: 327 QYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
NLSTFS H+ I+ IL+ S++SLVL+DE+G+GTDP EG ALA +I+ G +
Sbjct: 387 ANLSTFSSHMDNIISILKQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L NA+ EF +ETL+PTYR L G G SNALNIA +G II
Sbjct: 447 TTHYPELKAFAYNRQGIINASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPEAIID 506
Query: 530 RAQ-----------KLVERL--RPERQQHRKSELYQSLMEERR 559
+A+ ++E L + +R EL Q L E R
Sbjct: 507 QARAFTDSENQDINNMIEELTAQTKRAHDEADELDQQLKESTR 549
>gi|315924184|ref|ZP_07920410.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622586|gb|EFV02541.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 793
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 266/527 (50%), Gaps = 57/527 (10%)
Query: 17 LEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE+ L+ T A M +++ ++ + +I ++ A G LS ++ + +LR V
Sbjct: 40 LEEADIWLDWTDEATGMILRNGRAPMAALCNIPEYVHRAEIGSTLSMRQLLEIASSLRVV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASED 134
++ E E ++L R + L C L E+ +KI I K + DRAS
Sbjct: 100 RDMQAYFDEDPE--QEALNRLHNDFDALDPCADLEAEISKKI---IGPKEMS--DRASRA 152
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR E + L ++ + + + +IT R +R V +K ++ +P GI
Sbjct: 153 LNQIRKEITAKNAQITDKLNRIISSSANEKVLQERIITVRNNRYAVPVKQEYRNQIP-GI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
L+ S++GAT F+EP V+ NN LS E E IL LT +IA + + D
Sbjct: 212 VLDKSATGATLFIEPAAVVQLNNELKILSVEEEKEIARILKALTEKIAAYKMVLIADYDV 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSF-DSSINIEGI---KHPLLLGSSLRSLSA 310
++ +D FA+A + GV V+F D N+ + +HPLL
Sbjct: 272 LVHLDFVFAKAAYGLNTGGV--------RVAFKDDRENVLQLLRARHPLL---------- 313
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P ++ V DI V + +VITGPNTGGKT ++KT
Sbjct: 314 -----DPRQA--------------------VASDIAVSKDIHTIVITGPNTGGKTVTLKT 348
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL S+M ++GL++PA+ F + ADIGD QS+EQ+LSTFS H+ V+ ++
Sbjct: 349 IGLLSVMIQSGLFVPAREGSYTRCFREVFADIGDEQSIEQSLSTFSAHMKNTVNFIDKAQ 408
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
++ LVL DE+G+GTDP+EG ALA S+L+ L R V TTHY++L + NA+
Sbjct: 409 KDDLVLFDELGAGTDPTEGAALAISLLEVLHARGVTTVATTHYSELKEYALTTSGIVNAS 468
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
EF +ETL+PTYR+L G G SNA IA+ +G +II RA+ V +
Sbjct: 469 VEFDVETLQPTYRLLIGIPGKSNAFEIAQKLGLKPEIIARARAYVSK 515
>gi|228901957|ref|ZP_04066123.1| DNA mismatch repair protein [Bacillus thuringiensis IBL 4222]
gi|423359564|ref|ZP_17337067.1| MutS2 family protein [Bacillus cereus VD022]
gi|423562155|ref|ZP_17538431.1| MutS2 family protein [Bacillus cereus MSX-A1]
gi|434376390|ref|YP_006611034.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-789]
gi|228857640|gb|EEN02134.1| DNA mismatch repair protein [Bacillus thuringiensis IBL 4222]
gi|401083675|gb|EJP91932.1| MutS2 family protein [Bacillus cereus VD022]
gi|401201042|gb|EJR07920.1| MutS2 family protein [Bacillus cereus MSX-A1]
gi|401874947|gb|AFQ27114.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-789]
Length = 633
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 167/591 (28%), Positives = 295/591 (49%), Gaps = 76/591 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL+ + LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR
Sbjct: 39 SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ K + + + ++P+L N +TE +EE+I F I + + A
Sbjct: 99 CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 146
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHK 187
S++L+ IR N++++D +K+ + + I + I+K+ R + IK+S+K
Sbjct: 147 SKELKRIR----NNIDSVDGKIKERLMKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ I + S+ G+T F+EP + N L E EE IL+ L+ + ++
Sbjct: 203 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
IK M+ + + D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 262 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV--- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+ K+ E R ++ITGPN GGKT
Sbjct: 313 ---------------------------------VPLHFKIGQEYRSLIITGPNAGGKTIV 339
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+
Sbjct: 340 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 399
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ + +L+L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F
Sbjct: 400 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 459
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NAA +F+ ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +
Sbjct: 460 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNE 519
Query: 548 SELYQ-SLMEERRKLESQARTAASLHAEIMD------LYREDSTSASISVY 591
S++ + ++E+R ES ++D +Y+E ++ VY
Sbjct: 520 SKIRKPKFVQEKR--ESHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|423469704|ref|ZP_17446448.1| MutS2 family protein [Bacillus cereus BAG6O-2]
gi|402437783|gb|EJV69804.1| MutS2 family protein [Bacillus cereus BAG6O-2]
Length = 633
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAG----GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+++K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSVNKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ I ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASWKAEEAMEEYQILATLSGMILENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|254723461|ref|ZP_05185249.1| putative MutS family protein [Bacillus anthracis str. A1055]
Length = 633
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISKIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|153815454|ref|ZP_01968122.1| hypothetical protein RUMTOR_01689 [Ruminococcus torques ATCC 27756]
gi|145847096|gb|EDK24014.1| MutS2 family protein [Ruminococcus torques ATCC 27756]
Length = 791
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 279/587 (47%), Gaps = 102/587 (17%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+++K +I FG + +EES K L +I G LN+A +LL
Sbjct: 57 IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90
Query: 63 SEICAV-RRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
IC + T RA ++ + L + ++ D L+ +PL ++ C ++E E
Sbjct: 91 -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
I D AS L+ IR R++ NL+ + + + + LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSINNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L E E IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E A+ EI+ + ++D FAR A M PIL+ + I I
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL + VPI + + E ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA EF +E+LRPTYR+L G G SNA I+ +G II A+K
Sbjct: 450 ELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPGYIIDDAKK- 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
R Q +L L RR +E + A+ E L R+
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQ 551
>gi|257882656|ref|ZP_05662309.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|294622756|ref|ZP_06701711.1| MutS2 family protein [Enterococcus faecium U0317]
gi|416132269|ref|ZP_11597881.1| MutS2 family protein [Enterococcus faecium E4452]
gi|424795296|ref|ZP_18221164.1| MutS2 family protein [Enterococcus faecium S447]
gi|424855055|ref|ZP_18279381.1| MutS2 family protein [Enterococcus faecium R499]
gi|424950176|ref|ZP_18365348.1| MutS2 family protein [Enterococcus faecium R496]
gi|424957193|ref|ZP_18371933.1| MutS2 family protein [Enterococcus faecium R446]
gi|424960033|ref|ZP_18374581.1| MutS2 family protein [Enterococcus faecium P1986]
gi|424966350|ref|ZP_18380154.1| MutS2 family protein [Enterococcus faecium P1140]
gi|424994917|ref|ZP_18406830.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|424998362|ref|ZP_18410055.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|425001768|ref|ZP_18413255.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|425004274|ref|ZP_18415594.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|425012205|ref|ZP_18423037.1| MutS2 family protein [Enterococcus faecium E422]
gi|425018028|ref|ZP_18428507.1| MutS2 family protein [Enterococcus faecium C621]
gi|425032607|ref|ZP_18437636.1| MutS2 family protein [Enterococcus faecium 515]
gi|430827998|ref|ZP_19446128.1| MutS2 protein [Enterococcus faecium E0269]
gi|431746632|ref|ZP_19535457.1| MutS2 protein [Enterococcus faecium E2134]
gi|431767631|ref|ZP_19556078.1| MutS2 protein [Enterococcus faecium E1321]
gi|431775339|ref|ZP_19563612.1| MutS2 protein [Enterococcus faecium E2560]
gi|431780207|ref|ZP_19568392.1| MutS2 protein [Enterococcus faecium E4389]
gi|431781496|ref|ZP_19569643.1| MutS2 protein [Enterococcus faecium E6012]
gi|431786129|ref|ZP_19574145.1| MutS2 protein [Enterococcus faecium E6045]
gi|257818314|gb|EEV45642.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|291597807|gb|EFF28944.1| MutS2 family protein [Enterococcus faecium U0317]
gi|364093369|gb|EHM35646.1| MutS2 family protein [Enterococcus faecium E4452]
gi|402924563|gb|EJX44761.1| MutS2 family protein [Enterococcus faecium S447]
gi|402931801|gb|EJX51358.1| MutS2 family protein [Enterococcus faecium R499]
gi|402933643|gb|EJX53063.1| MutS2 family protein [Enterococcus faecium R496]
gi|402944145|gb|EJX62582.1| MutS2 family protein [Enterococcus faecium R446]
gi|402949000|gb|EJX67094.1| MutS2 family protein [Enterococcus faecium P1986]
gi|402956711|gb|EJX74151.1| MutS2 family protein [Enterococcus faecium P1140]
gi|402978799|gb|EJX94516.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|402983441|gb|EJX98841.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|402985390|gb|EJY00600.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|402990027|gb|EJY04923.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|402994063|gb|EJY08626.1| MutS2 family protein [Enterococcus faecium E422]
gi|403003183|gb|EJY17093.1| MutS2 family protein [Enterococcus faecium C621]
gi|403012545|gb|EJY25764.1| MutS2 family protein [Enterococcus faecium 515]
gi|430484079|gb|ELA61114.1| MutS2 protein [Enterococcus faecium E0269]
gi|430608534|gb|ELB45780.1| MutS2 protein [Enterococcus faecium E2134]
gi|430630584|gb|ELB66939.1| MutS2 protein [Enterococcus faecium E1321]
gi|430640686|gb|ELB76520.1| MutS2 protein [Enterococcus faecium E4389]
gi|430643055|gb|ELB78811.1| MutS2 protein [Enterococcus faecium E2560]
gi|430646202|gb|ELB81696.1| MutS2 protein [Enterococcus faecium E6045]
gi|430649441|gb|ELB84818.1| MutS2 protein [Enterococcus faecium E6012]
Length = 786
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNTYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|331701294|ref|YP_004398253.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
gi|329128637|gb|AEB73190.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
Length = 788
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 258/523 (49%), Gaps = 66/523 (12%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R ++ V ++ L A E+ +L+ +++ L +
Sbjct: 80 IENASLSGTELS--HITKLLRAVQVVTEFFRGLA-AEEV---TLKSVPSIVDRL---TLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ +D I LD AS L IR N+ S + K + A + +P
Sbjct: 131 PEVTKRMVASVDEDGRI-LDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEP 188
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R + IKA +K GI + S+SG T ++EP VE NN R +E AE
Sbjct: 189 IITVRDGRFVLPIKAEYKQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAE 247
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ LT I E+ MD V ++D A+A FA V P VS +
Sbjct: 248 VRRILAELTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNV 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
IN+ +HPL+ P V N DI++
Sbjct: 302 INLRKARHPLI----------------PRDQVVAN-------------------DIELGD 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++TGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E
Sbjct: 327 QYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
NLSTFS H+ I+ IL+ S++SLVL+DE+G+GTDP EG ALA +I+ G +
Sbjct: 387 ANLSTFSSHMDNIISILKQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L NA+ EF +ETL+PTYR L G G SNALNIA +G II
Sbjct: 447 TTHYPELKAFAYNRQGIINASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPAAIID 506
Query: 530 RAQ-----------KLVERL--RPERQQHRKSELYQSLMEERR 559
+A+ ++E L + +R EL Q L E R
Sbjct: 507 QARAFTDSENQDINNMIEELTAQTKRAHDEADELDQQLKESTR 549
>gi|167044223|gb|ABZ08904.1| putative Smr domain protein [uncultured marine microorganism
HF4000_APKG5H11]
Length = 827
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 265/531 (49%), Gaps = 61/531 (11%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A P LE + + + A + Q L+ ED +L A+ G LL E+
Sbjct: 65 RALTPTRDLLEIATRQQETSEAKQYLEQGGGLEFGPEEDFRELLQRALLGGLLRGEELFL 124
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYS--PLL-ELLKNCNFLTELEEKIGFCIDCKL 124
+R LRA A D L R+ PLL + +N L +LE I I
Sbjct: 125 IRELLRA-----------ARYDRTELGRHEEIPLLTSISENIPELGDLERAISGAI-SPA 172
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
+LD AS L +R E + L+ ++++ ++ +A + +PLIT+R RM + IKA
Sbjct: 173 GEVLDNASPVLHNLRREARNAQNRLNEIMERNLRRLQRAELVQEPLITQRNGRMVLLIKA 232
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA---ILSLLTAEI 241
+Y +P GI +VS SGAT F+EP A++ N R + +AEE IL L+ +
Sbjct: 233 EMRYRVP-GIVHDVSDSGATVFVEPMPAIDMGN---RWREARLAEEREVERILRQLSGMV 288
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
S ++ +D + +DL A+A + ++ V P +S Q D + + +HPLL
Sbjct: 289 GLSGEDLLLTLDLIARLDLDMAKARHSAAINAVPPWVSDQE--VADRHLKLVRARHPLLT 346
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
G+ VP+ + ++ + V++ITGPN
Sbjct: 347 GTV------------------------------------VPVSVDLDRDQGVLLITGPNA 370
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT+GL ++M++AGL++PA+ P FD + ADIGD QS++Q++STFS HIS
Sbjct: 371 GGKTVTLKTVGLLAMMAQAGLHVPAEE-AHFPRFDGVYADIGDQQSIQQSMSTFSSHISN 429
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
+ I+ + SLVL+DE+G+ TDP EG ALA+++L+Y + V TTH+ ++
Sbjct: 430 LKGIMSRATVHSLVLVDELGTSTDPEEGSALASAVLRYFQKIGSFVVGTTHHRGVARFVQ 489
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
NA+ + TL PTY + G G S AL IA +G +++I A+
Sbjct: 490 DQPGMVNASVDLDPTTLEPTYHLTLGLPGRSYALTIAARLGVPQEVIDDAR 540
>gi|425052198|ref|ZP_18455823.1| MutS2 family protein [Enterococcus faecium 506]
gi|403035239|gb|EJY46637.1| MutS2 family protein [Enterococcus faecium 506]
Length = 786
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEKVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|317502262|ref|ZP_07960435.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|336440304|ref|ZP_08619896.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316896377|gb|EFV18475.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|336013585|gb|EGN43462.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 791
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 279/587 (47%), Gaps = 102/587 (17%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+++K +I FG + +EES K L +I G LN+A +LL
Sbjct: 57 IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90
Query: 63 SEICAV-RRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
IC + T RA ++ + L + ++ D L+ +PL ++ C ++E E
Sbjct: 91 -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
I D AS L+ IR R++ NL+ + + + + LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSINNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L E E IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E A+ EI+ + ++D FAR A M PIL+ + I I
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL + VPI + + E ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA EF +E+LRPTYR+L G G SNA I+ +G II A+K
Sbjct: 450 ELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPGYIIDDAKK- 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
R Q +L L RR +E + A+ E L R+
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQ 551
>gi|126699762|ref|YP_001088659.1| DNA mismatch repair protein [Clostridium difficile 630]
gi|115251199|emb|CAJ69030.1| DNA mismatch repair protein [Clostridium difficile 630]
Length = 636
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + + ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E + YSP L N +E++I +CI + AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154
Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
RN+E + L K I + +I+KR R + IK+S+K + +G
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ SS G T F+EP + L E EE ILS LT I + +IK ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+D ++ R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|254975741|ref|ZP_05272213.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26]
gi|255093128|ref|ZP_05322606.1| DNA mismatch repair protein [Clostridium difficile CIP 107932]
gi|255314870|ref|ZP_05356453.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55]
gi|255517544|ref|ZP_05385220.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34]
gi|255650655|ref|ZP_05397557.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79]
gi|260683745|ref|YP_003215030.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260687405|ref|YP_003218539.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|306520583|ref|ZP_07406930.1| DNA mismatch repair protein [Clostridium difficile QCD-32g58]
gi|384361374|ref|YP_006199226.1| DNA mismatch repair protein [Clostridium difficile BI1]
gi|260209908|emb|CBA63855.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260213422|emb|CBE05075.1| DNA mismatch repair protein [Clostridium difficile R20291]
Length = 636
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + + ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E + YSP L N +E++I +CI + AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154
Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
RN+E + L K I + +I+KR R + IK+S+K + +G
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ SS G T F+EP + L E EE ILS LT I + +IK ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+D ++ R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|431546278|ref|ZP_19518903.1| MutS2 protein [Enterococcus faecium E1731]
gi|430591597|gb|ELB29626.1| MutS2 protein [Enterococcus faecium E1731]
Length = 786
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|257883965|ref|ZP_05663618.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257819803|gb|EEV46951.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 786
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|430825904|ref|ZP_19444102.1| MutS2 protein [Enterococcus faecium E0164]
gi|430445612|gb|ELA55342.1| MutS2 protein [Enterococcus faecium E0164]
Length = 786
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|69245126|ref|ZP_00603250.1| MutS 2 protein [Enterococcus faecium DO]
gi|257879660|ref|ZP_05659313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257890326|ref|ZP_05669979.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260559678|ref|ZP_05831858.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|293560080|ref|ZP_06676584.1| MutS2 family protein [Enterococcus faecium E1162]
gi|294614397|ref|ZP_06694313.1| MutS2 family protein [Enterococcus faecium E1636]
gi|314938141|ref|ZP_07845446.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|314943818|ref|ZP_07850553.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|314949777|ref|ZP_07853087.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|314951185|ref|ZP_07854243.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|314994416|ref|ZP_07859700.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|314995612|ref|ZP_07860706.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|383329426|ref|YP_005355310.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|389869286|ref|YP_006376709.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|415898673|ref|ZP_11551403.1| MutS2 family protein [Enterococcus faecium E4453]
gi|424789896|ref|ZP_18216506.1| MutS2 family protein [Enterococcus faecium V689]
gi|424912749|ref|ZP_18336124.1| MutS2 family protein [Enterococcus faecium R497]
gi|424955437|ref|ZP_18370273.1| MutS2 family protein [Enterococcus faecium R494]
gi|424964246|ref|ZP_18378359.1| MutS2 family protein [Enterococcus faecium P1190]
gi|424970080|ref|ZP_18383617.1| MutS2 family protein [Enterococcus faecium P1139]
gi|424974783|ref|ZP_18387998.1| MutS2 family protein [Enterococcus faecium P1137]
gi|424978200|ref|ZP_18391145.1| MutS2 family protein [Enterococcus faecium P1123]
gi|424980291|ref|ZP_18393093.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|424983595|ref|ZP_18396176.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|424987917|ref|ZP_18400268.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|424991796|ref|ZP_18403927.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|425007017|ref|ZP_18418168.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|425016051|ref|ZP_18426638.1| MutS2 family protein [Enterococcus faecium E417]
gi|425021060|ref|ZP_18431339.1| MutS2 family protein [Enterococcus faecium C497]
gi|425024153|ref|ZP_18434239.1| MutS2 family protein [Enterococcus faecium C1904]
gi|425035142|ref|ZP_18439993.1| MutS2 family protein [Enterococcus faecium 514]
gi|425039209|ref|ZP_18443767.1| MutS2 family protein [Enterococcus faecium 513]
gi|425041479|ref|ZP_18445872.1| MutS2 family protein [Enterococcus faecium 511]
gi|425046563|ref|ZP_18450570.1| MutS2 family protein [Enterococcus faecium 510]
gi|425049153|ref|ZP_18453021.1| MutS2 family protein [Enterococcus faecium 509]
gi|425060412|ref|ZP_18463707.1| MutS2 family protein [Enterococcus faecium 503]
gi|430831133|ref|ZP_19449186.1| MutS2 protein [Enterococcus faecium E0333]
gi|430852078|ref|ZP_19469813.1| MutS2 protein [Enterococcus faecium E1258]
gi|431003613|ref|ZP_19488711.1| MutS2 protein [Enterococcus faecium E1578]
gi|431251925|ref|ZP_19503983.1| MutS2 protein [Enterococcus faecium E1623]
gi|431755260|ref|ZP_19543914.1| MutS2 protein [Enterococcus faecium E2883]
gi|431771238|ref|ZP_19559624.1| MutS2 protein [Enterococcus faecium E1644]
gi|431772678|ref|ZP_19561016.1| MutS2 protein [Enterococcus faecium E2369]
gi|68195969|gb|EAN10402.1| MutS 2 protein [Enterococcus faecium DO]
gi|257813888|gb|EEV42646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257826686|gb|EEV53312.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260074346|gb|EEW62668.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|291592705|gb|EFF24298.1| MutS2 family protein [Enterococcus faecium E1636]
gi|291605947|gb|EFF35377.1| MutS2 family protein [Enterococcus faecium E1162]
gi|313590200|gb|EFR69045.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|313591188|gb|EFR70033.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|313596664|gb|EFR75509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|313597542|gb|EFR76387.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|313642488|gb|EFS07068.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|313643850|gb|EFS08430.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|364089863|gb|EHM32509.1| MutS2 family protein [Enterococcus faecium E4453]
gi|378939120|gb|AFC64192.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|388534535|gb|AFK59727.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|402921430|gb|EJX41876.1| MutS2 family protein [Enterococcus faecium V689]
gi|402927678|gb|EJX47618.1| MutS2 family protein [Enterococcus faecium R497]
gi|402934061|gb|EJX53454.1| MutS2 family protein [Enterococcus faecium R494]
gi|402947097|gb|EJX65327.1| MutS2 family protein [Enterococcus faecium P1190]
gi|402955532|gb|EJX73054.1| MutS2 family protein [Enterococcus faecium P1137]
gi|402962705|gb|EJX79623.1| MutS2 family protein [Enterococcus faecium P1139]
gi|402962932|gb|EJX79835.1| MutS2 family protein [Enterococcus faecium P1123]
gi|402966828|gb|EJX83433.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|402971214|gb|EJX87503.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|402973400|gb|EJX89529.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|402975823|gb|EJX91752.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|402993517|gb|EJY08117.1| MutS2 family protein [Enterococcus faecium E417]
gi|402995904|gb|EJY10320.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|403007752|gb|EJY21300.1| MutS2 family protein [Enterococcus faecium C497]
gi|403007864|gb|EJY21411.1| MutS2 family protein [Enterococcus faecium C1904]
gi|403017153|gb|EJY29929.1| MutS2 family protein [Enterococcus faecium 513]
gi|403018752|gb|EJY31412.1| MutS2 family protein [Enterococcus faecium 514]
gi|403024013|gb|EJY36210.1| MutS2 family protein [Enterococcus faecium 510]
gi|403025767|gb|EJY37812.1| MutS2 family protein [Enterococcus faecium 511]
gi|403028786|gb|EJY40587.1| MutS2 family protein [Enterococcus faecium 509]
gi|403042608|gb|EJY53554.1| MutS2 family protein [Enterococcus faecium 503]
gi|430482004|gb|ELA59145.1| MutS2 protein [Enterococcus faecium E0333]
gi|430542660|gb|ELA82768.1| MutS2 protein [Enterococcus faecium E1258]
gi|430561702|gb|ELB00956.1| MutS2 protein [Enterococcus faecium E1578]
gi|430578351|gb|ELB16903.1| MutS2 protein [Enterococcus faecium E1623]
gi|430617260|gb|ELB54134.1| MutS2 protein [Enterococcus faecium E2883]
gi|430633763|gb|ELB69917.1| MutS2 protein [Enterococcus faecium E1644]
gi|430637757|gb|ELB73756.1| MutS2 protein [Enterococcus faecium E2369]
Length = 786
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|410459253|ref|ZP_11313005.1| recombination and DNA strand exchange inhibitor protein [Bacillus
azotoformans LMG 9581]
gi|409930446|gb|EKN67445.1| recombination and DNA strand exchange inhibitor protein [Bacillus
azotoformans LMG 9581]
Length = 785
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 297/605 (49%), Gaps = 65/605 (10%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE K +T A +++ + + L I D+ L A G LS SE+ + T+
Sbjct: 40 FEEVVKWQEETDEAAKVLRLKGQVPLGGIFDVRPSLKRAQIGGDLSASELLDIASTIYGG 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ K EA DG L S +E L LT+LE KI CID + +D AS+ L
Sbjct: 100 RQI-KNFIEAMVEDGVELPILSSYIEQLTT---LTDLERKIKNCIDDHGHV-MDGASDKL 154
Query: 136 ----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+ +R+ R E L+++ + AQ + I IT R R + +K ++
Sbjct: 155 RSIRQTLRSAESRIREKLENMTRSSNAQKMLSDAI----ITIRNDRFVIPVKQEYRSAY- 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT F+EP+ VE NN E E IL LT +A+ + +
Sbjct: 210 GGIVHDQSASGATLFIEPQAVVELNNTLQEARAKEKQEVERILHELTLFVAEDAESMLHN 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ + EID FA+A F Q + P ++ + + + +HPL+
Sbjct: 270 VKILTEIDFMFAKASFGQKIKASMPKMNREGRIRLFKA------RHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
D++ VP DI + + +VITGPNTGGKT ++KTL
Sbjct: 313 ---------DIKQV---------------VPNDIILGEDYSAIVITGPNTGGKTVTLKTL 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H++ IV+IL+ V
Sbjct: 349 GLLTLMAQAGLQIPALDGSEMTVFSSVFADIGDEQSIEQSLSTFSSHMTNIVEILKQVDA 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SLVL DE+G+GTDP EG ALA +IL + +R V TTHY +L + NA+
Sbjct: 409 NSLVLFDELGAGTDPQEGAALAIAILDDVYNRGAKVVATTHYPELKAYGYNRSGVINASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF +ETL PTYR+L G G SNA I+K +G + +I+ A+ V ++ ++ +
Sbjct: 469 EFDVETLSPTYRLLLGVPGRSNAFEISKRLGLSQHVIENAKGYV-----SQETNKVENMI 523
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVYRYQFAVTSTLSKVDFDAIPN 611
SL E +++ E + A + + L++E I+ Y + + L K + DA
Sbjct: 524 ASLEESKKQAEEEWSEAEDIRKDAEHLHQELQKQI-IAFYEERDKI---LEKAEEDAKEA 579
Query: 612 IDQCK 616
I++ K
Sbjct: 580 IEKAK 584
>gi|431374601|ref|ZP_19510289.1| MutS2 protein [Enterococcus faecium E1627]
gi|430583225|gb|ELB21614.1| MutS2 protein [Enterococcus faecium E1627]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|431514071|ref|ZP_19516119.1| MutS2 protein [Enterococcus faecium E1634]
gi|430586327|gb|ELB24588.1| MutS2 protein [Enterococcus faecium E1634]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|424819498|ref|ZP_18244589.1| MutS2 family protein [Enterococcus faecium R501]
gi|402926153|gb|EJX46215.1| MutS2 family protein [Enterococcus faecium R501]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|423511495|ref|ZP_17488026.1| MutS2 family protein [Bacillus cereus HuA2-1]
gi|402451109|gb|EJV82934.1| MutS2 family protein [Bacillus cereus HuA2-1]
Length = 633
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASWKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + FD + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRDHVLQRAKEYMANKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHDDFGIIYKERDNFYNVVVY 568
>gi|430847896|ref|ZP_19465729.1| MutS2 protein [Enterococcus faecium E1133]
gi|430849196|ref|ZP_19466977.1| MutS2 protein [Enterococcus faecium E1185]
gi|431748902|ref|ZP_19537654.1| MutS2 protein [Enterococcus faecium E2297]
gi|430536272|gb|ELA76648.1| MutS2 protein [Enterococcus faecium E1133]
gi|430538042|gb|ELA78341.1| MutS2 protein [Enterococcus faecium E1185]
gi|430612427|gb|ELB49467.1| MutS2 protein [Enterococcus faecium E2297]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|293553120|ref|ZP_06673758.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430822931|ref|ZP_19441506.1| MutS2 protein [Enterococcus faecium E0120]
gi|430838514|ref|ZP_19456460.1| MutS2 protein [Enterococcus faecium E0688]
gi|430857731|ref|ZP_19475364.1| MutS2 protein [Enterococcus faecium E1552]
gi|430865610|ref|ZP_19481245.1| MutS2 protein [Enterococcus faecium E1574]
gi|431742713|ref|ZP_19531597.1| MutS2 protein [Enterococcus faecium E2071]
gi|291602711|gb|EFF32925.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430442860|gb|ELA52881.1| MutS2 protein [Enterococcus faecium E0120]
gi|430491756|gb|ELA68208.1| MutS2 protein [Enterococcus faecium E0688]
gi|430546941|gb|ELA86883.1| MutS2 protein [Enterococcus faecium E1552]
gi|430552957|gb|ELA92674.1| MutS2 protein [Enterococcus faecium E1574]
gi|430607682|gb|ELB44983.1| MutS2 protein [Enterococcus faecium E2071]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|261208743|ref|ZP_05923180.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565573|ref|ZP_06446020.1| MutS2 protein [Enterococcus faecium D344SRF]
gi|260077245|gb|EEW64965.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162655|gb|EFD10508.1| MutS2 protein [Enterococcus faecium D344SRF]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|430946889|ref|ZP_19485669.1| MutS2 protein [Enterococcus faecium E1576]
gi|430558286|gb|ELA97705.1| MutS2 protein [Enterococcus faecium E1576]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|227485246|ref|ZP_03915562.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
gi|227236706|gb|EEI86721.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
Length = 781
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 256/516 (49%), Gaps = 60/516 (11%)
Query: 24 LNQTSA-ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T A A + ++ +D+ + D I+ +L PS++ + LR V + L
Sbjct: 47 LEKTGAMAKVIARNGNIDIFGLYDFKEIVGYIRRNGILEPSDLLKILGLLR----VSEYL 102
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL---IILDRASEDLELIR 139
+ ++ DS + L + + +FL E ID +L I D AS +L IR
Sbjct: 103 KDYSKNIDDSY--IADLFDRITTNDFLKE-------EIDRSILNEEDIADNASRELLAIR 153
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+R E + + L + +++ R R V IK + + ++ +GI + S
Sbjct: 154 RSLRRKEEEIKNKLNSYVTSSKYEDALQDKVVSVRDGRYVVPIKTNKRSVI-NGIVHDKS 212
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SG T F+EP VE NN L E AE IL L+ K + EI + ID
Sbjct: 213 ASGNTLFIEPSAIVELNNQYKDLELKEDAEIRRILDRLSRLAQKFDVEILENQKIIARID 272
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
A+A F D P L+ Q ++ S+I HPLL G
Sbjct: 273 FLQAKAKFGLENDYSLPKLNQQKIINIKSAI------HPLLPGK---------------- 310
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPID+ + + ++ITGPNTGGKT S+KT+GL +LM++
Sbjct: 311 --------------------VVPIDVAIGGDYTTLIITGPNTGGKTVSLKTVGLITLMAQ 350
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
L++PA + FD + DIGD QS+E +LSTFS ++ IVDIL V+ SLVL+DE
Sbjct: 351 TALFIPADEGSTVNVFDDVFLDIGDKQSIEMSLSTFSASLTNIVDILNRVTSNSLVLLDE 410
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
IGSGTDP EG ALA SIL +L ++ + TTHY++L ++ R NA+ EF++ TL
Sbjct: 411 IGSGTDPIEGAALAISILSHLTEKEVMTFATTHYSELKYYAMENNRVMNASVEFNVNTLS 470
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
PTY++ G+ G SNA I+K +G +I+++A+ L+
Sbjct: 471 PTYKLEIGTPGKSNAFEISKRLGLSEEILKKAKDLI 506
>gi|255101281|ref|ZP_05330258.1| DNA mismatch repair protein [Clostridium difficile QCD-63q42]
Length = 636
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + + ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E + YSP L N +E++I +CI + AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154
Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
RN+E + L K I + +I+KR R + IK+S+K + +G
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ SS G T F+EP + L E EE ILS LT I + +IK ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+D ++ R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|293568794|ref|ZP_06680108.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430819495|ref|ZP_19438147.1| MutS2 protein [Enterococcus faecium E0045]
gi|430834320|ref|ZP_19452327.1| MutS2 protein [Enterococcus faecium E0679]
gi|431149562|ref|ZP_19499420.1| MutS2 protein [Enterococcus faecium E1620]
gi|431230237|ref|ZP_19502440.1| MutS2 protein [Enterococcus faecium E1622]
gi|431301457|ref|ZP_19507776.1| MutS2 protein [Enterococcus faecium E1626]
gi|431764575|ref|ZP_19553112.1| MutS2 protein [Enterococcus faecium E4215]
gi|291588511|gb|EFF20345.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430440567|gb|ELA50814.1| MutS2 protein [Enterococcus faecium E0045]
gi|430485551|gb|ELA62457.1| MutS2 protein [Enterococcus faecium E0679]
gi|430574223|gb|ELB13001.1| MutS2 protein [Enterococcus faecium E1622]
gi|430575451|gb|ELB14167.1| MutS2 protein [Enterococcus faecium E1620]
gi|430580647|gb|ELB19114.1| MutS2 protein [Enterococcus faecium E1626]
gi|430630715|gb|ELB67064.1| MutS2 protein [Enterococcus faecium E4215]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|228916099|ref|ZP_04079670.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228843571|gb|EEM88648.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 633
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ VS+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEVSAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|430860620|ref|ZP_19478219.1| MutS2 protein [Enterococcus faecium E1573]
gi|430552018|gb|ELA91768.1| MutS2 protein [Enterococcus faecium E1573]
Length = 786
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|373465637|ref|ZP_09557092.1| MutS2 family protein [Lactobacillus kisonensis F0435]
gi|371759887|gb|EHO48594.1| MutS2 family protein [Lactobacillus kisonensis F0435]
Length = 787
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 213/410 (51%), Gaps = 43/410 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS +L IR R ++ + + K + A + +P+IT R R + I+A +
Sbjct: 147 VLDSASSELRAIRKSISRTQTDIRTKMGKFI-KGSDAKYLSEPIITVRDDRFVLPIRADY 205
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K GI + S+SG T ++EP VE NN R +E AE IL LT +
Sbjct: 206 KQHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEVRRILGELTNLLRPYRN 264
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ M+ V ++D A+A +A + P +S D+ +N+ +HP++
Sbjct: 265 ELMTNMNLVGQLDFVNAKAKYAHQTGSIQP------RISKDNVVNLRKARHPMI------ 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
D V DI++ + +++TGPNTGGKT
Sbjct: 313 -----------------------------DRDKVVANDIEIGDKYSTIIVTGPNTGGKTI 343
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
+MKT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I+ +L
Sbjct: 344 TMKTIGLLQLMGQSGLFITANEDSQIGAFDEVFADIGDEQSIEANLSTFSSHMDNIISML 403
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +S SLVL+DE+G+GTDP EG ALA +I+ + + TTHY +L +
Sbjct: 404 DKISNNSLVLLDELGAGTDPKEGAALAMAIIDAIHATGCELIATTHYPELKAFAYNRSGI 463
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ EF + TLRPTYR L G G SNALNIA+ +GF ++II A+ +
Sbjct: 464 INASMEFDVNTLRPTYRFLMGIPGQSNALNIAQKLGFPKQIIDNARSFTD 513
>gi|126650698|ref|ZP_01722914.1| DNA mismatch repair protein [Bacillus sp. B14905]
gi|126592363|gb|EAZ86381.1| DNA mismatch repair protein [Bacillus sp. B14905]
Length = 634
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/574 (29%), Positives = 276/574 (48%), Gaps = 58/574 (10%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + + +I I+ G +L PSE+ ++ LR N+ KK
Sbjct: 47 LNETTEARVIVDAEGHVPFLGVSNIEHIMTKLAKGMILDPSELISMSDFLRGCRNI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I + AS +L+ IR
Sbjct: 106 MLDKEFFAPVLSSYASSMAEFKS------VEEEINFAIKANR--VDSAASRELKRIRHHI 157
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ E + L K I + I+++ R + IKAS+K + G + +SS G
Sbjct: 158 ETTEEKIKDRLTKFLNNSANKTYIQEFFISQKDERYTIPIKASYKNHV-QGTIVEISSKG 216
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
AT FMEP + N L E EE IL+ L+ + + M+ + + D+ F
Sbjct: 217 ATVFMEPSVVAKLNGELATLKAEEAVEEYQILASLSGLLMDHLHALHINMELISQYDMVF 276
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A F++ + G+ P L+ + I G +HPLL G++
Sbjct: 277 AKAKFSKQIGGMEPRLNDYGFIQV-----ING-RHPLLSGNA------------------ 312
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VP+ + + R ++ITGPN GGKT +KT+GL +L + +G
Sbjct: 313 ------------------VPLQFTIGKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++ A L FD I DIGD+QS+E LSTFS H+ + DI+ + +L+L DEIGS
Sbjct: 355 HIVADEGTELAIFDHIFVDIGDNQSMENALSTFSSHMKNLSDIMRASNNHTLLLFDEIGS 414
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA +IL+ + V TTHY ++ + F NAA F+ ETL P Y
Sbjct: 415 GTEPNEGAALAIAILEEFYQMGCMTVATTHYGEIKRFSEMHPDFMNAAMRFNSETLEPLY 474
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQ-----KLVERLRPERQQHRKSELYQSLMEE 557
+++ G++G+SNAL I+K + +++QRAQ K + R + + RK ++ ++
Sbjct: 475 QLMIGTSGESNALWISKKMNVRAEVLQRAQDYMNNKDYQLTRVQDSKIRKPKVEKAGRAA 534
Query: 558 RRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
K R H ++ +Y+E + +++VY
Sbjct: 535 IVKFAKGDRVKLLDHDDVGLVYQEMNQFYNVTVY 568
>gi|402556385|ref|YP_006597656.1| MutS family protein [Bacillus cereus FRI-35]
gi|401797595|gb|AFQ11454.1| MutS family protein [Bacillus cereus FRI-35]
Length = 633
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNR--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLL--------------- 308
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
S+ VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 309 ---------------------SEKVVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ I DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKDTEIAIFENIFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA+ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKAYMENKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKRENHYEYKIGDRVNLLDYDDFGIIYKEIDNFYNVVVY 568
>gi|294617527|ref|ZP_06697157.1| MutS2 family protein [Enterococcus faecium E1679]
gi|291596133|gb|EFF27396.1| MutS2 family protein [Enterococcus faecium E1679]
Length = 786
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|228922193|ref|ZP_04085501.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837437|gb|EEM82770.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 633
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 293/583 (50%), Gaps = 76/583 (13%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ + + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDKYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + +++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------MHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMSMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++QRA+ +E ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRARAYMENKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD------LYREDSTSASISVY 591
M+E+R+ + + ++ I+D +Y+E ++ VY
Sbjct: 528 MQEKRENHYEYKIGDRVN--ILDYDDFGIIYKEIDNFYNVVVY 568
>gi|228966365|ref|ZP_04127419.1| DNA mismatch repair protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|402559246|ref|YP_006601970.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-771]
gi|228793294|gb|EEM40843.1| DNA mismatch repair protein [Bacillus thuringiensis serovar sotto
str. T04001]
gi|401787898|gb|AFQ13937.1| DNA mismatch repair protein mutS [Bacillus thuringiensis HD-771]
Length = 633
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 270/528 (51%), Gaps = 67/528 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL+ + LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR
Sbjct: 39 SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ K + + + ++P+L N +TE +EE+I F I + + A
Sbjct: 99 CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 146
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHK 187
S++L+ IR N++++D +K+ + + I + I+K+ R + IK+S+K
Sbjct: 147 SKELKRIR----NNIDSVDGKIKERLMKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ I + S+ G+T F+EP + N L E EE IL+ L+ + ++
Sbjct: 203 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
IK M+ + + D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 262 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV--- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+ K+ E R ++ITGPN GGKT
Sbjct: 313 ---------------------------------VPLHFKIGQEYRSLIITGPNAGGKTIV 339
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+
Sbjct: 340 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 399
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ + +L+L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F
Sbjct: 400 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 459
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NAA +F+ ETL P Y+++ G +G+SNAL IA + +++RA++ +
Sbjct: 460 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507
>gi|196038503|ref|ZP_03105812.1| putative MutS family protein [Bacillus cereus NVH0597-99]
gi|196030911|gb|EDX69509.1| putative MutS family protein [Bacillus cereus NVH0597-99]
Length = 633
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 288/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLMKFLNSSANKKYIQDFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|430843631|ref|ZP_19461530.1| MutS2 protein [Enterococcus faecium E1050]
gi|430497490|gb|ELA73527.1| MutS2 protein [Enterococcus faecium E1050]
Length = 786
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|427396578|ref|ZP_18889337.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|431638661|ref|ZP_19523288.1| MutS2 protein [Enterococcus faecium E1904]
gi|447912185|ref|YP_007393597.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
gi|425723248|gb|EKU86139.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|430602140|gb|ELB39719.1| MutS2 protein [Enterococcus faecium E1904]
gi|445187894|gb|AGE29536.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
Length = 786
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|430855305|ref|ZP_19473014.1| MutS2 protein [Enterococcus faecium E1392]
gi|430547311|gb|ELA87247.1| MutS2 protein [Enterococcus faecium E1392]
Length = 786
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|431414518|ref|ZP_19512337.1| MutS2 protein [Enterococcus faecium E1630]
gi|431759732|ref|ZP_19548343.1| MutS2 protein [Enterococcus faecium E3346]
gi|430589251|gb|ELB27396.1| MutS2 protein [Enterococcus faecium E1630]
gi|430625913|gb|ELB62516.1| MutS2 protein [Enterococcus faecium E3346]
Length = 786
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGVVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|218904620|ref|YP_002452454.1| putative MutS family protein [Bacillus cereus AH820]
gi|218537701|gb|ACK90099.1| putative MutS family protein [Bacillus cereus AH820]
Length = 633
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 288/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS+ L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKGLKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ H I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGH------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|260584040|ref|ZP_05851788.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
gi|260158666|gb|EEW93734.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
Length = 785
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 277/538 (51%), Gaps = 71/538 (13%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILN-----SAVSGQLLSPS 63
Q+P + ++ + + +T A+ +++ Q + + +EDI+ + + ++G+ LS
Sbjct: 33 QLPIETNAKKIRHKIEETRDAVTLLRLKQGIPIPKLEDISVSIKRLEVEAGLNGRELS-- 90
Query: 64 EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCK 123
EI V +T V N ++K+ E E+ D L +L++ +L E+ +++ I
Sbjct: 91 EILKVLQTTNQVANFFEKVKEE-EITLDRLP------QLVEKLEYLPEISKQLQLSIRED 143
Query: 124 LLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
+ LD AS L+ IR R + + L + A + LIT R R V +K
Sbjct: 144 GYV-LDDASIPLKGIRQGISRTEQEIKGQLDTYVTGKY-AKYLTDSLITIRNDRYVVPVK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A +K GI + S++G T FMEP+ V NN +L + ++ E+ + +L K
Sbjct: 202 AEYKSTF-GGIVHDQSATGQTLFMEPQAIVNLNN---KLRDYQLQEKKEVERILLELSEK 257
Query: 244 ------SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
S + Y++ R +D+A A+A +A+ + PI+ ++HV+ I +H
Sbjct: 258 LMPHTPSLTQNHYVLSR---LDIANAKALYAKQIKANEPIIDEENHVA------IWQARH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PL+ +P KS V N DI + E + +VIT
Sbjct: 309 PLI---------------SP-KSVVAN-------------------DIILGQEYQSIVIT 333
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT +KT+G+ LM++ GLY+PA R+ F I ADIGD QS+EQNLSTFS
Sbjct: 334 GPNTGGKTILLKTIGIIQLMAQMGLYIPALPDSRVGVFTQIFADIGDEQSIEQNLSTFSS 393
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H+S IV IL + +SLVL+DEIGSGTDP EG +LA +IL Y+ + + TTHY +L
Sbjct: 394 HMSNIVSILNKIDEKSLVLMDEIGSGTDPQEGASLAIAILDYIGTKQSYVIATTHYPELK 453
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF +TL+PTYR L G G SNA +I+ +G + +I++A++ +
Sbjct: 454 VYGYNRVGTINASMEFDSDTLQPTYRFLLGVPGRSNAFDISARLGLPKVVIEQARQFI 511
>gi|229012685|ref|ZP_04169855.1| DNA mismatch repair protein [Bacillus mycoides DSM 2048]
gi|423661654|ref|ZP_17636823.1| MutS2 family protein [Bacillus cereus VDM022]
gi|228748520|gb|EEL98375.1| DNA mismatch repair protein [Bacillus mycoides DSM 2048]
gi|401300027|gb|EJS05622.1| MutS2 family protein [Bacillus cereus VDM022]
Length = 633
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 289/578 (50%), Gaps = 66/578 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + KK
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 106 MLDKEFFAPVLSSYANSMSEFKS------IEEEINFSIKGNG--IDAAASKELKRIR--- 154
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N++++D +K+ + + I + I+K+ R + IK+++K + I +
Sbjct: 155 -NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI-VEA 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ + +
Sbjct: 213 SAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELISQY 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 273 DMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK--------------- 311
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP++ ++ R ++ITGPN GGKT +KT+GL +L +
Sbjct: 312 ---------------------IVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLTLAT 350
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + FD + DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 351 MSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLLLFD 410
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+ ETL
Sbjct: 411 EIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNSETL 470
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SLMEE 557
P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ + +++E
Sbjct: 471 EPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKMVQE 530
Query: 558 RRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
+R+ + + + + H + +Y+E ++ VY
Sbjct: 531 KRENDYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|423581676|ref|ZP_17557787.1| MutS2 family protein [Bacillus cereus VD014]
gi|423635812|ref|ZP_17611465.1| MutS2 family protein [Bacillus cereus VD156]
gi|401214751|gb|EJR21474.1| MutS2 family protein [Bacillus cereus VD014]
gi|401276643|gb|EJR82591.1| MutS2 family protein [Bacillus cereus VD156]
Length = 633
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSSNKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ ++G+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSINGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMSMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLTGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREFHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|430835419|ref|ZP_19453409.1| MutS2 protein [Enterococcus faecium E0680]
gi|430489410|gb|ELA66024.1| MutS2 protein [Enterococcus faecium E0680]
Length = 786
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVRAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|419858984|ref|ZP_14381641.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497345|gb|EKP88819.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 795
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 288/553 (52%), Gaps = 58/553 (10%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ +
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105
Query: 82 L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ T E+ ++L++ +L ++ + L +++ +D + +LD ASE+L IR
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ + S
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
V DI++ + ++ITGPNTGGKT +KTLGL LM++
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532
Query: 561 L---ESQARTAAS 570
L ES+ R S
Sbjct: 533 LSKEESELRNQLS 545
>gi|229104018|ref|ZP_04234694.1| DNA mismatch repair protein [Bacillus cereus Rock3-28]
gi|228679362|gb|EEL33563.1| DNA mismatch repair protein [Bacillus cereus Rock3-28]
Length = 633
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 164/583 (28%), Positives = 286/583 (49%), Gaps = 76/583 (13%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARTILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGN------IHLMNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ K+ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFKIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +G ++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGFHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS 548
ETL P Y+++ G +G+SNAL IA + ++QRA++ +E++ + RK
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKI--RKP 525
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
+ Q+ E + + R + + LY+E ++ VY
Sbjct: 526 KFVQAKRESHYEYKVGDRVNLLDYDDFGILYKEKDNFYNVVVY 568
>gi|406580064|ref|ZP_11055285.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|406584557|ref|ZP_11059584.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|406590812|ref|ZP_11065162.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410936712|ref|ZP_11368575.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
gi|404454651|gb|EKA01563.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|404463909|gb|EKA09484.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|404468826|gb|EKA13702.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410734742|gb|EKQ76660.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
Length = 786
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 222/416 (53%), Gaps = 57/416 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KHEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM 511
>gi|218898540|ref|YP_002446951.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
gi|218543674|gb|ACK96068.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
Length = 572
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 269/528 (50%), Gaps = 67/528 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL+ + LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR
Sbjct: 39 SLKVVRNRLNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ K + + + ++P+L N +TE +EE+I F I + + A
Sbjct: 99 CRKIKKFMLDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNSIDV--AA 146
Query: 132 SEDLELIRAERKRNMENLDSLLK----KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S++L+ IR N++++D +K K I I + I+K+ R + IK+S+K
Sbjct: 147 SKELKRIR----NNIDSVDGKIKERLMKFLNSIANKKFIQEFFISKKDDRYTIPIKSSYK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ I + S+ G+T F+EP + N L E EE IL+ L+ + ++
Sbjct: 203 NQVAGSI-IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYS 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
IK M+ + + D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 262 IKINMELISQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV--- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+ K+ E R ++ITGPN GGKT
Sbjct: 313 ---------------------------------VPLHFKIGQEYRSLIITGPNAGGKTIV 339
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+
Sbjct: 340 LKTIGLLTLATMSGLHIAGDRGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMR 399
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ + +L+L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F
Sbjct: 400 MSNNNTLLLFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFM 459
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NAA +F+ ETL P Y+++ G +G+SNAL IA + +++RA++ +
Sbjct: 460 NAAMQFNSETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYM 507
>gi|311069349|ref|YP_003974272.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus 1942]
gi|419819994|ref|ZP_14343611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus C89]
gi|310869866|gb|ADP33341.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus 1942]
gi|388475847|gb|EIM12553.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus C89]
Length = 785
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 262/523 (50%), Gaps = 63/523 (12%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
K LEE +++ S+ + + P + DI L A G +LSP+E + L A
Sbjct: 45 KQLEE----VDEASSVIRLRGQAPF--GGVTDIRAALKRAEIGSVLSPAEFRDISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + L E DG + PLL + + L+ELE +I CID +LD ASE
Sbjct: 99 VKQMKNFLGSMYE-DGVEI----PLLNQYTEQLIGLSELEREINSCID-DYGEVLDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL LT A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRELTEHTAEHTHELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ P+++ + + + +HPLL
Sbjct: 268 QNLQVLQTLDFIFAKAKYAKASKATKPLINDRGFIRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P + V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PPEQVVAN-------------------DIELGGDFTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL ++M+++GL++PA+ F+ + ADIGD QS+EQ+LSTFS H+ IV ILE V
Sbjct: 347 TLGLLTVMAQSGLHIPAEEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILERV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDEVHHTNARVIATTHYPELKAYGYNRNGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF++ETL PTY++L G G SNA I++ +G II +A+
Sbjct: 467 SVEFNIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAK 509
>gi|423599206|ref|ZP_17575206.1| MutS2 family protein [Bacillus cereus VD078]
gi|401236190|gb|EJR42656.1| MutS2 family protein [Bacillus cereus VD078]
Length = 633
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 287/586 (48%), Gaps = 82/586 (13%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + KK
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 106 MLDKEFFAPVLSSYANSMSEFKS------IEEEINFSIKGNG--IDAAASKELKRIR--- 154
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N++++D +K+ + + I + I+K+ R + IK+++K + I +
Sbjct: 155 -NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI-VEA 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ + +
Sbjct: 213 SAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELISQY 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 273 DMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK--------------- 311
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP++ ++ R ++ITGPN GGKT +KT+GL +L +
Sbjct: 312 ---------------------IVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLTLAT 350
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + FD + DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 351 MSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLLLFD 410
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+ ETL
Sbjct: 411 EIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNSETL 470
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERL------RPERQQH 545
P Y+++ G +G+SNAL IA + ++QRA++ +E++ +P+ Q
Sbjct: 471 EPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYMGNKEYAIEKVNESKIRKPKMVQE 530
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
++ Y+ + +R KL H + +Y+E ++ VY
Sbjct: 531 KRENDYEYKIGDRVKLLD--------HNDFGIVYKEKDNFYNVVVY 568
>gi|424779902|ref|ZP_18206788.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
M35/04/3]
gi|422843441|gb|EKU27878.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
M35/04/3]
Length = 790
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 186/622 (29%), Positives = 294/622 (47%), Gaps = 80/622 (12%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE Q+ L QT A+ M++ + L + D L+ G + EI + L+
Sbjct: 40 EEVQQALEQTKEAMTMLRLGKELPFLALTDPRQSLSRIKIGASIQALEILNLGHILKNAA 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V +KL E E + + L L++ + L +I CI+ + + D A+E L
Sbjct: 100 QVLRKLEELEEEES-----FPELKALIQQLQPIPSLSGEIHRCINEQGQV-EDSATERL- 152
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDG 193
A+ +R + + ++ +++ + + +IT R R + +KA ++ G
Sbjct: 153 ---AQLRRQIRQCEQQIRGQLSEMIRGKNSRYLSDAVITMRSDRYVIPVKAEYRNQF-GG 208
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S++G T F+EPK VE NN ++ E E IL+ L EI +EI+
Sbjct: 209 MVHDQSATGQTLFIEPKAIVELNNRRQQMKVEEKEEVQRILAQLIQEIMPHRQEIQQNAY 268
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++D+ A+A A M P +S+ SF + +HPLL
Sbjct: 269 HLGQLDVIQAKAKLAAEMKACIPEMSTTQSFSFLQA------RHPLL------------- 309
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
NP + VP DI + E + ++ITGPNTGGKT ++KT+GL
Sbjct: 310 --NP--------------------ETVVPNDIYLGEEFQSLLITGPNTGGKTITLKTVGL 347
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM + G+ +P + FD I+ DIGD QS+EQ+LSTFSGH+ I+ IL+ V R S
Sbjct: 348 LQLMLQTGMAIPVAEESTMTIFDQIMVDIGDEQSIEQSLSTFSGHMKNIIQILDRVGRHS 407
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+G+GTDP EG ALA +IL L + L + TTHY +L + NA+ EF
Sbjct: 408 LVLLDELGAGTDPQEGAALAIAILNRLLQKGALTLCTTHYPELKVYAYNEPHTCNASMEF 467
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPER 542
++TL PTYR+L G+ G SNA I+ +G D +I A++ ++E+L R
Sbjct: 468 DVQTLSPTYRLLIGAPGSSNAFEISLRLGLDPTLITEAKENMDHQTGDLANMIEQLENAR 527
Query: 543 QQHRKSE-LYQSLMEERRKLESQARTA-ASLHAEIMDLYREDSTSASISVYRYQFAVTST 600
Q + + E + + E L+ + + A A+ E L +E A+
Sbjct: 528 QGYEEKEHAFTEKLSETEALQKELKEAFAAFKKEKAHLLKEAKKEAN-----------QV 576
Query: 601 LSKVDFDAIPNIDQCKDKGIHL 622
+ K +A I K+K HL
Sbjct: 577 VEKASVEAKEIIQDLKEKQEHL 598
>gi|399924139|ref|ZP_10781497.1| MutS2 family protein [Peptoniphilus rhinitidis 1-13]
Length = 790
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 297/595 (49%), Gaps = 74/595 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
I +E + LN+T+ AL ++ + +P L I DI I+ G LS S + V
Sbjct: 37 IEISTDFDEIKNRLNETNEALKLILSKGEP-QLFGIVDIKNIIKRVEIGGSLSASALLQV 95
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
LR + L + E + D + + + +L+++ +LE++I I + I
Sbjct: 96 SDFLRVSRGLKTYLKK--ESNSDESIKLNYIDKLIEDLYTEKKLEDEINSKIISEEEI-A 152
Query: 129 DRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS +L IR A++K +++N L+ +L QA + ++T R R V +K
Sbjct: 153 DDASRELLRIRRGIADKKNSIKNKLNGILNN------QANYLQDAIVTLRDGRYVVPVKI 206
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K + G+ ++SSSG T ++EP VE NN L E AE IL L+ +A+S
Sbjct: 207 ENKSRVR-GLVHDISSSGQTAYIEPMSVVEANNELKELYIKENAEIEKILRELSELVAES 265
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK D+++E+D FA+A P ++ D IN+ HP L
Sbjct: 266 SEYIKSNQDKLIELDFIFAKARLGIKYHANMP------KINKDGRINLIRAYHPFL---- 315
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+ I+ VPIDI + + ++ITGPNTGGK
Sbjct: 316 ----------------------------DRKIA---VPIDINLGIDFSSLIITGPNTGGK 344
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KT+GL SLM++ GL +P + + F+ + ADIGD QS+EQ+LSTFS H+ IV
Sbjct: 345 TVSLKTVGLLSLMTQYGLLIPCEESSEIAIFEKVFADIGDEQSIEQSLSTFSSHMVNIVY 404
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
L+ V++ SLVL DE+G+GTDP+EG ALA +I++ + R + TTHY L
Sbjct: 405 TLKNVTKNSLVLFDELGAGTDPTEGAALARAIMESMLKRNIRCISTTHYNQLKVFALTTD 464
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL---------- 534
NA+ EF +++L PTYR+L G G SNA I++ +G +II+ ++KL
Sbjct: 465 GVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPNEIIEESKKLLSSENIEFED 524
Query: 535 -VERLRPERQQHR--KSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREDS 583
++ + +R + R K EL + L E +KLE + R +I++ RE++
Sbjct: 525 VLQSIDKDRTKIREYKEELEREKRDLEIENKKLEGKIRNLEDQREKILEKSREEA 579
>gi|342216985|ref|ZP_08709632.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587875|gb|EGS31275.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 786
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 195/366 (53%), Gaps = 42/366 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
L+T R R + +K +K + G+ + SSSGAT F+EP VE NN L N E E
Sbjct: 184 LVTIRAGRYVIPVKQENKSSI-KGLIHDTSSSGATVFIEPLAVVELNNQLRELENKERQE 242
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL L+ ++A++ +K ++E+D FA+ A + P +S + + D
Sbjct: 243 IHRILQELSDQLAENLPALKQNNYAMVELDFIFAKGRLALEEKAIKPRISQEKKLKIDQG 302
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+HPLL +P K VPID+ +
Sbjct: 303 ------RHPLL---------------DPRKV--------------------VPIDLDLGY 321
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
E + ++ITGPNTGGKT S+KT GL LM++AGL++PA + +P I ADIGD QS+E
Sbjct: 322 EFKSLIITGPNTGGKTVSLKTTGLLILMAQAGLFVPAGPNTVIPLVHEIYADIGDEQSIE 381
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFS H+ IVDIL ++ + LVL DE+G+GTDP+EG ALA +I+ +R+R L +
Sbjct: 382 QNLSTFSSHMVNIVDILSKITDQDLVLFDELGAGTDPTEGAALAMTIIDKMRERGILTMA 441
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY L + NA EF LETL PTY + G+ G SNA I++ +G IQ
Sbjct: 442 TTHYNQLKVYALETPGVANAGMEFDLETLSPTYHLRIGTPGKSNAFEISRRLGLGEDYIQ 501
Query: 530 RAQKLV 535
A+ +
Sbjct: 502 AAKSFI 507
>gi|168335130|ref|ZP_02693238.1| DNA mismatch repair protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 626
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 257/512 (50%), Gaps = 57/512 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
QK L++T A++++ + + L + +I I+ G +L S + + L V V
Sbjct: 44 QKRLDETKEAISLL-ANTIPLQGVGNIQNIIEQVEKGIVLDCSNLVQISDFLYGVRKVIN 102
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + Y+P+L K+ L +E+ I I + I AS++L+ IR
Sbjct: 103 FFADK--------EAYTPILASYSKSLTALKNIEDDINQSITKGRVDI--NASKELKRIR 152
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
++ L+K ++ +ITKR+ R + +KA++K + G ++ S
Sbjct: 153 RHIDIEQSKIEEKLQKFIT--INKKYLESTIITKRQDRFTIQVKAAYKNQVT-GTQIDKS 209
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+ G T F+EP+ + + + L E EE IL++LT + +EIK ++ + E D
Sbjct: 210 NKGNTIFIEPQIIQKHTSALISLKAEEELEEYKILAMLTEIVNSKLQEIKLNVEVIAEYD 269
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
L FA+ +A +D P ++ D I KHPLL G+
Sbjct: 270 LIFAKGKYAIAIDAAMP------KINVDGYTKIIAGKHPLLEGNV--------------- 308
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
+P+D+++ + ITGPN GGKT +KT+GL ++M++
Sbjct: 309 ---------------------IPLDLEIGDTYSALAITGPNAGGKTVVLKTVGLLTIMTQ 347
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
GL++PAK++ + + I DIGD+QSLE +LSTFS HI + I++ +++LVL+DE
Sbjct: 348 LGLFIPAKDNSHIAIYSKIFVDIGDNQSLENSLSTFSSHIKNLATIIKQADKQTLVLLDE 407
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+GSGTDP+EG ALA +IL+ L + +VTTHY ++ F A EF+ ETL
Sbjct: 408 LGSGTDPNEGAALAIAILEELYKKQTTIIVTTHYGEIKNYSKSHPDFNTAKMEFNEETLE 467
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
P Y+++ G +G SNAL I++ +G +I+RA
Sbjct: 468 PLYKLVIGKSGKSNALYISQKMGVPNHVIERA 499
>gi|423390295|ref|ZP_17367521.1| MutS2 family protein [Bacillus cereus BAG1X1-3]
gi|401640673|gb|EJS58404.1| MutS2 family protein [Bacillus cereus BAG1X1-3]
Length = 633
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 293/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSTNKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++QRA++ +E ++ +S++ + +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRAKEYMENKEYALEKVNESKIRKPKM 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKRENHYEYKIGDRVNLLDYDDFGIIYKEIDNFYNVVVY 568
>gi|423488604|ref|ZP_17465286.1| MutS2 family protein [Bacillus cereus BtB2-4]
gi|423494329|ref|ZP_17470973.1| MutS2 family protein [Bacillus cereus CER057]
gi|423498881|ref|ZP_17475498.1| MutS2 family protein [Bacillus cereus CER074]
gi|401151943|gb|EJQ59384.1| MutS2 family protein [Bacillus cereus CER057]
gi|401158963|gb|EJQ66352.1| MutS2 family protein [Bacillus cereus CER074]
gi|402433611|gb|EJV65661.1| MutS2 family protein [Bacillus cereus BtB2-4]
Length = 633
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 288/578 (49%), Gaps = 66/578 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + KK
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 106 MLDKEFFAPVLASYANSMSEFKS------IEEEINFSIKGNG--IDAAASKELKRIR--- 154
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N++++D +K+ + + I + I+K+ R + IK+++K + I +
Sbjct: 155 -NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI-VEA 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ + +
Sbjct: 213 SAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELISQY 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 273 DMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK--------------- 311
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP++ ++ R ++ITGPN GGKT +KT+GL +L +
Sbjct: 312 ---------------------IVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLTLAT 350
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + FD + DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 351 MSGLHIAGDKETEIAIFDNVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLLLFD 410
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+ ETL
Sbjct: 411 EIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNSETL 470
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SLMEE 557
P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ + ++E
Sbjct: 471 EPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKFVQE 530
Query: 558 RRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
+R+ + + + + H + +Y+E ++ VY
Sbjct: 531 KRENDYEYKIGDRVNLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|417962044|ref|ZP_12604329.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-2]
gi|380331334|gb|EIA22399.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-2]
Length = 706
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 218/409 (53%), Gaps = 44/409 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +
Sbjct: 64 ISDFASDNLFKIRKELKSKTASIKRKLSEILKTYSKY--LQENVFTVRGDRYCIPVKSEY 121
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K + GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 122 KSQIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSID 180
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
I + + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 181 NIYLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN----- 229
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+ DV VP+++ + + ++ITGPNTGGKT
Sbjct: 230 ------------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTV 259
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ +
Sbjct: 260 TLKTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMT 319
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ + ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L
Sbjct: 320 DNIKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNV 379
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ENA+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK +
Sbjct: 380 ENASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKYL 428
>gi|381211900|ref|ZP_09918971.1| DNA mismatch repair protein [Lentibacillus sp. Grbi]
Length = 780
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 244/503 (48%), Gaps = 68/503 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYS 97
L + DI + +V G +L+ E V TL R N K+ E
Sbjct: 65 LGGVADIRAAVKRSVIGGVLTAGECLDVASTLYGGRQAKNFLGKMEEDL----------- 113
Query: 98 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 152
P+L+ L + L +LE I CID + + +D AS L IR+ R + LDS
Sbjct: 114 PILKGLAEKIISLRKLETDINSCIDDRGNV-MDSASVKLRSIRSSIRTYESRVRDKLDSY 172
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
K Q+ + +IT R R + +K ++ + GI + S+SGAT FMEPK
Sbjct: 173 TKS------QSKMLSDAIITIRNDRYVLPVKQEYRGAI-GGIVHDQSASGATLFMEPKAV 225
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
V+ NN +E E IL L+ +IA E + + + +ID ARA + M
Sbjct: 226 VDLNNQLQEAKVNEKKEIERILRELSGKIADDEAILTENVTVLAKIDFITARAKLGRGMK 285
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P ++ + IN++ +HPL+ P
Sbjct: 286 AAMPAIND------NGIINVKQARHPLI----------------P--------------- 308
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
D V D+ + + +VITGPNTGGKT ++K +GL +LM+++GL +PA + +
Sbjct: 309 ----DDEVVSNDVVLGKDYTSIVITGPNTGGKTVTLKMIGLFTLMAQSGLQIPAADGCEM 364
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
FD + ADIGD QS+EQNLSTFS H+ IV IL + +SLVL DE+G+GTDP EG AL
Sbjct: 365 AVFDDVFADIGDEQSIEQNLSTFSSHMINIVSILSGIDDKSLVLFDELGAGTDPQEGAAL 424
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A SIL + R V TTHY +L NA+ EF +ETL+PTYR+L G G S
Sbjct: 425 AMSILDDVVSRGARVVATTHYPELKAYGFNRDNVINASVEFDVETLQPTYRLLIGVPGRS 484
Query: 513 NALNIAKSIGFDRKIIQRAQKLV 535
NA IA +G + II RA+ V
Sbjct: 485 NAFEIAGRLGLAQSIIDRAKNQV 507
>gi|319652329|ref|ZP_08006446.1| DNA mismatch repair protein MutS domain-containing protein
[Bacillus sp. 2_A_57_CT2]
gi|317395990|gb|EFV76711.1| DNA mismatch repair protein MutS domain-containing protein
[Bacillus sp. 2_A_57_CT2]
Length = 650
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 272/555 (49%), Gaps = 60/555 (10%)
Query: 24 LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+TS A ++ ++ L L+ I +I + G +L+PSE+ AV LR + KK
Sbjct: 63 LNETSEARRLLDAEKHLPLTGISNITSHIEKLEKGIILTPSELNAVSDFLRGCRKI-KKF 121
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + +N +EE+I + I + + AS++L+ IR
Sbjct: 122 MADKEFFAPVLYTYALSMTEFRN------IEEEILYAIKGNM--VDSGASKELKRIRNHI 173
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ ++ L K I + I+K+ R + IKAS K + G + SS G
Sbjct: 174 AKTEGKIEERLNKFLRSGANKEYIQEFYISKKDDRFTIPIKASFKNQVA-GTVIQTSSKG 232
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP + N L + E EE IL+ L+ I +S EI+ ++ + + D+ F
Sbjct: 233 STVFIEPDAVSKLNVELAMLKSEESVEEYQILATLSGAILESIHEIRINIECISQYDMIF 292
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A +++ D + P +++ ++ SS KHPLL G+
Sbjct: 293 AKAKYSKSTDAIEPEINNHGYIKLVSS------KHPLLEGT------------------- 327
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VP+D ++ + R +VITGPN GGKT +KT+G+ +L +G
Sbjct: 328 -----------------IVPLDFEIGKDYRSLVITGPNAGGKTVVLKTIGILTLAVMSGF 370
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++ AK + FD + DIGD+QS+E LSTFS H+ I +++ + +L+L DEIGS
Sbjct: 371 HIMAKPGSEIAIFDHVFVDIGDNQSIENALSTFSSHMKNISEVMSASTNNTLLLFDEIGS 430
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA +IL+ + V TTHY ++ + F NAA F L+P Y
Sbjct: 431 GTEPNEGAALAIAILEEFYHMGCITVATTHYGEIKRYSEMHDDFMNAAMLFDSAELKPMY 490
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
++L G +G+SNAL I++ + +++RAQ +E + R++ + + ++E + +E
Sbjct: 491 KLLIGESGESNALWISRKMNIREHVLKRAQMYIENKDYNLEAVRENRIKKPVIEVTQNIE 550
Query: 563 SQARTAASLHAEIMD 577
H EI D
Sbjct: 551 -------EYHYEIGD 558
>gi|229162330|ref|ZP_04290295.1| DNA mismatch repair protein [Bacillus cereus R309803]
gi|228621130|gb|EEK77991.1| DNA mismatch repair protein [Bacillus cereus R309803]
Length = 633
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 287/578 (49%), Gaps = 66/578 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + KK
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 106 MLDKEFFAPVLASYANSMSEFKS------IEEEINFSIKGNS--IDAAASKELKRIR--- 154
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N++ +D +K+ + I + I+K+ R + IK+++K + I +
Sbjct: 155 -NNIDAVDGKIKERLTKFLNNSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI-VEA 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ + +
Sbjct: 213 SAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVLENIYSIKINMELISQY 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ +DG+ P L+ + I++ KHPLL GS
Sbjct: 273 DMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGSV-------------- 312
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP++ ++ E R ++ITGPN GGKT +KT+GL +L +
Sbjct: 313 ----------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLTLAT 350
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 351 MSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLLLFD 410
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+ ETL
Sbjct: 411 EIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHEDFMNAAMQFNSETL 470
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SLMEE 557
P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ + ++E
Sbjct: 471 EPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKFVQE 530
Query: 558 RRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
+R+ + + + H + +Y+E ++ VY
Sbjct: 531 KREKHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|350267033|ref|YP_004878340.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349599920|gb|AEP87708.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 785
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 186/572 (32%), Positives = 286/572 (50%), Gaps = 63/572 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSPSE + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL++ + L++LE I CID + LD ASE
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIQQHTEQLITLSDLERDINSCIDDHGEV-LDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEQTAEHTEELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ + PI++ V + +HPLL
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKPIMNDNGFVRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IV ILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTHARVLATTHYPELKAYGYNREGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ SL + +++ E + S+ E L++E
Sbjct: 522 MIASLEQSKKRAEEELSETESIRKEAEKLHKE 553
>gi|443632188|ref|ZP_21116368.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443348303|gb|ELS62360.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 785
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 285/572 (49%), Gaps = 63/572 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSPSE + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL+ + + L++LE I CID + LD AS
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASG 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + K R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLKTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEHTAEHTEELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ + PI++ V + +HPLL
Sbjct: 268 QDLQVLQTLDFIFAKARYAKAVKATKPIVNDNGFVRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IVDILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVDILEHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ SL + +++ E + S+ E L++E
Sbjct: 522 MIASLEQSKKRAEEELSETESIRKEAEKLHKE 553
>gi|376267365|ref|YP_005120077.1| MutS2-like protein [Bacillus cereus F837/76]
gi|364513165|gb|AEW56564.1| Clostridial MutS2-related protein [Bacillus cereus F837/76]
Length = 633
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L++ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNNHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|332982288|ref|YP_004463729.1| MutS2 family protein [Mahella australiensis 50-1 BON]
gi|332699966|gb|AEE96907.1| MutS2 family protein [Mahella australiensis 50-1 BON]
Length = 784
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 251/498 (50%), Gaps = 57/498 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSE---ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L I D+ +N+A G L P E I +V +T R + + + E A+L D
Sbjct: 65 LEGIRDVKDSVNAAAVGATLRPKELLDIASVIKTARLMKG-YAQENENADLIAD------ 117
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + + + +E++I CI + I D E ++ R + N D L +
Sbjct: 118 ----LCYSLHSMKAVEDEIYRCILSEDEIADDATPELKDIRRHIAQANQRIRDKLNDIIH 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ +Q + P++T R R V IK + +G+ + S SGAT F+EP VE NN
Sbjct: 174 STQYQRM-LQDPIVTIRNGRYVVPIKQECRSSF-EGLIQDQSGSGATLFIEPMAVVEANN 231
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
E E IL+ + I + +I + + ++DL FA+ + M+ V P+
Sbjct: 232 DLRAYMLQEQEEIERILASFSHMIGQHSEDILNDLGILAQLDLIFAKGQLSIEMNAVRPL 291
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L+ + F + +HPL+ +P
Sbjct: 292 LTENDGIIFKRA------RHPLI---------------DP-------------------- 310
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
D VPID+++ + ++ITGPNTGGKT ++KT+GL +LM++AGL++PA ++ F
Sbjct: 311 DKVVPIDLELGRQFTQLIITGPNTGGKTVTLKTIGLLTLMAQAGLHVPAGIGTQIRIFTG 370
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LSTFS H++ IV IL SLVL+DE+G+GTDP+EG ALA +IL
Sbjct: 371 VYADIGDEQSIEQSLSTFSSHMTNIVHILNSADHRSLVLLDELGAGTDPTEGAALAMAIL 430
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
LR + + TTHY+ L K NA EF +ETLRPTYR++ G G SNA I
Sbjct: 431 DELRHKGAIVAATTHYSQLKAYALKTPGVINAGMEFDVETLRPTYRLIVGVPGKSNAFII 490
Query: 518 AKSIGFDRKIIQRAQKLV 535
++ +G +++ RAQ L+
Sbjct: 491 SRKLGLSDEVLARAQALL 508
>gi|56965776|ref|YP_177510.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
gi|56912022|dbj|BAD66549.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
Length = 645
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 222/430 (51%), Gaps = 53/430 (12%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AG 164
L LEE++G CI +L + D AS DL +R R ++ + + LK A Q+ A
Sbjct: 126 LHALEERLGACI--RLGQVDDHASSDLAYVR----RQLQIIQTKLKDKAQQLVNNKRYAP 179
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ I R ++ + +K + + +G ++ SSSGAT F+EP + L
Sbjct: 180 YLQDKTIVDRGGKLALAVKKEFRTKV-EGTVIDQSSSGATLFIEPTALGDIQEERALLQI 238
Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
+E AE IL LT + E EI ++ + D+ FA+A + +D P L+
Sbjct: 239 AEEAEVERILYELTEMVLNHETEIHIAIETMHHYDVLFAKAKYCASIDAAVPTLNE---- 294
Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
+ I++ +HP L GS VP+
Sbjct: 295 --EYRIDLRNARHPKL-GSK-----------------------------------AVPLS 316
Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
IKV+ R +VITGPNTGGKT ++KT+GL +LM+++G+ +PA+ + F + DIGD
Sbjct: 317 IKVDEHERALVITGPNTGGKTVTLKTVGLLTLMAQSGVPIPAEPESSIAIFRQVFVDIGD 376
Query: 405 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
QS+ NLSTFS + I+ IL + +SL+LIDE+GSGTDP EG+ALAT IL+ L +
Sbjct: 377 GQSIADNLSTFSSRMVNIISILRQANDQSLILIDELGSGTDPGEGMALATVILEQLFQKG 436
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
+ TTHY+++ K F NAA EF L TL PTYR++ G +G S A +IA +G
Sbjct: 437 ATLMATTHYSEIKQFATKTPGFVNAAMEFDLATLAPTYRLIIGESGKSQAFDIAIKLGLH 496
Query: 525 RKIIQRAQKL 534
K+++RA L
Sbjct: 497 PKMVERAHML 506
>gi|423083945|ref|ZP_17072473.1| MutS domain V protein [Clostridium difficile 002-P50-2011]
gi|423087356|ref|ZP_17075744.1| MutS domain V protein [Clostridium difficile 050-P50-2011]
gi|357543743|gb|EHJ25758.1| MutS domain V protein [Clostridium difficile 002-P50-2011]
gi|357544774|gb|EHJ26761.1| MutS domain V protein [Clostridium difficile 050-P50-2011]
Length = 636
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + + ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPIELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E + YSP L N +E++I +CI + AS++L+ +R
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKVR 154
Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
RN+E + L K I + +I+KR R + IK+S+K + +G
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ SS G T F+EP + L E EE ILS LT I + +IK ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 270 SEYDMVFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+D ++ R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|225865455|ref|YP_002750833.1| putative MutS family protein [Bacillus cereus 03BB102]
gi|423550809|ref|ZP_17527136.1| MutS2 family protein [Bacillus cereus ISP3191]
gi|225789029|gb|ACO29246.1| putative MutS family protein [Bacillus cereus 03BB102]
gi|401188142|gb|EJQ95210.1| MutS2 family protein [Bacillus cereus ISP3191]
Length = 633
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L++ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNNHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|403237025|ref|ZP_10915611.1| MutS family DNA mismatch repair protein [Bacillus sp. 10403023]
Length = 646
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 276/546 (50%), Gaps = 68/546 (12%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
K +E S + + LA+ S P+ +++ I ++ A G L + + L
Sbjct: 41 KKIEHSLHEITEAMNILAISGSIPI--HSLDQIGQYIDQAKKGMALKVDQFTRIVSFLDH 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K+ + E G ++ Y+ + ++ELE +I C+ + D AS D
Sbjct: 99 CQKL-KQFMKDKEYAGPTVSLYAA------SIGDVSELETEISRCLRNGH--VDDYASSD 149
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLL 190
L +R R++ LK+ A + ++G I L I++R R + +K ++ +
Sbjct: 150 LNYLR----RHLATGQEKLKEKAQSLVRSGRIAPYLQDTNISERSGRYVLAVKKEYRKKI 205
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA---ILSLLTAEIAKSERE 247
G L+ S+SG+T F+EP VE + ++ + +IAEET IL LT E+
Sbjct: 206 -QGTVLDTSASGSTLFIEP---VELSTLQEEIELIKIAEETEVERILYELTQLFLSHEQV 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I+ ++ + D+ FA+A +++ + P ++ + I+++ +HP+L ++
Sbjct: 262 IQIAVETMHHYDVLFAKANYSRKIHATIPTINEEFQ------IHLKEARHPMLGNNA--- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P+ I + + R +VITGPNTGGKT +
Sbjct: 313 ---------------------------------IPLTIPIGDKERALVITGPNTGGKTVT 339
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM+++GL +PAK + F I DIGD QS+EQNLSTFS + I++IL+
Sbjct: 340 LKTVGLLTLMAQSGLPIPAKKGSEIAIFQHIFVDIGDGQSIEQNLSTFSSRMVNIIEILQ 399
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ + SLVLIDE+GSGTDP EG+ALA IL+ L ++ TTHY+++ D+ F
Sbjct: 400 MTNDSSLVLIDELGSGTDPREGMALAIVILEQLYEKGATLFATTHYSEMKKFADETEGFL 459
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
N + EF ++TL+PTYR+L G +G S A +IA +G +++RA + + + Q+
Sbjct: 460 NGSMEFDIQTLQPTYRLLLGKSGQSQAFDIAAKLGMHPTLLERAHQKAYQEEKDYHQNIT 519
Query: 548 SELYQS 553
E QS
Sbjct: 520 QETLQS 525
>gi|423418624|ref|ZP_17395713.1| MutS2 family protein [Bacillus cereus BAG3X2-1]
gi|401105230|gb|EJQ13197.1| MutS2 family protein [Bacillus cereus BAG3X2-1]
Length = 633
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 293/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSTNKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ VS+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEVSAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYLIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ + +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYMGNKEYAIEKVNESKIRKPKM 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|423088600|ref|ZP_17076979.1| MutS domain V protein [Clostridium difficile 70-100-2010]
gi|357559486|gb|EHJ40934.1| MutS domain V protein [Clostridium difficile 70-100-2010]
Length = 636
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 249/520 (47%), Gaps = 62/520 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL A + S + L + + ++ G ++ P E+ + LR +
Sbjct: 45 RKLAENKEARKIIENSNHIPLEGLFNAGSTIDKIEKGMIIEPVELVNIEDFLRGCRKMKA 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E + YSP L N +E++I +CI + AS++L+ IR
Sbjct: 105 FMLEK--------EFYSPTLSSYALNITECKSIEDEINYCIKSNK--VDSNASKELKKIR 154
Query: 140 AERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
RN+E + L K I + +I+KR R + IK+S+K + +G
Sbjct: 155 ----RNIEITEGKIKDRLNKFITSTVNKKYIQEFIISKRNDRYVIPIKSSYKNEV-NGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
L+ SS G T F+EP + L E EE ILS LT I + +IK ++ +
Sbjct: 210 LDTSSKGNTVFIEPISVSNLSTELTMLKADETIEEYKILSYLTELIFEKISQIKLNIEIL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E D+ FA+A ++Q + G+ P +++ ++ I+G KHPLL G +
Sbjct: 270 SEYDMLFAKAKYSQKIKGITPKINNNGYIKI-----IKG-KHPLLTGDA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+D ++ R ++ITGPN GGKT ++KT+GL +
Sbjct: 313 -------------------------VPLDFEIGKNYRSLIITGPNAGGKTVTLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM + G + AK F+ + DIGD+QS+E LSTFS HI I +I+ L + +LV
Sbjct: 348 LMVQCGFDISAKEGSEFSVFEKVFVDIGDNQSIENALSTFSSHIKNIAEIMSLSNNSTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG LA S+L+ + + +THY ++ FENA F
Sbjct: 408 LFDEIGSGTEPNEGAGLAISLLEEFYKMGCITIASTHYGEIKKFATLHPEFENAGMMFDK 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y++ G + DSNAL I+K +G +++ RA++ V
Sbjct: 468 ETLEPLYKLTIGKSEDSNALFISKKMGIKNRVLDRAKEYV 507
>gi|358068271|ref|ZP_09154738.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
gi|356693530|gb|EHI55204.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
Length = 846
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 245/473 (51%), Gaps = 56/473 (11%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--I 166
LT+++ +I CI + I + + EL++ + N+ S + V + ++ +
Sbjct: 187 LTQIKNEIARCILSETEISDNASPRLFELVKQHK-----NVQSKMHTVLQSLLESHKEYL 241
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
+IT + C+ I+A K + GI + S+SG+T F+EP + FNN E+R E
Sbjct: 242 MDSIITMKDGAYCLPIRADFKNKV-SGIVHDHSASGSTIFIEPMAVIRFNN-ELREIEIE 299
Query: 227 IAEET-AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
+E IL L++ I +I + + +D +A+A + M P+ + + +
Sbjct: 300 KQQEIDNILEDLSSLIRPYIDDINENIKNMAHLDFVYAKAHLSDAMSASMPVFNDRFY-- 357
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
INI+ +HPL+ P + VPI+I
Sbjct: 358 ----INIKEGRHPLI----------------P-------------------DNIVVPINI 378
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ + ++VITGPNTGGKT S+KT+GL +LM ++GL++PA LP F + ADIGD
Sbjct: 379 SIGDDYSLLVITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSSLPVFKNVYADIGDE 438
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFSGH+ IVDI++ R SL L DE+G+GTDP+EG ALA ++L +L +
Sbjct: 439 QSIEQSLSTFSGHMKNIVDIIKKADRSSLCLFDELGAGTDPAEGAALAIALLSHLHKKGA 498
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ T+HY++L ENA EF++ETLRPTYRI+ G G SNA I++ +G
Sbjct: 499 TVLATSHYSELKIFALNTPGIENACCEFNVETLRPTYRIIIGIPGKSNAFAISRKLGLPE 558
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
II A+K + E + E+ + +R +E++ + + AEI L
Sbjct: 559 YIIDEAKKNI-----EDENMSFEEILTKIEHDRFVIENEKKEINNYKAEIEKL 606
>gi|118586380|ref|ZP_01543830.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
gi|118433197|gb|EAV39913.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
Length = 795
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 285/543 (52%), Gaps = 59/543 (10%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ ++
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQS----GQE 101
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELI 138
+++ + D + + L ++L N LT+ L +++ +D + +LD ASE+L I
Sbjct: 102 ISDFIAMIKDEIWSEN-LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHI 159
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ +
Sbjct: 160 RKNISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQ 217
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+
Sbjct: 218 SQSGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGEL 277
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
DL A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 278 DLIQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS-------------- 317
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
V DI++ + ++ITGPNTGGKT +KTLGL LM+
Sbjct: 318 ----------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMA 355
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+ G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+D
Sbjct: 356 QTGIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLD 415
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T
Sbjct: 416 ELGAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTF 475
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
PTYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +R
Sbjct: 476 SPTYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQR 530
Query: 559 RKL 561
R L
Sbjct: 531 RDL 533
>gi|90962080|ref|YP_535996.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227891101|ref|ZP_04008906.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
gi|122448818|sp|Q1WT38.1|MUTS2_LACS1 RecName: Full=MutS2 protein
gi|90821274|gb|ABD99913.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227866975|gb|EEJ74396.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
Length = 786
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 245/492 (49%), Gaps = 63/492 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
L E+ +K+ I+ + D AS L+ IR + E + L +
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN RL
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239
Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++AE IL L+ E+A E+ + +D A+A +A + PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
V + + HPLL +K V+N
Sbjct: 300 DVY------LRQVWHPLL----------------DMKKAVKN------------------ 319
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498
Query: 523 FDRKIIQRAQKL 534
D+ I+ A++L
Sbjct: 499 LDKMIVMAARQL 510
>gi|227529705|ref|ZP_03959754.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
gi|227350371|gb|EEJ40662.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
Length = 784
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/501 (33%), Positives = 243/501 (48%), Gaps = 93/501 (18%)
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEK--------------- 115
L+ + K+L A L+G L + + +L+ + NF E +E+
Sbjct: 60 LKNIQPQLKRLRINANLNGTELAQITKVLQTSMSVKNFFAEFKEQQKVELRVINESVQQL 119
Query: 116 IGFCIDCKLLI--------ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----- 162
I K LI + D AS L IR L+ K A+I Q
Sbjct: 120 ITIPTITKRLIQSIDPDGRVTDEASTKLHGIR-----------QLISKTEAEIHQRMERF 168
Query: 163 -----AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
A + ++T R R V + A ++ G+ + S+SG T ++EP VE+NN
Sbjct: 169 TQGKNAKYLSDAIVTVRNDRYVVPVLARYRNKF-GGVVHDQSASGQTLYIEPAAVVEYNN 227
Query: 218 MEVRLSNSEIAEETAILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
RL ++I E+ AIL +L +A I+ EI + +D A+A FA+
Sbjct: 228 ---RLRQAQIEEKQAILEVLAELSALISPYRSEIAANAKILGHLDFINAKARFARDHKDS 284
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P+LS D+ + I +HPL+ +P K
Sbjct: 285 LPLLSP------DNQVIIRQARHPLI---------------DPQKV-------------- 309
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
V DIK+ E + +VITGPNTGGKT ++KT GL +M +AGL++PA+ +
Sbjct: 310 ------VANDIKIGDEYQSIVITGPNTGGKTITLKTFGLIQMMGQAGLFIPAQEGSTIAV 363
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD I ADIGD QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA
Sbjct: 364 FDNIYADIGDEQSLEQNLSTFSGHMENVKSILERITSRSLVLLDELGAGTDPKEGAALAM 423
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
SIL Y+ + V+TTHY +L NA+ EF ETL+PTY +L G G SN
Sbjct: 424 SILDYIASKGSTVVITTHYPELKVYGYDRPGTINASMEFDQETLKPTYHLLLGIPGRSNG 483
Query: 515 LNIAKSIGFDRKIIQRAQKLV 535
+ IA+ +G ++ +I ++ LV
Sbjct: 484 IEIAQRLGINQTVITESKSLV 504
>gi|407474588|ref|YP_006788988.1| DNA mismatch repair protein [Clostridium acidurici 9a]
gi|407051096|gb|AFS79141.1| DNA mismatch repair protein [Clostridium acidurici 9a]
Length = 633
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 268/521 (51%), Gaps = 64/521 (12%)
Query: 21 QKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
+++L TS A +++ Q P L+ + DI + G +L+PSE+ + LRA ++
Sbjct: 44 ERMLRDTSEAKSIILRQGNP-PLAGLFDIEDSIEKIDMGTILNPSELITISDFLRACRSI 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
K+ E +L Y+ ++ + ELE++I I I S++L I
Sbjct: 103 -KRFMLDQEYIALNLSNYA------RSIYEIEELEDEINTAIKNNR--ISSSTSKELSRI 153
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAG----GIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R R +EN + +K+ + + I + LIT+R + IK+ +K + +G
Sbjct: 154 R----RYIENTEIKIKEELNRFLSSSKNKDSIREFLITERGDTYTIPIKSEYKNKV-EGR 208
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SS+G T F+EPK +FN+ ++L E EE ILS LT + +EIK ++
Sbjct: 209 IVATSSTGVTVFVEPKSVQKFNSELLKLKEDEKNEEYQILSFLTGFVLSYIKEIKINLEL 268
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++E D+ FA+A ++ +DG+ P L+ + IN++ + +PL+
Sbjct: 269 MMEYDMIFAKAKYSIDIDGIEPKLNKNGY------INLQKVYNPLI-------------- 308
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+ VP+D ++ E R V ITGPN GGKT +KT+GL
Sbjct: 309 -----------------------EKYVPLDFQIGKEFRCVTITGPNAGGKTIVLKTIGLL 345
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
SL ++G+++ F+ I DIGD+QS+E +LSTFS HI I +I+ + +L
Sbjct: 346 SLAVQSGIHIKGNKDCEFSVFENIFIDIGDNQSIENSLSTFSAHIRNISNIVNKSNERTL 405
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL+DE+GSGTDP EG +A SILQ L + + T+HY + +K F+NA+ EF
Sbjct: 406 VLLDELGSGTDPKEGSTIAISILQELYQMGSIVISTSHYDRIKEFSEKHPHFKNASVEFD 465
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y+++ G +G+SNAL I + + + ++ RA+K++
Sbjct: 466 KETLTPLYKLVMGESGESNALWICEKMNLKQSVLNRARKIL 506
>gi|301300876|ref|ZP_07207048.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851475|gb|EFK79187.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 786
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 245/492 (49%), Gaps = 63/492 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
L E+ +K+ I+ + D AS L+ IR + E + L +
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN RL
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239
Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++AE IL L+ E+A E+ + +D A+A +A + PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
V + + HPLL +K V+N
Sbjct: 300 DVY------LRQVWHPLL----------------DMKKAVKN------------------ 319
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498
Query: 523 FDRKIIQRAQKL 534
D+ I+ A++L
Sbjct: 499 LDKMIVMAARQL 510
>gi|290889939|ref|ZP_06553025.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
gi|419757832|ref|ZP_14284157.1| MutS family ATPase [Oenococcus oeni AWRIB304]
gi|419857503|ref|ZP_14380209.1| MutS family ATPase [Oenococcus oeni AWRIB202]
gi|421184273|ref|ZP_15641697.1| MutS family ATPase [Oenococcus oeni AWRIB318]
gi|421186067|ref|ZP_15643462.1| MutS family ATPase [Oenococcus oeni AWRIB418]
gi|421187983|ref|ZP_15645324.1| MutS family ATPase [Oenococcus oeni AWRIB419]
gi|421190064|ref|ZP_15647368.1| MutS family ATPase [Oenococcus oeni AWRIB422]
gi|421192044|ref|ZP_15649313.1| MutS family ATPase [Oenococcus oeni AWRIB548]
gi|421193207|ref|ZP_15650458.1| MutS family ATPase [Oenococcus oeni AWRIB553]
gi|421194500|ref|ZP_15651720.1| MutS family ATPase [Oenococcus oeni AWRIB568]
gi|421197349|ref|ZP_15654526.1| MutS family ATPase [Oenococcus oeni AWRIB576]
gi|290480381|gb|EFD89019.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
gi|399905341|gb|EJN92784.1| MutS family ATPase [Oenococcus oeni AWRIB304]
gi|399966656|gb|EJO01176.1| MutS family ATPase [Oenococcus oeni AWRIB419]
gi|399967557|gb|EJO02030.1| MutS family ATPase [Oenococcus oeni AWRIB318]
gi|399967711|gb|EJO02177.1| MutS family ATPase [Oenococcus oeni AWRIB418]
gi|399969991|gb|EJO04297.1| MutS family ATPase [Oenococcus oeni AWRIB548]
gi|399970864|gb|EJO05154.1| MutS family ATPase [Oenococcus oeni AWRIB422]
gi|399973189|gb|EJO07375.1| MutS family ATPase [Oenococcus oeni AWRIB553]
gi|399975577|gb|EJO09628.1| MutS family ATPase [Oenococcus oeni AWRIB576]
gi|399977918|gb|EJO11889.1| MutS family ATPase [Oenococcus oeni AWRIB568]
gi|410497767|gb|EKP89236.1| MutS family ATPase [Oenococcus oeni AWRIB202]
Length = 795
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 283/541 (52%), Gaps = 55/541 (10%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ +
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105
Query: 82 L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ T E+ ++L++ +L ++ + L +++ +D + +LD ASE+L IR
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ + S
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
V DI++ + ++ITGPNTGGKT +KTLGL LM++
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532
Query: 561 L 561
L
Sbjct: 533 L 533
>gi|229168227|ref|ZP_04295953.1| DNA mismatch repair protein [Bacillus cereus AH621]
gi|228615224|gb|EEK72323.1| DNA mismatch repair protein [Bacillus cereus AH621]
Length = 633
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLSSYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRGNDYEYKIGDRVNLLDHDDFGIVYKEKDNFYNVVVY 568
>gi|23097694|ref|NP_691160.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
gi|22775917|dbj|BAC12195.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
Length = 634
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 288/578 (49%), Gaps = 65/578 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + + +I I+ + +L PS++ +V LR + +
Sbjct: 47 LNETTEARKIIDAKGHIPFLGVSNIDSIIQNIEKDIILDPSDLISVSDFLRGCRKIKSFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTEL---EEKIGFCIDCKLLIILDRASEDLELIR 139
E + ++P+L N +TE EE+I F I K + AS +L+ IR
Sbjct: 107 MEK--------EFFAPVLASYANS--MTEFQHVEEEIDFSI--KGNSVNSAASRELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+ E + L K I + I+K+ R + IKAS+K + G ++VS
Sbjct: 155 NKIDIAEERIKDRLNKFLNNDTNKKYIQEAFISKKDDRYTIPIKASYKNQVS-GTIIDVS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
S G+T FMEP + L E EE +L+ L+ I ++ EIK M+ + + D
Sbjct: 214 SKGSTVFMEPSTVTKLGGELASLRAEEAIEEYQVLATLSGMILENIYEIKINMELISQYD 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
+ FA+A F++ +DG P L+ + I + KHPLL+G +
Sbjct: 274 MVFAKAKFSKEIDGSEPKLNDYGY------IKLVDCKHPLLVGEA--------------- 312
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VP++ ++ + R ++ITGPN GGKT +KT+GL +L +
Sbjct: 313 ---------------------VPLNFEIGQDYRSLIITGPNAGGKTIVLKTIGLLTLATM 351
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+G ++ A + F+ I ADIGD+QS+E LSTFS H+ + +I+ L + +L+L DE
Sbjct: 352 SGFHIAASKETEIAVFENIYADIGDNQSIENALSTFSSHMKNLSEIMRLSNNNTLLLFDE 411
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
IGSGT+P+EG ALA SIL+ + V TTHY ++ + F NAA F +TL
Sbjct: 412 IGSGTEPNEGSALAISILEEFYHMGCITVATTHYGEIKRFSEIHDDFMNAAMRFDNDTLE 471
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
P Y+++ G +G+SNAL I++ + I+QRA + ++ + ++ ++++ + +++ +
Sbjct: 472 PLYQLVIGKSGESNALWISRKMNVPENILQRASQYMQNKGYQLERVNENKIRKPKIKKEK 531
Query: 560 KLESQA------RTAASLHAEIMDLYREDSTSASISVY 591
++ + R H +I +Y+E +S ++ VY
Sbjct: 532 SVQYKYEYSKGDRVKLLEHDDIGIVYKEMDSSYNVVVY 569
>gi|381182856|ref|ZP_09891637.1| DNA mismatch repair protein MutS domain protein [Listeriaceae
bacterium TTU M1-001]
gi|380317238|gb|EIA20576.1| DNA mismatch repair protein MutS domain protein [Listeriaceae
bacterium TTU M1-001]
Length = 627
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 259/513 (50%), Gaps = 52/513 (10%)
Query: 24 LNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +TS A A++ S Q L L+ + I +L GQ L P E+ + LR+ V ++
Sbjct: 47 LQETSEARAILNSGQNLPLAGVSHIDQLLGKIDRGQELMPQELTEIADFLRSTRRV-QQF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E E L YS ++ +F+ E+E++I I ++ D AS L +R
Sbjct: 106 MEKNEHIAPILTGYSTSIQ-----SFI-EVEDEIYAAIRNGEVV--DEASRALRKVRKAI 157
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
E + L+K I + ++K+ R V IKAS + +P G ++ S G
Sbjct: 158 LETQEKISLRLEKFMKNSQNRKYIQEFFVSKKNERYTVPIKASFQKFVP-GSVVDSSGKG 216
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
T F+EP+ + N+ + L E AE IL LT + + IK+ D + E D F
Sbjct: 217 MTVFIEPEAVQKLNDELIGLYAWESAEVYQILMTLTGSVIEKLDGIKHNKDVIAEFDFIF 276
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+ ++ M+G+ P +++ + I ++ +HP LLG+
Sbjct: 277 AKGKLSRQMEGISP------NINQNGRIWLKNARHPFLLGTD------------------ 312
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VP+ ++ R ++ITGPN GGKT +KT+GL +LM+ AGL
Sbjct: 313 -----------------NVPLQFEIGEAYRSLIITGPNAGGKTVVLKTIGLFTLMTMAGL 355
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA + FD + DIGD+QS+E LSTFS H+ I DI+ ++++L+L DEIGS
Sbjct: 356 HIPADEGAEMAIFDHVFVDIGDNQSIENALSTFSSHMRNIADIVSRTNKQTLLLFDEIGS 415
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA +IL+ + + TTHYA++ + F NA F+ ETL P Y
Sbjct: 416 GTEPNEGAALAIAILEACYKKGATTIATTHYAEIKKYGSEHPDFMNAKMAFNQETLEPKY 475
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+++ G +G+SNAL IA+ + D KII++A + +
Sbjct: 476 QLIIGESGESNALFIARKMNLDDKIIRQAARYM 508
>gi|206968844|ref|ZP_03229799.1| putative MutS family protein [Bacillus cereus AH1134]
gi|206735885|gb|EDZ53043.1| putative MutS family protein [Bacillus cereus AH1134]
Length = 633
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ ++G+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSINGIEPKLNDHGYV------HLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREFHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|257886249|ref|ZP_05665902.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257822105|gb|EEV49235.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 642
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 251/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +LSP+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILSPADLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQAPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASHNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNERYQLLKAEEISEEYQVLAALTGAIAENEEAIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H+ +HP L
Sbjct: 280 KFSREINGITPRINKSEHIIVKQG------RHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|118478748|ref|YP_895899.1| DNA mismatch repair protein [Bacillus thuringiensis str. Al Hakam]
gi|118417973|gb|ABK86392.1| DNA mismatch repair protein [Bacillus thuringiensis str. Al Hakam]
Length = 638
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 52 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 111
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 112 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 159
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 160 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 214
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 215 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 274
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L++ + I++ KHPLL G
Sbjct: 275 SQYDMVFAKAKFSKSIDGIEPKLNNHGY------IHLVNCKHPLLSGKV----------- 317
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 318 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 352
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 353 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 412
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 413 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 472
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 473 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 532
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 533 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 573
>gi|336435678|ref|ZP_08615393.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001131|gb|EGN31277.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 791
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 200/364 (54%), Gaps = 42/364 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITLRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + A+ EI+ + ++D FAR A M PIL+++
Sbjct: 245 EIQVILARLSEDTAEYIEEIRTDYRVLTDLDFIFARGQLALSMSASRPILNNEGR----- 299
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL + VPI + +
Sbjct: 300 -IHIRDGRHPLLDARKV-----------------------------------VPITVTLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 EDFSLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAADRSELAVFHQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V +SLVL DE+G+GTDP+EG ALA +IL +L +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKDVDEQSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+L+PTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVFALSTEGVENACCEFDVESLKPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRAQ 532
+ A+
Sbjct: 504 EDAK 507
>gi|116490536|ref|YP_810080.1| MutS family ATPase [Oenococcus oeni PSU-1]
gi|116091261|gb|ABJ56415.1| MutS family ATPase [Oenococcus oeni PSU-1]
Length = 795
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 283/541 (52%), Gaps = 55/541 (10%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ +
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105
Query: 82 L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ T E+ ++L++ +L ++ + L +++ +D + +LD ASE+L IR
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ + S
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
V DI++ + ++ITGPNTGGKT +KTLGL LM++
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532
Query: 561 L 561
L
Sbjct: 533 L 533
>gi|301054982|ref|YP_003793193.1| MutS family DNA mismatch repair protein [Bacillus cereus biovar
anthracis str. CI]
gi|300377151|gb|ADK06055.1| DNA mismatch repair protein, MutS family [Bacillus cereus biovar
anthracis str. CI]
Length = 633
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L++ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNNHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ +Y
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVIY 568
>gi|49478253|ref|YP_037581.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329809|gb|AAT60455.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 633
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|52142038|ref|YP_084791.1| DNA mismatch repair protein [Bacillus cereus E33L]
gi|51975507|gb|AAU17057.1| DNA mismatch repair protein [Bacillus cereus E33L]
Length = 633
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGYV------HLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|414084421|ref|YP_006993129.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
gi|412998005|emb|CCO11814.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
Length = 788
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 266/538 (49%), Gaps = 70/538 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G +L+ EI + + LR V + + +E+ G L R L EL+ L L + I
Sbjct: 81 GAMLNGIEIAQIGKVLRTTTEVTRFFDDLSEI-GVELFR---LYELVAKLVTLPTLNQMI 136
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLIT 172
ID + +D AS+ L+ IR KR+ E LDSL++ AQ + L+T
Sbjct: 137 REAIDEDGHV-MDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +KA ++ G+ + SS+G T F+EP+ V+ NN +L E E
Sbjct: 191 MRNDRYVIPVKAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDR 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+ EIA EI M + ++D A+A + + + P+++ ++ V F +
Sbjct: 250 ILAELSNEIAPYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA--- 306
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ K V N DI + + +
Sbjct: 307 ---RHPLI----------------DEKQAVAN-------------------DILIGGDYQ 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+VITGPNTGGKT ++KTLGL LM ++GL LP ++ F + ADIGD QS+EQ+L
Sbjct: 329 ALVITGPNTGGKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAV 468
STFS H++ IV IL + +SL+L DE+G+GTDP EG ALA +IL D+VG +
Sbjct: 389 STFSSHMTNIVSILNKIDDKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY +L NA+ EF +ETL PTYR+L G G SNA I+K +G D +I
Sbjct: 445 ATTHYPELKAYGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVI 504
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSA 586
A+ L+ + + +E+ L E RRK+ + E + +D T+A
Sbjct: 505 DSARSLI-----DGESQNLNEMIADL-ENRRKMTEMEYHEVRQYVEEAETLYQDLTTA 556
>gi|304440485|ref|ZP_07400372.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370963|gb|EFM24582.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 786
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 278/547 (50%), Gaps = 73/547 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L + V LR V+ + KK E + +G S + + LL ++E++I
Sbjct: 82 GGTLGARSLLNVADFLR-VSRLLKKYIEEEDDEGKSHEIIEDMASLLFTSK---QIEDRI 137
Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
CI + I D AS L IR + K+ E LDS++ ++ Q ++T
Sbjct: 138 SECIISEEEI-SDSASPKLRQIRRNIFVKNKQIREKLDSIVNS-GSKYLQDN-----IVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +K+ +K + G+ ++S++G T ++EP V NN L E E
Sbjct: 191 MREGRYVIPVKSENKNKIK-GLVHDMSATGQTAYIEPIAVVNLNNELKTLEIEEREEIER 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+A +A +IK D + +D FA+A A M+ P ++ D S+ +
Sbjct: 250 ILAELSAYVADYSLQIKGNQDILSRLDFIFAKAKLAFEMEATKP------KINNDLSLKL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPLL + + VPIDI + E
Sbjct: 304 YKARHPLLKKNEV-----------------------------------VPIDISLGKEFT 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++ITGPNTGGKT ++KT+GL ++M++ GL++PA+ ++ FD I +DIGD QS+EQ+L
Sbjct: 329 SLIITGPNTGGKTVTLKTVGLLNIMAQYGLFIPAEEGSQVGIFDKIFSDIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFS H+ IV+ILE SLVL DE+G+GTDP+EG ALA SI+ ++ +R + TTH
Sbjct: 389 STFSSHMVNIVNILENADERSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTH 448
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y L +NA+ EF ++TLRPTYR++ G G SNA I+K +G II+ A+
Sbjct: 449 YNQLKTYALTTEGVQNASMEFDVDTLRPTYRLIIGIPGKSNAFLISKRLGLRDDIIEDAK 508
Query: 533 KL--------------VERLRPERQQHR-KSELYQ-SLMEERRKLESQARTAASLHAEIM 576
K +E+ R E ++HR ++ELY+ L ++ ++LE + + +I+
Sbjct: 509 KQMSQDSIEFEKVLENIEKDRWEIEKHRSEAELYKIDLEKQNKRLEEELASMKEKREDIL 568
Query: 577 DLYREDS 583
+ R ++
Sbjct: 569 EKARREA 575
>gi|154499931|ref|ZP_02037969.1| hypothetical protein BACCAP_03588 [Bacteroides capillosus ATCC
29799]
gi|150271529|gb|EDM98786.1| MutS2 family protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 791
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 268/516 (51%), Gaps = 55/516 (10%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
++ Q+L +T+AA+ M ++ P LS ++ +A L A G L+ E+ + LRA
Sbjct: 44 DDVQRLQAETTAAVNMTALRGSPA-LSGVKPVAASLQRADMGGALNTRELLDIAAVLRAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + A E +G + L L FL E+KI I + I D AS +L
Sbjct: 103 RSA--RDYAAGENNGKTC--IDHLFASLTANRFL---EDKITGSILGENEIA-DSASPEL 154
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +L+K+ + QA + +P+IT R R V +++ K +P G+
Sbjct: 155 ASIRRHIRATSAKVRDILQKLISS-SQAKYLQEPIITMRSDRYVVPVRSECKNDVP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+VSSSG T+F+EP G V+ NN L E E IL+ L+A+ A + +I D +
Sbjct: 213 HDVSSSGGTFFIEPMGVVKANNELRELQADEEKEIDRILAELSADCAAHKEDIAQDYDLL 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +D+ FARA + M P + S+ I + +HPLL
Sbjct: 273 IMLDVIFARAKLSYRMRASEPKIVSRG-------ICLRQARHPLL--------------- 310
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K+ V D+ + + +VITGPNTGGKT ++KT+GL +
Sbjct: 311 DPNKA--------------------VANDLYLGGDFDTLVITGPNTGGKTVTLKTIGLLT 350
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++ GL++P + + FD +L+DIGD QS+ Q+LSTFS H+ IV IL+ ++L+
Sbjct: 351 LMAQCGLHIPVADDSTVMIFDRVLSDIGDEQSIAQSLSTFSSHMVNIVGILKEADDKTLI 410
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L ENA+ EF +
Sbjct: 411 LFDELGAGTDPIEGAALAAAIIEQSRELGALVAATTHYAELKVYAMTTAGVENASCEFDV 470
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
+L PTYR+L G G SNA I++ +G +++I +A
Sbjct: 471 NSLAPTYRLLIGIPGKSNAFAISERLGLPKEVIDKA 506
>gi|423401755|ref|ZP_17378928.1| hypothetical protein ICW_02153 [Bacillus cereus BAG2X1-2]
gi|401653133|gb|EJS70684.1| hypothetical protein ICW_02153 [Bacillus cereus BAG2X1-2]
Length = 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 265/521 (50%), Gaps = 67/521 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + +S IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVESIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ L + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRLSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ETL P Y+++ G +G+SNAL IA + +++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKEYME 508
>gi|229179759|ref|ZP_04307107.1| DNA mismatch repair protein [Bacillus cereus 172560W]
gi|228603680|gb|EEK61153.1| DNA mismatch repair protein [Bacillus cereus 172560W]
Length = 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ ++G+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSINGIEPKLNDHGYV------HLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S + +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESNIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREFHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|407705870|ref|YP_006829455.1| glyoxalase family protein superfamily [Bacillus thuringiensis MC28]
gi|407383555|gb|AFU14056.1| DNA mismatch repair protein [Bacillus thuringiensis MC28]
Length = 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 286/583 (49%), Gaps = 76/583 (13%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARTILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHG------NIHLMNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +G ++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGFHIAGDKETEIAIFEHVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS 548
ETL P Y+++ G +G+SNAL IA + ++QRA++ +E++ + RK
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKI--RKP 525
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
+ Q+ E + + R + + LY+E ++ VY
Sbjct: 526 KFVQAKRESHYEYKVGDRVNLLDYDDFGILYKEKDNFYNVVVY 568
>gi|392531789|ref|ZP_10278926.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 788
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 266/538 (49%), Gaps = 70/538 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G +L+ EI + + LR V + + +E+ G L R L EL+ L L + I
Sbjct: 81 GAMLNGIEIAQIGKVLRTTTEVTRFFDDLSEI-GVELFR---LYELVAKLVTLPTLNQMI 136
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLIT 172
ID + +D AS+ L+ IR KR+ N LDSL++ AQ + L+T
Sbjct: 137 REAIDEDGHV-MDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +KA ++ G+ + SS+G T F+EP+ V+ NN +L E E
Sbjct: 191 MRNDRYVIPVKAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDR 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+ EIA EI M + ++D A+A + + + P+++ ++ V F +
Sbjct: 250 ILAELSNEIAPYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA--- 306
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ K V N DI + + +
Sbjct: 307 ---RHPLI----------------DEKQAVAN-------------------DILIGGDYQ 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+VITGPNTGGKT ++KTLGL LM ++GL LP ++ F + ADIGD QS+EQ+L
Sbjct: 329 ALVITGPNTGGKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAV 468
STFS H++ IV IL + +SL+L DE+G+GTDP EG ALA +IL D+VG +
Sbjct: 389 STFSSHMTNIVSILNKIDNKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY +L NA+ EF +ETL PTYR+L G G SNA I+K +G D +I
Sbjct: 445 ATTHYPELKAYGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVI 504
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSA 586
A+ L+ + + +E+ L E RRK+ + E + +D T+A
Sbjct: 505 DSARSLI-----DGESQNLNEMIADL-ENRRKMTEMEYHEVRQYVEEAETLYQDLTTA 556
>gi|229092456|ref|ZP_04223614.1| DNA mismatch repair protein [Bacillus cereus Rock3-42]
gi|228690919|gb|EEL44692.1| DNA mismatch repair protein [Bacillus cereus Rock3-42]
Length = 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|423669077|ref|ZP_17644106.1| MutS2 family protein [Bacillus cereus VDM034]
gi|423674794|ref|ZP_17649733.1| MutS2 family protein [Bacillus cereus VDM062]
gi|401299634|gb|EJS05230.1| MutS2 family protein [Bacillus cereus VDM034]
gi|401309376|gb|EJS14741.1| MutS2 family protein [Bacillus cereus VDM062]
Length = 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAG----GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSVNKKYIQEFFISKKDDRYTIPIKSSFKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELAGLKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLMNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLSGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKAYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|228909282|ref|ZP_04073108.1| DNA mismatch repair protein [Bacillus thuringiensis IBL 200]
gi|228850371|gb|EEM95199.1| DNA mismatch repair protein [Bacillus thuringiensis IBL 200]
Length = 633
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + KK
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
E L Y+ N +TE +EE+I F I + + AS++L+ IR
Sbjct: 106 MLDKEFFASVLASYA---------NSMTEYKSIEEEINFSIKGNSIDV--AASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNVELAGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGK------------ 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 312 ------------------------VVPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREYHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|8809580|dbj|BAA97131.1| DNA mismatch repair protein MutS2-like [Arabidopsis thaliana]
Length = 795
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 200/617 (32%), Positives = 302/617 (48%), Gaps = 99/617 (16%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
+G +K +S ES KLL++T AA+ M++ S LDLS+I + + A
Sbjct: 72 LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 131
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
L + V LR N+ L A + DGD +R+ PL EL+ N +F+ +
Sbjct: 132 RLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLV 191
Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
E+ ID I D AS L R R+R ++ L+ L+++ I ++ D+ ++
Sbjct: 192 EQ----VIDPDG-TIKDSASSAL---RQSRER-VQTLERKLQQLLDAIIRSQKDDESVMI 242
Query: 173 KRR------SRMCVGIKASHKYLLPDGIALN--------------VSSSGATYFMEPKGA 212
K + R C+ + +S++ +G+ L+ S SG EP A
Sbjct: 243 KFQLAAEIDGRWCIQM-SSNQLTSVNGLLLSSVYFQVLSLEDNMCFSGSGGGTAAEPIAA 301
Query: 213 VEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 271
V N+ +++ + + +A+ E ILS+LT +I ARA +++
Sbjct: 302 VSMND-DLQSARASVAKAEAEILSMLTEKIN--------------------ARATYSRAY 340
Query: 272 DGVCP--ILSSQSHVSFDSS------INIEGIK---------------HPLLLGSSLRSL 308
G P L + V S+ IN+ K HPLLL + +
Sbjct: 341 GGAHPDIYLPPEDEVESLSAGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKGI 400
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
K T ++ G P+P D ++ TRV+VITGPNTGGKT +
Sbjct: 401 RKTRETVKFHK--------TADTVLSGAP--PIPADFQISKGTRVLVITGPNTGGKTICL 450
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
K++GLA++M+K+GLY+ A R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL
Sbjct: 451 KSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILSH 510
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFE 487
+ SLVL+DE+G+GT+P EG AL +IL+ + L + TTH+ +L LK ++ FE
Sbjct: 511 STSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAFE 570
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ--- 544
NA EF L+PTY+ILWG G SNA+NIA +G II+ A++L E +
Sbjct: 571 NACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVIL 630
Query: 545 --HRKSELYQSLMEERR 559
R + YQ L+ E R
Sbjct: 631 DMERYKQEYQRLLNESR 647
>gi|256847954|ref|ZP_05553398.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715014|gb|EEU29991.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
Length = 791
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 215/408 (52%), Gaps = 53/408 (12%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R + ++A ++ G+ + S+SG T ++EP+ VE NN RL ++I E
Sbjct: 188 IITMRNDRYVIPVEAHYRSRF-GGVVHDQSASGQTLYIEPQNVVEINN---RLRQAQIEE 243
Query: 230 ETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
+ L+ L+A IA +EI + +D A+A A M P+++
Sbjct: 244 RQEVRRVLAELSALIAPYRKEIANNERLLGHLDFVNAKARLATKMHATLPVIND------ 297
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
D IN+ +HPL+ +P + VP DI+
Sbjct: 298 DGLINLRQARHPLI---------------DPQRV--------------------VPNDIQ 322
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ + R +VITGPNTGGKT ++KTLGL LM ++G ++PA ++ FD + ADIGD Q
Sbjct: 323 LGDQYRTIVITGPNTGGKTITLKTLGLIQLMGQSGFFIPANEGSQITIFDNVFADIGDEQ 382
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
SLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL ++
Sbjct: 383 SLEQNLSTFSGHMENVKRILEQITERSLVLLDELGAGTDPKEGAALAMAILNQIQQVGSE 442
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
V+TTHY +L + + NA+ EF ++T +PTYR++ G G SN + IA+ +G
Sbjct: 443 VVITTHYPELKVYGFERPQTINASMEFDVDTFQPTYRLMLGVPGQSNGIAIAQRLGLAST 502
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
+I AQ LV + + + + L+E+R++ A L AE
Sbjct: 503 VINDAQSLV-----KDDSQKLNAMIGELVEQRKQARENQERLAKLVAE 545
>gi|386759420|ref|YP_006232636.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. JS]
gi|384932702|gb|AFI29380.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. JS]
Length = 785
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 293/579 (50%), Gaps = 65/579 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+ S++E +K L++ A A+++ + + DI G L A G +LSPSE +
Sbjct: 33 QLKPSASIDEIKKQLDEVDEASAIIRLRGRAPFGGLVDIRGALRRAEIGSVLSPSEFTEI 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
L AV + +T+ AE DG + PL+ + + L++LE I CID +
Sbjct: 93 SGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV- 146
Query: 128 LDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
LD ASE L IR + + R + L+S+L+ +A + ++T R R + +K
Sbjct: 147 LDHASEKLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVK 202
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+
Sbjct: 203 QEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAE 261
Query: 244 SEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
E+ +L +VL+ +D FA+A +A+ + P+++ I ++ +HPLL
Sbjct: 262 HTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPMMNDTGF------IRLKKARHPLL-- 312
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P V N DI++ + +VITGPNTG
Sbjct: 313 --------------PPDQVVAN-------------------DIELGGDFSTIVITGPNTG 339
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 340 GKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNI 399
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V ILE V+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 400 VGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYN 459
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
NA+ EF +ETL PTY++L G G SNA I+K +G II +A+ +
Sbjct: 460 REGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TA 514
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
+ + + SL + +++ E + S+ E L++E
Sbjct: 515 EHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKE 553
>gi|440781736|ref|ZP_20959964.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
gi|440220454|gb|ELP59661.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
Length = 788
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 221/404 (54%), Gaps = 51/404 (12%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+ T R R + +KA +K +P G+ + SSSGAT F+EP G V NN + E AE
Sbjct: 186 IYTIRGDRYVIPVKAEYKAQVP-GLVHDQSSSGATLFIEPIGLVNLNNEIKEIMLKEQAE 244
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+ IL L+ ++ ++ ++ V E+D FA+A +A ++ + P V+ +
Sbjct: 245 ISRILEELSQKVYENIVLVENNASIVYELDFIFAKAKYASRINAINPA------VNDNGI 298
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+I +HPL+ NP K V +D+ +
Sbjct: 299 IDIVQGRHPLI---------------NPEKV--------------------VAMDVYLGR 323
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +V+TGPNTGGKT ++KT+GL LM+ +G+ +PA+ + + +F + ADIGD QS+E
Sbjct: 324 DFTSLVVTGPNTGGKTVTLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIE 383
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV+I+ SLVL DE+G+GTDP+EG ALA +IL+ LR+R
Sbjct: 384 QSLSTFSSHMTNIVNIMGKADSNSLVLFDELGAGTDPTEGAALAVAILENLRERNTKLAA 443
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L K ENA+ EF +ETL+PTYR+L G G SNA I+K +G II
Sbjct: 444 TTHYSELKAYALKTEGVENASVEFDVETLKPTYRLLIGIPGKSNAFEISKRLGLPDYIID 503
Query: 530 RAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
A+K + + L+ E +L Q+L E+ K E AR + L
Sbjct: 504 EARKGISSDTLKFE-------DLIQTLQEKSIKAEENARRSEML 540
>gi|229031146|ref|ZP_04187156.1| DNA mismatch repair protein [Bacillus cereus AH1271]
gi|228730185|gb|EEL81155.1| DNA mismatch repair protein [Bacillus cereus AH1271]
Length = 633
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 67/520 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVADFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSIDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G +
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKA----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y+++ G +G+SNAL IA + +++QRA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVRERVLQRAKEYM 507
>gi|239628827|ref|ZP_04671858.1| MutS2 family protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518973|gb|EEQ58839.1| MutS2 family protein [Clostridiales bacterium 1_7_47FAA]
Length = 843
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 239/458 (52%), Gaps = 59/458 (12%)
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
+ A E D DSL+ PL L+ LT L +I CI + I D AS L +R
Sbjct: 147 SNAPEDDYDSLE---PLFAGLEP---LTPLNNEIKRCILSEDEIA-DDASPGLSHVRRSM 199
Query: 143 K----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
K R L+S+L + + A +IT R R C+ +K+ +K + G+ +
Sbjct: 200 KVAADRIHTQLNSILNSNRSYLQDA------VITMRDGRYCLPVKSEYKNQV-SGMVHDQ 252
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
SS+G+T F+EP V+ NN L E E A+L+ L+ + A E++ + + ++
Sbjct: 253 SSTGSTLFIEPMAIVKLNNEIRELEIQEQKEIEAVLASLSNQAAPYCGELRMNQELLAQL 312
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D FA+AG A+ P+ + + + I+I+ +HPLL NP
Sbjct: 313 DFIFAKAGLARHYKCSAPVFNDRGY------IHIKDGRHPLL---------------NPQ 351
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
+ VPI+I + + ++++TGPNTGGKT S+KT+GL +LM
Sbjct: 352 TA--------------------VPINIWLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMG 391
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+AGL++PA L FD + ADIGD QS+EQ+LSTFS H++ V IL + SL L D
Sbjct: 392 QAGLHIPAWEGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNTVRILNEANPRSLCLFD 451
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP+EG ALA +IL +L + + TTHY++L ENA EFS+ETL
Sbjct: 452 ELGAGTDPTEGAALAIAILTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETL 511
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
+PTYR+L G G SNA I+ +G II A+ +E
Sbjct: 512 QPTYRLLIGVPGKSNAFAISSKLGLPDYIIDEARNHLE 549
>gi|423483129|ref|ZP_17459819.1| MutS2 family protein [Bacillus cereus BAG6X1-2]
gi|401141902|gb|EJQ49452.1| MutS2 family protein [Bacillus cereus BAG6X1-2]
Length = 633
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 285/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 IDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++ +D +K+ + I + I+K+ R + IK+++K + I
Sbjct: 155 ----NNIDAVDGKIKERLTKFLNNSTNKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ K M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYSTKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKDTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNG 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL-----RPERQQHRKSEL 550
ETL P Y+++ G +G+SNAL IA + +++RA++ + + + RK +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
Q EE + + R H + +Y+E ++ VY
Sbjct: 528 VQEKREEHYEYKKGDRVKLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|299536893|ref|ZP_07050200.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1]
gi|298727717|gb|EFI68285.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1]
Length = 634
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 251/513 (48%), Gaps = 53/513 (10%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + + +I I+ G LL PSE+ ++ LR N+ KK
Sbjct: 47 LNETTEARAILDAEGHVPFLGVSNIEHIMTKLEKGMLLDPSELVSISDFLRGCRNI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
L Y+ + KN +EE+I F I + AS +L+ IR
Sbjct: 106 MLDKTFFAPVLSSYAHSMAEFKN------VEEEINFAIKANR--VDSAASRELKRIRHHM 157
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ + + L K I + I+++ R + IKA++K + G + +SS G
Sbjct: 158 ETTEDKIKERLTKFLNNSANKPYIQEFFISQKDDRYTIPIKATYKNHV-QGTVVEISSKG 216
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
AT FMEP + N L E EE IL+ L+ + + I M+ + + D+ F
Sbjct: 217 ATVFMEPSVIAKLNVELATLKAEEAVEEYQILASLSGLLMEHLHAITINMELISQYDMVF 276
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A F++ + G P ++ ++ I G KHPLL P
Sbjct: 277 AKAKFSRQIGGREPRINDYGYIQL-----ING-KHPLL----------------P----- 309
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
EN+ VP+ + + R ++ITGPN GGKT +KT+GL +L + +G
Sbjct: 310 ENA---------------VPLQFSIAKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++ A + FD I DIGD+QS+E LSTFS H+ + DI+ + +L+L DEIGS
Sbjct: 355 HIVADEGTEMAVFDHIFVDIGDNQSIENALSTFSSHMKNLSDIMRAANNHTLLLFDEIGS 414
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA +IL+ + V TTHY ++ + F NAA F ETL P Y
Sbjct: 415 GTEPNEGAALAIAILEEFYQMGCITVATTHYGEIKRFSEMHPDFMNAAMRFHAETLEPLY 474
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
++L G++G+SNAL I+K + ++QRA+ +
Sbjct: 475 QLLIGTSGESNALWISKKMNVRETVLQRAKDYI 507
>gi|229061069|ref|ZP_04198420.1| DNA mismatch repair protein [Bacillus cereus AH603]
gi|228718152|gb|EEL69790.1| DNA mismatch repair protein [Bacillus cereus AH603]
Length = 633
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+++K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASWKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLSGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRGNDYEYKIGDRVNLLDHDDFGIVYKEKDNFYNVVVY 568
>gi|229100758|ref|ZP_04231595.1| DNA mismatch repair protein [Bacillus cereus Rock3-29]
gi|229116950|ref|ZP_04246333.1| DNA mismatch repair protein [Bacillus cereus Rock1-3]
gi|423378752|ref|ZP_17356036.1| MutS2 family protein [Bacillus cereus BAG1O-2]
gi|423441806|ref|ZP_17418712.1| MutS2 family protein [Bacillus cereus BAG4X2-1]
gi|423447969|ref|ZP_17424848.1| MutS2 family protein [Bacillus cereus BAG5O-1]
gi|423464879|ref|ZP_17441647.1| MutS2 family protein [Bacillus cereus BAG6O-1]
gi|423534221|ref|ZP_17510639.1| MutS2 family protein [Bacillus cereus HuB2-9]
gi|423540512|ref|ZP_17516903.1| MutS2 family protein [Bacillus cereus HuB4-10]
gi|423546744|ref|ZP_17523102.1| MutS2 family protein [Bacillus cereus HuB5-5]
gi|423623465|ref|ZP_17599243.1| MutS2 family protein [Bacillus cereus VD148]
gi|228666478|gb|EEL21937.1| DNA mismatch repair protein [Bacillus cereus Rock1-3]
gi|228682668|gb|EEL36709.1| DNA mismatch repair protein [Bacillus cereus Rock3-29]
gi|401130380|gb|EJQ38049.1| MutS2 family protein [Bacillus cereus BAG5O-1]
gi|401174047|gb|EJQ81259.1| MutS2 family protein [Bacillus cereus HuB4-10]
gi|401180248|gb|EJQ87410.1| MutS2 family protein [Bacillus cereus HuB5-5]
gi|401258634|gb|EJR64819.1| MutS2 family protein [Bacillus cereus VD148]
gi|401634399|gb|EJS52166.1| MutS2 family protein [Bacillus cereus BAG1O-2]
gi|402416638|gb|EJV48954.1| MutS2 family protein [Bacillus cereus BAG4X2-1]
gi|402419316|gb|EJV51596.1| MutS2 family protein [Bacillus cereus BAG6O-1]
gi|402463191|gb|EJV94893.1| MutS2 family protein [Bacillus cereus HuB2-9]
Length = 633
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 286/583 (49%), Gaps = 76/583 (13%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARTILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGN------IHLMNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +G ++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGFHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS 548
ETL P Y+++ G +G+SNAL IA + ++QRA++ +E++ + RK
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKI--RKP 525
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
+ Q+ E + + R + + LY+E ++ VY
Sbjct: 526 KFVQAKRESHYEYKVGDRVNLLDYDDFGILYKEKDNFYNVVVY 568
>gi|339629769|ref|YP_004721412.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
gi|379007116|ref|YP_005256567.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
gi|339287558|gb|AEJ41669.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
gi|361053378|gb|AEW04895.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
Length = 773
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 236/476 (49%), Gaps = 66/476 (13%)
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA---AELDGDSLQRYSPLLELLKNCNFLT 110
A G +L+ E+ A+++T+R ++W L + A L L P LL + + +
Sbjct: 76 AARGGVLTIPELTAIQKTIRVYQSIWTALDQRSGYARLSAAILP-IEPPRALLAHLDRVL 134
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKP 169
+ E ++ D AS L IR R R++E + L ++ A + +P
Sbjct: 135 DAEGRVQ-----------DHASPALAHIRG-RMRDLEREILQLFDRILHAPDWAPYLQEP 182
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
L+T R R + ++ ++ +P G+ + SSSG T ++EP A+E N L E E
Sbjct: 183 LVTVRFGRRVIPVRHEYRNQVP-GVVQDFSSSGQTVYVEPLAALERQNRLSGLMQEEAEE 241
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEID--LAFARAGFAQWMDGVCPILSSQSHVSFD 287
IL+ L+ E+A E+ + R+ D + AR G V P +
Sbjct: 242 IERILAELSREVAGVANELSAIQTRIGWFDELVGIARYGLK--TQSVIPQIGG------- 292
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
+++ G HPLL PVPI + +
Sbjct: 293 DRLHLIGACHPLLTQ-------------------------------------PVPIQVDL 315
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
+ V++I+GPNTGGKT ++KT+GL ++M GL +PA +PWF I AD+GD QS
Sbjct: 316 TRDRPVLIISGPNTGGKTVALKTVGLIAVMGLTGLMVPAHEDSTIPWFRAIWADVGDQQS 375
Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
LE NLSTFSGH++R+ ++E ++L LIDEIG+GTDP EG ALA +++++L +
Sbjct: 376 LEHNLSTFSGHLARLAPMMEDAGEDTLCLIDEIGAGTDPEEGAALAEAMIRHLAQSRAYS 435
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
V++TH+ L L KD R +NA EF ETL PTYR++ G G S A IA+ +GF
Sbjct: 436 VISTHFNRLKLLAYKDDRIQNARVEFDPETLAPTYRLILGEPGSSYAFYIARRLGF 491
>gi|413933872|gb|AFW68423.1| hypothetical protein ZEAMMB73_052095, partial [Zea mays]
Length = 859
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 195/627 (31%), Positives = 304/627 (48%), Gaps = 100/627 (15%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E+SQ LL +T AA+ ++ + +D S ++ +A ++S G ++ E AV
Sbjct: 85 SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSL 144
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A +LD S R + L E + + L + I +D + D A
Sbjct: 145 MMFVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTA 203
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S +L R + +R L L+ K+ + + I R C+ +
Sbjct: 204 SPELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF- 260
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
DG+ L+ S S A +EP AV N+ E++ S + +A+ E +LS LT +I I+
Sbjct: 261 DGLLLS-SRSDAGSMIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQN 318
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
L+ +++D ARA ++ DG P L V+ + +I+ I
Sbjct: 319 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWK 378
Query: 297 -------HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTV 329
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 379 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRV 438
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA--------- 380
L K D PVP+D + ET V+VITGPNTGGKT S+KT+GLASLM+K
Sbjct: 439 SQLEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIVAKLAAVVT 495
Query: 381 ---------------GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
GLY+ A ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I
Sbjct: 496 VVVSCRLLVADGATLGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAI 555
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDK-- 482
+ ESLVL+DE+G+GT+P EG AL S+L+ + L + TTH+ +L LK +
Sbjct: 556 RAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYRLH 615
Query: 483 ----DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL---- 534
+ FENA EF E L+PT++ILWG G SNA+NI + +G I++ +++L
Sbjct: 616 FFLHNNSFENACMEFDEENLKPTFKILWGIPGRSNAINITERLGLPLDIVESSRRLLGTA 675
Query: 535 ----------VERLRPERQQHRKSELY 551
+ERL+ E QQH + Y
Sbjct: 676 GAEINALIMDMERLKQEYQQHLQEAQY 702
>gi|423592581|ref|ZP_17568612.1| MutS2 family protein [Bacillus cereus VD048]
gi|401229246|gb|EJR35761.1| MutS2 family protein [Bacillus cereus VD048]
Length = 633
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 291/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLSSYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPL+ G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLISGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYAIEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRGNDYEYKIGDRVNLLDHDDFGIVYKEKDNFYNVVVY 568
>gi|366053748|ref|ZP_09451470.1| MutS2 family protein [Lactobacillus suebicus KCTC 3549]
Length = 790
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 290/577 (50%), Gaps = 83/577 (14%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA-- 74
E +LL +T+A++ +++ + + + + DI+ L L+ +E+ + R LRA
Sbjct: 41 ETVNELLGETTASVEILRLNGGMPIPQLSDISEQLKRLKIKATLNGTELAQIARVLRASA 100
Query: 75 -VNNVWKKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCID---CKLLIILD 129
+ ++KL + E+D +++ Y L+ + L E G D KL + +
Sbjct: 101 STKDFFEKLRQQ-EIDIKAVEHYVDELVTIPSITKQLVSSVEDDGRLKDEASTKLHGLRE 159
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+ ++ LIR + MEN + ++ + ++T R R + ++A+++
Sbjct: 160 KITQTEALIR----QRMENY--------TRGKESKYLSDSIVTMRNDRYVLPVQANYRNH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI---AEETAILSLLTAEIAKSER 246
G+ + S SG T F+EP+ +E NN RL ++I EE IL+ L++ +A
Sbjct: 208 F-GGVVHDQSQSGLTLFIEPQAVMELNN---RLREAQIDERHEERRILAELSSTLAPYRI 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
EI + + +D A+A A M+ PI+S Q+HV N++ +HPL+
Sbjct: 264 EIAHNETILGHLDFLNAKAAIAHEMNATKPIVSEQNHV------NLKRARHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K V DI++ + ++ITGPNTGGKT
Sbjct: 312 ---------DPKKM--------------------VANDIEIGDAYKAIIITGPNTGGKTI 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL LM ++GLY+P + + F I ADIGD QSLEQNLSTFSGH+ + IL
Sbjct: 343 TLKTIGLIQLMGQSGLYIPTEEESSIGVFGDIFADIGDEQSLEQNLSTFSGHMENVKSIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK-DKDTR 485
+ + SLVL+DE+G+GTDP EG ALA SIL + + +VTTHY +L D+D
Sbjct: 403 DHIDSRSLVLLDELGAGTDPKEGAALAMSILDAIGVKNSYVMVTTHYPELKVYGYDRDQT 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
NA+ EF ETL+PTYR+L G G SNA IA+ +G +II A+ L + + Q
Sbjct: 463 I-NASMEFDQETLQPTYRLLLGIPGRSNAFEIAQRLGISSEIISEARSLTD---DDSQDL 518
Query: 546 RKSELYQSLMEERRK-------LESQARTAASLHAEI 575
K + L+E+R+K LE Q A L E+
Sbjct: 519 NK--MIGDLVEQRKKAHEHELELEHQVADATDLQTEL 553
>gi|229075385|ref|ZP_04208374.1| DNA mismatch repair protein [Bacillus cereus Rock4-18]
gi|228707634|gb|EEL59818.1| DNA mismatch repair protein [Bacillus cereus Rock4-18]
Length = 633
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 286/583 (49%), Gaps = 76/583 (13%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A ++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARTILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGN------IHLMNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +G ++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGFHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-------LVERLRPERQQHRKS 548
ETL P Y+++ G +G+SNAL IA + ++QRA++ ++E++ + RK
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLQRAKEYMGNKEYVIEKVNESKI--RKP 525
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREDSTSASISVY 591
+ Q E + + R + + LY+E ++ VY
Sbjct: 526 KFVQEKRESHYEYKVGDRVNLLDYDDFGILYKEKDNFYNVVVY 568
>gi|423412791|ref|ZP_17389911.1| MutS2 family protein [Bacillus cereus BAG3O-2]
gi|423431424|ref|ZP_17408428.1| MutS2 family protein [Bacillus cereus BAG4O-1]
gi|401103619|gb|EJQ11601.1| MutS2 family protein [Bacillus cereus BAG3O-2]
gi|401117493|gb|EJQ25329.1| MutS2 family protein [Bacillus cereus BAG4O-1]
Length = 633
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKFIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 IEASAKGSTVFIEPHTVTKLNAELGGLKAEEAVEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ ++G+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSINGIEPKLNDHGYV------HLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKGTEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPFYKLVIGKSGESNALWIANKMSVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASLHAEIMD----LYREDSTSASISVY 591
++E+R+ + + ++ D +Y+E ++ VY
Sbjct: 528 VQEKREFHYEYKIGDRVNLLDYDDFGIIYKEKDNFYNVVVY 568
>gi|163784073|ref|ZP_02179025.1| DNA mismatch repair protein MutS [Hydrogenivirga sp. 128-5-R1-1]
gi|159880661|gb|EDP74213.1| DNA mismatch repair protein MutS [Hydrogenivirga sp. 128-5-R1-1]
Length = 769
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 267/529 (50%), Gaps = 63/529 (11%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTL 72
K+ ++ +K+LN T A L + + LS DI L + +LSP EI + L
Sbjct: 38 KNHKDLKKILNLTQAFLDIFTKEGFFPLSNYPDIEETLKLLYIEESILSPVEILDITNIL 97
Query: 73 ---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
R + N ++ +L+ +S++ L L K E E+ I ID + + D
Sbjct: 98 SISREIKNFLRE-----KLNKESIE----FLALYKKLFSSRETEKIIKDSID-EAGFVKD 147
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
AS +L IR +K + + S+L+ + I + +IT R+ R + +K +
Sbjct: 148 SASRELYKIRKSKKEIEQKIKSILEHIIHNPNYEDIIQEKIITIRKDRYVIPVKENFSSK 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET---AILSLLTAEIAKSER 246
L GI + SS+G T F+EP +E NN +LS+ +I E+ IL LT +
Sbjct: 208 LK-GIIHDRSSTGHTIFLEPLNVIELNN---KLSDLKIKEQIEIRKILEFLTNILRNKYN 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
IK + ++E D F+ A +++ + + P +S +IN++ KHPL L S
Sbjct: 264 NIKNTFEAIIEFDYLFSIAKYSRKIKAIFPEISK--------NINLKKAKHPLFLLSG-- 313
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+F PID+ ++ + R +VITGPNTGGKT
Sbjct: 314 ------------------------------KEFK-PIDLILDNDKRGLVITGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SL+ + G+ +P + FD I DIGD+QS+EQNLST+S HIS I +IL
Sbjct: 343 ALKTLGLLSLIFQTGIPVPVDEESEISIFDNIFVDIGDYQSIEQNLSTYSWHISNIKEIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
E +SLVL+DE+ GTDP EG ++ IL++L+++ V+T+H+ + D F
Sbjct: 403 ENTDDKSLVLLDELIPGTDPDEGSSIGIGILEFLKEKKSYIVITSHFKQIKLYALSDEYF 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
A+ F + L+PTY +L+ S G S A IA+ IG + ++++ A+K +
Sbjct: 463 TVASVGFDKKNLKPTYNLLYNSVGQSMAFYIAQKIGINEEVLKNARKYI 511
>gi|418010214|ref|ZP_12649997.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
gi|410554421|gb|EKQ28397.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
Length = 786
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 186/629 (29%), Positives = 303/629 (48%), Gaps = 76/629 (12%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTE-AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +PLK VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPLK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREDSTSAS 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ +T
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTERD 564
Query: 588 ISVYRYQFAVTSTLSKVDFDAIPNIDQCK 616
+ + + S + K A I Q +
Sbjct: 565 AQLQQAKDKANSLVDKAQTKADKIIKQLR 593
>gi|163941116|ref|YP_001646000.1| DNA mismatch repair protein MutS domain-containing protein
[Bacillus weihenstephanensis KBAB4]
gi|229134306|ref|ZP_04263120.1| DNA mismatch repair protein [Bacillus cereus BDRD-ST196]
gi|423518126|ref|ZP_17494607.1| MutS2 family protein [Bacillus cereus HuA2-4]
gi|163863313|gb|ABY44372.1| DNA mismatch repair protein MutS domain protein [Bacillus
weihenstephanensis KBAB4]
gi|228649149|gb|EEL05170.1| DNA mismatch repair protein [Bacillus cereus BDRD-ST196]
gi|401161487|gb|EJQ68851.1| MutS2 family protein [Bacillus cereus HuA2-4]
Length = 633
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 292/581 (50%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P+E+ +V LR + +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPAELVSVSDFLRGCRKIKNFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNTELASWKAEEAMEEYQILATLSGMVLENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLMNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + ++QRA++ + ++ +S++ + +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYMGNKEYAIEKVNESKIRKPKM 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRENDYEYKIGDRVNLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|47564612|ref|ZP_00235657.1| MutS2 family protein [Bacillus cereus G9241]
gi|47558764|gb|EAL17087.1| MutS2 family protein [Bacillus cereus G9241]
Length = 633
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 277/559 (49%), Gaps = 80/559 (14%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGLILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEIDFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENMYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ +V ++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKAIDGIEPKLNDHGYV------HLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------------LRPER 542
ETL P Y+++ G +G+SNAL IA + +++RA++ +E +P+
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKEYMENKEYALEKVNESKIRKPKF 527
Query: 543 QQHRKSELYQSLMEERRKL 561
Q +K Y+ + +R L
Sbjct: 528 VQEKKENHYEYKIGDRVNL 546
>gi|385840651|ref|YP_005863975.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
gi|300214772|gb|ADJ79188.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
Length = 786
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 244/492 (49%), Gaps = 63/492 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIELEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
L E+ +K+ I+ + D AS L+ IR + E + L +
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN RL
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239
Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++AE IL L+ E+A E+ + +D A+A +A + PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
V + + HPLL +K V+N
Sbjct: 300 DVY------LRQVWHPLL----------------GMKKAVKN------------------ 319
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498
Query: 523 FDRKIIQRAQKL 534
D+ I+ A++L
Sbjct: 499 LDKMIVMAARQL 510
>gi|418961600|ref|ZP_13513485.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
gi|380343695|gb|EIA32043.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
Length = 786
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 249/496 (50%), Gaps = 71/496 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
L E+ +K+ I+ + D AS L+ IR + + E L+S + ++
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235
Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L ++AE IL L+ E+A E+ + +D A+A +A + PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
S ++ V + + HPLL +K V+N
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILD 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ + V TTHY +L + NA+ EF + TL+PTYR+L G G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDIS 494
Query: 519 KSIGFDRKIIQRAQKL 534
+ +G D+ I+ A++L
Sbjct: 495 QRLGLDKMIVMAARQL 510
>gi|417810043|ref|ZP_12456724.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
gi|335350967|gb|EGM52463.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
Length = 786
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 249/496 (50%), Gaps = 71/496 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
L E+ +K+ I+ + D AS L+ IR + + E L+S + ++
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235
Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L ++AE IL L+ E+A E+ + +D A+A +A + PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
S ++ V + + HPLL +K V+N
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILD 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ + V TTHY +L + NA+ EF + TL+PTYR+L G G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDIS 494
Query: 519 KSIGFDRKIIQRAQKL 534
+ +G D+ I+ A++L
Sbjct: 495 QRLGLDKMIVMAARQL 510
>gi|449095303|ref|YP_007427794.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis XF-1]
gi|449029218|gb|AGE64457.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis XF-1]
Length = 785
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 275/542 (50%), Gaps = 64/542 (11%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEHTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 RE 581
+E
Sbjct: 552 KE 553
>gi|430837379|ref|ZP_19455350.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E0680]
gi|431504225|ref|ZP_19515445.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1634]
gi|430487490|gb|ELA64227.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E0680]
gi|430587489|gb|ELB25715.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1634]
Length = 642
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 252/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +L P+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILQPTDLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQTPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEVIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H I I+ +HP L
Sbjct: 280 KFSREINGITPRINKSEH------IIIKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|160947526|ref|ZP_02094693.1| hypothetical protein PEPMIC_01460 [Parvimonas micra ATCC 33270]
gi|158446660|gb|EDP23655.1| MutS2 family protein [Parvimonas micra ATCC 33270]
Length = 784
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 269/558 (48%), Gaps = 76/558 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E QKLL++T A + L +S I+D+ +LL + +R+ L
Sbjct: 42 EVQKLLDETDEAYRFIIKHRLPGISNIDDLEE------DFKLLEIGQYFPLRKLLE---- 91
Query: 78 VWKKLTEAAELDG----DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
VWK L + L + + + ELL + N +LE + I + I D AS
Sbjct: 92 VWKLLNTSRFLKNIISEEESSEFKNIFELLNSLNTAIQLERDLEISIISEDEI-SDDASS 150
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK---PLITKRRSRMCVGIKASHKYLL 190
DL+ IR R +++ + L++ Q+ DK L T R R V +++ K
Sbjct: 151 DLKRIR----RMIKSKNDLIRDRLNQLISTS--DKLMDNLYTLRDGRYVVPVRSEFKNSF 204
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + S+SG T F+EP V+ NN +L E E IL + + + E+
Sbjct: 205 K-GIVHDQSASGQTVFIEPMFVVDLNNDLKKLEIDEEKEIERILMEFSKRVLEILPELIS 263
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + ID F+R A M+ + PI++++ +S S+ +HPL+
Sbjct: 264 NLNVIANIDFIFSRGKLAYDMEAIKPIINNKGIISLKSA------RHPLI---------- 307
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
D VPIDI + +VITGPNTGGKT ++KT
Sbjct: 308 -------------------------DKDRVVPIDISLGNSFNTLVITGPNTGGKTVTLKT 342
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+G+ +LM++ GL LP ++ + FD + ADIGD QS+EQ+LSTFS H+ I++I+
Sbjct: 343 VGILTLMTQYGLMLPCADNSEVAVFDELFADIGDEQSIEQSLSTFSSHMKNIIEIINRAK 402
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+GSGTDP EG L+ +IL Y ++ + TTHY+ L +NAA
Sbjct: 403 ENSLVLFDELGSGTDPEEGSGLSIAILNYFLEKNIRTIATTHYSQLKMYAMSTENVQNAA 462
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV-------ERLRPERQ 543
EF +E L PTY+++ G +G SNA I+K +G + I A+K + ++L
Sbjct: 463 MEFDVEKLEPTYKLIIGISGKSNAFEISKKLGLNENFIVNAKKFISNNELSFDKLVSSVD 522
Query: 544 QHRKSELYQSLMEERRKL 561
RK Y+ L+ E+R+L
Sbjct: 523 SRRKE--YEELIIEQREL 538
>gi|427394069|ref|ZP_18887571.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
gi|425730239|gb|EKU93079.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
Length = 793
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 291/576 (50%), Gaps = 69/576 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S+EE + LLNQT +++++ + + ++ E I L G L+ EI ++ + ++
Sbjct: 42 SIEEIKMLLNQTGDGVSLLRMKGGIPVTPFESILPQLKRLSIGGGLNGGEIASIMKIIKN 101
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ EA E D L+ + ++L N L++L + I +D ++ D AS
Sbjct: 102 AREIKNFFREAQE-DDIVLENLYAVSDML---NPLSDLSKTIQAVVDEDGRVV-DSASPK 156
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L+ IR K+ +++ L+ + + ++ + +IT R R V +KA K + GI
Sbjct: 157 LKGIRTGIKQVEQSIRQKLENIT-RGSKSRYLTDAIITIRNDRYVVPVKADSKNVFG-GI 214
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S++G T F+EP+ + NN ++ E AE +L+ L+ +I ++++ +
Sbjct: 215 VHDQSATGQTLFVEPQSVLNQNNKLKEYTSQEKAEVDRLLADLSQKITPYSKDLEQDLQV 274
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D A+A +++ + PI V + I + G +HPL+
Sbjct: 275 LTLLDFIAAKAKYSRQLSASQPI------VDDNREIALYGARHPLI-------------- 314
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P D V DI + + + +V+TGPNTGGKT +KTLGL
Sbjct: 315 -DP--------------------DQVVENDITLGLDYKAIVVTGPNTGGKTVVLKTLGLL 353
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+M ++GL+LP K++ R+ F+ ADIGD QS+EQ+LSTFS H++ IV IL + +L
Sbjct: 354 QIMGQSGLHLPVKDNSRIGVFEKCYADIGDEQSIEQSLSTFSSHMTNIVSILSDIDEATL 413
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+++DE+G+GTDP EG ALA +IL Y+ R V+T+HY +L NA+ F
Sbjct: 414 IVLDELGAGTDPQEGAALAIAILDYISARGSTVVITSHYPELKAYAYNRPETINASMAFD 473
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLVERLRPERQ 543
+ +L+PTY++L G G SNA +A+ +G + +II Q +++E L +RQ
Sbjct: 474 VNSLKPTYKLLLGIPGRSNAFEVAQRLGLNNEIIAASKQLMSGESQSVNQMIEDLEAKRQ 533
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+ K QSL +E A+ LH ++ + Y
Sbjct: 534 AYHKRN--QSLQKE-------LYDASKLHNDLKNFY 560
>gi|423477537|ref|ZP_17454252.1| MutS2 family protein [Bacillus cereus BAG6X1-1]
gi|402430169|gb|EJV62249.1| MutS2 family protein [Bacillus cereus BAG6X1-1]
Length = 633
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 264/521 (50%), Gaps = 67/521 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + +S IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVESIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP+ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLHFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ETL P Y+++ G +G+SNAL IA + +++RA++ +E
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKEYME 508
>gi|430758681|ref|YP_007208637.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430023201|gb|AGA23807.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 785
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 275/542 (50%), Gaps = 64/542 (11%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 RE 581
+E
Sbjct: 552 KE 553
>gi|384176446|ref|YP_005557831.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595670|gb|AEP91857.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 785
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 276/542 (50%), Gaps = 64/542 (11%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P + V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPEQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 RE 581
+E
Sbjct: 552 KE 553
>gi|430853014|ref|ZP_19470744.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1258]
gi|430540836|gb|ELA81013.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1258]
Length = 642
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 252/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +L P+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILQPTDLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQTPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEVIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H I I+ +HP L
Sbjct: 280 KFSREINGITPRINKSEH------IIIKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|321312391|ref|YP_004204678.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
gi|320018665|gb|ADV93651.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
Length = 785
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 275/542 (50%), Gaps = 64/542 (11%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 RE 581
+E
Sbjct: 552 KE 553
>gi|424856972|ref|ZP_18281174.1| MutS domain V protein [Enterococcus faecium R499]
gi|402929587|gb|EJX49328.1| MutS domain V protein [Enterococcus faecium R499]
Length = 630
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 252/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +L P+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILQPTDLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQTPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEVIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G+ P ++ H I I+ +HP L
Sbjct: 280 KFSREINGITPRINKSEH------IIIKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|162661179|gb|EDQ48693.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 866
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 168/489 (34%), Positives = 253/489 (51%), Gaps = 63/489 (12%)
Query: 98 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 152
PLLE + +N + LE+ I CID + +LD AS L +R E + R E LDS+
Sbjct: 307 PLLEGISENLSEQKALEDAIKACID-ESAEVLDSASPGLAQVRRELRSGEVRIREKLDSM 365
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
++ + A + LIT R R + +KA ++ GI + S SGAT F+EP+
Sbjct: 366 IRSSSV----AKMLQDQLITIRGDRFVIPVKAEYRSYF-GGIVHDQSGSGATLFIEPESI 420
Query: 213 VEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
V NN +L + + EE I L LTA + + + +D + ++D FA+ A
Sbjct: 421 VAMNN---KLRETRMKEEREIEIILQKLTALVGEQADLLLLDIDLLGQLDFIFAKGRLAH 477
Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
M P ++ + ++ +HPL+ D+E
Sbjct: 478 VMKASQPRMNDRGYLKLKKG------RHPLI--------------------DMEKV---- 507
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
VPID+++ +++TGPNTGGKT ++KT+GL SLM+ +GL++PA+
Sbjct: 508 -----------VPIDVELGNSYSSIIVTGPNTGGKTVTLKTIGLLSLMAMSGLFVPAEEG 556
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
+L FD I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG
Sbjct: 557 SQLCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILNHMTPKSLVLLDEVGAGTDPAEG 616
Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
ALA SIL+++ V TTHY++L + NA+ EF + TL PTYR+L G
Sbjct: 617 SALAISILEHIHSLGCRMVATTHYSELKAYAYERKGVINASMEFDVNTLSPTYRLLVGVP 676
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
G SNA IA+ +G + I+ A+ V + + R + SL E R ES+ A
Sbjct: 677 GRSNAFAIAERLGLPQVILDYARGEV-----KEEDQRVEHMIASLEENRLGAESEREKAE 731
Query: 570 SLHAEIMDL 578
L E+ L
Sbjct: 732 KLRQEMEQL 740
>gi|295114321|emb|CBL32958.1| Mismatch repair ATPase (MutS family) [Enterococcus sp. 7L76]
Length = 637
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 256/522 (49%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLHIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F +AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVSAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|423407062|ref|ZP_17384211.1| MutS2 family protein [Bacillus cereus BAG2X1-3]
gi|401659637|gb|EJS77121.1| MutS2 family protein [Bacillus cereus BAG2X1-3]
Length = 594
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 290/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NHIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELANFKAEEAMEEYQILATLSGMVLENIYSIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLTGQV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ + E R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFDIGQEYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ L + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEELYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYALEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 VQEKRESYYEYKIGDRVNLLDHDDFGIIYKEKDNFYNVVVY 568
>gi|363890216|ref|ZP_09317557.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
gi|361965897|gb|EHL18859.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
Length = 785
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 216/410 (52%), Gaps = 42/410 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L ++ + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIK 509
>gi|424740221|ref|ZP_18168629.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZB2]
gi|422946216|gb|EKU40630.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZB2]
Length = 634
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 250/513 (48%), Gaps = 53/513 (10%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + + +I I+ G LL PSE+ ++ LR N+ KK
Sbjct: 47 LNETTEARAILDAEGHVPFLGVSNIEHIMTKLEKGMLLDPSELVSISDFLRGCRNI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
L Y+ + KN +EE+I F I + AS +L+ IR
Sbjct: 106 MLDKTFFAPVLSSYAHSMAEFKN------VEEEINFAIKANR--VDSAASRELKRIRHHM 157
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ + + L K I + I+++ R + IKA++K + G + +SS G
Sbjct: 158 ETTEDKIKERLTKFLNNSANKPYIQEFFISQKDDRYTIPIKATYKNHV-QGTVVEISSKG 216
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
AT FMEP + N L E EE IL+ L+ + + I M+ + + D+ F
Sbjct: 217 ATVFMEPSVIAKLNVELATLKAEEAVEEYQILASLSGLLMEHLHAITINMELISQYDMVF 276
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A F++ + G P ++ ++ I G KHPLL P
Sbjct: 277 AKAKFSRQIGGREPRINDYGYIQL-----ING-KHPLL----------------P----- 309
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
EN+ VP+ + + R ++ITGPN GGKT +KT+GL +L + +G
Sbjct: 310 ENA---------------VPLQFSIAKDYRSLIITGPNAGGKTVVLKTIGLLTLATMSGF 354
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++ A + FD I DIGD+QS+E LSTFS H+ + DI+ + +L+L DEIGS
Sbjct: 355 HIVADEGTEMAVFDHIFVDIGDNQSIENALSTFSSHMKNLSDIMRAANNHTLLLFDEIGS 414
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GT+P+EG ALA IL+ + V TTHY ++ + F NAA F ETL P Y
Sbjct: 415 GTEPNEGAALAIVILEEFYQMGCITVATTHYGEIKRFSEMHPDFMNAAMRFHAETLEPLY 474
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
++L G++G+SNAL I+K + ++QRA+ +
Sbjct: 475 QLLIGTSGESNALWISKKMNVRETVLQRAKDYI 507
>gi|417788685|ref|ZP_12436368.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
gi|334308862|gb|EGL99848.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
Length = 786
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 248/496 (50%), Gaps = 71/496 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
L E+ +K+ I+ + D AS L+ IR + + E L+S + ++
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235
Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L ++AE IL L+ E+A E+ + +D A+A +A + PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
S ++ V + + HPLL +K V+N
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILD 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ + V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDIS 494
Query: 519 KSIGFDRKIIQRAQKL 534
+ +G D+ I+ A++L
Sbjct: 495 QRLGLDKMIVMAARQL 510
>gi|428280333|ref|YP_005562068.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. natto BEST195]
gi|291485290|dbj|BAI86365.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. natto BEST195]
Length = 785
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 275/542 (50%), Gaps = 64/542 (11%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 RE 581
+E
Sbjct: 552 KE 553
>gi|402838646|ref|ZP_10887149.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
gi|402272206|gb|EJU21427.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
Length = 785
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 216/410 (52%), Gaps = 42/410 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L ++ + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ IN +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKL---INA---RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIK 509
>gi|422733838|ref|ZP_16790137.1| MutS domain V [Enterococcus faecalis TX1341]
gi|315169233|gb|EFU13250.1| MutS domain V [Enterococcus faecalis TX1341]
Length = 673
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 256/523 (48%), Gaps = 53/523 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 75 SLETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRS 134
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +K E + L YS L +F +EE+I I + + AS
Sbjct: 135 SQRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQ 185
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 186 LRKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGT 244
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D
Sbjct: 245 IIEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDT 304
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 305 MTTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL------------- 345
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+ VP+ + E R +VITG N GGKT +KT+GL
Sbjct: 346 -----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLL 382
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
++M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +L
Sbjct: 383 TVMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTL 442
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 443 VLLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFD 502
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 503 RETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|398306013|ref|ZP_10509599.1| recombination and DNA strand exchange inhibitor protein [Bacillus
vallismortis DV1-F-3]
Length = 785
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 268/523 (51%), Gaps = 58/523 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSP+E + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLVDIRGALRRAEIGSVLSPAEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL+ + + L++LE I CID + LD ASE
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEQTAEHTEELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ + P+++ V + +HPLL
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKPLMNDSGFVRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P + V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PAEQVVAN-------------------DIELGGDFSTMVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IV ILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF +ETL PTY++L G G SNA I+K +G II +A+
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAK 509
>gi|384181306|ref|YP_005567068.1| MutS family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324327390|gb|ADY22650.1| MutS family protein, putative [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 633
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 262/520 (50%), Gaps = 67/520 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMFLDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
NM+++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNMDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I + KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IRLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y+++ G +G+SNAL IA + +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKEYM 507
>gi|300117620|ref|ZP_07055402.1| DNA mismatch repair protein [Bacillus cereus SJ1]
gi|298724953|gb|EFI65613.1| DNA mismatch repair protein [Bacillus cereus SJ1]
Length = 631
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 289/581 (49%), Gaps = 72/581 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SL 554
ETL P Y+++ G +G+SNAL IA + +++RA+ + ++ +S++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMHVREHVLKRAKAYMGNKEYTLEKVNESKIRKPKF 527
Query: 555 MEERRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
++E+R+ + + + H + +Y+E ++ VY
Sbjct: 528 LQEKRENHYEYKIGDRVNLLDHDDFGIIYKEIDNFYNVVVY 568
>gi|428768090|ref|YP_007154201.1| MutS2 family protein [Enterococcus faecalis str. Symbioflor 1]
gi|427186263|emb|CCO73487.1| MutS2 family protein [Enterococcus faecalis str. Symbioflor 1]
Length = 673
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 259/530 (48%), Gaps = 53/530 (10%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
A++ LE Q L +T+ A ++ S Q + + I +L G +L+P+E+
Sbjct: 68 AKMVLATRLETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIE 127
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
V LR+ + +K E + L YS L +F +EE+I I + +
Sbjct: 128 VADFLRSSQRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--V 178
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
AS L IR + + +++ + K I + ++ K+ V IKAS+K
Sbjct: 179 ATDASRQLRKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYK 238
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ G + S+ G T F+EP + N L E AEE IL+ LT I + ER
Sbjct: 239 NKV-SGTIIEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERL 297
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ +D + +D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 298 VDQAVDTMTTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL------ 345
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ VP+ + E R +VITG N GGKT
Sbjct: 346 ------------------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVV 375
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL ++M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L
Sbjct: 376 LKTVGLLTVMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLR 435
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V R +LVL+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F
Sbjct: 436 NVKRHTLVLLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFV 495
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+AA F ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 496 SAAMAFDRETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|16079910|ref|NP_390736.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310799|ref|ZP_03592646.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315124|ref|ZP_03596929.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221320042|ref|ZP_03601336.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324324|ref|ZP_03605618.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SMY]
gi|402777014|ref|YP_006630958.1| DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|418031956|ref|ZP_12670439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|452915656|ref|ZP_21964282.1| mutS2 family protein [Bacillus subtilis MB73/2]
gi|3914084|sp|P94545.2|MUTS2_BACSU RecName: Full=MutS2 protein
gi|1770036|emb|CAA99569.1| hypothetical protein [Bacillus subtilis]
gi|2635323|emb|CAB14818.1| putative DNA mismatch repair enzyme [Bacillus subtilis subsp.
subtilis str. 168]
gi|351470819|gb|EHA30940.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|402482194|gb|AFQ58703.1| Putative DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|407960866|dbj|BAM54106.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|407965696|dbj|BAM58935.1| recombination and DNA strand exchangeinhibitorprotein [Bacillus
subtilis BEST7003]
gi|452116004|gb|EME06400.1| mutS2 family protein [Bacillus subtilis MB73/2]
Length = 785
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 275/542 (50%), Gaps = 64/542 (11%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 RE 581
+E
Sbjct: 552 KE 553
>gi|357054005|ref|ZP_09115097.1| hypothetical protein HMPREF9467_02069 [Clostridium clostridioforme
2_1_49FAA]
gi|355385631|gb|EHG32683.1| hypothetical protein HMPREF9467_02069 [Clostridium clostridioforme
2_1_49FAA]
Length = 663
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 254/508 (50%), Gaps = 72/508 (14%)
Query: 31 LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG 90
LA M P +E A + +V G+LL+P E+ + L AV V L + G
Sbjct: 61 LAGMPPMP----AMEHTAEFVARSVRGELLTPEEMEEIGMFLAAVRRVRSYLDKGVSY-G 115
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS-------EDLELIRAERK 143
+L Y +N + EL+E+I I + + DRAS DL L+ + K
Sbjct: 116 IALSFYG------ENLRLMPELKEEIEGAI--RHGRVDDRASNALRDIRRDLLLLEEKIK 167
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
E L KK A+ F L+T R R+C+ +K +K +P G ++ S+SG+
Sbjct: 168 DKTEALLKSQKKFMAESF--------LVT-RNGRLCLPVKKEYKSKIP-GSVIDRSASGS 217
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T F+EP+ + L E EE IL L +IA E K + + ++D FA
Sbjct: 218 TVFIEPETIARLQDEIEGLRIEEDCEERRILYTLMDKIAMEEDGFKENLALLAKLDFVFA 277
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+ + M+ P +++Q I ++G +HPLL G
Sbjct: 278 KGKLSAQMEAGEPAINTQG------IIRLKGARHPLLPG--------------------- 310
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
D VP+D ++ E R +VITGPNTGGKT ++KT+GL LM+ +GL+
Sbjct: 311 --------------DANVPLDFELGGEKRGMVITGPNTGGKTVAIKTVGLFVLMACSGLH 356
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
LP + + +L+L DIGD Q + NLSTFS HI+ +++IL+ + ESLV++DE+GSG
Sbjct: 357 LPCREAD-IAMRNLVLCDIGDGQDILDNLSTFSAHITNVLEILKRATGESLVILDELGSG 415
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG+ +A +IL+ LR R L +VTTHY ++ + +A F E LRP YR
Sbjct: 416 TDPAEGMGIAIAILEQLRLRGCLYLVTTHYPEVKTYAGRHEELISARMAFDRENLRPLYR 475
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRA 531
+ G TGDS AL IAK +G +IQ A
Sbjct: 476 LEMGKTGDSCALYIAKRLGMPEDMIQTA 503
>gi|326693335|ref|ZP_08230340.1| DNA mismatch repair protein MutS2 [Leuconostoc argentinum KCTC
3773]
Length = 801
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 267/541 (49%), Gaps = 65/541 (12%)
Query: 51 LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT 110
+N+++S LS E+ V R A+ + ++++ A E GDSLQ L E N L
Sbjct: 80 INASLSATELS--ELSTVLRNTNAIAHFFEQM--ADEAIGDSLQ---VLPEQAANLATLP 132
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----I 166
L ++I ID I D AS DL+ IR + N + + K Q + G +
Sbjct: 133 TLTQQIEIAIDATGRIN-DEASFDLKAIRGKITGNEQAV-----KTKMQGYTRGKTAQYL 186
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
P++T R R + +KA ++ G+ + S +G T ++EP+ VE NN L E
Sbjct: 187 SDPIVTIRADRYVLPVKAEYRSQF-GGVVHDQSQTGQTLYIEPQAVVELNNKLSELRVKE 245
Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
AEE +L L+A +A EI + + D A+A A +D + P++ ++HV+
Sbjct: 246 QAEEQRVLQELSAALAPYTEEIARNVAILGHFDFVNAKARLAARLDAMQPVVDPENHVAL 305
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
+ HPLL K ++ V DI
Sbjct: 306 QQAW------HPLL--------------------------------DKNVA---VANDII 324
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ + + ++ITGPNTGGKT ++KTLGL LM+++GL++ K + F + ADIGD Q
Sbjct: 325 LGEDYKAIIITGPNTGGKTITIKTLGLLQLMAQSGLFITTKRPSTVGVFHEVFADIGDEQ 384
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+EQ+LSTFS H++ IV +L+ + ++LV+ DE+G+GTDP+EG ALA +IL +
Sbjct: 385 SIEQSLSTFSSHMANIVSMLDQIDDKTLVIFDELGAGTDPAEGAALAIAILDKVASLGAY 444
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
+ TTHY +L NA+ F +ETL+PTY+ L G G SNAL IAK +GF
Sbjct: 445 VIATTHYPELKLYGYNRPETLNASMVFDVETLKPTYQFLMGVPGQSNALAIAKRLGFGDD 504
Query: 527 IIQRAQKLVERLRPERQQH------RKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+I A L + + Q ++ + Q E +L+S A A +L A+ L R
Sbjct: 505 VIGAATALTDESDQDLNQMIADLVAQREAVKQHDAELTMQLKSTAEQAEALAAKEAQLER 564
Query: 581 E 581
+
Sbjct: 565 D 565
>gi|412992595|emb|CCO18575.1| MutS2 family protein [Bathycoccus prasinos]
Length = 874
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 269/536 (50%), Gaps = 53/536 (9%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL--------TEAAELDGDSLQRYSPLLE 101
L A GQ LS V TL A+ V ++ + + D +L++ + L
Sbjct: 152 FLEGAKKGQTLSAGSFVDVYTTLVAMEKVCDEIYIDDDASGADDDDDDVKALRKATESLR 211
Query: 102 LLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
++ + + ++I CI+ + I + ASEDL IR+ + L L +A +
Sbjct: 212 ACRDDEKVHAMRKEIERCINVDISSGAIRNDASEDLAQIRSNLSSTAKTLRKTLNDIANE 271
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ Q ++ I R R C+ +K L GI L S SGAT F EP+ + NN
Sbjct: 272 MAQKKFAERAQIVTRLGRECIPMKLGSAGQLK-GIVLATSDSGATVFKEPEEVIALNNFL 330
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI-----DLAFARAGFAQWMDGV 274
L E E IL LT+E+ +E+ ++ LE+ DLA A+A A+WM G
Sbjct: 331 SELKELEEMEIEVILKRLTSEL----KEVADVIQEALEVGMTTADLANAKARHAKWMSGS 386
Query: 275 CPI-LSSQSHVSFDSSINIEGIKHPLLLGSSLRSL-------------SAASSNSNPLKS 320
P+ + S + S + ++I +HPLLL L L A P
Sbjct: 387 RPVFMDSSASSSSEKKVSITNAQHPLLLEKYLPKLPNFLGDDDDENDKQKAWEKLAPGSF 446
Query: 321 DVENSEMTVGSLSKGISDFP-----VPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
EN+E + S +G + F VPI+ ++ E V ITGPNTGGKTAS+KTLG+
Sbjct: 447 YDENAEEEIDS-KQGRTRFDCRSKIVPINFHIDAEATAVAITGPNTGGKTASLKTLGILV 505
Query: 376 LMSKAGLYLP----AKNHPR--LPWFDLILADIGDHQSLE---QNLSTFSGHISRIVDIL 426
LM++AG+YLP + H + LP+ + D+GD Q+L+ LSTF HI R+ IL
Sbjct: 506 LMARAGMYLPCGGESSEHGQQILPFVRTVACDLGDSQTLQLGDGGLSTFGAHIRRLKRIL 565
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS----CLKDK 482
E + +SLVL+DE GSGTDP EG ALA ++ + + L V+T+H+ ++ + D
Sbjct: 566 ESSTEDSLVLLDEPGSGTDPREGAALAVAVSSAVAKKSKLLVLTSHFEEVKQFALAVDDN 625
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
D +F AA F +E RPTY ++WG T DSNAL+I++ +G D +++ A + R+
Sbjct: 626 DNQFRVAAVRFDVENNRPTYELVWGETEDSNALSISRGLGLDGDLLEEATQAHARM 681
>gi|257417121|ref|ZP_05594115.1| DNA mismatch repair protein MutS [Enterococcus faecalis ARO1/DG]
gi|257158949|gb|EEU88909.1| DNA mismatch repair protein MutS [Enterococcus faecalis ARO1/DG]
Length = 637
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLVLTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F E EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADF-RETEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|227518181|ref|ZP_03948230.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0104]
gi|424676096|ref|ZP_18112974.1| MutS domain V protein [Enterococcus faecalis ERV103]
gi|424680698|ref|ZP_18117500.1| MutS domain V protein [Enterococcus faecalis ERV116]
gi|424682884|ref|ZP_18119643.1| MutS domain V protein [Enterococcus faecalis ERV129]
gi|424685813|ref|ZP_18122498.1| MutS domain V protein [Enterococcus faecalis ERV25]
gi|424689114|ref|ZP_18125704.1| MutS domain V protein [Enterococcus faecalis ERV31]
gi|424693407|ref|ZP_18129850.1| MutS domain V protein [Enterococcus faecalis ERV37]
gi|424695588|ref|ZP_18131969.1| MutS domain V protein [Enterococcus faecalis ERV41]
gi|424701314|ref|ZP_18137489.1| MutS domain V protein [Enterococcus faecalis ERV62]
gi|424702408|ref|ZP_18138564.1| MutS domain V protein [Enterococcus faecalis ERV63]
gi|424706962|ref|ZP_18142950.1| MutS domain V protein [Enterococcus faecalis ERV65]
gi|424718737|ref|ZP_18147970.1| MutS domain V protein [Enterococcus faecalis ERV68]
gi|424721780|ref|ZP_18150850.1| MutS domain V protein [Enterococcus faecalis ERV72]
gi|424725169|ref|ZP_18154090.1| MutS domain V protein [Enterococcus faecalis ERV73]
gi|424726991|ref|ZP_18155638.1| MutS domain V protein [Enterococcus faecalis ERV81]
gi|424735363|ref|ZP_18163829.1| MutS domain V protein [Enterococcus faecalis ERV85]
gi|424747625|ref|ZP_18175794.1| MutS domain V protein [Enterococcus faecalis ERV93]
gi|227074337|gb|EEI12300.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0104]
gi|402353538|gb|EJU88365.1| MutS domain V protein [Enterococcus faecalis ERV116]
gi|402357770|gb|EJU92470.1| MutS domain V protein [Enterococcus faecalis ERV103]
gi|402366318|gb|EJV00708.1| MutS domain V protein [Enterococcus faecalis ERV129]
gi|402369174|gb|EJV03464.1| MutS domain V protein [Enterococcus faecalis ERV25]
gi|402369267|gb|EJV03554.1| MutS domain V protein [Enterococcus faecalis ERV31]
gi|402372111|gb|EJV06242.1| MutS domain V protein [Enterococcus faecalis ERV62]
gi|402374490|gb|EJV08508.1| MutS domain V protein [Enterococcus faecalis ERV37]
gi|402379588|gb|EJV13382.1| MutS domain V protein [Enterococcus faecalis ERV41]
gi|402380696|gb|EJV14442.1| MutS domain V protein [Enterococcus faecalis ERV68]
gi|402385935|gb|EJV19455.1| MutS domain V protein [Enterococcus faecalis ERV65]
gi|402387618|gb|EJV21092.1| MutS domain V protein [Enterococcus faecalis ERV63]
gi|402390307|gb|EJV23661.1| MutS domain V protein [Enterococcus faecalis ERV72]
gi|402391753|gb|EJV25034.1| MutS domain V protein [Enterococcus faecalis ERV73]
gi|402398171|gb|EJV31133.1| MutS domain V protein [Enterococcus faecalis ERV81]
gi|402403922|gb|EJV36569.1| MutS domain V protein [Enterococcus faecalis ERV85]
gi|402408581|gb|EJV41040.1| MutS domain V protein [Enterococcus faecalis ERV93]
Length = 637
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 256/522 (49%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + +++++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQDIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMEMMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|257091224|ref|ZP_05585585.1| DNA mismatch repair protein mutS [Enterococcus faecalis CH188]
gi|257000036|gb|EEU86556.1| DNA mismatch repair protein mutS [Enterococcus faecalis CH188]
Length = 594
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 254/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P V+ + ++I KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITP------KVNKEERLHIVQGKHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDYFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|329122156|ref|ZP_08250764.1| recombination and DNA strand exchange inhibitor protein MutS2
[Dialister micraerophilus DSM 19965]
gi|327466963|gb|EGF12479.1| recombination and DNA strand exchange inhibitor protein MutS2
[Dialister micraerophilus DSM 19965]
Length = 808
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 280/576 (48%), Gaps = 67/576 (11%)
Query: 21 QKLLNQT-SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+KLLN+T +A + + + + +I+ IL A L P E V ++ N ++
Sbjct: 68 EKLLNETENACICITEETSTPIGETHNISFILEKAKKRICLIPEECIDVLSSIETYNKMY 127
Query: 80 KKLTEAAELDGDSLQRYS----PLLELLKNCN-FLTELEEKIGFCIDCKLLIILDRASED 134
L LQ S PL EL+++ TE E I+ K L + ++
Sbjct: 128 NYFIGERNLKYPYLQVISNEIVPLNELVEDMKKVFTESGE-----INKKASSKLAQIYKE 182
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
E+I+ +R + +L+ + F +IT+R R + +K S KY DGI
Sbjct: 183 KEIIKNRIRREFQ---RILQDSKYETF----FQDRIITQRNGRYVIPVKESFKYKF-DGI 234
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SS+G T FMEP +V NN L +E E IL +T I +S IK D+
Sbjct: 235 VHDSSSTGQTLFMEPLFSVHLNNDLTELEVAEKKEIKLILESVTNSIRESADIIKNNCDK 294
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ FAR A M + ++ +S + I + KHPL+L
Sbjct: 295 ATLLEFIFARGNLALSMK------AKRAALSDGTEIKLINAKHPLIL------------- 335
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
D VPI ++ ++++ITG N GGKT +MKT GL
Sbjct: 336 ----------------------KDKVVPISFEIGKNYKIMIITGANAGGKTIAMKTAGLF 373
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+M++ GL++PA LP F I A IGD QS++ NLSTFS +I+++ L S++ L
Sbjct: 374 CMMNQCGLFIPADEGSVLPVFKNIYAIIGDEQSIQNNLSTFSAYITQLSSFLHKASKKDL 433
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+GSGTDP EG ALA S+ +YL D+ ++++T+H++++ L + NA EF
Sbjct: 434 ILLDELGSGTDPVEGAALAQSVTEYLSDKGIVSIITSHFSEMKKLAYEKEGILNAFVEFD 493
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER---LRPERQQHRKSELY 551
+TL PTY ++ G G+SNA NI K G I++RA +L E+ E+ R +
Sbjct: 494 EKTLMPTYNLILGVAGNSNAFNICKRFGIPEFILERALELKEKSSLYNVEKIMERLNCEI 553
Query: 552 QSLMEERRKLESQARTA----ASLHAEIMDLYREDS 583
+S+ +ER+ L++ A +L E+ + Y++ +
Sbjct: 554 RSVEKERKDLKNSIDEADKLKLNLQNEVENFYKKKA 589
>gi|402310174|ref|ZP_10829142.1| MutS2 family protein [Eubacterium sp. AS15]
gi|400369416|gb|EJP22416.1| MutS2 family protein [Eubacterium sp. AS15]
Length = 785
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 279/577 (48%), Gaps = 65/577 (11%)
Query: 3 HAVVQKAQIPFGKSLEESQK-----LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVS 56
+A+ + A+ GK +++ LL QTS A M+ ++ + +I D+ A
Sbjct: 21 YAISENAKDKIGKLKPSTRREVIELLLEQTSEAQKMIVTKGAIPFGSIYDVRLKAKKASI 80
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS--PLLELLK-NCNFLTELE 113
G +L + V+ TLR A + ++++ P++ + N +E
Sbjct: 81 GSILDAKSLIKVKETLRT-----------ARISKSYVEQFEDIPVISSISDNIRVSKSIE 129
Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
++I I + I D AS +L IR + +++ + L ++ A + ++T
Sbjct: 130 DEIERAIISETEI-SDDASTELRRIRRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTV 188
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +K+ ++ P GI + SSSGAT F+EP V NN L E E I
Sbjct: 189 RNDRFVLPVKSENRDQFP-GIVHDTSSSGATMFIEPMAIVNMNNHLSALKQEEYREIERI 247
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L+ LT+ + + EI Y + + E+D A+ + MD + P ++ +V F ++
Sbjct: 248 LAYLTSIVGEFSEEIIYDCEMLEELDFIMAKGKLSVSMDAIEPKINQDKYVRFVNA---- 303
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+HPL+ K V +S + +G
Sbjct: 304 --RHPLIE-----------------KDKVVSSTIEIGK------------------SYTT 326
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
+VITGPNTGGKT ++KTLGL +M + GL++P F+ I ADIGD QS+ Q+LS
Sbjct: 327 LVITGPNTGGKTVTLKTLGLLCIMLQCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLS 386
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H++ IV I+ V SLVL DE+G+GTDP EG LA SIL L+++ L TTHY
Sbjct: 387 TFSAHMTNIVGIMNEVDENSLVLFDELGAGTDPVEGAGLAISILDTLKEKDILTAATTHY 446
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
++L + NA+ EF + TL PTYR++ G G SNA I++ +G + IIQRA+
Sbjct: 447 SELKNYALTVDKVTNASVEFDVNTLSPTYRLIIGIPGKSNAFEISQKLGLSKDIIQRARD 506
Query: 534 LV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
+ E ++ E + ++ E++++LE + A
Sbjct: 507 TIHTESIKVEDVITKLDKIKNEYEEKKQRLEKELEDA 543
>gi|350567081|ref|ZP_08935686.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
gi|348659744|gb|EGY76471.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
Length = 766
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 233/443 (52%), Gaps = 51/443 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKAS 185
I D AS+ L IR + + DS+ +++++ I + ++T R R + +K
Sbjct: 148 IADSASQKLSSIRRQISKKK---DSIRERLSSMISSGSEYLQDAIVTIREGRYVIPVKNE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
HK + GI +VSSS T ++EP V NN L E E IL +++ +
Sbjct: 205 HKSKVK-GIVHDVSSSKQTVYIEPLAVVNINNELRSLEVEEREEIERILQEISSRVDDVR 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
EI D + EID FA+ + DG PI++ + +V N++ +HPLL +
Sbjct: 264 HEILLNQDLLREIDFIFAKGKLSLEYDGRKPIINDKGYV------NLKSARHPLLDKKKV 317
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
VPIDI + E ++ITGPNTGGKT
Sbjct: 318 -----------------------------------VPIDISLGGEFTSLIITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
S+KTLGL +LM++ GL++P + + FD +LADIGD QS+EQ+LSTFS H+ IV+I
Sbjct: 343 VSIKTLGLLTLMAQYGLHIPTMENSEIAIFDKVLADIGDEQSIEQSLSTFSSHMVNIVEI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ ++ +SLV+ DE+G+GTDP+EG ALA SI+ ++ R + TTHY L
Sbjct: 403 LKEITPKSLVIFDELGAGTDPTEGAALARSIMDFMLRRKIRCISTTHYNQLKLYALSTDG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
+NA+ EF+++TL PTY++L G G SNA I++ +G II+ A+K++ E +
Sbjct: 463 VQNASMEFNVDTLSPTYKLLIGVPGKSNAFEISRKLGLPDIIIRDAKKMISEDNIEFE-- 520
Query: 546 RKSELYQSLMEERRKLESQARTA 568
E+ S+ ++R ++E + A
Sbjct: 521 ---EVLSSIEKDRTRIEEYKQAA 540
>gi|191637667|ref|YP_001986833.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|385819398|ref|YP_005855785.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|385822563|ref|YP_005858905.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|409996521|ref|YP_006750922.1| MutS2 protein [Lactobacillus casei W56]
gi|238693020|sp|B3WC74.1|MUTS2_LACCB RecName: Full=MutS2 protein
gi|190711969|emb|CAQ65975.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|327381725|gb|AEA53201.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|327384890|gb|AEA56364.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|406357533|emb|CCK21803.1| MutS2 protein [Lactobacillus casei W56]
Length = 786
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 186/629 (29%), Positives = 302/629 (48%), Gaps = 76/629 (12%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTE-AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ K+ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGKIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQVIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREDSTSAS 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ +T
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTERD 564
Query: 588 ISVYRYQFAVTSTLSKVDFDAIPNIDQCK 616
+ + + S + K A I Q +
Sbjct: 565 AQLQQAKDKANSLVDKAQTKADKIIKQLR 593
>gi|312902246|ref|ZP_07761455.1| MutS domain V [Enterococcus faecalis TX0635]
gi|422689054|ref|ZP_16747167.1| MutS domain V [Enterococcus faecalis TX0630]
gi|422730726|ref|ZP_16787112.1| MutS domain V [Enterococcus faecalis TX0645]
gi|310634384|gb|EFQ17667.1| MutS domain V [Enterococcus faecalis TX0635]
gi|315163239|gb|EFU07256.1| MutS domain V [Enterococcus faecalis TX0645]
gi|315577950|gb|EFU90141.1| MutS domain V [Enterococcus faecalis TX0630]
Length = 630
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 254/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P V+ + ++I KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITP------KVNKEERLHIVQGKHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDYFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|424757031|ref|ZP_18184808.1| MutS domain V protein [Enterococcus faecalis R508]
gi|402407696|gb|EJV40204.1| MutS domain V protein [Enterococcus faecalis R508]
Length = 637
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 256/522 (49%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + +++++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQDIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|229018688|ref|ZP_04175540.1| DNA mismatch repair protein [Bacillus cereus AH1273]
gi|229024930|ref|ZP_04181360.1| DNA mismatch repair protein [Bacillus cereus AH1272]
gi|228736402|gb|EEL86967.1| DNA mismatch repair protein [Bacillus cereus AH1272]
gi|228742576|gb|EEL92724.1| DNA mismatch repair protein [Bacillus cereus AH1273]
Length = 633
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/559 (28%), Positives = 279/559 (49%), Gaps = 80/559 (14%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEYKSIEEEINFSIKGNS--IDAAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSTNKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLNGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERL------RPER 542
ETL P Y+++ G +G+SNAL IA + ++QRA++ +E++ +P+
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLQRAKEYMGNKEYAIEKVNESKIRKPKM 527
Query: 543 QQHRKSELYQSLMEERRKL 561
Q ++ Y+ + +R L
Sbjct: 528 VQEKRENHYEYKIGDRVNL 546
>gi|390956087|ref|YP_006419844.1| mismatch repair ATPase [Terriglobus roseus DSM 18391]
gi|390411005|gb|AFL86509.1| mismatch repair ATPase (MutS family) [Terriglobus roseus DSM 18391]
Length = 818
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 216/409 (52%), Gaps = 31/409 (7%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+ D AS +L IR R + ++ L++ + AGG + LIT R R + +KA
Sbjct: 155 LADSASPELARIRKAMDRQHKAIEESLRRQLRAVSDAGGTQEDLITIRGERFVIPVKAEF 214
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ +P G+ SSSG T F+EP +EFNN VRL + E +E IL +T + +
Sbjct: 215 RRKVP-GVIHGSSSSGQTVFVEPMETIEFNNELVRLMDEEQSEIHRILISMTQAVGEQAG 273
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ + + E++ FA A FAQ +D V PI + D+++++E +HP+L
Sbjct: 274 SLSRGTEVLAEVEAHFAYAKFAQDLDCVRPIFTDGKPHGDDAALSLEAARHPML------ 327
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
L+ E +++ VP+ + + + ++I+GPNTGGKT
Sbjct: 328 ----------ELRMRSEKAKI-------------VPLTLGLPGVAKQLIISGPNTGGKTV 364
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM++AGL +PAK RLP F + ADIGD QS+E+NLSTFS HIS + I
Sbjct: 365 ALKTVGLLALMAQAGLPVPAK-LARLPIFAAVYADIGDAQSIERNLSTFSAHISHVNQIA 423
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
SLVL+DE+GS TDP EG ALA +I + +++TTH L K
Sbjct: 424 READPRSLVLLDELGSATDPEEGAALAVAISERFLTMGAWSMITTHLTSLKIYAAKHDGV 483
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
NAA F TL PTY + G G S+ +NIA+ +G D +I A+ V
Sbjct: 484 VNAAVGFDERTLAPTYELRMGVPGASSGINIAERLGLDAGMISAARASV 532
>gi|255974393|ref|ZP_05424979.1| DNA mismatch repair protein MutS [Enterococcus faecalis T2]
gi|255967265|gb|EET97887.1| DNA mismatch repair protein MutS [Enterococcus faecalis T2]
Length = 637
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 256/522 (49%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L+ G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLHQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|335356987|ref|ZP_08548857.1| DNA mismatch repair protein [Lactobacillus animalis KCTC 3501]
Length = 786
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 251/488 (51%), Gaps = 62/488 (12%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L+ E+ + + LR+ N V + A D + L EL + L +L +++
Sbjct: 81 GATLNGKELAEISQVLRSANEVHRFFMALA----DEKVELNYLYELEEQLETLPQLAKRL 136
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----IT 172
++ + D +S L+R+ R++ ++ ++ A G K L +T
Sbjct: 137 QVSLEADGYVTDDASS----LLRSLRRQISTTEATIRNRLVA--LTRGNNAKYLSGANVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + ++A HK GI + SSSG TYF+EP+ VE NN RL ++AE+
Sbjct: 191 IRNDRYVIPVRAEHKGKF-GGIVHDQSSSGQTYFIEPREIVELNN---RLKQEQVAEKEE 246
Query: 233 ILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL +L + E E+ + + E D A+A +A+ + P+LS Q
Sbjct: 247 ILRILRELSEETMPYTAELAHDAKILGEFDFINAKAKYAKELKATQPLLSEQK------D 300
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I + + HPLL EM D V DI +
Sbjct: 301 IYLRQVWHPLL-------------------------EM----------DKAVKNDIILGK 325
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + +VITGPNTGGKT ++KTLGL +M ++GL++PA + R+ F I ADIGD QS+E
Sbjct: 326 DYQAMVITGPNTGGKTITLKTLGLVQMMGQSGLFIPAFENSRIGVFKDIFADIGDEQSIE 385
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV+ILE V ++SLVL DE+G+GTDP EG ALA +IL + +
Sbjct: 386 QSLSTFSSHMTNIVNILEHVDQDSLVLFDELGAGTDPQEGAALAIAILDAIGASGAYVLA 445
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + T+ NA+ EF+ ETLRPTYR+L G G SNA NI++ +G + I+
Sbjct: 446 TTHYPELKTYGFERTQTINASMEFNEETLRPTYRLLIGIPGQSNAFNISERLGLSQTIVA 505
Query: 530 RAQKLVER 537
A+ LV +
Sbjct: 506 AARNLVAK 513
>gi|429204941|ref|ZP_19196222.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146803|gb|EKW99038.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 786
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 220/431 (51%), Gaps = 72/431 (16%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
++T R R + ++ ++ G+ + S+SG T F+EPK VE NN R ++E E
Sbjct: 188 IVTIRNDRYVIPVRQEYRNKF-GGVVHDQSASGQTVFVEPKAIVELNNRLKRQQSAEREE 246
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+A IA E++ + ++D A+A +A + PI+ + D++
Sbjct: 247 VKRILAELSALIAPYTEELQANAHIIGQLDFVNAKARYAHAIKATEPIIDT------DNN 300
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+ + + HPLL+ P K+ V N DI +
Sbjct: 301 VYLRQVWHPLLV---------------PQKA-VRN-------------------DIMLGK 325
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + ++ITGPNTGGKT ++KTLGL +M ++GL++PA R+ F I ADIGD QS+E
Sbjct: 326 DYQAIIITGPNTGGKTITLKTLGLVQMMGQSGLFIPAYEESRIGIFTDIFADIGDEQSIE 385
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFS H+ IV+IL+ + SLVL DE+G+GTDP EG +LA +IL + V
Sbjct: 386 QNLSTFSSHMVNIVNILQHIDAHSLVLFDELGAGTDPQEGASLAIAILDAVGATGAYVVA 445
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + NA+ EF +ETL+PTYR+L G G SNA NI++ +G D II
Sbjct: 446 TTHYPELKAYGFERPGTINASMEFDVETLQPTYRLLLGIPGRSNAFNISRRLGLDETIIA 505
Query: 530 RAQKL-----------VERLRPERQQ-------------------HRKSELYQSLMEERR 559
AQ+L + L +R Q H ++ Y+ L+ ER
Sbjct: 506 AAQELTTQDSQDLNAMITDLVAKRHQAEEEAIALQKHLEEAEKLHHDLAQAYEKLVAERS 565
Query: 560 KLESQARTAAS 570
L QA+ A+
Sbjct: 566 HLTEQAKMKAN 576
>gi|357147017|ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium
distachyon]
Length = 833
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 288/574 (50%), Gaps = 64/574 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E S++LL +T AA+ ++ + D S ++ + + G ++ E AV
Sbjct: 79 SYERSRRLLQETEAAVRLLGTSGGSFDFSGLDTVTVEAAIQCVSGGSVIKGQEAMAVVSL 138
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A D +S PL E + L + I ID + D A
Sbjct: 139 MLFVESLQVTIRAAMRQDEESHNLLMPLTETILEAVVNKSLVKSIQDIIDDDG-SVKDTA 197
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL--ITKRRSRMCVGIKASHKYL 189
S +L R + +++L+S L ++ ++ + + L ++ R C+ + K L
Sbjct: 198 SPELRRYREQ----VQSLESRLCQLMDRLIRNSDSEASLSEVSIVNGRCCIKVTGD-KSL 252
Query: 190 LPDGIALNVS-----SSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAK 243
DG+ L+ S A +EP AV N+ E++ + + +A E LS LT +I
Sbjct: 253 SFDGLLLSRCVYXRCGSDAGSMIEPIVAVPLND-ELQGARALVARAELDALSKLTDKILL 311
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL------------SSQSHVSFDSS-- 289
I+ L+ + +D ARA ++ DG P L ++ VS SS
Sbjct: 312 ELDNIQILLQETITLDKVTARAKYSIAYDGTLPDLYLPKFEHETVNTATDWPVSATSSAQ 371
Query: 290 -------INIEGIKHPLLLGSSLRSL-----SAASSNS---------------NPLKSDV 322
+ I HPLLL +L AS+ + + L SD+
Sbjct: 372 LPKKPWKVFIPNAFHPLLLQQHQENLRRIKKDVASATAEIRRRRIYGQDIAEEDQLASDL 431
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
++ + V L + + P+P+D + ET V+VITGPNTGGKT S+KT+GLASLM+K GL
Sbjct: 432 DSMKNRVSKLER---NHPIPVDFMIGEETTVLVITGPNTGGKTISLKTVGLASLMAKIGL 488
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
Y+ A ++PWFD + ADIGD QSL Q+LSTFSGH+ +I I + +SLVL+DE+G+
Sbjct: 489 YILASEPVKIPWFDAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAQSTSQSLVLLDEVGA 548
Query: 443 GTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
GT+P EG AL S+L+ + L + TTH+ +L LK + FENA EF E L+PT
Sbjct: 549 GTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNDSFENACVEFDEENLKPT 608
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
+RILWG G SNA+NIA+ +G II+ A+ L+
Sbjct: 609 FRILWGIPGRSNAINIAERLGLPLDIIESARHLL 642
>gi|229548166|ref|ZP_04436891.1| DNA mismatch repair protein MutS [Enterococcus faecalis ATCC 29200]
gi|229306645|gb|EEN72641.1| DNA mismatch repair protein MutS [Enterococcus faecalis ATCC 29200]
Length = 630
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 254/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P V+ + ++I KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITP------KVNKEERLHIVQGKHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|168049630|ref|XP_001777265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671367|gb|EDQ57920.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 916
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 148/199 (74%), Gaps = 4/199 (2%)
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
PVPID++V ET+VV ITGPNTGGKTA++KT+GLA+LM+K+GL++ LPWFD +L
Sbjct: 542 PVPIDVRVVGETKVVAITGPNTGGKTATIKTVGLAALMAKSGLFVLGIEPVVLPWFDAVL 601
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ- 458
ADIGD QSL Q+LSTFSGH+ RI I E+ + SLVL+DE+G+GTDP+EG AL ++L+
Sbjct: 602 ADIGDEQSLSQSLSTFSGHLRRIKRIKEVSTGSSLVLLDEVGAGTDPTEGAALGMALLES 661
Query: 459 YLRDRVG---LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
+ + G L + TTH+ +L LK D+RFENA+ EFS E LRPTY++LWG G SNA+
Sbjct: 662 FAQSGKGGSYLTMATTHHGELKTLKYSDSRFENASVEFSEEKLRPTYKLLWGIPGRSNAI 721
Query: 516 NIAKSIGFDRKIIQRAQKL 534
NIA+ +G + I+ A+ L
Sbjct: 722 NIAERLGVPKDILDEARTL 740
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 6 VQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAV-------- 55
+Q +IP + E S+ LL TSA + + P +L G+L + V
Sbjct: 151 LQVLEIPATR--EASEALLELTSAGVEFISLLGGPFEL-------GVLRTQVVKDCILRI 201
Query: 56 -SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEE 114
G ++S E AV L+ NV ++++ A+ D P+++++ +
Sbjct: 202 RKGMVVSGVEALAVAMLLQTSGNVRRQVSNTAQEFQDRQSVLEPIVDMVGPLKYFRGHAA 261
Query: 115 KIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
I ID + + D AS +L R + + + L L K++ + I +
Sbjct: 262 TI---ID-EDGTVKDSASPELRKARIQERSVEQRLRELFNKISRD--KGANIQSEEVVLV 315
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAI 233
RMC+ + + ++ +P G+ L S SGAT ++EP GAV NN ++ + +E+A+ E +
Sbjct: 316 DGRMCLVVASDNRSNVP-GLLLR-SGSGATSYIEPAGAVPLNN-KLSEARAEVAKAEYNV 372
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---SSQSHVSFDSSI 290
LS LT ++ +I++ ++ ++ +D+ ARA ++ W+ P SQS V +
Sbjct: 373 LSRLTDQLRPYLDDIQFCLNIIVRLDVIMARARYSTWLGATKPTFIDTESQSLV----RL 428
Query: 291 NIEGIKHPLLL 301
+ +HPLL+
Sbjct: 429 QLRRARHPLLV 439
>gi|423522691|ref|ZP_17499164.1| MutS2 family protein [Bacillus cereus HuA4-10]
gi|401174627|gb|EJQ81835.1| MutS2 family protein [Bacillus cereus HuA4-10]
Length = 633
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 287/578 (49%), Gaps = 66/578 (11%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + KK
Sbjct: 47 LNETTEARAIVDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKI-KKF 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E L Y+ + K+ +EE+I F I I AS++L+ IR
Sbjct: 106 MLDKEFFAPVLSSYANSMSEFKS------IEEEINFSIKGNS--IDAAASKELKRIR--- 154
Query: 143 KRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
N++++D +K+ + + I + I+K+ R + IK+++K + I +
Sbjct: 155 -NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSTYKNQVAGSI-VEA 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ + +
Sbjct: 213 SAKGSTVFIEPHTVTKLNAELASLKAEEAMEEYQILATLSGMVLENIYHIKINMELISQY 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 273 DMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV-------------- 312
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP++ ++ R ++ITGPN GGKT +KT+GL +L +
Sbjct: 313 ----------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLTLAT 350
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+L D
Sbjct: 351 MSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLLLFD 410
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
EIGSGT+P+EG ALA SIL+ + + +THY ++ + F NAA +F+ ETL
Sbjct: 411 EIGSGTEPNEGAALAISILEEFYLAGCITIASTHYGEIKRFSEMHGDFMNAAMQFNSETL 470
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ-SLMEE 557
P Y+++ G +G+SNAL IA + +++RA++ + ++ +S++ + ++E
Sbjct: 471 EPLYKLVIGKSGESNALWIANKMNVKEHVLKRAKEYMGNKEYAIEKVNESKIRKPKFVQE 530
Query: 558 RRKLESQARTAASL----HAEIMDLYREDSTSASISVY 591
+R+ + + + + H + +Y+E ++ VY
Sbjct: 531 KRENDYEYKIGDRVNLLDHNDFGIVYKEKDNFYNVVVY 568
>gi|307281839|ref|ZP_07562055.1| MutS domain V [Enterococcus faecalis TX0860]
gi|306503870|gb|EFM73091.1| MutS domain V [Enterococcus faecalis TX0860]
Length = 673
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 256/522 (49%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L+ G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLHQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|114566635|ref|YP_753789.1| recombination and DNA strand exchange inhibitor protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337570|gb|ABI68418.1| recombination and DNA strand exchange inhibitor protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 782
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 259/525 (49%), Gaps = 74/525 (14%)
Query: 24 LNQTSAAL-AMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L++T A+ AM S+P L ++ + L G +LSP+ + + L + V K
Sbjct: 49 LDETGEAMEAMRFSEPAFLYGLKLVDSQLAKVKVGGILSPAGLREIYHILNSSRQVQKLF 108
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE- 141
+Y L L + LE +I + + + D AS +L+ +R +
Sbjct: 109 AAG---------KYPRLFYLSSKIAEVKGLENEINNAVSEEAEL-KDDASPELKSLRGQI 158
Query: 142 ---RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R R L ++ Q + + L+T+R R V I+ ++ + GI +
Sbjct: 159 NTLRLRIRNYLQEFIRSPDTQKW----LQDSLVTEREGRYVVPIRQEFRHEV-RGIIHDE 213
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+SGAT F+EP VE NN L E E IL L+ + + EI + + E
Sbjct: 214 SASGATVFIEPAAVVENNNRIRALQREEKREVERILRKLSEAVGQYRVEIAGNQEILSEF 273
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI------KHPLLLGSSLRSLSAAS 312
D +ARA A D P IN GI +HPLL +
Sbjct: 274 DFIYARARLAYQGDYYRP------------EINARGILEISRGRHPLLGQDA-------- 313
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VP+DI++ + V+VITGPNTGGKT ++KT+G
Sbjct: 314 ----------------------------VPLDIRLGSDFDVLVITGPNTGGKTVALKTVG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+ +GL++PA+ + R+ F + DIGD QS+EQ+LSTFS H++ I+ ILE +E
Sbjct: 346 LLTLMALSGLFIPARENSRISVFKKLFVDIGDEQSIEQSLSTFSSHMTNIIAILEKADKE 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA IL+ L + ++TTH ++L + R +NA+ E
Sbjct: 406 SLVLMDEVGAGTDPAEGAALARVILEELMRKCSRVILTTHQSELKYFAYQRERVKNASVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
F+ +L+PTY++ G G SNAL IA +G +++Q+A++L+ R
Sbjct: 466 FNPVSLQPTYKLSIGMPGQSNALEIASRLGLKTELVQQARQLLPR 510
>gi|228986574|ref|ZP_04146707.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773145|gb|EEM21578.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 633
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 264/520 (50%), Gaps = 67/520 (12%)
Query: 24 LNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ A A++ ++ + I +IA + G +L P E+ +V LR + K +
Sbjct: 47 LNETTEARAILDAEGHVPFFGISNIASTIQKLEKGMILDPEELVSVSDFLRGCRKIKKFM 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + ++P+L N +TE +EE+I F I I AS++L+ IR
Sbjct: 107 LDK--------EFFAPVLASYANS--MTEFKSIEEEINFSIKGNS--IDSAASKELKRIR 154
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
N++++D +K+ + + I + I+K+ R + IK+S+K + I
Sbjct: 155 ----NNIDSVDGKIKERLTKFLNSSANKKYIQEFFISKKDDRYTIPIKSSYKNQVAGSI- 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G+T F+EP + N L E EE IL+ L+ + ++ IK M+ +
Sbjct: 210 VEASAKGSTVFIEPHTVTKLNVELASLKAEEAMEEYQILATLSGMVVENIYHIKINMELI 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ D+ FA+A F++ +DG+ P L+ + I++ KHPLL G
Sbjct: 270 SQYDMVFAKAKFSKSIDGIEPKLNDHGY------IHLVNCKHPLLSGKV----------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP++ ++ R ++ITGPN GGKT +KT+GL +
Sbjct: 313 -------------------------VPLNFEIGQNYRSLIITGPNAGGKTIVLKTIGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
L + +GL++ + F+ + DIGD+QS+E LSTFS H+ + +I+ + + +L+
Sbjct: 348 LATMSGLHIAGDKETEIAIFENVFVDIGDNQSIENALSTFSSHMKNLSEIMRMSNNNTLL 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DEIGSGT+P+EG ALA SIL+ + V +THY ++ + F NAA +F+
Sbjct: 408 LFDEIGSGTEPNEGAALAISILEEFYLAGCITVASTHYGEIKRFSEMHDDFMNAAMQFNS 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
ETL P Y+++ G +G+SNAL IA + +++RA++ +
Sbjct: 468 ETLEPLYKLVIGKSGESNALWIANKMNVREHVLKRAKEYM 507
>gi|363893691|ref|ZP_09320786.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
gi|361963493|gb|EHL16565.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
Length = 785
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 215/410 (52%), Gaps = 42/410 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L + + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ IN +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKL---INA---RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILEKLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIK 509
>gi|313891483|ref|ZP_07825096.1| MutS2 family protein [Dialister microaerophilus UPII 345-E]
gi|313120060|gb|EFR43239.1| MutS2 family protein [Dialister microaerophilus UPII 345-E]
Length = 808
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 279/576 (48%), Gaps = 67/576 (11%)
Query: 21 QKLLNQT-SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+KLLN+T +A + + + + +I+ IL A L P E V ++ N ++
Sbjct: 68 EKLLNETENACICITEETSTPIGETHNISFILEKAKKRICLIPEECIDVLSSIETYNKMY 127
Query: 80 KKLTEAAELDGDSLQRYS----PLLELLKNCN-FLTELEEKIGFCIDCKLLIILDRASED 134
L LQ S PL EL+++ TE E I+ K L + ++
Sbjct: 128 NYFIGERNLKYPYLQVISNEIVPLNELVEDMKKVFTESGE-----INKKASSKLAQIYKE 182
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
E+I+ +R + +L+ + F +IT+R R + +K S KY DGI
Sbjct: 183 KEIIKNRIRREFQ---RILQDSKYETF----FQDRIITQRNGRYVIPVKESFKYKF-DGI 234
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SS+G T FMEP +V NN L +E E IL +T I +S IK D+
Sbjct: 235 VHDSSSTGQTLFMEPLFSVHLNNDLTELEVAEKKEIKLILESVTNSIRESADIIKNNCDK 294
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ FAR A M LS + + ++ KHPL+
Sbjct: 295 ATLLEFIFARGNLALSMKAKRAALSDGTEIKLINA------KHPLI-------------- 334
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
SK D VPI ++ ++++ITG N GGKT +MKT GL
Sbjct: 335 ------------------SK---DKVVPISFEIGKNYKIMIITGANAGGKTIAMKTAGLF 373
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+M++ GL++PA LP F I A IGD QS++ NLSTFS +I+++ L S+E L
Sbjct: 374 CMMNQCGLFIPADEGSVLPVFKNIYAIIGDEQSIQNNLSTFSAYITQLSSFLHKASKEDL 433
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+GSGTDP EG ALA S+ +YL D+ ++++T+H++++ L + NA EF
Sbjct: 434 ILLDELGSGTDPVEGAALAQSVTEYLSDKGIVSIITSHFSEMKKLAYEKEGILNAFVEFD 493
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER---LRPERQQHRKSELY 551
+TL PTY ++ G G+SNA NI K G I++RA +L E+ E+ R +
Sbjct: 494 EKTLMPTYNLILGVAGNSNAFNICKRFGIPEFILERALELKEKSSLYNVEKIMERLNGEI 553
Query: 552 QSLMEERRKLESQARTA----ASLHAEIMDLYREDS 583
+S+ +ER+ L++ A +L E+ + Y++ +
Sbjct: 554 RSVEKERKDLKNSIDEADKLKLNLQNEVENFYKKKA 589
>gi|255970818|ref|ZP_05421404.1| DNA mismatch repair protein MutS [Enterococcus faecalis T1]
gi|256958256|ref|ZP_05562427.1| DNA mismatch repair protein MutS [Enterococcus faecalis DS5]
gi|257078432|ref|ZP_05572793.1| DNA mismatch repair protein MutS [Enterococcus faecalis JH1]
gi|257080615|ref|ZP_05574976.1| DNA mismatch repair protein MutS [Enterococcus faecalis E1Sol]
gi|257417834|ref|ZP_05594828.1| DNA mismatch repair protein mutS [Enterococcus faecalis T11]
gi|294779242|ref|ZP_06744648.1| MutS domain V [Enterococcus faecalis PC1.1]
gi|300860999|ref|ZP_07107086.1| MutS domain V protein [Enterococcus faecalis TUSoD Ef11]
gi|384516785|ref|YP_005704090.1| mutS domain V family protein [Enterococcus faecalis 62]
gi|397701125|ref|YP_006538913.1| mutS domain V family protein [Enterococcus faecalis D32]
gi|421513842|ref|ZP_15960591.1| Clostridial MutS2-related protein [Enterococcus faecalis ATCC
29212]
gi|255961836|gb|EET94312.1| DNA mismatch repair protein MutS [Enterococcus faecalis T1]
gi|256948752|gb|EEU65384.1| DNA mismatch repair protein MutS [Enterococcus faecalis DS5]
gi|256986462|gb|EEU73764.1| DNA mismatch repair protein MutS [Enterococcus faecalis JH1]
gi|256988645|gb|EEU75947.1| DNA mismatch repair protein MutS [Enterococcus faecalis E1Sol]
gi|257159662|gb|EEU89622.1| DNA mismatch repair protein mutS [Enterococcus faecalis T11]
gi|294453703|gb|EFG22099.1| MutS domain V [Enterococcus faecalis PC1.1]
gi|300850038|gb|EFK77788.1| MutS domain V protein [Enterococcus faecalis TUSoD Ef11]
gi|323478918|gb|ADX78357.1| mutS domain V family protein [Enterococcus faecalis 62]
gi|397337764|gb|AFO45436.1| mutS domain V family protein [Enterococcus faecalis D32]
gi|401673094|gb|EJS79503.1| Clostridial MutS2-related protein [Enterococcus faecalis ATCC
29212]
Length = 637
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|300173772|ref|YP_003772938.1| DNA mismatch repair protein MutS2 [Leuconostoc gasicomitatum LMG
18811]
gi|299888151|emb|CBL92119.1| DNA mismatch repair protein MutS2 [Leuconostoc gasicomitatum LMG
18811]
Length = 801
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 242/474 (51%), Gaps = 49/474 (10%)
Query: 63 SEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDC 122
SEI V R A+ N +K++ A E+ G+SL+ L E + L+++ +I ID
Sbjct: 90 SEIGTVLRNTTAIANFFKQM--ADEIIGESLK---VLPEQAEKLAILSDVTRQIEIAIDA 144
Query: 123 KLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
I D AS DL+ IR + N + S ++ + A + P+IT R R + +
Sbjct: 145 TGRIN-DEASFDLKSIRGKITGNEHAVKSKMQSYT-RGKSAQYLSDPIITIRAERYVLPV 202
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA ++ G+ + S +G T ++EP+ VE NN L E AEE +L +L++ +
Sbjct: 203 KAEYRNQF-GGVVHDQSQTGQTLYIEPQAVVELNNKLSELRVKEQAEEQHVLQILSSALE 261
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
EI ++ + D A+A A +D + P+++ ++HV + HPLL
Sbjct: 262 PYTNEIAQNVNILGHFDFVNAKARLAAQLDAMQPVVNIENHVDLQQAW------HPLL-- 313
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K I+ V DI + + + ++ITGPNTG
Sbjct: 314 ------------------------------DKKIA---VANDITLGDQYKSIIITGPNTG 340
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGL LM+++GL++ K + F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 341 GKTITIKTLGLLQLMAQSGLFITTKRPSTVGVFHEIFADIGDEQSIEQSLSTFSSHMANI 400
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ +++ + SLV+ DE+G+GTDP+EG ALA +IL + G + TTHY +L
Sbjct: 401 ISMIDDIDGNSLVIFDELGAGTDPAEGAALAIAILDKVASLGGYVIATTHYPELKLYGYN 460
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
NA+ F +ETL+PTY+ L G G SNAL IAK +G +I A L +
Sbjct: 461 RPETLNASMVFDVETLKPTYQFLMGVPGQSNALAIAKRLGLGEDVIGAATALTD 514
>gi|355678274|ref|ZP_09060953.1| hypothetical protein HMPREF9469_03990 [Clostridium citroniae
WAL-17108]
gi|354812720|gb|EHE97335.1| hypothetical protein HMPREF9469_03990 [Clostridium citroniae
WAL-17108]
Length = 812
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 261/528 (49%), Gaps = 57/528 (10%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE + QT+ A+ ++ + + + DI L G LS E+ ++ + A
Sbjct: 40 LEEIRTWQAQTTDAVTRVRLKGTTSFAGVRDIRDSLKRLEIGSSLSIPELLSISSNMTAA 99
Query: 76 NNVWKKLTEAAELDG---DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
AE DG D + L L LT L +I CI + + D AS
Sbjct: 100 ARAKAYGRHEAEDDGSRQDGIDTSDSLEPLFAGLEPLTPLNNEIKRCILSEDEVA-DDAS 158
Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L +R K R L+S+L + + A +IT R R C+ +K+ +K
Sbjct: 159 PGLSHVRRSMKVIADRIHTQLNSILNSNRSYLQDA------VITMRDGRYCLPVKSEYKN 212
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ + S++G+T F+EP ++ NN L E E A+L+ L+ + A E+
Sbjct: 213 QV-SGMVHDQSATGSTLFIEPMAIIKLNNEVRELEIQEQKEIEAVLASLSNQAAPFIEEL 271
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + + ++D FA+A A+ P+ +++ I+I+ +HPLL S+
Sbjct: 272 KMNQELLSQLDFIFAKASLARRYKCSAPVFNNRGF------IHIKDGRHPLLNPQSV--- 322
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPI++ + + ++++TGPNTGGKT S+
Sbjct: 323 --------------------------------VPINVWLGKDFDLLIVTGPNTGGKTVSL 350
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM ++GL++PA L FD + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 351 KTVGLFTLMGQSGLHIPAWEGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNIVRILSE 410
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL L DE+G+GTDP+EG ALA +IL +L + + TTHY++L EN
Sbjct: 411 ADARSLCLFDELGAGTDPTEGAALAIAILSFLHNMKCRTMATTHYSELKVFALGTQGVEN 470
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
A EF++ETL+PTYR+L G G SNA I+K +G II+ A+ +E
Sbjct: 471 ACCEFNVETLQPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKNHLE 518
>gi|256854648|ref|ZP_05560012.1| MutS2 family protein [Enterococcus faecalis T8]
gi|256710208|gb|EEU25252.1| MutS2 family protein [Enterococcus faecalis T8]
Length = 637
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|422706200|ref|ZP_16763903.1| MutS domain V [Enterococcus faecalis TX0043]
gi|315156435|gb|EFU00452.1| MutS domain V [Enterococcus faecalis TX0043]
Length = 673
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|422737077|ref|ZP_16793332.1| MutS domain V [Enterococcus faecalis TX2141]
gi|315145955|gb|EFT89971.1| MutS domain V [Enterococcus faecalis TX2141]
Length = 673
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 259/530 (48%), Gaps = 53/530 (10%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
A++ LE Q L +T+ A ++ S Q + + I +L G +L+P+E+
Sbjct: 68 AKMVLATRLETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIE 127
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
V LR+ + +K E + L YS L +F +EE+I I + +
Sbjct: 128 VADFLRSSQRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--V 178
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
AS L +R + + +++ + K I + ++ K+ V IKAS+K
Sbjct: 179 ATDASRQLRKMRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYK 238
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ G + S+ G T F+EP + N L E AEE IL+ LT I + ER
Sbjct: 239 NKV-SGTIIEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERL 297
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ +D + +D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 298 VDQAVDTMTTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL------ 345
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ VP+ + E R +VITG N GGKT
Sbjct: 346 ------------------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVV 375
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL ++M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L
Sbjct: 376 LKTVGLLTVMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLR 435
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V R +LVL+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F
Sbjct: 436 NVKRHTLVLLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFV 495
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+AA F ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 496 SAAMAFDRETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|295692997|ref|YP_003601607.1| muts family protein [Lactobacillus crispatus ST1]
gi|295031103|emb|CBL50582.1| MutS family protein [Lactobacillus crispatus ST1]
Length = 571
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 269/526 (51%), Gaps = 64/526 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+L + ++LLN+T A+ +++ Q + ++ EDI ++ A G +L+P ++ V LR
Sbjct: 40 NLHKVEQLLNETEEAVKILKLRQHIPFASSEDIEHLITKAEKGLILTPDDLEKVAEFLR- 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
VN + ++ E + +PLL +++ L ++E+ I I+ + D A
Sbjct: 99 VNRLLQRFLARHE-------QLAPLLNAYVQDMTLLPDIEDAIYTTIEHGQ--VCDEADR 149
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
+L +R + K+++ L + L I +I ++ + IKA++K L G
Sbjct: 150 ELAKMRRDLKKSVTELKTALNHFLTSKPNQKMIRDAMIVEKEGYATIPIKANYKNQL-SG 208
Query: 194 IALNVSSSGATYFMEPKGAVEFN----NMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ VS+ G T + +P V N N++ ++ N E+A IL LTA+I + +IK
Sbjct: 209 TIVAVSNGGQTVYFQPAKVVRLNQQITNLKAQIRNLELA----ILGALTAKIYDVKDDIK 264
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + +D+ FAR FAQ + + P ++ ++S+ + ++HPL++
Sbjct: 265 RNIELITLLDMIFARGKFAQKYNCIRP------KINRENSLVLRAVRHPLIIN------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
PVP+ +++ E V++ITGPN GGKT ++K
Sbjct: 312 ------------------------------PVPLTLELTQENSVLMITGPNAGGKTVALK 341
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T GL LM++ GL+LP+ +P D + IGDHQ L+ +LSTFS + I I +
Sbjct: 342 TTGLMILMTELGLFLPSDKPCDIPLMDDVFTLIGDHQDLDNSLSTFSAEMKDIAMITKYA 401
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL+DE+G+GTDP+EG ALA ILQ L R L + TTHY+ + + F A
Sbjct: 402 QFHSLVLLDELGTGTDPNEGSALAIGILQELYLRGCLIMATTHYSSIKDFAKQHDGFITA 461
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
A +F L+ L+PTY++ GS G+S AL IAK G ++ +A+ ++
Sbjct: 462 AMDFDLKNLQPTYKLKIGSIGNSRALWIAKKSGIPENVLHQAEAIL 507
>gi|229546299|ref|ZP_04435024.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1322]
gi|422686302|ref|ZP_16744501.1| MutS domain V [Enterococcus faecalis TX4000]
gi|229308580|gb|EEN74567.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1322]
gi|315029005|gb|EFT40937.1| MutS domain V [Enterococcus faecalis TX4000]
Length = 673
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|257420548|ref|ZP_05597538.1| MutS2 family protein [Enterococcus faecalis X98]
gi|257162372|gb|EEU92332.1| MutS2 family protein [Enterococcus faecalis X98]
Length = 637
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|256761191|ref|ZP_05501771.1| DNA mismatch repair protein MutS [Enterococcus faecalis T3]
gi|256960335|ref|ZP_05564506.1| DNA mismatch repair protein MutS [Enterococcus faecalis Merz96]
gi|256962826|ref|ZP_05566997.1| DNA mismatch repair protein MutS [Enterococcus faecalis HIP11704]
gi|256682442|gb|EEU22137.1| DNA mismatch repair protein MutS [Enterococcus faecalis T3]
gi|256950831|gb|EEU67463.1| DNA mismatch repair protein MutS [Enterococcus faecalis Merz96]
gi|256953322|gb|EEU69954.1| DNA mismatch repair protein MutS [Enterococcus faecalis HIP11704]
Length = 637
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|425062323|ref|ZP_18465484.1| MutS domain V protein [Enterococcus faecium 503]
gi|403038762|gb|EJY49960.1| MutS domain V protein [Enterococcus faecium 503]
Length = 554
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 251/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +L P+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILQPTDLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQTPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEVIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G P ++ H I I+ +HP L
Sbjct: 280 KFSREINGSTPRINKSEH------IIIKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|312952243|ref|ZP_07771119.1| MutS domain V [Enterococcus faecalis TX0102]
gi|422690774|ref|ZP_16748819.1| MutS domain V [Enterococcus faecalis TX0031]
gi|422724912|ref|ZP_16781384.1| MutS domain V [Enterococcus faecalis TX0312]
gi|310629806|gb|EFQ13089.1| MutS domain V [Enterococcus faecalis TX0102]
gi|315154564|gb|EFT98580.1| MutS domain V [Enterococcus faecalis TX0031]
gi|315160074|gb|EFU04091.1| MutS domain V [Enterococcus faecalis TX0312]
Length = 673
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|307275063|ref|ZP_07556217.1| MutS domain V [Enterococcus faecalis TX2134]
gi|307290132|ref|ZP_07570051.1| MutS domain V [Enterococcus faecalis TX0411]
gi|422709481|ref|ZP_16766906.1| MutS domain V [Enterococcus faecalis TX0027]
gi|306498760|gb|EFM68258.1| MutS domain V [Enterococcus faecalis TX0411]
gi|306508181|gb|EFM77297.1| MutS domain V [Enterococcus faecalis TX2134]
gi|315036066|gb|EFT47998.1| MutS domain V [Enterococcus faecalis TX0027]
Length = 673
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|315652943|ref|ZP_07905909.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
gi|315484801|gb|EFU75217.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
Length = 785
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 276/562 (49%), Gaps = 69/562 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E Q+ + T+AAL ++ + L LS ++DI L G LS +E+ + L +N
Sbjct: 42 EIQRNQSHTTAALDRIRLKGNLSLSEVKDIKDSLKRLEIGSSLSQAELMKI---LSILNA 98
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K ++ D Y L E + + L++++ CI + I+ D AS +L
Sbjct: 99 SAKAISYGLHSDD---PEYDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSH 154
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR R + ++S + I A + +IT+R C+ IK+ +K + G+
Sbjct: 155 IR----RKINQINSKMYTELNNILNAHREYLMDSVITQRDGAYCLPIKSEYKNKVA-GVV 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SS+G+T F+EP + NN LS E E IL L+ A ++ +
Sbjct: 210 HDRSSTGSTVFIEPLAIIRMNNELKSLSMDEKKEIEKILESLSLFAADYINILENNSKNL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +D +A+A ++ M+G P +S+ + INI+ +HPLL +
Sbjct: 270 IFLDFVYAKANLSKKMNGSEPKFNSKHY------INIKEGRHPLLDTKKV---------- 313
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPI+I + +++ITGPNTGGKT S+KT+GL +
Sbjct: 314 -------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGLFT 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M ++GL++PA L FD + ADIGD QS+EQ+LSTFSGH+ IV IL SL
Sbjct: 349 IMGQSGLHIPAFEGSELSVFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAGSLC 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+ EF +
Sbjct: 409 LFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCEFDV 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ 544
TL PTYRIL G G SNA IA +G II A + L+ +L +RQ
Sbjct: 469 ATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEAGTHLEKDAKDFEDLLAKLENDRQI 528
Query: 545 HRKSELYQSLMEERRKLESQAR 566
K +L S+ + +R++ES R
Sbjct: 529 IEKDKL--SIQKYKREIESLKR 548
>gi|307267887|ref|ZP_07549277.1| MutS domain V [Enterococcus faecalis TX4248]
gi|306515762|gb|EFM84285.1| MutS domain V [Enterococcus faecalis TX4248]
Length = 673
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|422729793|ref|ZP_16786190.1| MutS domain V [Enterococcus faecalis TX0012]
gi|315149703|gb|EFT93719.1| MutS domain V [Enterococcus faecalis TX0012]
Length = 673
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F E EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADF-RETEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 WKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|430371770|ref|ZP_19429432.1| MutS2 family protein [Enterococcus faecalis M7]
gi|429514975|gb|ELA04507.1| MutS2 family protein [Enterococcus faecalis M7]
Length = 637
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|397691555|ref|YP_006528809.1| MutS2 family protein [Melioribacter roseus P3M]
gi|395813047|gb|AFN75796.1| MutS2 family protein [Melioribacter roseus P3M]
Length = 782
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 256/494 (51%), Gaps = 59/494 (11%)
Query: 49 GILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF 108
I S + G +LS EI + R + + L + D +PL EL
Sbjct: 75 AIYRSRIEGVVLSSKEIREIYRLAQMSRKMVGYLKPEDQTD-------TPLDELRNALTV 127
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAG 164
E+ I D + D AS L+ IR++ R++ + + ++ LLKK++ +
Sbjct: 128 DKVFEKNIEKIFDENW-DVKDDASPALKSIRSDIREKELSLQKTVNRLLKKLSEEYL--- 183
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + T+R R+ + +KA HK + G + SS+G T ++EP +E NN + L
Sbjct: 184 -VQEEYFTQRDGRIVLPVKAEHKRHVK-GFIHSESSTGQTVYIEPAEILELNNDILSLKF 241
Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
+E E IL ++T +IA +E+ + + +D FARA +A + G P
Sbjct: 242 AEKREIEKILLVITRQIAAKSQELLDAYNIITALDTLFARAKYALEIIGSIP-------- 293
Query: 285 SFDSSINIEGI--KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
+FD+ IE I +HP+LL + L ++ VP
Sbjct: 294 TFDNGKPIELIDARHPILL----KKLGFEAT---------------------------VP 322
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+++K+ + +++V+TGPN GGKT ++KT+GL LM+++G+ +P L F+ +L DI
Sbjct: 323 LNLKI-TDQKILVLTGPNAGGKTVALKTIGLLVLMAQSGIPIPCHPDSNLHIFEKVLVDI 381
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD+QS+E +LSTFS H++ I ILE + +LVL+DE+G+GTDP EG A+AT IL LRD
Sbjct: 382 GDYQSIEDDLSTFSSHLTNIKSILENANESTLVLLDEVGTGTDPVEGAAIATGILISLRD 441
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ L V TTH+ L + ++ +F+N + EF E L+PTYR G G S A IA IG
Sbjct: 442 KGALVVATTHHGSLKLIANQLDKFQNCSMEFDSEELKPTYRFNQGMPGSSYAFEIATRIG 501
Query: 523 FDRKIIQRAQKLVE 536
FD K I +++ ++
Sbjct: 502 FDEKFIDLSKRYID 515
>gi|289766107|ref|ZP_06525485.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
gi|289717662|gb|EFD81674.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
Length = 778
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 265/520 (50%), Gaps = 73/520 (14%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V KL D L +Y L E++ N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLREMIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILS------ 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D VP+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERR 559
+K++E ++ + Q+ E + L EE R
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR 545
>gi|422699729|ref|ZP_16757591.1| MutS domain V [Enterococcus faecalis TX1342]
gi|315171849|gb|EFU15866.1| MutS domain V [Enterococcus faecalis TX1342]
Length = 673
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|261206866|ref|ZP_05921557.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565679|ref|ZP_06446124.1| DNA mismatch repair protein MutS [Enterococcus faecium D344SRF]
gi|293568464|ref|ZP_06679784.1| MutS2 family protein [Enterococcus faecium E1071]
gi|294616422|ref|ZP_06696210.1| MutS2 family protein [Enterococcus faecium E1636]
gi|294618551|ref|ZP_06698112.1| MutS2 family protein [Enterococcus faecium E1679]
gi|314938091|ref|ZP_07845397.1| MutS domain V [Enterococcus faecium TX0133a04]
gi|314941511|ref|ZP_07848398.1| MutS domain V [Enterococcus faecium TX0133C]
gi|314953161|ref|ZP_07856111.1| MutS domain V [Enterococcus faecium TX0133A]
gi|314994329|ref|ZP_07859623.1| MutS domain V [Enterococcus faecium TX0133B]
gi|314997757|ref|ZP_07862670.1| MutS domain V [Enterococcus faecium TX0133a01]
gi|406579662|ref|ZP_11054891.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD4E]
gi|406581976|ref|ZP_11057110.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD3E]
gi|406584109|ref|ZP_11059146.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD2E]
gi|406590880|ref|ZP_11065224.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD1E]
gi|410937943|ref|ZP_11369801.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD5E]
gi|416136564|ref|ZP_11598674.1| MutS2 protein [Enterococcus faecium E4452]
gi|424792311|ref|ZP_18218552.1| MutS domain V protein [Enterococcus faecium V689]
gi|424913364|ref|ZP_18336731.1| MutS domain V protein [Enterococcus faecium R497]
gi|424955180|ref|ZP_18370030.1| MutS domain V protein [Enterococcus faecium R494]
gi|424965359|ref|ZP_18379343.1| MutS domain V protein [Enterococcus faecium P1190]
gi|424972733|ref|ZP_18386054.1| MutS domain V protein [Enterococcus faecium P1139]
gi|424975713|ref|ZP_18388852.1| MutS domain V protein [Enterococcus faecium P1137]
gi|424979238|ref|ZP_18392100.1| MutS domain V protein [Enterococcus faecium P1123]
gi|424982744|ref|ZP_18395369.1| MutS domain V protein [Enterococcus faecium ERV99]
gi|425021924|ref|ZP_18432144.1| MutS domain V protein [Enterococcus faecium C497]
gi|425030285|ref|ZP_18435472.1| MutS domain V protein [Enterococcus faecium C1904]
gi|425036066|ref|ZP_18440863.1| MutS domain V protein [Enterococcus faecium 514]
gi|425039585|ref|ZP_18444109.1| MutS domain V protein [Enterococcus faecium 513]
gi|425042739|ref|ZP_18447037.1| MutS domain V protein [Enterococcus faecium 511]
gi|425047745|ref|ZP_18451684.1| MutS domain V protein [Enterococcus faecium 509]
gi|425053817|ref|ZP_18457340.1| MutS domain V protein [Enterococcus faecium 506]
gi|427397205|ref|ZP_18889831.1| hypothetical protein HMPREF9307_02007 [Enterococcus durans
FB129-CNAB-4]
gi|430861629|ref|ZP_19479093.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1573]
gi|430955796|ref|ZP_19486596.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1576]
gi|431000912|ref|ZP_19488393.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1578]
gi|431232699|ref|ZP_19502756.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1622]
gi|431257721|ref|ZP_19505004.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1623]
gi|431303271|ref|ZP_19508118.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1626]
gi|431377824|ref|ZP_19510610.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1627]
gi|431670714|ref|ZP_19524246.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1904]
gi|431753672|ref|ZP_19542339.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2883]
gi|260078996|gb|EEW66696.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162537|gb|EFD10392.1| DNA mismatch repair protein MutS [Enterococcus faecium D344SRF]
gi|291588800|gb|EFF20628.1| MutS2 family protein [Enterococcus faecium E1071]
gi|291590711|gb|EFF22432.1| MutS2 family protein [Enterococcus faecium E1636]
gi|291595203|gb|EFF26535.1| MutS2 family protein [Enterococcus faecium E1679]
gi|313588201|gb|EFR67046.1| MutS domain V [Enterococcus faecium TX0133a01]
gi|313591248|gb|EFR70093.1| MutS domain V [Enterococcus faecium TX0133B]
gi|313594760|gb|EFR73605.1| MutS domain V [Enterococcus faecium TX0133A]
gi|313599663|gb|EFR78506.1| MutS domain V [Enterococcus faecium TX0133C]
gi|313642539|gb|EFS07119.1| MutS domain V [Enterococcus faecium TX0133a04]
gi|364091807|gb|EHM34238.1| MutS2 protein [Enterococcus faecium E4452]
gi|402917773|gb|EJX38520.1| MutS domain V protein [Enterococcus faecium V689]
gi|402927146|gb|EJX47128.1| MutS domain V protein [Enterococcus faecium R497]
gi|402934594|gb|EJX53923.1| MutS domain V protein [Enterococcus faecium R494]
gi|402943876|gb|EJX62333.1| MutS domain V protein [Enterococcus faecium P1190]
gi|402952800|gb|EJX70576.1| MutS domain V protein [Enterococcus faecium P1139]
gi|402952883|gb|EJX70650.1| MutS domain V protein [Enterococcus faecium P1137]
gi|402959022|gb|EJX76302.1| MutS domain V protein [Enterococcus faecium P1123]
gi|402959792|gb|EJX77016.1| MutS domain V protein [Enterococcus faecium ERV99]
gi|403003624|gb|EJY17509.1| MutS domain V protein [Enterococcus faecium C1904]
gi|403004911|gb|EJY18669.1| MutS domain V protein [Enterococcus faecium C497]
gi|403015416|gb|EJY28319.1| MutS domain V protein [Enterococcus faecium 513]
gi|403015991|gb|EJY28837.1| MutS domain V protein [Enterococcus faecium 514]
gi|403022306|gb|EJY34686.1| MutS domain V protein [Enterococcus faecium 511]
gi|403028875|gb|EJY40670.1| MutS domain V protein [Enterococcus faecium 506]
gi|403032785|gb|EJY44329.1| MutS domain V protein [Enterococcus faecium 509]
gi|404455144|gb|EKA02010.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD4E]
gi|404458850|gb|EKA05244.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD3E]
gi|404464696|gb|EKA10221.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD2E]
gi|404468708|gb|EKA13608.1| DNA mismatch repair protein MutS2 [Enterococcus sp. GMD1E]
gi|410733582|gb|EKQ75505.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD5E]
gi|425722531|gb|EKU85426.1| hypothetical protein HMPREF9307_02007 [Enterococcus durans
FB129-CNAB-4]
gi|430549668|gb|ELA89483.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1573]
gi|430556979|gb|ELA96461.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1576]
gi|430562571|gb|ELB01803.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1578]
gi|430573283|gb|ELB12105.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1622]
gi|430577456|gb|ELB16053.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1623]
gi|430579912|gb|ELB18392.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1626]
gi|430582774|gb|ELB21190.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1627]
gi|430599689|gb|ELB37381.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1904]
gi|430621005|gb|ELB57793.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E2883]
Length = 642
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 251/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +L P+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILQPTDLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQTPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEVIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G P ++ H I I+ +HP L
Sbjct: 280 KFSREINGSTPRINKSEH------IIIKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|431158999|ref|ZP_19499740.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1620]
gi|430574523|gb|ELB13288.1| DNA mismatch repair protein MutS2 [Enterococcus faecium E1620]
Length = 642
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 251/510 (49%), Gaps = 58/510 (11%)
Query: 29 AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAEL 88
A L + SQ + + I + G +L P+++ LR+ + K
Sbjct: 53 ARLILESSQHVPFMGLPRIDALTEQVKKGLILQPTDLIEYADFLRSSRMITKFF------ 106
Query: 89 DGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLL--IILDRASEDLELIRAERKRN 145
D Q +PLL K+ L +EE ID K+ + D AS +L +R + +
Sbjct: 107 --DKNQYQTPLLFAYSKHLPDLINVEE----LIDQKIKNNKVSDDASRNLRKVRKQLQLI 160
Query: 146 MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
+ + S L K I + +I ++ + IKAS+K + DG ++ S+ T
Sbjct: 161 EKEIQSKLLKFLRHPKNKEMIQEAMIVQKGEYYTIPIKASYKNKI-DGTIIDESNKRTTV 219
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP + N L EI+EE +L+ LT IA++E I L++ + +D+ FARA
Sbjct: 220 FIEPTVISKLNEHYQLLKAEEISEEYQVLAALTGAIAENEEVIDLLIETITVLDIIFARA 279
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
F++ ++G P ++ H I I+ +HP L
Sbjct: 280 KFSREINGSTPRINKSEH------IIIKQGRHPFL------------------------- 308
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
+ VP+D+++ + R ++ITG N GGKT +KT+GL +LM+ G+ +P
Sbjct: 309 -----------PEHAVPLDVEIGKDYRGLIITGANAGGKTVVLKTVGLLTLMAMFGMQVP 357
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
AK L FD I D+GDHQ+LE LSTFSGH+ I IL+ + R +LVL+DEIGSGT+
Sbjct: 358 AKEGTELAVFDEIFVDVGDHQNLENALSTFSGHMQNIAAILKKIKRNTLVLLDEIGSGTE 417
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG ALA +I++ + ++ L + TTHY ++ F AA F E LRP Y++
Sbjct: 418 PNEGAALAIAIMESMYEQGALIIATTHYGEIKKFAGDHEDFVPAAMAFDREALRPKYQLR 477
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
G TG+S AL IA + K+I +A++ +
Sbjct: 478 VGETGESQALWIAHKMDMSMKLIHQAERYL 507
>gi|430362840|ref|ZP_19427258.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1X]
gi|429511939|gb|ELA01560.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1X]
Length = 660
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|257088094|ref|ZP_05582455.1| DNA mismatch repair protein MutS [Enterococcus faecalis D6]
gi|256996124|gb|EEU83426.1| DNA mismatch repair protein MutS [Enterococcus faecalis D6]
Length = 637
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 40 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 100 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 150
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 151 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 210 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 270 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 310 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 347
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 348 VMAQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 407
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 408 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 467
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 468 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 509
>gi|386713232|ref|YP_006179555.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
gi|384072788|emb|CCG44278.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
Length = 638
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 258/499 (51%), Gaps = 66/499 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
+ + T+ED+ +L G + ++ A+ L + K+ + E+ +P
Sbjct: 63 IPIHTLEDVTDMLEQGKKGMFIRANQFSALLSFLDHCTKL-KRFMQDKEI-------IAP 114
Query: 99 LLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK-KV 156
++ L + + L+ LEE I I + + D AS++L IR + ++ S LK +
Sbjct: 115 IISLYASSISDLSRLEEDIHQVI--RHGQVDDYASKNLAKIR----KQIQTKQSRLKERT 168
Query: 157 AAQIFQAGGI-DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +P ++ R + IK ++ + GI ++ S+SGAT F+EP+ E
Sbjct: 169 EAQAKKYKTIMQEPRPVEKDGRWTLPIKRENRNKIKGGI-VDQSASGATLFVEPE---EL 224
Query: 216 NNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
N++ L + EE IL +TAE+ E E+ M+ + E D+ FA+ +++ ++
Sbjct: 225 ANLQEELQLLRMNEEHEVEQILYTMTAEVLDHESELNLAMETMHEYDVIFAKGKYSRMIN 284
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
G P S D ++ I +HP+L
Sbjct: 285 GTAPEFSE------DFTLRISMARHPML-------------------------------- 306
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
+ VP+ I++ E + ++ITGPNTGGKT ++KT+GL LM+++GL +PA+ L
Sbjct: 307 ----GEKAVPLSIQMNSEDQALLITGPNTGGKTVTLKTVGLLCLMAQSGLPIPAEKGSVL 362
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
P F I DIGD QS+E+NLSTFS + ++DIL + S++L+DEIGSGTDP EG+ L
Sbjct: 363 PVFQQIFVDIGDGQSIEENLSTFSSRLVNLIDILREANDHSMLLLDEIGSGTDPGEGMGL 422
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
AT+IL L ++ + TTHY+++ F N A EF LETL+PTYR+L G++G S
Sbjct: 423 ATAILDKLSEKGATILATTHYSEMKEYARHKPGFMNGAMEFDLETLKPTYRLLLGTSGRS 482
Query: 513 NALNIAKSIGFDRKIIQRA 531
A +IA +G +I+ +A
Sbjct: 483 QAFDIAHKLGLHPEILNQA 501
>gi|384514220|ref|YP_005709313.1| DNA mismatch repair protein MutS2 [Enterococcus faecalis OG1RF]
gi|422693791|ref|ZP_16751798.1| MutS domain V [Enterococcus faecalis TX4244]
gi|315148825|gb|EFT92841.1| MutS domain V [Enterococcus faecalis TX4244]
gi|327536109|gb|AEA94943.1| DNA mismatch repair protein MutS2 [Enterococcus faecalis OG1RF]
Length = 673
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 53/522 (10%)
Query: 17 LEESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE Q L +T+ A ++ S Q + + I +L G +L+P+E+ V LR+
Sbjct: 76 LETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSS 135
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +K E + L YS L +F +EE+I I + + AS L
Sbjct: 136 QRI-QKFFEKNQYQTPRLFSYSQHL-----ADFRA-IEEQIYTKIHNQK--VATDASRQL 186
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +++ + K I + ++ K+ V IKAS+K + G
Sbjct: 187 RKIRRQINECQQEIETKVTKFLRNKNNQLYIQENMMVKKGEHYTVPIKASYKNKV-SGTI 245
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+ G T F+EP + N L E AEE IL+ LT I + ER + +D +
Sbjct: 246 IEQSNKGQTVFIEPVAISKLNEQLTLLKAEETAEEYQILAELTGLINEQERLVDQAVDTM 305
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ FAR +++ + G+ P ++ + + ++G KHPLLL
Sbjct: 306 TTLDIIFARGKYSREIGGITPKVNKEERLRI-----VQG-KHPLLL-------------- 345
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+ VP+ + E R +VITG N GGKT +KT+GL +
Sbjct: 346 ----------------------EHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLT 383
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M++ GL +PA+ +P D I DIGD Q+LE LSTFSGH+ I ++L V R +LV
Sbjct: 384 VMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLV 443
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DEIGSGT+P+EG LA +I++ + + L V TTHY ++ + F AA F
Sbjct: 444 LLDEIGSGTEPNEGAGLAIAIMETMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDR 503
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
ETL P Y++ G GDS AL IA+ + + ++I++A ++R
Sbjct: 504 ETLTPKYQLKIGEVGDSQALWIARKMKMEPQLIEKAAHYIQR 545
>gi|227534485|ref|ZP_03964534.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187884|gb|EEI67951.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 786
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 292/597 (48%), Gaps = 76/597 (12%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRRLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTE-AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREDST 584
+ H + + L ++R+ E+ Q A S+H E+ Y++ +T
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTT 561
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,579,368,921
Number of Sequences: 23463169
Number of extensions: 333933381
Number of successful extensions: 1283104
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8788
Number of HSP's successfully gapped in prelim test: 1526
Number of HSP's that attempted gapping in prelim test: 1259188
Number of HSP's gapped (non-prelim): 14031
length of query: 623
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 474
effective length of database: 8,863,183,186
effective search space: 4201148830164
effective search space used: 4201148830164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)