BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006975
(623 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|112982629|dbj|BAF03493.1| Ku70 homolog [Populus nigra]
Length = 627
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/627 (81%), Positives = 570/627 (90%), Gaps = 4/627 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
MELDPDD+F+DD+++ D+EFYQ+ E++KE+VVYLVDASPKMFS+TCP+ED +ETHF IA
Sbjct: 1 MELDPDDIFKDDEDDPDSEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFQIA 60
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
+SCIAQSLKTQIINR YDEVAICFFNTR+KKNLQDLN FVFNVAERE LDRPTAR IK+
Sbjct: 61 ISCIAQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKD 120
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
FD IEESF K+IGSQYGIVSGSRENSLYNALW+AQ LLRKGS+KTADKRILLFTNEDDPF
Sbjct: 121 FDCIEESFTKDIGSQYGIVSGSRENSLYNALWIAQALLRKGSAKTADKRILLFTNEDDPF 180
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
GSIKG AK DMTRTT+QRAKDAQDLGISIELLPLS PDEEF VS FY+D+IGLEGD+LA
Sbjct: 181 GSIKGVAKADMTRTTLQRAKDAQDLGISIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQ 240
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
FMPSAGQKL+DMKDQLRKRMF+KRIV+RI+ IANGLSIELNTYALIRPT+PGAITWLDS
Sbjct: 241 FMPSAGQKLQDMKDQLRKRMFTKRIVRRITLSIANGLSIELNTYALIRPTLPGAITWLDS 300
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
VTN PLKTERSFICADTGALMQEPAKR+QPYK +NI SV+ELSEIKRVS GHL L GFK
Sbjct: 301 VTNRPLKTERSFICADTGALMQEPAKRYQPYKNDNIMLSVEELSEIKRVSMGHLHLLGFK 360
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PLS LKDYHNLRPSTF+FPSDKEV+GSTCIFIAL RSM+ L RFAVAFYG+ S P+LVAL
Sbjct: 361 PLSCLKDYHNLRPSTFIFPSDKEVIGSTCIFIALLRSMVNLKRFAVAFYGSSSRPQLVAL 420
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA-VPRASDDEVKKAAALMKR 479
VAQDEI+ AGGQVEPPGMHMIYLPYSDD+R VEE+HSDT+A PRA+D+++KKAAAL+KR
Sbjct: 421 VAQDEIISAGGQVEPPGMHMIYLPYSDDVRHVEEIHSDTNAGAPRATDEQIKKAAALIKR 480
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
IDLKDFSV QFANP LQRHYAVLQALAL+EDDMPEI DET+PDEEGMARPGVVKAVEEFK
Sbjct: 481 IDLKDFSVFQFANPGLQRHYAVLQALALDEDDMPEINDETLPDEEGMARPGVVKAVEEFK 540
Query: 540 LSVYGDNYDEEGDV---KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
LSVYG+NYDEE D+ K S+AS+KRK A ENAAKE ANY+W DLAD G+LK++TV ELK
Sbjct: 541 LSVYGENYDEESDMGNGKASDASKKRKTAVENAAKESANYNWPDLADNGQLKDLTVTELK 600
Query: 597 LYLMAHNLSTTGRKETLISRILTHMGK 623
YL AHNL TG+KE LISRILTH+GK
Sbjct: 601 YYLTAHNLPVTGKKEVLISRILTHLGK 627
>gi|224116992|ref|XP_002317447.1| predicted protein [Populus trichocarpa]
gi|222860512|gb|EEE98059.1| predicted protein [Populus trichocarpa]
Length = 628
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/628 (81%), Positives = 570/628 (90%), Gaps = 5/628 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
MELDPDD+F+DD+++ D+EFYQ+ E++KE+VVYLVDASPKMFS+TCP+ED +ETHFHIA
Sbjct: 1 MELDPDDIFKDDEDDPDSEFYQQRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFHIA 60
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
+SCIAQSLKTQIINR YDEVAICFFNTR+KKNLQDLN FVFNVAERE LDRPTAR IK+
Sbjct: 61 ISCIAQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKD 120
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
FD IEESF K+IGSQYGIVSGSRENSLYNALW+AQ LLRKGS+KTADKRILLFTNEDDPF
Sbjct: 121 FDCIEESFTKDIGSQYGIVSGSRENSLYNALWIAQALLRKGSAKTADKRILLFTNEDDPF 180
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
GSIKG AK DMTRTT+QRAKDAQDLGISIELLPLS PDEEF VS FY+D+IGLEGD+LA
Sbjct: 181 GSIKGVAKADMTRTTLQRAKDAQDLGISIELLPLSQPDEEFNVSLFYSDLIGLEGDELAQ 240
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
FMPSAGQKL+DMKDQLRKRMF+KRIV+RI+ IANGLSIELNTYALIRPT+PGAITWLDS
Sbjct: 241 FMPSAGQKLQDMKDQLRKRMFTKRIVRRITLSIANGLSIELNTYALIRPTLPGAITWLDS 300
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
V+N PLKTERSFICADTGALMQEPAKR+QPYK +NI SV+ELSEIKRVSTGHL L GFK
Sbjct: 301 VSNRPLKTERSFICADTGALMQEPAKRYQPYKNDNIMLSVEELSEIKRVSTGHLHLLGFK 360
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PLS LKDYHNLRPSTF+FPSDKEV+GSTCIFIAL RSM+ L RFAVAFYG+ S P+LVAL
Sbjct: 361 PLSCLKDYHNLRPSTFIFPSDKEVIGSTCIFIALLRSMVNLKRFAVAFYGSSSRPQLVAL 420
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDD-IRPVEELHSDTDA-VPRASDDEVKKAAALMK 478
VAQDEI+ AGGQVEPPGMHMIYLPYSDD + + ++HSDT+A PRA+D+++KKAAAL+K
Sbjct: 421 VAQDEIISAGGQVEPPGMHMIYLPYSDDGMVDLLQIHSDTNAGAPRATDEQIKKAAALIK 480
Query: 479 RIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEF 538
RIDLKDFSV QFANP LQRHYAVLQALAL+EDDMPEI DET+PDEEGMARPGVVKAVEEF
Sbjct: 481 RIDLKDFSVFQFANPGLQRHYAVLQALALDEDDMPEINDETLPDEEGMARPGVVKAVEEF 540
Query: 539 KLSVYGDNYDEEGDV---KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQEL 595
KLSVYG+NYDEE D+ K S+AS+KRK A ENAAKE ANY+W DLAD G+LK++TV EL
Sbjct: 541 KLSVYGENYDEESDMGSGKASDASKKRKTAAENAAKESANYNWPDLADNGQLKDLTVTEL 600
Query: 596 KLYLMAHNLSTTGRKETLISRILTHMGK 623
K YL AHNL TG+KE LISRILTH+GK
Sbjct: 601 KYYLTAHNLPVTGKKEVLISRILTHLGK 628
>gi|255561040|ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
gi|223539210|gb|EEF40803.1| ku P70 DNA helicase, putative [Ricinus communis]
Length = 626
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/627 (80%), Positives = 564/627 (89%), Gaps = 5/627 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
MELDPDDVFRDD+++ D++FYQ+ E++KE+VVYLVDASPKMF+TT PAEDQ DETHFHIA
Sbjct: 1 MELDPDDVFRDDEDDPDSDFYQQRESSKEFVVYLVDASPKMFTTTFPAEDQKDETHFHIA 60
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
VS IAQSLKTQIINR YDEVAICFFNTR+K+NLQDLN VFV+NVAERE LDRPTAR IK+
Sbjct: 61 VSSIAQSLKTQIINRSYDEVAICFFNTREKRNLQDLNGVFVYNVAEREYLDRPTARLIKD 120
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
FD IEESF KEIGSQYGIVSGSRENSLYNALWVAQ LLRKGS+KTADKRILL TNEDDPF
Sbjct: 121 FDCIEESFMKEIGSQYGIVSGSRENSLYNALWVAQALLRKGSAKTADKRILLLTNEDDPF 180
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
GS++GAAK DMTRTT+QRAKDAQDLGISIELLPLS PDEEF +S FYA +IGLEGD+LA
Sbjct: 181 GSMQGAAKTDMTRTTLQRAKDAQDLGISIELLPLSQPDEEFHISLFYAGLIGLEGDELAQ 240
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
F+PSAGQKLEDMKDQLRKRMF+KRIV++I+ IA GLSI+LNTYALIRPT PGAITWLDS
Sbjct: 241 FVPSAGQKLEDMKDQLRKRMFTKRIVRKITLFIA-GLSIDLNTYALIRPTTPGAITWLDS 299
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
VTN PLKTERSFICADTGAL+ EP K PYK ENIKFSV+EL+EIKR+STGHLRL GFK
Sbjct: 300 VTNRPLKTERSFICADTGALILEPTKLSHPYKNENIKFSVEELAEIKRISTGHLRLLGFK 359
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PLS L+DYHNLRPSTFVFPSDKEV+GST IFIALHRSMLRLNRFAVAFYG S+PRLVAL
Sbjct: 360 PLSCLRDYHNLRPSTFVFPSDKEVIGSTSIFIALHRSMLRLNRFAVAFYGGSSHPRLVAL 419
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD-AVPRASDDEVKKAAALMKR 479
VAQDEIV AGGQ+EPPGMHMIYLPYSDD+R +EE HS+++ +P A+ D+ KKAA L+KR
Sbjct: 420 VAQDEIVSAGGQIEPPGMHMIYLPYSDDVRHIEEFHSESNVGLPHANGDQTKKAAGLIKR 479
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
IDLKDFSVCQFANP+LQRHYAVLQALALEED+MPE KDET+PDEEG+ARPGVVKA+EEFK
Sbjct: 480 IDLKDFSVCQFANPALQRHYAVLQALALEEDEMPESKDETLPDEEGLARPGVVKAIEEFK 539
Query: 540 LSVYGDNYDEE---GDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
LSVYGD YDEE G+ K +E SRKRKAA ENA E ANYDWADLAD GKLK++TV ELK
Sbjct: 540 LSVYGDKYDEENLLGNGKANETSRKRKAAAENAKNESANYDWADLADNGKLKDLTVAELK 599
Query: 597 LYLMAHNLSTTGRKETLISRILTHMGK 623
LYL AHN+ G+KE LIS+ILTH+GK
Sbjct: 600 LYLTAHNIPVAGKKEALISKILTHLGK 626
>gi|225433705|ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
vinifera]
gi|296089629|emb|CBI39448.3| unnamed protein product [Vitis vinifera]
Length = 623
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/604 (80%), Positives = 530/604 (87%), Gaps = 4/604 (0%)
Query: 23 EHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAI 82
E +TKE+VVYLVDASPKMFSTT EDQ DET FH AVSCI+QSLKTQIIN DEVAI
Sbjct: 21 EKASTKEFVVYLVDASPKMFSTTFQGEDQKDETPFHAAVSCISQSLKTQIINNSNDEVAI 80
Query: 83 CFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGS 142
CFFNTR+KKNLQDLN VFVFNVAERE LDRPTAR IKEFD IEE F KEIGSQYGI+SGS
Sbjct: 81 CFFNTREKKNLQDLNGVFVFNVAEREYLDRPTARLIKEFDRIEELFMKEIGSQYGIMSGS 140
Query: 143 RENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDA 202
RENSLYNALW AQ LLRKGS+KTADKRILLFTNEDDPFGSI GA K DMTRTT+QRAKD
Sbjct: 141 RENSLYNALWAAQALLRKGSAKTADKRILLFTNEDDPFGSITGATKMDMTRTTLQRAKDT 200
Query: 203 QDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
QDLGISIELLPLS PDEEF VS FYAD+IGLEGDDLALFMPS G KL DMK+QLRKRMF
Sbjct: 201 QDLGISIELLPLSCPDEEFNVSAFYADLIGLEGDDLALFMPSVGDKLTDMKNQLRKRMFK 260
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ 322
KR+V+RI+F I GLSIELNTYALIRPTVPG ITWLDS+TN PLKTERSFICADTGAL+Q
Sbjct: 261 KRVVRRITFSIVKGLSIELNTYALIRPTVPGTITWLDSITNLPLKTERSFICADTGALVQ 320
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
P KRF PYK +N+KF+ +ELSE+KR+STGHLRL GFKPLS LKDYHNLRPSTFVFP+DK
Sbjct: 321 -PTKRFHPYKNKNVKFTTEELSEVKRISTGHLRLLGFKPLSCLKDYHNLRPSTFVFPTDK 379
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIY 442
EVVGSTCIFIALHRSMLRL RFAVAFYG ++P+LVALVAQDEI+ G QVEPPGMHMIY
Sbjct: 380 EVVGSTCIFIALHRSMLRLKRFAVAFYGGSAHPQLVALVAQDEIIAGGVQVEPPGMHMIY 439
Query: 443 LPYSDDIRPVEELHSD-TDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAV 501
LPYSDDIR +EELHSD T PRA+DD++KKA ALM+RIDLKDFSVCQFANP+LQRHYAV
Sbjct: 440 LPYSDDIRHIEELHSDITVPTPRATDDQIKKATALMRRIDLKDFSVCQFANPALQRHYAV 499
Query: 502 LQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDE--EGDVKVSEAS 559
LQALALEED+MPEIKDET+PDEEGMARPGVV A+EEFK SVYG+NY+E EG K S+AS
Sbjct: 500 LQALALEEDEMPEIKDETLPDEEGMARPGVVNALEEFKKSVYGENYNEEDEGHGKASDAS 559
Query: 560 RKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
+KRKA ENA KE A YDWADLAD G+LK++T ELK YL AHNL+ G+KE LISRILT
Sbjct: 560 KKRKAVAENAVKESAKYDWADLADNGRLKDLTTVELKYYLTAHNLAVGGKKEVLISRILT 619
Query: 620 HMGK 623
HMGK
Sbjct: 620 HMGK 623
>gi|449502267|ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2
subunit KU70-like [Cucumis sativus]
Length = 625
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/625 (75%), Positives = 547/625 (87%), Gaps = 2/625 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDPD+VFRDDD++ DN F+QE E+TKE VYLVDASPKMF+TTC +ED +ETHF +A
Sbjct: 1 MDLDPDEVFRDDDDDPDNPFFQERESTKELAVYLVDASPKMFTTTCLSEDXKEETHFQVA 60
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
+SCI+QSLKTQIINR YDEVAICFFNTR+KKNLQDLN VFV NV ERE LDRPTAR +K
Sbjct: 61 LSCISQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVFVLNVPEREDLDRPTARLLKT 120
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
D IEE F KEIGSQYGIVSGSREN+LYNALW AQ LLRKGS+KT DKRILLFTNEDDPF
Sbjct: 121 IDGIEEVFMKEIGSQYGIVSGSRENALYNALWAAQALLRKGSAKTLDKRILLFTNEDDPF 180
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
GSIKGA K D+ RTT+QRAKDAQDLGISIEL PLS P+E+F +S FYAD++GLEG DL
Sbjct: 181 GSIKGATKFDLIRTTLQRAKDAQDLGISIELFPLSCPNEQFNLSLFYADLVGLEGGDLVQ 240
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
++PSAG +L+DMKDQL+KRMF KR+V+R+ I N LSI++N+YALIRPT+PGAITWLDS
Sbjct: 241 YLPSAGDRLQDMKDQLKKRMFKKRVVRRLKLSITNKLSIDVNSYALIRPTLPGAITWLDS 300
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
++N PLKTERSFICADTGAL EP+KRFQ YK + IKFS +ELSEIKRVS GHL+L GFK
Sbjct: 301 ISNRPLKTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKRVSAGHLQLLGFK 360
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PLS LKDYHNLRPSTF++PSD+ + GSTCIFIALHRSM++LNRFAVAF+G+PS P+LVAL
Sbjct: 361 PLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRFAVAFFGSPSRPQLVAL 420
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
VAQDEI+ A GQVEPPGM+M+YLPY+DDIR VEELH + D PRA+DD+VKKAAALMKRI
Sbjct: 421 VAQDEIITAAGQVEPPGMNMLYLPYADDIRHVEELHPNPDIAPRATDDQVKKAAALMKRI 480
Query: 481 DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKL 540
DLKDFSVCQFANP+LQRHYAVLQALALEED+MPE+ DETVPDEEGMARPGVVK +EEFKL
Sbjct: 481 DLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKL 540
Query: 541 SVYGDNYDEE--GDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLY 598
SVYG+NY+EE G KVSE S+KRKA +E A+++C YDWADLAD GKLKE++V ELK Y
Sbjct: 541 SVYGENYEEEEAGKGKVSEVSKKRKAISETASQKCKEYDWADLADNGKLKELSVVELKYY 600
Query: 599 LMAHNLSTTGRKETLISRILTHMGK 623
L AH+L +G+KE LISRIL+HMGK
Sbjct: 601 LTAHDLPVSGKKEALISRILSHMGK 625
>gi|449468754|ref|XP_004152086.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Cucumis
sativus]
Length = 625
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/625 (75%), Positives = 548/625 (87%), Gaps = 2/625 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDPD+VFRDDD++ DN F+QE E+TKE VYLVDASPKMF+TTC +ED+ +ETHF +A
Sbjct: 1 MDLDPDEVFRDDDDDPDNPFFQERESTKELAVYLVDASPKMFTTTCLSEDKKEETHFQVA 60
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
+SCI+QSLKTQIINR YDEVAICFFNTR+KKNLQDLN VFV NV ERE LDRPTAR +K
Sbjct: 61 LSCISQSLKTQIINRSYDEVAICFFNTREKKNLQDLNGVFVLNVPEREDLDRPTARLLKT 120
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
D IEE F KEIGSQYGIVSGSREN+LYNALW AQ LLRKGS+KT DKRILLFTNEDDPF
Sbjct: 121 IDGIEEVFMKEIGSQYGIVSGSRENALYNALWAAQALLRKGSAKTLDKRILLFTNEDDPF 180
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
GSIKGA K D+ RTT+QRAKDAQDLGISIEL PLS P+E+F +S FYAD++GLEG DL
Sbjct: 181 GSIKGATKFDLIRTTLQRAKDAQDLGISIELFPLSCPNEQFNLSLFYADLVGLEGGDLVQ 240
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
++PSAG +L+DMKDQL+KRMF KR+V+R+ I N LSI++N+YALIRPT+PGAITWLDS
Sbjct: 241 YLPSAGDRLQDMKDQLKKRMFKKRVVRRLKLSITNKLSIDVNSYALIRPTLPGAITWLDS 300
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
++N PLKTERSFICADTGAL EP+KRFQ YK + IKFS +ELSEIKRVS GHL+L GFK
Sbjct: 301 ISNRPLKTERSFICADTGALFLEPSKRFQLYKNQVIKFSGEELSEIKRVSAGHLQLLGFK 360
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PLS LKDYHNLRPSTF++PSD+ + GSTCIFIALHRSM++LNRFAVAF+G+PS P+LVAL
Sbjct: 361 PLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHRSMVKLNRFAVAFFGSPSRPQLVAL 420
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
VAQDEI+ A GQVEPPGM+M+YLPY+DDIR VEELH + D PRA+DD+VKKAAALMKRI
Sbjct: 421 VAQDEIITAAGQVEPPGMNMLYLPYADDIRHVEELHPNPDIAPRATDDQVKKAAALMKRI 480
Query: 481 DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKL 540
DLKDFSVCQFANP+LQRHYAVLQALALEED+MPE+ DETVPDEEGMARPGVVK +EEFKL
Sbjct: 481 DLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKL 540
Query: 541 SVYGDNYDEE--GDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLY 598
SVYG+NY+EE G KVSE S+KRKA +E A+++C YDWADLAD GKLKE++V ELK Y
Sbjct: 541 SVYGENYEEEEAGKGKVSEVSKKRKAISETASQKCKEYDWADLADNGKLKELSVVELKYY 600
Query: 599 LMAHNLSTTGRKETLISRILTHMGK 623
L AH+L +G+KE LISRIL+HMGK
Sbjct: 601 LTAHDLPVSGKKEALISRILSHMGK 625
>gi|356576925|ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
max]
Length = 633
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/622 (75%), Positives = 546/622 (87%), Gaps = 6/622 (0%)
Query: 8 VFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAE--DQTDETHFHIAVSCIA 65
+FRDD+++ +FYQE+E++KEYVVYLVDASPKMFSTTCPAE DQ ETHFHIA+SCI+
Sbjct: 12 IFRDDEDDPQAQFYQENESSKEYVVYLVDASPKMFSTTCPAEEDDQNGETHFHIAISCIS 71
Query: 66 QSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE 125
Q+L++QIINR YD+VAICFFNTR+K NLQDLN+VFVFNV ERE LDRPTAR IKEF +E
Sbjct: 72 QTLESQIINRSYDQVAICFFNTREKNNLQDLNSVFVFNVPEREFLDRPTARLIKEFYQLE 131
Query: 126 ESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKG 185
ESF K IGSQ+GIVSG+RENSLYNA+W AQ LLRKGS+KT DKRILLFTN+DDPFGSIKG
Sbjct: 132 ESFSKIIGSQHGIVSGTRENSLYNAIWAAQALLRKGSAKTVDKRILLFTNDDDPFGSIKG 191
Query: 186 AAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSA 245
A K+DMTR T+QRAKDAQDLGISIELLPLS PDE F VS FYAD+IGLEGDDL FMPSA
Sbjct: 192 AVKSDMTRMTLQRAKDAQDLGISIELLPLSHPDEVFNVSQFYADLIGLEGDDLVDFMPSA 251
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHP 305
G+KLEDMKDQLRKRMF+KRIVKR+ F+I NG+SIELN+YALIRPTVPGAITWLDSVTNHP
Sbjct: 252 GKKLEDMKDQLRKRMFTKRIVKRLKFMIVNGISIELNSYALIRPTVPGAITWLDSVTNHP 311
Query: 306 LKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365
LK ER+FIC DTGAL++EP KRF PYK +NI FS+++LSEIKRVSTGHL L GFKPLS L
Sbjct: 312 LKIERTFICVDTGALVEEPTKRFLPYKNQNIIFSMKQLSEIKRVSTGHLHLLGFKPLSCL 371
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDE 425
+DY+NL+PSTF++PSD+ S C+FIALHRSM++LNRFAVAF G+ S P+LVAL+AQ+E
Sbjct: 372 RDYYNLKPSTFLYPSDEGTDSSMCMFIALHRSMIQLNRFAVAFSGSSSRPQLVALIAQEE 431
Query: 426 IVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA-VPRASDDEVKKAAALMKRIDLKD 484
++++GGQ+EPPGMHMIYLPYSDDIR VEE +SDT V ASDD++KKAA L+KRIDLKD
Sbjct: 432 VIQSGGQIEPPGMHMIYLPYSDDIRFVEERYSDTSGMVNIASDDQIKKAANLIKRIDLKD 491
Query: 485 FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYG 544
FSVCQ +NP+LQRHYAVLQALALEEDD+PE+KDE++PDEEG+ARPGVV+A+EEFK SVYG
Sbjct: 492 FSVCQISNPALQRHYAVLQALALEEDDIPEMKDESLPDEEGLARPGVVRALEEFKTSVYG 551
Query: 545 DNYDEE---GDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMA 601
DNYDEE G K +EAS+KRKA E A KEC NYDW DLAD GKLK++TV ELK YL A
Sbjct: 552 DNYDEENEPGTEKPTEASKKRKANAEFATKECENYDWGDLADTGKLKDLTVVELKYYLTA 611
Query: 602 HNLSTTGRKETLISRILTHMGK 623
HNL +G+KE +ISRILTHM K
Sbjct: 612 HNLPVSGKKEAIISRILTHMAK 633
>gi|18394425|ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arabidopsis thaliana]
gi|75309289|sp|Q9FQ08.1|KU70_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU70; AltName:
Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
Full=ATP-dependent DNA helicase II 70 kDa subunit
gi|12006424|gb|AAG44852.1|AF283759_1 Ku70-like protein [Arabidopsis thaliana]
gi|62320632|dbj|BAD95294.1| Ku70-like protein [Arabidopsis thaliana]
gi|332191406|gb|AEE29527.1| ATP-dependent DNA helicase 2 subunit KU70 [Arabidopsis thaliana]
Length = 621
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/625 (70%), Positives = 533/625 (85%), Gaps = 6/625 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQ-TDETHFHI 59
MELDPDDVFRD+DE+ +N+F+QE EA+KE+VVYL+DASPKMF +TCP+E++ E+HFHI
Sbjct: 1 MELDPDDVFRDEDEDPENDFFQEKEASKEFVVYLIDASPKMFCSTCPSEEEDKQESHFHI 60
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
AVSCIAQSLK IINR DE+AICFFNTR+KKNLQDLN V+VFNV ER+ +DRPTAR IK
Sbjct: 61 AVSCIAQSLKAHIINRSNDEIAICFFNTREKKNLQDLNGVYVFNVPERDSIDRPTARLIK 120
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
EFD IEESF+KEIGSQ GIVS SRENSLY+ALWVAQ LLRKGS KTADKR+ LFTNEDDP
Sbjct: 121 EFDLIEESFDKEIGSQTGIVSDSRENSLYSALWVAQALLRKGSLKTADKRMFLFTNEDDP 180
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
FGS++ + K DMTRTT+QRAKDAQDLGISIELLPLS PD++F ++ FY D+IGL D+L
Sbjct: 181 FGSMRISVKEDMTRTTLQRAKDAQDLGISIELLPLSQPDKQFNITLFYKDLIGLNSDELT 240
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
FMPS GQKLEDMKDQL+KR+ +KRI KRI+F+I +GLSIELN YAL+RP +PG+ITWLD
Sbjct: 241 EFMPSVGQKLEDMKDQLKKRVLAKRIAKRITFVICDGLSIELNGYALLRPAIPGSITWLD 300
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S TN P+K ERS+IC DTGA+MQ+P +R QPYK +NI F+V+ELS++KR+STGHLRL GF
Sbjct: 301 STTNLPVKVERSYICTDTGAIMQDPIQRIQPYKNQNIMFTVEELSQVKRISTGHLRLLGF 360
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVA 419
KPLS LKDYHNL+PSTF++PSDKEV+GST FIALHRSM++L RFAVAFYG + PRLVA
Sbjct: 361 KPLSCLKDYHNLKPSTFLYPSDKEVIGSTRAFIALHRSMIQLERFAVAFYGGTTPPRLVA 420
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD-AVPRASDDEVKKAAALMK 478
LVAQDEI GGQVEPPG++MIYLPY++DIR ++ELHS A PRASDD++KKA+ALM+
Sbjct: 421 LVAQDEIESDGGQVEPPGINMIYLPYANDIRDIDELHSKPGVAAPRASDDQLKKASALMR 480
Query: 479 RIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEF 538
R++LKDFSVCQFANP+LQRHYA+LQA+AL+E+++ E +DET+PDEEGM RP VVKA+E+F
Sbjct: 481 RLELKDFSVCQFANPALQRHYAILQAIALDENELRETRDETLPDEEGMNRPAVVKAIEQF 540
Query: 539 KLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLY 598
K S+YGD+ DEE D E S+KRKA + K YD+ +LA GKLK++TV ELK Y
Sbjct: 541 KQSIYGDDPDEESDSGAKEKSKKRKAGDADDGK----YDYIELAKTGKLKDLTVVELKTY 596
Query: 599 LMAHNLSTTGRKETLISRILTHMGK 623
L A+NL +G+KE LI+RILTH+GK
Sbjct: 597 LTANNLLVSGKKEVLINRILTHIGK 621
>gi|48995221|gb|AAT48365.1| Ku70-like protein [Vigna radiata]
Length = 629
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/629 (70%), Positives = 529/629 (84%), Gaps = 6/629 (0%)
Query: 1 MELDPDDVFRDDDEESD-NEFYQEHEATKEYVVYLVDASPKMFSTTCPA-EDQTDETHFH 58
MELD DD FRDD+++++ + E E +KEYVVYLVDASPKMF+T P E Q E+HFH
Sbjct: 1 MELDADDFFRDDEDQAEAQDSLLEGELSKEYVVYLVDASPKMFNTLFPTQEHQKLESHFH 60
Query: 59 IAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFI 118
IA+SCI+Q+LKTQII R YD+VAICFFNTR+KKNLQDL +VFVFNV ERE LDRPTAR I
Sbjct: 61 IAISCISQTLKTQIITRSYDQVAICFFNTREKKNLQDLKSVFVFNVPEREFLDRPTARLI 120
Query: 119 KEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDD 178
KEFD +EE F K IGSQ+GIVS +RENSLYNA+W AQ LLRKGS+KT DKRILLFTN+DD
Sbjct: 121 KEFDQLEELFSKNIGSQHGIVSDTRENSLYNAIWAAQALLRKGSAKTVDKRILLFTNDDD 180
Query: 179 PFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDL 238
PFGSIKGAAK+DM R T+QRAKDAQDLGISIE+LPLS PD FK+S FYAD+IGLEGDDL
Sbjct: 181 PFGSIKGAAKSDMIRMTLQRAKDAQDLGISIEILPLSCPDGVFKISQFYADLIGLEGDDL 240
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWL 298
FMP AG+KLEDMK QLRKRMF+KRIVKR+ F I NG+SIELN+YAL+R T PGA+TWL
Sbjct: 241 VDFMPEAGKKLEDMKSQLRKRMFTKRIVKRLKFTIVNGISIELNSYALVRHTEPGAVTWL 300
Query: 299 DSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
DSVTN PLK ER+FICADTGA+++ P K+F PYK +NI FS+++LSEIKR+STG L L G
Sbjct: 301 DSVTNLPLKIERTFICADTGAVVENPTKQFLPYKSQNIIFSMEQLSEIKRISTGQLNLLG 360
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLV 418
FKPLS L+DY+NL+PS+F++PS + S CIFIALHRSM+ LNRFAVAF G+ S P+LV
Sbjct: 361 FKPLSCLRDYYNLKPSSFLYPSHEGTDSSMCIFIALHRSMIELNRFAVAFSGSSSRPQLV 420
Query: 419 ALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA-VPRASDDEVKKAAALM 477
AL+AQ+E++++G Q+EPPGMHMIYLPYSDDIR VEE +SDT V +AS D++K+AA L+
Sbjct: 421 ALIAQEEVIQSGSQIEPPGMHMIYLPYSDDIRLVEERYSDTSGMVTKASSDQIKRAADLI 480
Query: 478 KRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEE 537
KR+DLKDFSVCQ +NP+LQRHYAVLQALALEEDD+PE+KDET+PDEEG+ RPGVV+AVEE
Sbjct: 481 KRVDLKDFSVCQISNPALQRHYAVLQALALEEDDVPEMKDETLPDEEGLTRPGVVRAVEE 540
Query: 538 FKLSVYGDNYDEE---GDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQE 594
FK S+YGDNYDE+ G K +EAS+KRKA E A EC YDW +LAD GKLK++TV E
Sbjct: 541 FKTSIYGDNYDEQNEHGIGKPTEASKKRKAMLEFATTECKQYDWGELADTGKLKDLTVVE 600
Query: 595 LKLYLMAHNLSTTGRKETLISRILTHMGK 623
LK YL AHNL +G+KE +ISRI +HMGK
Sbjct: 601 LKYYLTAHNLPVSGKKEAIISRIFSHMGK 629
>gi|297850100|ref|XP_002892931.1| hypothetical protein ARALYDRAFT_471898 [Arabidopsis lyrata subsp.
lyrata]
gi|297338773|gb|EFH69190.1| hypothetical protein ARALYDRAFT_471898 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/627 (69%), Positives = 532/627 (84%), Gaps = 8/627 (1%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQ-TDETHFHI 59
MELDPDDVFRD+DE+ ++EF+QE EA+KE++VYL+DASPKMFS+TCP+E++ E+HFHI
Sbjct: 1 MELDPDDVFRDEDEDPESEFFQEKEASKEFLVYLIDASPKMFSSTCPSEEEDKQESHFHI 60
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
AVSCIA SLK+ IINR DE+AICFFNTR+KKNLQDLN V+VFNV ER+ +DRPTAR IK
Sbjct: 61 AVSCIALSLKSHIINRSNDEIAICFFNTREKKNLQDLNGVYVFNVPERDCIDRPTARLIK 120
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
EFD IEESF+K+IGSQ GIVS SRENSLY+ALWVAQ LLRKGSSKTADKR+ LFTNEDDP
Sbjct: 121 EFDLIEESFDKDIGSQTGIVSDSRENSLYSALWVAQALLRKGSSKTADKRMFLFTNEDDP 180
Query: 180 FGSIKGAAKNDMTRTTMQRAKD-AQDLGISIELLPLSPPDEEFKVSHFY-ADMIGLEGDD 237
FG+++ + K DMTRTT+QRAKD QDLGISIELLPLS PD++F ++ FY ++IGL D+
Sbjct: 181 FGNMRISVKEDMTRTTLQRAKDDLQDLGISIELLPLSQPDKQFNITLFYKVNLIGLNSDE 240
Query: 238 LALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITW 297
L FMPS GQKLEDMKDQL+KR+ +KRI KRI+F+I +GLSIELN YAL+RP +PG+ITW
Sbjct: 241 LTEFMPSVGQKLEDMKDQLKKRVLAKRIAKRITFVICDGLSIELNGYALLRPAIPGSITW 300
Query: 298 LDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLH 357
LDS TN P+K ERS+IC DTGA+MQ+P +R QPYK +NI F+V+ELS++K++STGHLRL
Sbjct: 301 LDSTTNLPVKVERSYICTDTGAIMQDPIQRIQPYKNQNIMFTVEELSQVKKISTGHLRLL 360
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRL 417
GFKPLS LKDY+NL+PSTF++PSDKEV+GST FIALHRSM++L RFAVAFYG + PRL
Sbjct: 361 GFKPLSCLKDYYNLKPSTFLYPSDKEVIGSTRAFIALHRSMIQLERFAVAFYGGTTPPRL 420
Query: 418 VALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD-AVPRASDDEVKKAAAL 476
VALVAQDEI GGQVEPPGM+MIYLPY++DIR ++ELHS A PRAS+D++KKA+AL
Sbjct: 421 VALVAQDEIESDGGQVEPPGMNMIYLPYANDIRDIDELHSKPGVAAPRASEDQLKKASAL 480
Query: 477 MKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVE 536
M+R++LKDFSVCQFANP+LQRHYA+LQA+AL+E+++ E +DET+PDEEGM RP VVKA+E
Sbjct: 481 MRRLELKDFSVCQFANPALQRHYAILQAIALDENEVSETRDETLPDEEGMNRPAVVKAIE 540
Query: 537 EFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
FK S+YGD+ DEE D E SRKRKA + K YD+ +LA GKLK++TV ELK
Sbjct: 541 NFKQSIYGDDPDEESDSGAKEKSRKRKAGNADDGK----YDYIELAKTGKLKDLTVVELK 596
Query: 597 LYLMAHNLSTTGRKETLISRILTHMGK 623
YL A+NL G+KE LI+RILTH+GK
Sbjct: 597 TYLTANNLPLGGKKEVLINRILTHIGK 623
>gi|242043150|ref|XP_002459446.1| hypothetical protein SORBIDRAFT_02g004740 [Sorghum bicolor]
gi|241922823|gb|EER95967.1| hypothetical protein SORBIDRAFT_02g004740 [Sorghum bicolor]
Length = 628
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/630 (66%), Positives = 507/630 (80%), Gaps = 9/630 (1%)
Query: 1 MELDPDDVFRDD-DEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI 59
M+LDP+ +FRDD DE+ DN QE EA KE VVYLVDASPKMF+ +++ ETHF
Sbjct: 1 MDLDPEGIFRDDSDEDEDN--VQEREANKEMVVYLVDASPKMFTPATTQDNEKQETHFRT 58
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
VSCI +SLKTQII R YDEVAICFFNT++KKNLQD V+V+NV +RE+LDRPTA+ IK
Sbjct: 59 IVSCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYNVGDREELDRPTAKLIK 118
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
+F IE+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRIL+FTNEDDP
Sbjct: 119 DFSSIEDSFMSTIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRILIFTNEDDP 178
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
FG+I GA K DM RTT+QRAKDAQDLG+SIELLPLS PDE+F +S FYAD+IGL+GD++
Sbjct: 179 FGTITGAVKTDMIRTTVQRAKDAQDLGLSIELLPLSRPDEQFDMSLFYADLIGLDGDEIT 238
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
++PSAG +LEDM +QLRKR+ KR VK +SF I N + IE+NTYAL+RPT PG ITWLD
Sbjct: 239 EYLPSAGVRLEDMSNQLRKRIMKKRRVKTLSFAITNDVCIEVNTYALVRPTTPGTITWLD 298
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S++N PLK ERSFIC DTGAL+Q+ RFQ Y +KFSV+ELSE+KRV++ HLRL GF
Sbjct: 299 SLSNLPLKAERSFICNDTGALLQDAQTRFQMYNDTTVKFSVRELSEVKRVASHHLRLLGF 358
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVA 419
KPL LKDYHNLRPSTFV+PSD+ + GST +F+ALH SMLRL RFA+AFYGNP+ P+LVA
Sbjct: 359 KPLDCLKDYHNLRPSTFVYPSDQRIFGSTRVFVALHSSMLRLGRFALAFYGNPTRPQLVA 418
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
LVAQ+E+ +GGQ EPPGMHMIYLPYSDDIR EE+H D PRA+D+++KKA+ L KR
Sbjct: 419 LVAQEEVTSSGGQFEPPGMHMIYLPYSDDIRYPEEVHVTFDDAPRATDEQIKKASNLFKR 478
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
IDLK+FS CQ ANP+LQRHY +L+ALAL ED+MP+IKDET+P EEG++RPGVVKA+EEFK
Sbjct: 479 IDLKNFSTCQLANPALQRHYGILEALALGEDEMPDIKDETLPHEEGLSRPGVVKAIEEFK 538
Query: 540 LSVYGDNYDE------EGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQ 593
SVYG+NYD+ G +AS+KRK T+ AA+ A YDWA+LAD GKLKEMT
Sbjct: 539 TSVYGENYDQEEAEAAAGKASRGDASKKRKEITDAAAQMSAVYDWAELADNGKLKEMTAA 598
Query: 594 ELKLYLMAHNLSTTGRKETLISRILTHMGK 623
ELK YL AH+L +G+K+ L+SRILTH+GK
Sbjct: 599 ELKCYLTAHDLPVSGKKDVLVSRILTHLGK 628
>gi|242047112|ref|XP_002461302.1| hypothetical protein SORBIDRAFT_02g000480 [Sorghum bicolor]
gi|241924679|gb|EER97823.1| hypothetical protein SORBIDRAFT_02g000480 [Sorghum bicolor]
Length = 628
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/629 (65%), Positives = 506/629 (80%), Gaps = 9/629 (1%)
Query: 1 MELDPDDVFRDD-DEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI 59
M+LDP+ +FRDD DE+ DN QE EA K+ VVYLVDASPKMF+ +++ ET+FH
Sbjct: 1 MDLDPEGIFRDDSDEDEDN--VQEREANKDMVVYLVDASPKMFTPATTQDNEKQETYFHT 58
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
V+CI +SLKTQII R YDEVAICFFNT++KKNLQD V+V+NV +REQLDRPTA+ IK
Sbjct: 59 IVNCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYNVGDREQLDRPTAKLIK 118
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
+F IE+SF IGS++GI +GSREN+LYNALWVAQ LLRKGS KT KRIL+FTNEDDP
Sbjct: 119 DFSCIEDSFMSTIGSRFGITAGSRENTLYNALWVAQALLRKGSVKTVSKRILIFTNEDDP 178
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
FG++ GA K DM RTT+QRAKDAQDLG+SIELLPLS PDE+F +S FYAD+IGL+GD++
Sbjct: 179 FGTVTGAVKTDMIRTTIQRAKDAQDLGLSIELLPLSQPDEQFDMSLFYADLIGLDGDEIT 238
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
++PSAG KLEDM +QLRKR+ KR VK +SF I N + IE+NTYAL+RPT PG ITWLD
Sbjct: 239 EYLPSAGDKLEDMANQLRKRIMRKRRVKTLSFAITNDVCIEVNTYALVRPTTPGKITWLD 298
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S++N PLK ERSFIC DTGAL+Q+P RFQ Y +KFSV ELSE+KRV++ HLRL GF
Sbjct: 299 SLSNLPLKAERSFICNDTGALLQDPQTRFQMYNDTIVKFSVLELSEVKRVASHHLRLLGF 358
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVA 419
KPL LKDYHNLRPS F++PSD+ + GST +F+ALH SMLRL RFA+AFYGNP+ P+LVA
Sbjct: 359 KPLDCLKDYHNLRPSAFIYPSDERIFGSTRVFVALHSSMLRLGRFALAFYGNPTRPQLVA 418
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
LVAQ+E+ +GGQ+EPPGMHMIYLPYSDDIR EE H +D PRA+++++KKA L+KR
Sbjct: 419 LVAQEEVTSSGGQLEPPGMHMIYLPYSDDIRYPEEFHVTSDDAPRATNEQIKKALNLLKR 478
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
IDLK FS CQFANP+LQRHY +L+ALAL ED+MP+IKD+T+PDEEG++RPGVV A+EEFK
Sbjct: 479 IDLKKFSACQFANPALQRHYGILEALALGEDEMPDIKDDTLPDEEGLSRPGVVNAIEEFK 538
Query: 540 LSVYGDNYDE------EGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQ 593
SVYG+NYD+ G +AS+KRK T+ A + A YDWA+LAD GKLKEMTV
Sbjct: 539 TSVYGENYDQEEAEAAAGKASRGDASKKRKQITDAAVQMSAAYDWAELADNGKLKEMTVV 598
Query: 594 ELKLYLMAHNLSTTGRKETLISRILTHMG 622
ELK YL AH L +G+KE L+SRILTH+G
Sbjct: 599 ELKSYLTAHGLPVSGKKEVLVSRILTHLG 627
>gi|357111328|ref|XP_003557466.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like
[Brachypodium distachyon]
Length = 626
Score = 850 bits (2197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/627 (67%), Positives = 514/627 (81%), Gaps = 5/627 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAE-DQTDETHFHI 59
M+LDP+ +FRDD +E D+ + E EA KE VVYL+DASPKMF+ A+ D+ ETHFH
Sbjct: 1 MDLDPEGIFRDDSDEDDDNLH-EREANKEMVVYLIDASPKMFTPATTAQSDEKQETHFHT 59
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
V+CI QSLKTQII R +DEV+ICFFNT++KKNLQDL V+V+NV ERE LDRP AR IK
Sbjct: 60 IVNCITQSLKTQIIGRSHDEVSICFFNTKEKKNLQDLAGVYVYNVTEREPLDRPDARLIK 119
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
EF IE+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRIL+FTNEDDP
Sbjct: 120 EFSCIEDSFMNNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVVKRILIFTNEDDP 179
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
FG I GAAK DM RTT+QRAKDAQDLG+SIELLPLS PDE+F +S FYAD+IGLEGDD+
Sbjct: 180 FGGITGAAKTDMIRTTIQRAKDAQDLGLSIELLPLSRPDEDFNMSLFYADLIGLEGDDIV 239
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
++PSAG KLEDM +QLRKRM KR VK ++F I N + IE+NTYALIRPTVPGAITWLD
Sbjct: 240 QYVPSAGDKLEDMTNQLRKRMMKKRKVKTLAFAITNDVCIEVNTYALIRPTVPGAITWLD 299
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S++N PLK ERSFIC DTGAL+Q P KRFQ Y + +KFSV+ELS++KRV++ HLRL GF
Sbjct: 300 SISNLPLKAERSFICNDTGALLQNPQKRFQLYNDKVVKFSVRELSDVKRVASHHLRLLGF 359
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVA 419
KPL LKDYHNLRPSTF++PSD++V GST +F+ALH SMLRL RFA+AFYG P+ P+LVA
Sbjct: 360 KPLDCLKDYHNLRPSTFIYPSDEQVFGSTRVFVALHSSMLRLGRFALAFYGTPTRPQLVA 419
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
LVAQ+E++ +GGQ EPPGMHMIYLPYSDD+R EE+H + PR +D+++KKA+ L++R
Sbjct: 420 LVAQEEVISSGGQNEPPGMHMIYLPYSDDVRYPEEVHLTSGDAPRGTDEQIKKASNLLRR 479
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
+LK+FSV FANP+LQ+HY +L+ALAL ED+MP+IKDET+PDEEGMARPG+VKA+EEFK
Sbjct: 480 TELKNFSVHDFANPALQKHYGILEALALGEDEMPDIKDETLPDEEGMARPGIVKAIEEFK 539
Query: 540 LSVYGDNYDE---EGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
SV+G+NYD+ E + AS+KRKA T+ A+++ A YDWADLAD GKLKEMTV +LK
Sbjct: 540 ASVFGENYDQEEAEAAASKAGASKKRKAITDAASQKSAAYDWADLADTGKLKEMTVMDLK 599
Query: 597 LYLMAHNLSTTGRKETLISRILTHMGK 623
YL AH L +G+KE +ISRILTH+GK
Sbjct: 600 SYLTAHGLPVSGKKEAIISRILTHLGK 626
>gi|148907331|gb|ABR16802.1| unknown [Picea sitchensis]
Length = 630
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/630 (63%), Positives = 507/630 (80%), Gaps = 7/630 (1%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+ D +D+F+DDDE+ DN + Q+ EA K++V+Y++DA P MF ++ ETHF
Sbjct: 1 MDRDSNDLFQDDDEDQDNTYTQDREANKDFVIYMIDAGPDMFFEIKQEDEGKTETHFSTV 60
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V CI +SLK +IINR YDEVAICF+NTR+KKN+Q+ V+VFNV ERE+LD PTAR IK+
Sbjct: 61 VKCIVESLKIRIINRDYDEVAICFYNTREKKNMQESEGVYVFNVPEREELDHPTARLIKD 120
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
IE+ F++EIGSQ I+ GSREN LYNALWVAQGLLRKGS+ + DKRI LFTN DDPF
Sbjct: 121 LSCIEDKFKREIGSQSAIIPGSRENPLYNALWVAQGLLRKGSTHSTDKRIQLFTNNDDPF 180
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
G++ G AK DM RTT+QRAKDAQDLGISIEL PL+ P EEF VS FYAD+ LE ++++
Sbjct: 181 GNVDGGAKADMRRTTIQRAKDAQDLGISIELFPLNRPGEEFNVSIFYADIFELEKEEVSQ 240
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
FMP A +K ED+KDQL+KR++ KR VK+IS ++A+G+SI L+TYALIRP +PG++TWLDS
Sbjct: 241 FMPMAVEKFEDLKDQLKKRIYKKRTVKKISLLVADGMSIGLHTYALIRPAIPGSVTWLDS 300
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
VTN PLK+E S+ICADTGAL+ EP RFQ YK E +KF+V ELSEIK+V++ LRL GFK
Sbjct: 301 VTNIPLKSESSYICADTGALLTEPLPRFQMYKNEKVKFTVDELSEIKKVTSVPLRLLGFK 360
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PL LKDYHNLRP+TF++PSD+E+ GSTC+FIAL+R+MLR ++AVAFYGN S P+LVAL
Sbjct: 361 PLHCLKDYHNLRPATFLYPSDEEICGSTCVFIALYRAMLRFQKYAVAFYGNSSLPQLVAL 420
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA-VPRASDDEVKKAAALMKR 479
VA++EI + GQ+EPPGMHMIYLPYSDDIR VE+LH T+ PRAS++++ KA A+M++
Sbjct: 421 VAREEITSSSGQIEPPGMHMIYLPYSDDIRHVEKLHMTTNGPAPRASEEQIDKAVAMMRK 480
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
++LKDFSV QF+NP+LQRHYA+LQALALEED++PE KDET+PDEEGM RPG+ KAV+ FK
Sbjct: 481 LELKDFSVYQFSNPALQRHYAILQALALEEDELPETKDETMPDEEGMQRPGITKAVQAFK 540
Query: 540 LSVYGDNYD------EEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQ 593
VYG+N+D E K SEAS+KRKA+ E AAKE A+Y+W++LAD GKLK++TV
Sbjct: 541 NVVYGENHDFEEAEAEATKAKGSEASQKRKASAEVAAKEAASYNWSELADMGKLKDLTVV 600
Query: 594 ELKLYLMAHNLSTTGRKETLISRILTHMGK 623
ELK YL AHNL TG+KE LI+RI TH+GK
Sbjct: 601 ELKYYLTAHNLPVTGKKEVLINRIFTHLGK 630
>gi|115470925|ref|NP_001059061.1| Os07g0184900 [Oryza sativa Japonica Group]
gi|75139246|sp|Q7F1M0.1|KU70_ORYSJ RecName: Full=ATP-dependent DNA helicase 2 subunit KU70;
Short=OsKU70; AltName: Full=ATP-dependent DNA helicase 2
subunit 1; AltName: Full=ATP-dependent DNA helicase II
70 kDa subunit
gi|34393279|dbj|BAC83189.1| putative ATP-dependent DNA helicase II 70 kDa subunit [Oryza sativa
Japonica Group]
gi|113610597|dbj|BAF20975.1| Os07g0184900 [Oryza sativa Japonica Group]
gi|215717008|dbj|BAG95371.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/626 (65%), Positives = 511/626 (81%), Gaps = 5/626 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDP+ +FRDD +E D+ QE EA KE VVYL+DASPKMF+ A D+ +ETHFH
Sbjct: 1 MDLDPEGLFRDDSDEDDDNV-QEREANKEMVVYLIDASPKMFTPATKA-DEKEETHFHTI 58
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V+CI +LKTQII R YDEVAICFFNT++KKNLQ+L V+V+NV ERE LDRP AR IKE
Sbjct: 59 VNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYNVTEREPLDRPDARLIKE 118
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F IE+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRI++FTNEDDPF
Sbjct: 119 FSCIEDSFMSNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRIVIFTNEDDPF 178
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
G + GA K DM RTT+QRA+DAQDLG+SIELLPLS PDEEF +S FYAD+IGLEGD++
Sbjct: 179 GGLTGAVKTDMIRTTIQRARDAQDLGLSIELLPLSRPDEEFNMSLFYADLIGLEGDEIVD 238
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
++PS+G+KLEDM +QL+KRM KR VK ++F I N + IE+NTYALIR T PGAITWLDS
Sbjct: 239 YLPSSGEKLEDMTNQLKKRMMKKRKVKTLAFAITNDVCIEVNTYALIRSTTPGAITWLDS 298
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
++N PLK ERSFIC DTGAL+Q+P KRFQ Y + +KFS +ELS++KRVS+ HLRL GFK
Sbjct: 299 ISNLPLKAERSFICNDTGALIQDPQKRFQVYNDKIVKFSTRELSDVKRVSSHHLRLLGFK 358
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PL YLKDYHNLRPSTF++PSD+++ GST +F+ALH SM RL RFA+AFYGNP+ P+LVAL
Sbjct: 359 PLDYLKDYHNLRPSTFIYPSDEQIFGSTRVFVALHSSMRRLGRFALAFYGNPTRPQLVAL 418
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
+AQ+E+ AGGQ+EPPG+HMIYLPYSDD+R EE+H +D PRA+D+++KKA+ L++RI
Sbjct: 419 IAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDDAPRATDEQIKKASNLLRRI 478
Query: 481 DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKL 540
DLK+FSVCQF+NP+LQRHY +L+ALAL ED+MP++KDET+PDEEG+ARP VVKAVEEFK
Sbjct: 479 DLKNFSVCQFSNPALQRHYGILEALALGEDEMPDVKDETLPDEEGLARPVVVKAVEEFKA 538
Query: 541 SVYGDNYDEEGDVKVSEASRKRKAA---TENAAKECANYDWADLADKGKLKEMTVQELKL 597
SVYG+NYD+E + + K T+ AA++ A ++WA+LAD GKLK+MTV +LK
Sbjct: 539 SVYGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNWAELADTGKLKDMTVVDLKS 598
Query: 598 YLMAHNLSTTGRKETLISRILTHMGK 623
YL AH L +G+KE L+SRILTH+GK
Sbjct: 599 YLSAHGLPVSGKKEALVSRILTHLGK 624
>gi|347357751|gb|AEO86623.1| Ku70 [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/627 (66%), Positives = 510/627 (81%), Gaps = 8/627 (1%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAE-DQTDETHFHI 59
M+LDP+ +FRDD +E D+ + E EA KE VVYL+DASPKMF+ A+ D+ ETHFH
Sbjct: 1 MDLDPEGIFRDDSDEDDDNLH-EREANKEMVVYLIDASPKMFTPANAAKADEKQETHFHT 59
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
V+CI QSLKTQII R DEVAICFFNT++KKNLQ+L V+V+NV EREQLDRP AR IK
Sbjct: 60 IVNCITQSLKTQIIGRSRDEVAICFFNTKEKKNLQELAGVYVYNVTEREQLDRPDARLIK 119
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
EF +E+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRIL+FTNEDDP
Sbjct: 120 EFSCVEDSFMNNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRILIFTNEDDP 179
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
FG I GAAK DM RTT+QRAKDA+DLG+SIELLPLS PDE+F +S FYA++IGLEGD++
Sbjct: 180 FGGITGAAKADMIRTTIQRAKDAKDLGLSIELLPLSRPDEDFNMSLFYAELIGLEGDEVL 239
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
++PSAG+KLEDM DQLRKRM KR VK +SF I N + IE+NTYALIRPT PG ITWLD
Sbjct: 240 QYVPSAGEKLEDMTDQLRKRMMKKRKVKTLSFAITNDVCIEVNTYALIRPTAPGTITWLD 299
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S++N PLKTERSFIC DTGAL+Q P +RFQ Y + +KFSV+ELS++KRVS+ HL GF
Sbjct: 300 SISNLPLKTERSFICNDTGALLQAPQERFQLYNDKAVKFSVRELSDVKRVSSLHL---GF 356
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVA 419
KPL LKDYHNL PSTF++PSD+++ GST +F+ALH SMLRL RFA+AFYG P+ PRLVA
Sbjct: 357 KPLDCLKDYHNLSPSTFIYPSDEQIFGSTRVFVALHSSMLRLGRFALAFYGTPTRPRLVA 416
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
LVAQ+E++ + GQ EPPGMHMIYLPYSDD+R EE+H + PRA+D+++KKA+ L+KR
Sbjct: 417 LVAQEEVISSSGQDEPPGMHMIYLPYSDDVRYPEEVHLTSGDAPRATDEQIKKASNLLKR 476
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
IDLK FSVC+FANP LQ+HY +L+ALAL ED+MP+IKDET+PDEEGMARPGVVKA+EEFK
Sbjct: 477 IDLKHFSVCRFANPGLQKHYGILEALALGEDEMPDIKDETLPDEEGMARPGVVKAIEEFK 536
Query: 540 LSVYGDNYDE---EGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
+V+G+NYD+ E AS+KRKA + A+++ A YDWADLAD GKLK+MTV +LK
Sbjct: 537 AAVFGENYDQEEAEAAAAKGGASKKRKAIADAASQKSAAYDWADLADNGKLKDMTVMDLK 596
Query: 597 LYLMAHNLSTTGRKETLISRILTHMGK 623
YL AH L +G+K+ +ISRILTH+GK
Sbjct: 597 TYLTAHGLPVSGKKDAIISRILTHLGK 623
>gi|308052432|gb|ADO00728.1| Ku70 [Triticum aestivum]
Length = 626
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/627 (66%), Positives = 506/627 (80%), Gaps = 5/627 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAE-DQTDETHFHI 59
M+LDP+ +FRDD +E D+ + E EA KE VVYL+DASPKMF+ A+ D+ ETHFH
Sbjct: 1 MDLDPEGIFRDDSDEDDDNLH-EREANKEMVVYLIDASPKMFTPANAAKPDEMQETHFHT 59
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
V+CI QSLKTQII R DEVAICFFNT++KKNLQ+L V+V+N EREQLDRP AR IK
Sbjct: 60 IVNCITQSLKTQIIGRSRDEVAICFFNTKEKKNLQELAGVYVYNATEREQLDRPDARLIK 119
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
EF +E+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRIL+FTNEDDP
Sbjct: 120 EFSCVEDSFMNTIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRILIFTNEDDP 179
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
FG I GAAK DM RTT+QRAKDAQDLG+SIELLPLS PDE+F +S FYAD+IGLEGD++
Sbjct: 180 FGGITGAAKTDMIRTTIQRAKDAQDLGLSIELLPLSRPDEDFNMSLFYADLIGLEGDEVL 239
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
++PSAG+KLEDM DQLRKRM KR VK +SF I N + IE+NTYALIRPT PG ITWLD
Sbjct: 240 QYVPSAGEKLEDMTDQLRKRMMKKRKVKTLSFAITNDVCIEVNTYALIRPTAPGTITWLD 299
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S++N PLKTERSFIC DTGAL+Q P +RFQ Y + +KFSV+ELS++KRVS+ HLRL GF
Sbjct: 300 SISNLPLKTERSFICNDTGALLQAPQERFQLYNDKVVKFSVRELSDVKRVSSHHLRLLGF 359
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVA 419
KPL LKDYHNL PSTF++PSD+++ GST +F+ALH SM RL RFA+AFYG P+ PRLVA
Sbjct: 360 KPLDCLKDYHNLSPSTFIYPSDEQIFGSTRVFVALHSSMPRLGRFALAFYGTPTRPRLVA 419
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
LVAQ+E++ + GQ EPPG HMIYLPYSDD+R EE+H + PRA+D+++KKA+ L++R
Sbjct: 420 LVAQEEVISSSGQDEPPGTHMIYLPYSDDVRYPEEVHLTSGDAPRATDEQMKKASNLLRR 479
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
IDLK FSV FANP LQ+HY +L+ALAL ED+MP++KDET+PDEEG+ARPGVVKA+EEFK
Sbjct: 480 IDLKHFSVSHFANPGLQKHYGILEALALGEDEMPDMKDETLPDEEGLARPGVVKAIEEFK 539
Query: 540 LSVYGDNYDE---EGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
+V+G+NYD+ E AS+KRKA + A+++ A YDWADLAD GKLK+MTV LK
Sbjct: 540 AAVFGENYDQEEAEAAAAKGGASKKRKAIADAASQKSAAYDWADLADNGKLKDMTVMGLK 599
Query: 597 LYLMAHNLSTTGRKETLISRILTHMGK 623
YL AH L +G+K+ +ISRILTH+GK
Sbjct: 600 TYLTAHGLPVSGKKDAIISRILTHLGK 626
>gi|9802766|gb|AAF99835.1|AC051629_2 Hypothetical protein [Arabidopsis thaliana]
Length = 607
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/660 (60%), Positives = 484/660 (73%), Gaps = 90/660 (13%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
MELDPDDVFRD+DE+ +N+F+QE E+ E+HFHIA
Sbjct: 1 MELDPDDVFRDEDEDPENDFFQE-------------------------EEDKQESHFHIA 35
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
VSCIAQSLK IINR DE+AICFFNTR+KKNLQDLN V+VFNV ER+ +DRPTAR IKE
Sbjct: 36 VSCIAQSLKAHIINRSNDEIAICFFNTREKKNLQDLNGVYVFNVPERDSIDRPTARLIKE 95
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
FD IEESF+KEIGSQ GIVS SRENSLY+ALWVAQ LLRKGS KTADKR+ LFTNEDDPF
Sbjct: 96 FDLIEESFDKEIGSQTGIVSDSRENSLYSALWVAQALLRKGSLKTADKRMFLFTNEDDPF 155
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
GS++ + K DMTRTT+QRAKDAQDLGISIELLPLS PD++F ++ FY D+IGL D+L
Sbjct: 156 GSMRISVKEDMTRTTLQRAKDAQDLGISIELLPLSQPDKQFNITLFYKDLIGLNSDELTE 215
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
FMPS GQKLEDMKDQL+KR+ +KRI KRI+F+I +GLSIELN YAL+RP +PG+ITWLDS
Sbjct: 216 FMPSVGQKLEDMKDQLKKRVLAKRIAKRITFVICDGLSIELNGYALLRPAIPGSITWLDS 275
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
TN P+K ERS+IC DTGA+MQ+P +R QPYK +NI F+V+ELS++KR+STGHLRL GFK
Sbjct: 276 TTNLPVKVERSYICTDTGAIMQDPIQRIQPYKNQNIMFTVEELSQVKRISTGHLRLLGFK 335
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PLS LKDYHNL+PSTF++PSDKEV+GST FIALHRSM++L RFAVAFYG + PRLVAL
Sbjct: 336 PLSCLKDYHNLKPSTFLYPSDKEVIGSTRAFIALHRSMIQLERFAVAFYGGTTPPRLVAL 395
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
VAQ +V PG+ A PRASDD++KKA+ALM+R+
Sbjct: 396 VAQ--LVEFWQLHSKPGV----------------------AAPRASDDQLKKASALMRRL 431
Query: 481 DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-------------- 526
+LKDFSVCQFANP+LQRHYA+LQA+AL+E+++ E +DET+PDEEGM
Sbjct: 432 ELKDFSVCQFANPALQRHYAILQAIALDENELRETRDETLPDEEGMNRFSTNFHILLFNI 491
Query: 527 -----------------------ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRK 563
RP VVKA+E+FK S+YGD+ DEE D E S+KRK
Sbjct: 492 PSYKAKEKEKMLGTYRVSSISRSCRPAVVKAIEQFKQSIYGDDPDEESDSGAKEKSKKRK 551
Query: 564 AATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
A + K YD+ +LA GKLK++TV ELK YL A+NL +G+KE LI+RILTH+GK
Sbjct: 552 AGDADDGK----YDYIELAKTGKLKDLTVVELKTYLTANNLLVSGKKEVLINRILTHIGK 607
>gi|414591958|tpg|DAA42529.1| TPA: hypothetical protein ZEAMMB73_363757 [Zea mays]
Length = 907
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 329/628 (52%), Positives = 417/628 (66%), Gaps = 88/628 (14%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDP+ +FRDD +E ++ QE EA KE VVYLVDASPKMF+ +++ ETHFH
Sbjct: 1 MDLDPEGIFRDDSDEDEDSV-QEREANKEMVVYLVDASPKMFTPATTQDNEKQETHFHTI 59
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V+CI +SLKTQII R YDEVAICFFNT++KKNLQD V+V+NV +REQLDRPTA+ IK+
Sbjct: 60 VNCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYNVGDREQLDRPTAKLIKD 119
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F IE+SF IGS+YGI +GSREN+LYNALWVAQ LLRKGS KT
Sbjct: 120 FSLIEDSFMSTIGSRYGITAGSRENTLYNALWVAQALLRKGSVKT--------------- 164
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
DAQDLG+SIELLPLSPPD++F +S FYAD+IGL+GD++
Sbjct: 165 --------------------DAQDLGLSIELLPLSPPDDQFNMSLFYADLIGLDGDEMTE 204
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
++PSA D+ +++A+ L + +P I L
Sbjct: 205 YLPSA-----DLDG---------------VYLMAHILVSSGTRLGIAKPH-EYMILELKF 243
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
+++ ERSFIC DTGAL+Q+ RFQ Y +KFSV+ELSE+KRV++ HLRL GFK
Sbjct: 244 ISDLIEYVERSFICNDTGALLQDAQTRFQMYNDTIVKFSVRELSEVKRVASHHLRLIGFK 303
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVAL 420
PL LKDYHNLRPSTF++PSD+ + GSTC+F+ALH SMLRL RFA+AFYGNP+ P+L+AL
Sbjct: 304 PLDCLKDYHNLRPSTFIYPSDERIFGSTCVFVALHSSMLRLGRFALAFYGNPTRPQLIAL 363
Query: 421 VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
VAQ+E+ +G Q EPPGMHMIYLPYSDDIR EE+H +D PRA+D+++KKA+ + KRI
Sbjct: 364 VAQEEVTSSGRQFEPPGMHMIYLPYSDDIRYPEEVHVTSDDAPRATDEQIKKASNIFKRI 423
Query: 481 DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKL 540
DL +FS CQFANP + LQ+ +G PGV A+EEFK
Sbjct: 424 DLINFSACQFANPEI-----YLQS-------------------QGQL-PGVANAIEEFKT 458
Query: 541 SVYGDNYDE------EGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQE 594
SVYG+NYD+ G AS+KRK T+ AA+ A YDWA+LAD GKLKEMT E
Sbjct: 459 SVYGENYDQEEAEAAAGKASRGNASKKRKEVTDAAAQISAAYDWAELADNGKLKEMTTVE 518
Query: 595 LKLYLMAHNLSTTGRKETLISRILTHMG 622
L+ YL AH+L +G+K+ LISRILTH+G
Sbjct: 519 LRSYLTAHDLPVSGKKDVLISRILTHLG 546
>gi|302758744|ref|XP_002962795.1| hypothetical protein SELMODRAFT_78255 [Selaginella moellendorffii]
gi|300169656|gb|EFJ36258.1| hypothetical protein SELMODRAFT_78255 [Selaginella moellendorffii]
Length = 565
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/566 (50%), Positives = 396/566 (69%), Gaps = 12/566 (2%)
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDH 123
I + LKT+II+R DEV ICF NTR+K N V+ F ++L + +A FIK+
Sbjct: 4 ITEDLKTRIISRDSDEVGICFINTREKNNSLSSEGVYTF-----KELSKLSASFIKDTSS 58
Query: 124 IEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSI 183
+ E+F+ IGS G G+REN LYN LWVAQG+L K ++K KRILLFTN DDPF +
Sbjct: 59 LCENFDSVIGSNDGSNYGARENPLYNGLWVAQGMLGKSATKNLGKRILLFTNNDDPFENA 118
Query: 184 KGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMP 243
K DM RTT+QRAKD+QDLGISIEL P+S P EEF ++ FY DMI +E D+L+ FM
Sbjct: 119 DPVTKADMRRTTIQRAKDSQDLGISIELYPMSRPGEEFNLNIFYKDMITMEDDELSNFMV 178
Query: 244 SAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTN 303
A ++ E++K ++RK++F KR+V++I+F IANG SI L TYA++RP G WLDS TN
Sbjct: 179 GAEKRFEELKARMRKKLFQKRVVRKITFTIANGTSIGLGTYAMVRPATTGKYEWLDSTTN 238
Query: 304 HPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLS 363
P+K+ER+ IC DTGA++ E KRF Y + + + +EL+E+K+++ LRL GFK ++
Sbjct: 239 KPVKSERALICTDTGAIVTESTKRFTHYNSKRVLMTREELAEVKKITDVQLRLLGFKSIA 298
Query: 364 YLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQ 423
LKDYHNLRP+TF++PS++ + GSTC+FIALHRS++R +FA+AF+GN ++P LVALV Q
Sbjct: 299 CLKDYHNLRPATFLYPSEEAIKGSTCLFIALHRSLIRQKKFALAFHGNSTSPHLVALVPQ 358
Query: 424 DEIVRAGGQVEPPGMHMIYLPYSDDIR-PVEELHSDTDAVPRASDDEVKKAAALMKRIDL 482
+EIV GQV+PPGMHMIYLPY++DIR P + ++ V A+ + + KA AL+K++ L
Sbjct: 359 EEIVNEYGQVQPPGMHMIYLPYAEDIRQPEKVINLSKGGVEIAAKEHIDKAMALIKKLHL 418
Query: 483 KDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSV 542
++F+V NP+LQRHY+ LQAL L+ED + E++D T+PDEEGM RP +V V+ FK +V
Sbjct: 419 REFTVYDIQNPALQRHYSNLQALGLQEDTVEEVEDCTLPDEEGMKRPSIVAVVQAFKDTV 478
Query: 543 YGDNYDEEGD------VKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
YG ++D+E K S ++KRKAA E A KE Y+W LA G+LK++TV ELK
Sbjct: 479 YGADHDQEEAAAEAERAKGSVTAQKRKAAAEVATKESEKYNWRQLALDGELKKLTVVELK 538
Query: 597 LYLMAHNLSTTGRKETLISRILTHMG 622
YL L +G+KE LI RIL +G
Sbjct: 539 YYLAGKKLPLSGKKEILIERILNDLG 564
>gi|302758134|ref|XP_002962490.1| hypothetical protein SELMODRAFT_165509 [Selaginella moellendorffii]
gi|300169351|gb|EFJ35953.1| hypothetical protein SELMODRAFT_165509 [Selaginella moellendorffii]
Length = 564
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/565 (50%), Positives = 396/565 (70%), Gaps = 11/565 (1%)
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDH 123
I + LKT+II+R DEV ICF NTR+K N V+ F ++L + +A FIK+
Sbjct: 4 ITEDLKTRIISRDTDEVGICFINTREKNNSLSSEGVYTF-----KELSKLSASFIKDTSS 58
Query: 124 IEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSI 183
+ E+F+ IGS G G+REN LY+ LWVAQG+L K ++K KRILLFTN DDPF +
Sbjct: 59 LCENFDSVIGSNDGSNYGARENPLYSGLWVAQGMLGKSATKNLGKRILLFTNNDDPFENA 118
Query: 184 KGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMP 243
K DM RTT+QRAKD+QDLGISIEL P+S P EEF ++ FY DMI +E D+L+ FM
Sbjct: 119 DPVTKADMRRTTIQRAKDSQDLGISIELYPMSRPGEEFNLNIFYKDMITMEDDELSNFMV 178
Query: 244 SAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTN 303
A ++ E++K ++RK++F KR+V++I+F IANG SI L TYA++RP G WLDS TN
Sbjct: 179 GAEKRFEELKARMRKKLFQKRVVRKITFTIANGTSIGLGTYAMVRPATTGKYEWLDSTTN 238
Query: 304 HPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLS 363
P+K+ER+ IC DTGA++ E KRF Y + + + +EL+E+K+++ +RL GFK ++
Sbjct: 239 KPVKSERALICTDTGAIVTESTKRFTHYNSKRVLMTREELAEVKKITDVQVRLLGFKSIA 298
Query: 364 YLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQ 423
LKDYHNLRP+TF++PS++ + GSTC+FIALHRS++R +FA+AF+GN ++P LVALV Q
Sbjct: 299 CLKDYHNLRPATFLYPSEEAIKGSTCLFIALHRSLIRQKKFALAFHGNSTSPHLVALVPQ 358
Query: 424 DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK 483
+EIV GQV+PPGMHMIYLPY++DIR E+++ V A+ + + KA AL+K++ L+
Sbjct: 359 EEIVNEYGQVQPPGMHMIYLPYAEDIRQPEKINLSKGGVEIAAKEHIDKAMALIKKLHLR 418
Query: 484 DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVY 543
+F+V NP+LQRHY+ LQAL L+ED + +++D T+PDEEGM RP +V V+ FK +VY
Sbjct: 419 EFTVYDIQNPALQRHYSNLQALGLQEDTVEDVEDCTLPDEEGMKRPSIVAVVQAFKDTVY 478
Query: 544 GDNYDEEGD------VKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKL 597
G ++D+E K S ++KRKAA E A KE Y+W LA G+LK++TV ELK
Sbjct: 479 GADHDQEEAAAEAERAKGSVTAQKRKAAAEVATKESEKYNWRQLALDGELKKLTVVELKY 538
Query: 598 YLMAHNLSTTGRKETLISRILTHMG 622
YL L +G+KE LI RIL +G
Sbjct: 539 YLAGKKLPLSGKKEILIERILNDLG 563
>gi|218199202|gb|EEC81629.1| hypothetical protein OsI_25158 [Oryza sativa Indica Group]
Length = 433
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/413 (66%), Positives = 332/413 (80%), Gaps = 2/413 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDP+ +FRDD +E D+ QE EA KE VVYL+DASPKMF+ A D+ +ETHFH
Sbjct: 1 MDLDPEGLFRDDSDEDDDNV-QEREANKEMVVYLIDASPKMFTPATKA-DEKEETHFHTI 58
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V+CI +LKTQII R YDEVAICFFNT++KKNLQ+L V+V+NV ERE LDRP AR IKE
Sbjct: 59 VNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYNVTEREPLDRPDARLIKE 118
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F IE+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRI++FTNEDDPF
Sbjct: 119 FSCIEDSFMSNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRIVIFTNEDDPF 178
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
G + GA K DM RTT+QRA+DAQDLG+SIELLPLS PDEEF +S FYAD+IGLEGD++
Sbjct: 179 GGLTGAVKTDMIRTTIQRARDAQDLGLSIELLPLSRPDEEFNMSLFYADLIGLEGDEIVD 238
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
++PS+G+KLEDM +QL+KRM KR VK ++F I N + IE+NTYALIRPT PGAITWLDS
Sbjct: 239 YLPSSGEKLEDMTNQLKKRMMKKRKVKTLAFAITNDVCIEVNTYALIRPTTPGAITWLDS 298
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
++N PLK ERSFIC DTGAL+Q+P KRFQ Y + +KFS +ELS++KRVS+ HLRL GFK
Sbjct: 299 ISNLPLKAERSFICNDTGALLQDPQKRFQVYNDKIVKFSTRELSDVKRVSSHHLRLLGFK 358
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
PL YLKDYHNLRPSTF++PSD+++ GST +F+ALH SM RL + G+ S
Sbjct: 359 PLDYLKDYHNLRPSTFIYPSDEQIFGSTRVFVALHSSMRRLGSEGMQLKGDVS 411
>gi|168058549|ref|XP_001781270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667252|gb|EDQ53886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 606
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/605 (46%), Positives = 401/605 (66%), Gaps = 32/605 (5%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
A KEY+VYL+D+ M P E E+ A+ + ++LK +II R D+V ICFF
Sbjct: 27 ANKEYLVYLIDSGCDMM---LPFE--KGESCLKWAMKAVEENLKKRIIAR-DDKVGICFF 80
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
NT KKKN+Q+ + V+V++ +LD +A I+ F + SF+K+IGSQ + +RE+
Sbjct: 81 NTLKKKNIQEADGVYVWS-----ELDDLSAELIRNFRSLHGSFQKDIGSQVTAAANAREH 135
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGA-AKNDMTRTTMQRAKDAQD 204
L++ALWV Q +LR G K +K +++ TN DDPFG I A + D+ RTT+QRA DAQD
Sbjct: 136 PLHDALWVVQAMLRSGV-KNVEKSVVIITNNDDPFGDINDAFVRKDLERTTIQRALDAQD 194
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
LGI+IEL+ L+ PD+ F + FY + EG++ A + +D+ D LR+RM+ KR
Sbjct: 195 LGINIELVALNTPDKLFDKT-FYNMITQFEGNEDASQDSEPSSRFDDLVDTLRRRMYKKR 253
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
IV+++ + +G I L TYALIRP VP + ++DS N PLK ER++IC+DTGALM EP
Sbjct: 254 IVRKMLLTVGSGTEIALKTYALIRPAVPPSHIFVDSRNNQPLKIERTYICSDTGALMHEP 313
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
KRF+ Y+G+ + FSV ++S+IKR+S+ LRL GFK +S L+ YHNLRPSTF++P + V
Sbjct: 314 LKRFEEYQGKKVVFSVDDVSDIKRISSVQLRLLGFKSMSCLQPYHNLRPSTFIYPDEVAV 373
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLP 444
GSTC FIALHR+M+RLN++A+A + + +LVALVAQ+E G GM++IYLP
Sbjct: 374 KGSTCAFIALHRAMVRLNKYALACLSSRATFQLVALVAQEE---EGDSTN--GMNVIYLP 428
Query: 445 YSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQA 504
YSDDIRP E+ H+ + +AS+++V+ A L+K++ LK+FSV +P+LQ+ Y +++A
Sbjct: 429 YSDDIRPAEKYHTSISPISKASEEQVEMATDLIKKLHLKNFSVTDIQDPALQKQYRIIEA 488
Query: 505 LALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYD------EEGDVKVSEA 558
+ LEEDD+ EI+DET+PD + + R FK SV+G+ YD K A
Sbjct: 489 VGLEEDDISEIEDETLPDSKRIER-------YIFKNSVFGEQYDEEEAESAAAKEKGGAA 541
Query: 559 SRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
++KRKAA E AA E Y+W LAD GKLK +T ++LK+YL A+ L G+K+ LI+RIL
Sbjct: 542 AQKRKAAAELAATEAQEYNWVQLADAGKLKSLTTEQLKIYLRANGLPLLGKKDILINRIL 601
Query: 619 THMGK 623
TH+GK
Sbjct: 602 THLGK 606
>gi|357445167|ref|XP_003592861.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
gi|355481909|gb|AES63112.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
Length = 432
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/354 (64%), Positives = 284/354 (80%), Gaps = 8/354 (2%)
Query: 7 DVFRDDDEESD--NEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCI 64
D+FRDD+++ D N F +++ KE+VVYLVDASP MF TT +E + E+HF IA+SCI
Sbjct: 10 DIFRDDEDDPDAQNSFQNNNDSNKEFVVYLVDASPNMFITTSSSESEEQESHFQIALSCI 69
Query: 65 AQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAER--EQLDRPTARFIKEFD 122
+ SLK IIN+ D++AICFFNT++KKNLQDLN V+VF+VAE + LDRPTA+ IK+FD
Sbjct: 70 SDSLKAMIINKSLDQIAICFFNTKEKKNLQDLNGVYVFHVAEEGTDYLDRPTAKLIKQFD 129
Query: 123 HIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS 182
++ SF K IGSQ+G++SGSREN LYNA+WVAQ LLRKGS+KT DKRILLFTN+DDPFGS
Sbjct: 130 NLHHSFSKNIGSQHGVMSGSRENPLYNAIWVAQALLRKGSAKTIDKRILLFTNQDDPFGS 189
Query: 183 IKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFM 242
+KG K+DMTRTT+QRAKD QDLGI+IELLPLS PD+ F VS FY D+IGLEGDDL F+
Sbjct: 190 LKGPFKSDMTRTTLQRAKDTQDLGITIELLPLSFPDQTFDVSKFYVDLIGLEGDDLVNFV 249
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
SAG KLEDMKDQLRKRMF+KR V + F I +GLS+ELN+YALIRPT PGAITWLDS+T
Sbjct: 250 ASAGNKLEDMKDQLRKRMFTKRRVNKFKFTIVDGLSVELNSYALIRPTAPGAITWLDSIT 309
Query: 303 NHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
N PLK+ER+FICADTGALM+E +RF PYK K +++++ +K + + +
Sbjct: 310 NLPLKSERTFICADTGALMEESTRRFHPYK----KLDLEKIATLKSLQYTQIHI 359
>gi|34393280|dbj|BAC83190.1| putative DNA-dependent protein kinase 70 kda DNA-binding subunit
Ku70 [Oryza sativa Japonica Group]
Length = 331
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/331 (67%), Positives = 268/331 (80%), Gaps = 2/331 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDP+ +FRDD +E D+ QE EA KE VVYL+DASPKMF+ A D+ +ETHFH
Sbjct: 1 MDLDPEGLFRDDSDEDDDNV-QEREANKEMVVYLIDASPKMFTPATKA-DEKEETHFHTI 58
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V+CI +LKTQII R YDEVAICFFNT++KKNLQ+L V+V+NV ERE LDRP AR IKE
Sbjct: 59 VNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYNVTEREPLDRPDARLIKE 118
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F IE+SF IGS+YGI SGSREN+LYNALWVAQ LLRKGS KT KRI++FTNEDDPF
Sbjct: 119 FSCIEDSFMSNIGSRYGITSGSRENTLYNALWVAQALLRKGSVKTVSKRIVIFTNEDDPF 178
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
G + GA K DM RTT+QRA+DAQDLG+SIELLPLS PDEEF +S FYAD+IGLEGD++
Sbjct: 179 GGLTGAVKTDMIRTTIQRARDAQDLGLSIELLPLSRPDEEFNMSLFYADLIGLEGDEIVD 238
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
++PS+G+KLEDM +QL+KRM KR VK ++F I N + IE+NTYALIR T PGAITWLDS
Sbjct: 239 YLPSSGEKLEDMTNQLKKRMMKKRKVKTLAFAITNDVCIEVNTYALIRSTTPGAITWLDS 298
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPY 331
++N PLK ERSFIC DTGAL+Q+P KRFQ Y
Sbjct: 299 ISNLPLKAERSFICNDTGALIQDPQKRFQVY 329
>gi|293333730|ref|NP_001167807.1| uncharacterized protein LOC100381505 [Zea mays]
gi|223944085|gb|ACN26126.1| unknown [Zea mays]
Length = 300
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/299 (63%), Positives = 240/299 (80%), Gaps = 6/299 (2%)
Query: 331 YKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCI 390
Y +KFSV+ELSE+KRV++ HLRL GFKPL LKDYHNLRPSTF++PSD+ + GSTC+
Sbjct: 2 YNDTIVKFSVRELSEVKRVASHHLRLIGFKPLDCLKDYHNLRPSTFIYPSDERIFGSTCV 61
Query: 391 FIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
F+ALH SMLRL RFA+AFYGNP+ P+L+ALVAQ+E+ +G Q EPPGMHMIYLPYSDDIR
Sbjct: 62 FVALHSSMLRLGRFALAFYGNPTRPQLIALVAQEEVTSSGRQFEPPGMHMIYLPYSDDIR 121
Query: 451 PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEED 510
EE+H +D PRA+D+++KKA+ + KRIDL +FS CQFANP+LQRHY +L+ALAL ED
Sbjct: 122 YPEEVHVTSDDAPRATDEQIKKASNIFKRIDLINFSACQFANPALQRHYGILEALALGED 181
Query: 511 DMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDE------EGDVKVSEASRKRKA 564
+MP+IKDET+PDEEG+++PGV A+EEFK SVYG+NYD+ G AS+KRK
Sbjct: 182 EMPDIKDETLPDEEGLSKPGVANAIEEFKTSVYGENYDQEEAEAAAGKASRGNASKKRKE 241
Query: 565 ATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
T+ AA+ A YDWA+LAD GKLKEMT EL+ YL AH+L +G+K+ LISRILTH+GK
Sbjct: 242 VTDAAAQISAAYDWAELADNGKLKEMTTVELRSYLTAHDLPVSGKKDVLISRILTHLGK 300
>gi|414591956|tpg|DAA42527.1| TPA: hypothetical protein ZEAMMB73_363757 [Zea mays]
gi|414591957|tpg|DAA42528.1| TPA: hypothetical protein ZEAMMB73_363757 [Zea mays]
Length = 250
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/248 (67%), Positives = 203/248 (81%), Gaps = 1/248 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDP+ +FRDD +E ++ QE EA KE VVYLVDASPKMF+ +++ ETHFH
Sbjct: 1 MDLDPEGIFRDDSDEDEDSV-QEREANKEMVVYLVDASPKMFTPATTQDNEKQETHFHTI 59
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V+CI +SLKTQII R YDEVAICFFNT++KKNLQD V+V+NV +REQLDRPTA+ IK+
Sbjct: 60 VNCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYNVGDREQLDRPTAKLIKD 119
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F IE+SF IGS+YGI +GSREN+LYNALWVAQ LLRKGS KT KRIL+FTNEDDPF
Sbjct: 120 FSLIEDSFMSTIGSRYGITAGSRENTLYNALWVAQALLRKGSVKTVSKRILIFTNEDDPF 179
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL 240
G+I GA K DM RTT+QRAKDAQDLG+SIELLPLSPPD++F +S FYAD+IGL+GD++
Sbjct: 180 GTITGAVKTDMIRTTLQRAKDAQDLGLSIELLPLSPPDDQFNMSLFYADLIGLDGDEMTE 239
Query: 241 FMPSAGQK 248
++PSAG K
Sbjct: 240 YLPSAGDK 247
>gi|384249159|gb|EIE22641.1| ATP-dependent DNA helicase ii [Coccomyxa subellipsoidea C-169]
Length = 612
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 336/645 (52%), Gaps = 68/645 (10%)
Query: 7 DVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDE---THFHIAVSC 63
D DD + + F +E T++ V++L+D MF + + E T F +A+
Sbjct: 5 DYNADDVDAEEEGFEREFIPTRDNVIFLIDVQHSMFEGAGLKDTEGFEESDTWFDVALRV 64
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDH 123
+ LK II+ D++AI F+ TR +N + V+ + LD PTA+ I++ D
Sbjct: 65 AREFLKMHIISSDSDKIAIAFYGTRVTQNANNFENVYTL-----QDLDEPTAQRIRDLDS 119
Query: 124 I-EESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS 182
I E+ FE+ +GS + L N LW AQ LL GSSK A KR+++
Sbjct: 120 IREQEFEERVGS----APEKSPDHLKNGLWAAQQLLNSGSSK-AYKRLIV---------- 164
Query: 183 IKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLAL 240
RA + +++E+ PL P+ F + F+ ++ G + +
Sbjct: 165 --------------ARATTLHEANVTVEVFPLIKPERSFAMG-FWNHIVHAGEDAETGTS 209
Query: 241 FMPSAGQ--KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWL 298
F A +L+ + LR R + KR R + G + + YALI+P + +L
Sbjct: 210 FSEGADTLYRLQSLPGLLRHRGYRKRTAGRARLVFPEGFQLAVAMYALIQPATKSSPVYL 269
Query: 299 DSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKF---------SVQELSEIKRV 349
+V N PL+ E + IC DTGA++ E KR P K + K S QEL E+K V
Sbjct: 270 HAVKNEPLRIESALICQDTGAILTEVPKRMFPKKADAEKLAGRIPPVVISTQELRELKIV 329
Query: 350 STGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY 409
L L GFK S L+ +H R STFV+P + + GST FIALH +ML+ +R AV Y
Sbjct: 330 KDPGLYLLGFKARSCLRSWHTWRQSTFVYPDEHSMPGSTTAFIALHEAMLQADRIAVCTY 389
Query: 410 GNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAV---- 462
N PRLVAL+ AQ+E G QV PPGMHM++L ++DDIR E SD + V
Sbjct: 390 VRTRNSEPRLVALMAAQEEKDDYGEQVAPPGMHMLHLCFADDIRTPE---SDPNLVGTSF 446
Query: 463 PRASDDEVKKAAALMKRIDLKDFS-VCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
P AS+D++ A A++ ++ + D + V F NP LQRHY VL+ALAL E PE +D+ P
Sbjct: 447 PEASEDQIAAAEAMIDKLSMGDSAYVGMFQNPMLQRHYQVLEALALGELP-PEFEDKLQP 505
Query: 522 DEEGMARPGVVKAVEEFKLSVYGDNYDEEG-DVKVSEASRKRKAATENAA-KEC-ANYDW 578
D +GM G A++ F+ SVYG++YDE G K A +KR E A KE A++D+
Sbjct: 506 DIQGMQGVGGA-AIDAFRTSVYGNSYDEPGFGAKRPTAGKKRPNPEEEAVLKEAMADFDY 564
Query: 579 ADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
LA KG L ++ V ELK YL A+ L TG+K+ LI RI H+ K
Sbjct: 565 QGLAAKGTLGKLKVDELKKYLKANGLKLTGKKDELIQRITEHIEK 609
>gi|125599360|gb|EAZ38936.1| hypothetical protein OsJ_23357 [Oryza sativa Japonica Group]
Length = 594
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/245 (62%), Positives = 181/245 (73%), Gaps = 6/245 (2%)
Query: 29 EYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTR 88
E VVYL+DASPKMF+ A D+ +ETHFH V+CI +LKTQII R YDEVAICFFNT+
Sbjct: 268 EMVVYLIDASPKMFTPATKA-DEKEETHFHTIVNCITHALKTQIIGRSYDEVAICFFNTK 326
Query: 89 KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLY 148
+KKNLQ+L V+V+NV ERE LDRP AR IKEF IE+SF IGS+YGI SGSREN+LY
Sbjct: 327 EKKNLQELAGVYVYNVTEREPLDRPDARLIKEFSCIEDSFMSNIGSRYGITSGSRENTLY 386
Query: 149 NALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGIS 208
NALWVAQ LLRKGS KT KRI++FTNEDDPFG + GA K DM RTT+QRA+DAQDLG+S
Sbjct: 387 NALWVAQALLRKGSVKTVSKRIVIFTNEDDPFGGLTGAVKTDMIRTTIQRARDAQDLGLS 446
Query: 209 IELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR---I 265
IELLPLS PDEEF +S FYA +D + ++ + D++ K FS R
Sbjct: 447 IELLPLSRPDEEFNMSLFYAAERSFICNDTGALIQDPQKRFQVYNDKIVK--FSTRELSD 504
Query: 266 VKRIS 270
VKR+S
Sbjct: 505 VKRVS 509
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 95/140 (67%), Gaps = 13/140 (9%)
Query: 276 GLSIELNTYALIRPTVPGAITWLDSVTNHPL--KTERSFICADTGALMQEPAKRFQPYKG 333
GLSIEL L RP D N L ERSFIC DTGAL+Q+P KRFQ Y
Sbjct: 444 GLSIEL--LPLSRP---------DEEFNMSLFYAAERSFICNDTGALIQDPQKRFQVYND 492
Query: 334 ENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
+ +KFS +ELS++KRVS+ HLRL GFKPL YLKDYHNLRPSTF++PSD+++ GST +F+A
Sbjct: 493 KIVKFSTRELSDVKRVSSHHLRLLGFKPLDYLKDYHNLRPSTFIYPSDEQIFGSTRVFVA 552
Query: 394 LHRSMLRLNRFAVAFYGNPS 413
LH SM RL + G+ S
Sbjct: 553 LHSSMRRLGSEGMQLKGDVS 572
>gi|222636564|gb|EEE66696.1| hypothetical protein OsJ_23359 [Oryza sativa Japonica Group]
Length = 284
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 192/245 (78%), Gaps = 7/245 (2%)
Query: 386 GSTCIFIALHRSMLRL----NRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMI 441
G+TC A+ + L RFA+AFYGNP+ P+LVAL+AQ+E+ AGGQ+EPPG+HMI
Sbjct: 40 GATCEGEAVRAAAGDLAEGEGRFALAFYGNPTRPQLVALIAQEEVTSAGGQIEPPGIHMI 99
Query: 442 YLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAV 501
YLPYSDD+R EE+H +D PRA+D+++KKA+ L++RIDLK+FSVCQF+NP+LQRHY +
Sbjct: 100 YLPYSDDVRYPEEVHLTSDDAPRATDEQIKKASNLLRRIDLKNFSVCQFSNPALQRHYGI 159
Query: 502 LQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRK 561
L+ALAL ED+MP++KDET+PDEEG+ARP VVKAVEEFK SVYG+NYD+E + +
Sbjct: 160 LEALALGEDEMPDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGA 219
Query: 562 RKAA---TENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
K T+ AA++ A ++WA+LAD GKLK+MTV +LK YL AH L +G+KE L+SRIL
Sbjct: 220 SKKRKALTDAAAEKSAAHNWAELADTGKLKDMTVVDLKSYLSAHGLPVSGKKEALVSRIL 279
Query: 619 THMGK 623
TH+GK
Sbjct: 280 THLGK 284
>gi|218199203|gb|EEC81630.1| hypothetical protein OsI_25160 [Oryza sativa Indica Group]
Length = 284
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 184/225 (81%), Gaps = 3/225 (1%)
Query: 402 NRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
RFA+AFYGNP+ P+LVAL+AQ+E+ AGGQ+EPPG+HMIYLPYSDD+R EE+H +D
Sbjct: 60 GRFALAFYGNPTRPQLVALIAQEEVTSAGGQIEPPGIHMIYLPYSDDVRYPEEVHLTSDD 119
Query: 462 VPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
PRA+D+++KKA+ L++RIDLK+FSVCQF+NP+LQRHY +L+ALAL ED+MP++KDET+P
Sbjct: 120 APRATDEQIKKASNLLRRIDLKNFSVCQFSNPALQRHYGILEALALGEDEMPDVKDETLP 179
Query: 522 DEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA---TENAAKECANYDW 578
DEEG+ARP VVKAVEEFK SVYG+NYD+E + + K T+ AA++ A ++W
Sbjct: 180 DEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKRKALTDAAAEKSAAHNW 239
Query: 579 ADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
A+LAD GKLK+MTV +LK YL AH L +G+KE L+SRILTH+GK
Sbjct: 240 AELADTGKLKDMTVVDLKSYLSAHGLPVSGKKEALVSRILTHLGK 284
>gi|405970038|gb|EKC34975.1| ATP-dependent DNA helicase 2 subunit 1 [Crassostrea gigas]
Length = 607
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 315/603 (52%), Gaps = 38/603 (6%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKK 90
+++L+D S MF +++ +E+HF + + C +L+ +II+ D V I F+ T K
Sbjct: 31 LIFLIDCSKSMFDKDD-EDNEEEESHFQLCLRCAQTTLQNKIISSDKDLVGIVFYGTEKS 89
Query: 91 KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI----EESFEKEIGSQYGIVSGSRENS 146
+N D V+V+ + L++P A I E +++ +SFEK+ G S
Sbjct: 90 QNPSDFKHVYVY-----QGLEQPGAERILELENLIDDGMKSFEKDFGHNTAY-------S 137
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
L +ALW Q + S K KRI+LFTN D+P A + R +A D ++ G
Sbjct: 138 LNDALWTCQNMFANSSQKVGFKRIMLFTNNDNPH-----AGAPQLQRQAKTKAGDLKETG 192
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
I +EL+ L P+E F+V FY D++ DD + + ++LE++ ++R + KR +
Sbjct: 193 IELELMHLQKPNESFEVDKFYKDLLYSADDDFTE-LANPAERLEELLTRVRSKDHKKRAL 251
Query: 267 KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPA 325
+RI + GL + + Y L+RP L TN LKT +TG LM +
Sbjct: 252 RRIPLTLGPGLELGVGVYTLVRPCYKPTAVKLSRNTNEELKTHSKTYLRETGEVLMPQDL 311
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
K+ Q Y G+ I F E+++IK +L GFKP S LK Y++++P+ F++P + +
Sbjct: 312 KKAQTYGGKRISFENDEINQIKNFGETGFKLMGFKPSSLLKKYYHVKPAQFIYPDETTIT 371
Query: 386 GSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIY 442
GST +F AL + L + A+ Y + N PR VALV Q +E + Q+ PPG H+IY
Sbjct: 372 GSTTLFTALLKKSLERDVTAICKYISGKNFPPRFVALVPQEEEFDKQNVQISPPGFHVIY 431
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LP++DD R V+ + P+A ++V+KA ++K++ F+ F NPSLQ+++ +
Sbjct: 432 LPFADDFRKVK-----FEEQPKAGSEQVEKAKEMIKKMKFT-FNSENFENPSLQKYWRNI 485
Query: 503 QALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV-KVSEASR 560
+ALAL+ E++D T+PD+E M R G +A++ FK V+ Y+ K A+
Sbjct: 486 EALALDRTAPEEVEDFTLPDDERMLKRAG--EAIDNFKDMVFPSGYEPGAKKRKAGGATG 543
Query: 561 KRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLISRILT 619
A A A+ D A++G+L ++TV LK + ++ +G +K LI I
Sbjct: 544 NAAAKKAKTADASASIDVKKEAEEGRLGKLTVAVLKEIVKKEKITASGTKKADLIDAIND 603
Query: 620 HMG 622
H G
Sbjct: 604 HFG 606
>gi|196015567|ref|XP_002117640.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
gi|190579809|gb|EDV19898.1| hypothetical protein TRIADDRAFT_61626 [Trichoplax adhaerens]
Length = 619
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 308/610 (50%), Gaps = 44/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
A K+ ++ L+D S MF + D T F +++ C L +I++ D V I FF
Sbjct: 37 ANKDSLIMLIDCSMPMFRLS----GGNDLTPFQLSIKCTRSVLMNKIVSSDKDLVGIVFF 92
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
T K N D + V ++LD P A+ I E D + E G+ + G ++
Sbjct: 93 GTDKSGNPSDFKHIHVL-----QELDSPDAQRILELDTM---LADEDGTDFVENYGHNDD 144
Query: 146 -SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF-GSIKGAAKNDMTRTTMQRAKDAQ 203
S+ +ALW + K KRI+LFTN DDP G++ + R +AKD
Sbjct: 145 FSMNDALWTCSHMFSNSQQKIGHKRIMLFTNNDDPHEGNLS------LKRLAQTKAKDLN 198
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
D+GI IEL+ + + F ++ FY D+I + D+ +P A K +++ ++R + K
Sbjct: 199 DIGIEIELMHIQSANNIFDITKFYQDIITIPEDEDVGAVPDASGKFDELLIRVRAKDHKK 258
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA-LMQ 322
R + +I + L + + ++L RPT + LDS TN +KT IC DTG+ LM
Sbjct: 259 RSLMKIPLNLGQDLEVGVTIFSLCRPTSRPSYVQLDSKTNQVVKTVTKHICEDTGSELMA 318
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
K +Q + GE + F +E+ EIK L L GFKP + +K ++++RPS F++P +
Sbjct: 319 ADIKYYQTFGGERVIFEKEEVGEIKNFGKNGLTLMGFKPKNCVKRHYHVRPSYFIYPDES 378
Query: 383 EVVGSTCIFIA-----LHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIV-RAGGQVEPP 436
+ GST + A L R ++ + +F F S P+ VALV Q E++ QV PP
Sbjct: 379 VISGSTRLVSALLERTLARDVVAICKFVPRF---ASGPKFVALVPQKEVLDEHKVQVVPP 435
Query: 437 GMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQ 496
G ++++LPY++D R ++ + P +++V KA ++K + + ++ +F NP+LQ
Sbjct: 436 GFNVVFLPYAEDFRQLK-----YEETPAPMNEQVDKAKDIVKSLTFQ-YNPDKFENPALQ 489
Query: 497 RHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV 555
+HY+ L+ALAL+ D E D T PD E + R G + +F + + YD +K
Sbjct: 490 KHYSNLEALALDRDVPEEFIDYTEPDAENIDKRAG--HHINDFIELTFPEGYDASAGLK- 546
Query: 556 SEASRKRKAATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
RK +AT AK E + D + A KG L ++TV +LK + ++ G+K
Sbjct: 547 GATKRKTTSATGGTAKKVKQETSEIDVKEYAQKGLLSKLTVNDLKAFCKTADIKCQGKKA 606
Query: 612 TLISRILTHM 621
L++ + H
Sbjct: 607 DLVAAVAAHF 616
>gi|156407043|ref|XP_001641354.1| predicted protein [Nematostella vectensis]
gi|156228492|gb|EDO49291.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 303/600 (50%), Gaps = 32/600 (5%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
K+ +++ +D SP MF E F + + C LK +II+ D +AI FF T
Sbjct: 34 KDCLLFAIDCSPLMFKPV------NGEIPFQLVIKCAINVLKNKIISSDKDLMAIVFFAT 87
Query: 88 RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDH-IEESFEKEIGSQYGIVSGSRENS 146
K KN D V++ ++LD+P A I E + +E+ + S +G +G S
Sbjct: 88 EKHKNKTDFKHVYIL-----QELDQPDASRILELEKFLEDDNCNDFSSNFGHNTGF---S 139
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
L + LW + + + K + KRI+LFTN D P + + +A+D +++G
Sbjct: 140 LSDVLWTCSNIFSQCTQKVSHKRIMLFTNCDHPH-----IDDLHLQKRAKTKAEDLREVG 194
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
I+IELL + P F S FY D++ E D+ + +A +K E++ +++K+ KR +
Sbjct: 195 INIELLSMLPAGGSFDPSAFYQDIVVFEEDEDGR-ISNAAEKFEELLRRVQKKDHKKRSM 253
Query: 267 KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA-LMQEPA 325
I F I+ G+ +N + L R + LDS TN + +IC DTGA LM
Sbjct: 254 GSIPFTISEGVEFGVNIFNLCRSATKSSYVNLDSRTNEDCQVHTKYICKDTGAELMPTDI 313
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
K +Q + GE I F +E++ +K+ L L GFKP LK +++++P+ F++P +K +
Sbjct: 314 KFYQKFGGEKIIFEKEEVASMKKFGDPGLLLMGFKPRVTLKRFYHVKPAHFIYPDEKSIT 373
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIV-RAGGQVEPPGMHMIY 442
GST +F AL L + + Y + P VAL+ Q+E + QV PPG H+I+
Sbjct: 374 GSTTLFSALLTKCLDRDVVPICRYIPRGSAAPSFVALLPQEEEYDDSNVQVTPPGFHVIF 433
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LP++DD+R ++ P S+D+++KA +++++ F F NP+LQ+H+ L
Sbjct: 434 LPFADDMRKLKYPKK-----PEVSEDQIEKAQKIIRKLHFT-FDSTSFENPTLQKHFNSL 487
Query: 503 QALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKR 562
+ALAL+ D E+ D TVPD E + R + ++EFK VY +NYD E +
Sbjct: 488 EALALDRDAPEEVNDLTVPDVERIDRRA-GELLQEFKELVYPENYDPEAKAGAKRKAGAA 546
Query: 563 KAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
A + ++ D A G+L ++TV L+ + + +K L+ I H G
Sbjct: 547 GGAAKRGKQDGQPVDIRQEALSGRLSKLTVPVLREFAKQEGIKCGTKKADLVDAINRHFG 606
>gi|449675950|ref|XP_002160929.2| PREDICTED: X-ray repair cross-complementing protein 5-like [Hydra
magnipapillata]
Length = 603
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 306/591 (51%), Gaps = 40/591 (6%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTD-ETHFHIAVSCIAQSLKTQIINRLYDEVAICFFN 86
++ V++L+DA+ M E+ D T F C+ L ++II+R D + + F
Sbjct: 33 RDSVIFLIDATESM------VENSIDGATLFQTCFKCLHSVLLSKIISREKDLIGVVLFG 86
Query: 87 TRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENS 146
T KKN D + N+ E + LD P A I + +++ EK I + S S
Sbjct: 87 TNVKKNESDFD-----NIYEYQSLDMPEANQILKVENLLS--EKPIKEFIKHLGHSNSFS 139
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
+ ALW + S K K ILLFT DDP + ++ + ++R +D DLG
Sbjct: 140 ISEALWACSSMFANSSYKLGKKTILLFTTTDDPHSN-----NLNLKKQALKRGRDLSDLG 194
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
I ++L+ L + F VS FY D+I E D L PS +K E++ ++R + +KR V
Sbjct: 195 IDLQLMHLKKENHHFDVSAFYKDLINTE-DYNTLIDPS--EKFEELLTRVRIKSHNKRTV 251
Query: 267 KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPA 325
R+ F + + ++ Y L + G+ +D TN ++ + C DTG L+
Sbjct: 252 CRLLFFFNDSIKFGVSMYILNKLCTKGSHVNIDRRTNEEVQCSTKYFCKDTGLELLSTDI 311
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
K +Q + GE + F +E+ ++K L GFK + YLKD+++++PS+F++P + +
Sbjct: 312 KCYQNFGGEKVIFEKEEVDKMKAFIEPGFHLLGFKKIKYLKDFYHIKPSSFIYPDENSYL 371
Query: 386 GSTCIFIALHRSML--RLNRFAVAFYGNPSNPRLVALVAQDEI-VRAGGQVEPPGMHMIY 442
GS+ IF L + + ++ V S PR VAL+ Q E+ + QV PG H+IY
Sbjct: 372 GSSNIFATLLKRCVVKKVLPICVLVSSTFSCPRFVALMPQTELDDKKSAQVNAPGFHVIY 431
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LPYS+DIR ++ + RA+DD+V KA L++++++ D+S+ F NPS+Q+ Y L
Sbjct: 432 LPYSEDIRKLK-----LENRSRANDDQVDKAKKLIEKLNI-DYSISMFENPSIQKFYRCL 485
Query: 503 QALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNY--DEEGDVKVSEASR 560
+A AL+ ++M E D T+P + M + K ++EFK V+ ++Y ++ G+ SE+
Sbjct: 486 EAYALDREEMDEFIDSTLPKVDYMEKDA-SKEIQEFKEIVFPEDYNTNKRGNSSTSESVS 544
Query: 561 KRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
K+ E + D +A G L ++TV ++K++ + + ++ +K+
Sbjct: 545 KKVKCDETSE-----VDIEAVARNGLLNKLTVSQMKIFCQKNKIKSSSQKK 590
>gi|449283293|gb|EMC89970.1| ATP-dependent DNA helicase 2 subunit 1, partial [Columba livia]
Length = 602
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 305/604 (50%), Gaps = 52/604 (8%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDE-THFHIAVSCIAQSLKTQIINRLYDEVAICF 84
+ ++ +++LVDAS MF E + DE T F + + CI ++II+ D +++ F
Sbjct: 26 SGRDSLIFLVDASKAMF------ESEEDEVTPFDMTIQCIRNVYTSKIISSDKDLLSVVF 79
Query: 85 FNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI-----EESFEKEIGSQYGIV 139
+ T K KNL D ++V ++LD P A+ + E D + F + G
Sbjct: 80 YGTEKNKNLADFKHIYVL-----QELDNPGAKRVLELDQYRGDKGQALFRETFGH----- 129
Query: 140 SGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+ + SL ALW L + + KRI+LFTNEDDP S +AK + RT RA
Sbjct: 130 --NADYSLGEALWACSNLFSDVRIRLSHKRIMLFTNEDDPHAS--DSAKAKLART---RA 182
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKR 259
D +D GI ++L+ L P F +S FY D+I + D+ P KLE ++ ++R +
Sbjct: 183 GDLRDTGIILDLMHLKKPGG-FDISLFYRDIINVAEDEDLGIQPEESGKLEHLRKKVRAK 241
Query: 260 MFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA 319
KR++ R++ + LS+ + Y L++ L TN P+KT+ TG+
Sbjct: 242 ETKKRVLVRLNLYLNKDLSLSVGVYNLLQKAYKPYPVKLYRETNEPVKTKTRMFNGKTGS 301
Query: 320 LM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVF 378
L+ KR Q Y I E E+KR + L L GFKPLS LK +H++RPS F++
Sbjct: 302 LLVPSDTKRAQTYGNRQIVLEKDETEELKRFDSPGLFLIGFKPLSMLKLHHHVRPSQFIY 361
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV-RAGGQVEP 435
P + + GST +F AL L A+ Y N PR VALV Q+E V Q+ P
Sbjct: 362 PEESVISGSTTLFNALLMKCLEKEVMALCRYTTRRNTPPRFVALVPQEEEVDEQKVQIAP 421
Query: 436 PGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSL 495
PG H+I+LPY+DD R V+ T+ VP AS ++V K +++++ + + F NP L
Sbjct: 422 PGFHIIFLPYADDKRNVDF----TEKVP-ASREQVDKMKEIIQKLRFR-YRTDSFENPVL 475
Query: 496 QRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV 555
Q+H+ L+ALAL+ + + +D T+P E M R + VEEFK VY +Y+ +G
Sbjct: 476 QQHFRNLEALALDMLEPEQAEDLTMPKNEEMNR-RLGSLVEEFKQLVYPPDYNPDG---- 530
Query: 556 SEASRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRK 610
KRK A++ A E + + KG L ++TV LK + L G+K
Sbjct: 531 --KGVKRKQASDGQADKRPKVEISKDELRRHVQKGTLGKLTVPVLKDACRLYGLKGGGKK 588
Query: 611 ETLI 614
+ L+
Sbjct: 589 QELM 592
>gi|45382537|ref|NP_990258.1| X-ray repair cross-complementing protein 5 precursor [Gallus
gallus]
gi|6225596|sp|O93257.1|XRCC6_CHICK RecName: Full=X-ray repair cross-complementing protein 5; AltName:
Full=5'-deoxyribose-5-phosphate lyase Ku70;
Short=5'-dRP/AP lyase Ku70; AltName: Full=ATP-dependent
DNA helicase 2 subunit 1; AltName: Full=ATP-dependent
DNA helicase II 70 kDa subunit; AltName: Full=DNA repair
protein XRCC6; AltName: Full=Ku autoantigen protein p70
homolog; Short=Ku70
gi|3374509|dbj|BAA32018.1| Ku70 [Gallus gallus]
Length = 632
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 302/602 (50%), Gaps = 46/602 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF P E++ T F + + CI ++II+ D +++ F+
Sbjct: 54 SGRDSLIFLVDASKAMFE---PYENEEAATPFDMTMQCIRNVYTSKIISSDKDLLSVVFY 110
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEES-----FEKEIGSQYGIVS 140
KN D ++V ++LD P A+ I E D F + G
Sbjct: 111 GMENNKNSADFKHIYVL-----QELDNPGAKRILELDQYRGDEGRVLFRETFGH------ 159
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
+ + SL ALW L + + KRI+LFTNED+P + +AK + RT RA
Sbjct: 160 -NADYSLGEALWACSNLFSDVRVRLSHKRIMLFTNEDNPHAN--DSAKAKLART---RAG 213
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRM 260
D +D GI ++L+ L P F +S FY D+I + D+ P KLE + ++R +
Sbjct: 214 DLRDTGIILDLMHLKKPGG-FDISLFYRDIINVAEDEDLGIQPDESGKLEHLMKKVRAKE 272
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL 320
KR + R++ + LS + Y LI+ L TN P+KT+ TG+L
Sbjct: 273 TRKRALSRLNLYLNKDLSFSVGVYNLIQKAYKPYPVKLYRETNEPVKTKTRVFNGKTGSL 332
Query: 321 M-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
+ KR Q Y I +E E+KR + L L GFKPLS LK +H++RPS F++P
Sbjct: 333 LLPSDTKRAQTYGNRQIAMEKEETEEVKRFDSPGLFLIGFKPLSMLKQHHHIRPSQFMYP 392
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV-RAGGQVEPP 436
+ V GST +F AL L A+ Y N PR+VAL+ Q+E V Q+ PP
Sbjct: 393 EESLVTGSTTLFNALLMKCLEKEVMALCRYIARRNTPPRIVALIPQEEEVDEQKVQIAPP 452
Query: 437 GMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQ 496
G H+I+LPY+DD R V+ T+ VP A+ ++V K +++++ K + F NP LQ
Sbjct: 453 GFHIIFLPYADDKRNVDF----TEKVP-ANREQVDKMKGIIQKLRFK-YRTDSFENPVLQ 506
Query: 497 RHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVS 556
+H+ L+ALAL+ + + +D T+P E M+R + VEEFK VY +Y EG
Sbjct: 507 QHFRNLEALALDMLEPEQAEDLTMPKTEEMSR-RLGNLVEEFKQLVYPPDYSPEG----- 560
Query: 557 EASRKRKAATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKET 612
+A+++++A A K E + G L ++TV LK + L + G+K+
Sbjct: 561 KAAKRKQAGDAQAEKRPKIEISEDSLRSYVQNGTLGKLTVSALKDTCRHYGLRSGGKKQE 620
Query: 613 LI 614
LI
Sbjct: 621 LI 622
>gi|326672311|ref|XP_003199637.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Danio
rerio]
Length = 610
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 319/610 (52%), Gaps = 40/610 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +V+LVDAS +MF + + ++F + + C+ ++II+ D VA+ F+
Sbjct: 29 SGRDSLVFLVDASKEMFIKG----ENGEPSNFDMTMQCVRSVYTSKIISSDRDLVALVFY 84
Query: 86 NTRKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG-IVSGSR 143
T + KN ++ V+V++ L+ P A+ +++ D ++ + G Q+ GS
Sbjct: 85 GTEQSKNPRNSFKHVYVYH-----DLESPGAKRVQDIDKLK----GDKGGQFAEKTMGSG 135
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
E SL ALW L + + KR+++FT D+P G +AK+ RT +A D +
Sbjct: 136 ETSLGEALWCCSNLYSDIKLRLSHKRLMIFTCRDEPHGG--DSAKDRQART---KAADLK 190
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGD--DLALFMPSAGQKLEDMKDQLRKRMF 261
+ G++I+L+ LS P F VS F+ D++ D DL L + +KLED++ ++R +
Sbjct: 191 ETGVAIDLMHLSKPGG-FDVSLFFCDIVSPPEDESDLGLQIEPC-RKLEDLQKRVRAKEL 248
Query: 262 SKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGAL 320
KR R++F + G+ + + Y L R + + L N P++T+ R F G L
Sbjct: 249 KKRAQCRLTFSLGEGVDLAVGVYVLARTAMKPSAVKLYRDNNEPVRTKSRLFHTQTGGIL 308
Query: 321 MQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPS 380
+ KR Q Y + I E+ EIK+ L L GFKP+ LK +H+LRP+ F++P
Sbjct: 309 LPNDTKRAQVYGQKQIVMEKDEVDEIKKFDDPGLVLIGFKPIDRLKLHHHLRPALFIYPE 368
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPG 437
++++ GS+C+F AL N FA+ Y N PR VALV Q +E+ ++ Q PPG
Sbjct: 369 EEQISGSSCMFTALLLKCCEKNVFALCKYIPRRNTPPRFVALVPQREELDQSQTQATPPG 428
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQR 497
H+IYLP++DDIR V D P ASD++V K ++ ++ K + F NP LQ+
Sbjct: 429 FHVIYLPFADDIRTV-----DPHVGPTASDEQVDKMKEIVHKLRFK-YRSDAFENPVLQQ 482
Query: 498 HYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGD--VK 554
HY+ L+ALAL+ I+D T+P + M R G + V+EFK VY +Y+ EG K
Sbjct: 483 HYSNLEALALDMLSPEPIEDLTMPKVKMMDDRLGPL--VQEFKDLVYPPDYNPEGKPAAK 540
Query: 555 VSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETL 613
A AA + A E + + KG L ++TV LK N+ TTG +K+ L
Sbjct: 541 RKPAESGGGAAEKKAKVEISEEELKIHVAKGTLGKLTVPVLKDACKQFNIRTTGTKKQEL 600
Query: 614 ISRILTHMGK 623
I + + K
Sbjct: 601 IDALTMQLSK 610
>gi|158253919|gb|AAI54333.1| Xrcc6 protein [Danio rerio]
Length = 610
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 318/609 (52%), Gaps = 38/609 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +V+LVDAS +MF + + ++F + + C+ ++II+ D VA+ F+
Sbjct: 29 SGRDSLVFLVDASKEMFIKG----ENGEPSNFDMTMQCVRSVYTSKIISSDRDLVALVFY 84
Query: 86 NTRKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG-IVSGSR 143
T + KN ++ V+V++ L+ P A+ +++ D ++ + G Q+ GS
Sbjct: 85 GTEQSKNPRNSFKHVYVYH-----DLESPGAKRVQDIDKLK----GDKGGQFAEKTMGSG 135
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
E SL ALW L + + KR+++FT D+P G +AK+ RT +A D +
Sbjct: 136 ETSLGEALWCCSNLYSDIKLRLSHKRLMIFTCRDEPHGG--DSAKDRQART---KAADLK 190
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMP-SAGQKLEDMKDQLRKRMFS 262
+ G++I+L+ LS P F VS F+ D++ D+ L + +KLED++ ++R +
Sbjct: 191 ETGVAIDLMHLSKPGG-FDVSLFFCDIVSPPEDESELGLQIEPCRKLEDLQKRVRAKELK 249
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR R++F + G+ + + Y L R + + L N P++T+ R F G L+
Sbjct: 250 KRAQCRLTFSLGEGVDLAVGVYVLARTAMKPSAVKLYRDNNEPVRTKSRLFHTQTGGILL 309
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y + I E+ EIK+ L L GFKP+ LK +H+LRP+ F++P +
Sbjct: 310 PNDTKRAQVYGQKQIVMEKDEVDEIKKFDDPGLVLIGFKPIDRLKLHHHLRPALFIYPEE 369
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
+++ GS+C+F AL N FA+ Y N PR VALV Q +E+ ++ Q PPG
Sbjct: 370 EQISGSSCMFTALLLKCCEKNVFALCKYIPRRNTPPRFVALVPQREELDQSQTQATPPGF 429
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
H+IYLP++DDIR V D P ASD++V K ++ ++ K + F NP LQ+H
Sbjct: 430 HVIYLPFADDIRTV-----DPHVGPTASDEQVDKMKEIVHKLRFK-YRSDAFENPVLQQH 483
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGD--VKV 555
Y+ L+ALAL+ I+D T+P + M R G + V+EFK VY +Y+ EG K
Sbjct: 484 YSNLEALALDMLSPEPIEDLTMPKVKMMDDRLGPL--VQEFKDLVYPPDYNPEGKPAAKR 541
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLI 614
A AA + A E + + KG L ++TV LK N+ TTG +K+ LI
Sbjct: 542 KPAESGGGAAEKKAKVEISEEELKIHVAKGTLGKLTVPVLKDACKQFNIRTTGTKKQELI 601
Query: 615 SRILTHMGK 623
+ + K
Sbjct: 602 DALTMQLSK 610
>gi|260805378|ref|XP_002597564.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
gi|229282829|gb|EEN53576.1| hypothetical protein BRAFLDRAFT_281658 [Branchiostoma floridae]
Length = 613
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 301/607 (49%), Gaps = 47/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++L+D S MF E+ +++ FH V C+ +++ +II+ D V + FF
Sbjct: 40 SLRDSLIFLIDCSASMFQ-----EEGEEDSAFHKCVKCVHSAMRNKIISNDRDLVGVVFF 94
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-----ESFEKEIGSQYGIVS 140
T K KN D V++F + LD P A+ I E + I E FE+E G
Sbjct: 95 ATNKHKNPSDFKHVYIF-----QDLDVPGAQMILELEEIFEEDGVERFEEEFGH------ 143
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
S + S+ LW + + K KR+LLFTN DDP A ++ R +AK
Sbjct: 144 -STDFSMSEVLWNCSNMFSTCTQKLGHKRLLLFTNNDDPH-----AGNINLQRQAKTKAK 197
Query: 201 DAQDLGISIELLPLSPPD-EEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKR 259
D + LGI+ ELL ++ P E F ++ FY D+I + D+ +P K E++ ++
Sbjct: 198 DLEGLGINTELLHMNKPGGEPFDITKFYQDIIVIPEDEDVTCLPDPAAKFEELLERQVNS 257
Query: 260 MFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA 319
KR + R+ + GL + Y +R T G LD+ TN ++T + ++TG
Sbjct: 258 EHKKRTLARVPLSLGEGLEFGVGIYTQVRETYKGRKVKLDARTNQEVRTITKTVDSETGK 317
Query: 320 -LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVF 378
LM K+ Q + G +I F E+ E+K L L GFKP + LK Y ++RP+ F+F
Sbjct: 318 FLMPSDIKKVQTWGGRDIAFENDEIVEMKVFDKPGLVLMGFKPRTSLKPYFHIRPAQFLF 377
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEP 435
P + + GST +F AL + L + + Y N P+ VAL+ Q +E Q P
Sbjct: 378 PDESVISGSTRLFSALLQRCLARDVVPICRYIPRKNSPPKFVALLPQKEEFDDNNMQSTP 437
Query: 436 PGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSL 495
G H+++LP++DD+R + + + PRA D+V KA ++ ++ K + F NP +
Sbjct: 438 AGFHVVFLPFADDLRKL-----NFEDTPRAKQDQVDKAKEIINKLKFK-YDPMSFENPVI 491
Query: 496 QRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV 555
Q+HY L+ALAL+ D E+ D T PD+E + R ++EFK V+ D Y
Sbjct: 492 QQHYRNLEALALDRDAPEEVYDFTQPDKERIDR-RAGPLIDEFKDIVFPDGY-------T 543
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLI 614
A KRK A AA++ D +A G L ++TV LK + + TG +K+ +I
Sbjct: 544 PGAKPKRKTAAATAAEQVTEADIKRMAQAGTLGKLTVPVLKEFCKQSGVKVTGNKKQDVI 603
Query: 615 SRILTHM 621
I H
Sbjct: 604 DAITEHF 610
>gi|114215700|gb|ABI54461.1| Ku70 autoantigen [Danio rerio]
Length = 610
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 318/609 (52%), Gaps = 38/609 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +V+LVDAS +MF + + ++F + + C+ ++II+ D VA+ F+
Sbjct: 29 SGRDSLVFLVDASKEMFIKG----ENGEPSNFDMTMQCVRSVYTSKIISSDRDLVALVFY 84
Query: 86 NTRKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG-IVSGSR 143
T + KN ++ V+V++ L+ P A+ +++ D ++ + G Q+ GS
Sbjct: 85 GTEQSKNPRNSFKHVYVYH-----DLESPGAKRVQDIDKLK----GDKGGQFAEKTMGSG 135
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
E SL ALW L + + KR+++FT D+P G +AK+ RT +A D +
Sbjct: 136 ETSLGEALWCCSNLYSDIKLRLSHKRLMIFTCRDEPHGG--DSAKDRQART---KAADLK 190
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMP-SAGQKLEDMKDQLRKRMFS 262
+ G++I+L+ LS P F VS F+ D++ D+ L + +KLED++ ++R +
Sbjct: 191 ETGVAIDLMHLSKPGG-FDVSLFFCDIVSPPEDESELGLQIEPCRKLEDLQKRVRAKELK 249
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR R++F + G+ + + Y L R + + L N P++T+ R F G L+
Sbjct: 250 KRAQCRLTFSLGEGVDLAVGVYVLARTAMKPSAVKLYRDNNEPVRTKSRLFHTQTGGILL 309
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y + I E+ EIK+ L L GFKP+ LK +H+LRP+ F++P +
Sbjct: 310 PNDTKRAQVYGQKQIVMEKDEVDEIKKFDDPGLVLIGFKPIDRLKLHHHLRPALFIYPEE 369
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
+++ GS+C+F AL N FA+ Y N PR VALV Q +E+ ++ Q PPG
Sbjct: 370 EQISGSSCMFTALLLKCCEKNVFALCKYIPRRNTPPRFVALVPQREELDQSQTQATPPGF 429
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
H+IYLP++DDIR V D P ASD++V K ++ ++ K + F NP LQ+H
Sbjct: 430 HVIYLPFADDIRTV-----DPHVGPTASDEQVDKMKEIVHKLRFK-YRSDAFENPVLQQH 483
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGD--VKV 555
Y+ L+ALAL+ I+D T+P + M R G + V+EFK VY +Y+ EG K
Sbjct: 484 YSNLEALALDMLSPEPIEDLTMPKVKMMDDRLGPL--VQEFKDLVYPRDYNPEGKPAAKR 541
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLI 614
A AA + A E + + KG L ++TV LK N+ TTG +K+ LI
Sbjct: 542 KPAESGGGAAEKKAKVEISEEELKIHVAKGTLGKLTVPVLKDACKQFNIRTTGTKKQELI 601
Query: 615 SRILTHMGK 623
+ + K
Sbjct: 602 DALTMQLSK 610
>gi|326912013|ref|XP_003202349.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Meleagris gallopavo]
Length = 614
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 300/602 (49%), Gaps = 46/602 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF P ED+ T F + + CI ++II+ D +++ F+
Sbjct: 36 SGRDSLIFLVDASKAMFE---PYEDEEAATPFDMTMQCIRNVYTSKIISSDKDFLSVVFY 92
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEES-----FEKEIGSQYGIVS 140
T KN V+V ++LD P A+ I E D F + G
Sbjct: 93 GTENNKNSAGFKHVYVL-----QELDNPGAKRILELDQYRGDEGRLLFRESFGH------ 141
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
+ + SL ALW L + + KRI+LFTNED+P + AK + RT RA
Sbjct: 142 -NADYSLGEALWACSNLFSNVQVRLSHKRIMLFTNEDNPHANDNAKAK--LART---RAG 195
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRM 260
D +D GI ++L+ L F +S FY D+I + D+ P KLE + ++R +
Sbjct: 196 DLRDTGIILDLMHLKKLGG-FDISLFYRDIINIAEDEDLGIQPDESGKLEHLMKKVRAKE 254
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL 320
KR + R++ + LS + Y LI+ L TN P+KT+ TG+L
Sbjct: 255 ARKRALVRLNLYLNKDLSFSVGVYNLIQKAYKPYPVKLYRETNEPVKTKTRVFNGKTGSL 314
Query: 321 M-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
+ K+ Q Y I +E E+KR + L L GFKPLS LK +H++RPS F++P
Sbjct: 315 LLPSDTKKAQTYGSRQIVMEKEETEEVKRFDSPGLFLIGFKPLSMLKQHHHIRPSQFIYP 374
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPP 436
+ V GST +F AL L A+ Y N PR VALV Q +E+ Q+ PP
Sbjct: 375 EESLVTGSTTLFNALLMKCLEKEVMALCRYIARRNTPPRFVALVPQEEELDEQKVQIAPP 434
Query: 437 GMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQ 496
G H+I+LPY+DD R V+ T+ VP A+ ++V K +++++ K + F NP LQ
Sbjct: 435 GFHIIFLPYADDKRNVDF----TEKVP-ANREQVDKMKEIIQKLRFK-YRTDSFENPVLQ 488
Query: 497 RHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVS 556
+H+ L+ALAL+ + + +D T+P E M+R + VEEFK VY +Y+ EG
Sbjct: 489 QHFRNLEALALDMLEPEQAEDLTMPKTEEMSR-RLGNLVEEFKQLVYPPDYNPEG----- 542
Query: 557 EASRKRKAATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKET 612
+A+++++A A K E + G L ++TV LK + L + G+K+
Sbjct: 543 KAAKRKQAGDGQAEKKPKTEISEDSLRSYVQNGTLGKLTVSALKDMCRHYRLRSGGKKQE 602
Query: 613 LI 614
LI
Sbjct: 603 LI 604
>gi|301103284|ref|XP_002900728.1| ATP-dependent DNA helicase 2 subunit, putative [Phytophthora
infestans T30-4]
gi|262101483|gb|EEY59535.1| ATP-dependent DNA helicase 2 subunit, putative [Phytophthora
infestans T30-4]
Length = 607
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 203/628 (32%), Positives = 319/628 (50%), Gaps = 60/628 (9%)
Query: 16 SDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINR 75
D E ++ E+ K+ ++ L+D MFS + T FH V + + LK++++
Sbjct: 17 GDEEDWELPESGKDALIVLLDVREAMFSPYPHMTAKAPSTWFHAIVELVIKLLKSKVVAS 76
Query: 76 LYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
+++ FF K+ L V+ F + L P+A+ IK+ + E ++ ++
Sbjct: 77 DNSLLSVVFFGANKRGEAGTLEQVYEF-----QPLGFPSAQRIKDLQAL---LETDVQAE 128
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTAD-KRILLFTNEDDPFGSIKGAAKNDMTRT 194
+ + S + S NALW + K D +RI +FTN+D P +G ++ R
Sbjct: 129 FQSMQNSEKLSFSNALWQCGISFSDANLKKKDSQRIWVFTNDDSP----EGPDAEEVGRI 184
Query: 195 TMQRAKDAQDLGISIELLPLSPPDEE-FKVSHFYA----DMIGLEGDDL----ALFMPS- 244
Q ++ +L ++ L ++PP +E F +S FY D E +++ A F P+
Sbjct: 185 KKQ-VQNHTELKRTLNLFYITPPGKESFDLSKFYGCSFQDFSAEENEEIVGNEAFFQPAF 243
Query: 245 AGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI---RPTVPGAITWLDSV 301
L+D+ D ++ F KR + I G+SI + YAL+ R P A LD+
Sbjct: 244 PVGSLDDLMDGSLRKRFRKRRLTTFPLHITKGVSIGVELYALVVVQRKNTPVA---LDAS 300
Query: 302 TNHPLKTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
TN PLKTE ++C DTGA L + K++ Y G+ + F+ ++ EIK L++ FK
Sbjct: 301 TNTPLKTETKWLCEDTGAYLTPDQIKKYIDYGGKRVYFTRDDVVEIKHYDAPGLQIICFK 360
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA--FYGNPSNPRLV 418
PLS LK N+R FV+PSD + GS+ F+A+ SM+R +FA+A S PRLV
Sbjct: 361 PLSSLKWNENIRSPYFVYPSDGYIEGSSTAFMAILSSMVRKQKFALARLIARKTSEPRLV 420
Query: 419 ALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMK 478
ALV Q+E GQV+P G+++I+LPY DDIR D A P +++ A L+
Sbjct: 421 ALVPQEEENDEMGQVQPSGLNVIFLPYLDDIR-------DISAEP----EKIDAAKQLIS 469
Query: 479 RIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMP--EIKDETVPDEEGMARPGVVKAVE 536
++ L + F NP LQ+H+A +QALAL+E+ + E KD T+PD EG + A+
Sbjct: 470 KLKLTE--APSFENPDLQKHFAAIQALALDEETLEFDETKDTTLPDAEGFGQDE--DAIT 525
Query: 537 EFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYD---WADLADKGKLKEMTVQ 593
FK G+ D VS A+ KRKA + N + +D WA L +++ TV
Sbjct: 526 NFKDVCGGELLD------VSTAA-KRKAGSSNKPEAEETFDKNEWAALVASNAIQKKTVA 578
Query: 594 ELKLYLMAHNLSTTGRKETLISRILTHM 621
+LK +L AH L+ GRK LI + + M
Sbjct: 579 QLKAFLHAHGLAAVGRKAELIDAVKSFM 606
>gi|281204870|gb|EFA79065.1| ATP-dependent DNA helicase [Polysphondylium pallidum PN500]
Length = 775
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 306/615 (49%), Gaps = 50/615 (8%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKT 70
+DD+E +++ ++ +++L+D S MF + T E F A+ C+ Q++
Sbjct: 48 NDDDEQQQANAYQYQVMRDCIIFLIDTSKAMFE----PDPVTKEKPFDNAIKCLIQTITD 103
Query: 71 QIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK 130
+II D + +C +NT K KNL D ++V LD P + I + I E
Sbjct: 104 KIITSDSDLIGLCLYNTDKNKNLNDFENIYVL-----FDLDIPDPKTILLLEDILEG--- 155
Query: 131 EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
S +G + +++ +ALW + + K + KRI LFTN+D P ND
Sbjct: 156 -DYSSFGGYTENKDMVFCDALWTCSTMFSNCNIKLSHKRIFLFTNQDQP------TQDND 208
Query: 191 MTRT-TMQRAKDAQDLGISIELLPLSP--PDEEFKVSHFYADMIGLEGDDLALFMPSAGQ 247
+ +QRAKD DLGI IEL ++ D F S FY ++I L+ D + S+
Sbjct: 209 NQKVIAIQRAKDLSDLGIEIELFSMNNALSDHPFDFSLFYQEIIILQDDQIVDQDFSSAS 268
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLK 307
+ + +L+++ F KR + ++ I + I Y+L+ + T LD +N P+K
Sbjct: 269 RFSQLFSKLKRKQFKKRSLGQLPMYIGKDVVIGTQLYSLVSAATRSSPTMLDPASNLPIK 328
Query: 308 TERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPL-SYL 365
T IC +G L+ Y GE + F +E+ I+ + L L GFKP + L
Sbjct: 329 TLTKNICMSSGTTLLPSQIAYCMYYGGEPVVFEKREVDSIRSLDRVGLTLLGFKPSKAAL 388
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ 423
K + ++ S F+FP +K + GST AL +ML +R A+A + SN PR+VALV Q
Sbjct: 389 KRHRLVKHSNFLFPDEKSITGSTRALNALLDAMLSSDRVAIAKFLPRSNTSPRMVALVPQ 448
Query: 424 --DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRID 481
DE +R P G H+IYLPY+DDIR ++ S++ A+ +++ A ++K
Sbjct: 449 EEDEDLRM-----PRGFHIIYLPYADDIRAIQVEQSES----TATTNQIDCAKQVIKAYH 499
Query: 482 LKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLS 541
+ D++ F NP+LQ+HYA LQALALE D + D T P+++ + V++++ S
Sbjct: 500 I-DYNPADFLNPALQKHYANLQALALERDSVAPTTDNTKPNKDKQDENQDL--VKQWEDS 556
Query: 542 VYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYL-- 599
VY +Y V+ S+KR +NA A DW LA+ G + ++TV +L +L
Sbjct: 557 VYSSDY-----VQQLNQSKKRDRENKNA---LAKLDWEKLAENGGIVKLTVADLNEFLKN 608
Query: 600 MAHNLSTTGRKETLI 614
T +K L+
Sbjct: 609 QGQKTPTKAKKADLV 623
>gi|340380522|ref|XP_003388771.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 579
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 304/611 (49%), Gaps = 73/611 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAIC 83
+ ATK+ ++ L+D S MF +++T F + + C L ++I+ D V +
Sbjct: 29 YSATKDCLILLIDVSLGMFV----KDEETKGIPFELCIKCARSVLLNKVISSEKDLVGVV 84
Query: 84 FFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEE-----SFEKEIGSQYGI 138
FF T K+ N D V++ + LD P A IKE + + E +FEK+ G
Sbjct: 85 FFGTNKENNPSDFKHVYIL-----QDLDMPDAPRIKELETMLEDEGFQTFEKDYGH---- 135
Query: 139 VSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
S + SL + W +L +K++ +RILLFTN D P S + R +
Sbjct: 136 ---SNDFSLSDVFWTCSTMLSTSGAKSSHRRILLFTNNDHPHQSNPA-----LQRQAKTK 187
Query: 199 AKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRK 258
AKD + GI +EL+ + F V+ FY +++ + D F P +K E++ ++R
Sbjct: 188 AKDLAENGIEVELMHIG---SGFNVTSFYQEIVFSDDGDGTSF-PDPSEKFEELLTRVRS 243
Query: 259 RMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG 318
+ KR ++RI+F + L + + Y ++R T + LD TN LKT+ +C DTG
Sbjct: 244 KELKKRALQRITFSLGPDLELGVGVYCMVRETKKPSFIRLDKRTNEELKTQTKKLCEDTG 303
Query: 319 A-LMQEPAKRFQPY--KGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPST 375
+ L+ K +Q GE + F +E+ E+K L GF+P S +K +H ++P+
Sbjct: 304 SILLPTDIKYYQVLGAGGEKVIFEEEEIKELKNFGKPGFTLMGFRPKSKMKMHHYIKPAN 363
Query: 376 FVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQ-DEIVRAGGQ 432
F++P + V GST +F L R + AV Y N S P VALV Q +E+ + Q
Sbjct: 364 FIYPDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSPPIFVALVPQEEELDDSNIQ 423
Query: 433 VEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFAN 492
+ PPG H+I+LP+S+DIR ++ D +P+AS +++ KA ++K++ +F F N
Sbjct: 424 ISPPGFHVIFLPFSEDIRSLDL----PDEMPKASHEQIDKAKEIIKKLSF-NFQSESFEN 478
Query: 493 PSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEG 551
P +Q+HY VL+ALALE ++ EI D TVPD + R G KA++EF +V+ D +D E
Sbjct: 479 PVIQKHYRVLEALALEHEEEEEITDLTVPDAAQINKRAG--KAIDEFMKAVFPDGFDPEA 536
Query: 552 DVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
+ K KL ++T LK YL + GRK+
Sbjct: 537 KIT-----------------------------KRKLGKLTNPVLKEYLKSVGKKAAGRKQ 567
Query: 612 TLISRILTHMG 622
LI I H+G
Sbjct: 568 DLIDAINEHLG 578
>gi|330805479|ref|XP_003290709.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
gi|325079131|gb|EGC32746.1| hypothetical protein DICPUDRAFT_7342 [Dictyostelium purpureum]
Length = 528
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 271/528 (51%), Gaps = 55/528 (10%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTD--ETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
++ +V+L+DAS MF DQ D E F+ A+ C+ Q++ +II D + +CF+
Sbjct: 4 RDCIVFLIDASKSMF-------DQNDSGEVPFYNAIKCLIQTITDKIITSESDLIGVCFY 56
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
NT KKKN+ D ++V + +LD P + I + +E+ E + +G +G +
Sbjct: 57 NTDKKKNINDFENIYVLS-----ELDIPDPKIILQ---LEDILENDFSKSFGHFNG--DF 106
Query: 146 SLYNALWVAQGLLRKGSSKTAD-------KRILLFTNEDDPFGSIKGAAKNDMTRT-TMQ 197
L +ALW + +A KRI LFTN+D+P N+ R T+Q
Sbjct: 107 PLCDALWTCSTMFSNMKQTSAQSQQQNNFKRIFLFTNQDNP------NQYNEGNRNLTIQ 160
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPS---AGQKLEDMKD 254
RAKD +L I IEL ++ P E+F + FY +++ GDD P+ A K ++
Sbjct: 161 RAKDLSELNIQIELFSMNKPGEQFDFTLFYQNILVF-GDDDQYIDPNQFNASTKFSELLS 219
Query: 255 QLRKRMFSKRIVKRISFIIANG--------LSIELNTYALIRPTVPGAITWLDSVTNHPL 306
+L+++ F KR + +I I + + I Y L + LD TN P+
Sbjct: 220 KLKRKEFKKRSLGKIPLYIGSSSDNNNNNQIVISTQMYNLFSTARKSSPVLLDPKTNLPV 279
Query: 307 KTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365
K +C TGA L+ K+ Y GE + FS EL IK + L L GFKP S +
Sbjct: 280 KQLVKNVCEATGATLLPSQIKQSFYYGGEPVIFSKDELDSIKSIDRIGLTLLGFKPTSAI 339
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ 423
K YH+++ S+F+FP ++ + GST F +L ML+ ++ A+ + + S PR+VAL+ Q
Sbjct: 340 KAYHSIKHSSFIFPDEQMIKGSTVTFNSLVEQMLKSDKVAICRFTSRSGSAPRMVALLPQ 399
Query: 424 DEIV----RAGGQVE--PPGMHMIYLPYSDDIR-PVEELHSDTDAVPRASDDEVKKAAAL 476
+EI+ + G+++ P GMH+IYLPY+DDIR PV + D E + A
Sbjct: 400 EEILINEFDSFGKIQFRPRGMHIIYLPYADDIRHPVNVGIVKKNKSDEKKDQESIELAKK 459
Query: 477 MKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEE 524
+ + F ++ NPSLQ+HYA LQALALE D + E D PD++
Sbjct: 460 IIKSMKIKFDEKKYLNPSLQKHYASLQALALERDSIEETIDNIQPDQQ 507
>gi|213511578|ref|NP_001133439.1| ATP-dependent DNA helicase 2 subunit 1 [Salmo salar]
gi|209154002|gb|ACI33233.1| ATP-dependent DNA helicase 2 subunit 1 [Salmo salar]
Length = 609
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 199/624 (31%), Positives = 308/624 (49%), Gaps = 41/624 (6%)
Query: 12 DDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQ 71
D EE D ++ +V+LVDAS +MF ED+ + + F + + C+ ++
Sbjct: 15 DGEERDESGVDYKSTGRDSLVFLVDASKEMF---IKGEDE-EPSPFDMTMQCVRSVYTSK 70
Query: 72 IINRLYDEVAICFFNTRKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK 130
II+ D VA+ F+ T + KN ++ V++++ LD P AR +++ D
Sbjct: 71 IISSDKDLVALVFYGTEQSKNPRNSFKHVYIYH-----DLDSPGARRVQDVD----GLRG 121
Query: 131 EIGSQY-GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKN 189
E G+Q G GS +L ALW L + + KR+++FT D P G G ++
Sbjct: 122 EKGAQVAGETMGSGNTNLGEALWCCSNLYSDIKLRLSHKRLMIFTCRDTPHG---GDSER 178
Query: 190 DMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDD--LALFMPSAGQ 247
D R +A D ++ G+ I+L+ L P F VS F+ D++ D+ L L M G
Sbjct: 179 D--RQARTKASDLKETGVVIDLMHLMKPGG-FDVSLFFCDVVSPPEDEAELGLQMEPCG- 234
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTY-ALIRPTVPGAITWLDSVTNHPL 306
KLED+K ++R + KR V R++ + G+++ + Y ++ P AI L N P+
Sbjct: 235 KLEDLKKRVRAKEMKKRSVARLNLCLGEGMNVAVGVYITALQARKPNAIK-LYRDNNEPV 293
Query: 307 KTERSFICADTGALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365
+T+ TG+L+ KR Q Y G I E+ IK+ S L L GFKP+ L
Sbjct: 294 RTKTRLYHTQTGSLLLPSDTKRVQVYAGRQIVMEKDEVDVIKKFSDPGLELIGFKPMERL 353
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ 423
K +H+LR + F++P ++ V GS C+F AL R N FA+ Y N PR +ALV Q
Sbjct: 354 KLHHHLRSAVFIYPEEEMVTGSACVFTALLRRCSVRNVFALCKYTRIRNSPPRFLALVPQ 413
Query: 424 DEIVRAG-GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDL 482
E V G Q+ PG H I+LPY+DDIR + DT +P AS+ +V K ++ ++
Sbjct: 414 REEVDDGQAQIAAPGFHGIFLPYADDIRTL-----DTPQLPTASEPQVDKMKEIVHKLRF 468
Query: 483 KDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLS 541
K + F NP LQ+HY L+ALAL+ I+D T+P+ M R G + +EF+
Sbjct: 469 K-YRSDAFENPVLQQHYRNLEALALDLMAPEHIEDHTMPNVNMMDQRLGSL--AQEFRDL 525
Query: 542 VYGDNYDEEGDVKVSEASRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLM 600
VY +Y+ EG + E K E + + KG L ++TV LK
Sbjct: 526 VYPADYNPEGKTGPKRKPAEAAGGAEKKPKLEMSEDELRGHVQKGTLGKLTVPVLKDACK 585
Query: 601 AHNLSTTG-RKETLISRILTHMGK 623
+ TG +K+ LI + + K
Sbjct: 586 QFGVKVTGTKKQELIDALTAQLTK 609
>gi|194226894|ref|XP_001500404.2| PREDICTED: x-ray repair cross-complementing protein 6 [Equus
caballus]
Length = 606
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 192/606 (31%), Positives = 306/606 (50%), Gaps = 40/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D+ + T F +++ CI +II+ D +A+ F+
Sbjct: 32 SGRDSLIFLVDASKAMFES----QDEDELTPFDMSIQCIQSVYTNKIISSNQDLLAVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D + + + G ++ ++
Sbjct: 88 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDRL----KGQQGKKHFQDLLGHGS 138
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP S +AK RT +A D +
Sbjct: 139 DYSLSEVLWVCANLFSNVQFKMSHKRIMLFTNEDDPHSS--DSAKASRART---KAGDLR 193
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + + +KLED+ ++R +
Sbjct: 194 DTGIFLDLMHLKKPG-GFDISLFYRDIISVAEDEDLGVHFEES-RKLEDLLRKVRAKETK 251
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA-LM 321
KR++ R+ F + ++ + Y +++ L TN P+KT+ +TG+ L+
Sbjct: 252 KRVLCRLKFKLNKDIAFTVGIYNMVQKAHKPPPIKLYRETNEPVKTKTRTFSVNTGSLLL 311
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E +KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 312 PSDTKRSQTYGSRQIVLEKEETEALKRFDEPGLLLIGFKPLLMLKQHHYLRPSLFVYPEE 371
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +FIAL L AV Y N P VAL+ Q +E+ QV PPG
Sbjct: 372 SLVNGSSTLFIALLTKCLEKEVMAVCRYTPRKNIPPYFVALIPQEEELDDQKIQVTPPGF 431
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ ++V K A+++++ K + F NP LQ+H
Sbjct: 432 QLVFLPYADDKRKV----PLTEKV-MANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQH 485
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y + +V V
Sbjct: 486 FKNLEALALDLMEPEQAVDLTLPKVEAMDKRLGFL--VDEFKELVYPPDYSPKAEVPV-- 541
Query: 558 ASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
RK+ + + E + + KG L + TV LK + L +K+ L+ +
Sbjct: 542 --RKQDSGNKRPKVEVSEEELKAHISKGTLGKFTVPMLKEACREYGLKVGLKKQELLDTL 599
Query: 618 LTHMGK 623
H K
Sbjct: 600 TKHFQK 605
>gi|335775639|gb|AEH58639.1| ATP-dependent DNA helicase 2 subunit 1-like protein [Equus
caballus]
Length = 574
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 192/604 (31%), Positives = 305/604 (50%), Gaps = 40/604 (6%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +++LVDAS MF + +D+ + T F +++ CI +II+ D +A+ F+ T
Sbjct: 2 RDSLIFLVDASKAMFES----QDEDELTPFDMSIQCIQSVYTNKIISSNQDLLAVVFYGT 57
Query: 88 RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSREN 145
K KN + ++V ++LD P A+ + E D ++ + G ++ ++ +
Sbjct: 58 EKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQLK----GQQGKKHFQDLLGHGSDY 108
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL LWV L K + KRI+LFTNEDDP S +AK RT +A D +D
Sbjct: 109 SLSEVLWVCANLFSNVQFKMSHKRIMLFTNEDDPHSS--DSAKASRART---KAGDLRDT 163
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
GI ++L+ L P F +S FY D+I + E +DL + + +KLED+ ++R + KR
Sbjct: 164 GIFLDLMHLKKPGG-FDISLFYRDIISVAEDEDLGVHFEES-RKLEDLLRKVRAKETKKR 221
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QE 323
++ R+ F + ++ + Y +++ L TN P+KT+ +TG+L+
Sbjct: 222 VLCRLKFKLNKDIAFTVGIYNMVQKAHKPPPIKLYRETNEPVKTKTRTFSVNTGSLLLPS 281
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
KR Q Y I +E +KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 282 DTKRSQTYGSRQIVLEKEETEALKRFDEPGLLLIGFKPLLMLKQHHYLRPSLFVYPEESL 341
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHM 440
V GS+ +FIAL L AV Y N P VAL+ Q +E+ QV PPG +
Sbjct: 342 VNGSSTLFIALLTKCLEKEVMAVCRYTPRKNIPPYFVALIPQEEELDDQKIQVTPPGFQL 401
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
++LPY+DD R V T+ V A+ ++V K A+++++ K + F NP LQ+H+
Sbjct: 402 VFLPYADDKRKV----PLTEKV-VANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQHFK 455
Query: 501 VLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEAS 559
L+ALAL+ + + D T+P E M R G + V+EFK VY +Y + +V V
Sbjct: 456 NLEALALDLMEPEQAVDLTLPKVEAMDKRLGFL--VDEFKELVYPPDYSPKAEVPV---- 509
Query: 560 RKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
RK+ + + E + + KG L + TV LK + L +K+ L+ +
Sbjct: 510 RKQDSGNKRPKVEVSEEELKAHISKGTLGKFTVPMLKEACREYGLKVGLKKQELLDTLTK 569
Query: 620 HMGK 623
H K
Sbjct: 570 HFQK 573
>gi|348686659|gb|EGZ26474.1| hypothetical protein PHYSODRAFT_484094 [Phytophthora sojae]
Length = 608
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 314/629 (49%), Gaps = 61/629 (9%)
Query: 16 SDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD--ETHFHIAVSCIAQSLKTQII 73
+ E ++ E+ K+ ++ L+D MF T P D+ T FH V + + LK++++
Sbjct: 16 GEEEDWELAESGKDALIVLLDVRKVMF-TPYPHADEAKAPSTWFHAVVELVIKLLKSKVV 74
Query: 74 NRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
++++ FF T K+ L V+ E + L P+A+ IK+ + E ++
Sbjct: 75 ANDNSQLSVVFFGTNKRGEAGTLEQVY-----ELQPLGYPSAQRIKDLQAL---LEADVQ 126
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTAD-KRILLFTNEDDPFGSIKGAAKNDMT 192
++Y + S + S NALW + K D +RI +FTN+D P +G ++
Sbjct: 127 AEYESMENSDKLSFSNALWQCGISFSNANLKKKDSQRIWIFTNDDSP----QGPDGEEVG 182
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEE-FKVSHFY--------ADMIGLEGDDLALFMP 243
R Q ++ +L ++ L ++PP +E F +S FY AD ++ A + P
Sbjct: 183 RIQKQ-VQNHTELKRTLNLFYITPPGKESFDLSKFYGCSFKDFSADANEEVVENEASYQP 241
Query: 244 S-AGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI---RPTVPGAITWLD 299
+ L+D+ D ++ F KR + I G+SI + YAL+ R P A LD
Sbjct: 242 AFPVGSLDDLMDGSLRKRFRKRRLTAFPLHITKGVSIGVELYALVVVQRKNTPVA---LD 298
Query: 300 SVTNHPLKTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
+ TN PLKTE ++C DTGA L + K++ Y G+ + F+ ++ EIK L+L
Sbjct: 299 ASTNTPLKTETKWLCEDTGAYLTPDQIKKYIDYGGKRVYFTRDDVVEIKHYDAPGLQLIC 358
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA--FYGNPSNPR 416
FKPLS LK N+R FV+P D + GS+ F+A+ SM+R N+FA+A S PR
Sbjct: 359 FKPLSSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKNKFALARLIARKTSEPR 418
Query: 417 LVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAA 474
LVALV Q+E GQV+P G+++I+LPY DDIR PV+ +++ A
Sbjct: 419 LVALVPQEEENDEMGQVQPSGLNVIFLPYLDDIRDIPVDP-------------EKIDAAK 465
Query: 475 ALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEED--DMPEIKDETVPDEEGMARPGVV 532
L+ + L + F NP LQ+HYA +QALAL+E+ E KD T+PD EG +
Sbjct: 466 HLISTLKLTE--APSFENPELQKHYAAIQALALDEEVLQFDEAKDTTLPDAEGFGQDE-- 521
Query: 533 KAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTV 592
A+ F+ G+ D + K + A E KE +WA L +++ T+
Sbjct: 522 DAITAFREVCGGELIDASTNAKRKVTKAGKPEAGETFDKE----EWAALVASNAIQKKTI 577
Query: 593 QELKLYLMAHNLSTTGRKETLISRILTHM 621
+LK +L AH L+ GRK L+ + M
Sbjct: 578 PQLKAFLHAHGLAAVGRKADLVDAVKRFM 606
>gi|443723956|gb|ELU12174.1| hypothetical protein CAPTEDRAFT_158558 [Capitella teleta]
Length = 553
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/582 (29%), Positives = 296/582 (50%), Gaps = 40/582 (6%)
Query: 50 DQTDETH--FHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAER 107
++ DE H F + + C ++++II+ D +A+ F+ T K+KN D ++
Sbjct: 3 EKGDEEHSPFELCIKCAKSVIQSKIISSNKDLMAVIFYATTKEKNQGDFKNCYIV----- 57
Query: 108 EQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTAD 167
+ LD+P A + + ++ + YG S SL +ALW+ + + K
Sbjct: 58 QNLDQPGADQVLQLENFLTDDPDNFAADYG---HSNTFSLSDALWLCSSVFSNCTQKLGF 114
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE-FKVSHF 226
KRI+LFTN D P +N + + T+ + +D GISIEL+ ++ P E F F
Sbjct: 115 KRIMLFTNNDCPH-------ENQLKKQTIAKVEDLHHSGISIELMHMNKPGGEIFNYDAF 167
Query: 227 YADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
Y D++ ++ DD ++ + + E++ ++R + + KR + R+SF L + + Y L
Sbjct: 168 YKDVLIVD-DDESVHIADPAARFEELLSRVRIKEYKKRTLSRVSFSFGGALEMAVGVYNL 226
Query: 287 IRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSE 345
+R L TN +KT DT LM + K+ Q Y + I F +E+++
Sbjct: 227 VRTCTKPPAVKLYKKTNEEVKTVTQTFLRDTAEVLMPQDMKKMQTYATKQICFEPEEITQ 286
Query: 346 IKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFA 405
IK+ ++L GFKP S LK H++RP+ F++P + ++ GST +F AL + L+ + A
Sbjct: 287 IKKFDDPGVKLLGFKPKSSLKKMHHVRPAQFLYPDETQIKGSTTLFTALLKKCLQRDVVA 346
Query: 406 VAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAV 462
+ + N PR+VALV Q +E+ QV PPG H+I++PY+DD R ++ + V
Sbjct: 347 ICRFTARQNQPPRIVALVPQEEELDEHQVQVAPPGFHVIFMPYADDFRNLKF----EEGV 402
Query: 463 PRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
PRAS +++ KA +++K++ FS NPSLQ+HY ++A+AL+ D +I D PD
Sbjct: 403 PRASTEQIDKAKSIVKKLRFT-FSPEGMENPSLQQHYVNVEAMALDRDQPDDINDSASPD 461
Query: 523 EEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADL 581
+E + R G K + EF V+ + Y K A+R + TE + +
Sbjct: 462 DEMIDKRAG--KMISEFSEMVFPEGYVPGAKRKAPAAARVKPDLTE--------LNMEEE 511
Query: 582 ADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLISRILTHMG 622
A G+L ++TV LK ++ + + G +K L+ + H
Sbjct: 512 ARAGRLMKLTVPILKEFVKTNRIPCAGTKKADLVQAVTDHFA 553
>gi|328874182|gb|EGG22548.1| ATP-dependent DNA helicase [Dictyostelium fasciculatum]
Length = 825
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 181/614 (29%), Positives = 301/614 (49%), Gaps = 83/614 (13%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKT 70
D DE+SD Q + ++ +++L+D S MF P+ T E F A+ C+ Q++
Sbjct: 67 DGDEDSDQTSGQTEYSLRDCIIFLIDCSKSMFLPN-PS---TGEIPFKNAIKCLIQTITD 122
Query: 71 QIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK 130
+II D + +C F T K KNL D ++V + LD P + I + IE+
Sbjct: 123 KIITSESDLIGLCLFGTDKNKNLNDFENIYVMS-----DLDTPDPKLILQ---IEDILAG 174
Query: 131 EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
++GS G S +E + + LW + + K A KRI LFTNED+P ND
Sbjct: 175 DLGSFGG--SAKKEFAFGDVLWTCSTMFSNCNVKIAHKRIFLFTNEDNP------NQGND 226
Query: 191 MTRT-TMQRAKDAQDLGISIELLPLSP--PDEEFKVSHFYADMIGLEGDDLALFMPSAGQ 247
RT + QRAKD DLGI IEL ++ D+ F FY ++I + D + A
Sbjct: 227 NLRTISFQRAKDLSDLGIEIELFAMNKNEDDDTFDFGKFYQNIIFYQ-DGEYIDKIDASS 285
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLK 307
K E ++ +L+++ F KR + +I F I N + TVP A
Sbjct: 286 KFEALRARLKRKEFKKRSLGKIPFYIGNNPN-----------TVPIAC------------ 322
Query: 308 TERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKD 367
+ Y GE + FS +E+ +IK + + L GFKP + +K
Sbjct: 323 -------------------QIYYYGGEPVVFSKEEVEKIKSIDRQGMVLMGFKPANTIKR 363
Query: 368 YHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDE 425
++ +F+FP +K V GST AL M+ L+R A+ + + PR+VAL+AQ+E
Sbjct: 364 QQTIKHMSFLFPDEKTVKGSTVTLNALIDKMIELDRVAICKFLPRAGTLPRMVALIAQEE 423
Query: 426 IV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK 483
I+ + Q++ G ++ YLPY+DDIR + + +A++ ++ A ++K +
Sbjct: 424 IINPKDSTQIQSRGFNVFYLPYADDIRQFQ-----FNTTTKANEKQIDAAKKIIKTFKI- 477
Query: 484 DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVY 543
+++ F NP LQ+HY LQA+ALE D + ++KD +P+E+ ++ V +++++ V+
Sbjct: 478 NYNDQSFLNPGLQKHYNSLQAIALERDKVEDVKDTILPNEDNFSQN--VDVLKDYQKLVF 535
Query: 544 GDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHN 603
+Y +S A+ K++ + K +YDW +LA G + ++T+ EL +L
Sbjct: 536 SSDYKVSASSSLSSAASKKR---DREGKGIGDYDWVELAQSGGIAKLTIPELSEFLKNQG 592
Query: 604 LSTTG--RKETLIS 615
T +K L+S
Sbjct: 593 QKTPSKFKKADLVS 606
>gi|126343698|ref|XP_001378778.1| PREDICTED: x-ray repair cross-complementing protein 6 [Monodelphis
domestica]
Length = 613
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 303/614 (49%), Gaps = 50/614 (8%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF +D+ T F + + CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFE----PQDEGPRTSFELTIQCIQSVYSSKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + +V+V + +LD P A+ I E D F+ E G + ++
Sbjct: 89 GTDKAKNSVNFRSVYVLH-----ELDPPGAKRILELDR----FKGEQGERNFRELIGHGP 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL ALWV L K + KRI+LFTNED P + AK RT +A D +
Sbjct: 140 DYSLSEALWVCANLFSGVRLKMSHKRIMLFTNEDHPHAN--DGAKASRART---KASDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIG-LEGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F V+ FY D+I EG+++ + +G +LED+ ++R +
Sbjct: 195 DTGIFLDLMNLKKPGG-FDVALFYRDLITPAEGEEVGVHFEESG-RLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + +++ ++ + L++ L TN +KT+ R+F G L+
Sbjct: 253 KRALARLKLRLGKDVALMVSIFNLVQKACKPLPIRLYRETNEQVKTKTRTFSVQTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y G I E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQVYGGRPIVMEKAETEELKRFDEPGLVLIGFKPLFLLKQHHFLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGM 438
V GST +F AL L A+ Y N P VALV Q+E + A QV PPG
Sbjct: 373 SLVHGSTTLFSALLTKCLEKGVLALCRYTPHQNSPPCFVALVPQEEELDAQRVQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ ++V K A+++R+ K + F NP LQ+H
Sbjct: 433 QLVFLPYADDKRKVPATEKVT-----ANPEQVDKMKAIVQRLRFK-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + D T+P E M R G + VEEFK VY +YD +
Sbjct: 487 FRNLEALALDLTEPEHAPDLTLPKVEAMDLRLGSL--VEEFKELVYPPDYDPQ------R 538
Query: 558 ASRKRKAATENAAK-------ECANYDWADLADKGKLKEMTVQELKLYLMAHNLS-TTGR 609
+ KRK TE E + + A+KG L ++TV LK L ++ +
Sbjct: 539 KAVKRKQGTEGGGPGDKQPRLEVSQEELKAHAEKGTLGKLTVPVLKEACRVCGLKPSSTK 598
Query: 610 KETLISRILTHMGK 623
K+ L+ + H K
Sbjct: 599 KQELLGLLQEHFQK 612
>gi|417403277|gb|JAA48451.1| Putative dna-binding subunit of a dna-dependent protein kinase ku70
autoantigen [Desmodus rotundus]
Length = 609
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 306/612 (50%), Gaps = 48/612 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF +ED+ + T F I++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASKAMF---IKSEDEDESTPFDISIQCIQSVYTSKIISSDRDLLAVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI-----EESFEKEIGSQYGIVS 140
T K KN + ++V ++LD P A+ + E +E F+ IG
Sbjct: 88 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELAQFKGRQGQEHFQDRIGC------ 136
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
+ SL LWV L K + KRI+LFTNEDDP G+ AK RT +A
Sbjct: 137 -GCDYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHGN--DNAKASRART---KAG 190
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKR 259
D +D GI ++L+ L F S FY D+I + EG+DL + + KLED+ ++R +
Sbjct: 191 DLRDTGIFLDLMHLKKLGG-FDTSLFYRDIISVAEGEDLQVHFQESS-KLEDLLRRVRAK 248
Query: 260 MFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA 319
KR + R+ F ++ +++ ++ Y I+ V L TN P+KT+ +TG+
Sbjct: 249 ETKKRALIRLKFKLSKDIALSVSIYNTIQKAVKSPPIRLYRETNEPVKTKTRTFNVNTGS 308
Query: 320 LM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVF 378
L+ KR + Y G +I +E ++KR L L GFKPL LK +H +RP FV+
Sbjct: 309 LLLPSDTKRSRIYGGSHIVLEKEETEQLKRFDEPGLVLIGFKPLIMLKKHHYVRPGLFVY 368
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEP 435
P + V GS+ +F AL L AV Y + N P VAL+ Q +E+ QV P
Sbjct: 369 PEESLVNGSSTLFTALLTKCLEKEVMAVCRYTSRQNIPPYFVALMPQEEELDDQRIQVTP 428
Query: 436 PGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSL 495
PG H+I+LPY+DD R V T+ + A+ ++V K A+++++ K + F NP L
Sbjct: 429 PGFHLIFLPYADDKRKV----PFTEKI-MANPEQVDKMKAIVQKLRFK-YRSDSFENPVL 482
Query: 496 QRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVK 554
Q+H+ L+ALAL+ + + D T+P + M R G + V+EFK VY +Y E V
Sbjct: 483 QQHFRNLEALALDLTEPEQAVDVTLPKVKEMDQRLGSL--VDEFKELVYPPDYSPERKV- 539
Query: 555 VSEASRKRKAATENAAKECANYDWADL---ADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
+KR + + + +L KG L ++TV LK + L RK+
Sbjct: 540 ---PRQKRDDGGSGSKRPKLDLSEEELKVHVSKGTLGKLTVPMLKEACRVYGLKGGTRKQ 596
Query: 612 TLISRILTHMGK 623
L+ + H K
Sbjct: 597 ELLDALTKHFQK 608
>gi|320170254|gb|EFW47153.1| ATP-dependent DNA helicase II 70 kDa subunit [Capsaspora owczarzaki
ATCC 30864]
Length = 732
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 295/599 (49%), Gaps = 58/599 (9%)
Query: 27 TKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFN 86
K+ V++ +D S MF T DE F I+ C L +II+ +D + + FN
Sbjct: 150 NKDAVIFAIDCSDAMFETL-----DNDEVPFTISALCAKNVLSNKIISSDHDLIGVVLFN 204
Query: 87 TRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-----ESFEKEIGSQYGIVSG 141
T++ N V+V + LD P R I E + + + F ++IG
Sbjct: 205 TKENNNKNKFKHVYVL-----QPLDTPDVRRIVELEDLVADPAFDGFNRKIGH------- 252
Query: 142 SRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKD 201
S S+++ LW + ++K KRIL+FTNEDDP G + R + +AKD
Sbjct: 253 SSSASIHDVLWTCFNMFSDCATKVGSKRILIFTNEDDPHEHDAG-----LRRQAVIKAKD 307
Query: 202 AQDLGISIELLPLSP--PDEEFKVSHFYADMIGLEGDD--------LALFMPSAGQKLED 251
L ++IELLPL E F +S FY D++ + DD L P Q L
Sbjct: 308 LYQLFVTIELLPLGTKKTGERFDMSKFYKDIVLEDLDDELGPTDAGLDTARPDPSQSLSS 367
Query: 252 MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS 311
+ D++R++ F KR + +I F++ + + + + Y L T G+ WL + TN +KT
Sbjct: 368 LMDKMRRKTFKKRALMKIPFVLGDDVQLGVRVYNLCSETKKGSHVWLHAQTNKEIKTVSK 427
Query: 312 FICADTGAL-MQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHN 370
+C DT +L M K + PY GE + F E+ EI+R L L GFKP +K ++N
Sbjct: 428 MVCQDTASLLMASDIKNYFPYGGEKVIFDPTEVREIRRFGQPGLVLMGFKPTDAVKLHYN 487
Query: 371 LRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVR 428
++ + F++P + V+GST +F AL + ++ A+ + N PR VALV Q E+
Sbjct: 488 VKTANFIYPDETVVMGSTLLFHALLMRLADQDKVAICRFIPRINATPRFVALVPQLEVFD 547
Query: 429 AGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSV 487
A Q++PPG H+IYLP++DD+R ++ ++ + A+ ++K++ FS
Sbjct: 548 ANHVQLQPPGFHVIYLPFADDLRSLQYEENEM-----CGKSLIVTASDIIKKLTFS-FSP 601
Query: 488 CQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR-PGVVKAVEEFKLSVYGDN 546
F NP+LQ+HY L+ALAL D + +D PD +GM + GV+ A +F+ + +
Sbjct: 602 WDFENPNLQKHYRNLEALALGRDVADDFEDNVQPDLDGMEKQAGVLFA--KFRDEAFPPD 659
Query: 547 YDEEGDVKVSEASRKRKAATENAAKECANYDWADLAD------KGKLKEMTVQELKLYL 599
Y+ D ++ KR+A + + + + D G L+ +T+ LK YL
Sbjct: 660 YNP--DTAGTKPRPKRRAEGDPPPVKRVRLEDGEKPDVEKFYKDGMLESLTIPMLKEYL 716
>gi|298104100|ref|NP_001177114.1| X-ray repair cross-complementing protein 6 [Sus scrofa]
Length = 607
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 307/608 (50%), Gaps = 45/608 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D+ + T F +++ CI +II+ D +A+ F
Sbjct: 31 SGRDSLIFLVDASRAMFES----QDEDELTPFDMSIQCIQSVYTNKIISSDRDLLAVVFC 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T+K KN + ++V ++LD P A+ ++E D F+ + G++Y ++
Sbjct: 87 GTKKDKNSVNFKNIYVL-----QELDSPGAKRVQELDR----FKGQEGTKYFQDLLGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTN+DDP G+ +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNDDDPHGN--DSAKASRART---KAGDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +D+ + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKPGG-FDISLFYRDIISVAEDEDIGVHFEES-HKLEDLLRKVRAKETR 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ ++ +++ + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLHRLKLKLSKDVALTVGIYNLVQKAYKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y + +E +KR L L GFKPL LK +H +RPS FV+P +
Sbjct: 311 PSDTKRSQTYGNRQVVLEKEETEMLKRFDEPGLILIGFKPLGMLKRHHYVRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y N P VAL+ Q +E+ QV PPG
Sbjct: 371 SLVNGSSTLFTALLTKCLEKEVMAVCRYTPRKNLPPYFVALMPQEEELDDQKVQVTPPGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ + A+ ++V K A+++++ K + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKV----PFTEKI-MANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ ++ LAL+ + + D T+P E MA+ + V+EFK VY +Y+ EG
Sbjct: 485 FRNMETLALDLMEPEQAVDLTLPKAEAMAK-RLGSLVDEFKELVYPPDYNPEG------K 537
Query: 559 SRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+ KRK E+ E + + +G L ++TV LK H + +K+ L
Sbjct: 538 APKRKQDNESCGSKRPKVELSEEELKAHISEGTLGKLTVPTLKEACRVHGVKGGMKKQEL 597
Query: 614 ISRILTHM 621
+ + H
Sbjct: 598 LDALTKHF 605
>gi|67968771|dbj|BAE00743.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 305/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPGV-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGVYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQIYGSRQIILEKGETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGM 438
V+GS+ +F AL L A+ Y N P VALV QD E+ QV PPG
Sbjct: 373 SLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQDEELDDLKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H
Sbjct: 433 QLVFLPFADDKRKM----PFTEKI-MATPEQVDKMKAIVEKLRFT-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 487 FRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKV---- 540
Query: 558 ASRKRKAATENAAKECANYDWADLA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
RK + + Y +L KG L + TV LK A+ L + +K+ L+
Sbjct: 541 TKRKHDNDGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|403345721|gb|EJY72241.1| Ku P70 DNA helicase [Oxytricha trifallax]
Length = 817
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 278/556 (50%), Gaps = 45/556 (8%)
Query: 17 DNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRL 76
D + ++ + ++ VV+L+D M P D ++ + +KT+II
Sbjct: 30 DQKEVEDMKQNRDSVVFLIDCHRSMHEKN-PHNGDGDPSNVQQILDACLSFMKTKIITSD 88
Query: 77 YDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY 136
D++ I + ++ N + N ++VF ++LD P A+ IK+ + + F K QY
Sbjct: 89 NDKIGIVLYGCKQTNNQLNFNNIYVF-----QKLDSPDAQSIKQLETKMQDFTK----QY 139
Query: 137 GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFG-SIKGAAKNDMTRTT 195
G V L+ ALW+ + ++ +KRI LFTNED+P + KG A+
Sbjct: 140 GFVPKETHTPLFEALWICHQEFKVVEKQSYNKRIFLFTNEDNPGNDNDKGMAQ------- 192
Query: 196 MQRAKDAQDLGISIELLPLSPPDEE---FKVSHFYADMIGLEGDDL---ALFMPSAGQKL 249
QRA D LG+ IEL P+ ++ F V FYA++I + ++ L + ++
Sbjct: 193 -QRANDLSSLGVDIELFPMPKAQQQRPVFDVKKFYANIIQFDEEEQFSEMLGIQGTQSRI 251
Query: 250 EDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE 309
++ ++R + F KR + F + I L+ Y + PT +++V N L++
Sbjct: 252 SELMKRIRMKEFRKRTQGKCLFSLTPKAQIALSFYTTVMPTKKPTAAKVNAVNNKQLRST 311
Query: 310 RSFICADTGALM--QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKD 367
+ FIC DTG+++ + A + P GE + + ++ +IK ++L GFKP S LK
Sbjct: 312 QRFICQDTGSVLYKNQIANHY-PVGGEKVNITQDDVKQIKFFDNVGMKLMGFKPRSALKV 370
Query: 368 YHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNP--RLVALVAQDE 425
+HN++ S F++P +K + GS+ + AL M+ ++ A+ + N R ALV Q E
Sbjct: 371 FHNIKHSYFIYPDEKRITGSSQVMDALINEMISDDKIAIVRFIPRDNSVVRFCALVPQKE 430
Query: 426 IV-RAGGQVEPPGMHMIYLPYSDDIRPV----------EELHSDTDAVPRASDDEVKKAA 474
V G PPG +I+LPY+DDIR + EE+ + +++E K AA
Sbjct: 431 KVDDEDGFQTPPGFQLIFLPYADDIRDINAIFDAAGYGEEIKEEESIFDNLTNEE-KHAA 489
Query: 475 ALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKA 534
LM + DF+ F NPSLQ+ YA LQALAL ED +++D PD EGM R V
Sbjct: 490 KLMVKNMYIDFNSRNFDNPSLQQFYAGLQALALNEDKPEQVEDHLQPDYEGMQRFDPV-- 547
Query: 535 VEEFKLSVYGDNYDEE 550
+++FK ++ D DE+
Sbjct: 548 IQKFK-DIFFDGEDED 562
>gi|224095047|ref|XP_002197201.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Taeniopygia guttata]
Length = 611
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 305/615 (49%), Gaps = 56/615 (9%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + D ET F + + CI ++II+ D +++ F+
Sbjct: 35 SGRDSLIFLVDASKAMFES-----DGEAETPFDMTIQCIRTVYTSKIISSDRDLLSVVFY 89
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEES-----FEKEIGSQYGIVS 140
T KN D ++V ++LD P A+ + E D F + G
Sbjct: 90 GTENNKNSADFKHIYVL-----QELDNPGAKRVLELDQYRGDEGRALFRENFGH------ 138
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
S + SL ALW L + + KRI+LFTNEDDP + +AK + RT RA
Sbjct: 139 -SADYSLGEALWACSNLFSDVRVRLSHKRIMLFTNEDDPHAN--DSAKAKLART---RAG 192
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRM 260
D +D GI ++L+ L P F +S FY D+I + D+ P +KLE + ++R +
Sbjct: 193 DLRDTGIILDLMHLKKPGG-FDISLFYRDIINVAEDEDLGIHPKESEKLEHLMKKVRAKE 251
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL 320
KR + R++ + + + + Y LI+ L TN P+K + TG+L
Sbjct: 252 TRKRALVRLNLHLGKDVVLSVGVYNLIQKAYKPLPVKLYRETNEPVKIKTRMFSGKTGSL 311
Query: 321 M-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
+ KR Q Y I +E E+K+ + L L GFKPLS LK +H++R S F++P
Sbjct: 312 LLPSDTKRAQTYGNRQIVLEKEETEELKQFDSPGLFLIGFKPLSMLKQHHHIRCSQFIYP 371
Query: 380 SDKEVVGSTCIFIA-----LHRSMLRLNRFAVAFYGNPSNPRLVALVAQ-DEIVRAGGQV 433
+ V GST +F A L R+M+ L R+ PR VALV Q +E+ Q+
Sbjct: 372 EESLVRGSTTLFNALLIRCLERAMMMLCRYTPR---RNVPPRFVALVPQEEELDEQKVQM 428
Query: 434 EPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANP 493
PPG H+I+LPY+DD R V+ T+ VP AS ++V K +++++ K + F NP
Sbjct: 429 APPGFHLIFLPYADDKRNVDF----TENVP-ASQEQVDKMKEIIQKLRFK-YRADSFENP 482
Query: 494 SLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA-RPGVVKAVEEFKLSVYGDNYDEEGD 552
LQ+H+ L+ALAL+ + + +D T+P E M+ R G V+EFK VY +Y+ EG
Sbjct: 483 VLQQHFRNLEALALDMMEPEQAEDLTMPKSEQMSHRLG--NLVDEFKQLVYPPDYNPEG- 539
Query: 553 VKVSEASRKRKAATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG 608
+A ++++A+ + K E + + KG L ++TV LK L
Sbjct: 540 ----KAVKRKQASDDQTEKRPKVEVSKDELRSHVQKGTLGKLTVSVLKDACRFLRLRCGS 595
Query: 609 RKETLISRILTHMGK 623
+K+ L+ + + K
Sbjct: 596 KKQELVDALTEYFNK 610
>gi|344296330|ref|XP_003419862.1| PREDICTED: X-ray repair cross-complementing protein 6 [Loxodonta
africana]
Length = 612
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 302/607 (49%), Gaps = 40/607 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF D+ + T F +++ CI +II+ D +A+ F+
Sbjct: 32 SGRDSLIFLVDASKAMFEIQGEG-DEDELTPFDMSIQCILSVYTNKIISSDRDLLAVVFY 90
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ + G ++ ++
Sbjct: 91 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGQQGRKHFQDLIGHGS 141
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL ALWV L K + KR++LFTNEDDP G+ +AK RT +A D +
Sbjct: 142 DYSLNEALWVCANLFSDVQFKLSHKRVMLFTNEDDPHGN--DSAKASRART---KAADLR 196
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
D GI ++L+ L F +S FY D+I L D+ KLED+ ++R + K
Sbjct: 197 DTGIFLDLMHLKK-HGGFDISLFYRDIISLAEDEDTGVHFEESSKLEDLLRKIRAKENRK 255
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R+ F ++ +++ + Y L++ + L TN P+KT+ R+F + L+
Sbjct: 256 RTLGRLKFKLSKDIALTVGIYNLVQKAFRPSPIRLYRETNEPVKTKTRTFNVNNGSLLLP 315
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E ++KR L L GFKPL LK +H L+PS FV+P +
Sbjct: 316 SDTKRSQSYGSRQIVLEKEETEQLKRFDEPGLTLIGFKPLIMLKKHHYLKPSLFVYPEES 375
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQD-EIVRAGGQVEPPGMH 439
V GST +F AL L AV Y + S P V LV QD E+ QV PPG
Sbjct: 376 LVNGSTALFSALLTKCLEKEVMAVCRYIPRHNSPPYFVMLVPQDEELDDQKIQVTPPGFQ 435
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+++LPY+DD R V T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 436 LMFLPYADDKRKV----PFTEKI-LANPEQVDKMKAIVQKLRF-SYRSDSFENPVLQQHF 489
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV----K 554
L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ +G +
Sbjct: 490 RNLEALALDLMEPEQAVDLTLPKVEAMDKRLGSL--VDEFKELVYPPDYNPQGKTIRRKQ 547
Query: 555 VSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
E SR ++ E + +E + KG L ++TV LK L +K+ L+
Sbjct: 548 DDEGSRNKRPKVEVSEEELKAH-----ITKGTLGKLTVPVLKEACRMCGLQGGVKKQELL 602
Query: 615 SRILTHM 621
+ H
Sbjct: 603 DALTRHF 609
>gi|291410310|ref|XP_002721433.1| PREDICTED: ATP-dependent DNA helicase II, 70 kDa subunit
[Oryctolagus cuniculus]
Length = 608
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 308/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 32 SGRDSLIFLVDASRAMFESQ--SEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T+K KN + ++V + LD P A+ + E D F+ + G ++ ++
Sbjct: 88 GTKKDKNSVNFKNIYVL-----QDLDNPGAKRMLELDR----FKGQEGKEHFQDLIGHGS 138
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G +AK RT +A D +
Sbjct: 139 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGD--DSAKASRART---KASDLR 193
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I + E ++L ++ + KLED+ ++R +
Sbjct: 194 DTGIYLDLMHLKKRGG-FDISLFYRDIISIAEDEELGVYFEESS-KLEDLLRKVRAKETR 251
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + Y +++ L TN P+KT+ +TG+L+
Sbjct: 252 KRVLSRLKFKLNKDVVFSVGIYNMVQKATKPMPVRLYRETNEPVKTKTRTFNVNTGSLLL 311
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 312 PSDTKRSQIYGSRQIVLEKEETEELKRFDEPGLILIGFKPLVLLKKHHFLRPSLFVYPEE 371
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGM 438
V GS+ +F AL L AV Y N P VALV Q+E V Q+ PPG
Sbjct: 372 SMVNGSSTLFSALLTKCLEKEVLAVCRYTPRKNVPPYFVALVPQEEEVDDQKIQLTPPGF 431
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V TD V A+ ++V K A+++++ + + F NP LQ+H
Sbjct: 432 QLVFLPYADDKRKV----PFTDRV-LANPEQVDKMKAIVQKLRFR-YRSDSFENPVLQQH 485
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDV----K 554
+ L+ALAL+ + + D T+P E M++ + V+EFK VY +Y+ EG +
Sbjct: 486 FRNLEALALDLMEPEQAPDLTLPKVEAMSK-RLGSLVDEFKELVYPPDYNPEGKATGRKQ 544
Query: 555 VSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
E SR ++ E + +E + KG L ++TV LK AH L +K+ L+
Sbjct: 545 DDEGSRSKRPRVELSDEELKAH-----VSKGTLGKLTVPVLKEACRAHGLKGGLKKQELL 599
Query: 615 SRILTHM 621
+ H
Sbjct: 600 DALTRHF 606
>gi|327272550|ref|XP_003221047.1| PREDICTED: x-ray repair cross-complementing protein 5-like [Anolis
carolinensis]
Length = 614
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 189/609 (31%), Positives = 307/609 (50%), Gaps = 38/609 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D D T F + + CI +II+ D V + F+
Sbjct: 32 SGRDTLLFLVDASKAMFDSFD-HDDDDDLTPFDMTIQCIQNVYTNKIISHDRDLVGVVFY 90
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
T + KN D ++V + LD P A+ + E + K + S+ S
Sbjct: 91 GTEQYKNSVDFKHIYVL-----QDLDNPGAKRVLELGKYKGEQGKALFSKS--FGHSTNY 143
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL ALWV L K + KRI+LFTNED+P G + ++K RT +A D +D
Sbjct: 144 SLGEALWVCSNLFSDVRLKMSHKRIMLFTNEDNPHG--QDSSKAKFART---KATDLRDT 198
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
GI ++L+ L P F +S FY D+I E +DL + + KL D+ ++R + KR
Sbjct: 199 GIYLDLMHLRKPGG-FDISLFYRDIINTAEDEDLGVHFDESS-KLADLMKKVRSKETRKR 256
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QE 323
+ R++ + +++ + + L++ L TN P+KT+ +TG+L+
Sbjct: 257 ALGRLNLYLGKDVALSVGIFNLVQRAFKQPPVKLYRETNEPVKTKTRTFNKETGSLLLPS 316
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
KR Q Y I +E+ E KR + L L GFKPL LK +H ++P+ F++P +
Sbjct: 317 DTKRAQIYGNRQIVLEKEEVEETKRFDSPGLYLVGFKPLLMLKQHHYIKPAQFIYPDESL 376
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHM 440
+ GST +F AL L A+ Y N PR +ALV Q +E+ Q+ PPG H+
Sbjct: 377 ISGSTALFRALLTKCLEKGVMAICRYTARRNIPPRFIALVPQEEELDEQNVQISPPGFHL 436
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
I+LPY+DD R ++ T+ VP A+ ++V K +++++ K + F NP LQ+HY
Sbjct: 437 IFLPYADDKRKIDF----TEKVP-ANQEQVNKMKEIVQKLRFK-YRSESFENPVLQQHYM 490
Query: 501 VLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASR 560
L+ALAL+ + + +D T+P E M + VEEFK VY YD + S+A++
Sbjct: 491 NLEALALDLMEPEKAEDLTMPKVEVMD-SRLDNLVEEFKQLVYPPGYDPD-----SKATK 544
Query: 561 KRKA--ATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
+++A TE K E + + + KG L ++TV LK + L+ +K+ L+
Sbjct: 545 RKQAGDGTEKPEKKAKIEISEEELRNHIKKGTLGKLTVPVLKEVCRIYKLTGGTKKQELL 604
Query: 615 SRILTHMGK 623
+ + K
Sbjct: 605 DVVTNYFSK 613
>gi|281340934|gb|EFB16518.1| hypothetical protein PANDA_019481 [Ailuropoda melanoleuca]
Length = 582
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 187/608 (30%), Positives = 302/608 (49%), Gaps = 45/608 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVD S MF + + + + T F +++ CI +II+ D +A+ F+
Sbjct: 6 SGRDSLIFLVDGSRAMFES----QGEVELTPFDMSIQCIQSVYTNKIISSDQDLLAVVFY 61
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ E G ++ ++
Sbjct: 62 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGEQGKKHFQDLIGHGS 112
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KR++LFTNEDDP G +AK RT +A D +
Sbjct: 113 DYSLSEVLWVCANLFSDVRVKMSHKRVMLFTNEDDPHGD--DSAKASRART---KAGDLR 167
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I E +DL + + KLED+ ++R +
Sbjct: 168 DTGIFLDLMHLRKRGG-FDISLFYRDIISTAEDEDLGVHFEESS-KLEDLLRKVRAKETR 225
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR+++R+ F ++ +++ + Y +++ L TN P+K++ +TG+L+
Sbjct: 226 KRVLQRLKFKLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRTFNVNTGSLLL 285
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 286 PSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYLRPSLFVYPEE 345
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y N P VAL+ Q +E+ Q+ PPG
Sbjct: 346 SLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALLPQEEELDDQKIQLTPPGF 405
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A+++++ ++ F NP LQ+H
Sbjct: 406 QLVFLPYADDKRRV----PFTEKV-LANPEQIDKMKAIVQKLRF-NYRSDSFENPVLQQH 459
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + + D T+P E + R + V EFK VY +Y+ EG V
Sbjct: 460 FRNLEALALDLMEPEQAVDLTLPKIEAIDR-RLGSLVNEFKELVYPPDYNPEGKVP---- 514
Query: 559 SRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
KRK E + E + D KG L ++TV LK + L +K+ L
Sbjct: 515 --KRKQGDEGSGSKRPKMELSAEDLRAHVSKGTLGKLTVPMLKEACRVYGLRGGLKKQEL 572
Query: 614 ISRILTHM 621
+ + H
Sbjct: 573 LDVLTKHF 580
>gi|444723800|gb|ELW64430.1| X-ray repair cross-complementing protein 6 [Tupaia chinensis]
Length = 609
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 308/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF +D+ + + F +++ CI ++I+ D +A+ F+
Sbjct: 32 SGRDSLIFLVDASSAMFE----YQDEEELSPFDMSIQCIQSVYTNKLISSDRDLLAVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ + E D + + +K Q G GS +
Sbjct: 88 GTEKDKNSVNFKNIYVL-----QELDSPGAKRVLELDQFKGQQGKKRFQDQMG--HGS-D 139
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
S LWV L K + KRI+LFTNEDDP + +AK RT +A D +D
Sbjct: 140 YSFSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHRN--DSAKASRART---KASDLRD 194
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
GI +EL+ L P F +S FY D+I + E +DL + + KLED+ ++R + K
Sbjct: 195 TGIFLELMHLKKPGG-FDISLFYRDIISVAEDEDLGVHL-EVSSKLEDLMRKVRAKETKK 252
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-Q 322
R + R+ F ++ +++ + Y L++ + L TN P+K + +TG+L+
Sbjct: 253 RPLYRLKFKLSKDIALTVGIYNLLQKAFKSSAIRLYRETNEPVKVKTRIFSINTGSLLLP 312
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 SDTKRSQIYGNRQILLEKEETEELKRFDEPGLILIGFKPLVMLKKHHYLRPSMFVYPEET 372
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMH 439
V GS+ +F AL L AV Y N P VALV Q +E+ QV PPG
Sbjct: 373 LVNGSSTLFSALLSKCLEKEVVAVCRYTPRKNTPPYFVALVPQEEELDDQKIQVTPPGFQ 432
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+ YLPY+DD R V T+ V +A+ ++V K A+++++ K + F NP+LQ+H+
Sbjct: 433 LFYLPYADDKRKV----PITEKV-KANPEQVDKMKAIIQKLRFK-YRSDDFENPALQQHF 486
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV----K 554
L+ALAL+ + ++ D T+P E M R G + V+EFK VY +Y + +V +
Sbjct: 487 RNLEALALDLMEPEQVVDLTLPKVEEMDKRLGSL--VDEFKELVYPPDYTPDRNVTKRKQ 544
Query: 555 VSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
E S ++ E + +E + KG L ++TV LK + L + +K+ L+
Sbjct: 545 DDEGSGSKRPKVEFSEEELKAH-----VSKGTLGKLTVPVLKEACRVYGLKSGMKKQELM 599
Query: 615 SRILTHM 621
+ H
Sbjct: 600 DALTQHF 606
>gi|301787821|ref|XP_002929325.1| PREDICTED: x-ray repair cross-complementing protein 6-like
[Ailuropoda melanoleuca]
Length = 607
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 187/608 (30%), Positives = 302/608 (49%), Gaps = 45/608 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVD S MF + + + + T F +++ CI +II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDGSRAMFES----QGEVELTPFDMSIQCIQSVYTNKIISSDQDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ E G ++ ++
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGEQGKKHFQDLIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KR++LFTNEDDP G +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVRVKMSHKRVMLFTNEDDPHGD--DSAKASRART---KAGDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLRKRGG-FDISLFYRDIISTAEDEDLGVHFEESS-KLEDLLRKVRAKETR 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR+++R+ F ++ +++ + Y +++ L TN P+K++ +TG+L+
Sbjct: 251 KRVLQRLKFKLSKDIALTVGMYNMVQKAFKPPPVRLYRETNEPVKSKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 311 PSDTKRSQNYGNRQIVLEREETEELKRFDEPGLILIGFKPLIMLKKHHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y N P VAL+ Q +E+ Q+ PPG
Sbjct: 371 SLVNGSSTLFSALLTKCLEKEVMAVCRYTPRQNIPPYFVALLPQEEELDDQKIQLTPPGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A+++++ ++ F NP LQ+H
Sbjct: 431 QLVFLPYADDKRRV----PFTEKV-LANPEQIDKMKAIVQKLRF-NYRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + + D T+P E + R + V EFK VY +Y+ EG V
Sbjct: 485 FRNLEALALDLMEPEQAVDLTLPKIEAIDR-RLGSLVNEFKELVYPPDYNPEGKVP---- 539
Query: 559 SRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
KRK E + E + D KG L ++TV LK + L +K+ L
Sbjct: 540 --KRKQGDEGSGSKRPKMELSAEDLRAHVSKGTLGKLTVPMLKEACRVYGLRGGLKKQEL 597
Query: 614 ISRILTHM 621
+ + H
Sbjct: 598 LDVLTKHF 605
>gi|395540722|ref|XP_003772300.1| PREDICTED: X-ray repair cross-complementing protein 6 [Sarcophilus
harrisii]
Length = 610
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 307/618 (49%), Gaps = 60/618 (9%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF AED T F + + CI ++II+ D +A+ F+
Sbjct: 32 SGRDSLIFLVDASKAMFELQ--AED--GRTSFDLTIQCIQSVYSSKIISSDRDLLAVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI-----EESFEKEIGSQYGIVS 140
T K KN + ++V + +LD P A+ I D E+ F++ IG
Sbjct: 88 GTDKDKNSVNFRNIYVLH-----ELDIPGAKRILALDQFKGKQGEKHFQELIGC------ 136
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
GS + SL ALWV L K + KR++LFTN D P G +D T+ + + K
Sbjct: 137 GS-DYSLAEALWVCANLFSGVRLKMSHKRVMLFTNNDSPHG-------DDSTKASRAKTK 188
Query: 201 --DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALFMPSAGQKLEDMKDQLR 257
D +D GI ++L+ L P F +S FY D+I D DL + +G +LED+ ++R
Sbjct: 189 ACDLRDTGIFLDLMNLKKPGG-FDISLFYRDIITPGKDEDLGVHFEESG-RLEDLLRKVR 246
Query: 258 KRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADT 317
+ KR + R+ + +++ ++ Y +++ L TN +K + +T
Sbjct: 247 AKETRKRSLARLKLRLGKDVALTISIYNMVQKAFRPPPIRLYRETNEQVKIKTRTFNVET 306
Query: 318 GALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTF 376
G+L+ KR Q Y G I +E E+KR L L GFKPL LK +H LRPS F
Sbjct: 307 GSLLLPSDTKRAQTYGGRQIVMEKEETEELKRFDEPGLILIGFKPLFMLKQHHFLRPSLF 366
Query: 377 VFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDE---IVRAGG 431
V+P + V GST +F+AL L A+ Y N P VAL+ Q+E + R
Sbjct: 367 VYPEESLVNGSTTLFVALLTKCLEKGVLALCRYTPRQNSPPYFVALIPQEEELDVQRV-- 424
Query: 432 QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFA 491
QV PPG +++LPY+DD R V T A+ ++V K A+++++ K + F
Sbjct: 425 QVTPPGFQLVFLPYADDKRKVPFTEKVT-----ANPEQVDKMKAIIQKLRFK-YRSDSFE 478
Query: 492 NPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEE 550
NP LQ+H+ L+ALAL++ + + D T+P E M R G + VEEFK VY +Y+ E
Sbjct: 479 NPVLQQHFRNLEALALDQLEPEQAPDLTLPKVEAMDLRLGSL--VEEFKELVYPPDYNPE 536
Query: 551 GDVKVSEASRKRKAATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLST 606
+A+++++ + A K E + + +KG L ++TV LK L T
Sbjct: 537 -----KKATKRKQDGSGPAEKQPKLELSEEELKAYFEKGTLGKLTVPMLKEACRVCQLKT 591
Query: 607 TG-RKETLISRILTHMGK 623
G +K+ L+ + H K
Sbjct: 592 NGTKKQELLDLLTQHFQK 609
>gi|348569298|ref|XP_003470435.1| PREDICTED: X-ray repair cross-complementing protein 6-like [Cavia
porcellus]
Length = 609
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 306/610 (50%), Gaps = 45/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + + + + T F +++ CI ++II+ D + + F+
Sbjct: 32 SGRDSLIFLVDASRAMFVS----QGENELTPFDMSIQCIESVYTSKIISSDRDLLGVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T+K KN + ++V ++LD P A+ + E D F+ + G + ++
Sbjct: 88 GTKKDKNSVNFKNIYVL-----QELDNPGAKRVLELDR----FKGQPGQDHFQDLIGHGS 138
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTN DDP G +AK RT +A D +
Sbjct: 139 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNNDDPHGD--DSAKASRART---KASDLR 193
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI I+L+ L F +S FY D+I + E DL + + KLED+ ++R +
Sbjct: 194 DTGIFIDLMHLKKCGG-FDISLFYRDIISVAEDSDLGVHFEESS-KLEDLLRKVRAKENR 251
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + ++ + Y L++ L TN P+KT+ +TG+L+
Sbjct: 252 KRVLSRLKFKLDKDTALTVGIYNLVQKANKPPPVRLYRETNEPVKTKTRTFSVNTGSLLL 311
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E ++KR L L GFKPL+ LK +H +RPS FV+P +
Sbjct: 312 PSDTKRSQMYGNRKIVLEKEETEQLKRFDEPGLILIGFKPLALLKKHHYVRPSLFVYPEE 371
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y + P VALV Q +E+ QV PPG
Sbjct: 372 SLVNGSSTLFSALLIKCLEKEVIAVCRYTPRKSVPPYFVALVPQEEELDDQKIQVTPPGF 431
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A+++++ K + F NP LQ+H
Sbjct: 432 QLVFLPYADDKRNV----PITEKV-VANSEQIDKMKAIVQKLRFK-YRSDSFENPVLQQH 485
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + VEEFK VY +Y EG +
Sbjct: 486 FRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VEEFKDLVYPPDYSPEG-----K 538
Query: 558 ASRKRKAATENAAK----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
A+++++ + +K E + + A KG L ++TV LK L +K+ L
Sbjct: 539 ATKRKQDGEGSGSKRPKVELSKEELKAHATKGTLGKLTVPMLKEACRVCGLKGGLKKQEL 598
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 599 LDMLTQHFLK 608
>gi|54020912|ref|NP_001005700.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus (Silurana) tropicalis]
gi|49523218|gb|AAH75271.1| thyroid autoantigen 70kDa (Ku antigen) [Xenopus (Silurana)
tropicalis]
Length = 611
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 183/600 (30%), Positives = 297/600 (49%), Gaps = 34/600 (5%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDE-THFHIAVSCIAQSLKTQIINRLYDEVAICF 84
A ++ +++L+DAS MF +T DE T F + + CI ++II+ +D +++ F
Sbjct: 32 AGRDSLIFLIDASKPMFEST------GDELTPFDLTLQCIRSVYASKIISSDHDLLSVVF 85
Query: 85 FNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRE 144
F TR+ N + V + LD P A+ I + D +E EK + +
Sbjct: 86 FGTRESNNCDPFKHLCVLH-----DLDTPGAKRILDLDKYKE--EKGRALFRDTIGCGGD 138
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
SL ALW+ L K + KRI+LFTNED+P A + +A+D ++
Sbjct: 139 FSLGEALWLCSNLFSNVKVKMSHKRIMLFTNEDNPH-----ANDQAKAKQARAKAEDLRE 193
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
+GI ++L+ L P E F +S FY D++ D A +KL+D+ ++R + KR
Sbjct: 194 MGIFLDLMHLEKP-EGFDISLFYRDIVNTAEDQDLGVQFKASEKLDDLLKKVRAKEAKKR 252
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QE 323
+ R++ + + + + Y L++ V L +N P+KT+ ++TG+L+
Sbjct: 253 ALARLTLKLGPDVGLTVGIYNLVQKAVKPPTVKLYRESNEPVKTKTRIFHSNTGSLLLPS 312
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
KR Q Y I E ++KR L L GFKP+++LK +H RP+ F++P +
Sbjct: 313 DTKRSQTYGNRQIVLEKDETEQLKRFDEPSLVLIGFKPITFLKKHHFTRPAQFIYPEESL 372
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGMHM 440
+ GST +F AL L A+ Y N PR VALV QD E+ Q +PPG ++
Sbjct: 373 INGSTTLFHALLLRCLAQQVMAICRYTPRRNTPPRFVALVPQDEELDDQNIQSKPPGFNL 432
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
++LP++DDIR ++ T A++++V K ++ ++ +F F NP LQ+H+
Sbjct: 433 VFLPFADDIRKIDPPEKIT-----ANEEQVDKMKEIVHKLRF-NFRSDSFENPVLQQHFR 486
Query: 501 VLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGD-VKVSEA- 558
L+ALAL+ + I+D T+P E + R + VEEFK VY Y+ EG VK +A
Sbjct: 487 NLEALALDMLEPEPIEDLTLPKVEMIDR-RLGTLVEEFKELVYPPGYNPEGKAVKRKQAG 545
Query: 559 -SRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
S R A + D DKG L ++TV LK + L + ++E + S +
Sbjct: 546 DSDSRAEKKAKADISISEDDLRSYVDKGTLGKLTVPVLKEACRGYKLKGSKKQELVDSLV 605
>gi|426225836|ref|XP_004007067.1| PREDICTED: X-ray repair cross-complementing protein 6 [Ovis aries]
Length = 612
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 311/610 (50%), Gaps = 46/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D+ + T F +++ CI +II+ D +A+ F+
Sbjct: 36 SGRDSLIFLVDASRAMFES----QDEDELTPFDMSIQCIRSVYTNKIISSNRDLLAVVFY 91
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY---GIVSGS 142
T+K KN + ++V ++LD P A+ ++E D F+ + G +Y I GS
Sbjct: 92 GTKKDKNSVNFKNIYVL-----QELDNPGAKRVQELD----KFKGQEGKKYFQDQIGHGS 142
Query: 143 RENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDA 202
+ SL LWV L K + KRI+LFTNEDDP G +AK RT +A D
Sbjct: 143 -DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGD--DSAKASRART---KAGDL 196
Query: 203 QDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
+D GI ++L+ L F +S FY D+I E +D+ + + KLED+ ++R +
Sbjct: 197 RDTGIFLDLMHLKKRGG-FDISLFYRDIIVAEDEDVGIHFEESS-KLEDLLRKVRAKETR 254
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ + +++ + Y +++ + L TN P+KT+ +TG+L+
Sbjct: 255 KRVLYRLKLKLNKDVALTVGIYNMVQKAYRPSPVRLYRETNEPVKTKTRTFNVNTGSLLL 314
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 315 PSDTKRSQIYGHRQIVLEKEETEELKRFDEPGLILIGFKPLMMLKKHHYLRPSLFVYPEE 374
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
+ GS+ +F AL L AV Y N P VALV Q +E+ Q+ PPG
Sbjct: 375 SLINGSSTLFSALLTKCLEKEVLAVCRYTPRQNTPPCFVALVPQEEELDDQKIQLAPPGF 434
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ ++V K A+++++ K + F NP LQ+H
Sbjct: 435 QLVFLPYADDKRKV----PFTEKV-MANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQH 488
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV---- 553
+ ++ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 489 FRNMEALALDLMEPEQTVDLTLPKTEVMDKRLGSL--VDEFKELVYPPDYNPEGKVTKRK 546
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+ E+S ++ E + +E + KG L ++TV LK + L +K+ L
Sbjct: 547 QNDESSGSKRPKVELSEEELKAH-----VSKGTLGKLTVPTLKEACRMYGLKGGLKKQEL 601
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 602 LDVLTEHFQK 611
>gi|351708343|gb|EHB11262.1| ATP-dependent DNA helicase 2 subunit 1 [Heterocephalus glaber]
Length = 608
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 185/610 (30%), Positives = 303/610 (49%), Gaps = 45/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVD S MF + + + + T F +++ CI ++II+ D + + F+
Sbjct: 31 SGRDSLIFLVDVSRPMFES----QGENELTPFDMSIQCIESVYTSKIISSDRDFLGVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T+K KN + ++V ++LD P A+ + E D F+ + G + ++
Sbjct: 87 GTKKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGQQGQNHFQDLIGHGC 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTN+DDP GS +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNDDDPHGS--DSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I +E D DL + + +LED+ ++R +
Sbjct: 193 DTGIFLDLMHLKK-HGGFDISLFYRDIISVEEDADLGVHFEESS-RLEDLLRKVRAKETR 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + ++ + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLDRDTALTVGIYNLVQKASKPPPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E ++KR L L GFKPL+ LK +H LRPS F++P +
Sbjct: 311 PSDTKRSQIYGNRKIVLEKEETEQLKRFDEPGLVLIGFKPLALLKKHHYLRPSLFMYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYG--NPSNPRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L A+ Y + P VALV Q +E+ QV PPG
Sbjct: 371 SLVNGSSTLFSALLIKCLEKEVIALCRYTPRKSTPPYFVALVPQEEELDDQKIQVTPPGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V A+ +++ K A+++++ K + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRNVPAPEKVM-----ANPEQIDKMKAIVQKLRFK-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + + D T+P E M + + V+EFK VY +Y+ EG
Sbjct: 485 FRNLEALALDLMEPEQAVDLTLPKVEAMHK-RLGSLVDEFKDLVYPPDYNPEG------K 537
Query: 559 SRKRKAATENAAKECANYDWAD-----LADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+ KRK E++ + N + + A KG L ++TV LK L +K+ L
Sbjct: 538 ATKRKQDGESSGSKRPNVELSKEELKVHATKGTLGKLTVPMLKEACRVCGLRGGLKKQEL 597
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 598 VDALTQHFLK 607
>gi|144445950|ref|NP_620780.2| thyroid autoantigen [Rattus norvegicus]
gi|50927298|gb|AAH78718.1| Xrcc6 protein [Rattus norvegicus]
gi|149065807|gb|EDM15680.1| X-ray repair complementing defective repair in Chinese hamster
cells 6, isoform CRA_a [Rattus norvegicus]
Length = 608
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 309/610 (50%), Gaps = 45/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + +++V + LD P A+ + E D F+ + G ++ +
Sbjct: 87 GTEKDKNSVNFKSIYVL-----QDLDNPGAKRVLELDR----FKGQQGKKHFRDTIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G+ +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGN--DSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F VS FY D+I + E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKRGG-FDVSLFYRDIISIAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + +++ + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLGKDVALMVGVYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR + I +E E+KR L L GFKP+ LK++H LRPS F++P +
Sbjct: 311 PSDTKRSLTFGTRQIVLEKEETEELKRFDEPGLILMGFKPMVMLKNHHYLRPSLFLYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 371 SLVNGSSTLFSALLTKCVEKEVIAVCRYTARKNVSPYFVALVPQEEELDDQNIQVTPAGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A+++++ + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIVQKLRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG +
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEGKIA---- 539
Query: 559 SRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
KRKA E +A E + + DL KG L ++TV L+ A+ L + +K+ L
Sbjct: 540 --KRKADNEGSASKKPKVELSEEELKDLFAKGTLGKLTVPALRDICKAYGLKSGPKKQEL 597
Query: 614 ISRILTHMGK 623
+ + H+ K
Sbjct: 598 LEALSRHLEK 607
>gi|402884373|ref|XP_003905660.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 1
[Papio anubis]
Length = 609
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 306/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E DDL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDDDLRVHFEESS-KLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGVYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGM 438
V+GS+ +F AL L A+ Y N P VALV QD E+ QV PPG
Sbjct: 373 SLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQDEELDDQKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H
Sbjct: 433 QLVFLPFADDKRKM----PFTEKI-MATPEQVDKMKAIVEKLRFT-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 487 FRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKV---- 540
Query: 558 ASRKRKAATENAAKECANYDWADLA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
RK + + Y +L KG L + TV LK A+ L + +K+ L+
Sbjct: 541 TKRKHDNDGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|198637|gb|AAA39396.1| p70 Ku lupus autoantigen, partial [Mus musculus]
Length = 595
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 302/606 (49%), Gaps = 37/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 18 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 73
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V + LD P A+ + E D F+ + G ++ V
Sbjct: 74 GTEKDKNSVNFKNIYVL-----QDLDNPGAKRVLELDQ----FKGQQGKKHFRDTVGHGS 124
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G + +AK RT +A D +
Sbjct: 125 DYSLSEVLWVCANLFSDVQLKMSHKRIMLFTNEDDPHG--RDSAKASRART---KASDLR 179
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F VS FY D+I E +DL + + KLED+ ++R +
Sbjct: 180 DTGIFLDLMHLKKPGG-FDVSVFYRDIITTAEDEDLGVHFEESS-KLEDLLRKVRAKETK 237
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + + Y L++ L TN P+KT+ +TG+L+
Sbjct: 238 KRVLSRLKFKLGEDVVLMVGIYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 297
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Y I +E E+KR L L GFKP LK H LRPS FV+P +
Sbjct: 298 PSDTKRSLTYGTRQIVLEKEETEELKRFDEPGLILMGFKPTVMLKKQHYLRPSLFVYPEE 357
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y + N P VALV Q +E+ QV P G
Sbjct: 358 SLVSGSSTLFSALLTKCVEKKVIAVCRYTHRKNVSPYFVALVPQEEELDDQNIQVTPGGF 417
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ +++ K A+++ + + F NP LQ+H
Sbjct: 418 QLVFLPYADDKRKVPFTEKVT-----ANQEQIDKMKAIVQNVRFT-YRSDSFENPVLQQH 471
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG KV++
Sbjct: 472 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEG--KVAKR 528
Query: 559 SRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + +T K E + + KG L ++TV LK AH L + +K+ L+ +
Sbjct: 529 KQDDEGSTSKKPKVELSEEELKAHFRKGTLGKLTVPTLKDICKAHGLKSGPKKQELLDAL 588
Query: 618 LTHMGK 623
+ H+ K
Sbjct: 589 IRHLEK 594
>gi|146162847|ref|XP_001470738.1| ku P70 DNA helicase [Tetrahymena thermophila]
gi|146146270|gb|EDK31925.1| ku P70 DNA helicase [Tetrahymena thermophila SB210]
Length = 711
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 269/558 (48%), Gaps = 36/558 (6%)
Query: 17 DNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRL 76
+NEF + + K+ V++L+D + K+F DE F + + I K++II+ L
Sbjct: 29 ENEFIPDLISKKDAVIFLIDCNKKIFQNEF-----NDEVQFKVILKSIQSFFKSKIISSL 83
Query: 77 YDEVAICFFNTRKKKNLQDLNAV-FVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
D+V++ F+N ++ N + + V+N L P+A IK + ++FE++ G
Sbjct: 84 DDQVSVIFYNVKQTNNDLNFKGINIVYN------LSTPSAEMIKNVVKLGDNFERDFGF- 136
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
E + ALW + K SK RI LFTN D P K D
Sbjct: 137 -----ADNETPFHEALWTCNSIFTKLDSKKFIMRIFLFTNNDQPHSDNK-----DFLDKC 186
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQ 255
+A+ + I IEL PL+ +++F + FY+ +I + D++ + K+ D++ +
Sbjct: 187 FNQARTLAEKNIQIELFPLATRNQKFDIRKFYSSIITFDVDEINEAVIDTSDKVLDIQHR 246
Query: 256 LRKRMFSKRIVKRISFIIANGLSIELNTYA-LIRPTVPGAITWLDSVTNHPLKTERSFIC 314
LR++ + KR V R+ F + + + + + ++ P A L+S TN LK IC
Sbjct: 247 LRQKEYKKRAVNRLLFTLGDETRLGVKLFCPFVKQRRPLA-KQLESNTNKLLKRTVKHIC 305
Query: 315 ADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRP 373
+TG +L Q GE +K S +++EIK +RL GFKP LK YHN R
Sbjct: 306 KETGQSLYQNQISTCVHIGGEKVKVSKGDINEIKSFEEPGMRLIGFKPSGTLKAYHNYRT 365
Query: 374 STFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGG 431
S FV+P D V GS+ F AL M+ ++ A+ + + R AL+ Q+E
Sbjct: 366 SYFVYPDDYHVKGSSQSFHALISQMIAKDKIAIVRFIPRKGTQVRFCALLPQEESYDEDH 425
Query: 432 QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFA 491
PPG H+I+LPY+DD R + + S + + A + +DL +F F
Sbjct: 426 VQTPPGFHLIFLPYADDQRNLGSIRPQQKE--EVSRNLLNAAKMMCNALDLANFDFRNFE 483
Query: 492 NPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR-PGVVKAVEE-FKLSVYGDNYDE 549
+PSLQ+ +A LQA AL+E++ D PDEEGM R ++K EE KL V D+ +
Sbjct: 484 DPSLQKFFAHLQAHALQEENPENPADLIQPDEEGMKRCEDIIKLFEEALKLDVQDDDQPQ 543
Query: 550 EGDVKVSEASRKRKAATE 567
K R++K A E
Sbjct: 544 AAQKK----PRQKKVAVE 557
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 517 DETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKE--CA 574
DE P + G+ V + K Y D DE + E +++ A + ++E
Sbjct: 605 DEIKPKKRGVQNKKVTNQRKVNKKVEYSDEDDE---ISYEEKPKRKAAGKKQMSEEEKLI 661
Query: 575 NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
++ A+L ++ +T+ ELK YL L G+KE L+ IL H+
Sbjct: 662 SHVEANLKEEFNPDGLTISELKQYLKFKGLKNVGKKEELVDTILRHL 708
>gi|166900100|sp|P23475.5|XRCC6_MOUSE RecName: Full=X-ray repair cross-complementing protein 6; AltName:
Full=5'-deoxyribose-5-phosphate lyase Ku70;
Short=5'-dRP/AP lyase Ku70; AltName: Full=ATP-dependent
DNA helicase 2 subunit 1; AltName: Full=ATP-dependent
DNA helicase II 70 kDa subunit; AltName: Full=CTC
box-binding factor 75 kDa subunit; Short=CTC75;
Short=CTCBF; AltName: Full=DNA repair protein XRCC6;
AltName: Full=Ku autoantigen protein p70 homolog;
Short=Ku70
gi|3241858|dbj|BAA28874.1| Ku70 [Mus musculus]
gi|21594185|gb|AAH31422.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Mus musculus]
gi|148672590|gb|EDL04537.1| X-ray repair complementing defective repair in Chinese hamster
cells 6, isoform CRA_b [Mus musculus]
Length = 608
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 302/606 (49%), Gaps = 37/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V + LD P A+ + E D F+ + G ++ V
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QDLDNPGAKRVLELDQ----FKGQQGKKHFRDTVGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G + +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQLKMSHKRIMLFTNEDDPHG--RDSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F VS FY D+I E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKPGG-FDVSVFYRDIITTAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLGEDVVLMVGIYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Y I +E E+KR L L GFKP LK H LRPS FV+P +
Sbjct: 311 PSDTKRSLTYGTRQIVLEKEETEELKRFDEPGLILMGFKPTVMLKKQHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 371 SLVSGSSTLFSALLTKCVEKKVIAVCRYTPRKNVSPYFVALVPQEEELDDQNIQVTPGGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ +++ K A+++++ + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKVPFTEKVT-----ANQEQIDKMKAIVQKLRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG KV++
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEG--KVAKR 541
Query: 559 SRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + +T K E + + KG L ++TV LK AH L + +K+ L+ +
Sbjct: 542 KQDDEGSTSKKPKVELSEEELKAHFRKGTLGKLTVPTLKDICKAHGLKSGPKKQELLDAL 601
Query: 618 LTHMGK 623
+ H+ K
Sbjct: 602 IRHLEK 607
>gi|145587104|ref|NP_034377.2| X-ray repair cross-complementing protein 6 [Mus musculus]
gi|19548754|gb|AAL90774.1| Ku70 [Mus musculus]
gi|19548756|gb|AAL90775.1| Ku70 [Mus musculus]
gi|74138092|dbj|BAE25441.1| unnamed protein product [Mus musculus]
Length = 608
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 302/606 (49%), Gaps = 37/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V + LD P A+ + E D F+ + G ++ V
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QDLDNPGAKRVLELDQ----FKGQQGKKHFRDTVGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G + +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQLKMSHKRIMLFTNEDDPHG--RDSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F VS FY D+I E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKPGG-FDVSVFYRDIITTAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLGEDVVLMVGIYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Y I +E E+KR L L GFKP LK H LRPS FV+P +
Sbjct: 311 PSDTKRSLTYGTRQIVLEKEETEELKRFDEPGLILMGFKPTVMLKKQHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 371 SLVSGSSTLFSALLTKCVEKEVIAVCRYTPRKNVSPYFVALVPQEEELDDQNIQVTPGGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ +++ K A+++++ + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKVPFTEKVT-----ANQEQIDKMKAIVQKLRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG KV++
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEG--KVAKR 541
Query: 559 SRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + +T K E + + KG L ++TV LK AH L + +K+ L+ +
Sbjct: 542 KQDDEGSTSKKPKVELSEEELKAHFRKGTLGKLTVPTLKDICKAHGLKSGPKKQELLDAL 601
Query: 618 LTHMGK 623
+ H+ K
Sbjct: 602 IRHLEK 607
>gi|354505440|ref|XP_003514777.1| PREDICTED: X-ray repair cross-complementing protein 6 [Cricetulus
griseus]
gi|344258707|gb|EGW14811.1| ATP-dependent DNA helicase 2 subunit 1 [Cricetulus griseus]
Length = 608
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 304/610 (49%), Gaps = 45/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D + + F+
Sbjct: 31 SGRDSLIFLVDASRAMFDSQ--GEDEV--TPFDMSIQCIQSVYTSKIISSNRDLLGVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ + G ++ +
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGQQGKKHFQDTIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G+ +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHGN--DSAKASRART---KANDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKRRGG-FDISLFYRDIISIAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + +++ + Y LI+ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLRFKLGKDVALMVGIYNLIQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 311 PSDTKRSQTYGSRQIVLEKEETEELKRFDEPGLILMGFKPLVMLKKHHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y + N P VALV Q +E+ QV P G
Sbjct: 371 SLVNGSSTLFSALLTKCLEKEVMAVCRYTSRKNVPPYFVALVPQEEELDDQNIQVTPAGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A++ ++ + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIVHKLRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKAEAIKK-RLGSLADEFKELVYPPGYNPEG------K 537
Query: 559 SRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+ KRK E +A E + + KG L ++TV LK A+ L + +K+ L
Sbjct: 538 ATKRKQDDEGSASKKPKVELSEEELKAHFAKGTLGKLTVPTLKEVCKAYGLKSGPKKQEL 597
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 598 LDALTRHFHK 607
>gi|326430343|gb|EGD75913.1| hypothetical protein PTSG_00622 [Salpingoeca sp. ATCC 50818]
Length = 575
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 288/590 (48%), Gaps = 47/590 (7%)
Query: 41 MFSTTCPAED--QTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA 98
MF P D + T F AV + +L+ +I+ D V I FF+T +K D
Sbjct: 1 MFDEFTPPTDDEEAGSTFFSTAVKAVHSALRNKIVCSDKDLVGIVFFSTEHRKGDSDPEH 60
Query: 99 VFVFNVAEREQLDRPTARFIKEFDHI---EESFEKEIGSQYGIVSGSRENSLYNALWVAQ 155
V++ + LD P+A I+ + I E F + IGS S SL +ALW
Sbjct: 61 VYIL-----QDLDVPSAEQIQLLESIADGEYDFSEHIGS-------SDRYSLNDALWACG 108
Query: 156 GLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS 215
L +K KRILLFTN D+P + +D+ R +A+D DLGI I+L+ +S
Sbjct: 109 NLFSNVRTKVETKRILLFTNVDNPHST-----DDDLRRQLETKARDLTDLGIEIDLMHMS 163
Query: 216 PPDEEFKVSHFYADMIGLEGDDLALFMPSA--GQKLEDMKDQLRKRMFSKRIVKRISFII 273
+F + FY ++ + DD P A Q E + ++R + KR I + I
Sbjct: 164 SDAAKFNMDAFYRPLV-VNADD----EPEAQVSQGFESLLARVRCKAQKKRARMTIPWQI 218
Query: 274 ANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA-LMQEPAKRFQPYK 332
++ I + Y L+ + TWLD N + ++ F C++T + L+ K Y
Sbjct: 219 SDDFFISIKVYNLVGSATKASYTWLDGRDNEEVTSKTRFFCSETSSPLLSTDMKYSFTYG 278
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
GE I F E+ +++ + L L GFKP S L +N++ S+F++P + V GST +F
Sbjct: 279 GEKIVFDKTEVDQMRTFGSPGLLLLGFKPRSALHKEYNVKKSSFIYPDESLVGGSTRVFA 338
Query: 393 ALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV-RAGGQVEPPGMHMIYLPYSDDI 449
A LRL+R + +N P VAL+ Q+E V G QV PPG H+I LP+++D+
Sbjct: 339 AFLDRCLRLDRVPICRLIPRANSPPEFVALLPQEERVDEDGNQVVPPGFHIITLPFAEDM 398
Query: 450 RPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEE 509
R +++ P ++++V L+K ++ FS +F NPSLQ+HY+VL+ALAL
Sbjct: 399 RSLKKKKG-----PEPTEEQVGAMKKLIKSMNFTGFSSEKFENPSLQKHYSVLEALALNR 453
Query: 510 DDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENA 569
D + D T D E ++ ++ + +L +Y YD E +S KRKA T
Sbjct: 454 DITEDPPDHTKVDVEDLSSKARERSRKVAEL-LYPAGYDPESIASAKASSAKRKAGTGGT 512
Query: 570 AKEC-----ANYDWADLA---DKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
AK A D A LA +G L ++TV ELK + + + G+++
Sbjct: 513 AKRAKTTASAEVDTARLATLHGEGNLSKLTVAELKAAIQSKGHAPRGKRK 562
>gi|148672589|gb|EDL04536.1| X-ray repair complementing defective repair in Chinese hamster
cells 6, isoform CRA_a [Mus musculus]
Length = 617
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 302/606 (49%), Gaps = 37/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 40 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 95
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V + LD P A+ + E D F+ + G ++ V
Sbjct: 96 GTEKDKNSVNFKNIYVL-----QDLDNPGAKRVLELDQ----FKGQQGKKHFRDTVGHGS 146
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G + +AK RT +A D +
Sbjct: 147 DYSLSEVLWVCANLFSDVQLKMSHKRIMLFTNEDDPHG--RDSAKASRART---KASDLR 201
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F VS FY D+I E +DL + + KLED+ ++R +
Sbjct: 202 DTGIFLDLMHLKKPGG-FDVSVFYRDIITTAEDEDLGVHFEESS-KLEDLLRKVRAKETK 259
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + + Y L++ L TN P+KT+ +TG+L+
Sbjct: 260 KRVLSRLKFKLGEDVVLMVGIYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 319
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Y I +E E+KR L L GFKP LK H LRPS FV+P +
Sbjct: 320 PSDTKRSLTYGTRQIVLEKEETEELKRFDEPGLILMGFKPTVMLKKQHYLRPSLFVYPEE 379
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 380 SLVSGSSTLFSALLTKCVEKKVIAVCRYTPRKNVSPYFVALVPQEEELDDQNIQVTPGGF 439
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ +++ K A+++++ + F NP LQ+H
Sbjct: 440 QLVFLPYADDKRKVPFTEKVT-----ANQEQIDKMKAIVQKLRFT-YRSDSFENPVLQQH 493
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG KV++
Sbjct: 494 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEG--KVAKR 550
Query: 559 SRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + +T K E + + KG L ++TV LK AH L + +K+ L+ +
Sbjct: 551 KQDDEGSTSKKPKVELSEEELKAHFRKGTLGKLTVPTLKDICKAHGLKSGPKKQELLDAL 610
Query: 618 LTHMGK 623
+ H+ K
Sbjct: 611 IRHLEK 616
>gi|67970116|dbj|BAE01402.1| unnamed protein product [Macaca fascicularis]
gi|355785032|gb|EHH65883.1| hypothetical protein EGM_02739 [Macaca fascicularis]
gi|380787409|gb|AFE65580.1| X-ray repair cross-complementing protein 6 [Macaca mulatta]
gi|383417243|gb|AFH31835.1| X-ray repair cross-complementing protein 6 [Macaca mulatta]
Length = 609
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 306/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGVYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGM 438
V+GS+ +F AL L A+ Y N P VALV QD E+ QV PPG
Sbjct: 373 SLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQDEELDDQKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H
Sbjct: 433 QLVFLPFADDKRKM----PFTEKI-MATPEQVDKMKAIVEKLRFT-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 487 FRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKV---- 540
Query: 558 ASRKRKAATENAAKECANYDWADLA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
RK + + Y +L KG L + TV LK A+ L + +K+ L+
Sbjct: 541 TKRKHDNDGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|395819670|ref|XP_003783203.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 1
[Otolemur garnettii]
Length = 609
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 191/611 (31%), Positives = 309/611 (50%), Gaps = 47/611 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D+ + T F +++ CI ++II+ D +A+ F+
Sbjct: 32 SGRDSLIFLVDASRAMFES----QDEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFY 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T+K+KN + ++V ++LD P A+ I E D F+ + G ++ ++
Sbjct: 88 GTKKEKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGKKHFQDLIGHGS 138
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTN+D+P G +AK RT +A D +
Sbjct: 139 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNDDNPHGD--DSAKASRART---KAGDLR 193
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
+ GI ++L+ L P + +S FY D+I + E +DL + + +LED+ ++R +
Sbjct: 194 ETGIFLDLMHLKKPGG-YDISLFYRDIISIAEDEDLGVHFEESS-RLEDLLRKVRAKENK 251
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ + F ++ +++ L Y L++ V A L TN P+KT+ +TG+L+
Sbjct: 252 KRVLFSLKFKLSKDIALTLGVYNLVQKAVKPAPIRLYRETNEPVKTKTRTFNVNTGSLLL 311
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 312 PSDTKRSQMYGSRQIVLEKEETEELKRFDEPGLILIGFKPLEMLKKHHYLRPSLFVYPEE 371
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGM 438
V GS+ +F AL L AV Y N P VALV Q+E + QV P G
Sbjct: 372 SLVNGSSTLFSALLTKCLEKEVLAVCRYTPRKNIPPYFVALVPQEEELDGQKIQVTPSGF 431
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ ++V K A+++++ K + F NP LQ+H
Sbjct: 432 QLVFLPYADDKRKVPFPEKVT-----ANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQH 485
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ + E
Sbjct: 486 FRNLEALALDLMEPEQAVDLTLPKVEAMNERLGSL--VDEFKELVYPPDYNPK------E 537
Query: 558 ASRKRKAATENAAKECANYDWAD-----LADKGKLKEMTVQELKLYLMAHNLSTTGRKET 612
K+K E + ++++ KG L + TV LK A+ L +K+
Sbjct: 538 KITKKKQDDEGPGSKRPKVEFSEEELKAHVSKGTLGKFTVPMLKEACRAYGLKGGMKKQE 597
Query: 613 LISRILTHMGK 623
L+ + H K
Sbjct: 598 LLDTLTKHFQK 608
>gi|74138629|dbj|BAE27135.1| unnamed protein product [Mus musculus]
gi|74138633|dbj|BAE27137.1| unnamed protein product [Mus musculus]
gi|74138637|dbj|BAE27139.1| unnamed protein product [Mus musculus]
Length = 608
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 301/606 (49%), Gaps = 37/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V + LD P A+ + E D F+ + G ++ V
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QDLDNPGAKRVLELDQ----FKGQQGKKHFRDTVGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G + +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQLKMSHKRIMLFTNEDDPHG--RDSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F VS FY D+I D DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKPGG-FDVSVFYRDIITTAEDGDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLGEDVVLMVGIYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Y I +E E+KR L L GFKP LK H LRPS FV+P +
Sbjct: 311 PSDTKRSLTYGTRQIVLEKEETEELKRFDEPGLILMGFKPTVMLKKQHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 371 SLVSGSSTLFSALLTKCVEKKVIAVCRYTPRKNVSPYFVALVPQEEELDDQNIQVTPGGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ +++ K A+++++ + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKVPFTEKVT-----ANQEQIDKMKAIVQKLRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG KV++
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEG--KVAKR 541
Query: 559 SRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + +T K E + + KG L ++TV LK AH L + +K+ L+ +
Sbjct: 542 KQDDEGSTSKKPKVELSEEELKAHFRKGTLGKLTVPTLKDICKAHGLKSGPKKQELLDAL 601
Query: 618 LTHMGK 623
+ H+ K
Sbjct: 602 IRHLEK 607
>gi|1469515|gb|AAC52675.1| DNA repair enzyme [Mus musculus]
Length = 608
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 301/606 (49%), Gaps = 37/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V + LD P A+ + E D F+ + G ++ V
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QDLDNPGAKRVLELDQ----FKGQQGKKHFRDTVGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G + +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQLKMSHKRIMLFTNEDDPHG--RDSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F VS FY D+I E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKPGG-FDVSVFYRDIITTAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + + + + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLGEDVVLMVGIYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Y I +E E+KR L L GFKP LK H LRPS FV+P +
Sbjct: 311 PSDTKRSLTYGTRQIVLEKEETEELKRFDEPGLILMGFKPTVMLKKQHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 371 SLVSGSSTLFSALLTKCVEKKVIAVCRYTPRKNVSPYFVALVPQEEELDDQNIQVTPGGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T A+ +++ K A+++ + + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKVPFTEKVT-----ANQEQIDKMKAIVQNVRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG KV++
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEG--KVAKR 541
Query: 559 SRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + +T K E + + KG L ++TV LK AH L + +K+ L+ +
Sbjct: 542 KQDDEGSTSKKPKVELSEEELKAHFRKGTLGKLTVPTLKDICKAHGLKSGPKKQELLDAL 601
Query: 618 LTHMGK 623
+ H+ K
Sbjct: 602 IRHLEK 607
>gi|355563715|gb|EHH20277.1| hypothetical protein EGK_03094 [Macaca mulatta]
Length = 609
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 305/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGVYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGM 438
V+GS+ +F AL L A+ Y N P VALV QD E+ QV PPG
Sbjct: 373 SLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQDEELDDQKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H
Sbjct: 433 QLVFLPFADDKRKM----PFTEKI-MATPEQVDKMKAIVEKLRFT-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 487 FRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKV---- 540
Query: 558 ASRKRKAATENAAKECANYDWADLA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
RK + + Y +L KG L TV LK A+ L + +K+ L+
Sbjct: 541 TKRKHDNDGSGSKRPKVEYSEEELKTHISKGTLVNFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|18181882|dbj|BAB83858.1| G22p1 [Rattus norvegicus]
Length = 609
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 308/610 (50%), Gaps = 45/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFESQ--GEDEL--TPFDMSIQCIQSVYTSKIISSDRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + +++V + LD P A+ + E D F+ + G ++ +
Sbjct: 87 GTEKDKNSVNFKSIYVL-----QDLDNPGAKRVLELDR----FKGQQGKKHFRDTIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G+ +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGN--DSAKASRART---KASDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F VS FY D+I + E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKRGG-FDVSLFYRDIISIAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + +++ + Y L++ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLKFKLGKDVALMVGVYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR + I +E E+KR L L GFKP+ LK++H LRPS F++P +
Sbjct: 311 PSDTKRSLTFGTRQIVLEKEETEELKRFDEPGLILMGFKPMVMLKNHHYLRPSLFLYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL + AV Y N P VALV Q +E+ QV P G
Sbjct: 371 SLVNGSSTLFSALLTKCVEKEVIAVCRYTARKNVSPYFVALVPQEEELDDQNIQVTPAGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A ++++ + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAHVQKLRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG +
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEGKIA---- 539
Query: 559 SRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
KRKA E +A E + + DL KG L ++TV L+ A+ L + +K+ L
Sbjct: 540 --KRKADNEGSASKKPKVELSEEELKDLFAKGTLGKLTVPALRDICKAYGLKSGPKKQEL 597
Query: 614 ISRILTHMGK 623
+ + H+ K
Sbjct: 598 LEALSRHLEK 607
>gi|410345624|gb|JAA40659.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Pan troglodytes]
Length = 609
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 309/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ I E D + + +K G GS +
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKRFQDMMG--HGS-D 140
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D
Sbjct: 141 YSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRD 195
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + K
Sbjct: 196 TGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRK 253
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 254 RALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLP 313
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 314 SDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEES 373
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMH 439
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 374 LVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQ 433
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 434 LVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRFT-YRSDSFENPVLQQHF 487
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV--- 555
L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 488 RNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYTPDYNPEGKVTKRKH 545
Query: 556 -SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 546 DNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|49457432|emb|CAG47015.1| G22P1 [Homo sapiens]
Length = 609
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 308/609 (50%), Gaps = 47/609 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ I E D + + +K G GS +
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKRFQDMMG--HGS-D 140
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK--DA 202
SL LWV L K + KRI+LFTNED+P G ND T+ + R K D
Sbjct: 141 YSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHG-------NDSTKASRARTKAGDL 193
Query: 203 QDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMF 261
+D GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 194 RDTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKET 251
Query: 262 SKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGAL 320
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L
Sbjct: 252 RKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLL 311
Query: 321 MQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPS 380
+ KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P
Sbjct: 312 LPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPE 371
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPG 437
+ V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 372 ESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPG 431
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQR 497
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+
Sbjct: 432 FQLVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRFT-YRSDSFENPVLQQ 485
Query: 498 HYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV- 555
H+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 486 HFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKVTKR 543
Query: 556 ---SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKET 612
+E S ++ E + +E + KG L + TV LK A+ L + +K+
Sbjct: 544 KHDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQE 598
Query: 613 LISRILTHM 621
L+ + H
Sbjct: 599 LLEALTKHF 607
>gi|4503841|ref|NP_001460.1| X-ray repair cross-complementing protein 6 [Homo sapiens]
gi|125729|sp|P12956.2|XRCC6_HUMAN RecName: Full=X-ray repair cross-complementing protein 6; AltName:
Full=5'-deoxyribose-5-phosphate lyase Ku70; Short=5'-dRP
lyase Ku70; AltName: Full=70 kDa subunit of Ku antigen;
AltName: Full=ATP-dependent DNA helicase 2 subunit 1;
AltName: Full=ATP-dependent DNA helicase II 70 kDa
subunit; AltName: Full=CTC box-binding factor 75 kDa
subunit; Short=CTC75; Short=CTCBF; AltName: Full=DNA
repair protein XRCC6; AltName: Full=Lupus Ku autoantigen
protein p70; Short=Ku70; AltName: Full=Thyroid-lupus
autoantigen; Short=TLAA; AltName: Full=X-ray repair
complementing defective repair in Chinese hamster cells
6
gi|15825664|pdb|1JEQ|A Chain A, Crystal Structure Of The Ku Heterodimer
gi|15825716|pdb|1JEY|A Chain A, Crystal Structure Of The Ku Heterodimer Bound To Dna
gi|178650|gb|AAA51733.1| p70 autoantigen [Homo sapiens]
gi|250497|gb|AAB22381.1| Ku autoantigen p70 subunit [Homo sapiens]
gi|307095|gb|AAA36155.1| Ku protein subunit [Homo sapiens]
gi|339667|gb|AAA61177.1| thyroid autoantigen [Homo sapiens]
gi|14249924|gb|AAH08343.1| XRCC6 protein [Homo sapiens]
gi|14603133|gb|AAH10034.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Homo sapiens]
gi|15082480|gb|AAH12154.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Homo sapiens]
gi|17390603|gb|AAH18259.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Homo sapiens]
gi|48735093|gb|AAH72449.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Homo sapiens]
gi|57165052|gb|AAW34364.1| thyroid autoantigen 70kDa (Ku antigen) [Homo sapiens]
gi|119580850|gb|EAW60446.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 (Ku autoantigen, 70kDa), isoform CRA_a [Homo
sapiens]
gi|119580851|gb|EAW60447.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 (Ku autoantigen, 70kDa), isoform CRA_a [Homo
sapiens]
gi|167773973|gb|ABZ92421.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 (Ku autoantigen, 70kDa) [synthetic construct]
gi|168277948|dbj|BAG10952.1| ATP-dependent DNA helicase 2 subunit 1 [synthetic construct]
gi|190689433|gb|ACE86491.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 (Ku autoantigen, 70kDa) protein [synthetic
construct]
gi|190690795|gb|ACE87172.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 (Ku autoantigen, 70kDa) protein [synthetic
construct]
gi|343961271|dbj|BAK62225.1| ATP-dependent DNA helicase 2 subunit 1 [Pan troglodytes]
gi|410217142|gb|JAA05790.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Pan troglodytes]
gi|410259462|gb|JAA17697.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Pan troglodytes]
Length = 609
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 309/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ I E D + + +K G GS +
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKRFQDMMG--HGS-D 140
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D
Sbjct: 141 YSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRD 195
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + K
Sbjct: 196 TGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRK 253
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 254 RALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLP 313
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 314 SDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEES 373
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMH 439
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 374 LVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQ 433
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 434 LVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRFT-YRSDSFENPVLQQHF 487
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV--- 555
L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 488 RNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKVTKRKH 545
Query: 556 -SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 546 DNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|197101575|ref|NP_001126888.1| X-ray repair cross-complementing protein 6 [Pongo abelii]
gi|55733046|emb|CAH93208.1| hypothetical protein [Pongo abelii]
Length = 609
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 305/603 (50%), Gaps = 45/603 (7%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKK 90
+++LVDAS MF + + + + T F +++ CI ++II+ D +A+ F+ T K
Sbjct: 38 LIFLVDASKAMFES----QSENELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKD 93
Query: 91 KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLY 148
KN + ++V ++LD P A+ I E D F+ + G + ++ + SL
Sbjct: 94 KNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQELMGHGSDYSLS 144
Query: 149 NALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGIS 208
LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D GI
Sbjct: 145 EVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRDTGIF 199
Query: 209 IELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVK 267
++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + KR +
Sbjct: 200 LDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRKRALS 257
Query: 268 RISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQEPAK 326
R+ + + I + Y L++ + L TN P+KT+ R+F + G L+ K
Sbjct: 258 RLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTK 317
Query: 327 RFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG 386
R Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P + V+G
Sbjct: 318 RSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIG 377
Query: 387 STCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYL 443
S+ +F AL L A+ Y N P VALV Q +E+ QV PPG +++L
Sbjct: 378 SSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFL 437
Query: 444 PYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQ 503
P++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+ L+
Sbjct: 438 PFADDKRKM----PFTEKI-MATPEQVDKMKAIVEKLRF-TYRSDSFENPVLQQHFRNLE 491
Query: 504 ALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV----SEA 558
ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V +E
Sbjct: 492 ALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKVTKRKHDNEG 549
Query: 559 SRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
S ++ E + +E + KG L + TV LK A+ L + +K+ L+ +
Sbjct: 550 SGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALT 604
Query: 619 THM 621
H
Sbjct: 605 KHF 607
>gi|426394616|ref|XP_004063587.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 1
[Gorilla gorilla gorilla]
Length = 609
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 194/608 (31%), Positives = 308/608 (50%), Gaps = 45/608 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 373 SLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A++ ++ + F NP LQ+H
Sbjct: 433 QLVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVDKLRFT-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV-- 555
+ L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 487 FRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKVTKRK 544
Query: 556 --SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L
Sbjct: 545 HDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQEL 599
Query: 614 ISRILTHM 621
+ + H
Sbjct: 600 LEALTKHF 607
>gi|440893630|gb|ELR46327.1| X-ray repair cross-complementing protein 6 [Bos grunniens mutus]
Length = 605
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 307/610 (50%), Gaps = 48/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D+ + T F +++ CI +II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFES----QDEDELTPFDMSIQCIRSVYTNKIISSNRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY---GIVSGS 142
T+K KN + ++V ++LD P + ++E D F+ + G +Y I GS
Sbjct: 87 GTKKDKNSVNFKNIYVL-----QELDNPGVKRVQELD----KFKGQEGKKYFQDQIGHGS 137
Query: 143 RENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDA 202
+ SL LWV L K + KRI+LFTNEDDP G +AK RT +A D
Sbjct: 138 -DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGD--DSAKASRART---KAGDL 191
Query: 203 QDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
+D GI ++L+ L F +S FY D+I E +D+ + + KLED+ ++R +
Sbjct: 192 RDTGIFLDLMHLKKRGG-FDISLFYRDVIIAENEDVGIHFEESS-KLEDLLRKVRAKETR 249
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ + +++ + Y +++ L TN P+KT+ +TG+L+
Sbjct: 250 KRVLSRLKLKLNKDVTLTVGIYNMVQKAYRPPPVRLYRETNEPVKTKTRTFNVNTGSLLL 309
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L GFKPL LK +H LR S FV+P +
Sbjct: 310 PSDTKRSQTYSHRQIVLEKEETEELKRFDEPGFILIGFKPLMMLKKHHYLRHSLFVYPEE 369
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
+ GS+ +F AL L AV Y N P VALV Q +E+ QV PPG
Sbjct: 370 SLINGSSTLFSALLTKCLEKEVMAVCRYTPRRNSPPCFVALVPQEEELDDQKIQVAPPGF 429
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ ++V K A+++++ K S F NP LQ+H
Sbjct: 430 QLVFLPYADDKRKV----PFTEKV-MANPEQVDKMKAIVQKLRFKSDS---FENPVLQQH 481
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV---- 553
+ ++ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 482 FRNMEALALDLMEPEQAVDLTLPKTEVMDKRLGSL--VDEFKELVYPPDYNPEGKVTKRK 539
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
K E+S ++ E + +E + KG L ++TV LK + L +K+ L
Sbjct: 540 KDDESSGSKRPKVELSEEELKAH-----VSKGTLGKLTVPALKEACRMYGLKGGLKKQEL 594
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 595 LDVLTEHFQK 604
>gi|343959320|dbj|BAK63517.1| ATP-dependent DNA helicase 2 subunit 1 [Pan troglodytes]
Length = 609
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 308/606 (50%), Gaps = 41/606 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ I E D + + +K G GS +
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKRFQDMMG--HGS-D 140
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D
Sbjct: 141 YSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRD 195
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + K
Sbjct: 196 TGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRK 253
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 254 RALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLP 313
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 314 SDTKRSQIYGSRQIILEKEETEELKRPDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEES 373
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMH 439
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 374 LVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQ 433
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 434 LVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRF-TYRSDSFENPVLQQHF 487
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV---- 555
L+ALAL+ + + D T+P E M + + V+EFK VY +Y+ EG V
Sbjct: 488 RNLEALALDLMEPEQAVDLTLPKVEAMNK-RLGSLVDEFKELVYPPDYNPEGKVTKRKHD 546
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLIS 615
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 547 NEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLE 601
Query: 616 RILTHM 621
+ H
Sbjct: 602 ALTKHF 607
>gi|355729448|gb|AES09871.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Mustela putorius furo]
Length = 573
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 281/536 (52%), Gaps = 36/536 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVD S MF + E + + T F +++ CI +II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDGSRAMFES----EGEDEMTPFDMSIQCILSVYTNKIISSDQDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ E G ++ ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGEQGKEHFQDLIGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHGL--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I E +DL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKRGG-FDISLFYQDIISTAEDEDLGVHFEESS-KLEDLLRKVRAKETK 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F ++ +++ + Y +++ V L TN P+K++ +TG+L+
Sbjct: 253 KRVLCRLKFKLSKDIALTVGMYNMVQKAVKPPPVRLYRETNEPVKSKTRTFNVNTGSLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL+ LK +H+LRPS FV+P +
Sbjct: 313 PSDTKRSQSYGSREIVLEKEETEELKRFDEPGLILIGFKPLTMLKKHHHLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y N P VAL+ Q +E+ + QV PPG
Sbjct: 373 SLVNGSSTLFHALLTKCLEKEVMAVCRYTARQNIPPYFVALLPQEEELDKQKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A+++++ ++ F NP LQ+H
Sbjct: 433 QLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIIQKLRF-NYRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV 553
+ L+ALAL+ + ++ D T+P E + R G + V EFK VY +Y+ EG V
Sbjct: 487 FRNLEALALDLMEPEQVVDLTLPKIEAIDKRLGFL--VSEFKELVYPPDYNPEGKV 540
>gi|189055002|dbj|BAG37986.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 309/607 (50%), Gaps = 43/607 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ I E D + + +K G GS +
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKRFQDMMG--HGS-D 140
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D
Sbjct: 141 YSLSEVLWVCANLFSDVQFKMSHKRIVLFTNEDNPHGN--DSAKASRART---KAGDLRD 195
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + K
Sbjct: 196 TGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRK 253
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 254 RALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLP 313
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 314 SDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEES 373
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMH 439
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 374 LVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQ 433
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 434 LVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRFT-YRSDSFENPVLQQHF 487
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV--- 555
L+ALAL+ + + D T+P E M R G + V+EFK V+ +Y+ EG V
Sbjct: 488 RNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVHPPDYNPEGKVTKRKH 545
Query: 556 -SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 546 DNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
Query: 615 SRILTHM 621
+ H
Sbjct: 601 EALTKHF 607
>gi|57092715|ref|XP_531714.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 1
[Canis lupus familiaris]
Length = 608
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 307/610 (50%), Gaps = 45/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVD S MF + + + + T F +++ CI +II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDGSRAMFES----QGEVELTPFDMSIQCIQSVYTNKIISSNQDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ E G ++ ++
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGERGKKHFQDLIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G+ +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHGN--DSAKASRART---KAGDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKKRGG-FDISLFYRDIISIAEDEDLGVHFEESS-KLEDLLRKVRAKETR 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ ++ ++ + Y +++ V A L TN P+K++ +TG+L+
Sbjct: 251 KRVLCRLKLKLSKDTALTVGIYNMVQKAVRPAPVRLYRETNEPVKSKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 311 PSDTKRSQNYGNRQIVLEKEETEELKRFDEPGLILIGFKPLIMLKKHHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +FIAL L AV Y N P VAL+ Q +E+ QV PPG
Sbjct: 371 SLVNGSSTLFIALLTKCLEKEVMAVCRYTPRRNIPPYFVALLPQEEELDDQKIQVTPPGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A+++++ ++ F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIVQKLRF-NYRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
+ L+ LAL+ + + +D T+P E + R G + V EFK VY +Y EG +
Sbjct: 485 FRNLEVLALDLMEPEQAEDLTLPKIEAIDKRLGSL--VNEFKELVYPPDYSPEG-----K 537
Query: 558 ASRKRK----AATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
A ++R+ ++ E + + +KG L ++TV LK L +K+ L
Sbjct: 538 APKRRQDDEGLGSKRPKMELSEEELRAHVNKGTLGKLTVPMLKEACRVCGLKGGLKKQEL 597
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 598 LDILTKHFQK 607
>gi|300795366|ref|NP_001179175.1| X-ray repair cross-complementing protein 6 [Bos taurus]
gi|296486919|tpg|DAA29032.1| TPA: X-ray repair complementing defective repair in Chinese hamster
cells 6 [Bos taurus]
Length = 612
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 305/610 (50%), Gaps = 46/610 (7%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +D+ + T F +++ CI +II+ D +A+ F+
Sbjct: 36 SGRDSLIFLVDASRAMFES----QDEDELTPFDMSIQCIRSVYTNKIISSNRDLLAVVFY 91
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY---GIVSGS 142
T+K KN + ++V ++LD P + ++E D F+ + G +Y I GS
Sbjct: 92 GTKKDKNSVNFKNIYVL-----QELDNPGVKRVQELD----KFKGQEGKKYFEDQIGHGS 142
Query: 143 RENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDA 202
+ SL LWV L K + KRI+LFTNEDDP G +AK RT +A D
Sbjct: 143 -DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGD--DSAKASRART---KAGDL 196
Query: 203 QDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
+D GI ++L+ L F S FY D+I E +D+ + + KLED+ ++R +
Sbjct: 197 RDTGIFLDLMHLKKRGG-FDTSLFYRDVIIAENEDIGIHFEESS-KLEDLLRKVRAKETR 254
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ + +++ + Y +++ L TN P+KT+ +TG+L+
Sbjct: 255 KRVLSRLKLKLNKDVTLTVGIYNMVQKAYRPPPVRLYRETNEPVKTKTRTFNVNTGSLLL 314
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L GFKPL LK +H LR S FV+P +
Sbjct: 315 PSDTKRSQTYSHRQIVLEKEETEELKRFDEPGFILIGFKPLMMLKKHHYLRHSLFVYPEE 374
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
+ GS+ +F AL L AV Y N P VALV Q +E+ QV PPG
Sbjct: 375 SLINGSSTLFSALLTKCLEKEVMAVCRYTPRRNSPPCFVALVPQEEELDDQKIQVAPPGF 434
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ ++V K A+++++ K + F NP LQ+H
Sbjct: 435 QLVFLPYADDKRKV----PFTEKV-MANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQH 488
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV---- 553
+ ++ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 489 FRNMEALALDLMEPEQAVDLTLPKTEVMDKRLGSL--VDEFKELVYPPDYNPEGKVTKRK 546
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
K E+ ++ E + +E + KG L ++TV LK + L +K+ L
Sbjct: 547 KDDESYGSKRPKVELSEEELKAH-----VSKGTLGKLTVPALKEACRMYGLKGGLKKQEL 601
Query: 614 ISRILTHMGK 623
+ + H K
Sbjct: 602 LDVLTEHFQK 611
>gi|1836065|gb|AAB46854.1| Ku70=DNA-dependent protein kinase 70 kda DNA-binding subunit/DNA-PK
Ku70 subunit [Chinese hamsters, V79 cells, Peptide, 608
aa]
Length = 608
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 187/605 (30%), Positives = 300/605 (49%), Gaps = 35/605 (5%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + ED+ T F +++ CI ++II+ D + + F+
Sbjct: 31 SGRDSLIFLVDASRAMFDSQ--GEDEI--TPFDMSIQCIQSVYTSKIISSNRDLLGVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ + G ++ +
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGQQGKKHFQDTIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNEDDP G+ +AK RT +A D +
Sbjct: 138 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHGN--DSAKASRART---KANDLR 192
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L F +S FY D++ + E +DL + + KLED+ ++R +
Sbjct: 193 DTGIFLDLMHLKRRGG-FDISLFYRDIMSIAEDEDLGVHFEESS-KLEDLLRKVRAKETK 250
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM- 321
KR++ R+ F + +++ + Y LI+ L TN P+KT+ +TG+L+
Sbjct: 251 KRVLSRLRFKLGKDVALMVGIYNLIQKANKPFPVRLYRETNEPVKTKTRTFNVNTGSLLL 310
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFK L LK +H LRPS FV+P +
Sbjct: 311 PSDTKRSQTYGSRQIVLEKEETEELKRFDEPGLILMGFKALVMLKKHHYLRPSLFVYPEE 370
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V GS+ +F AL L AV Y + N P VALV Q +E+ QV P G
Sbjct: 371 SLVNGSSTLFSALLTKCLEKEVMAVCRYTSRKNVPPYFVALVPQEEELDDQNIQVTPAGF 430
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LPY+DD R V T+ V A+ +++ K A++ + + F NP LQ+H
Sbjct: 431 QLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIVHNVRFT-YRSDSFENPVLQQH 484
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG +
Sbjct: 485 FRNLEALALDMMESEQVVDLTLPKAEAIKK-RLGSLADEFKELVYPPGYNPEGKATKRKQ 543
Query: 559 SRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
+ A+ + + A A KG L ++TV LK A+ L + +K+ L+ +
Sbjct: 544 DDEGSASKKPKEELSEEELKAHFA-KGTLGKLTVPTLKEVCKAYGLKSGPKKQELLDALT 602
Query: 619 THMGK 623
H K
Sbjct: 603 RHFQK 607
>gi|410896180|ref|XP_003961577.1| PREDICTED: X-ray repair cross-complementing protein 5-like
[Takifugu rubripes]
Length = 608
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 303/613 (49%), Gaps = 39/613 (6%)
Query: 21 YQEHEAT-KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDE 79
+++++ T ++ +V+LVDAS +MF ED ++F +++ + ++II+ D
Sbjct: 23 FRDYKVTGRDSLVFLVDASKEMFVK---GED-GQPSNFDLSMQVVRSVYTSKIISSHRDL 78
Query: 80 VAICFFNTRKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY-G 137
+A+ F+ T + KN + V+V++ LD P A+ ++E D + + E G++
Sbjct: 79 MALVFYGTEQSKNPSNSFKHVYVYH-----NLDEPGAKRVQEVD----ALQGEKGARLME 129
Query: 138 IVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
GS E SL +ALW L + + KR+++FT D+P G AK+ RT
Sbjct: 130 KTMGSGETSLGDALWCCANLYSDIKLRLSFKRLMIFTCRDEPHGG--DTAKDRQART--- 184
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALFMPSAGQKLEDMKDQL 256
+A D ++ G+ I+L+ L P F VS F+ D+I + + +L L + G KLED+K ++
Sbjct: 185 KASDLKETGVFIDLMHLMKPGG-FDVSTFFCDIISPDSEGELGLQLEPCG-KLEDLKKRV 242
Query: 257 RKRMFSKRIVKRISFIIANGLSIELNTYALIRPT-VPGAITWLDSVTNHPLKTERSFICA 315
R + KR + R++ + GL++ + YA+ P +PG++ ++F
Sbjct: 243 RAKEQKKRAMSRLNLSLGEGLNLAVGIYAMAVPAKIPGSVKLYRETNKQVHSKPQTFDTQ 302
Query: 316 DTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPST 375
L+ K+ Q Y + I E+ IK+ L L GFKP+ LK +H++RP+
Sbjct: 303 TGRLLLPSEIKKAQVYGKKQIVMERDEVDSIKKFEDPGLYLIGFKPIKMLKIHHHIRPAV 362
Query: 376 FVFPSDKEVVGSTCIFIALHRSMLRLNRFAV--AFYGNPSNPRLVALVAQDEIVRAGG-Q 432
F++P + V GS+C+F AL + FA+ PR ALV Q E + G Q
Sbjct: 363 FIYPEENMVKGSSCLFSALLTKCSEKDVFALCRCIIRRNCPPRFAALVPQKEELDEGKVQ 422
Query: 433 VEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFAN 492
+ PG H+IYLPY+DDIR + D P AS V K ++ ++ K + F N
Sbjct: 423 ITAPGFHLIYLPYADDIRTL-----DPPQFPSASQIPVDKMKQIVSKLRFK-YRSDAFEN 476
Query: 493 PSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEG 551
P++Q+H+ L+ALAL+ +++D +P + + R G + EEFK VY NY+ E
Sbjct: 477 PAIQKHFRNLEALALDMMAPEDVEDLIMPKVDQINQRLGPL--AEEFKDLVYPANYNPES 534
Query: 552 DVKVSEASRKRKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-R 609
S E A+ E + + G L ++TV LK TTG +
Sbjct: 535 KPTTKRKSADNGGGDEKKARVEVSEEELRAHVQNGTLGKLTVPVLKEACKKLGFRTTGTK 594
Query: 610 KETLISRILTHMG 622
K+ LI ++ MG
Sbjct: 595 KQELIDALVAQMG 607
>gi|340504921|gb|EGR31314.1| ku p70 DNA helicase, putative [Ichthyophthirius multifiliis]
Length = 542
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 274/545 (50%), Gaps = 42/545 (7%)
Query: 1 MELDPDDVFRDDDEESDN---EFYQEHEAT-------KEYVVYLVDASPKMFSTTCPAED 50
ME D D++ ++ E D+ + E +A K+ V++ VD +P++F +
Sbjct: 1 MEFDDDNIENEEQELGDDFDALYIDEDDAAVPDLLSKKDCVIFAVDCNPQIFQKQ--EGN 58
Query: 51 QTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQL 110
+E+ F+ + I K++II + D+V++ F+N K NL N + L
Sbjct: 59 PNNESQFNTVLKSIQSFFKSKIILNVDDKVSLIFYNVDKTSNLLSFNGINTV-----YPL 113
Query: 111 DRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRI 170
+ P+A+ IK+ ++++FE++ G + +++ LY LW+ + + K RI
Sbjct: 114 ESPSAQMIKDVLKLDQNFEQQFGFR------NQKVKLYEVLWLCNHMFQSKDRKRNTMRI 167
Query: 171 LLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADM 230
LFTN+D+P + + +AK ++ IEL PL ++F + FY ++
Sbjct: 168 FLFTNDDNP-------PPLQERQQCIHQAKLLAEMDAQIELFPLPNAHQKFDLRKFYTEI 220
Query: 231 IGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYA---LI 287
I L+ D++ + + +K+ D++++LR++ + KR + R+ I + Y +
Sbjct: 221 IALDVDEINESLIDSSEKILDLQNRLRQKEYKKRPINRLLLYIGKDSIVGTKVYCPYIKV 280
Query: 288 RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQP--YKGENIKFSVQELSE 345
R P ++D +N LK IC++TG ++ P + Q GE ++ S +++ +
Sbjct: 281 RKPFP---KYIDQASNKLLKKTTKNICSETGQILY-PNQISQCIILGGEKVRISSKDVQK 336
Query: 346 IKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFA 405
+K + L GFKPLS LK YHN RPS FV+P D +V GS+ F AL M N+ A
Sbjct: 337 MKHFQEPSMTLIGFKPLSQLKVYHNYRPSYFVYPDDFQVKGSSQFFHALITQMKAKNKIA 396
Query: 406 VAFY--GNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVP 463
+ + S R AL+ Q+E +PPG ++I LPYSDD+R + ++ + V
Sbjct: 397 IVRFQPKRGSQVRFCALLPQEEAYDEDHVQQPPGFYLISLPYSDDMRDLTKVVQHEEKV- 455
Query: 464 RASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDE 523
+++ + A + +++ +F V F +P LQ+ YA LQA AL E E +D PDE
Sbjct: 456 EVNNNLINCAKMICNALEIHNFDVRNFEDPGLQKFYAHLQAHALNEISPEETQDLITPDE 515
Query: 524 EGMAR 528
EGM +
Sbjct: 516 EGMKK 520
>gi|440801849|gb|ELR22853.1| ATPdependent DNA helicase ii, 70 kDa subunit (ku70) superfamily
protein [Acanthamoeba castellanii str. Neff]
Length = 645
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 260/543 (47%), Gaps = 73/543 (13%)
Query: 54 ETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRP 113
E FH AV C +L +II+ D V +CF+ T KK N D ++V ++LD P
Sbjct: 13 EMPFHNAVKCAIATLTDKIISSENDLVGVCFYGTEKKNNPNDFEGIYVL-----QELDVP 67
Query: 114 TARFIKEFD------HIEESFEKEIGSQYGIVS-GSRENSLYNALWVAQGLLRKGSSKTA 166
A+ I + + H S +G + S + +ALW + + K
Sbjct: 68 DAQRIMDLEGLLPAGHPIGSLTLAVGDDFTPFGHCSADFPFCDALWTCSTMFSNCAVKVG 127
Query: 167 DKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHF 226
KRI LFTNEDDP AA ++ + QRAK+ IS+
Sbjct: 128 HKRIFLFTNEDDP-----NAANKNLREQSFQRAKNI----ISVS---------------- 162
Query: 227 YADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSI------- 279
E +D A K E+++ ++R++ F KR + R+S + + I
Sbjct: 163 -------EDEDTGTINFDASSKFEELRARVRRKEFKKRAINRLSLLFGEDVEISRRGGEA 215
Query: 280 ELNTYA-LIRPTVPG------AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQ-PY 331
E + A ++ P P A T HPL + A G L+ + ++ P+
Sbjct: 216 EFDVVAEILDPAHPCRCMRDPAKTPASQYVLHPLLKVAAAAAAAAGTLLMDSQIKYAFPF 275
Query: 332 KGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIF 391
G + F +E ++K LRL GFKP S +K + NL S+F++P +++V GST F
Sbjct: 276 GGAKVVFDKEEALQVKSFDKKALRLVGFKPRSAVKPHLNLSHSSFIYPDEQQVQGSTVAF 335
Query: 392 IALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDD 448
AL +L ++ + + +N PR VALV Q+E V G QV PPG H++ LP+SDD
Sbjct: 336 AALLDRLLASDKVGICLWTRRTNTPPRFVALVPQEEEVDDDGLQVNPPGFHLVPLPFSDD 395
Query: 449 IRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALE 508
IR E+H T+ P S ++V KA L+K + + +F F NPSLQRHYA LQALAL+
Sbjct: 396 IR---EIH--TEPQPPVSPEQVIKAKKLVKALRI-NFDSRSFENPSLQRHYANLQALALD 449
Query: 509 EDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEAS---RKRKAA 565
D + E D +PD EGM + +FK +V+ +Y+E K ++S RKR+ +
Sbjct: 450 RDTVEETPDYLLPDTEGME--NFAALINDFKDAVFPSDYEELRATKGKKSSGSKRKREPS 507
Query: 566 TEN 568
+N
Sbjct: 508 DDN 510
>gi|4630797|dbj|BAA76953.1| human Ku70 autoantigen homologue [Xenopus laevis]
Length = 611
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 177/609 (29%), Positives = 297/609 (48%), Gaps = 41/609 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + + T F + + CI ++II+ +D +++ FF
Sbjct: 32 SGRDSLIFLVDASKPMFESI-----DGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFF 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
TR+ N + V + LD P A+ I + D +E EK + +
Sbjct: 87 GTRESTNCDPFKHLCVLH-----DLDTPGAKRILDLDKYKE--EKGRALFCDTIGCGGDF 139
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL ALW+ L K + KRI+LFTNED+P A + +A+D +D+
Sbjct: 140 SLGEALWLCSNLFSNVKVKMSHKRIILFTNEDNPH-----ANDPAKAKQARAKAEDLKDM 194
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRI 265
GI ++L+ L P F +S FY D++ D+ + A +KL+D+ ++R + KR
Sbjct: 195 GIFLDLMHLEKPGG-FDISLFYRDIVNTAEDEDLVVQFKASEKLDDLLKKVRAKEARKRA 253
Query: 266 VKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QEP 324
+ R++ + + + + Y L++ V L +N P+KT+ ++TG+L+
Sbjct: 254 LSRLNLKLGPDVGLTVGVYNLVQKAVKPPTVRLYRESNEPVKTKTRIFHSNTGSLLLPSD 313
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
KR Q Y I E ++KR L L GFKP+S LK +H RP+ F++P + +
Sbjct: 314 TKRSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFIYPEESII 373
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGMHMI 441
GST +F AL L A+ Y N PR VALV QD E+ Q P G +++
Sbjct: 374 TGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVALVPQDEELDDQNMQSAPSGFNLV 433
Query: 442 YLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAV 501
LP++DDIR + DT A++++V K ++ ++ +F F NP LQ+H+
Sbjct: 434 CLPFADDIRKL-----DTPEKITANEEQVDKMKEIVHKLRF-NFRSDSFENPVLQQHFRN 487
Query: 502 LQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRK 561
L+ALAL+ + I+D T+P E + R + EEFK VY Y+ EG RK
Sbjct: 488 LEALALDMLEPEPIEDLTLPKVEMIDR-RIGSLAEEFKELVYPPGYNPEGKA----VKRK 542
Query: 562 RKAATENAAKECANYDWADLADK-------GKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
+ ++++ ++ A D + D+ G L ++TV LK + L + +K+ L+
Sbjct: 543 QGGSSDSRVEKKAKADVSISEDELRTYVKNGTLGKLTVPALKEACRGYKLKGS-KKQELV 601
Query: 615 SRILTHMGK 623
++ + K
Sbjct: 602 DALVEYFKK 610
>gi|148228066|ref|NP_001082274.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Xenopus laevis]
gi|50604152|gb|AAH77445.1| LOC398357 protein [Xenopus laevis]
Length = 611
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 177/609 (29%), Positives = 297/609 (48%), Gaps = 41/609 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + + T F + + CI ++II+ +D +++ FF
Sbjct: 32 SGRDSLIFLVDASKPMFESI-----DGELTPFDLTLQCIRSVYASKIISSDHDLLSVVFF 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
TR+ N + V + LD P A+ I + D +E EK + +
Sbjct: 87 GTRESTNCDPFKHLCVLH-----DLDTPGAKRILDLDKYKE--EKGRALFCDTIGCGGDF 139
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL ALW+ L K + KRI+LFTNED+P A + +A+D +D+
Sbjct: 140 SLGEALWLCSNLFSNVKVKMSHKRIMLFTNEDNPH-----ANDPAKAKQARAKAEDLKDM 194
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRI 265
GI ++L+ L P F +S FY D++ D+ + A +KL+D+ ++R + KR
Sbjct: 195 GIFLDLMHLEKPGG-FDISLFYRDIVNTAEDEDLVVQFKASEKLDDLLKKVRAKEAKKRA 253
Query: 266 VKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QEP 324
+ R++ + + + + Y L++ V L +N P+KT+ ++TG+L+
Sbjct: 254 LSRLNLKLGPDVGLTVGVYNLVQKAVKPPTVRLYRESNEPVKTKTRIFHSNTGSLLLPSD 313
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
KR Q Y I E ++KR L L GFKP+S LK +H RP+ F++P + +
Sbjct: 314 TKRSQTYGNRQIVLEKDETEQLKRFDEPGLVLIGFKPISCLKKHHFTRPAQFIYPEESII 373
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGMHMI 441
GST +F AL L A+ Y N PR VALV QD E+ Q P G +++
Sbjct: 374 TGSTTLFNALLTRCLARQVMAICRYTPRRNTPPRFVALVPQDEELDDQNMQSAPSGFNLV 433
Query: 442 YLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAV 501
LP++DDIR + DT A++++V K ++ ++ +F F NP LQ+H+
Sbjct: 434 CLPFADDIRKL-----DTPEKITANEEQVDKMKEIVHKLRF-NFRSDSFENPVLQQHFRN 487
Query: 502 LQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRK 561
L+ALAL+ + I+D T+P E + R + EEFK VY Y+ EG RK
Sbjct: 488 LEALALDMLEPEPIEDLTLPKVEMIDR-RIGSLAEEFKELVYPPGYNPEGKA----VKRK 542
Query: 562 RKAATENAAKECANYDWADLADK-------GKLKEMTVQELKLYLMAHNLSTTGRKETLI 614
+ ++++ ++ A D + D+ G L ++TV LK + L + +K+ L+
Sbjct: 543 QGGSSDSRVEKKAKADVSISEDELRTYVKNGTLGKLTVPALKEACRGYKLKGS-KKQELV 601
Query: 615 SRILTHMGK 623
++ + K
Sbjct: 602 DALVEYFKK 610
>gi|298707354|emb|CBJ29998.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 540
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/573 (28%), Positives = 274/573 (47%), Gaps = 64/573 (11%)
Query: 68 LKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEES 127
+K++++ V + FF T+K +++ L E S
Sbjct: 1 MKSKVVQSDKHLVGVTFFGTKKTSDIEALA-------------------------KGEVS 35
Query: 128 FEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAA 187
FE ++YG + L + LW Q KRI LFTN+DDP ++G A
Sbjct: 36 FE----NKYGSIGAGDPCPLKSGLWSCQTEFNTIKQPLDHKRIFLFTNDDDP---LRGDA 88
Query: 188 KNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDL-ALFMPSAG 246
+ T+ A+DA + I I+L + F FY ++ +GDD +
Sbjct: 89 EE--TKKVHMIAQDAVNASIEIQLFHIKRKGAPFNPDTFYRAIVTGDGDDYNEQSLGDGA 146
Query: 247 QKLEDMKDQLRKRMFSKRIVKRISFII-----ANGLSIELNTYALIRPTVPGAITWLDSV 301
+ ++ D++R++ F KR + R+ F + G+S ++ + ++ P LD+
Sbjct: 147 ESTNELVDKVRRKEFKKRRLARMPFYLREGPEGTGVSFDVQVFNMVHPAKRPTPIHLDAR 206
Query: 302 TNHPLKTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
TN P++ + TGA L + + + GE S E+ +K + L L GF+
Sbjct: 207 TNKPVQIISKLMDDKTGAQLDAHEVRTYLEFAGERAYISKDEMGTLKGLYPKGLTLLGFR 266
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLV 418
P + L+ N+R F++P ++ GS FIALH +M+ +A+A + + PR+V
Sbjct: 267 PNNTLRPDFNIRSPYFLYPDEESTTGSAKAFIALHAAMVDKRVYALARFTRAAGAAPRMV 326
Query: 419 ALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELH-SDTDAVPRASDDEVKKAAALM 477
AL Q+E+V G Q++P G + + LP++D++R + SD D ++ V A ++
Sbjct: 327 ALRPQEEVVEDGEQLQPGGFNTVVLPFADEVREAKAPQTSDGDVKAEVNEGGVSAAEGVV 386
Query: 478 KRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDM---PEIKDETVPDEEGMARPGVVKA 534
K + L+ F +F NP LQRHYA LQALAL E+++ PE D T PDE+G+ G
Sbjct: 387 KALKLESFDFRKFENPVLQRHYAALQALALSEEEISWDPEKDDRTRPDEKGLDAAG-GPV 445
Query: 535 VEEFKLSVYGDNYDEEGDVKVSEASR----------KRKAATENAAKECANYDWADLADK 584
+EEFK+S G D+E DV + A R ++A TE+ + + +W + K
Sbjct: 446 LEEFKVSYGG---DQEDDVPAAGAKRSAGGSGEGSGAKRAKTED---DASKINWQEELAK 499
Query: 585 GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G++ TV LK +L +S TG+K L++R+
Sbjct: 500 GQIDRFTVPTLKSFLKTRGMSATGKKGDLVARV 532
>gi|410965715|ref|XP_003989387.1| PREDICTED: X-ray repair cross-complementing protein 6 [Felis catus]
Length = 608
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 304/612 (49%), Gaps = 49/612 (8%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVD S MF + + + + T F +++ CI +II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDGSKAMFES----QSEVELTPFDMSIQCIQSVYTNKIISSNQDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSR 143
T K KN + ++V ++LD P A+ + E D F+ E G ++ ++
Sbjct: 87 GTEKDKNSVNFKNIYVL-----QELDNPGAKRVLELDQ----FKGEQGKKHFQDLIGHGS 137
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK--D 201
+ SL LWV L K + KRI+LFTNEDDP G ND R + R K D
Sbjct: 138 DYSLSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHG-------NDSARASRARTKAGD 190
Query: 202 AQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALFMPSAGQKLEDMKDQLRKRM 260
+D GI ++L+ L P F +S FY D+I + D DL + + KLED+ ++R +
Sbjct: 191 LRDTGIFLDLMHLKKPGG-FDISLFYRDIISIADDEDLGVHFEESS-KLEDLLRKVRAKE 248
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL 320
KR++ + ++ +++ + Y L++ L TN P+KT+ +TG+L
Sbjct: 249 TKKRMLSSLKLKLSKDIALTVGIYNLVQKAYRPPPVRLYRETNEPVKTKTRTFNVNTGSL 308
Query: 321 M-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
+ KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P
Sbjct: 309 LLPSDTKRSQIYGNRQIVLEKEETEELKRFDEPGLILIGFKPLIMLKKHHYLRPSLFVYP 368
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPP 436
+ V GS+ +F AL L AV Y N P V L+ Q +E+ QV PP
Sbjct: 369 EESLVNGSSTLFSALLTKCLEKEVMAVCRYTPRRNTPPYFVVLLPQEEELDDQKIQVTPP 428
Query: 437 GMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQ 496
G +++LPY+DD R V T+ V A+ +++ K A+++++ ++ F NP LQ
Sbjct: 429 GFQLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIVQKLRF-NYRSDAFENPVLQ 482
Query: 497 RHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV-- 553
+H+ L+ALAL+ + + D T+P + + R G + V+EFK VY +Y+ E +V
Sbjct: 483 QHFRNLEALALDLMEPEQAVDLTLPKTKAIDKRLGPL--VDEFKELVYPPDYNPEENVSK 540
Query: 554 --KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
+ E S ++ E + +E + KG L ++TV LK + L +K+
Sbjct: 541 RKQDDEGSGSKRPKVELSEEELKAH-----VSKGTLGKLTVPMLKEVCRVYGLKGGLKKQ 595
Query: 612 TLISRILTHMGK 623
L++ + H K
Sbjct: 596 ELMNMLTEHFQK 607
>gi|348502389|ref|XP_003438750.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
1 [Oreochromis niloticus]
Length = 610
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 302/588 (51%), Gaps = 57/588 (9%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +V+LVDAS +MF ED + ++F + + + ++II+ D VA+ F+ T
Sbjct: 32 RDSLVFLVDASKEMF---IKGED-GEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGT 87
Query: 88 RKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS-GSREN 145
+ KN ++ V+V++ L P A+ ++E D + E G++ + GS E
Sbjct: 88 EESKNPRNSFKHVYVYH-----DLSEPGAKRVQEVD----ALRGEKGAKLAAETIGSGET 138
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL +ALW L + + KR+++FT D+P G + K+ RT +A D ++
Sbjct: 139 SLGDALWCCANLYSDIKLRLSHKRLMIFTCRDEPHGG--DSVKDRQART---KASDLKET 193
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL---FMPSAGQKLEDMKDQLRKRMFS 262
G+ I+L+ L P F +S F+ D++ D+ L PS KLED+ ++R +
Sbjct: 194 GVVIDLMHLMKPGG-FDISLFFCDIVSPPEDESELGLQLQPS--DKLEDLLKRVRAKELK 250
Query: 263 KRIVKRISFIIANGLSIELNTYAL-IRPTVPGAITWLDSVTNHPLKTE-RSFICADTGAL 320
KR + R++ + G+++ + YA + PG+I L TN P++++ R+F L
Sbjct: 251 KRALARLNLCLGEGINVAVGIYATAVAARKPGSIK-LYRETNEPVRSKTRTFHTQTGSLL 309
Query: 321 MQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPS 380
+ K+ Q Y G+ I E+ IK+ L L GFKP+ LK +H++RP+ F++P
Sbjct: 310 LPSEIKKAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRPAVFLYPE 369
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPG 437
+ EV GS+C+F AL + N FA+ + + N PR VAL+ Q+E + G Q+ PPG
Sbjct: 370 EDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGKVQITPPG 429
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQR 497
++IYLP++DD R + D P AS +V K ++ ++ K + F NP +Q+
Sbjct: 430 FNVIYLPFADDFRTL-----DPPQFPSASQTQVDKMKEIVSKLRFK-YRSEGFENPVIQQ 483
Query: 498 HYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVS 556
H+ L+ALAL+ EI+D +P + + R G + V+EFK VY Y+ E S
Sbjct: 484 HFRNLEALALDMMAPEEIEDLIMPKVDQIDQRLGPL--VQEFKDLVYPAYYNPE-----S 536
Query: 557 EASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNL 604
+ + KRK A D A+K E+T ELK ++ + L
Sbjct: 537 KPAAKRKTA-----------DTGGGAEKKPKVELTEDELKAHVQNNTL 573
>gi|348502391|ref|XP_003438751.1| PREDICTED: X-ray repair cross-complementing protein 5-like isoform
2 [Oreochromis niloticus]
Length = 612
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 311/611 (50%), Gaps = 51/611 (8%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +V+LVDAS +MF ED + ++F + + + ++II+ D VA+ F+ T
Sbjct: 34 RDSLVFLVDASKEMF---IKGED-GEPSNFDMTMQVVRTVYTSKIISSDKDLVALVFYGT 89
Query: 88 RKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS-GSREN 145
+ KN ++ V+V++ L P A+ ++E D + E G++ + GS E
Sbjct: 90 EESKNPRNSFKHVYVYH-----DLSEPGAKRVQEVD----ALRGEKGAKLAAETIGSGET 140
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL +ALW L + + KR+++FT D+P G + K+ RT +A D ++
Sbjct: 141 SLGDALWCCANLYSDIKLRLSHKRLMIFTCRDEPHGG--DSVKDRQART---KASDLKET 195
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDDLAL---FMPSAGQKLEDMKDQLRKRMFS 262
G+ I+L+ L P F +S F+ D++ D+ L PS KLED+ ++R +
Sbjct: 196 GVVIDLMHLMKPGG-FDISLFFCDIVSPPEDESELGLQLQPS--DKLEDLLKRVRAKELK 252
Query: 263 KRIVKRISFIIANGLSIELNTYAL-IRPTVPGAITWLDSVTNHPLKTERSFICADTGALM 321
KR + R++ + G+++ + YA + PG+I L TN P++++ TG+L+
Sbjct: 253 KRALARLNLCLGEGINVAVGIYATAVAARKPGSIK-LYRETNEPVRSKTRTFHTQTGSLL 311
Query: 322 -QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPS 380
K+ Q Y G+ I E+ IK+ L L GFKP+ LK +H++RP+ F++P
Sbjct: 312 LPSEIKKAQYYGGKEIVMERDEVDAIKKFDDPGLFLIGFKPMEKLKLHHHIRPAVFLYPE 371
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPG 437
+ EV GS+C+F AL + N FA+ + + N PR VAL+ Q+E + G Q+ PPG
Sbjct: 372 EDEVKGSSCLFSALLKKCSERNVFALCRFISRRNYPPRFVALLPQNEELDEGKVQITPPG 431
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQR 497
++IYLP++DD R + D P AS +V K ++ ++ K + F NP +Q+
Sbjct: 432 FNVIYLPFADDFRTL-----DPPQFPSASQTQVDKMKEIVSKLRFK-YRSEGFENPVIQQ 485
Query: 498 HYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVS 556
H+ L+ALAL+ EI+D +P + + R G + V+EFK VY Y+ E
Sbjct: 486 HFRNLEALALDMMAPEEIEDLIMPKVDQIDQRLGPL--VQEFKDLVYPAYYNPES----K 539
Query: 557 EASRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RK 610
A++++ A T A+ E + L ++TV LK + TTG +K
Sbjct: 540 PAAKRKTADTGGGAEKKPKVELTEDELKAHVQNNTLVKLTVPVLKDACKQFGVRTTGTKK 599
Query: 611 ETLISRILTHM 621
+ LI ++ +
Sbjct: 600 QELIDALIARL 610
>gi|402884375|ref|XP_003905661.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 2
[Papio anubis]
Length = 559
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 282/569 (49%), Gaps = 37/569 (6%)
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
CI ++II+ D +A+ F+ T K KN + ++V ++LD P A+ I E D
Sbjct: 16 CIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVL-----QELDNPGAKRILELD 70
Query: 123 HIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F+ + G + ++ + SL LWV L K + KRI+LFTNED+P
Sbjct: 71 Q----FKGQQGQKRFQDLMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH 126
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLA 239
G+ +AK RT +A D +D GI ++L+ L P F +S FY D+I + E DDL
Sbjct: 127 GN--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDDDLR 180
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
+ + KLED+ ++R + KR + R+ + + I + Y L++ + L
Sbjct: 181 VHFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGVYNLVQKALKPPPIKLY 239
Query: 300 SVTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
TN P+KT+ R+F + G L+ KR Q Y I +E E+KR L L G
Sbjct: 240 RETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMG 299
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPL LK +H LRPS FV+P + V+GS+ +F AL L A+ Y N P
Sbjct: 300 FKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPY 359
Query: 417 LVALVAQD-EIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
VALV QD E+ QV PPG +++LP++DD R + T+ + A+ ++V K A
Sbjct: 360 FVALVPQDEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTEKI-MATPEQVDKMKA 414
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAV 535
+++++ + F NP LQ+H+ L+ALAL+ + + D T+P E M + + V
Sbjct: 415 IVEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNK-RLGSLV 472
Query: 536 EEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLA---DKGKLKEMTV 592
+EFK VY +Y+ EG V RK + + Y +L KG L + TV
Sbjct: 473 DEFKELVYPPDYNPEGKV----TKRKHDNDGSGSKRPKVEYSEEELKTHISKGTLGKFTV 528
Query: 593 QELKLYLMAHNLSTTGRKETLISRILTHM 621
LK A+ L + +K+ L+ + H
Sbjct: 529 PMLKEACRAYGLKSGLKKQELLEALTKHF 557
>gi|317419163|emb|CBN81200.1| ATP-dependent DNA helicase 2 subunit 1 [Dicentrarchus labrax]
Length = 624
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 302/611 (49%), Gaps = 49/611 (8%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +V+LVDAS +MF ED + ++F + + + ++II+ D VA+ F+ T
Sbjct: 46 RDSLVFLVDASKEMF---IKGED-GEPSNFDMTMQVVRSVYTSKIISSHRDLVALVFYGT 101
Query: 88 RKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS-GSREN 145
+ KN ++ V+V++ LD P A+ ++E D + E G++ + GS E
Sbjct: 102 EQSKNPRNSFKYVYVYH-----DLDEPGAKRVQEVD----ALRGEKGARLAAETMGSGET 152
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL +ALW L + + KR+++FT D+P +AK+ RT +A D ++
Sbjct: 153 SLGDALWCCANLYSDIKLRLSHKRLMIFTCRDEPHRG--DSAKDRQART---KASDLKET 207
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDD--LALFMPSAGQKLEDMKDQLRKRMFSK 263
G+ I+L+ L P F V+ F+ D++ D+ L L + KLED++ ++R + K
Sbjct: 208 GVIIDLMHLMKPGG-FDVAPFFRDIVSQPEDESELGLHLEPC-DKLEDLQKRVRAKEQKK 265
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R++ + G+++ + YA A L TN P++++ R+F L+
Sbjct: 266 RAMARLNLCLGEGINVAVGIYATAVTARKPAAIRLYRETNEPVRSKTRTFHMQTGSLLLP 325
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
K+ Q Y + I E+ IK+ L L GFKP+ LK +H++RP+ F++P +
Sbjct: 326 SEIKKAQTYGKKQIVMERDEVDSIKKFQDPGLYLIGFKPMEKLKTHHHIRPAVFLYPEEG 385
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMH 439
EV GS C+F AL N FA+ + N PR VALV Q E V G Q PPG +
Sbjct: 386 EVKGSACLFSALLMKCSERNVFALCRCVSRRNYPPRFVALVPQREEVDEGKVQFTPPGFN 445
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+IYLPY+DD+R + D P AS +V K ++ ++ K + F NP +Q+HY
Sbjct: 446 VIYLPYADDLRTL-----DPPQCPSASQIQVDKMKEIVSKLRFK-YRSEAFENPVIQQHY 499
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGMA-RPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
L+ALAL+ + +D +P + + R G + EEFK VY Y+ E S++
Sbjct: 500 RNLEALALDMMAPEDTEDLIMPKVDQINHRLGPL--AEEFKDLVYPAGYNPE-----SKS 552
Query: 559 SRKRKAAT------ENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKE 611
KRK A + E + G L ++TV LK + TTG +K+
Sbjct: 553 VAKRKTAIVGGVAEKKPKAEVPEDELRAHVQNGTLGKLTVPVLKEACKQFGVRTTGTKKQ 612
Query: 612 TLISRILTHMG 622
LI + T +
Sbjct: 613 ELIDALTTRLA 623
>gi|6225597|sp|Q26228.1|KU70_RHIAP RecName: Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
Full=ATP-dependent DNA helicase II 70 kDa subunit;
AltName: Full=ATP-dependent DNA helicase II subunit
Ku70; AltName: Full=Ku autoantigen protein p70 homolog
gi|1063592|gb|AAC41612.1| ku autoantigen p70 homologue [Rhipicephalus appendiculatus]
gi|1587652|prf||2207188A DNA helicase II:SUBUNIT=70kD
Length = 600
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 174/603 (28%), Positives = 290/603 (48%), Gaps = 45/603 (7%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKK 90
+++L+DA+ MF E+ +T F + ++ +I + D V I F T K
Sbjct: 29 ILFLIDATEGMF------EEVDGDTAFMQCIKAAKSTMLNKITSSPKDLVGIILFGTDKD 82
Query: 91 KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNA 150
N V+V + L+ P A + + + + K+ +YG ++ +
Sbjct: 83 NNPNRFKNVYVL-----QDLESPGAESVLKLEKLIADGPKKFKQEYG----HGNVNMADV 133
Query: 151 LWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIE 210
LW + K S+ +R+L+ TN+DDP KG+ D+ + +AKD GI ++
Sbjct: 134 LWTCALMFSK--SRAGQRRVLVLTNQDDPH---KGSG--DLDDKAVVKAKDLLQSGIELD 186
Query: 211 LLPLSPP-DEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRI 269
L+ L PP D++F+ Y +++ + ++ P A K+E++ ++R + KR + +
Sbjct: 187 LVHLKPPGDKKFRPQILYKNLV-TDKENYEDGFPEASDKMEELLLRVRMKDHKKRRLMSL 245
Query: 270 SFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPAKRF 328
F + + + ++ Y L+RPT A T L N L + R D+ ALM +
Sbjct: 246 PFWLGPEVKMSVSLYNLVRPTGKPATTRLARDNNEELLSRRITYAMDSAEALMPGDISKT 305
Query: 329 QPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGST 388
Q Y G F + E+ +IK ++ L+L GFKPLSYL+ ++RPS FV+P + V GST
Sbjct: 306 QEYGGRKAYFDICEVKQIKSMAPPGLQLLGFKPLSYLEKQPHVRPSHFVYPDEGSVRGST 365
Query: 389 CIFIALHRSMLRLNRFAVAFYGN--PSNPRLVALVAQDEIVRAGG-QVEPPGMHMIYLPY 445
+F AL +S LR + F+ + P+LV L+AQ+E G Q+ PPG H++ LP+
Sbjct: 366 RLFAALLQSCLRHRVAPICFWISRAAQAPKLVYLLAQEEERDPHGLQMVPPGFHVVQLPF 425
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
SDD R ++ L T +A+ V A + +++ + +F NP LQ ++ L+AL
Sbjct: 426 SDDRRRLQALQEGTT---KATPGLVALAREMAEKLRFT-YHPDKFENPELQGFWSCLEAL 481
Query: 506 ALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
AL+ DD KD T PD E M KA EE + + + +G + SRKR A
Sbjct: 482 ALDRDDAEHPKDYTRPDHEKMK----AKAGEE--MDAFLEAAFPDGCSATTAGSRKRTQA 535
Query: 566 TENAA-------KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
E + +N D + A +GKL +TV L+ + L +K ++ I
Sbjct: 536 GEGGQAKKARSENQGSNVDVREEAKRGKLASLTVSVLRDFCKQEGLRCPSKKAEIVDCIK 595
Query: 619 THM 621
H+
Sbjct: 596 KHL 598
>gi|109094368|ref|XP_001105684.1| PREDICTED: x-ray repair cross-complementing protein 6 [Macaca
mulatta]
Length = 559
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 283/570 (49%), Gaps = 39/570 (6%)
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
CI ++II+ D +A+ F+ T K KN + ++V ++LD P A+ I E D
Sbjct: 16 CIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVL-----QELDNPGAKRILELD 70
Query: 123 HIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F+ + G + ++ + SL LWV L K + KRI+LFTNED+P
Sbjct: 71 Q----FKGQQGQKRFQDLMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH 126
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLA 239
G+ +AK RT +A D +D GI ++L+ L P F +S FY D+I + E +DL
Sbjct: 127 GN--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLR 180
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
+ + KLED+ ++R + KR + R+ + + I + Y L++ + L
Sbjct: 181 VHFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGVYNLVQKALKPPPIKLY 239
Query: 300 SVTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
TN P+KT+ R+F + G L+ KR Q Y I +E E+KR L L G
Sbjct: 240 RETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMG 299
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPL LK +H LRPS FV+P + V+GS+ +F AL L A+ Y N P
Sbjct: 300 FKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPY 359
Query: 417 LVALVAQD-EIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
VALV QD E+ QV PPG +++LP++DD R + T+ + A+ ++V K A
Sbjct: 360 FVALVPQDEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTEKI-MATPEQVDKMKA 414
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKA 534
+++++ + F NP LQ+H+ L+ALAL+ + + D T+P E M R G +
Sbjct: 415 IVEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL-- 471
Query: 535 VEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLA---DKGKLKEMT 591
V+EFK VY +Y+ EG V RK + + Y +L KG L + T
Sbjct: 472 VDEFKELVYPPDYNPEGKV----TKRKHDNDGSGSKRPKVEYSEEELKTHISKGTLGKFT 527
Query: 592 VQELKLYLMAHNLSTTGRKETLISRILTHM 621
V LK A+ L + +K+ L+ + H
Sbjct: 528 VPMLKEACRAYGLKSGLKKQELLEALTKHF 557
>gi|194373695|dbj|BAG56943.1| unnamed protein product [Homo sapiens]
Length = 559
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 286/570 (50%), Gaps = 39/570 (6%)
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
CI ++II+ D +A+ F+ T K KN + ++V ++LD P A+ I E D
Sbjct: 16 CIQSVYISKIISSDLDLLAVVFYGTEKDKNSVNFKNIYVL-----QELDNPGAKRILELD 70
Query: 123 HIE-ESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFG 181
+ + +K G GS + SL LWV L K + KRI+LFTNED+P G
Sbjct: 71 QFKGQQGQKRFQDMMG--HGS-DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHG 127
Query: 182 SIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLAL 240
+ +AK RT +A D +D GI ++L+ L P F +S FY D+I + E +DL +
Sbjct: 128 N--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRV 181
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
+ KLED+ ++R + KR + R+ + + I + Y L++ + L
Sbjct: 182 HFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYR 240
Query: 301 VTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
TN P+KT+ R+F + G L+ KR Q Y I +E E+KR L L GF
Sbjct: 241 ETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGF 300
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRL 417
KPL LK +H LRPS FV+P + V+GS+ +F AL L A+ Y N P
Sbjct: 301 KPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYF 360
Query: 418 VALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAAL 476
VALV Q +E+ QV PPG +++LP++DD R + T+ + A+ ++V K A+
Sbjct: 361 VALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAI 415
Query: 477 MKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAV 535
++++ + F NP LQ+H+ L+ALAL+ + + D T+P E M R G + V
Sbjct: 416 VEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--V 472
Query: 536 EEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANYDWADLADKGKLKEMT 591
+EFK VY +Y+ EG V +E S ++ E + +E + KG L + T
Sbjct: 473 DEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFT 527
Query: 592 VQELKLYLMAHNLSTTGRKETLISRILTHM 621
V LK A+ L + +K+ L+ + H
Sbjct: 528 VPMLKEACRAYGLKSGLKKQELLEALTKHF 557
>gi|395819672|ref|XP_003783204.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 2
[Otolemur garnettii]
Length = 559
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 286/574 (49%), Gaps = 43/574 (7%)
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
CI ++II+ D +A+ F+ T+K+KN + ++V ++LD P A+ I E D
Sbjct: 15 CIQSVYISKIISSDRDLLAVVFYGTKKEKNSVNFKNIYVL-----QELDNPGAKRILELD 69
Query: 123 HIEESFEKEIGSQY--GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F+ + G ++ ++ + SL LWV L K + KRI+LFTN+D+P
Sbjct: 70 Q----FKGQQGKKHFQDLIGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNDDNPH 125
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLA 239
G +AK RT +A D ++ GI ++L+ L P + +S FY D+I + E +DL
Sbjct: 126 GD--DSAKASRART---KAGDLRETGIFLDLMHLKKPGG-YDISLFYRDIISIAEDEDLG 179
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
+ + +LED+ ++R + KR++ + F ++ +++ L Y L++ V A L
Sbjct: 180 VHFEESS-RLEDLLRKVRAKENKKRVLFSLKFKLSKDIALTLGVYNLVQKAVKPAPIRLY 238
Query: 300 SVTNHPLKTERSFICADTGALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
TN P+KT+ +TG+L+ KR Q Y I +E E+KR L L G
Sbjct: 239 RETNEPVKTKTRTFNVNTGSLLLPSDTKRSQMYGSRQIVLEKEETEELKRFDEPGLILIG 298
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPL LK +H LRPS FV+P + V GS+ +F AL L AV Y N P
Sbjct: 299 FKPLEMLKKHHYLRPSLFVYPEESLVNGSSTLFSALLTKCLEKEVLAVCRYTPRKNIPPY 358
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
VALV Q+E + QV P G +++LPY+DD R V T A+ ++V K A
Sbjct: 359 FVALVPQEEELDGQKIQVTPSGFQLVFLPYADDKRKVPFPEKVT-----ANPEQVDKMKA 413
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKA 534
+++++ K + F NP LQ+H+ L+ALAL+ + + D T+P E M R G +
Sbjct: 414 IVQKLRFK-YRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNERLGSL-- 470
Query: 535 VEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWAD-----LADKGKLKE 589
V+EFK VY +Y+ + E K+K E + ++++ KG L +
Sbjct: 471 VDEFKELVYPPDYNPK------EKITKKKQDDEGPGSKRPKVEFSEEELKAHVSKGTLGK 524
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
TV LK A+ L +K+ L+ + H K
Sbjct: 525 FTVPMLKEACRAYGLKGGMKKQELLDTLTKHFQK 558
>gi|47226145|emb|CAG04519.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 293/608 (48%), Gaps = 50/608 (8%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +V+LVDAS MF ED ++F + + + ++II+ D VA+ F+ T
Sbjct: 7 RDSLVFLVDASKDMFVR---GED-GQPSNFDLTMQVVRSVYTSKIISSHRDLVALVFYGT 62
Query: 88 RKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENS 146
+ KN + V+V++ LD P A+ + E D ++ + + GS E S
Sbjct: 63 EQSKNPSNSFKHVYVYH-----SLDEPGAKRVLEVDSLQGDKGARLMEE---TVGSGETS 114
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
L +ALW L + + KR+++FT D P G AAK+ RT +A D ++ G
Sbjct: 115 LGDALWCCANLYSDIKLRLSFKRLMIFTCRDQPHGG--DAAKDRQART---KASDLKETG 169
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIG---LEGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
+ I+LL L P F VS F+ D+I EG+ PS KLED++ ++R + K
Sbjct: 170 VIIDLLHLMKPGG-FDVSSFFCDIISPPSSEGELGLQLEPS--DKLEDLRRRVRAKEQKK 226
Query: 264 RIVKRISFIIANGLSIELNTYALIRPT-VPGAITWLDSVTNHPLKTERSFICADTGALMQ 322
R + R++ + G+++ + Y + P VP AI R+F L+
Sbjct: 227 RALSRLNLCLGEGVNVAVGIYTVAVPARVPAAIKLYRETNKQVQSKTRTFHTQTGSLLLP 286
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
K+ Q Y G+ I E+ IK+ L+L GFKPL LK +H++ P+ F++P +
Sbjct: 287 SEVKKAQVYGGKQIVMERDEVDSIKKFEDPGLQLIGFKPLERLKIHHHIHPALFIYPEED 346
Query: 383 EVVGSTCIFIALHRSMLRLNRFA----VAFYGNPSNPRLVALVAQDEIVRAGG-QVEPPG 437
V GS+C+F AL + FA VA +P PR ALV Q E++ G Q+ PG
Sbjct: 347 MVKGSSCLFSALLTKCIEKKVFALCRCVARRNSP--PRFAALVPQREVLDEGKVQLSAPG 404
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQR 497
++++LPY+DDIR +E P AS +V K ++ ++ K + F NP +Q+
Sbjct: 405 FYLLHLPYADDIRTLE-----PQPFPSASQVQVDKMKQIVSKLRFK-YRSDAFENPVIQQ 458
Query: 498 HYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVS 556
H+ L+ALAL+ + +D +P + + R G + +EF VY Y+ E +
Sbjct: 459 HFRNLEALALDMMAPEDTEDLIMPKVDQINQRLGPL--AQEFTELVYPAGYNPE----IK 512
Query: 557 EASRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
A +++ A E A+ E + + +G L ++TV LK + TTG K+
Sbjct: 513 PAPKRKSADNEGGAEKKPKAEVSEEELRAHVQRGTLAKLTVPVLKEACKKFGVRTTGTKK 572
Query: 612 TLISRILT 619
+ LT
Sbjct: 573 QELMDALT 580
>gi|426394618|ref|XP_004063588.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 2
[Gorilla gorilla gorilla]
Length = 559
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 285/571 (49%), Gaps = 41/571 (7%)
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
CI ++II+ D +A+ F+ T K KN + ++V ++LD P A+ I E D
Sbjct: 16 CIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVL-----QELDNPGAKRILELD 70
Query: 123 HIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
F+ + G + ++ + SL LWV L K + KRI+LFTNED+P
Sbjct: 71 Q----FKGQQGQKRFQDLMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH 126
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLA 239
G+ +AK RT +A D +D GI ++L+ L P F +S FY D+I + E +DL
Sbjct: 127 GN--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLR 180
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
+ + KLED+ ++R + KR + R+ + + I + Y L++ + L
Sbjct: 181 VHFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLY 239
Query: 300 SVTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
TN P+KT+ R+F + G L+ KR Q Y I +E E+KR L L G
Sbjct: 240 RETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMG 299
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPL LK +H LRPS FV+P + V+GS+ +F AL L A+ Y N P
Sbjct: 300 FKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPY 359
Query: 417 LVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
VALV Q +E+ QV PPG +++LP++DD R + T+ + A+ ++V K A
Sbjct: 360 FVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTEKI-MATPEQVGKMKA 414
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKA 534
++ ++ + F NP LQ+H+ L+ALAL+ + + D T+P E M R G +
Sbjct: 415 IVDKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL-- 471
Query: 535 VEEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANYDWADLADKGKLKEM 590
V+EFK VY +Y+ EG V +E S ++ E + +E + KG L +
Sbjct: 472 VDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKF 526
Query: 591 TVQELKLYLMAHNLSTTGRKETLISRILTHM 621
TV LK A+ L + +K+ L+ + H
Sbjct: 527 TVPMLKEACRAYGLKSGLKKQELLEALTKHF 557
>gi|358339792|dbj|GAA29239.2| acylaminoacyl-peptidase [Clonorchis sinensis]
Length = 1249
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 176/648 (27%), Positives = 304/648 (46%), Gaps = 64/648 (9%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKT 70
DD+ E + Q + +++LVD +P M + +A+ C +
Sbjct: 629 DDELEGSDPLSQ---SATTGLIFLVDCTPTMLGL---ENAGCEPFGLRLALRCCQTVQQN 682
Query: 71 QIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK 130
+ IN +D +++ F TR+ + DL ++V + L P A I + + +++ EK
Sbjct: 683 KAINSPWDMISLVFMRTRESSS-SDLRHIYVL-----QPLTVPDAERILQLESLQKLDEK 736
Query: 131 EIGSQYGIVSGSREN--SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAK 188
E+ S++G ++ +++ L++ALW Q + S D+ I L T++ DP
Sbjct: 737 ELESRFGTIADRKDSHFGLHDALWACQNMFSSCSKTLGDRCIFLITDDPDP-----SHGM 791
Query: 189 NDMTRTTMQRAKDAQDLGISIELLPLSPPDEE---FKVSHFYADMIGLEGD------DLA 239
+ R + + D + +GI +E+LP+ P+++ F FY D++ GD D A
Sbjct: 792 TQLKRQAIIKTNDLKQMGIGLEILPIKRPEKDASDFDFDLFYQDLLS-NGDFDFFPADTA 850
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANG--LSIELNTYALIRPTVPGAITW 297
+++E + ++ R +R + RI F + G ++ ++ + L R P W
Sbjct: 851 PAHMDPAERMEQLLSRVWIRELKQRRLTRIPFHLGPGKEFALGVSVFCLARRARPPVSVW 910
Query: 298 LDSVTNHPL--KTERSFICADTG-------ALMQEPAKRFQPYKGENIKFSVQELS-EIK 347
L S N P+ + R + G L+ R ++ F +E+S I+
Sbjct: 911 LSSADNKPVTVRRHRYKVSKSNGEFDPTEDLLLPHDLIRGVKVGSRHLCFEQEEISGNIR 970
Query: 348 RVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA 407
++ + L GFKP+ L+ YH+ R F++P + + GS F L + L A+A
Sbjct: 971 DLAPVGIHLLGFKPIHRLRPYHHTRAPQFIYPDESYIRGSRVWFTTLLQVCLNRRLLAMA 1030
Query: 408 FYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPR 464
Y N PRL+AL+ Q+E + G QV PPG H+I+LPY DD R +E +
Sbjct: 1031 LYVQRKNIPPRLIALIPQEEKLDEDGVQVYPPGFHIIFLPYCDDFRDLELPEFEL----- 1085
Query: 465 ASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEE 524
AS+++V+ A ++K++ + + Q +NP LQRHYAVL+ALAL D + ++ D T+P+
Sbjct: 1086 ASEEQVEAAKTMVKKL-MVPYDPRQISNPILQRHYAVLEALALHRDHVDDVPDSTMPNFG 1144
Query: 525 GMARPGVVKAVEEFKLSVYGDNYDEEGDV---KVSEASRKRKAATENAAKECANYDWA-- 579
+ R +A E N +E V KV K++A+ N AK D+
Sbjct: 1145 AIQR----RAGNEIANFKRVCNLEESVPVKRPKVVADPEKKRASPSNRAKS-TEPDFTEE 1199
Query: 580 ---DLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLISRILTHMGK 623
DL G+LK +TV L+ L NL G +K L+++I H +
Sbjct: 1200 YLRDLYSHGELKRLTVPLLRQALKLLNLVPLGTKKAELVAQINKHFAE 1247
>gi|325185924|emb|CCA20428.1| ATPdependent DNA helicase 2 subunit putative [Albugo laibachii
Nc14]
Length = 660
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 197/648 (30%), Positives = 326/648 (50%), Gaps = 62/648 (9%)
Query: 7 DVFRDDDEESDNEFYQEHEAT---KEYVVYLVDASPKMFS-TTCP-----AEDQTDE-TH 56
DV+ D E DNE QE K+ ++ L+D MF+ T P ++DQ D T
Sbjct: 26 DVWNDTQAE-DNEASQEWTEVRQGKDALLILLDIRESMFTPCTSPQSKKLSDDQKDPITW 84
Query: 57 FHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTAR 116
FH + I + +K++II R + I FF + K L ++ E + L P+A+
Sbjct: 85 FHACIKVIIKIMKSKIIARDNSLIGIIFFGSNKATGNTALGQIY-----EYQTLSYPSAQ 139
Query: 117 FIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTAD-KRILLFTN 175
IK + + I S++ + E ++ N LW A + + D +RI +FTN
Sbjct: 140 RIKALKTVYATPSDNIQSEFNSMQMHEELAVSNILWQAGTVFSEAKLNGIDTQRIWIFTN 199
Query: 176 EDDPFGSIKGAAKNDMTRTTMQ-RAKDAQDLGISIELLPLSPPDE-EFKVSHFY----AD 229
+D P + M R+ Q +A++ +L S+ L + PPD F ++ FY D
Sbjct: 200 DDAP------VLPDGMERSRFQIQAQNHIELNRSLSLFYIHPPDTPTFSLTIFYDIVFQD 253
Query: 230 MIGLEGDDLALFMPSAG--QKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
++ + + + SA L D+ + L ++ F KR + + + +SI + YAL
Sbjct: 254 VMRDTSEKKSNIIQSAFGITSLNDLMETLLRKRFRKRRLAILPLRLTATISIGVELYALA 313
Query: 288 RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ-EPAKRFQPYKGENIKFSVQELSEI 346
+L++ TN PL +E ++C DTGA + E K++ PY G I FS ++ E+
Sbjct: 314 IVQHKSTPIFLNASTNKPLSSETKWLCEDTGAYLSPENIKKYHPYGGTRIYFSKDDIIEL 373
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
K V T L L F + L N+R F+FP+D V S+ F++L +M + ++A+
Sbjct: 374 KYVDTPSLHLICFHSIESLCQRENIRSPYFIFPNDNFVEKSSKAFVSLLCAMEKKRKYAL 433
Query: 407 A--FYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPR 464
A S PR VAL+ Q E GQ+ P G H+++LPY DDIR V + ++ AV
Sbjct: 434 ARMIARKYSEPRYVALLPQREEYDELGQIRPTGFHVVFLPYCDDIRDVCVENYESPAV-- 491
Query: 465 ASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIK--DETVPD 522
+ ++ A A+MK+++L + V +F NP LQ+HYA +QALAL+E+++ + D T+PD
Sbjct: 492 -DEKALELAMAMMKKLELAE--VPRFENPELQKHYASIQALALDEEELEYDESHDSTLPD 548
Query: 523 EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENA------------- 569
E G + V A+E ++ + +GD + + E RK ++ ++N
Sbjct: 549 EAGFRQGDVQDAIERYR-NAFGDMSE------IVEMKRKAQSKSKNVKRPKAIAEAQLSP 601
Query: 570 AKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
AK W ++ D+ L++ TV+E++++L HN ST+GRK L+ RI
Sbjct: 602 AKVFDTRKWREM-DENSLQKTTVKEMQMFLRFHNQSTSGRKADLMHRI 648
>gi|145509781|ref|XP_001440829.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|68655252|emb|CAI39212.1| Ku70-like protein [Paramecium tetraurelia]
gi|124408057|emb|CAK73432.1| unnamed protein product [Paramecium tetraurelia]
Length = 603
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 256/529 (48%), Gaps = 35/529 (6%)
Query: 4 DPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDE-THFHIAVS 62
D +D+F +D + S + + K+ V++LVD +F DQ + T F +S
Sbjct: 18 DGEDIFGEDADIS----VHDSGSKKDAVIFLVDCKKALFDM-----DQDGQGTVFSKILS 68
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
+ +K +II+ D + + F+NT+ N N N+ E +LD P+A IK
Sbjct: 69 AFSSFMKAKIISSPDDRIGMIFYNTKSTNNQLKFN-----NITEIYKLDGPSADIIKNCL 123
Query: 123 HIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS 182
IE++FEK+ Y + + + + LW+ ++ + RI LFT +D P+
Sbjct: 124 KIEQNFEKD----YQLGNNAH---FHECLWLCNHEFKELDKNKFNMRIFLFTPDDLPYFK 176
Query: 183 IKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFM 242
A + ++ AK +D + IEL PL P EFK++ FY ++I ++ D++ +
Sbjct: 177 DVNA-----RSSALKYAKQLKDADVQIELFPL-PSQNEFKIARFYGEIITVDLDEVNNAV 230
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
K+ D+ +++++ F KR + R+ I + + I L Y L+ LD
Sbjct: 231 LDTSTKIMDLHQRIKQKEFKKRALNRLIMDI-DDIKIGLKIYCLVNKAKKPYGKPLDRRY 289
Query: 303 NHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKP 361
N LK + FI +TG AL + E I + +++IK + L GFK
Sbjct: 290 NQQLKKKAQFIDEETGQALFPQQISTHLILGNEKIAIPKEYMAKIKGFEKPGMTLIGFKS 349
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVA 419
S LKDYHN R S F++P D+ V GS+ F AL + M+ R + S R A
Sbjct: 350 SSALKDYHNYRASYFLYPDDEHVNGSSQFFDALIQQMILKERIGIVRLVPKQGSQVRFCA 409
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
L+ Q E PPG+H+I+LPY+DDIR + + + + R + + A L+
Sbjct: 410 LLPQAEQYDENHFQTPPGLHLIFLPYADDIRGLSSVKQEGAEISRQT---LNAAKILVNA 466
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
+ ++DF F +PS+Q+ Y LQ LAL+E ++ E +D PD +GM +
Sbjct: 467 LTIQDFDCSNFEDPSIQKFYTYLQGLALQEQNIEEPEDLLQPDFKGMEK 515
>gi|332859996|ref|XP_521301.3| PREDICTED: X-ray repair cross-complementing protein 6 [Pan
troglodytes]
Length = 600
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 297/608 (48%), Gaps = 54/608 (8%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-ESFEKEIGSQYGIVSGSRE 144
T K KN + ++V ++LD P A+ I E D + + +K G GS +
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKRFQDMMG--HGS-D 140
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D
Sbjct: 141 YSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRD 195
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSK 263
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + K
Sbjct: 196 TGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRK 253
Query: 264 RIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQ 322
R + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 254 RALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLP 313
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 314 SDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEES 373
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMH 439
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 374 LVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQ 433
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQF-ANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A+++++ V + + L H
Sbjct: 434 LVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRFTYRRVLEVDSKLGLVTH 488
Query: 499 YAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV-- 555
A L D VP E M R G + V+EFK VY +Y+ EG V
Sbjct: 489 QATLLCF-----------DFLVPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKVTKRK 535
Query: 556 --SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L
Sbjct: 536 HDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQEL 590
Query: 614 ISRILTHM 621
+ + H
Sbjct: 591 LEALTKHF 598
>gi|115618058|ref|XP_001180453.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Strongylocentrotus purpuratus]
Length = 414
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 199/401 (49%), Gaps = 23/401 (5%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
A K+ +++L+D S +MF E D +HF +++ C L +II+ D V + FF
Sbjct: 34 AGKDSLIFLIDCSEQMF------EKDDDRSHFEMSIECAKTVLSNKIISSDKDLVGVVFF 87
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
T K KN ++ + LD+P+A I E + + +++G SG
Sbjct: 88 GTEKDKNSGSFKHIYAL-----QDLDQPSASRILELESFLTEGNNDFANKFGFESGY--- 139
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL +ALW + + K KR+LLFTN+D P K A R Q+AKD D+
Sbjct: 140 SLSDALWTCSNMFSQSPQKVGHKRVLLFTNDDHPHD--KNVA---FQRQAKQKAKDLDDI 194
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRI 265
GI I L+ ++ PD F+ S FY D++ D+ L +P A +K E + ++R + KR
Sbjct: 195 GIEILLMHMALPDSPFRFSEFYQDIVHGSEDEEGL-IPDASEKFEQLLARVRAKDHKKRT 253
Query: 266 VKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL-MQEP 324
RI F + GL + + Y L+R L TN LK + C DTG L M
Sbjct: 254 TGRIPFSLGKGLELGVGVYTLVRQQAKPYPVKLHRQTNEALKNKSKMYCEDTGELLMPSD 313
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
K++Q Y G+NI F E+ E+K+ L L GFKP S LK Y +++P+ F+FP + V
Sbjct: 314 IKKYQTYGGKNIIFEKDEVDEVKKFYDPGLTLMGFKPRSALKKYFHVKPAQFLFPDETSV 373
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ 423
GS +F AL + ++ A+ Y N P+ VAL+ Q
Sbjct: 374 SGSNTLFNALLQRCSARDKVAICRYIPRKNSPPKFVALLPQ 414
>gi|332231357|ref|XP_003264863.1| PREDICTED: X-ray repair cross-complementing protein 6, partial
[Nomascus leucogenys]
Length = 533
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 271/526 (51%), Gaps = 36/526 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + + + + T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFES----QSENELTPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 313 PSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEE 372
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGM 438
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG
Sbjct: 373 SLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGF 432
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRH 498
+++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H
Sbjct: 433 QLVFLPFADDKRKM----PFTEKI-MATSEQVDKMKAIVEKLRFT-YRSDSFENPVLQQH 486
Query: 499 YAVLQALALEEDDMPEIKDETVPD-EEGMARPGVVKAVEEFKLSVY 543
+ L+ALAL+ + + D T+P R G + V+EFK VY
Sbjct: 487 FRNLEALALDLMEPEQAVDLTLPKVAPNGKRLGSL--VDEFKELVY 530
>gi|241681420|ref|XP_002411604.1| ku P70 DNA helicase, putative [Ixodes scapularis]
gi|215504344|gb|EEC13838.1| ku P70 DNA helicase, putative [Ixodes scapularis]
Length = 575
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 282/599 (47%), Gaps = 42/599 (7%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKK 90
V++L+DA+ MF T D+ D + VS ++ +I + D+V + F T K
Sbjct: 9 VIFLIDATKNMFVAT----DEEDAFTQCLKVSLWQSTMLNKITSSPKDKVGVVLFGTEKD 64
Query: 91 KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNA 150
N V+V + L+ P A + + + + +K+ QYG L +A
Sbjct: 65 SNPSRFKNVYVI-----QALECPGATTVLNLESLIK--DKKSREQYG----HGNVCLADA 113
Query: 151 LWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIE 210
LW + + +R+L+ TN+DDP G+A+ D T +AKD G+ ++
Sbjct: 114 LWTCALMFSQ--CPVGHRRLLVLTNQDDPHA---GSAQLDQRART--KAKDLHQSGVEVD 166
Query: 211 LLPLSPPDE-EFKVSHFYADMIG---LEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
L+ L PP F+ Y D++ + GD+ P A KLE++ ++R + KR +
Sbjct: 167 LVHLQPPGGGAFRPKLLYQDLVSKDEVYGDEF----PEASDKLEELLQRVRLKDHKKRRL 222
Query: 267 KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPA 325
+ F + GL + L+ Y L+RPT L TN L + R D G LM
Sbjct: 223 ASLPFCLGPGLQLSLSLYNLVRPTGKPFPVRLAKDTNEELLSRRLTYAQDNGEVLMPGDI 282
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
+ Q Y G+ F + EL ++K ++ L+L GFKPL L+ H++RPS FV+P + +
Sbjct: 283 AKCQEYGGKKALFDLSELKQMKAMAPPGLQLLGFKPLERLRAQHHVRPSHFVYPDEGTIR 342
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGG-QVEPPGMHMIY 442
GST +F AL +S LR V ++ P+LV L+AQ+E + G Q PPG H++
Sbjct: 343 GSTRLFAALLQSCLRHKVAPVCYWVSRGAQAPKLVYLLAQEEERDSHGLQQMPPGFHVVQ 402
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LP+SDD R ++ L + + PR+ V A+ L++++ + F NP LQR + L
Sbjct: 403 LPFSDDRRRLQGLDCRSSSAPRSL---VSLASKLVQQLRFP-YHPDNFENPELQRFWRCL 458
Query: 503 QALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKR 562
+ALAL+ D + D T P+ + M + K +E F + + D + +S R
Sbjct: 459 EALALDRDVVETSVDYTRPNHDKMKQ-KAEKDLEAFTKAAFPDGCAPPTAARKRSSSSFR 517
Query: 563 KAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ A + DL+ +L +TV LK Y L +K LI I H+
Sbjct: 518 GTSQPGVLFGRAPTNRRDLS---QLFSLTVNVLKEYCKRKGLRCPAKKAELIECINEHL 573
>gi|145494698|ref|XP_001433343.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|68655248|emb|CAI39211.1| Ku70-like protein [Paramecium tetraurelia]
gi|124400460|emb|CAK65946.1| unnamed protein product [Paramecium tetraurelia]
Length = 602
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 256/529 (48%), Gaps = 35/529 (6%)
Query: 4 DPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDE-THFHIAVS 62
D +D+F +D + S + + K+ V++LVD +F DQ + T F +S
Sbjct: 18 DGEDIFGEDADIS----VHDSGSKKDAVIFLVDCKKALFDM-----DQDGQGTVFSKILS 68
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
+ +K +II+ D + + F+NT+ N N N+ E +LD P+A IK
Sbjct: 69 AFSSFMKAKIISSPDDRIGMIFYNTKSTNNQLKFN-----NITEIYKLDGPSADIIKNCL 123
Query: 123 HIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS 182
IE++FEK+ Y + + + + LW+ ++ + RI LFT +D P+
Sbjct: 124 KIEQNFEKD----YQLGNNAH---FHECLWLCNHEFKELDKNKFNMRIFLFTPDDLPYFK 176
Query: 183 IKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFM 242
A + ++ AK +D + IEL PL P EFK++ FY ++I ++ D++ +
Sbjct: 177 DLNA-----RSSALKYAKQLKDADVQIELFPL-PSQNEFKIARFYGEIITVDLDEVNNAV 230
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
K+ D+ +++++ F KR + R+ I + + I L Y L+ LD
Sbjct: 231 LDTSTKIMDLHQRIKQKEFKKRALNRLIMDI-DDIKIGLKIYCLVNKAKKPYGKPLDRRY 289
Query: 303 NHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKP 361
N LK + FI +TG AL + E I + +++IK + L GFK
Sbjct: 290 NQQLKKKAQFIDEETGQALFPQQISTHLILGNEKIAIPKEYMAKIKGFEKPGMTLIGFKS 349
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVA 419
S LKDYHN R S F++P D+ V GS+ F AL + M+ + + S R A
Sbjct: 350 SSALKDYHNYRASYFLYPDDEHVNGSSQFFDALIQQMILKEKIGIVRLVPKQGSQVRFCA 409
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
L+ Q E PPG+H+I+LPY+DDIR + + + + R + + A L+
Sbjct: 410 LLPQAEQYDENHFQTPPGLHLIFLPYADDIRGLSTVKQEGAEITRQT---LNAAKILVNA 466
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
+ ++DF F +PS+Q+ Y LQ LAL+E ++ E +D PD +GM +
Sbjct: 467 LTIQDFDCSNFEDPSIQKFYTYLQGLALQEQNIEEPEDLLQPDFKGMEK 515
>gi|255949402|ref|XP_002565468.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592485|emb|CAP98839.1| Pc22g15510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 658
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/644 (27%), Positives = 293/644 (45%), Gaps = 68/644 (10%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D S M T P+ D DE+ A+ C ++ +II+ +D +
Sbjct: 24 KSVKDAVLFAIDISSSML-TPRPSPDPKKHGDESPASAALKCAYHLMQQRIISNPHDMIG 82
Query: 82 ICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG 137
+ + T+ K N D + + LD P+A+ +K+ + + +
Sbjct: 83 VLLYGTQSSKFYDENEDDRGDLSYPHCYLYTDLDVPSAQEVKQLRSLASPADADDDVLQV 142
Query: 138 IVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
+ S+ N L+ A + + A +R+ + T+ D+P KG M
Sbjct: 143 LEPSKEPASMANMLFCANQIFTSKAPNFASRRLFVVTDNDNPHADNKG-----MRSAATV 197
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----GLEGDDLALFMP----SAGQKL 249
RA+D DLG++IEL P+S PD EF S FY D+I +GD A P S +
Sbjct: 198 RARDLYDLGVNIELFPISQPDHEFDTSKFYDDIIYKTSPSDGDAPAYLQPDTNTSTAKGD 257
Query: 250 EDMKDQLRKRMFSKRIVKRISFI------IANGLSIELNTYALIRPTVPG--AITWLDSV 301
+ R V R S I I +N Y L++ P W
Sbjct: 258 GLSLLNSLLSSINSRSVPRRSLFSNVPLEIGPNFKISVNGYLLLKKQEPARSCFVWQGGE 317
Query: 302 TNHPLKTERSFICADTGALMQEP-AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
T K + + DTG +++ ++ + GE + F+++E ++ +R+ GFK
Sbjct: 318 TAQIAKGVTTLMSDDTGQEIEKSDIRKAYKFGGEQVSFTIEEQQALRSFGDPVIRIIGFK 377
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLV 418
PLS L + N++ +F++PS+++ VGST +F ALH+ +L + A+ ++ N P L
Sbjct: 378 PLSALPFWANVKHPSFIYPSEEDYVGSTRVFSALHQKLLESEKLALVWFIPRRNASPVLA 437
Query: 419 ALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAAA 475
A++A E + G Q PPGM +I LP++DD+R P +H DA+ A D V++
Sbjct: 438 AMIAGAEKIDENGVQKIPPGMWIIPLPFADDVRQNPESTVHRAGDALNDAMRDVVRQ-LQ 496
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVV--- 532
L K + + ++ NPSLQ HY +LQA+AL+ED D+TVP + + G
Sbjct: 497 LPKAV----YDPSKYPNPSLQWHYRILQAIALDEDFPESPDDKTVPKYRQVHKVGCFHDP 552
Query: 533 ----KAVEEFKLS---VYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLAD-- 583
EE KL ++G G V + KR A TE A + + + ++
Sbjct: 553 RNARTWAEELKLQASEMFG------GSVAATSTLVKRGAKTEAAGEHPSKRVKVEDSEPG 606
Query: 584 ----------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
KG + ++TV LK +L AH +T G+K L+ R+
Sbjct: 607 VEDEVKKCYAKGTVSKLTVAVLKEFLHAHGRATAGKKADLVDRV 650
>gi|452822798|gb|EME29814.1| ATP-dependent DNA helicase 2 subunit 1 isoform 1 [Galdieria
sulphuraria]
Length = 593
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 165/591 (27%), Positives = 301/591 (50%), Gaps = 44/591 (7%)
Query: 59 IAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFI 118
+A++CI + K++II+ D + + F T K N DL +++V +LD P I
Sbjct: 14 LALNCIKEIFKSRIISDTGDLLGVVLFGTSKVNNPNDLASIYVL-----LELDVPDPESI 68
Query: 119 KEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKG-SSKTAD--KRILLFTN 175
+ +E++ + + SQ G + + L+ + LL SKT + KR+LLFT+
Sbjct: 69 LYLETLEKT-PQWMMSQLGSLERYAKVKFQELLFTCRSLLNHAVRSKTLNVRKRLLLFTD 127
Query: 176 EDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPL-SPPDEEFKVSHFYADMIGLE 234
+DDP + ++ +++A+D + G++IELLPL S + F FY D+IG
Sbjct: 128 DDDPIEN-----DENVKNLNIRQARDLSESGMNIELLPLKSSRSKPFDYHLFYEDVIGSS 182
Query: 235 GDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGL----------SIELNTY 284
+L + + E+++ + K+ + KR++ +F+ NGL ++ L Y
Sbjct: 183 RQELEP-VSDPISRFEELQLHILKKKYKKRVLNN-TFLYLNGLQNEGAHAELETVGLEVY 240
Query: 285 ALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK-RFQ-PYKGENIKFSVQE 342
AL +L++ N P++ ++GAL+ R+ P+ G F+ E
Sbjct: 241 ALFHRPSRSKKVFLEARNNEPVRRVTIAYSEESGALLANANDIRYSFPFAGVACVFTHSE 300
Query: 343 LSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLN 402
+ E+ + + L GF+ + LK +N+RPS F++PSD + GS + L + ML+ N
Sbjct: 301 MEELGHLCRYGMELIGFENKNKLKWQYNMRPSYFLYPSDHTIKGSQLLMAVLWKQMLQEN 360
Query: 403 RFAV--AFYGNPSNPRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIRP-VEELHSD 458
+ A+ + S+PRL ALV QDE + Q EP G H+I+LP++++IR ++ +
Sbjct: 361 QIAIVRVCFRRTSHPRLAALVPQDEKKTESHLQTEPCGFHLIWLPFAEEIRKEWKKQYPK 420
Query: 459 TDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE 518
+ +P S V+ A ++ ++ + + ++++P +QR+Y LQALAL + + P+++D
Sbjct: 421 WNNLP--SQQCVEAAMNVISKLSMPSYDPSKYSDPDIQRYYNGLQALALNQTNFPQVEDT 478
Query: 519 TVPDEEGMARPGVVKAVEEFKLSVYGDNY---DEEGDVKVSEASRKRKAATENAAKEC-- 573
D+ MA+ + +EE+ V + +E ++ + ++A + +K+
Sbjct: 479 LDTDDAQMAQVA-KEELEEWTKIVASEPVGIIKQEKSLRSPKRFHIKRAVEKLRSKQFLE 537
Query: 574 ANYDWADLA-DKGK--LKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
DW LA DKG L++ V LK++ AH+L +GRK LI RI T++
Sbjct: 538 QQLDWKQLAFDKGNDGLEKQNVTTLKMFCAAHDLKKSGRKAELIERIRTYL 588
>gi|226508906|ref|NP_001145450.1| uncharacterized protein LOC100278832 [Zea mays]
gi|195656429|gb|ACG47682.1| hypothetical protein [Zea mays]
Length = 178
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
M+LDP+ +FRDD +E ++ QE EA KE VVYLVDASPKMF+ +++ ETHFH
Sbjct: 1 MDLDPEGIFRDDSDEDEDSV-QEREANKEMVVYLVDASPKMFTPATTQDNEKQETHFHTI 59
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKE 120
V+CI +SLKTQII R YDEVAICFFNT++KKNLQD V+V+NV +REQLDRPTA+ IK+
Sbjct: 60 VNCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYNVGDREQLDRPTAKLIKD 119
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLL 158
F IE+SF IGS+YGI +GSREN+LYNALWVA+ +L
Sbjct: 120 FSLIEDSFMSTIGSRYGITAGSRENTLYNALWVARFML 157
>gi|402884377|ref|XP_003905662.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 3
[Papio anubis]
Length = 568
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 261/524 (49%), Gaps = 32/524 (6%)
Query: 108 EQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKT 165
++LD P A+ I E D F+ + G + ++ + SL LWV L K
Sbjct: 65 QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGSDYSLSEVLWVCANLFSDVQFKM 120
Query: 166 ADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSH 225
+ KRI+LFTNED+P G+ +AK RT +A D +D GI ++L+ L P F +S
Sbjct: 121 SHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISL 174
Query: 226 FYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTY 284
FY D+I + E DDL + + KLED+ ++R + KR + R+ + + I + Y
Sbjct: 175 FYRDIISIAEDDDLRVHFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGVY 233
Query: 285 ALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQEL 343
L++ + L TN P+KT+ R+F + G L+ KR Q Y I +E
Sbjct: 234 NLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEET 293
Query: 344 SEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNR 403
E+KR L L GFKPL LK +H LRPS FV+P + V+GS+ +F AL L
Sbjct: 294 EELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEV 353
Query: 404 FAVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD 460
A+ Y N P VALV QD E+ QV PPG +++LP++DD R + T+
Sbjct: 354 AALCRYTPRRNIPPYFVALVPQDEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTE 409
Query: 461 AVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
+ A+ ++V K A+++++ + F NP LQ+H+ L+ALAL+ + + D T+
Sbjct: 410 KI-MATPEQVDKMKAIVEKLRFT-YRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTL 467
Query: 521 PDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWAD 580
P E M + + V+EFK VY +Y+ EG V RK + + Y +
Sbjct: 468 PKVEAMNK-RLGSLVDEFKELVYPPDYNPEGKV----TKRKHDNDGSGSKRPKVEYSEEE 522
Query: 581 LA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
L KG L + TV LK A+ L + +K+ L+ + H
Sbjct: 523 LKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHF 566
>gi|307104778|gb|EFN53030.1| hypothetical protein CHLNCDRAFT_53981 [Chlorella variabilis]
Length = 658
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 194/676 (28%), Positives = 298/676 (44%), Gaps = 84/676 (12%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDE--------THF 57
+ V+ DD EE + E+E +KE +V+L+DASP M E+ +E +
Sbjct: 7 ESVWGDDFEEPE-----EYEPSKERIVFLIDASPAMLEPCEVDEEGKEEEEKDFAGLSWL 61
Query: 58 HIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNL---QDLNAVFVFNVAEREQLDRPT 114
A +K +II+ DE+A+ +N K+ D ++ + L++P
Sbjct: 62 EAAAKVALHIMKQKIISAAGDEMAVLLYNAAAAKSAEVASDFEGCYLL-----QPLEQPG 116
Query: 115 ARFIKEFDHIEESF-EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLF 173
A +++ + SF EK +GS+ L +A W+A+ + A R+L+F
Sbjct: 117 AESVRQLEDFSLSFFEKNVGSK------EDAQCLISAFWMARHMCSSMKGPKATHRLLVF 170
Query: 174 TNEDDPFGSI-KGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYAD-MI 231
T + PF KG + R + +D G +EL P++PP F + F+ ++
Sbjct: 171 TRTELPFQRYDKGHDPSHRWRQLEGHLRTLRDAGTLVELYPMAPPAAAFDLQPFWRSVLL 230
Query: 232 GLEGDDLALFMPSAGQ--------KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNT 283
L G A +L D+ +R + +R V I + + GL + +
Sbjct: 231 FLRGQATAGGGEGEEVAEEAQQVFRLRDLFTVVRSKAHKRRAVGSILWRLGKGLELAVKL 290
Query: 284 YALI-RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGEN----IKF 338
Y ++ R +P A+ + T H +K + I TG +++ +K N +
Sbjct: 291 YQMVQRQRIPPALK-ISGRTGHEVKAATAQIDKYTGEALEKDQILHYYFKKGNRYPKVYI 349
Query: 339 SVQELSEIKRVSTGHLRLHGFKPL-----------SYLKDYHNLRPSTFVFPSDKEVVGS 387
+ +E +IK V + L GFKP+ LK++H R STF++P +KEV GS
Sbjct: 350 TPEETRQIKGVGQRGMTLLGFKPIRRGSGGCVVRWCCLKEHHQTRNSTFIYPDEKEVAGS 409
Query: 388 TCIFIALHRSMLRLNRFAVAFYG--NPSNPRLVALVAQDEI-VRAGGQVEPPGMHMIYLP 444
FIAL M AV P LVAL+ Q+E G Q PPGMH+IYLP
Sbjct: 410 ATCFIALWDVMRETGTMAVCRVAPTKARTPTLVALLPQEETQYDDGSQATPPGMHLIYLP 469
Query: 445 YSDDIRPVEELHSDTDAVPRA-SDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQ 503
+ DDIR E AV A S+ +V A L+ + L F NP+LQRHY VL+
Sbjct: 470 FMDDIRHPETSADFVGAVRHAPSESQVAAAEVLILELQLPAFDCGSVLNPALQRHYEVLE 529
Query: 504 ALA------LEEDDMPEIKDETVPDEEGMARPGV-----------VKAVEEFKLSVYGDN 546
+LA L ED I D T+P E A G ++A+ FK G
Sbjct: 530 SLAQGMEPCLVEDS--SIGDPTLPGWEEEAGEGADDEEVAEVAARMQAILGFK-EACGLT 586
Query: 547 YDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLST 606
DE +A KR AA A A A G LK +T+ +LK++L + L+
Sbjct: 587 DDEP-----KKAGTKRAAAAPVDADAVAALGVEAKAAAGTLKSLTLDQLKMWLRSRGLTV 641
Query: 607 TGRKETLISRILTHMG 622
G+K+ LI+RI +G
Sbjct: 642 GGKKDELIARIQNKLG 657
>gi|119580852|gb|EAW60448.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 (Ku autoantigen, 70kDa), isoform CRA_b [Homo
sapiens]
gi|193786292|dbj|BAG51575.1| unnamed protein product [Homo sapiens]
Length = 568
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 264/525 (50%), Gaps = 34/525 (6%)
Query: 108 EQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKT 165
++LD P A+ I E D F+ + G + ++ + SL LWV L K
Sbjct: 65 QELDNPGAKRILELDQ----FKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKM 120
Query: 166 ADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSH 225
+ KRI+LFTNED+P G+ +AK RT +A D +D GI ++L+ L P F +S
Sbjct: 121 SHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISL 174
Query: 226 FYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTY 284
FY D+I + E +DL + + KLED+ ++R + KR + R+ + + I + Y
Sbjct: 175 FYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIY 233
Query: 285 ALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQEL 343
L++ + L TN P+KT+ R+F + G L+ KR Q Y I +E
Sbjct: 234 NLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEET 293
Query: 344 SEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNR 403
E+KR L L GFKPL LK +H LRPS FV+P + V+GS+ +F AL L
Sbjct: 294 EELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEV 353
Query: 404 FAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD 460
A+ Y N P VALV Q +E+ QV PPG +++LP++DD R + T+
Sbjct: 354 AALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTE 409
Query: 461 AVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
+ A+ ++V K A+++++ + F NP LQ+H+ L+ALAL+ + + D T+
Sbjct: 410 KI-MATPEQVGKMKAIVEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTL 467
Query: 521 PDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANY 576
P E M + + V+EFK VY +Y+ EG V +E S ++ E + +E +
Sbjct: 468 PKVEAMNK-RLGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH 526
Query: 577 DWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
KG L + TV LK A+ L + +K+ L+ + H
Sbjct: 527 -----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHF 566
>gi|426394620|ref|XP_004063589.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 3
[Gorilla gorilla gorilla]
Length = 568
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 263/525 (50%), Gaps = 34/525 (6%)
Query: 108 EQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKT 165
++LD P A+ I E D F+ + G + ++ + SL LWV L K
Sbjct: 65 QELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGSDYSLSEVLWVCANLFSDVQFKM 120
Query: 166 ADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSH 225
+ KRI+LFTNED+P G+ +AK RT +A D +D GI ++L+ L P F +S
Sbjct: 121 SHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRDTGIFLDLMHLKKPGG-FDISL 174
Query: 226 FYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTY 284
FY D+I + E +DL + + KLED+ ++R + KR + R+ + + I + Y
Sbjct: 175 FYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIY 233
Query: 285 ALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQEL 343
L++ + L TN P+KT+ R+F + G L+ KR Q Y I +E
Sbjct: 234 NLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEET 293
Query: 344 SEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNR 403
E+KR L L GFKPL LK +H LRPS FV+P + V+GS+ +F AL L
Sbjct: 294 EELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEV 353
Query: 404 FAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD 460
A+ Y N P VALV Q +E+ QV PPG +++LP++DD R + T+
Sbjct: 354 AALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTE 409
Query: 461 AVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
+ A+ ++V K A++ ++ + F NP LQ+H+ L+ALAL+ + + D T+
Sbjct: 410 KI-MATPEQVGKMKAIVDKLRFT-YRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTL 467
Query: 521 PDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANY 576
P E M + + V+EFK VY +Y+ EG V +E S ++ E + +E +
Sbjct: 468 PKVEAMNK-RLGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH 526
Query: 577 DWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
KG L + TV LK A+ L + +K+ L+ + H
Sbjct: 527 -----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHF 566
>gi|395819674|ref|XP_003783205.1| PREDICTED: X-ray repair cross-complementing protein 6 isoform 3
[Otolemur garnettii]
Length = 568
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 271/543 (49%), Gaps = 39/543 (7%)
Query: 94 QDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSRENSLYNAL 151
QD + + F+++ +E LD P A+ I E D F+ + G ++ ++ + SL L
Sbjct: 51 QDEDELTPFDMSIQE-LDNPGAKRILELDQ----FKGQQGKKHFQDLIGHGSDYSLSEVL 105
Query: 152 WVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIEL 211
WV L K + KRI+LFTN+D+P G +AK RT +A D ++ GI ++L
Sbjct: 106 WVCANLFSDVQFKMSHKRIMLFTNDDNPHGD--DSAKASRART---KAGDLRETGIFLDL 160
Query: 212 LPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRIS 270
+ L P + +S FY D+I + E +DL + + +LED+ ++R + KR++ +
Sbjct: 161 MHLKKPGG-YDISLFYRDIISIAEDEDLGVHFEESS-RLEDLLRKVRAKENKKRVLFSLK 218
Query: 271 FIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QEPAKRFQ 329
F ++ +++ L Y L++ V A L TN P+KT+ +TG+L+ KR Q
Sbjct: 219 FKLSKDIALTLGVYNLVQKAVKPAPIRLYRETNEPVKTKTRTFNVNTGSLLLPSDTKRSQ 278
Query: 330 PYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTC 389
Y I +E E+KR L L GFKPL LK +H LRPS FV+P + V GS+
Sbjct: 279 MYGSRQIVLEKEETEELKRFDEPGLILIGFKPLEMLKKHHYLRPSLFVYPEESLVNGSST 338
Query: 390 IFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYS 446
+F AL L AV Y N P VALV Q+E + QV P G +++LPY+
Sbjct: 339 LFSALLTKCLEKEVLAVCRYTPRKNIPPYFVALVPQEEELDGQKIQVTPSGFQLVFLPYA 398
Query: 447 DDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALA 506
DD R V T A+ ++V K A+++++ K + F NP LQ+H+ L+ALA
Sbjct: 399 DDKRKVPFPEKVT-----ANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQHFRNLEALA 452
Query: 507 LEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
L+ + + D T+P E M R G + V+EFK VY +Y+ + E K+K
Sbjct: 453 LDLMEPEQAVDLTLPKVEAMNERLGSL--VDEFKELVYPPDYNPK------EKITKKKQD 504
Query: 566 TENAAKECANYDWAD-----LADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
E + ++++ KG L + TV LK A+ L +K+ L+ + H
Sbjct: 505 DEGPGSKRPKVEFSEEELKAHVSKGTLGKFTVPMLKEACRAYGLKGGMKKQELLDTLTKH 564
Query: 621 MGK 623
K
Sbjct: 565 FQK 567
>gi|452984054|gb|EME83811.1| hypothetical protein MYCFIDRAFT_65414 [Pseudocercospora fijiensis
CIRAD86]
Length = 665
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 182/659 (27%), Positives = 306/659 (46%), Gaps = 86/659 (13%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFH---IAVSCIAQSLKTQIINRLYDEV 80
+++ K+ V++ +DAS M + + +T A+ C ++ +II+ D +
Sbjct: 25 YKSQKDAVLFAIDASASMLRKPSEIDAKKPDTALSSTAAALKCAYALMQQRIISNPNDMM 84
Query: 81 AICFFNTRKKK---------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
I FNT K K N Q + + + LD P A +K+ + E E+
Sbjct: 85 GILLFNTEKSKFQEQDGESRNWQYPHCYLLMD------LDVPAAADVKQLRTLVEDEEEA 138
Query: 132 IGSQYGIVSGSR-ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
I+ S+ E S+ N L+ A + + + +R+ L T+ D P A+ D
Sbjct: 139 AD----ILQASKDEVSMANVLFCANQVFTTKAPNFSSRRLFLVTDNDYPH-----ASDRD 189
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDE--EFKVSHFYADMI-GLEGDDLALFMP---- 243
+ RAKD DLG++IEL P+S PD F + FY D+I D MP
Sbjct: 190 ARNSAAVRAKDLYDLGVTIELFPISHPDRGYTFDRTRFYNDIIYSSTPSDPDAPMPLTSD 249
Query: 244 ----SAGQK-----LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGA 294
S+ K L+ + + + R +R + F I GL I + Y + + P
Sbjct: 250 IKAASSSAKDGITLLQSLINSVASRNAPRRTFFNVPFEIGPGLKIGVKGYIIFKKQEPKR 309
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQEPAKR----------FQPYKGENIKFSVQELS 344
+++ P +E++ I + +++E R F+ + GE + FS++E +
Sbjct: 310 TSYV----YLPPDSEKAQIAVGSSTMVEEETARTVEKTEIRKAFK-FGGETVTFSLEEEA 364
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
+IK +R+ GFKP+S L + L S F++PS++ VGST +F ALH+ +L+ +F
Sbjct: 365 KIKDFGDPTIRILGFKPMSMLPMWATLDKSVFIYPSEETWVGSTRVFSALHQKLLKDQKF 424
Query: 405 AVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
+A+Y N P+L A++ E GG Q PPGM + LP++DDIR E +
Sbjct: 425 GLAWYIARRNATPKLAAVIPGAEERNEGGDQHMPPGMWVKVLPFADDIREPPETN----- 479
Query: 462 VPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
V RA DD V +++++ L + ++ NP+LQ + +LQALALEED + +D+T
Sbjct: 480 VVRAPDDVVDAMRKVVQQLQLPKGVYDPTKYPNPALQWFFKILQALALEEDLPEQPEDKT 539
Query: 520 VPDEEGM-ARPG--VVKAVEEFKLSVYGDNYDEEGDVK-VSEASRKRKAATENAAKECAN 575
+P + + R G VV+ E + N E +K + + KR AA+ A++
Sbjct: 540 LPRYKQIHKRAGGYVVEWGELLDKAFDEWNTTNESRIKPATNGASKRTAASSTASRSKKV 599
Query: 576 YDWADLAD-------------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
D D D KGK++ + +LK ++ LST GRK L+ + ++
Sbjct: 600 KDENDDDDEGVTDATMRAAFQKGKIESFKLPDLKRWMKTKGLSTGGRKADLVELVTSYF 658
>gi|327298311|ref|XP_003233849.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
gi|326464027|gb|EGD89480.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
rubrum CBS 118892]
Length = 646
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/637 (26%), Positives = 311/637 (48%), Gaps = 53/637 (8%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQIINRLYDE 79
++++K+ V++ ++ S M T P + ++ + ++ +S ++ +II+ D
Sbjct: 24 YKSSKDAVLFAIEVSESML--TPPPDSKSKKADKDAPITAALKSAYHIMQQRIISNPQDM 81
Query: 80 VAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
+ + + T+ K + + + + LD P A +K+ + E +++ G++
Sbjct: 82 MGVLLYGTKGSKFYDEDEEGRGTLPYPHCYLYTDLDVPAAADVKDLRALAE--DEDSGAE 139
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
++ ++ N L+ A + ++ + +R+ + T+ D+P + K +
Sbjct: 140 I-LIPSEEPVTMANVLFCANQIFTSKAANFSSRRLFIITDNDNPHQNEKA-----LRSAA 193
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQKLED-- 251
RAKD DLG+ IEL P+S P EEF S FYAD+I D A P K
Sbjct: 194 TVRAKDLYDLGVIIELFPISRPGEEFDRSKFYADIIYTASPTDPEAPAFPQVATKSSTSG 253
Query: 252 -----MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITWLD 299
+ + L + SK + +R F I GL I + Y + + P WL+
Sbjct: 254 GDGITLLNSLISSINSKSVPRRALFSNVPLEIGPGLKISVTGYLIFKRQEPSRSCYIWLE 313
Query: 300 SVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
K + + D+ +++ ++ + GE + F+ +E +EI+ +R+ G
Sbjct: 314 GEQPQIAKGITTQLADDSAREVEKWEIRKAYKFGGEQVSFTQEEQAEIRNFGEPTIRILG 373
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPLS L + +++ TF++PS++ VGST F ALH+++L+ ++ A+ ++ N P
Sbjct: 374 FKPLSSLPIWASMKHPTFLYPSEEGYVGSTRTFSALHQTLLKQSKMALVWFVPRRNAAPV 433
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ A++A +E + G Q PPGM ++ LPY+DDIR E + T A D + K
Sbjct: 434 MAAMIAGEEKLDDNGEQTIPPGMWILPLPYADDIRQNPETNHIT-----APDSLINKMRP 488
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG-- 530
+++++ L++ + ++ NPSLQ HY +LQALALEED + +D+T P + + R G
Sbjct: 489 IIRQLQLQNAQYDPRRYPNPSLQWHYKILQALALEEDLPEKPEDKTKPKYKAIDKRTGDL 548
Query: 531 VVKAVEEFKLSVYGDNYDEEGDVKVSE--ASRKRKAATENAAKECANYDWADLA---DKG 585
V++ EE + + + + A ++ E A+K+ + D+ +KG
Sbjct: 549 VIEWGEELEAQYRALEKSQPATSTLVKRPAPSAKEIKEEPASKKAKTEELEDIKAHYEKG 608
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
L ++TV LK +L +H+L T+G+K L+ R+ H G
Sbjct: 609 TLNKLTVAVLKDFLTSHSLPTSGKKADLVERVEEHFG 645
>gi|425774068|gb|EKV12387.1| Ku seventy [Penicillium digitatum Pd1]
gi|425776194|gb|EKV14423.1| Ku seventy [Penicillium digitatum PHI26]
Length = 653
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 174/642 (27%), Positives = 294/642 (45%), Gaps = 57/642 (8%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D S M T P+ D + E+ A+ C ++ +II+ D +
Sbjct: 24 KSVKDAVLFAIDISSSML-TPRPSPDPKKHSAESPASAALKCAYHLMQQRIISNPRDMIG 82
Query: 82 ICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG 137
+ + T+ K N +D + + LD P+A+ +K + + +
Sbjct: 83 VLLYGTKSSKFYDENEEDRGNLSYPHCYLYTDLDVPSAQEVKHLRSLASPAGADDDVRQV 142
Query: 138 IVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
+ S+ N L+ A + + + +R+ + T+ D+P KG M
Sbjct: 143 LEPSKEPVSMANMLFCANQIFTSKAPNFSSRRLFVVTDNDNPHADNKG-----MRSAATV 197
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----GLEGDDLALFMP----SAGQKL 249
RA+D DLG++IEL P+S PD EF S FY D+I +GD A P S +
Sbjct: 198 RARDLYDLGVNIELFPISQPDHEFDTSKFYDDIIYKTSPSDGDAPAYLQPDTNASTAKGD 257
Query: 250 EDMKDQLRKRMFSKRIVKRISFI------IANGLSIELNTYALIRPTVPG--AITWLDSV 301
+ R V R S I +I +N Y L++ P W
Sbjct: 258 GLSLLNCLLCSINSRSVPRRSLFSNVPLEIGPDFTISVNGYLLLKKQEPARSCFVWQGGE 317
Query: 302 TNHPLKTERSFICADTGALMQEP-AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
T K + + DTG +++ ++ + GE I F+++E ++ +R+ GFK
Sbjct: 318 TAQIAKGVTTLMSDDTGQEIEKADIQKAYKFGGEQISFTIEEQQALRSFGDPVIRIIGFK 377
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLV 418
LS L + N++ +F++PS++ +GST +F AL + +L + A+ ++ N P L
Sbjct: 378 SLSALPIWANVKHPSFIYPSEENYIGSTRVFSALQQKLLDSEKLALVWFIPRKNASPVLA 437
Query: 419 ALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAAA 475
A++A E + G Q PPGM +I LP++DD+R P ++ DA+ A D V++
Sbjct: 438 AMIAGAEKIDENGVQKIPPGMWIIPLPFADDVRQNPESTVNRAGDALNDAMRDVVRQ-LQ 496
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG--VV 532
L K + + ++ NPSLQ HY +LQA+AL+ED D+TVP + R G ++
Sbjct: 497 LPKAV----YEPSKYPNPSLQWHYRILQAIALDEDFPESPDDKTVPKYRQIHKRAGDYIL 552
Query: 533 KAVEEFKLS---VYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWAD--------L 581
K EE KL ++G + VK K + A E+ +K D A
Sbjct: 553 KWAEELKLQASEMFGSSVATSTLVK---RDAKSEPAGEHPSKRVKVEDSASGVEHEVKKC 609
Query: 582 ADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
+KG + ++TV LK +L +H +T G+K LI R+ + K
Sbjct: 610 YEKGTVSKLTVVVLKEFLHSHGRATAGKKADLIDRVEQYFEK 651
>gi|318054304|gb|ADV35594.1| X-ray repair complementing defective repair 6, partial [Brachionus
ibericus]
Length = 494
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 229/476 (48%), Gaps = 28/476 (5%)
Query: 53 DETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDR 112
D+T F + I + +I D + I FF T + +D ++ ++LD+
Sbjct: 10 DKTLFEKCMKAIQNMYQQKIYGSDKDFLGIVFFGTEQNNTSEDFPHIYTL-----QELDQ 64
Query: 113 PTARFIKEFDHIEESFE-KEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRIL 171
P+A IKE + +F+ K +YG S E +L W + + K +RI+
Sbjct: 65 PSAERIKEIEQFSTNFDFKNFRQEYG---NSNEYALNKVFWWCSNMFSLITQKLDTRRIM 121
Query: 172 LFTNEDDPFGSIKGAAKNDMT--RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYAD 229
LFT +D P +ND T + ++KD D+G+ +E++P+ E+F S FYAD
Sbjct: 122 LFTRKDHP-------HENDKTLEKLAKNKSKDLYDVGVILEVVPVVLEGEKFDFSKFYAD 174
Query: 230 MIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRP 289
+ L +++ L +P + E+++ +R + +R ++ N LSI + + L+R
Sbjct: 175 ALMLSEEEIKL-LPDPAENFEELEKTVRSKDHKRRPYTHLNLEFDNNLSISCSVFNLVRE 233
Query: 290 TVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKR 348
LD TN KT DTG L K G+ I F E+ IKR
Sbjct: 234 CSKPTKIKLDKKTNVETKTVTRRFNPDTGEILFASDTKLALDIFGKRIAFEQDEIKSIKR 293
Query: 349 VSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAF 408
LRL GFK L +K Y ++P F++P +K + GST +F AL + L +F +
Sbjct: 294 FGNPALRLIGFKDLKTIKPYLYVKPGHFLYPDEKSIEGSTTLFGALLQKCLEKEKFILCE 353
Query: 409 YGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRAS 466
N PRLVAL Q E + Q+ PPG H++YLP++DDIR ++ + +T P +
Sbjct: 354 MICRINTPPRLVALYPQQEEIEEKIQMIPPGFHVLYLPFADDIRQIDRM-VETKKNPEVA 412
Query: 467 DDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
+ K L + +DF NP+LQ+ + ++A+AL ++ +++D T+PD
Sbjct: 413 ELFTKCINKLKFKYSPEDFK-----NPALQKLWFEIEAIALAREETEQVEDLTLPD 463
>gi|397487216|ref|XP_003814702.1| PREDICTED: X-ray repair cross-complementing protein 6 [Pan
paniscus]
Length = 605
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 183/622 (29%), Positives = 293/622 (47%), Gaps = 77/622 (12%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQDMMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLE-GDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D G S F+ D LE G D L AG++ + R +
Sbjct: 195 DTG-----------------SSFFFDGNSLEPGTDGRL----AGEQXXXAXTTVGGRETN 233
Query: 263 KRIVKRISFI---------------IANGLSIELNTYALIRPTVPGAITWLDSVTNHPLK 307
+ +++ F + + I + Y L++ + L TN P+K
Sbjct: 234 EPYHRKVQFFSSCSFIFHSLRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVK 293
Query: 308 TE-RSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLK 366
T+ R+F + G L+ KR Q Y I +E E+KR L L GFKPL LK
Sbjct: 294 TKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLK 353
Query: 367 DYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ- 423
+H LRPS FV+P + V+GS+ +F AL L A+ Y N P VALV Q
Sbjct: 354 KHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQE 413
Query: 424 DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK 483
+E+ QV PPG +++LP++DD R + T+ + A+ ++V K A+++++
Sbjct: 414 EELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRFT 468
Query: 484 DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVY 543
+ F NP LQ+H+ L+ALAL+ + + D T+P E M + + V+EFK VY
Sbjct: 469 -YRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNK-RLGSLVDEFKELVY 526
Query: 544 GDNYDEEGDVKV----SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYL 599
+Y+ EG V +E S ++ E + +E + KG L + TV LK
Sbjct: 527 PPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEAC 581
Query: 600 MAHNLSTTGRKETLISRILTHM 621
A+ L + +K+ L+ + H
Sbjct: 582 RAYGLKSGLKKQELLEALTKHF 603
>gi|326475016|gb|EGD99025.1| Ku70/Ku80 beta-barrel domain-containing protein [Trichophyton
tonsurans CBS 112818]
Length = 646
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 166/637 (26%), Positives = 304/637 (47%), Gaps = 53/637 (8%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQIINRLYDE 79
++++K+ V++ ++ S M T P ++ + ++ +S ++ +II+ D
Sbjct: 24 YKSSKDAVLFAIEVSESML--TPPPISKSKKADKDAPITAALKSAYHIMQQRIISNPQDM 81
Query: 80 VAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
+ + + T+ K + + + + LD P A +K+ + E E +
Sbjct: 82 MGVLLYGTKNSKFYDEDEEGRGTLPYPHCYLYTDLDVPAASDVKDLRALAED---EDSAA 138
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
++ ++ N L+ A + ++ + +R+ + T+ D+P + K +
Sbjct: 139 EILIPSEEPVTMANVLFCANQIFTSKAANFSSRRLFIITDNDNPHQNEKA-----LRSAA 193
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQKLED-- 251
RAKD DLG+ IEL P+S P EEF S FYAD+I D A P K
Sbjct: 194 TVRAKDLYDLGVIIELFPISRPGEEFDRSKFYADIIYKASPTDPEAPAFPQVATKTSTTG 253
Query: 252 -----MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITWLD 299
+ + L + SK + +R F I GL I + Y + + P WL+
Sbjct: 254 GDGITLLNSLISSINSKSVPRRALFSNVPLEIGPGLKISVTGYLIFKRQEPSRSCYIWLE 313
Query: 300 SVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
K + + D+ +++ ++ + GE I F+ +E +EI+ +R+ G
Sbjct: 314 GEQPQIAKGMTTQLADDSAREVEKWEIRKAYKFGGEQISFTQEEQAEIRNFGEPTIRILG 373
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPLS L + +++ TF++PS++ VGST F ALH+++L+ ++ A+ ++ N P
Sbjct: 374 FKPLSSLPIWASMKHPTFLYPSEEGYVGSTRTFSALHQTLLKQSKMALVWFVPRRNAAPV 433
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ A++A +E + G Q PPGM ++ LP++DDIR E + T A D + K
Sbjct: 434 MAAMIAGEEKLDENGEQTIPPGMWILPLPFADDIRQNPETNHIT-----APDSLINKMRP 488
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG-- 530
+++++ L++ + ++ NPSLQ HY +LQALAL+ED E +D+T P + + R G
Sbjct: 489 IIRQLQLQNAQYDPQRYPNPSLQWHYKILQALALDEDLPEEPEDKTKPKYKAIDKRTGDL 548
Query: 531 VVKAVEEFKLSVYGDNYDEEGDVKVSE--ASRKRKAATENAAKECANYDWADLA---DKG 585
V++ EE + + + + A + E A+K + D+ +KG
Sbjct: 549 VIEWGEELEAQYRALEKSQPATSTLVKRPAPSAKGIKEEPASKRAKTEEPEDIKAFYEKG 608
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
L ++TV LK +L +H+L T+G+K L+ R+ H G
Sbjct: 609 TLNKLTVAVLKDFLTSHSLPTSGKKADLVERVEEHFG 645
>gi|324505765|gb|ADY42472.1| X-ray repair cross-complementing protein 5 [Ascaris suum]
Length = 617
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 175/648 (27%), Positives = 311/648 (47%), Gaps = 66/648 (10%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD-ETHFHIAVSCI 64
D F DDD E Y ++ K+ ++L+D +PKMF P ED + F A+ I
Sbjct: 3 DGEFDDDDLEGA---YLLSDSGKKCTIFLIDGAPKMFKKYEPDEDDDSVDCAFRRALKII 59
Query: 65 AQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI 124
L + + + AI F NT N +++ V V+ + DR +K+ D +
Sbjct: 60 RLQLVNKAVTSSEEYTAIVFINT--TNNSHNVDNVVVWQDVAQINADR-----VKQVDEL 112
Query: 125 EESFEKEIGSQYGIVSGSRENSLY-NALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS- 182
S +I S + + G Y + L++ + S K + LFTNE +PFGS
Sbjct: 113 LRS--DDILSTFTDICGGHGKCDYSDVLFLCIKRITTHSPMFQKKVVYLFTNESNPFGSS 170
Query: 183 ---IKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
I GAAKN A+D + G + PL +EEF + + + L+ D
Sbjct: 171 KQHITGAAKN---------AEDLRKHGAEFAIFPLLSKEEEFAFT--FNILEQLDAD--- 216
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRP-TVPGAITWL 298
+ + ++++ + +R +++R + I F ++N L + + Y+LIRP VP A+ L
Sbjct: 217 --VEKNCYNIGELEEDIPRRQYARRNISSIDFSLSNDLKLAVGIYSLIRPEKVPSAVA-L 273
Query: 299 DSVTNHPLKTERSFICADTG---ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLR 355
D+ +N ++ ++ TG L + R Q G + + +E+ +++R++ L
Sbjct: 274 DAESNEVVQRSFTYAKKQTGEEIPLFDKEITRRQEVGGAQVNMTAEEIEKLRRLTPPGLL 333
Query: 356 LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN- 414
L GFKP+S LK H++R S +V+P + ++ GST ++ L + + Y N
Sbjct: 334 LLGFKPISSLKLSHHVRSSQYVYPMESQITGSTRLYRTLLEVCENKKKIIICRYTQKENT 393
Query: 415 -PRLVALVAQ-------DEIVRAGGQVEPPGMHMIYLPYSDDIRPV-EELHSDTDAVPRA 465
P+LVALV Q D +A + PG H++YLP+ +D R + E++ P+A
Sbjct: 394 PPKLVALVPQSSSESVHDSKAKASDKFRYPGFHLVYLPFFEDKRDLSEQMFCHDGEWPKA 453
Query: 466 SDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP--DE 523
+ ++ A +++++ L ++ +F+NP +Q+HY V++A+AL+ D++ EI D+ P
Sbjct: 454 TQQQIDAARNVIRKLTL-NYHPEKFSNPVIQKHYKVIEAMALDLDEVSEIDDQIQPYFAH 512
Query: 524 EGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRK----AATENAAKECANYD-- 577
E ++ + K ++EF+ D+Y+ + +AS+ RK + E + YD
Sbjct: 513 EAFSK-RIKKELDEFRSLTLPDDYNPDA----KKASKGRKLDDTSGKEELKSKKMKYDDM 567
Query: 578 -WADLADKGKLKEMTVQELKLYL--MAHNLSTTGRKETLISRILTHMG 622
LA+ +LK +TV +LK +A ++ +K LI I G
Sbjct: 568 SLEQLANNHQLKSLTVSQLKTKAAEVAIPFKSSAKKSDLIEAIEQFFG 615
>gi|302667955|ref|XP_003025556.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
gi|291189670|gb|EFE44945.1| hypothetical protein TRV_00318 [Trichophyton verrucosum HKI 0517]
Length = 651
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 170/642 (26%), Positives = 303/642 (47%), Gaps = 58/642 (9%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQIINRLYDE 79
++++K+ V++ ++ S M T P + ++ + ++ +S ++ +II+ D
Sbjct: 24 YKSSKDAVLFAIEVSESML--TPPPDFKSKKADKDAPITAALKSAYHIMQQRIISNPQDM 81
Query: 80 VAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
+ + + T+ K + + + + LD P A +K+ + E E +
Sbjct: 82 MGVLLYGTKDSKFYDEDEEGRGTLPYPHCYLYTDLDVPAASDVKDLRALAED---EDSAA 138
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
++ ++ N L+ A + ++ + +R+ + T+ D+P + K +
Sbjct: 139 EILIPSEEPVTMANVLFCANQIFTSKAANFSSRRLFIITDNDNPHQNEKA-----LRSAA 193
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQKLED-- 251
RAKD DLG+ IEL P+S P EEF S FYAD+I D A P A K
Sbjct: 194 TVRAKDLYDLGVIIELFPISRPGEEFDRSKFYADIIYKASPTDPEAPAFPQAATKTATSG 253
Query: 252 -----MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPGAITWLDSV 301
+ + L + SK + +R F I GL I + Y + + P ++
Sbjct: 254 GDGITLLNSLISSINSKSVPRRALFSNVPLEIGPGLKISVTGYLIFKRQEPARSCYIWLA 313
Query: 302 TNHP-LKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTGHLRLHG 358
P + + AD A E + + YK GE + F+ +E +EI+ +R+ G
Sbjct: 314 GEQPQIAKGLTTQLADDSAREVEKWEIRKAYKFGGEQVSFTQEEQAEIRNFGEPTIRILG 373
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPLS L + +++ TF++PS++ VGST F ALH+++L+ + A+ ++ N P
Sbjct: 374 FKPLSSLPIWASMKHPTFLYPSEEGYVGSTRTFSALHQTLLKQKKMALVWFVPRRNAAPV 433
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ A++A +E + G Q PPGM ++ LP++DDIR E + T A D + K
Sbjct: 434 MAAMIAGEEKLDENGEQTIPPGMWILPLPFADDIRQNPETNHIT-----APDSLINKMRP 488
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEG------MA 527
+++ + L++ + ++ NPSLQ HY +LQALAL+ED E +D+T P + M
Sbjct: 489 IIRPLQLQNAQYDPQRYPNPSLQWHYKILQALALDEDLPEEPEDKTKPKYKAIDKANDMQ 548
Query: 528 RPG--VVKAVEEFKLSVYGDNYDEEGDVKVSE--ASRKRKAATENAAKECANYDWADLA- 582
R G V++ EE + + + + A + E A+K + D+
Sbjct: 549 RTGDLVIEWGEELEAQYRALEKSQPATSTLVKRPAPSAKGVKEEPASKRAKTEEPEDIKA 608
Query: 583 --DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
+KG L ++TV LK +L +H+L T+G+K L+ R+ H G
Sbjct: 609 YYEKGTLNKLTVAVLKDFLTSHSLPTSGKKADLVERVEEHFG 650
>gi|159482074|ref|XP_001699098.1| DNA binding protein [Chlamydomonas reinhardtii]
gi|158273161|gb|EDO98953.1| DNA binding protein [Chlamydomonas reinhardtii]
Length = 661
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 189/692 (27%), Positives = 295/692 (42%), Gaps = 124/692 (17%)
Query: 18 NEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLY 77
N Q EA KE +++L+DA +MF + + F +A ++ L+ +
Sbjct: 3 NALPQRPEALKEKLIFLIDAQTEMFEEIVVFGQPS--SSFDMARLTVSDLLRLKAWQHPD 60
Query: 78 DEVAICFFNTRKK----------------KNLQDLNAVFVFNVAEREQLDRPTARFIKEF 121
D++A+ +NTR+K +L V+ L RP+A ++
Sbjct: 61 DQMAVILYNTREKDQPNGSAEDGGGGGGGSSLVSFEGVYTL-----LDLQRPSAEAVRAV 115
Query: 122 -DHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKR---ILLFTNED 177
D E F+ E+GS G G R+ L +ALW AQ L G K+ADK I++F+N+
Sbjct: 116 RDFTAERFQTEVGSLPG--GGRRDGCLADALWRAQHCL--GGGKSADKSLNTIVVFSNDP 171
Query: 178 DPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKV-SHFYADMI----- 231
+P G + R + Q ++ L PL+ + + D++
Sbjct: 172 EPCGPATAPGFKAAVQQLRSRVEALQGYRAALRLFPLAAAARPWAPRGALWPDLLRALPG 231
Query: 232 ----------GLEGDDLALF---------------MPSAGQK----LEDMKDQLRKRMFS 262
G GDDL + +P G L + D R+R+
Sbjct: 232 PGEGEAEGEGGAVGDDLTMLRELAADAEAASQSGSLPGGGGAQQAVLNSLFDAFRRRLAR 291
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGA--ITWLDSVTNHPLKTERSFICADTGAL 320
KR + R+ + +++ +I + Y LI A +T + TN PLK S++ GAL
Sbjct: 292 KRTLMRLRWQLSDNAAISVRAYLLISDAAKAAKKMTPFNPTTNMPLKAVTSYVSVSDGAL 351
Query: 321 MQEP---AKR-FQPYKGENIKF-----SVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNL 371
+ P A+R F+ G + S E++E ++ L L GFKP S L+ +H
Sbjct: 352 LDRPTAAAQRVFELRTGNRARLPEVVASAPEVAEQAALAPSGLALLGFKPRSCLQLWHQT 411
Query: 372 RPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGG 431
R + F+ P ++ GST FIAL R+ML +R A+ P AL E
Sbjct: 412 RSALFLRPDERSAPGSTAAFIALWRAMLSQDRIAIC------RPVCAALPMASEA----- 460
Query: 432 QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI----------- 480
PGM++I+LP++DDIR E + +P DE + AAA
Sbjct: 461 ----PGMYLIHLPFADDIRQPEAVV----GLPNPPLDEAQVAAAAALMQALSLGGGSGQD 512
Query: 481 --------DLKDFSVCQFANPSLQRHYAVLQALALEE---DDMPEIKDETVPDEEGMARP 529
+ F Q NP LQRHY V+++LAL E + P+ D T+P E
Sbjct: 513 QAQDQAAAGVGVFDPSQVQNPWLQRHYTVVESLALSEPIPEWDPQRDDGTLPRRELWESE 572
Query: 530 GVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKE 589
AV+ F+ + + ++G K A+ R+A A+ DW L G LK+
Sbjct: 573 AAAAAVQAFR-----EAFPQQG-TKRKPAAATRQAKAAAASDAYDEVDWPSLLRSGGLKK 626
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ + ELK YL H L TG+K+ L+ R+ THM
Sbjct: 627 LKIDELKTYLRKHQLKLTGKKDELLDRVTTHM 658
>gi|238495310|ref|XP_002378891.1| DSB repair complex subunit Ku70, putative [Aspergillus flavus
NRRL3357]
gi|220695541|gb|EED51884.1| DSB repair complex subunit Ku70, putative [Aspergillus flavus
NRRL3357]
Length = 655
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 171/653 (26%), Positives = 310/653 (47%), Gaps = 80/653 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQ---TDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ ++ S M T P+ D +E+ A+ C ++ +II+ D +
Sbjct: 25 YKTVKDAVLFAIEVSDSML-TPRPSSDSKKPAEESPTTAALKCAYYLMQQRIISNPRDMI 83
Query: 81 AICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ + T+ K + DL+ + + LD P+A+ +K + + ++
Sbjct: 84 GVLLYGTQASKFYDEDENSRGDLSYPHCYLFTD---LDVPSAQEVKNLRALAQDGDE--- 137
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
S+ + + S+ N L+ A + + +R+ + T+ DDP G K +
Sbjct: 138 SKDVLKASGERVSMANVLFCANQIFTSKAPNFFSRRLFIVTDNDDPHGDNKS-----LRS 192
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDLALF 241
+ RAKD DLG++IEL P+S P EF + FY D+I L+ D A
Sbjct: 193 ASTVRAKDLYDLGVTIELFPISRPGHEFDTARFYDDIIYKASPSDPDAPAYLQTDSKA-- 250
Query: 242 MPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--A 294
P+ G + + + L + S+ + +R F + L I ++ Y L + P +
Sbjct: 251 SPATGDGIS-LLNTLLSNINSRSVPRRAQFSNIPLELGPNLKISVSGYLLFKRQAPARNS 309
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGH 353
WL +K + I DT +++ K+ + G+ + F+ +E+ ++
Sbjct: 310 FIWLGGEQPQIVKGVTTQIADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGDPV 369
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKPLS L + N++ +F++PS+++ VGST +F ALH+++LR + A+ ++
Sbjct: 370 IRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWFIARK 429
Query: 414 N--PRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDD 468
N P L A+VA +E + +G Q PPGM +I LP++DD+R P LH P D
Sbjct: 430 NASPVLGAMVAGEEKLDESGVQKFPPGMWIIPLPFADDVRQNPETTLH----VAPEPLID 485
Query: 469 EVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-A 527
+++ ++ + + ++ NPSLQ HY +LQALAL+ED + +D+T+P +
Sbjct: 486 QMRYIVQQLQ-LPKASYDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKTLPRYRQIDK 544
Query: 528 RPG--VVKAVEEF-----KLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC-----AN 575
R G V+ +E K+S +G V +++ R + E+AA++
Sbjct: 545 RTGDYVLSWADELEKQYAKISAHGPK-----STLVKRSAKDRTSEVEDAAQKPYKKVKVE 599
Query: 576 YDWADLAD-------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
D + D KG L ++TV LK +L AH S G+K L+ R+ ++
Sbjct: 600 TDEQGVEDVVRAHYQKGSLSKLTVPVLKDFLNAHGRSAAGKKADLVERVEEYL 652
>gi|317149552|ref|XP_003190337.1| ATP-dependent DNA helicase II subunit 1 [Aspergillus oryzae RIB40]
gi|121795552|sp|Q2MHH4.1|KU70_ASPOR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|85677424|dbj|BAE78501.1| Ku70 protein [Aspergillus oryzae]
Length = 655
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 171/653 (26%), Positives = 310/653 (47%), Gaps = 80/653 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQ---TDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ ++ S M T P+ D +E+ A+ C ++ +II+ D +
Sbjct: 25 YKTVKDAVLFAIEVSDSML-TPRPSSDSKKPAEESPTTAALKCAYYLMQQRIISNPRDMI 83
Query: 81 AICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ + T+ K + DL+ + + LD P+A+ +K + + ++
Sbjct: 84 GVLLYGTQASKFYDEDENSRGDLSYPHCYLFTD---LDVPSAQEVKNLRALAQDGDE--- 137
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
S+ + + S+ N L+ A + + +R+ + T+ DDP G K +
Sbjct: 138 SKDVLKASGERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDDPHGDNKS-----LRS 192
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDLALF 241
+ RAKD DLG++IEL P+S P EF + FY D+I L+ D A
Sbjct: 193 ASTVRAKDLYDLGVTIELFPISRPGHEFDTARFYDDIIYKASPSDPDAPAYLQTDSKA-- 250
Query: 242 MPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--A 294
P+ G + + + L + S+ + +R F + L I ++ Y L + P +
Sbjct: 251 SPATGDGIS-LLNTLLSNINSRSVPRRAQFSNIPLELGPNLKISVSGYLLFKRQAPARNS 309
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGH 353
WL +K + I DT +++ K+ + G+ + F+ +E+ ++
Sbjct: 310 FIWLGGEQPQIVKGVTTQIADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGDPV 369
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKPLS L + N++ +F++PS+++ VGST +F ALH+++LR + A+ ++
Sbjct: 370 IRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWFIARK 429
Query: 414 N--PRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDD 468
N P L A+VA +E + +G Q PPGM +I LP++DD+R P LH P D
Sbjct: 430 NASPVLGAMVAGEEKLDESGVQKFPPGMWIIPLPFADDVRQNPETTLH----VAPEPLID 485
Query: 469 EVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-A 527
+++ ++ + + ++ NPSLQ HY +LQALAL+ED + +D+T+P +
Sbjct: 486 QMRYIVQQLQ-LPKASYDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKTLPRYRQIDK 544
Query: 528 RPG--VVKAVEEF-----KLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC-----AN 575
R G V+ +E K+S +G V +++ R + E+AA++
Sbjct: 545 RTGDYVLSWADELEKQYAKISAHGPK-----STLVKRSAKDRTSEVEDAAQKPYKKVKVE 599
Query: 576 YDWADLAD-------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
D + D KG L ++TV LK +L AH S G+K L+ R+ ++
Sbjct: 600 TDEQGVEDVVRAHYQKGSLSKLTVPVLKDFLNAHGRSAAGKKADLVERVEEYL 652
>gi|194385986|dbj|BAG65368.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 245/484 (50%), Gaps = 28/484 (5%)
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +D
Sbjct: 9 SLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLRDT 63
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++R + KR
Sbjct: 64 GIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLRKVRAKETRKR 121
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQE 323
+ R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 122 ALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPS 181
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
K Q Y I +E E+KR L L GFKPL LK +H LRPS FV+P +
Sbjct: 182 DTKGSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESL 241
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHM 440
V+GS+ +F AL L A+ Y N P VALV Q +E+ QV PPG +
Sbjct: 242 VIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQL 301
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 302 VFLPFADDKRKM----PFTEKI-MATPEQVGKMKAIVEKLRF-TYRSDSFENPVLQQHFR 355
Query: 501 VLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV----S 556
L+ALAL+ + + D T+P E M + + V+EFK VY +Y+ EG V +
Sbjct: 356 NLEALALDLMEPEQAVDLTLPKVEAMNK-RLGSLVDEFKELVYPPDYNPEGKVTKRKHDN 414
Query: 557 EASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISR 616
E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 415 EGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEA 469
Query: 617 ILTH 620
+ H
Sbjct: 470 LTKH 473
>gi|367045694|ref|XP_003653227.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
gi|347000489|gb|AEO66891.1| hypothetical protein THITE_2115421 [Thielavia terrestris NRRL 8126]
Length = 645
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 175/664 (26%), Positives = 302/664 (45%), Gaps = 74/664 (11%)
Query: 1 MELDPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQTD---ETH 56
M DD R + +E + E + +++ K+ V++ +D S M PA D+ ++
Sbjct: 1 MAWGEDDDRRPEQDEGEEELDETDYKTQKDAVLFAIDVSKSMLQQP-PATDKKKGEKDSA 59
Query: 57 FHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA--------VFVFNVAERE 108
A+ C Q ++ +II + D + I F T K K + ++F
Sbjct: 60 VAAALKCAYQFMQQRIIAQPKDMMGILLFGTEKSKFRDEAGGRSGTGYPHCYLFT----- 114
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
LD P A +K+ + E E + +V + S+ N L+ A + ++ +
Sbjct: 115 DLDVPAAEDVKKLKALVEEGED---ADEVLVPSNEPASMANVLFCANQVFTTNAANFGSR 171
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
R+ + T+ D P G K A + RAKD DLG+ IEL P+S F VS FY
Sbjct: 172 RLFIITDNDSPHGKDKAA-----KSSAAVRAKDLYDLGVVIELFPISQGGSSFDVSKFYD 226
Query: 229 DMIGLE-----GDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLS 278
D+I + G + +G L + + L + SK+ KR + F +A G++
Sbjct: 227 DIIYRDPAAELGSPDEVKTSKSGDGLS-LLNSLISNINSKQTPKRAYFSNLPFELAPGIT 285
Query: 279 IELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENI 336
I + Y + P WL + E + +DT + + K+ + GE I
Sbjct: 286 ISVKGYMPLHRQQPARTCYVWLGGEQAQLAQGETIKVDSDTRTVDKSEVKKAYKFGGEYI 345
Query: 337 KFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHR 396
F +EL+ +K + LR+ GFKP S + + +++ S F+FPS+++ VGST +F AL +
Sbjct: 346 YFKPEELASLKNLGGKVLRVIGFKPRSSIPTWASVKKSIFIFPSEEDYVGSTRVFSALWQ 405
Query: 397 SMLRLNRFAVAFY--GNPSNPRLVALVAQ---DEIVRAGGQVEPPGMHMIYLPYSDDIRP 451
+L ++ +A++ +NP +VA++ DE +G P G+ + LP++DD+R
Sbjct: 406 KLLDADKVGLAWFVARQNANPIMVAIIPSRNPDEET-SGTPYLPAGLWLYPLPFADDVRN 464
Query: 452 VEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEE 509
VE A PR +D+ K +++ + L ++ ++ NPSLQ HY +LQA+ALEE
Sbjct: 465 VE-----LSAPPRPADELTDKMREIVQNLQLPKAMYNPLKYPNPSLQWHYKILQAMALEE 519
Query: 510 DDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATEN- 568
D + D T+P + K V + L+ + E+ + + KR+ E+
Sbjct: 520 DVPEGLDDATIPKYR-----QIDKRVGGY-LAEWKQMLAEKAGALMKSRAMKREVEDEDE 573
Query: 569 ---------------AAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
A +N ++G LK+MTV ELK L + +S G+K L
Sbjct: 574 GRPAAKRAKPAAKKAAGGHLSNAQLKAAFEQGTLKKMTVAELKDVLASKGVSAVGKKAEL 633
Query: 614 ISRI 617
+ ++
Sbjct: 634 VEKL 637
>gi|167522283|ref|XP_001745479.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775828|gb|EDQ89450.1| predicted protein [Monosiga brevicollis MX1]
Length = 1236
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 181/620 (29%), Positives = 286/620 (46%), Gaps = 79/620 (12%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++H+ ++ +++LVDAS +M Q ET IA SL + + +A
Sbjct: 678 EQHDGGRDCLIFLVDASQEM--------QQAFET--------IAASLDSDASSEAAPLMA 721
Query: 82 ICFF-NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS 140
I N + V + A R ++ I E D + + YG
Sbjct: 722 IPEIEGVDSSNNTYCETCLRVIHAALRSKI------LISEADLVSVVLYGTVVQLYG--- 772
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
L +ALW Q L + ++ A KRI++FTN D+P AA +D+ +A
Sbjct: 773 --NTFDLSDALWTCQNLFSRLKTRVATKRIMIFTNNDNPH-----AADDDLRDKAKVKAG 825
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE---GDD---LALFMPSAGQKLEDMKD 254
D +D G+ I L+ LS + F F+ ++ +E GDD ++ F+ D+ D
Sbjct: 826 DLRDNGVEIMLMDLSQNRDGFNKRLFWDEITSVERVAGDDDDGISRFL-----SFHDLLD 880
Query: 255 QLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFIC 314
+ R+ KR I +A G++I + Y L+ G +++ + T P+ T+ ++ C
Sbjct: 881 RTTSRVQKKRARMTIPLQLAEGMAIGVKVYNLVSQATKGKYSYVYNDTQ-PVVTKTAYYC 939
Query: 315 ADT-GALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRP 373
+T L+ K + E FS +E+++IK LRL GFK + LK +H+++
Sbjct: 940 ENTTNPLLPTDMKYGAKFGNEMAVFSKEEVTQIKSFGQPGLRLLGFKDQAALKPWHHVKK 999
Query: 374 STFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY----GNPSNPRLVALVAQDEIVR- 428
S F++P DK GS C LRL + A+ + G P P +VAL+ Q E V
Sbjct: 1000 SCFLYPDDK-AGGSRC---------LRLRKLAICLFVSRAGVP--PNMVALLPQAEKVAE 1047
Query: 429 -AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSV 487
+ QV PPG H+I+LPY++D+R E++ D D +P A D++K A L++ + K F
Sbjct: 1048 DSHEQVSPPGFHVIFLPYAEDLR---EVNVDFD-LPHADADQIKAATGLVRSLTHKHFQW 1103
Query: 488 CQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSV--YGD 545
NPSLQ H+ L+ALAL + E ++ VP + P +A E+F +V YG
Sbjct: 1104 HGVRNPSLQVHFNALEALALSRSKVEESVNDLVPS---IPEPA-AQAAEQFTQAVFPYG- 1158
Query: 546 NYDEEGDVKVSEASRKRKAATENAAKEC-ANYD-WADLADKGKLKEMTVQELKLYLMAHN 603
G K S AS A+ A E D +K +L +TV ELK+
Sbjct: 1159 --APSGSAKRSTASGGTGASKRTKADESEMTLDILKQKYEKDQLARLTVAELKVGCKLVG 1216
Query: 604 LSTTGRKETLISRILTHMGK 623
L GRK LIS + + G+
Sbjct: 1217 LKAAGRKADLISALQDYFGQ 1236
>gi|121795550|sp|Q2MHH3.1|KU70_ASPSO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|85677426|dbj|BAE78502.1| Ku70 protein [Aspergillus sojae]
Length = 655
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 172/653 (26%), Positives = 308/653 (47%), Gaps = 80/653 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQ---TDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ ++ S M T P+ D +E+ A+ C ++ +II+ D +
Sbjct: 25 YKTVKDAVLFAIEVSDSML-TPRPSSDSKKPAEESPTTAALKCAYHLMQQRIISNPRDMI 83
Query: 81 AICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ + T+ K + DL+ + + LD P+A+ +K + + ++
Sbjct: 84 GVLLYGTQASKFYDEDENSRGDLSYPHCYLFTD---LDVPSAQEVKNLRALAQDGDE--- 137
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
S+ + + S+ N L+ A + + +R+ + T+ DDP G K +
Sbjct: 138 SEDVLKASGERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDDPHGDNKS-----LRS 192
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDLALF 241
RAKD DLG++IEL P+S PD EF + FY D+I L+ D A
Sbjct: 193 AATVRAKDLYDLGVTIELFPISRPDHEFDTARFYDDIIYKASPSDPDAPAYLQTDSKA-- 250
Query: 242 MPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--A 294
P+ G + + L + S+ + +R F + I ++ Y L + P +
Sbjct: 251 SPATGDGISLLS-TLLSSINSRSVPRRAQFSNIPLELGPNFKISVSGYLLFKRQAPARNS 309
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGH 353
WL +K + I DT +++ K+ + G+ + F+ +E+ ++
Sbjct: 310 FIWLGGEQPQIVKGVTTQIADDTARTIEKWEIKKAYKFGGDQVAFTPEEMKSLRNFGDPV 369
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKPLS L + N++ +F++PS+++ VGST +F ALH+++LR + A+ ++
Sbjct: 370 IRIIGFKPLSALPFWANIKHPSFIYPSEEDFVGSTRVFSALHQTLLRDKKAALVWFIARK 429
Query: 414 N--PRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDD 468
N P L A+VA +E + +G Q PPGM +I LP++DD+R P LH P D
Sbjct: 430 NASPVLGAMVAGEEKLDESGVQKFPPGMWIIPLPFADDVRQNPETTLH----VAPEPLID 485
Query: 469 EVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-A 527
+++ ++ + + ++ NPSLQ HY +LQALAL+ED + +D+T+P +
Sbjct: 486 QMRYIVQQLQ-LPKASYDPFKYPNPSLQWHYRILQALALDEDLPEKPEDKTLPRYRQIDK 544
Query: 528 RPG--VVKAVEEF-----KLSVYGDNYDEEGDVKVSEASRKRKAATENAA-----KECAN 575
R G V+ +E K+S +G V +++ R + E+AA K
Sbjct: 545 RTGDYVLSWADELEKQYAKISAHGPK-----STLVERSAKDRTSEVEDAAPKPYKKVKVE 599
Query: 576 YDWADLAD-------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
D + D KG L ++TV LK +L AH S G+K+ L+ R+ ++
Sbjct: 600 TDEQGVEDVVRAPYQKGSLSKLTVPVLKNFLKAHGRSAAGKKKELVERVEEYL 652
>gi|336470968|gb|EGO59129.1| protein Ku70 [Neurospora tetrasperma FGSC 2508]
gi|350292044|gb|EGZ73239.1| protein Ku70 [Neurospora tetrasperma FGSC 2509]
Length = 645
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 178/658 (27%), Positives = 304/658 (46%), Gaps = 62/658 (9%)
Query: 1 MELDPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHF 57
M D+ R D +E D E + +++ K+ V++ +D S M D+ ++
Sbjct: 1 MSWRKDEDERLDGDEGDEELDENDYKTQKDAVLFAIDVSKSMLKPPQTTGDKKADKDSAL 60
Query: 58 HIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVF-NVAEREQLDRPTAR 116
A++C Q ++ +II++ D + + F T K K D + + + LD P A
Sbjct: 61 TAALTCAYQIMQQRIISQPRDMMGVLLFGTEKSKFRDDSGSGTGYPHCYLLSDLDIPGAE 120
Query: 117 FIKEFDHIEESFEKEIGSQYGIVSGSRENSLY-NALWVAQGLLRKGSSKTADKRILLFTN 175
+K+ + E E E I+ S+E + N L+ A + ++ +R+ + T+
Sbjct: 121 DVKKLKALVEDGEDEDE----IMVPSKEPVIMSNMLFCANQVFTTNAANFGSRRLFIVTD 176
Query: 176 EDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEG 235
DDP K A + RAKD DLG+ IEL P+S D++F +S FY D+I
Sbjct: 177 NDDPHAGDKQAKS-----SAAVRAKDLYDLGVVIELFPISREDKKFDLSKFYDDII--YR 229
Query: 236 DDLALFMPSAGQKLEDMKDQLR------KRMFSKRIVKR-----ISFIIANGLSIELNTY 284
D A S G K D L + SK+ KR + F +A GL+I + Y
Sbjct: 230 DPAAEAGQSEGPKTSKSGDGLTLLNSLISNINSKQTPKRSYFSNLPFELAPGLTISIKGY 289
Query: 285 ALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQE 342
+ P ++ + D A E ++ + YK GE+I F +E
Sbjct: 290 MPLTRQTPTRSCYVYEGEEQAQVVQSETAQVDFAARTVEKSELRKGYKFGGEHICFKPEE 349
Query: 343 LSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLN 402
L+E+K++ LR+ GFK S + + +++ S F+FPS+++ VGST +F AL + +L+ +
Sbjct: 350 LAELKQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDD 409
Query: 403 RFAVAFYGNPSN--PRLVALVAQ----DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELH 456
+ +A++ N P +VA+ DE A P G+ + LP++DD+R V+ +
Sbjct: 410 KVGIAWFVARENAHPVMVAIFPSGNPDDE--EANTPYLPAGLWLYPLPFADDVRSVDHVT 467
Query: 457 SDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPE 514
A PR +D+ + +++ + L + ++ NPSLQ HY +LQA AL+E+
Sbjct: 468 ----APPRPADELTDQMRQVIQNLQLPKAMYDPRRYPNPSLQWHYKILQAKALDEETPDA 523
Query: 515 IKDETVPD---------------EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEAS 559
I D T+P +E +A+ KA + + ++E+ + A
Sbjct: 524 IDDLTLPKYRQIDKRVGGYLAEWKEMLAK----KANDLQNTRAFKREFEEDDERPAKRAK 579
Query: 560 RKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+KAA+ +N D ++G L +MTV ELK + + +ST GRK L R+
Sbjct: 580 PSKKAASGGGGPANSNADLKKAFEQGTLGKMTVAELKDIMASKGISTAGRKAELAERL 637
>gi|432921799|ref|XP_004080229.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Oryzias
latipes]
Length = 548
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 247/497 (49%), Gaps = 35/497 (7%)
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
GS E SL +ALW L + + KR+++FT D+P +AK+ RT +A
Sbjct: 71 GSGEASLGDALWCCANLYSDIKLRLSHKRLMIFTCRDEPHWG--DSAKDRQART---KAS 125
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDD--LALFMPSAGQKLEDMKDQLRK 258
D ++ G+ I+L+ L P F VS F+ D+I D+ L L M G KLED++ ++R
Sbjct: 126 DLKETGVVIDLMHLLKPGG-FDVSAFFCDIISPPEDEEELGLQMEPCG-KLEDLRKRVRA 183
Query: 259 RMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADT 317
+ KR + R+S + G+++ + YA L TN P++++ R+F
Sbjct: 184 KELKKRTLARLSLSLGEGVNVAVGLYATAVSARKPPPVRLYRETNEPVRSKTRTFHTQTG 243
Query: 318 GALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFV 377
L+ K+ Q Y + I E+ IK+ L L GFKP+ LK +H++RPS F+
Sbjct: 244 SLLLPSDIKKAQVYAKKQIVMERDEVDAIKKFDDPGLVLIGFKPMEKLKLHHHIRPSVFL 303
Query: 378 FPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVE 434
+P ++EV GS C+F AL + + FA+ N PR VALV Q +E+ A Q+
Sbjct: 304 YPEEEEVKGSACLFTALLKRCSDRSVFALCRCIPRRNFPPRFVALVPQKEEVDEANAQIS 363
Query: 435 PPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPS 494
P G ++IYLP++DD R + D P AS +V K ++ ++ K + F NP
Sbjct: 364 PAGFNVIYLPFADDFRTL-----DLPRCPYASQMQVNKMKEIISKLRFK-YRSDAFENPV 417
Query: 495 LQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV 553
+Q+H+ L+ALAL+ EI+D +P E + R G + V+EFK VY +Y+ E
Sbjct: 418 IQKHFRNLEALALDMVAPEEIEDLIMPKVEQIDQRLGPL--VQEFKDLVYPADYNPE--- 472
Query: 554 KVSEASRKRKAATENAAK-------ECANYDWADLADKGKLKEMTVQELKLYLMAHNLST 606
++ + KRK A A E + G L ++TV LK + T
Sbjct: 473 --TKPAAKRKTADAGAGASEKKPKVELTEDELRAHVLNGTLGKLTVPVLKDACKQFGVRT 530
Query: 607 T-GRKETLISRILTHMG 622
T +K+ L+ + + +G
Sbjct: 531 TVTKKQELMDVLTSRLG 547
>gi|440633573|gb|ELR03492.1| hypothetical protein GMDG_01243 [Geomyces destructans 20631-21]
Length = 644
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 179/628 (28%), Positives = 299/628 (47%), Gaps = 51/628 (8%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTD---ETHFHIAVSCIAQSLKTQIINRLYDEV 80
+++ K+ +++ ++ SP M T PA D ++ A+ C Q ++ +II+ D +
Sbjct: 27 YKSQKDAILFAIEVSPSML-THPPASDSKKADTDSPAAAALKCAYQIMQQRIISNPKDMI 85
Query: 81 AICFFNTRKKKNLQD--LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGI 138
I F T + K +D + + ++ LD P A +K ++E E E ++ +
Sbjct: 86 GILLFGTAESKGPEDNAASGIAYPHIYLLTDLDVPAASDVK---ALKELVEDEEAAKEVL 142
Query: 139 VSG--SRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
V E ++ N L+ A + + +R+ + T+ DDP S KG M
Sbjct: 143 VPAPEGAEVTMSNVLFCANQIFTTRAPSFGSRRLFMITDRDDPHESDKG-----MRAAAA 197
Query: 197 QRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPSAGQKLEDMK 253
RAKD DLG+ IEL P+ F S FY D+I + D + +AG +
Sbjct: 198 VRAKDLYDLGVVIELFPIERGGAVFDRSKFYDDVIYRDSTDTDTPSTTNAAAGADGISLL 257
Query: 254 DQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPL 306
+ L + SK+I KR + F I GL+I + Y +++ P WL T
Sbjct: 258 NSLISNINSKQIPKRALFSNLPFEIGPGLTISVKGYNILQRQKPARSCYVWLSGETAQIA 317
Query: 307 KTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365
E + + ADT +Q+ K+ + GE + F+ E E+K LR+ GFKP + L
Sbjct: 318 TGETTHLAADTTRTVQKVDVKKAYKFGGEQVLFTKDEQKELKNFGPPGLRIVGFKPQTLL 377
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY---GNPSNPRLVALVA 422
Y ++ STF++PS+++ VGST +F L + +L + VA+Y N +NP+ +AL+
Sbjct: 378 PYYASVNKSTFLYPSEEDYVGSTRVFATLWQKLLDSSTMGVAWYIPRAN-ANPQYIALLP 436
Query: 423 QDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
E + Q+ P G+ LP +DD+R V P A D K +++++
Sbjct: 437 SRERLDPATSQQIVPAGLWAYPLPCADDLR-VPAPGPAPIVSPNALTD---KMHVVIQQL 492
Query: 481 DLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIK---DETVPDEEGM---ARPGVV 532
L F ++ NP+LQ HY +LQA+ALEE ++PE+ D+T+P + A P VV
Sbjct: 493 QLPGAVFEPSRYPNPALQWHYRILQAIALEE-EVPELAAGDDKTLPKGRQIDKRAGPYVV 551
Query: 533 ---KAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKE 589
+A+EE L V + E+ +V + A ++ + KE + LA +G++
Sbjct: 552 DWGRALEEEWLEV-AEGKGEKLEVGMKRAGEAKEGKVKR-VKESGLDEVERLAKEGRVGS 609
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRI 617
TV LK +L A L+ G+K L+ R+
Sbjct: 610 ATVVMLKDWLAARGLNVGGKKGELVERV 637
>gi|119479761|ref|XP_001259909.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
gi|119408063|gb|EAW18012.1| DSB repair complex subunit Ku70, putative [Neosartorya fischeri
NRRL 181]
Length = 654
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 173/648 (26%), Positives = 312/648 (48%), Gaps = 70/648 (10%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++A K+ V++ ++ S M T P+ D + +E+ A+ C ++ +II+ D +
Sbjct: 24 YKAVKDAVLFAIEVSDSML-TPRPSSDPKKRVEESPTTAALKCAYHLMQQRIISNPRDMI 82
Query: 81 AICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ + T+ K + DL+ + + LD P+AR +KE + E + G
Sbjct: 83 GVLLYGTQASKFYDEDENSRGDLSYPHCYLFTD---LDVPSAREVKELRALAE----DEG 135
Query: 134 SQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
++ S+E S+ N L+ A + + +R+ + T+ D+P G +K+ +
Sbjct: 136 KARDVLVPSKERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD----SKSQRS 191
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----------GLEGDDLALFM 242
T+ RAKD DLG++IEL P+S P+ EF S FY D+I + D +
Sbjct: 192 AATV-RAKDLYDLGVTIELFPISQPEHEFDSSKFYDDIIYKTSPTDAEAPVYLKDDSKVS 250
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AI 295
++G + + + L + S+ + +R F + I + Y L + P
Sbjct: 251 TASGDGIS-LLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYLLFKRQAPARSCY 309
Query: 296 TWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGEN--IKFSVQELSEIKRVSTGH 353
WL +K + I DT +++ R + YK N + F+ +E ++
Sbjct: 310 VWLGGEKPQIVKGVTTQIADDTARTVEKSEIR-KAYKFGNDQVSFTPEEQKALRHFGDPV 368
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKPLS L + N++ F++PS+++ VGST +F ALH+ +L+ ++ A+ ++
Sbjct: 369 IRIIGFKPLSALPFWANVKHPFFIYPSEEDYVGSTRVFSALHQKLLKDHKMALVWFIPRK 428
Query: 414 N--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEV 470
N P L A++A +E V G Q PPGM +I LPY+DD+R E+ + P D++
Sbjct: 429 NAAPVLGAMIAGEEKVDENGVQKFPPGMWIIPLPYADDVRQNPEM--TLNVAPEPLIDQM 486
Query: 471 KKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-A 527
+ +++++ L + ++ NPSLQ HY +LQALAL+ED + +D+T+P +
Sbjct: 487 R---TIVQQLQLPKASYEPQKYPNPSLQWHYRILQALALDEDLPEKPEDKTIPKYRQIDK 543
Query: 528 RPG--VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAA-------KECANYDW 578
R G V+ +E + V +++ R A ++ A+ K + +
Sbjct: 544 RAGEYVLSWADELEKQYAAPAAHGPKSTLVKRSAKDRAADSDEASSHPSKRIKSESGPEG 603
Query: 579 ADLA-----DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
D+ +KG L ++TV LK +L AH ST G+K L+ R+ +M
Sbjct: 604 VDVEVRLHYEKGSLSKLTVAVLKDFLTAHGRSTAGKKADLMERVEEYM 651
>gi|212530704|ref|XP_002145509.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
gi|210074907|gb|EEA28994.1| DSB repair complex subunit Ku70, putative [Talaromyces marneffei
ATCC 18224]
Length = 653
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 169/658 (25%), Positives = 305/658 (46%), Gaps = 68/658 (10%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD-ETHFHIAVSCI 64
D+ ++++D+E D+ Y+ + K+ V++ +D S M P + + ++ A+ C
Sbjct: 10 DENYQEEDDEVDDSGYK---SVKDAVLFAIDISDSMLEVRPPESGKGEPQSPAKAAIKCA 66
Query: 65 AQSLKTQIINRLYDEVAICFFNTRKKKNL-QDLNA--------VFVFNVAEREQLDRPTA 115
++ +II+ D + + FF T K +D N+ ++F LD P A
Sbjct: 67 YHLMQQRIISNPKDMMGVLFFGTEASKFYDEDENSRGGLSYPHCYLFT-----DLDVPDA 121
Query: 116 RFIKEFDHIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFT 174
+K + E ++E I+ S+E S+ N L+ A + +S +R+ + T
Sbjct: 122 NDVKSLRALAEDDDEETE----ILKPSKERVSMANVLFCANQIFASKASNFLSRRLFIIT 177
Query: 175 NEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--G 232
+ D+P + M RAKD DLG+ IEL P+S PD EF S FY D++
Sbjct: 178 DSDNPH-----SEDRTMRSAATVRAKDLYDLGVIIELFPISKPDHEFDRSKFYDDIVYKT 232
Query: 233 LEGDDLALFMPSAGQKLEDMKD-----------QLRKRMFSKRIVKRISFIIANGLSIEL 281
GD A +AG ++ + + R +R + +I + I +
Sbjct: 233 APGDPEASAFTAAGTQVPNASGDGISLLNSLLSSVNSRSVPRRALFKIPLEFSPNFKISV 292
Query: 282 NTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQ--EPAKRFQPYKGENIK 337
Y + + P WL K + I DT ++ E K ++ + GE +
Sbjct: 293 TGYLIFKRQEPSRSCYVWLGGEKPALAKGTTTQIADDTARTIEKTEIQKAYK-FGGEQVS 351
Query: 338 FSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRS 397
F+++E ++++ +R+ GFKP S L + + + TF++P++ E VGST +F ALH+
Sbjct: 352 FTIEEQAKLRNFGDPVIRIIGFKPRSSLPIWASTKHPTFIYPNEDEFVGSTRVFAALHQK 411
Query: 398 MLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEE 454
+L+ + + ++ N P L A++ +E + G Q PPG+ ++ LP++DDIR +
Sbjct: 412 LLQDEKIGLVWFIPRKNATPVLAAMLPGEEKLDDNGVQFLPPGLWILPLPFADDIR--QN 469
Query: 455 LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPE 514
++ P D ++ ++ + + ++ NPSLQ HY +LQALAL+E+ +
Sbjct: 470 PETNLVVAPEPLIDHMRTVVQQLQ-LPKAHYDPRKYPNPSLQWHYRILQALALDEELPEQ 528
Query: 515 IKDETVPDEEGM-ARPG--VVKAVEEFKLSVYGDNYDEEGDVK------------VSEAS 559
+D+T+P + + R G V++ EE + Y + Y + V+E
Sbjct: 529 AEDKTIPKYKQIDKRAGDYVLEWGEELE-KQYQNMYTNQPKTSTLAKRGKPSYEPVAEDK 587
Query: 560 RKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+K TENA A+ + G L ++TV LK +L LS +G+K L+ R+
Sbjct: 588 PAKKVKTENANGGNASAEVQSHYRSGSLSKLTVAVLKEFLTEKQLSVSGKKADLVERV 645
>gi|326483178|gb|EGE07188.1| Ku70 protein [Trichophyton equinum CBS 127.97]
Length = 668
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 306/659 (46%), Gaps = 75/659 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQIINRLYDE 79
++++K+ V++ ++ S M T P ++ + ++ +S ++ +II+ D
Sbjct: 24 YKSSKDAVLFAIEVSESML--TPPPISKSKKADKDAPITAALKSAYHIMQQRIISNPQDM 81
Query: 80 VAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
+ + + T+ K + + + + LD P A +K+ + E E +
Sbjct: 82 MGVLLYGTKNSKFYDEDEEGRGTLPYPHCYLYTDLDVPAASDVKDLRALAED---EDSAA 138
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
++ ++ N L+ A + ++ + +R+ + T+ D+P + K +
Sbjct: 139 EILIPSEEPVTMANVLFCANQIFTSKAANFSSRRLFIITDNDNPHQNEKA-----LRSAA 193
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQKLED-- 251
RAKD DLG+ IEL P+S P EEF S FYAD+I D A P K
Sbjct: 194 TVRAKDLYDLGVIIELFPISRPGEEFDRSKFYADIIYKASPTDPEAPAFPQVATKTSTTG 253
Query: 252 -----MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITWLD 299
+ + L + SK + +R F I GL I + Y + + P WL+
Sbjct: 254 GDGITLLNSLISSINSKSVPRRALFSNVPLEIGPGLKISVTGYLIFKRQEPSRSCYIWLE 313
Query: 300 SVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
K + + D+ +++ ++ + GE I F+ +E +EI+ +R+ G
Sbjct: 314 GEQPQIAKGMTTQLADDSAREVEKWEIRKAYKFGGEQISFTQEEQAEIRNFGEPTIRILG 373
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPLS L + +++ TF++PS++ VGST F ALH+++L+ ++ A+ ++ N P
Sbjct: 374 FKPLSSLPIWASMKHPTFLYPSEEGYVGSTRTFSALHQTLLKQSKMALVWFVPRRNAAPV 433
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ A++A +E + G Q PPGM ++ LP++DDIR E + T A D + K
Sbjct: 434 MAAMIAGEEKLDENGEQTIPPGMWILPLPFADDIRQNPETNHIT-----APDSLINKMRP 488
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVK 533
+++++ L++ + ++ NPSLQ HY +LQALAL+ED E +D+T P + + + V
Sbjct: 489 IIRQLQLQNAQYDPQRYPNPSLQWHYKILQALALDEDLPEEPEDKTKPKYKAIDKVDDVS 548
Query: 534 --AVEEFKLSVYGDNYDEEGDVKVS---------EASRKRKAAT---------------- 566
A F ++ GD+ + A K + AT
Sbjct: 549 APAPRNFLERHQANDMQRTGDLVIEWGEELEAQYRALEKSQPATSTLVKRPAPSAKGIKE 608
Query: 567 ENAAKECANYDWADLA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
E A+K + D+ +KG L ++TV LK +L +H+L T+G+K L+ R+ H G
Sbjct: 609 EPASKRAKTEEPEDIKAFYEKGTLNKLTVAVLKDFLTSHSLPTSGKKADLVERVEEHFG 667
>gi|161789038|sp|Q7SA95.2|KU70_NEUCR RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=Protein mus-51
Length = 645
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 171/649 (26%), Positives = 303/649 (46%), Gaps = 62/649 (9%)
Query: 10 RDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQTD-----ETHFHIAVSC 63
R D +E D E + +++ K+ V++ +D S M P ++ D ++ A++C
Sbjct: 10 RLDGDEGDEELDENDYKTQKDAVLFAIDVSKSMLK---PPQNTGDKKADKDSALTAALTC 66
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNLQDL-NAVFVFNVAEREQLDRPTARFIKEFD 122
Q ++ +II++ D + + F T K K D N + LD P A +K+
Sbjct: 67 AYQIMQQRIISQPKDMMGVLLFGTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLK 126
Query: 123 HIEESFEKEIGSQYGIVSGSRENSLY-NALWVAQGLLRKGSSKTADKRILLFTNEDDPFG 181
+ E + E I+ S+E + N L+ A + ++ +R+ + T+ DDP
Sbjct: 127 ALIEDGDDEDE----IMVPSKEPVIMSNMLFCANQVFTTNAANFGSRRLFIVTDNDDPHA 182
Query: 182 SIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI-----GLEGD 236
K A + RAKD DLG+ IEL P+S D++F +S FY D+I G
Sbjct: 183 GDKQA-----KSSAAVRAKDLYDLGVVIELFPISREDKKFDLSKFYDDIIYRNPAAEAGQ 237
Query: 237 DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTV 291
+ +G L + + L + SK+ KR + F +A GL+I + Y +
Sbjct: 238 SESPKTSKSGDGLT-LLNSLISNINSKQTPKRSYFSNLPFELAPGLTISIKGYMPLNRQT 296
Query: 292 PGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV 349
P ++ + D A E ++ + YK GE+I F +EL+E+K++
Sbjct: 297 PTRSCYVYEGEEQAQVVQSETAQVDFAARTVEKSELRKGYKFGGEHICFKPEELAELKQM 356
Query: 350 STGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY 409
LR+ GFK S + + +++ S F+FPS+++ VGST +F AL + +L+ ++ +A++
Sbjct: 357 GKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIAWF 416
Query: 410 GNPSN--PRLVALV--AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRA 465
N P +VA+ + A P G+ + LP++DD+R V+ + A PR
Sbjct: 417 VARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVRSVDHVT----APPRP 472
Query: 466 SDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD- 522
+D+ + +++ + L + ++ NPSLQ HY +LQA AL+E+ + D T+P
Sbjct: 473 ADELTDQMRQVIQNLQLPKAMYDPRKYPNPSLQWHYKILQAKALDEETPDAMDDVTLPKY 532
Query: 523 --------------EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATEN 568
+E +A+ KA + + ++E+ + A +KAA+
Sbjct: 533 RQIDKRVGGYLAEWKEMLAK----KANDLQNTRAFKREFEEDDERPAKRAKPSKKAASGG 588
Query: 569 AAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+N D ++G L +MTV ELK + + +ST GRK L+ R+
Sbjct: 589 GGPANSNADLKKAFEQGTLGKMTVAELKDIMASKGISTAGRKAELVERL 637
>gi|164423551|ref|XP_962503.2| hypothetical protein NCU08290 [Neurospora crassa OR74A]
gi|157070143|gb|EAA33267.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 647
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 169/639 (26%), Positives = 296/639 (46%), Gaps = 67/639 (10%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTTCPAEDQTD-----ETHFHIAVSCIAQSLKTQIINRL 76
Q+++ K+ V++ +D S M P ++ D ++ A++C Q ++ +II++
Sbjct: 25 QDYKTQKDAVLFAIDVSKSMLK---PPQNTGDKKADKDSALTAALTCAYQIMQQRIISQP 81
Query: 77 YDEVAICFFNTRKKKNLQDL-NAVFVFNVAEREQLDRPTARFIKEFDHIEESF--EKEIG 133
D + + F T K K D N + LD P A +K+ + E E EI
Sbjct: 82 KDMMGVLLFGTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKKLKALIEDGDDEDEI- 140
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
+V + N L+ A + ++ +R+ + T+ DDP K A
Sbjct: 141 ----MVPSKEPVIMSNMLFCANQVFTTNAANFGSRRLFIVTDNDDPHAGDKQA-----KS 191
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI-----GLEGDDLALFMPSAGQK 248
+ RAKD DLG+ IEL P+S D++F +S FY D+I G + +G
Sbjct: 192 SAAVRAKDLYDLGVVIELFPISREDKKFDLSKFYDDIIYRNPAAEAGQSESPKTSKSGDG 251
Query: 249 LEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAITWLDSVTN 303
L + + L + SK+ KR + F +A GL+I + Y + P ++
Sbjct: 252 LT-LLNSLISNINSKQTPKRSYFSNLPFELAPGLTISIKGYMPLNRQTPTRSCYVYEGEE 310
Query: 304 HPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTGHLRLHGFKP 361
+ D A E ++ + YK GE+I F +EL+E+K++ LR+ GFK
Sbjct: 311 QAQVVQSETAQVDFAARTVEKSELRKGYKFGGEHICFKPEELAELKQMGKKTLRIIGFKK 370
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVA 419
S + + +++ S F+FPS+++ VGST +F AL + +L+ ++ +A++ N P +VA
Sbjct: 371 RSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGIAWFVARENAHPVMVA 430
Query: 420 LVAQ----DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ DE A P G+ + LP++DD+R V+ + A PR +D+ +
Sbjct: 431 IFPSGNPDDE--EANTPYLPAGLWLYPLPFADDVRSVDHVT----APPRPADELTDQMRQ 484
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD----------- 522
+++ + L + ++ NPSLQ HY +LQA AL+E+ + D T+P
Sbjct: 485 VIQNLQLPKAMYDPRKYPNPSLQWHYKILQAKALDEETPDAMDDVTLPKYRQIDKRVGGY 544
Query: 523 ----EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDW 578
+E +A+ KA + + ++E+ + A +KAA+ +N D
Sbjct: 545 LAEWKEMLAK----KANDLQNTRAFKREFEEDDERPAKRAKPSKKAASGGGGPANSNADL 600
Query: 579 ADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
++G L +MTV ELK + + +ST GRK L+ R+
Sbjct: 601 KKAFEQGTLGKMTVAELKDIMASKGISTAGRKAELVERL 639
>gi|46401618|dbj|BAD16622.1| MUS51 [Neurospora crassa]
Length = 645
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 172/652 (26%), Positives = 301/652 (46%), Gaps = 68/652 (10%)
Query: 10 RDDDEESDNEFYQE---HEATKEYVVYLVDASPKMFSTTCPAEDQTD-----ETHFHIAV 61
R D +E D E + H++T +V++ +D S M P ++ D ++ A+
Sbjct: 10 RLDGDEGDEELDENVSYHQST--HVLFAIDVSKSMLK---PPQNTGDKKADKDSALTAAL 64
Query: 62 SCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDL-NAVFVFNVAEREQLDRPTARFIKE 120
+C Q ++ +II++ D + + F T K K D N + LD P A +K+
Sbjct: 65 TCAYQIMQQRIISQPKDMMGVLLFGTEKSKFRDDSGNGTGYPHCYLLSDLDIPGAEDVKK 124
Query: 121 FDHIEESF--EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDD 178
+ E E EI +V + N L+ A + ++ +R+ + T+ DD
Sbjct: 125 LKALIEDGDDEDEI-----MVPSKEPVIMSNMLFCANQVFTTNAANFGSRRLFIVTDNDD 179
Query: 179 PFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI-----GL 233
P K A + RAKD DLG+ IEL P+S D++F +S FY D+I
Sbjct: 180 PHAGDKQAKS-----SAAVRAKDLYDLGVVIELFPISREDKKFDLSKFYDDIIYRNPAAE 234
Query: 234 EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIR 288
G + +G L + + L + SK+ KR + F +A GL+I + Y +
Sbjct: 235 AGQSESPKTSKSGDGLT-LLNSLISNINSKQTPKRSYFSNLPFELAPGLTISIKGYMPLN 293
Query: 289 PTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEI 346
P ++ + D A E ++ + YK GE+I F +EL+E+
Sbjct: 294 RQTPTRSCYVYEGEEQAQVVQSETAQVDFAARTVEKSELRKGYKFGGEHICFKPEELAEL 353
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
K++ LR+ GFK S + + +++ S F+FPS+++ VGST +F AL + +L+ ++ +
Sbjct: 354 KQMGKKTLRIIGFKKRSKIPSWASVKKSIFIFPSEEQYVGSTRVFSALWQKLLKDDKVGI 413
Query: 407 AFYGNPSN--PRLVALV--AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAV 462
A++ N P +VA+ + A P G+ + LP++DD+R V+ + A
Sbjct: 414 AWFVARENAHPVMVAIFPSGNPDDEEANTPYLPAGLWLYPLPFADDVRSVDHVT----AP 469
Query: 463 PRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
PR +D+ + +++ + L + ++ NPSLQ HY +LQA AL+E+ + D T+
Sbjct: 470 PRPADELTDQMRQVIQNLQLPKAMYDPRKYPNPSLQWHYKILQAKALDEETPDAMDDVTL 529
Query: 521 PD---------------EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
P +E +A+ KA + + ++E+ + A +KAA
Sbjct: 530 PKYRQIDKRVGGYLAEWKEMLAK----KANDLQNTRAFKREFEEDDERPAKRAKPSKKAA 585
Query: 566 TENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ +N D ++G L +MTV ELK + + +ST GRK L+ R+
Sbjct: 586 SGGGGPANSNADLKKAFEQGTLGKMTVAELKDIMASKGISTAGRKAELVERL 637
>gi|367022532|ref|XP_003660551.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
gi|347007818|gb|AEO55306.1| hypothetical protein MYCTH_2298998 [Myceliophthora thermophila ATCC
42464]
Length = 645
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 166/657 (25%), Positives = 300/657 (45%), Gaps = 60/657 (9%)
Query: 1 MELDPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI 59
M + DD R D +E + E + +++ K+ V++ +D S M + + + I
Sbjct: 1 MAWEGDDDRRPDSDEGEEELDEADYKTQKDAVLFAIDVSSSMLQQPVATDSKKADKDSAI 60
Query: 60 --AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA--------VFVFNVAEREQ 109
A+ C Q ++ +II + D + I F T K K + ++
Sbjct: 61 TAALKCAYQFMQQRIIAQPKDMMGILLFGTEKSKFRDEAGGRSGSGYPHCYLLT-----D 115
Query: 110 LDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKR 169
LD PTA +K + E E G +V S+ N L+ A + + +R
Sbjct: 116 LDVPTAEDVKSLKALVEEGEDPDGV---LVPAKEPASMANVLFCANQVFTTNAPNFGSRR 172
Query: 170 ILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYAD 229
+ + T++D P G+ K A + RAKD DLG+ IEL P+S ++F ++ FY D
Sbjct: 173 LFIITDDDSPHGNDKAA-----KSSAAVRAKDLYDLGVVIELFPISHGGKDFDMAKFYDD 227
Query: 230 MIGLEGDDLALFM-----PSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSI 279
++ + A F+ +G + + + L + SK+ KR + F +A L+I
Sbjct: 228 IVYRDPAAEAGFVDRVKTSKSGDGIS-LLNSLISNINSKQTPKRAYFSNLHFELAPNLTI 286
Query: 280 ELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIK 337
+ Y + P WL ++E + + T + + K+ + GE I
Sbjct: 287 SVKGYLPLHRQQPARTCYVWLGGERAQLAQSETVRVDSTTRTVDKSEVKKAYKFGGEYIY 346
Query: 338 FSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRS 397
F +E + +K + + LRL GFKP S L + +++ S F+FPS++ VGST +F AL +
Sbjct: 347 FKPEEAAALKNLGSKVLRLIGFKPRSLLPMWASVKKSIFIFPSEEHYVGSTRVFSALWQK 406
Query: 398 MLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVE--PPGMHMIYLPYSDDIRPVE 453
+L ++ +A++ N P +VA++ + + P G+ + LP++DD+R V
Sbjct: 407 LLEADKVGIAWFVARENAHPSMVAIIPSRALDDGSSETPYLPAGLWLYPLPFADDVRNV- 465
Query: 454 ELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDD 511
D PR +D+ + +++ + L ++ ++ NPSLQ HY VLQA+AL+ED
Sbjct: 466 ----DLTMPPRPADELTDRMRQIVQNLQLPKAMYNPSKYPNPSLQWHYKVLQAMALDEDV 521
Query: 512 MPEIKDETVPDEEGMARPGVVKAVEEFK----------LSVYGDNYDEEGDVKVSEASRK 561
+ D T+P + + V + E+K + + E D A+++
Sbjct: 522 PDSLDDATIPKYRQIDK-RVGGYLVEWKEVLAEKANALMKSRAVKRESEDDGGERPAAKR 580
Query: 562 RKAATENAAK-ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
K A + A + + +N ++ LK+MTV EL+ L + +S G+K L+ ++
Sbjct: 581 TKVAPKKADRGQMSNAQLRTALEQDTLKKMTVAELRDILASKGISAVGKKADLVEKL 637
>gi|242817824|ref|XP_002487023.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713488|gb|EED12912.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 654
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 169/666 (25%), Positives = 310/666 (46%), Gaps = 83/666 (12%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETH--FHIAVSC 63
DD+++++DEE D+ Y+ + K+ +++ +D S M P+E + A+ C
Sbjct: 10 DDIYQEEDEEVDDSGYK---SVKDAILFAIDISDSMLMDR-PSESNKGQPQSPAKAAIKC 65
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNL-QDLNAV--------FVFNVAEREQLDRPT 114
++ +II+ D + + F+ T + +D N+ ++F L+ P
Sbjct: 66 AYHLMQQRIISNPKDMMGVLFYGTEASRFYDEDENSCGGLSYPHCYLFT-----DLEVPD 120
Query: 115 ARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFT 174
A +K + E ++ ++ +VS S+ N L+ A + +S +R+ + T
Sbjct: 121 ANDVKSLRALAEDDDE---AEQILVSSKERVSMANVLFCANQIFTSKASNFLSRRLFIIT 177
Query: 175 NEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--G 232
+ D+P A M RAKD DLG+ IEL P+S PD EF S FY D+I
Sbjct: 178 DSDNPH-----ADDRTMRSAATVRAKDLYDLGVIIELFPISRPDHEFDRSKFYDDIIYKT 232
Query: 233 LEGDDLALFMPSAGQKLEDMKD-----------QLRKRMFSKRIVKRISFIIANGLSIEL 281
GD A +AG ++ + + R +R + +I + I +
Sbjct: 233 APGDPEASAFTAAGTQVPNASGDGISLLNSLLSSVNSRSVPRRALFKIPLEFSPDFKISV 292
Query: 282 NTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIK 337
Y + + P WL K + + DT +++ R + YK GE I
Sbjct: 293 TGYLIFKRQEPSRSCYVWLGGEKPELAKGTTTHVADDTARTVEKGEIR-KAYKFGGEQIS 351
Query: 338 FSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRS 397
F+ +E ++++ +R+ GFKP S L + +++ TF++PS+ E VGST +F ALH+
Sbjct: 352 FTAEEQAKLRNFGDPVIRIIGFKPRSSLPIWASIKHPTFIYPSEDEFVGSTRVFSALHQK 411
Query: 398 MLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEE 454
+L+ + + ++ N P L A++A +E + G Q PPG+ ++ LP++DDIR +
Sbjct: 412 LLKDEKIGIVWFIARKNATPVLAAMLAGEEKLDDNGVQFLPPGLWILPLPFADDIR--QN 469
Query: 455 LHSDTDAVPRASDDEVKKAAALMKRIDL--KDFSVCQFANPSLQRHYAVLQALALEEDDM 512
++ P D ++ +++++ L + ++ NP+LQ HY +LQALAL+E+
Sbjct: 470 PETNLVVAPEPLIDHMR---TIVQQLQLPKAQYDPRKYPNPALQWHYRILQALALDEELP 526
Query: 513 PEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEE------GDVKVSEASRKRKAAT 566
+ +D+T+P + + + +E +G+ +++ G K S +++ K
Sbjct: 527 EQAEDKTIPRYKQIDKRAGDYVLE------WGEELEKQHQKMYTGQPKTSTLAKRGKPEH 580
Query: 567 ENAAKEC--------ANYDWADLADK-------GKLKEMTVQELKLYLMAHNLSTTGRKE 611
E AA+E + + + AD+ G L ++TV LK YL +S G+K
Sbjct: 581 EPAAEEKPVKKVKTESASNGRNAADEVQSHYNSGSLSKLTVAVLKEYLTKKKMSVMGKKA 640
Query: 612 TLISRI 617
LI R+
Sbjct: 641 DLIERV 646
>gi|332861894|ref|XP_003317804.1| PREDICTED: X-ray repair cross-complementing protein 6-like [Pan
troglodytes]
Length = 672
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 176/605 (29%), Positives = 279/605 (46%), Gaps = 80/605 (13%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +++LVDAS F + P+ED+ T F +++ CI
Sbjct: 135 RDSLIFLVDASKATFES--PSEDEL--TPFDMSIQCI----------------------- 167
Query: 88 RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSREN 145
+ +LD P A+ I E D F+ + G + ++ +
Sbjct: 168 -------------------QSELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGSDY 204
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL LWV L K K+I LFTNED+P G+ +AK RT +A D +D
Sbjct: 205 SLSEVLWVRANLFSDVQFKMNHKKITLFTNEDNPHGN--ESAKASQART---KAGDLRDT 259
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++ + KR
Sbjct: 260 GIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLQKVHAKETRKR 317
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQE 323
+ R+ + + I + Y L++ + L N P+KT+ R+F + L+
Sbjct: 318 ALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYREINEPVKTKTRTFNTSTDDLLLPS 377
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
K Q Y I +E E+K L L GFKPL LK H LRPS FV+P +
Sbjct: 378 DTKWSQIYGSRQIILEKEETEELKWFDDPGLMLMGFKPLVLLKKRHYLRPSLFVYPEESL 437
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHM 440
V+GS+ +F AL L A+ Y N P VALV Q+E++ QV PPG +
Sbjct: 438 VIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVTQEEVLDDQKIQVTPPGFQL 497
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
++LP++DD R + T A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 498 VFLPFADDKRKMPFTEKVT-----ATPEQVDKMKAIIEKLRFT-YRSDSFENPVLQQHFR 551
Query: 501 VLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV----S 556
L+ALAL+ + + D T+P E + R + V+EFK VY +Y+ EG V +
Sbjct: 552 NLEALALDLMEPEQAVDLTLPKVEAINR-RLGSLVDEFKEFVYPPDYNPEGKVTKRKHDN 610
Query: 557 EASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISR 616
E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 611 EGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEA 665
Query: 617 ILTHM 621
+ H
Sbjct: 666 LTKHF 670
>gi|397466943|ref|XP_003805196.1| PREDICTED: X-ray repair cross-complementing protein 6-like [Pan
paniscus]
Length = 749
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 176/605 (29%), Positives = 279/605 (46%), Gaps = 80/605 (13%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +++LVDAS F + P+ED+ T F +++ CI
Sbjct: 212 RDSLIFLVDASKATFES--PSEDEL--TPFDMSIQCI----------------------- 244
Query: 88 RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSREN 145
+ +LD P A+ I E D F+ + G + ++ +
Sbjct: 245 -------------------QSELDNPGAKRILELDQ----FKGQQGQKRFQDLMGHGSDY 281
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
SL LWV L K K+I LFTNED+P G+ +AK RT +A D +D
Sbjct: 282 SLSEVLWVRANLFSDVQFKMNHKKITLFTNEDNPHGN--ESAKASQART---KAGDLRDT 336
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
GI ++L+ L P F +S FY D+I + E +DL + + KLED+ ++ + KR
Sbjct: 337 GIFLDLMHLKKPGG-FDISLFYRDIISIAEDEDLRVHFEESS-KLEDLLQKVHAKETRKR 394
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQE 323
+ R+ + + I + Y L++ + L N P+KT+ R+F + L+
Sbjct: 395 ALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYWEINEPVKTKTRTFNTSTDDLLLPS 454
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
K Q Y I +E E+K L L GFKPL LK H LRPS FV+P +
Sbjct: 455 DTKWSQIYGSRQIILEKEETEELKWFDDPGLMLMGFKPLVLLKKRHYLRPSLFVYPEESL 514
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHM 440
V+GS+ +F AL L A+ Y N P VALV Q+E++ QV PPG +
Sbjct: 515 VIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVTQEEVLDDQKIQVTPPGFQL 574
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
++LP++DD R + T A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 575 VFLPFADDKRKMPFTEKVT-----ATPEQVDKMKAIIEKLRF-TYRSDSFENPVLQQHFR 628
Query: 501 VLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV----S 556
L+ALAL+ + + D T+P E + R + V+EFK VY +Y+ EG V +
Sbjct: 629 NLEALALDLMEPEQAVDLTLPKVEAINR-RLGSLVDEFKEFVYPPDYNPEGKVTKRKHDN 687
Query: 557 EASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISR 616
E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 688 EGSGSKRPKVEYSEEELKTH-----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEA 742
Query: 617 ILTHM 621
+ H
Sbjct: 743 LTKHF 747
>gi|315041481|ref|XP_003170117.1| Ku70 protein [Arthroderma gypseum CBS 118893]
gi|311345151|gb|EFR04354.1| Ku70 protein [Arthroderma gypseum CBS 118893]
Length = 646
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 172/645 (26%), Positives = 300/645 (46%), Gaps = 69/645 (10%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQIINRLYDE 79
++++K+ V++ ++ S M T P E ++ ++ +S ++ +II+ D
Sbjct: 24 YKSSKDAVLFAIEVSESML--TPPPESKSKRADKDAPITAALKSAYHLMQQRIISSPQDM 81
Query: 80 VAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI--EESFEKEIG 133
+ + + T+ K + + + + LD P A +KE + +E EI
Sbjct: 82 MGVLLYGTKSSKFYDEDEEGRGTLPYPHCYLYTDLDIPAASDVKELRALAHDEDSASEI- 140
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
+V ++ N L+ A + ++ + +R+ + T+ D+P + K +
Sbjct: 141 ----LVPSEDPVTMANVLFCANQIFTSKAANFSSRRLFIITDNDNPHKNEKA-----LRS 191
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQKLED 251
RAKD DLG+ IEL P+S P +EF S FY D+I D A A K
Sbjct: 192 AATVRAKDLYDLGVIIELFPISRPGDEFDRSKFYDDIIYKASPTDPEAPVFSQAATKSST 251
Query: 252 -------MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPGAITWLD 299
+ + L + SK + +R F I I + Y + + P ++
Sbjct: 252 SGGDGITLLNSLISSINSKSVPRRALFSNAPLEIGPDFKISVTGYLIFKRQEPARSCYIW 311
Query: 300 SVTNHP-LKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTGHLRL 356
P + + AD A E + + YK GE I F+ +E +E++ +R+
Sbjct: 312 LAGEQPQIAKGITTQLADDSAREVEKWEIRKAYKFGGEQISFTQEEQAELRNFGEPIIRI 371
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GFKPLS L + +++ TF++PS++ VGST F ALH+++L+ N+ A+ ++ N
Sbjct: 372 IGFKPLSSLPIWASMKHPTFIYPSEEGYVGSTRTFSALHQTLLKQNKMALVWFVPRRNAA 431
Query: 415 PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P + A++A +E + Q+ PPGM ++ LP++DDIR EL+ + A D V K
Sbjct: 432 PVMAAMIAGEEKLDDNDIQIIPPGMWILPLPFADDIRQNPELNHIS-----APDSLVDKM 486
Query: 474 AALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG 530
+++++ L F ++ NPSLQ HY +LQALAL+ED + +D+T+P + + R G
Sbjct: 487 RTIIQQLQLPKGQFDPHRYPNPSLQWHYRILQALALDEDVPEQAEDKTIPKYKAIDKRAG 546
Query: 531 --VVKAVEEFKLSVYGDNYDE-----------EGDVKVSEASRKRKAATENAAKECANYD 577
V++ EE + + G V E ++A TE A Y
Sbjct: 547 ELVIEWGEELESQYRALEKSQPVTSTLVKRPAPGAKGVKEEPASKRAKTEEHEDIKAYY- 605
Query: 578 WADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
+KG L ++TV LK +L+AH+L +G+K L+ R+ H G
Sbjct: 606 -----EKGTLNKLTVAVLKDFLIAHSLPASGKKADLVERVEEHFG 645
>gi|115433678|ref|XP_001216976.1| hypothetical protein ATEG_08355 [Aspergillus terreus NIH2624]
gi|114189828|gb|EAU31528.1| hypothetical protein ATEG_08355 [Aspergillus terreus NIH2624]
Length = 674
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 167/661 (25%), Positives = 298/661 (45%), Gaps = 84/661 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ ++ S M S P+ED + E+ A+ C ++ +II+ +D +
Sbjct: 24 YKTVKDAVLFAIEVSDSMLSPR-PSEDPKKSSGESPTTAALKCAYHLMQQRIISNPHDMM 82
Query: 81 AICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ + T+ K + DL+ + + LD P+AR +K+ + E E
Sbjct: 83 GVLLYGTQASKFYDEDENSRGDLSYPHCYLFTD---LDIPSAREVKDLRALAED---EGK 136
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
++ +V + S+ N L+ A + + +R+ + T+ D+P G K +
Sbjct: 137 TRDVLVPSTERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGDNKS-----LRS 191
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDLALF 241
RAKD DLG+ IEL P+S PD +F S FY D+I L+ D
Sbjct: 192 AATVRAKDLYDLGVIIELFPISRPDHDFDTSQFYDDIIYKTSPTDPEAPSYLKLDSKDTT 251
Query: 242 MPSAG-QKLEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--AITW 297
+ G L + + R +R V I + I ++ Y L + P W
Sbjct: 252 ATADGISLLNTLLSSINSRSVPRRAYVSNIPLELGPDFKISVSGYLLFKRQEPARNCFVW 311
Query: 298 LDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
L K + I DT +++ K+ + G+ + FS +EL E++ +R+
Sbjct: 312 LGGEKPQIAKGVTTQIADDTARTIEKWEVKKAYKFGGDQVSFSPEELKELRNFGDPVIRI 371
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GFKPLS L + N++ F++PS+++ +GST +F ALH+++LR + A+ ++ N
Sbjct: 372 IGFKPLSALPFWANVKHPFFIYPSEEDFIGSTRVFSALHQTLLRDKKLALVWFIPRKNGA 431
Query: 415 PRLVALVA-QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P L A++A Q+++ G Q PPGM +I LP++DD+R + + P D+++
Sbjct: 432 PVLGAMIAGQEKLDENGVQKFPPGMWIIPLPFADDVR--QNPETSLSVAPEPLIDQMR-- 487
Query: 474 AALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR--- 528
+++++ L + ++ NPSLQ HY +LQALAL+ED + +D+TVP + +
Sbjct: 488 -FIIQQLQLPKGVYEPSKYPNPSLQWHYRILQALALDEDLPEQPEDKTVPKYRQIHKVRL 546
Query: 529 ------------PGVVKAVEEFKLSVYGDNYDEEGDVK--------VSEASRKRKAATEN 568
K E+ L G+ + ++ R A TE+
Sbjct: 547 HPIRSLWLDSTVTNSSKRAGEYVLDWAGELEKHYAKIAAPGPNSTLAKRTAKDRAAETED 606
Query: 569 AAKECANYDWADLA------------DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISR 616
A + + A+ KG + ++TV LK +L +H S G+K L+ R
Sbjct: 607 GAAKPSKRIKAEATPSGIDDEVHHHYQKGTVAKLTVALLKEFLTSHGRSAAGKKADLVER 666
Query: 617 I 617
+
Sbjct: 667 V 667
>gi|66808405|ref|XP_637925.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
gi|74853572|sp|Q54MA9.1|KU70_DICDI RecName: Full=ATP-dependent DNA helicase ku70
gi|60466353|gb|EAL64413.1| ATP-dependent DNA helicase [Dictyostelium discoideum AX4]
Length = 909
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 215/440 (48%), Gaps = 51/440 (11%)
Query: 21 YQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
YQ + ++ +++L+DAS MF P E+ +E FH AV C+ Q++ +II D +
Sbjct: 63 YQNPYSYRDCIIFLIDASKAMFE---PNEN--NEIPFHNAVKCLIQTITDKIITSDSDLI 117
Query: 81 AICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS 140
+CF+NT KKKN+ D ++V LD P + I +EE E + G+ +
Sbjct: 118 GVCFYNTNKKKNINDFENIYVL-----SDLDIPDPKIILT---LEEMLENSNFTTNGLGN 169
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTAD----------KRILLFTNEDDPFGSIKGAAKND 190
E +ALW + + KRI LFTNED+P A ND
Sbjct: 170 CQGEMPFCDALWTCSTMFSNIKQSGSSSGENSNNNNFKRIFLFTNEDNP------NAYND 223
Query: 191 MTR-TTMQRAKDAQDLGISIELLPLSPP-DEEFKVSHFYADMIGLEGDDLALFMPS---A 245
R +++QR+KD DL I IEL ++ +++F S FY ++ + D+ P+ A
Sbjct: 224 SIRNSSIQRSKDLSDLNIQIELFSMNKSVNDKFDFSLFYQHIL-IFADEENYLDPTQFDA 282
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIA-------------NGLSIELNTYALIRPTVP 292
K D++ +L+++ F KR + ++ I + + I Y L
Sbjct: 283 SSKFSDLRFKLKRKEFKKRSLGKLPLYIGNLNNNNNNSNSLDSQVIISTQLYNLFSHAHK 342
Query: 293 GAITWLDSVTNHPLKTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVST 351
+ T LD TN P+K +CA+T A L+ K Y GE + F+ E+ IK +
Sbjct: 343 SSPTLLDPKTNLPVKQLIKNVCANTQATLLPSQIKLCYHYGGEPVIFTKDEMQTIKSIDR 402
Query: 352 GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYG- 410
L GFKPL +K YH+++ S F+FP D+ + GS F AL ML+ + A+ +
Sbjct: 403 IGFTLLGFKPLENIKPYHSIKHSQFIFPDDQSIKGSVLAFNALVEQMLKSGKAAICRFTP 462
Query: 411 -NPSNPRLVALVAQDEIVRA 429
+ S+PR+VAL+ Q+EI+++
Sbjct: 463 RSSSSPRMVALIPQEEILQS 482
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 432 QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFA 491
Q+ P GMH+IYLP++DDIR + +D + + + KA ++K + +K F +F
Sbjct: 547 QIRPRGMHVIYLPFADDIRYPNNIGVKSDGL-EIKQENIDKAKNIIKMMKIK-FDEKKFV 604
Query: 492 NPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEG 551
NP LQ+HYA LQA+ALE D + E D PD + + + V+ ++F ++ Y
Sbjct: 605 NPGLQKHYASLQAIALERDKVEETVDNIQPDRKLIEK--VIDTTQDFSDGIFPVGYASTV 662
Query: 552 DVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNL--STTGR 609
S S + K+ + DW D+ G++ ++TV +LK +L N+ S+ +
Sbjct: 663 SSATSSTSSSSAKRLRD-GKDLSTMDWPDMVKSGEIIKLTVDDLKSFLSNQNIKPSSKAK 721
Query: 610 KETLISRI 617
K LI I
Sbjct: 722 KADLIDLI 729
>gi|149606488|ref|XP_001507917.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Ornithorhynchus anatinus]
Length = 413
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 217/426 (50%), Gaps = 23/426 (5%)
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRI 265
I ++L+ L P F +S FY D+I E +DL + +G KLED+ ++R + KR
Sbjct: 1 IFLDLMHLKKPGG-FDISLFYRDIINTAEDEDLGVHFEESG-KLEDLMKKVRAKETRKRS 58
Query: 266 VKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALMQEP 324
+ R++ + +++ ++ + L++ L TN P+KT+ R+F G L+
Sbjct: 59 LARLNLRLGKDVALTVSIFNLVQKAFKPPPIRLYRETNEPVKTKTRTFNLDTGGLLLPSD 118
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
KR Q Y I +E E+KR L L GFKPL+ LK + LRPS FV+P + V
Sbjct: 119 TKRSQTYGNRQIVMEKEETEELKRFDDPGLILIGFKPLTTLKRHQYLRPSQFVYPEESLV 178
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMI 441
GST +F AL L A+ Y N PR VALV QDE + A QV PPG ++
Sbjct: 179 NGSTTLFNALLTKCLEKEVLALCRYTPRRNTPPRFVALVPQDEELDAQKIQVSPPGFQLV 238
Query: 442 YLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAV 501
+LPY+DD R V T+ VP A+ ++V K A+++++ K + F NP LQ+H+
Sbjct: 239 FLPYADDKRKV----PFTEKVP-ANPEQVDKMKAIVQKLRFK-YRSDSFENPVLQQHFRN 292
Query: 502 LQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASR 560
L+ALAL+ + + +D T+P E M R G + V+EFK VY NY+ EG R
Sbjct: 293 LEALALDLMEPEQAEDLTMPKVEAMNNRLGSL--VDEFKELVYPPNYNPEGKA----VKR 346
Query: 561 KRKAATENAAK---ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
K+ K E + D D KG L ++TV LK L G+K+ L+ +
Sbjct: 347 KQGGDGPEDKKIKFELSEQDLRDHVKKGTLGKLTVPLLKEACRTFGLKGGGKKQELLDVL 406
Query: 618 LTHMGK 623
+ H K
Sbjct: 407 MEHFEK 412
>gi|154289722|ref|XP_001545469.1| hypothetical protein BC1G_16015 [Botryotinia fuckeliana B05.10]
Length = 649
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 293/633 (46%), Gaps = 52/633 (8%)
Query: 23 EHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI--AVSCIAQSLKTQIINRLYDEV 80
++ K+ V++++D S M + P++ + +T A+ C ++ +II+ D +
Sbjct: 24 DYRTQKDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMM 83
Query: 81 AICFFNTR--KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGI 138
I + T K K+ L+ + LD P+A+ ++ I E E+ + +
Sbjct: 84 GIMLYGTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEE---ANKIL 140
Query: 139 VSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
+ + N L+ A + + +R+ + T++DDP K R
Sbjct: 141 IPTEETLDMNNLLFCANQIFTTRAPNFGSRRLFIITDKDDPHSGDKS-----QKSLAAVR 195
Query: 199 AKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE--GDDLALFMPSAGQKLEDMKDQL 256
AKD D+G+ IEL P+S D EF + FY D+I + +D + P++ + D L
Sbjct: 196 AKDLYDIGVVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLL 255
Query: 257 RKRMF---SKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAIT--WLDSVTNHPL 306
+ SK++ KR + F I L+I +N Y ++ P T W+
Sbjct: 256 NNLILDVNSKQVAKRSLFSNLPFEIGPNLTISVNGYNVLHKQTPARRTFVWMGGEVPEKP 315
Query: 307 KTERSFICADTGALMQ--EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY 364
E + + DT ++Q E K +Q + G + F+ E ++K LR+ GFKP S
Sbjct: 316 TLETTQMAEDTARVIQKVEIKKAYQ-FGGSQVLFTPDEQKQLKDFGQPGLRIIGFKPQSM 374
Query: 365 LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVA 422
L + ++ STF++PS+ + VGST +F AL +L+ + + +Y N P +VA++
Sbjct: 375 LPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGLGWYIARKNAIPAIVAILP 434
Query: 423 QDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
E + Q+ P G+ + +P++DD+R V A A D+ + +++++
Sbjct: 435 SAEKLDPATNQQIFPAGLWLYPMPFADDLRSVA-----APAPIVAPDELIDNMRVVVQQL 489
Query: 481 DLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP--------G 530
L + + NPSLQ HY +LQA+ALEED +D+TVP + + G
Sbjct: 490 QLPKAQYDPRNYPNPSLQWHYRILQAMALEEDVPENPEDKTVPKYRQIEKRCGAYINEWG 549
Query: 531 VVKAVEEFKLSV-YGDNYDEEGD--VKVSEASRKRKAATENAAKECANYD---WADLADK 584
A E K G+ E D + E RK+K +++AK+ + D ++L
Sbjct: 550 RTLAFEYEKWCREKGNALKRERDEGIDEPEVPRKKKILVKSSAKKLSEMDREELSNLVSN 609
Query: 585 GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G L++ V +LK +LMA L++ G+K L+ R+
Sbjct: 610 GGLEKFKVADLKDWLMAKGLNSAGKKADLVERL 642
>gi|442570192|sp|Q1DU75.2|KU70_COCIM RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|392865133|gb|EAS30893.2| ATP-dependent DNA helicase II subunit 1 [Coccidioides immitis RS]
Length = 647
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 163/636 (25%), Positives = 295/636 (46%), Gaps = 61/636 (9%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCP---AEDQTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
+++ K+ V++ ++ S M T P ++ E+ A+ C ++ +II+ D +
Sbjct: 24 YKSVKDAVLFAIEVSESML-TAAPNPTSKKARPESPATAALKCAYHLMQQRIISNPKDMI 82
Query: 81 AICFFNTRKKKNLQD---------LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ + T K D ++F LD P A +KE + E E
Sbjct: 83 GVLLYGTESSKFYDDDEDGRGSLPYPHCYLFT-----DLDVPAASDVKELHAL---VEDE 134
Query: 132 IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
+ +V S+ N L+ A + + + +R+ + T+ D+P K +
Sbjct: 135 DRAAEILVPSKEPVSMANVLFCANQIFTTKAPNFSSRRLFIVTDNDNPHSKDKV-----L 189
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI------GLEGDDLALF-MPS 244
RAKD DLG+ IEL P+S PD +F S FY DMI E + + +
Sbjct: 190 KSAATVRAKDLYDLGVVIELFPISTPDHDFDTSKFYDDMIYRASPTDPEAPNYSCTSTKT 249
Query: 245 AGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITW 297
+G + + L + SK + +R F + I ++ + + + P W
Sbjct: 250 SGADGISILNSLLSSINSKSVPRRALFSNLPLELGPEFRISVSGFLIFKRQAPARSCYVW 309
Query: 298 LDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
L +K + + D+ +++ ++ + GE++ F+ +E S ++ +R+
Sbjct: 310 LGGEQPQIVKGVTTLVADDSAREVEKWEIRKAYKFGGEHVAFTQEEQSALRNFGDPVIRI 369
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GFKP+S L + + + STF++PS+ VGST +F AL +++L+ +FA+ ++ N
Sbjct: 370 IGFKPMSSLPIWASTKHSTFIYPSEAGFVGSTRVFSALQQTLLKQKKFALVWFVARKNAA 429
Query: 415 PRLVALVAQDEIVRAG-GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P + AL+ +E + QV PPGM + LP++DDIR E H+ P D++++
Sbjct: 430 PVMAALIPGEEKLDDNDAQVIPPGMWIQPLPFADDIRQNPETHNIV--APEPLIDKMREI 487
Query: 474 AALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVV 532
+++ + + ++ NPSLQ HY +LQALAL+ED + +D+T+P + + R G
Sbjct: 488 IQVLQ-LPKGRYDPQRYPNPSLQWHYRILQALALDEDLPDQAEDKTIPKYKQIDKRAG-- 544
Query: 533 KAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENA-----------AKECANYDWADL 581
+ V E+ + N E ++ KR A + A A+ + +
Sbjct: 545 EHVLEWGEELETQNRLLENSKPITSTLAKRPAPSRKAEGDERATKRVRAESTGDAEVKMH 604
Query: 582 ADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+KG L ++TV LK +L++HNLS TG+K LI R+
Sbjct: 605 YEKGSLNKLTVTILKDFLLSHNLSGTGKKADLIDRV 640
>gi|171690386|ref|XP_001910118.1| hypothetical protein [Podospora anserina S mat+]
gi|170945141|emb|CAP71252.1| unnamed protein product [Podospora anserina S mat+]
Length = 650
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 169/638 (26%), Positives = 303/638 (47%), Gaps = 64/638 (10%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI--AVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D S M ++D+ + + A+ C Q ++ +II + D +
Sbjct: 25 YKTQKDAVLFAIDVSASMLQPPPSSDDKKSDKDSAVVAALKCAHQFMQQRIIAQPKDMMG 84
Query: 82 ICFFNTRKKKNLQDLNA--------VFVFNVAEREQLDRPTARFIKEF-DHIEESFEKEI 132
I F T K K D + ++F +LD P A +K+ D +EE + +
Sbjct: 85 ILLFGTEKSKFRDDTGSRSGSGYPHCYLFT-----ELDVPGAEDVKKLRDLVEEGEDAD- 138
Query: 133 GSQYGIVSGSRENSLY-NALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
++ S+E L N L+ A + ++ +R+ + T+ ++P G+ K A
Sbjct: 139 ----EVLVPSKEPVLMSNVLFCANQIFTTNAANFGSRRLFIITDNENPHGNDKQAKS--- 191
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL----EGDDLALFMPSAGQ 247
+ RAKD DLG++IEL P+S + F +S FY D++ EGD+ S
Sbjct: 192 --SAAVRAKDLYDLGVTIELFPVSRAKKPFDLSKFYDDIVYRSSVEEGDNPEGVKTSRSG 249
Query: 248 KLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPG--AITWLDS 300
+ + L + SK+ KR + F +A GL+I + Y + P WL
Sbjct: 250 DGLTLLNSLISNINSKQTPKRSYFSRMPFELAPGLTITVKGYMPLHQQKPARTCYVWLGG 309
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
++E + + ++ + + K+ + GE I F+ +E +K + T LR+ GFK
Sbjct: 310 EQAQLAQSETTKVDSEARTVEKSEIKKAYKFGGEYIYFTPEEAKSLKELDTKVLRIIGFK 369
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLV 418
PL+ + + +++ STF+FPS+ VGST +F AL + +L + +A+Y +NP +V
Sbjct: 370 PLANIPMWASVKKSTFIFPSEDGYVGSTRVFSALWQKLLTSKKVGIAWYVARKNANPVMV 429
Query: 419 ALVA----QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAA 474
A++ DE + P G+ + LP++DDIR V E+ + T + +D+ K
Sbjct: 430 AVIPSGSLNDEDEDSTAPYLPAGLWLYPLPFADDIRSV-EIKTST----KPADELTDKMR 484
Query: 475 ALMKRIDL--KDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGV 531
+++ + L ++ ++ NP+LQ HY +LQA+ALEED + D TVP + R G
Sbjct: 485 EIIQNLQLPKATYNPLKYPNPALQWHYKILQAMALEEDVPDALDDLTVPKYRQIDKRVGA 544
Query: 532 V----------KAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAK--ECANYDWA 579
KA E +L +E+ + +++ K A +A+ + +N +
Sbjct: 545 YMAEWKQELADKAKEFMQLRATKRELEEDDAEERPRLAKRPKTAAGSASSGGQMSNAELK 604
Query: 580 DLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ LK++TV LK L + +STTG+K L+ R+
Sbjct: 605 AAWENDTLKKLTVAVLKDILTSKGISTTGKKVDLLERL 642
>gi|346325135|gb|EGX94732.1| DSB repair complex subunit Ku70, putative [Cordyceps militaris
CM01]
Length = 643
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 177/655 (27%), Positives = 310/655 (47%), Gaps = 62/655 (9%)
Query: 4 DPDDVFRDDDEESDNEFYQEHEAT-KEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIA 60
D +D RD++++ D E + T K+ V+ ++ S M P++ + ++ A
Sbjct: 3 DSNDWRRDEEDDGDQEIDETSFKTQKDAVLLAIEVSESMLRAPPPSDSKKADRDSPVQAA 62
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA--------VFVFNVAEREQLDR 112
+ C ++ +II+ D + I F T K + D N ++F LD
Sbjct: 63 LKCAYHFVEQRIISNPKDMIGILLFGTEKTRFQLDENGRSGLGYPHCYLFT-----DLDV 117
Query: 113 PTARFIKEFDHIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRIL 171
P+A +K + E ++E G I+ +RE S+ N L+ A + ++ +R+
Sbjct: 118 PSADDVKALKSLVE--DEETGDD--ILKPTRETVSMSNVLFCANQIFTTRAANFGSRRLF 173
Query: 172 LFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI 231
L T+ D+P S RAKD DLG+SI+L P+S D +F ++ FY D++
Sbjct: 174 LVTDNDNPHSS-----DTAARSAAAVRAKDLYDLGVSIDLFPISHHDTKFDLAKFYDDIL 228
Query: 232 G----LEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELN 282
E + + + +G L ++ L + SK+ KR F IA GL I +
Sbjct: 229 YRDALAEANPQEVAISRSGDGL-NLLTSLISNVSSKQTPKRALFSNLPLEIAPGLRISVK 287
Query: 283 TYALI--RPTVPGAITWLDSVTNHPLKTERSFICAD-TGALMQEPAKRFQPYKGENIKFS 339
Y +I + WLD E + I D T + + K+ + GE + FS
Sbjct: 288 GYNIIHRQAAARTCYIWLDGEKPQLAVGETTRIAEDSTRTVEKGEIKKAYKFGGEYVYFS 347
Query: 340 VQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSML 399
+E +K + +R+ GFK + + +++ STF++PS+++ VGST +F AL +L
Sbjct: 348 PEEQKSVKDFGSPVIRIIGFKSRRSIPLWSSVKKSTFIYPSEEDYVGSTRVFTALWEKLL 407
Query: 400 RLNRFAVAF--YGNPSNPRLVALVA----QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVE 453
+ ++ A+A+ + +NP L A++ DE +G P G+ + LP++DD+R ++
Sbjct: 408 KDDKVALAWCIVRSNANPVLTAIMPSKSQSDEY--SGTPFLPAGLWLYPLPFADDLRDIK 465
Query: 454 ELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDD 511
+ +ASDD + +++++ L ++ ++ NPSLQ HY +LQALALEE+
Sbjct: 466 P----PGKLAQASDDLKTQMRTIIQQLQLPKAMYNPTKYPNPSLQWHYKILQALALEEEV 521
Query: 512 MPEIKDETVPDEEGMAR--PGVVKAVE-----EFKLSVYGDNYDEEGDVKVSE--ASRKR 562
+D T+P + +++ G ++ E K + E D ++ E A R R
Sbjct: 522 PETAEDATLPKFKAISKRAGGYLEEWSETLSTEVKSTTEARAVKREIDDELPERPAKRGR 581
Query: 563 KAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
A+ + AA + + D G + +MTV +LK A LST+GRK +I RI
Sbjct: 582 GASAQPAASGLTSAQLKAVVDDGSISKMTVAQLKDIAGAKGLSTSGRKADIIERI 636
>gi|296192589|ref|XP_002744136.1| PREDICTED: X-ray repair cross-complementing protein 6 [Callithrix
jacchus]
Length = 572
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 258/524 (49%), Gaps = 34/524 (6%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLYNALWVAQGLLRKGSSKTA 166
+LD P A+ I E D F+ + G + ++ + SL LWV+ K +
Sbjct: 70 ELDNPGAKRILELDQ----FKGQQGQKRFQELMGHGSDYSLSEVLWVSANFFSDVQFKMS 125
Query: 167 DKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHF 226
+RI+LFT+ED+P G+ +AK RT +A D QD GI ++L+ L P F +S F
Sbjct: 126 HRRIMLFTDEDNPHGN--DSAKASQART---KAGDLQDTGIFLDLMHLKKPGG-FDISLF 179
Query: 227 YADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYA 285
Y D+I + E +DL + + KLED+ ++ + KR + R+ + + I ++ Y
Sbjct: 180 YRDIISIAEDEDLRVHFEESS-KLEDLLWKVHAKETRKRALCRLKLKLNKDVVIFVHIYN 238
Query: 286 LIRPTVPGAITWLDSVTNHPLKTER-SFICADTGALMQEPAKRFQPYKGENIKFSVQELS 344
L++ + L TN P+KT+ +F + G L+ KR Q Y I +E
Sbjct: 239 LVQKALKPPPIKLYRETNEPVKTKTWTFNTSTGGLLLPSNTKRSQIYGSCQIILEKEETE 298
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
E+KR L GFKP+ LK +H LRPS FV+P V+GS+ +F AL L
Sbjct: 299 ELKRFDDPGLMFMGFKPMVMLKKHHYLRPSLFVYPEGSLVIGSSILFSALLIKCLEKEVA 358
Query: 405 AVAFYGNPSN--PRLVALVAQD-EIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
A+ Y N P VA V QD E+ Q PPG +++LP++DD R + T+
Sbjct: 359 ALCRYTPRRNIPPYFVAFVPQDEELDDRKIQATPPGFQLVFLPFADDKRKM----PFTEK 414
Query: 462 VPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
+ A +++ K A+++++ + F NP LQ+H+ L+ALAL+ D + D T+P
Sbjct: 415 I-MAPPEQMDKMKAIVEKLCFT-YRSDSFENPMLQQHFRNLEALALDLMDPEQAVDLTLP 472
Query: 522 DEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANYD 577
E M + + V+EFK VY +Y+ EG+V +E S ++ E + +E +
Sbjct: 473 RVEAMNK-RLGSLVDEFKELVYPPDYNHEGNVTKRKHDNEGSGSKRPKVEFSEEELRTH- 530
Query: 578 WADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
KG L + TV LK A+ L + +K+ L+ + H
Sbjct: 531 ----ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHF 570
>gi|451993350|gb|EMD85824.1| hypothetical protein COCHEDRAFT_1198766 [Cochliobolus
heterostrophus C5]
Length = 782
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 179/659 (27%), Positives = 311/659 (47%), Gaps = 88/659 (13%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ + SP M +ED+ E + A+ C Q ++ +II+ D +
Sbjct: 26 YKTIKDAVLFAIHVSPSMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMG 85
Query: 82 ICFFNTRKKKNLQDLNAVF--VFNVAEREQLDRPTARFIKEF-DHIEESFEKEIGSQYGI 138
I F T ++ +L+D + F + +A+ LD P+A+ +K D +E+ E E I
Sbjct: 86 ILLFGT-EETDLKDGDNTFQHCYLLAD---LDVPSAQDVKRLRDMVEDEEEAE-----KI 136
Query: 139 VSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
+ +++ S+ L+ A + + + +R+ L T+ D P +K A D T
Sbjct: 137 LKPAKDGASIATVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VKAKADKDAAVT--- 190
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AGQK 248
RA+D DLG +I+L P+S PD F S FY D++ D + +PS +G+
Sbjct: 191 RARDLYDLGCTIDLFPISQPDHNFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEG 250
Query: 249 LEDMKDQLRKRMFSKRIVKRISFII----ANGLSIELNTYALIRPT--VPGAITWLDSVT 302
+ +K QL + SK +R F + L I + Y LI+ V W+
Sbjct: 251 ISLLK-QLISSINSKATPRRALFSLPLELGPDLRIGVKGYILIKRQEHVKSCYVWVGGEK 309
Query: 303 NHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLHGF 359
+ + + + DT ++ E A+ + YK G+ I F+ +E+++I++ +R+ GF
Sbjct: 310 PQIVTSSTAHMADDTAQIV-EKAELRKAYKFGGDAITFTPEEITKIRQCFGQPVIRIIGF 368
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRL 417
KPLS + + N STF++PS+ + +GST +F AL R +L+ + + ++ N P L
Sbjct: 369 KPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNAAPTL 428
Query: 418 VALVAQDEIVR-AGGQVEPPGMHMIYLPYSDDIR----PVEELHSDTDAVPRASDDEVKK 472
AL+ +E G QV PPG+ +I LP++DDIR P EE TD + K
Sbjct: 429 AALIPGEEKTNEEGEQVMPPGLWLIPLPFADDIRQFPTPPEEPLKTTDVL-------TDK 481
Query: 473 AAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEED--DMPEIKDETVPDEEGM-A 527
+++++ L + ++ NP LQ Y +LQALALEE+ D PE D+T+P + +
Sbjct: 482 MRLIIEQLQLPKGIYDPSRYPNPDLQWFYRILQALALEEELPDHPE--DKTIPRFKQIDK 539
Query: 528 RPG--VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKE------------- 572
R G + +EF+ VY + ++KR + +E
Sbjct: 540 RCGEYIEDYGKEFQ-EVYAQQQKSALAHRTKPTAKKRTGGADTDVEEKKPVAKRVKKEFK 598
Query: 573 ----------CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ AD+ + G++ + TV LK +L A ST G+K L+ R+ ++
Sbjct: 599 GADGGDEDGGMTDQQMADMNNSGQISKQTVAVLKQWLGARGQSTAGKKADLLERVQEYL 657
>gi|347832489|emb|CCD48186.1| BcKU70, protein involved in DNA reparation [Botryotinia fuckeliana]
Length = 649
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 164/633 (25%), Positives = 293/633 (46%), Gaps = 52/633 (8%)
Query: 23 EHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI--AVSCIAQSLKTQIINRLYDEV 80
++ K+ V++++D S M + P++ + +T A+ C ++ +II+ D +
Sbjct: 24 DYRTQKDAVLFVIDVSESMLTPPPPSDSKKADTDSPTLAALKCAHMIMQQRIISSPKDMM 83
Query: 81 AICFFNTR--KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGI 138
I + T K K+ L+ + LD P+A+ ++ I E E+ + +
Sbjct: 84 GIMLYGTEETKFKDQSGLDTSVYPHCYLLTDLDIPSAKDVRALKEIVEDEEE---ANKIL 140
Query: 139 VSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
+ + N L+ A + + +R+ + T++DDP K R
Sbjct: 141 IPTEETLDMNNLLFCANQIFTTRAPNFGSRRLFIITDKDDPHSGDKS-----QKSLAAVR 195
Query: 199 AKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE--GDDLALFMPSAGQKLEDMKDQL 256
AKD D+G+ IEL P+S D EF + FY D+I + +D + P++ + D L
Sbjct: 196 AKDLYDIGVVIELFPISTRDHEFDRTKFYDDIIYRDPLAEDPPIVGPNSLKSNGDGLSLL 255
Query: 257 RKRMF---SKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAIT--WLDSVTNHPL 306
+ SK++ KR + F I L+I +N Y ++ P T W+
Sbjct: 256 NNLILDVNSKQVAKRSLFSNLPFEIGPNLTISVNGYNVLHKQTPARRTFVWMGGEVPEKP 315
Query: 307 KTERSFICADTGALMQ--EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY 364
E + + DT ++Q E K +Q + G + F+ E ++K LR+ GFKP S
Sbjct: 316 TLETTQMAEDTARVIQKVEIKKAYQ-FGGSQVLFTPDEQKQLKDFGQPGLRIIGFKPQSM 374
Query: 365 LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVA 422
L + ++ STF++PS+ + VGST +F AL +L+ + + +Y N P +VA++
Sbjct: 375 LPFWASVHKSTFIYPSEADYVGSTRVFSALWEKLLKDKKMGLGWYIARKNAIPAIVAILP 434
Query: 423 QDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
E + Q+ P G+ + +P++DD+R V A A D+ + +++++
Sbjct: 435 SAEKLDPATNQQIFPAGLWLYPMPFADDLRSVA-----APAPIVAPDELIDNMRVVVQQL 489
Query: 481 DLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP--------G 530
L + + NPSLQ HY +LQA+ALEED +D+TVP + + G
Sbjct: 490 QLPKAQYDPRNYPNPSLQWHYRILQAMALEEDVPENPEDKTVPKYRQIEKRCGAYINEWG 549
Query: 531 VVKAVEEFKLSV-YGDNYDEEGD--VKVSEASRKRKAATENAAKECANYD---WADLADK 584
A E K G+ E D + E RK+K +++AK+ + D ++L
Sbjct: 550 RTLAFEYEKWCREKGNALKRERDEGIDEPEVPRKKKILVKSSAKKLSEMDREELSNLVSN 609
Query: 585 GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G L++ V +LK +L+A L++ G+K L+ R+
Sbjct: 610 GGLEKFKVADLKDWLLAKGLNSAGKKADLVERL 642
>gi|121713328|ref|XP_001274275.1| DSB repair complex subunit Ku70, putative [Aspergillus clavatus
NRRL 1]
gi|119402428|gb|EAW12849.1| DSB repair complex subunit Ku70, putative [Aspergillus clavatus
NRRL 1]
Length = 654
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 173/647 (26%), Positives = 297/647 (45%), Gaps = 76/647 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ ++ S M T P D + E+ A+ C ++ +II+ D +
Sbjct: 24 YKTVKDAVLFAIEISDSMI-TPRPLSDPKKKVVESPATAALKCAYHLMQQRIISNPRDMI 82
Query: 81 AICFFNTRKKKNL-QDLNA--------VFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ + T+ K +D N+ ++F LD P+AR +K+ + E E
Sbjct: 83 GVLLYGTQASKFYDEDENSRGDLSYPHCYLFT-----DLDVPSAREVKDLRALAED---E 134
Query: 132 IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
++ +V S+ N L+ A + + +R+ + T+ D+P G K+
Sbjct: 135 GAAREVLVPSKERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD----NKSQR 190
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDLA 239
+ T+ RAKD DLG+ IEL P+S P+ EF S FY D+I L+ D A
Sbjct: 191 SAATV-RAKDLYDLGVVIELFPISQPEHEFDSSKFYDDIIYKASPNDVEAPAYLQADSKA 249
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG- 293
G L + L + S+ + +R F I I + Y L + P
Sbjct: 250 STTSRDGISL---LNGLLSSINSRSVPRRAHFSNMPLEIGPNFKISVTGYLLFKRQEPAR 306
Query: 294 -AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVS 350
WL +K + I DT +++ R + YK E I F+ +E ++
Sbjct: 307 SCYVWLGGEKPEIVKGVTTQIADDTARTVEKSEIR-KAYKFGNEQISFTPEEQKALRNFG 365
Query: 351 TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYG 410
+R+ GFKPLS L + N++ F++PS+++ VGST +F ALH+ +L+ + + ++
Sbjct: 366 DPVIRIIGFKPLSALPFWANVKHPFFIYPSEEDYVGSTRVFSALHQKLLKDQKVGLVWFI 425
Query: 411 NPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD 467
N P L AL+A +E V Q PPGM +I LP++DD+R + + + P
Sbjct: 426 PRKNAAPVLGALIAGEEKVDENDVQKFPPGMWIIPLPFADDVR--QNPETSLNVAPEPLI 483
Query: 468 DEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEG 525
D+++ +++++ L + ++ NPSLQ HY +LQALAL+ED + +D+TVP
Sbjct: 484 DQMR---TIIQQLQLPKAMYEPQKYPNPSLQWHYRILQALALDEDLPEKPEDKTVPKYRQ 540
Query: 526 M-ARPG--VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATEN------------AA 570
+ R G V+ +E + + V ++ R A T++ +
Sbjct: 541 IDKRAGDYVLSWADELEKQYATTSAHAPQSTLVKRTAKDRAAETDDLPSRPAKKVKAESG 600
Query: 571 KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
E + D L +KG L ++TV LK +L AH S G+K L+ R+
Sbjct: 601 PEGVDEDVRRLFEKGSLSKLTVATLKEFLTAHGRSAAGKKADLLERV 647
>gi|317035392|ref|XP_001396808.2| ATP-dependent DNA helicase II subunit 1 [Aspergillus niger CBS
513.88]
Length = 653
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 169/653 (25%), Positives = 304/653 (46%), Gaps = 88/653 (13%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ +D S M T P+ D T E+ A+ C ++ +II+ D +
Sbjct: 24 YKPVKDAVLFAIDVSDSML-TPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMM 82
Query: 81 AICFFNTRKKKNLQ-------DLN--AVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ F T+ K + DL+ ++F LD P+A +K + +
Sbjct: 83 GVLLFGTQASKFFEEDEDSRGDLSYPNCYLFT-----DLDVPSAHEVKGL----RALVDD 133
Query: 132 IGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
G ++S ++E S+ N L+ A + + +R+ + T+ D+P G K
Sbjct: 134 EGDSREVLSPAKEQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK-----T 188
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDL 238
+ RAKD DLG++IEL P+S P+ EFK S FY D+I L+ D
Sbjct: 189 LRSAATVRAKDLYDLGVTIELFPISRPEHEFKNSKFYDDIIYKSLPSDPEAPAYLQSDSK 248
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG 293
A G L + L + S+ + +R F + I ++ Y L+R P
Sbjct: 249 AATATGDGISLLNT---LLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYILLRRQAPA 305
Query: 294 --AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVS 350
+ WL+ K S DTG +++ ++ + G+ + FS E ++
Sbjct: 306 RNSFIWLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFG 365
Query: 351 TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY- 409
+R+ GFKP++ L + N++ F++PS+++ VGS+ +F ALH+++LR + A+ ++
Sbjct: 366 EPVIRVIGFKPITALPFWANVKHPYFIYPSEEDYVGSSRVFSALHQTLLRSKKMALVWFI 425
Query: 410 -GNPSNPRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD 467
+ P L A++A +E + G Q PPGM ++ LP++DDIR + + + P +
Sbjct: 426 ARKGAGPVLAAMIAGEEKLDENGVQKYPPGMWILPLPFADDIR--QNPETTLNVAPESLI 483
Query: 468 DEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEG 525
D+++ +++++ L + ++ NPSLQ HY +LQALAL+ED + +D+T+P
Sbjct: 484 DQMR---VIVQQLQLPKGVYEPLKYPNPSLQWHYRILQALALDEDLPEKPEDKTIPKYR- 539
Query: 526 MARPGVVKAVEEFKLSVYGDNYDEE-----------GDVKVSEASRKRKAATEN---AAK 571
+ K ++ LS + D +++ V S+ R + TE+ + K
Sbjct: 540 ----QIDKRAGDYVLS-WADELEKQYAKTSAAAPRPTSTLVKRGSKDRASETEDSKPSKK 594
Query: 572 ECANYDWADLAD-------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
D L + KG L ++TV LK +L ++ S G+K LI R+
Sbjct: 595 IKVEEDSGSLEEEVRRHHKKGTLSKLTVAILKDFLTSNGRSNAGKKADLIERV 647
>gi|390362977|ref|XP_003730269.1| PREDICTED: X-ray repair cross-complementing protein 5-like, partial
[Strongylocentrotus purpuratus]
Length = 325
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 29/346 (8%)
Query: 284 YALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL-MQEPAKRFQPYKGENIKFSVQE 342
Y L+R L TN LK + C DTG L M K++Q Y G+NI F E
Sbjct: 1 YTLVRQQAKPYPVKLHRQTNEALKNKSKMYCEDTGELLMPSDIKKYQTYGGKNIIFEKDE 60
Query: 343 LSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLN 402
+ E+K+ L L GFKP S LK Y +++P+ F+FP + V GS +F AL + +
Sbjct: 61 VDEVKKFYDPGLTLMGFKPRSALKKYFHVKPAQFLFPDETSVSGSNTLFNALLQRCSARD 120
Query: 403 RFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDT 459
+ A+ Y N P+ VAL+ Q +E+ Q+ PPG H+I+LP+SDD+R +E
Sbjct: 121 KVAICRYIPRKNSPPKFVALLPQKEELDEHSVQITPPGFHLIFLPFSDDMRKLEH----- 175
Query: 460 DAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
PRA+ D++ KA ++K++ + FS F NP LQ HY L+ALAL+ D ++ D T
Sbjct: 176 PTHPRATPDQIDKAKNVVKKLQFQ-FSSENFENPVLQTHYRTLEALALDRDTTDDMVDHT 234
Query: 520 VPDEEGMAR---PGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANY 576
P++E + R PG + EF SV+ + YD
Sbjct: 235 EPNKEMIERRAGPG----IREFMESVFPEGYDPT------------AKPAARKKAAGGTI 278
Query: 577 DWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
D A+ A K +L ++TV LK + + LST GRK LI I H+G
Sbjct: 279 DVAEQARKEQLSKLTVAVLKEFCQTNGLSTAGRKNDLIGTINDHLG 324
>gi|358373931|dbj|GAA90526.1| DSB repair complex subunit Ku70 [Aspergillus kawachii IFO 4308]
Length = 653
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 169/652 (25%), Positives = 304/652 (46%), Gaps = 86/652 (13%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
+ + K+ V++ +D S M T P+ D T E+ A+ C ++ +II+ D +
Sbjct: 24 YRSVKDAVLFAIDVSDSML-TPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMM 82
Query: 81 AICFFNTRKKKNLQ-------DLN--AVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ F T+ K + DL+ ++F LD P+A+ +KE + +
Sbjct: 83 GVLLFGTQASKFFEEDEDSRGDLSYPNCYLFT-----DLDVPSAQEVKEL----RALVDD 133
Query: 132 IGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
G I++ ++E S+ N L+ A + + +R+ + T+ D+P G K
Sbjct: 134 DGDSRDILAPAKEQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK-----T 188
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG------------LEGDDL 238
+ RAKD DLG++IEL P+S P+ EFK S FY D+I L+ D
Sbjct: 189 LRSAATVRAKDLYDLGVTIELFPISRPEHEFKNSKFYDDIIYKSSPNDPEAPAYLQTDSK 248
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG 293
A G L + L + S+ + +R F + I ++ Y L+R P
Sbjct: 249 AATATGDGISL---LNTLLSSINSRTVPRRTHFSNMPLELGPDFKISVSGYILLRRQAPA 305
Query: 294 --AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVS 350
+ WL+ K + DTG +++ ++ + G+ + FS E ++
Sbjct: 306 RNSFIWLNGEKPVVAKGVTTHSADDTGRNVEKWEIRKAYKFGGDQVTFSPDEQKALRDFG 365
Query: 351 TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY- 409
+R+ GFKP++ L + N++ F++PS+++ VGS+ +F ALH+ +LR + A+ ++
Sbjct: 366 EPVIRVIGFKPITALPFWANVKHPYFIYPSEEDYVGSSRVFSALHQMLLRNKKMALVWFI 425
Query: 410 -GNPSNPRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD 467
+ P L A++A +E + G Q PPGM ++ LP++DDIR + + + P
Sbjct: 426 ARKGAGPVLAAMIAGEEKLDENGVQKYPPGMWILPLPFADDIR--QNPETTLNVAPEPLI 483
Query: 468 DEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEG 525
D+++ +++++ L + ++ NPSLQ HY +LQALAL+ED + +D T+P
Sbjct: 484 DQMR---VVIQQLQLPKGVYEPLRYPNPSLQWHYRILQALALDEDLPEKPEDRTIPKYRQ 540
Query: 526 M-ARPG--VVKAVEEFKLS---------------VYGDNYDEEGDVKVSEASRKRKA--A 565
+ R G V+ +E + V + D + + S+ S+K K
Sbjct: 541 IDKRAGDYVLSWADELEKQHAKTSAGAPHPTSTLVKRGSKDRASETEDSKPSKKVKVEEG 600
Query: 566 TENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ N +E + +KG L ++TV LK +L ++ S G+K LI R+
Sbjct: 601 SGNLEEEVRKHH-----EKGTLSKLTVAILKDFLTSNGRSNAGKKADLIERV 647
>gi|156061149|ref|XP_001596497.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980]
gi|154700121|gb|EDN99859.1| hypothetical protein SS1G_02717 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 645
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 171/632 (27%), Positives = 292/632 (46%), Gaps = 52/632 (8%)
Query: 23 EHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHI--AVSCIAQSLKTQIINRLYDEV 80
++ K+ V++++D S M + P++ + +T A+ C ++ +II+ D +
Sbjct: 22 DYRTQKDAVLFVIDVSRSMLTPPPPSDSKKADTDSPTLAALKCAYMIMQQRIISSPKDMM 81
Query: 81 AICFFNTR--KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGI 138
I + T K K+ L+ + LD P+A+ +K I E E+ ++ +
Sbjct: 82 GIMLYGTEETKFKDQSGLDTSVYPHCYLFTDLDVPSAQDVKALKEIVEDEEE---AKKIL 138
Query: 139 VSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
V + N L+ A + + +R+ + T++DDP K + R
Sbjct: 139 VPTEEPLDMNNLLFCANQIFTTRAPNFVSRRLFIVTDKDDPHSGDK-----PLRSVAAVR 193
Query: 199 AKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE--GDDLALFMPSAGQKLEDMKDQL 256
AKD D+G+ IEL P+S P+ EF S FY D+I + +D F P++ Q D L
Sbjct: 194 AKDLYDIGVVIELFPISTPEHEFDRSKFYDDIIYRDPLAEDAPNFGPNSLQSKGDGLSLL 253
Query: 257 RKRMF---SKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAIT--WLDSVTNHPL 306
+ SK+I KR + F I L+I +N Y ++ P T W +
Sbjct: 254 NSLILDVNSKQIPKRALFSNLPFEIGPNLNISVNGYNILHRQAPARSTYVWTEGEVLQIP 313
Query: 307 KTERSFICADTGALMQEP-AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365
E + + D+ ++Q+ K+ + G + F+ E E+K LR+ GFKP S L
Sbjct: 314 VGETTQMAEDSARVIQKTEIKKAYKFGGAQVLFTPDEQKELKNFGPSGLRIIGFKPQSML 373
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQ 423
+ ++ STF++PS+ VGST +F AL +L+ N+ + +Y +NP +VA++
Sbjct: 374 PYWASVHKSTFIYPSENGYVGSTRVFSALWEKLLKDNKMGLGWYIARKDANPAIVAILPS 433
Query: 424 DEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRID 481
E Q+ P G+ + LP++DD+R V A D + +++++
Sbjct: 434 VEKFDPATNQQIFPAGLWLYPLPFADDLRSVSAPGPII-----APDKLIDNMRIIIQQLQ 488
Query: 482 LK--DFSVCQFANPSLQRHYAVLQALALEED--DMPEIKDETVPD--------EEGMARP 529
L + + NPSLQ HY +LQALALEED D+PE D+T+P E +A
Sbjct: 489 LPKAQYDPRNYPNPSLQWHYKILQALALEEDIPDVPE--DKTIPKYRQIHKRCGEYIANW 546
Query: 530 GVVKAVEEFKLSVYGDN-YDEEGDVKVSEASRKRKAATENAAKECANYDWADLAD---KG 585
G E K +N + D E +K+K +++AK+ D +L + G
Sbjct: 547 GTTLESEYGKWRNGNENVLKRDLDEDEVEVPKKKKVLVKSSAKKLGEMDKEELKNLVANG 606
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
L++ V +LK L+ L++ G+K L+ RI
Sbjct: 607 GLEKFKVTDLKECLLGKGLNSAGKKADLMERI 638
>gi|124518454|gb|ABN13872.1| Ku seventy [Aspergillus niger]
gi|134082330|emb|CAK42345.1| unnamed protein product [Aspergillus niger]
Length = 648
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 167/648 (25%), Positives = 302/648 (46%), Gaps = 83/648 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ +D S M T P+ D T E+ A+ C ++ +II+ D +
Sbjct: 24 YKPVKDAVLFAIDVSDSML-TPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMM 82
Query: 81 AICFFNTRKKKNLQ-------DLN--AVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ F T+ K + DL+ ++F LD P+A +K + +
Sbjct: 83 GVLLFGTQASKFFEEDEDSRGDLSYPNCYLFT-----DLDVPSAHEVKGL----RALVDD 133
Query: 132 IGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
G ++S ++E S+ N L+ A + + +R+ + T+ D+P G K
Sbjct: 134 EGDSREVLSPAKEQVSMANVLFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK-----T 188
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG-------LEGDDLALFMP 243
+ RAKD DLG++IEL P+S P+ EFK S FY + L+ D A
Sbjct: 189 LRSAATVRAKDLYDLGVTIELFPISRPEHEFKNSKFYDSLPSDPEAPAYLQSDSKAATAT 248
Query: 244 SAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AIT 296
G L + L + S+ + +R F + I ++ Y L+R P +
Sbjct: 249 GDGISLLNT---LLSSINSRTVPRRTHFSNMPLELGPDFRISVSGYILLRRQAPARNSFI 305
Query: 297 WLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLR 355
WL+ K S DTG +++ ++ + G+ + FS E ++ +R
Sbjct: 306 WLNGEKPVVAKGVTSHSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPVIR 365
Query: 356 LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPS 413
+ GFKP++ L + N++ F++PS+++ VGS+ +F ALH+++LR + A+ ++ +
Sbjct: 366 VIGFKPITALPFWANVKHPYFIYPSEEDYVGSSRVFSALHQTLLRSKKMALVWFIARKGA 425
Query: 414 NPRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKK 472
P L A++A +E + G Q PPGM ++ LP++DDIR + + + P + D+++
Sbjct: 426 GPVLAAMIAGEEKLDENGVQKYPPGMWILPLPFADDIR--QNPETTLNVAPESLIDQMR- 482
Query: 473 AAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPG 530
+++++ L + ++ NPSLQ HY +LQALAL+ED + +D+T+P
Sbjct: 483 --VIVQQLQLPKGVYEPLKYPNPSLQWHYRILQALALDEDLPEKPEDKTIPKYR-----Q 535
Query: 531 VVKAVEEFKLSVYGDNYDEE-----------GDVKVSEASRKRKAATEN---AAKECANY 576
+ K ++ LS + D +++ V S+ R + TE+ + K
Sbjct: 536 IDKRAGDYVLS-WADELEKQYAKTSAAAPRPTSTLVKRGSKDRASETEDSKPSKKIKVEE 594
Query: 577 DWADLAD-------KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
D L + KG L ++TV LK +L ++ S G+K LI R+
Sbjct: 595 DSGSLEEEVRRHHKKGTLSKLTVAILKDFLTSNGRSNAGKKADLIERV 642
>gi|400596414|gb|EJP64188.1| ku70 protein [Beauveria bassiana ARSEF 2860]
Length = 642
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 171/647 (26%), Positives = 303/647 (46%), Gaps = 62/647 (9%)
Query: 12 DDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSL 68
+++E D E + ++A K+ V+ ++ S M P++ + + + A+ C +
Sbjct: 11 EEDEGDQEIDETSYKAQKDAVLLAIEVSESMLKAPPPSDSKKADRDSPVQAALKCAYHFM 70
Query: 69 KTQIINRLYDEVAICFFNTRKKKNLQDLNA--------VFVFNVAEREQLDRPTARFIKE 120
+ +II+ D + I F T K + D N ++F LD P+A +K
Sbjct: 71 EQRIISNPKDMIGILLFGTEKTRFQLDENGRSGLGYPHCYLFT-----DLDVPSADDVKA 125
Query: 121 FDHIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
+ E E E G I+ + E S+ N L+ A + ++ +R+ L T+ D+P
Sbjct: 126 LKSLVEDEEDEDG----IIKPTSETVSMSNVLFCANQIFTTRAANFGSRRLFLVTDNDNP 181
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG----LEG 235
+ K A RAKD DLG+SI+L P+S D +F ++ FY D++ E
Sbjct: 182 HSTDKAARS-----AAAVRAKDLYDLGVSIDLFPISHQDSKFDLAKFYDDILYRDPLAEA 236
Query: 236 DDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPT 290
+ + + +G L ++ L + SK+ KR + F IA GL I + Y +I
Sbjct: 237 NSQEVAVSKSGDGL-NLLTSLISNINSKQTPKRSLFSNLPFEIAPGLRISVKGYNIIHRQ 295
Query: 291 VPG--AITWLDSVTNHPLKTERSFICAD-TGALMQEPAKRFQPYKGENIKFSVQELSEIK 347
P WLD E + I D T + + K+ + GE + FS +E +K
Sbjct: 296 APARTCYIWLDGEKPQLAVGETTRIAEDSTRTVEKGEMKKAYKFGGEYVYFSPEEQKSLK 355
Query: 348 RVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA 407
+ +R+ GFK + + +++ S+F++PS+++ VGST +F AL +L+ ++ A+A
Sbjct: 356 DFGSPIIRIIGFKSRRSIPIWSSVKKSSFIYPSEEDYVGSTRVFTALWGKLLKSDKVALA 415
Query: 408 F--YGNPSNPRLVALVA----QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
+ +NP L A++ DE +G P G+ + LP++DD+R ++
Sbjct: 416 WCIVRTNANPMLAAIMPSKPQSDE--DSGTPYLPAGLWLYPLPFADDLRDIKP----PGK 469
Query: 462 VPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
+ +ASDD + +++++ L ++ ++ NPSLQ HY +LQALALEE+ +D T
Sbjct: 470 MAQASDDLKTQMRTIIQQLQLPKAMYNPTKYPNPSLQWHYKILQALALEEEVPESAEDAT 529
Query: 520 VPDEEGMAR--PGVVK-----AVEEFKLSVYGDNYDEEGDVKVSE--ASRKRKAATENAA 570
+P + +++ G ++ E K + E D ++ E A R + A+ +
Sbjct: 530 LPKFKAISKRAGGYLEDWSETLSREAKSTTEARAVKRENDDELPERPAKRGKTASAQPGG 589
Query: 571 KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
E + G + +MTV +LK LST+GRK +I RI
Sbjct: 590 SELTSAQVKAAVGDGSISKMTVAQLKDVAAERGLSTSGRKADIIERI 636
>gi|396479528|ref|XP_003840776.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
gi|312217349|emb|CBX97297.1| similar to TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Leptosphaeria maculans JN3]
Length = 654
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 179/648 (27%), Positives = 311/648 (47%), Gaps = 73/648 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D SP M +ED+ ++ A+ C Q ++ +II+ D +
Sbjct: 25 YKTIKDAVLFAIDVSPTMLERPPKSEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMG 84
Query: 82 ICFFNTRKKKNLQDLNAVF--VFNVAEREQLDRPTARFIKEF-DHIEESFEKEIGSQYGI 138
I F T ++ +L+D ++ F + +A+ LD P+A+ +K D +E+ E E I
Sbjct: 85 ILLFGT-EQTDLKDGDSTFQHCYLLAD---LDVPSAQDVKSLRDLVEDEEEAE-----KI 135
Query: 139 VSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
+ ++E S+ L+ A + + + +R+ L T+ D P K A D T +
Sbjct: 136 LKPAKEGYSISTVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---AKIKADKD---TAVT 189
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AGQK 248
RA+D DLG +I+L P+S P F S FY D++ D + + S +G+
Sbjct: 190 RARDLYDLGCTIDLFPISQPGHTFDRSRFYDDLVYPTSPSDPDAPISLASTTKIAKSGEG 249
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLS----IELNTYALIRPT--VPGAITWLDSVT 302
+ +K QL + SK +R F + L I + Y LI+ V W+
Sbjct: 250 ISLLK-QLISSINSKATPRRALFTLPLELGPDFRIGVKGYVLIKRQEHVKSCYVWVGGEK 308
Query: 303 NHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLHGF 359
+ T + AD A E + + YK GE I F+ +E+++I++ +R+ GF
Sbjct: 309 PQ-IATSSTSHLADDSARTIEKTELQKAYKFGGEAITFTPEEITKIRQCFGDPVIRIIGF 367
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRL 417
KP+S L + N+ +TF++PS+ + +GST +F AL + +L+ + + ++ N P L
Sbjct: 368 KPISCLPLWANVNKATFLYPSEVDYIGSTRVFAALQQKLLKSQKMGLVWFIARRNASPAL 427
Query: 418 VALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAAL 476
AL+ +E + A G Q PPG+ +I LP++DD+R + D+ R +++ K +
Sbjct: 428 CALIPSEEKLNADGEQTTPPGLWLIPLPFADDLR---QFPEPPDSPLRTTNELTDKMRLI 484
Query: 477 MKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE-TVPDE---------- 523
++++ L + ++ NP+LQ Y VLQALAL ED++PE D+ T+P
Sbjct: 485 IEQLQLPKGMYDPSKYPNPNLQWFYRVLQALAL-EDEIPEKPDDKTIPRYKQIDKRCGEY 543
Query: 524 -EGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYD----- 577
E AR V + K S+ D ++ E KR E AK+ D
Sbjct: 544 IEDFAREFNVAFASQQKTSL-ADRTAKKRGAGGQEMPAKR-VKKEPQAKQIEGGDDEAGM 601
Query: 578 ----WADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
A+L DKG++ + TV L+ +L ST G+K L+ R+ ++
Sbjct: 602 TDQQMAELNDKGQISKQTVAVLRDWLAQRGQSTVGKKAELLERVQMYV 649
>gi|303319009|ref|XP_003069504.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109190|gb|EER27359.1| ATP-dependent DNA helicase ii, 70 kDa subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320041120|gb|EFW23053.1| hypothetical protein CPSG_00952 [Coccidioides posadasii str.
Silveira]
Length = 647
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 166/643 (25%), Positives = 297/643 (46%), Gaps = 75/643 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCP---AEDQTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
+++ K+ V++ ++ S M T P ++ E+ A+ C ++ +II+ D +
Sbjct: 24 YKSVKDAVLFAIEVSESML-TAAPNPTSKRARPESPATAALKCAYHLMQQRIISNPKDMI 82
Query: 81 AICFFNTRKKKNLQD---------LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ + T K D ++F LD P A +KE + E E
Sbjct: 83 GVLLYGTESSKFYDDDEDGRGSLPYPHCYLFT-----DLDVPAASDVKELRAL---VEDE 134
Query: 132 IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
+ +V S+ N L+ A + + + +R+ + T+ D+P K +
Sbjct: 135 DRAAEILVPSKEPVSMANVLFCANQIFTTKAPNFSSRRLFIVTDNDNPHSKDKV-----L 189
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI------GLEGDDLALF-MPS 244
RAKD DLG+ IEL +S PD +F S FY DMI E D + +
Sbjct: 190 KSAATVRAKDLYDLGVVIELFSISTPDHDFDTSKFYDDMIYKASPTDPEAPDYSCTSTKT 249
Query: 245 AGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITW 297
+G + + L + SK + +R F + I ++ + + + P W
Sbjct: 250 SGADGISILNSLLSSIHSKSVPRRALFSNLPLELGPEFRISVSGFLIFKRQAPARSCYVW 309
Query: 298 LDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
L +K + + D+ +++ ++ + GE+I F+ +E S ++ +R+
Sbjct: 310 LGGEQPQIVKGVTTLVADDSAREVEKWEIRKAYKFGGEHIAFTQEEQSALRNFGDPVIRI 369
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GFKP+S L + + + STF++PS+ VGST +F AL +++L+ +FA+ ++ N
Sbjct: 370 IGFKPMSSLPIWASTKQSTFIYPSEAGFVGSTRVFSALQQTLLKQKKFALVWFVARKNAA 429
Query: 415 PRLVALVAQDEIVRAG-GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P + AL+ +E + QV PPGM + LP++DDIR E H+ P D++++
Sbjct: 430 PVMAALIPGEEKLDDNDAQVIPPGMWIQPLPFADDIRQNPETHNIV--APEPLIDKMREI 487
Query: 474 AALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG-- 530
+++ + + ++ NPSLQ HY +LQALAL+ED + +D+T+P + + R G
Sbjct: 488 IQVLQ-LPKGRYDPQRYPNPSLQWHYRILQALALDEDLPDQAEDKTIPKYKQIDKRAGEH 546
Query: 531 VVKAVEEFKLSVY----------------GDNYDEEGDVKVSEASRKRKAATENAAKECA 574
V++ EE + + EGD + A+++ KA + A+
Sbjct: 547 VLEWGEELETQKRLLENSKPITSTLAKRPAPSRKAEGDER---ATKRVKAESTGDAEVKM 603
Query: 575 NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+Y +KG L ++TV LK +L +HNLS TG+K LI R+
Sbjct: 604 HY------EKGSLNKLTVTILKDFLSSHNLSGTGKKADLIDRV 640
>gi|429862115|gb|ELA36774.1| ku70 protein [Colletotrichum gloeosporioides Nara gc5]
Length = 649
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 168/644 (26%), Positives = 292/644 (45%), Gaps = 76/644 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTD---ETHFHIAVSCIAQSLKTQIINRLYDEV 80
++A K+ V+ +D S M PA + ++ A+ C Q ++ +II+ D +
Sbjct: 24 YKAQKDAVLLAIDVSSSMLQPP-PASNSKKADKDSAVQAALKCAYQLMQQRIISNPKDMM 82
Query: 81 AICFFNTRKKKNLQDLNA-------VFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
I FF T K K ++ ++F LD P A +K + +E
Sbjct: 83 GILFFGTEKSKFQEESGRSGLGYPHCYLFT-----DLDVPAAEDVKALKTLVGVDGEEGE 137
Query: 134 SQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
+ ++ ++E+ + N + A + ++ +R+ + T+ D P G K A
Sbjct: 138 DEDEVLVPAKESVQMANVFFCANQIFTTKAANFGSRRLFIITDNDSPHGDDKAAKS---- 193
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---------------GLEGDD 237
+ RAKD DLG+ IEL P++ D++F ++ FY D+I GD
Sbjct: 194 -ASAVRAKDLYDLGVIIELFPITRDDKKFDLTRFYDDIIYRDQTAEANLSEIRNSRSGDG 252
Query: 238 LALFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--A 294
+ L L + + + KR + + F IA GL I + Y ++ P +
Sbjct: 253 ITL--------LNSLISNINSKETPKRSLFSNLPFEIAPGLRISVKGYNILHRQTPARTS 304
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQEPA-KRFQPYKGENIKFSVQELSEIKRVSTGH 353
WLD E + I D+ +++P K+ + GE + F+ +E +K T
Sbjct: 305 YIWLDGEKPQLATGETTRIAEDSARTVEKPEFKKAYKFGGEYVHFTTEEQKSLKDFGTPI 364
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKP S L + +++ STF+FPS+++ VGST +F AL + +L+ + VA+ S
Sbjct: 365 IRIIGFKPRSMLPFWASVKKSTFIFPSEEDYVGSTRVFTALWQKLLKYKKIGVAWAITRS 424
Query: 414 --NPRLVALVAQDEIVRAGGQVE--PPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 469
NP LVA++ E P G+ + LP++DD+R E +D + R++++
Sbjct: 425 NANPILVAIIPSHEQSEDDSTTPYLPAGLWLTPLPFADDLREGPEPPAD---LVRSTNEL 481
Query: 470 VKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA 527
+ +++++ L ++ ++ NPSLQ HY +LQ LALEE+ + +D T P + ++
Sbjct: 482 TDQMRVIVQQLQLPKAMYNPKKYPNPSLQWHYKILQVLALEEEYPEKAEDLTEPKYKAIS 541
Query: 528 -RPGVVKAVEEF-------------KLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC 573
R G +EE+ K ++ D D++ A KA +
Sbjct: 542 KRAGGY--LEEWAETLQAEAKNVMAKQAIKRDAEDDDDGRPAKRAKAAPKAKVSGSGMTT 599
Query: 574 ANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
A A AD L +M V +LK L A LST G+K L+ R+
Sbjct: 600 AQLKAA--ADADTLGKMLVADLKDVLAARGLSTAGKKAELVERL 641
>gi|342870008|gb|EGU73367.1| hypothetical protein FOXB_16128 [Fusarium oxysporum Fo5176]
Length = 644
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 170/634 (26%), Positives = 292/634 (46%), Gaps = 61/634 (9%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++A K+ ++ +D M P++ + ++ A+ C ++ +II+ D +
Sbjct: 24 YKAQKDAILLAIDVRKSMLEPPPPSDSKKADRDSPVQAALKCAYHLMEQRIISNPKDMMG 83
Query: 82 ICFFNTRKKKNLQDLNA--------VFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
I F T+K K ++ ++F LD P A +K + E E E
Sbjct: 84 ILLFGTKKSKFQDSVDGRSGLGYPHCYLFT-----DLDVPAAEDVKVLKALVEDGEDE-- 136
Query: 134 SQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
+++ S E S+ N L+ A + ++ +R+ + T+ D+P S K A
Sbjct: 137 --DEVLTPSDEPVSMSNVLFCANQIFTTKAANFGSRRLFIVTDNDNPHASDKQAKS---- 190
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL----EGDDLALFMPSAGQK 248
RAKD DLGI I+L P++ DE+F ++ FY D+I E + + +G
Sbjct: 191 -AAAVRAKDLYDLGILIDLFPITRGDEKFDLNKFYDDIIYRDPVGEANMTEVRTSKSGDG 249
Query: 249 LEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPG--AITWLDSV 301
L + + L + SK+ KR + F IA GL I + Y ++ P WLD
Sbjct: 250 LT-LLNSLISNVNSKQTAKRALFSNLPFEIAPGLRISVKGYNIVHRQTPARTCYIWLDGE 308
Query: 302 TNHPLKTERSFICAD-TGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
E + I D T + + K+ + GE + FS E +K + +R+ GFK
Sbjct: 309 KPQIATGETTRIAEDSTRTVEKAEIKKAYKFGGEYVYFSPDEQKSLKDFGSPIIRIIGFK 368
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLV 418
P S L + + + STF+FPS+++ VGST +F AL + +L+ ++ VA+ +N P L
Sbjct: 369 PRSLLPVWASTKKSTFIFPSEEDYVGSTRVFTALWQKLLKDDKMGVAWCITRANAQPMLA 428
Query: 419 ALVAQDEIVRA--GGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAAL 476
A++ E A G P G+ + LP+ DD+R + + V R+S + + +
Sbjct: 429 AIIPSRERSDADSGTPYLPAGLWIYPLPFQDDLRNI----NPPSEVLRSSGELTTQMRTI 484
Query: 477 MKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA-RPG--- 530
++++ L + ++ NP+LQ HY +LQALALEE+ + D T P + ++ R G
Sbjct: 485 IQQLQLPKAMYDPLKYPNPALQWHYRILQALALEEEVPEKADDATEPKYKAISKRAGGYL 544
Query: 531 ----VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLA---D 583
E K++ E D + +K + ++E A +++ A L +
Sbjct: 545 EEWSESLEEESGKVANKKSTKRETDDEDMDRPVKKSRGSSEKAT--GSSFSMAQLKAAIE 602
Query: 584 KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G +++MTV +LK L +ST GRK LI RI
Sbjct: 603 GGTIQKMTVVQLKDILATKGMSTAGRKVELIERI 636
>gi|407918739|gb|EKG12005.1| DNA-binding SAP [Macrophomina phaseolina MS6]
Length = 660
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 173/650 (26%), Positives = 305/650 (46%), Gaps = 81/650 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D S M P++ + ++ A+ C Q ++ +II+ D +
Sbjct: 29 YKTVKDAVLFAIDVSHSMMKKPLPSDSKKADRDSPTSAALKCAYQLMQQRIISHPNDMMG 88
Query: 82 ICFFNTRKKKNLQDLNA-----VFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY 136
+ F T + K QD A + + LD P A +K ++ ++E ++
Sbjct: 89 VLLFGTEQSK-FQDEGANGRGGLQYPHCYLLTDLDVPAANDVKRLRNL---VQEEEEAEE 144
Query: 137 GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
+V S+ N L+ A + ++ +R+ L T+ D+P K ++ +
Sbjct: 145 LLVPSEEPVSMANVLFCANQIFTTKAANFTSRRLFLVTDNDNPHADDK-----NLRQAAA 199
Query: 197 QRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--------------------GLEGD 236
RAKD DLG+ IEL P++ P+ F ++FY D++ GD
Sbjct: 200 VRAKDLYDLGVIIELFPIAHPERGFDRANFYDDIVYRPPVSDPEAPAPVTEAANTSERGD 259
Query: 237 DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIR--PTVPGA 294
++L L+ + + + +R + + F I GL I + Y LI+ V
Sbjct: 260 GISL--------LQSLLSNINSKAAPRRALFSLPFEIGPGLKIGVKGYILIKRQEKVRSC 311
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTG 352
W++ S I DT +Q+ R + YK GE + F+ +E ++
Sbjct: 312 YVWMNGERPQIAVAASSKIAEDTAREVQKTEIR-KAYKFGGETVSFTEEETKALRYFGDP 370
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNP 412
+R+ GFKPLS L ++ NLR + F++P++ + +GST +F AL +++L+ + A+A++
Sbjct: 371 VVRIIGFKPLSMLPEWANLRSAIFLYPTEADFIGSTRVFSALQQNLLQKQKMAIAWFIPR 430
Query: 413 SN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 469
N P L AL+ ++++ QV PPG+ I LPY DDIR + A+ RASD
Sbjct: 431 RNAVPTLAALIPGKEKLGDRNEQVRPPGLWAITLPYVDDIR-----RNPETALVRASDRL 485
Query: 470 VKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE-TVPDEEGM 526
+++ + L ++ ++ NP+LQ Y +LQA+AL ED++P+ D+ TVP +
Sbjct: 486 TDIMRDIVQNLTLPKGEYDPSRYPNPALQWFYRILQAIAL-EDELPDKPDDRTVPKHRQI 544
Query: 527 -ARPG--VV---KAVEE----FKLSVYGDNYDEEG-DV--KVSEASRKRKAATENAAKEC 573
R G VV KA+EE + S +E G DV + + A+ KR +E A
Sbjct: 545 NKRVGERVVEWGKALEEEYGYWTQSARKRRAEEAGEDVPGRAASATNKR-LKSEAGAVPS 603
Query: 574 ANYDWADLA------DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
D D A +KG + ++TV LK + + ++S G+K ++ RI
Sbjct: 604 KTSDAIDDAEMRSRYEKGTIAKLTVPVLKDWAHSKHISVAGKKADVVERI 653
>gi|281311975|dbj|BAI58987.1| Ku70 protein [Colletotrichum higginsianum]
Length = 651
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 168/640 (26%), Positives = 289/640 (45%), Gaps = 68/640 (10%)
Query: 24 HEATKEYVVYLVDASPKMFS--TTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++A K+ V++ +D S M T ++ ++ A+ C ++ +II+ D +
Sbjct: 26 YKAQKDAVLFAIDVSSSMLQRPPTSGSKKADKDSAVEAALKCAYHLMQQRIISNPRDMMG 85
Query: 82 ICFFNTRKKKNLQDLNA-------VFVFNVAEREQLDRPTARFIKEFDH-IEESFEKEIG 133
I FF T K K ++ ++F LD P A +K + E+
Sbjct: 86 ILFFGTEKSKFQEESGRSGLGYPHCYLFT-----DLDIPAAEDVKALKTLVGADGEEGED 140
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
+V E + N + A + ++ +R+ + T+ D+P G+ K D
Sbjct: 141 EDEVLVPAEEEVQMANVFFCANQIFTTKAANFGSRRLFIITDNDNPHGNNK-----DAKS 195
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--------------GLEGDDLA 239
RAKD DLG+ IEL P++ DE+F + FY D+I GD L
Sbjct: 196 AAAVRAKDLYDLGVVIELFPITREDEKFNLGKFYDDIIYRDQTAEALSEVRNSKSGDGLT 255
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--AIT 296
L L + + + +KR + + F IA GL I + Y +I P +
Sbjct: 256 L--------LNSLISNINSKETTKRALFSNLPFEIAPGLRISVKGYNVIHRQTPARTSYI 307
Query: 297 WLDSVTNHPLKTERSFICADTGALMQEPA-KRFQPYKGENIKFSVQELSEIKRVSTGHLR 355
+LD E + I D+ +++ K+ + GE + F+ +E +K T +R
Sbjct: 308 YLDGEKPQLAIGETTRIAEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIR 367
Query: 356 LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN- 414
+ GFKP S L + ++ STF+FPS+++ VGST +F AL + +L+ + +A+ +N
Sbjct: 368 IIGFKPRSMLPFWACVKKSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANA 427
Query: 415 -PRLVALVAQDEIVR--AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVK 471
P LVA++ E +G P G+ + LP++DD+R E S+ + +S++ +
Sbjct: 428 SPILVAIIPSHEKSEDDSGTPYLPAGLWLYPLPFADDLREGPEPPSN---LVVSSNELID 484
Query: 472 KAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR- 528
+ +++++ L F+ ++ NPSLQ HY +LQ LALEE+ + +D T P + +++
Sbjct: 485 RMRVIVQQLQLPKAMFNPKKYPNPSLQWHYKILQVLALEEEYPEKAEDLTEPKYKAISKR 544
Query: 529 -PGVVKAVEEFKLSVYGDNYDEEGDVK-------VSEASRKRKAATENAAKECANYDWAD 580
G + E L V N + +K +++ KAA + A
Sbjct: 545 AGGYLDEWAEV-LQVETKNALAKAAIKRDIDDDDDERPAKRVKAAPRSVKVSGQGLTTAQ 603
Query: 581 LA---DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
L D G L +M V +LK L A STTG+K LI R+
Sbjct: 604 LKAAIDGGGLSKMLVADLKDILAARGQSTTGKKTDLIERV 643
>gi|350636255|gb|EHA24615.1| hypothetical protein ASPNIDRAFT_48713 [Aspergillus niger ATCC 1015]
Length = 639
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 165/633 (26%), Positives = 294/633 (46%), Gaps = 87/633 (13%)
Query: 44 TTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQ------ 94
T P+ D T E+ A+ C ++ +II+ D + + F T+ K +
Sbjct: 29 TPRPSADPKKHTQESPTTAALKCAYHFMQQRIISNPQDMMGVLLFGTQASKFFEEDEDSR 88
Query: 95 -DLN--AVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN-SLYNA 150
DL+ ++F LD P+A +KE + + G ++S ++E S+ N
Sbjct: 89 GDLSYPNCYLFT-----DLDVPSAHEVKEL----RALVDDEGDSREVLSPAKEQVSMANV 139
Query: 151 LWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIE 210
L+ A + + +R+ + T+ D+P G K + RAKD DLG++IE
Sbjct: 140 LFCANQIFTSRAPNFLSRRLFIITDNDNPHGDDK-----TLRSAATVRAKDLYDLGVTIE 194
Query: 211 LLPLSPPDEEFKVSHFYADMIG------------LEGDDLALFMPSAGQKLEDMKDQLRK 258
L P+S P+ EFK S FY D+I L+ D A G L + L
Sbjct: 195 LFPISRPEHEFKNSKFYDDIIYKSLPSDPEAPAYLQSDSKAATATGDGISLLNT---LLS 251
Query: 259 RMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERS 311
+ S+ + +R F + I ++ Y L+R P + WL+ K S
Sbjct: 252 SINSRTVPRRTHFSNMPLELGPDFRISVSGYILLRRQAPARNSFIWLNGEKPVVAKGVTS 311
Query: 312 FICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHN 370
DTG +++ ++ + G+ + FS E ++ +R+ GFKP++ L + N
Sbjct: 312 HSADDTGRTVEKWEIRKAYKFGGDQVTFSPDEQKALRDFGEPVIRVIGFKPITALPFWAN 371
Query: 371 LRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVR 428
++ F++PS+++ VGS+ +F ALH+++LR + A+ ++ + P L A++A +E +
Sbjct: 372 VKHPYFIYPSEEDYVGSSRVFSALHQTLLRSKKMALVWFIARKGAGPVLAAMIAGEEKLD 431
Query: 429 AGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--F 485
G Q PPGM ++ LP++DDIR + + + P + D+++ +++++ L +
Sbjct: 432 ENGVQKYPPGMWILPLPFADDIR--QNPETTLNVAPESLIDQMR---VVVQQLQLPKGVY 486
Query: 486 SVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGD 545
++ NPSLQ HY +LQALAL+ED + +D+T+P + K ++ LS + D
Sbjct: 487 EPLKYPNPSLQWHYRILQALALDEDLPEKPEDKTIPKYR-----QIDKRAGDYVLS-WAD 540
Query: 546 NYDEE-----------GDVKVSEASRKRKAATEN---AAKECANYDWADLAD-------K 584
+++ V S+ R + TE+ + K D L + K
Sbjct: 541 ELEKQYAKTSAAAPRPTSTLVKRGSKDRASETEDSKPSKKIKVEEDSGSLEEEVRRHHKK 600
Query: 585 GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G L ++TV LK +L ++ S G+K LI R+
Sbjct: 601 GTLSKLTVAILKDFLTSNGRSNAGKKADLIERV 633
>gi|336270558|ref|XP_003350038.1| hypothetical protein SMAC_00927 [Sordaria macrospora k-hell]
gi|111120025|emb|CAJ41424.1| ATP-dependent DNA helicase II, 70 kDa subunit [Sordaria macrospora]
gi|380095429|emb|CCC06902.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 646
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 172/654 (26%), Positives = 303/654 (46%), Gaps = 53/654 (8%)
Query: 1 MELDPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHF 57
M DD R D +E D E + +++ K+ V++ ++ S M D+ ++
Sbjct: 1 MSWRKDDEERPDSDEGDEELDENDYKTQKDAVLFAIEVSKSMLKPPAATGDKKADKDSAL 60
Query: 58 HIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDL-NAVFVFNVAEREQLDRPTAR 116
A+ C Q ++ +II + D + + F T K K D N + LD P A
Sbjct: 61 TAALKCAYQIMQQRIIAQPRDMMGVLLFGTEKSKFRDDSGNGTGYPHCYLLSDLDVPGAE 120
Query: 117 FIKEFDHIEESFEKEIGSQYGIVSGSRENSLY-NALWVAQGLLRKGSSKTADKRILLFTN 175
+K+ + ++ + I+ S+E + N L+ A + ++ +R+ + T+
Sbjct: 121 DVKKL----RALVEDDEDEDEIMVPSKEPVIMSNMLFCANQVFTTNAANFGSRRLFIVTD 176
Query: 176 EDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---- 231
DDP K A + RAKD DLGI IEL P+S ++F +S FY D+I
Sbjct: 177 NDDPHAGDKQAKS-----SAAVRAKDLYDLGIVIELFPISREGKKFDLSKFYDDIIYRDP 231
Query: 232 GLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYAL 286
E +L S + + L + SK+ KR + F +A GL+I + Y
Sbjct: 232 AAEVGELGGPKTSKAGDGLTLLNSLISNINSKQTPKRSYFSNLPFELAPGLTISVKGYIP 291
Query: 287 IRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELS 344
+ P ++ + D A E + + YK GE+I F +EL+
Sbjct: 292 LNRQTPSRSCYVYEGEEQAQVVQSETAQVDFAARTVEKTELRKGYKFGGEHICFKPEELA 351
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
E+K++ LR+ GFK S + + +++ S F+FPS+++ VGST +F AL + +L+ ++
Sbjct: 352 ELKQMGKKTLRIIGFKKRSKIPSWASVKKSLFIFPSEEQYVGSTRVFSALWQKLLKDDKV 411
Query: 405 AVAFYGNPSN--PRLVALVAQ----DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSD 458
+A++ N P +VA+ DE + P G+ + LP++DD+R V+ +
Sbjct: 412 GIAWFVARENAHPVMVAIFPSGNPDDE--ESNTPYLPAGLWLYPLPFADDVRSVDHVT-- 467
Query: 459 TDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPE-I 515
A R +D+ + +++ + L + ++ NPSLQ HY ++QA+AL+E +MPE +
Sbjct: 468 --APARPADELTDQMRQVIQNLQLPKAMYDPRKYPNPSLQWHYRIVQAIALDE-EMPESM 524
Query: 516 KDETVPDEEGMAR--PGVVKAVEEF---KLSVYGDNY-------DEEGDVKVSEASRKRK 563
+D T+P + + G + +E K S +N D++ + A +K
Sbjct: 525 EDLTLPKYRQIDKRVGGYLAEWKEMLAKKASDLQNNRAFKREFEDDDDERPAKRAKPTKK 584
Query: 564 AATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
A + +N D ++G L +MTV ELK + + +ST GRK L+ R+
Sbjct: 585 ATSGGGGPANSNADLKKAFEQGMLGKMTVAELKDIMASKGISTAGRKAELVERL 638
>gi|451850214|gb|EMD63516.1| hypothetical protein COCSADRAFT_190760 [Cochliobolus sativus
ND90Pr]
Length = 653
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 306/661 (46%), Gaps = 101/661 (15%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ + SP M +ED+ E + A+ C Q ++ +II+ D +
Sbjct: 26 YKTIKDAVLFAIHVSPSMLEKPPKSEDKKAERDSPASAALKCAYQLMQQRIISNPNDMMG 85
Query: 82 ICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEF-DHIEESFEKEIGSQYGIVS 140
I F T K+ +L+D + LD P+A+ +K D +E+ E E I+
Sbjct: 86 ILLFGT-KETDLKDGDT----------DLDVPSAQDVKRLRDMVEDEEEAE-----KILK 129
Query: 141 GSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+++ S+ L+ A + + + +R+ L T+ D P +K A D T RA
Sbjct: 130 PAKDGASIATVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VKAKADKDAAVT---RA 183
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AGQKLE 250
+D DLG +++L P+S PD F S FY D++ D + +PS +G+ +
Sbjct: 184 RDLYDLGCTVDLFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGEGIS 243
Query: 251 DMKDQLRKRMFSKRIVKRISFII----ANGLSIELNTYALIRPT--VPGAITWLDSVTNH 304
+K QL + SK +R F + L I + Y LI+ V W+
Sbjct: 244 LLK-QLISSINSKATPRRALFSLPLELGPDLKIGVKGYILIKRQEHVKSCYVWVGGEKPQ 302
Query: 305 PLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLHGFKP 361
+ + + + DT A E A+ + YK G+ I F+ +E+++I++ +R+ GFKP
Sbjct: 303 IVTSSTTHMADDT-ARTVEKAELRKAYKFGGDAITFTPEEITKIRQCFGEPVIRIIGFKP 361
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVA 419
LS + + N STF++PS+ + +GST +F AL R +L+ + + ++ N P L A
Sbjct: 362 LSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIPRRNAAPTLAA 421
Query: 420 LVAQDEIV-RAGGQVEPPGMHMIYLPYSDDIR----PVEELHSDTDAVPRASDDEVKKAA 474
L+ +E G QV PPG+ ++ LP++DDIR P EE TDA+ K
Sbjct: 422 LIPSEEKTNEEGEQVMPPGLWLVPLPFADDIRQFPTPPEEPLKTTDAL-------TDKMR 474
Query: 475 ALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR-PGV 531
+++++ L + ++ NP LQ Y +LQALALEE ++PE PD++ + R +
Sbjct: 475 LIIEQLQLPKGIYDPSRYPNPDLQWFYRILQALALEE-ELPE-----HPDDKTIPRFKQI 528
Query: 532 VKAVEEFKLSVYGDNYDE--EGDVKVSEASRKRKAATENAAKECANYD------------ 577
K E+ + YG + E K + A R + A + + A+ +
Sbjct: 529 DKRCGEY-IEDYGKEFQEVYAQQQKSALAHRTKPTAKKRPGRADADVEEKNPVAKRVKKE 587
Query: 578 -----------------WADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
AD+ + G++ + TV LK +L A S G+K L+ R+ +
Sbjct: 588 SKGADGGDEDGGMTDQQMADINNSGQISKQTVAVLKQWLGARGQSIAGKKADLLERVQEY 647
Query: 621 M 621
+
Sbjct: 648 L 648
>gi|340960213|gb|EGS21394.1| hypothetical protein CTHT_0032510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1710
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 165/645 (25%), Positives = 300/645 (46%), Gaps = 71/645 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQ------TD-ETHFHIAVSCIAQSLKTQIINRL 76
++ K+ V++ +D S M PA TD ++ A+ C + ++ +II +
Sbjct: 24 YKTQKDAVLFAIDVSASMLRPPSPATSNDKKAAATDRDSAVAAALKCAYKVMQQRIIAQP 83
Query: 77 YDEVAICFFNTRKKKNLQDLNAVFVFNVAER----EQLDRPTARFIKEFDHIEESFEKEI 132
D + + FNT K K ++ L+ P A +K + E +
Sbjct: 84 NDMMGVLLFNTHKSKFREEQPGGHTGAAYPHCYLLVDLNVPGADDVKRLRALAEDGDDPE 143
Query: 133 GSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
G +V+ S+ N L+ A + + +R+ + T+ DDP K A +
Sbjct: 144 GI---LVASDEPVSMANVLFCANQVFTTNAPNFGSRRLFIITDNDDPHAKDKSAKSSAAV 200
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSA------G 246
R AKD DLGI +EL P++ +++F ++ FY D+I + MP A G
Sbjct: 201 R-----AKDLYDLGIVVELFPITRGEDKFDLAKFYDDII-YRDPAVEAIMPDAVKTSRAG 254
Query: 247 QKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAI--TWLD 299
L + + L + SK+ KR + F +A GL+I + Y ++ P W+
Sbjct: 255 DGLS-LLNSLISNINSKQTPKRSFFSNLHFELAPGLTISIKGYQILHRQKPQRTYPIWMG 313
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTGHLRLH 357
P+ + D+ A + ++ + +K GE I+F +E + ++ + LRL
Sbjct: 314 G--EKPMLAHPEAVRVDSEARTVDKSEIMKAWKFGGEFIRFKPEEAAALREFGSKVLRLI 371
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNP---SN 414
GFKP S L + +++ S F++PS++ VGST +F AL + +L+ ++ +A++ P S
Sbjct: 372 GFKPRSMLPSWASVKKSVFIYPSEELFVGSTRVFSALWQKLLKDDKIGIAWF-IPRVNSQ 430
Query: 415 PRLVALVAQDEIVRAGGQVE--PPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKK 472
P++VA++ + G P G+ + LP++DD+R V D A P+ +D+ K
Sbjct: 431 PQIVAIIPSENPDEEGAATPYLPAGLWLYPLPFADDVRKV-----DASAPPKKADELATK 485
Query: 473 AAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE---TVPDEEGMA 527
++ + L ++ ++ NP+LQ HY VLQA+AL ED++P+ D+ T+P +A
Sbjct: 486 MREIVGNLQLPKGIYNPLKYPNPALQWHYRVLQAMAL-EDEVPDENDKEDLTIPKYRQIA 544
Query: 528 RPGVVKAVEEFK-------------LSVYGDNYDEEGDVKVSEASRKRKAATEN--AAKE 572
+ V + E+K ++ + DE+G V++ +R E + +
Sbjct: 545 K-RVGGYMAEWKELLEEKTKAFIKSRALKREAEDEDGGRPVAKRARTVPTIKEGSVSGSK 603
Query: 573 CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
N ++ + G LK MTV +LK L + +S TG+K L+ ++
Sbjct: 604 TGNAKLKEMFENGTLKNMTVADLKDVLASKGVSATGKKGQLLEKL 648
>gi|310795234|gb|EFQ30695.1| ATP-dependent DNA helicase II [Glomerella graminicola M1.001]
Length = 652
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 171/642 (26%), Positives = 291/642 (45%), Gaps = 71/642 (11%)
Query: 24 HEATKEYVVYLVDASPKMFS--TTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVA 81
++A K+ ++ +D S M T ++ ++ A+ C ++ +II+ D +
Sbjct: 26 YKAQKDAILLAIDVSASMLQRPQTSGSKKADKDSAVEAALKCAYHLMQQRIISNPRDMMG 85
Query: 82 ICFFNTRKKKNLQDLNA--------VFVFNVAEREQLDRPTARFIKEFDH-IEESFEKEI 132
I FF T K K Q+ +A ++F LD P A +K + E+
Sbjct: 86 ILFFGTEKSK-FQEESARSGLGYPHCYLFT-----DLDIPAAEDVKALKTLVGADGEEGE 139
Query: 133 GSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
+V E + N + A + ++ +R+ + T+ DDP A D
Sbjct: 140 DEDEVLVPAKDEVQMANVFFCANQIFTTKAANFGSRRLFIITDNDDPH-----AKNKDAK 194
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---------------GLEGDD 237
RAKD DLG+ IEL P++ D++F + FY D++ GD
Sbjct: 195 SAAAVRAKDLYDLGVIIELFPITRDDKKFDLGKFYDDIVYRDQIAEANLSEVRSSKSGDG 254
Query: 238 LALFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--A 294
L+L L + + + KR + + F IA GL I + Y +I P +
Sbjct: 255 LSL--------LNSLISNINSKETPKRALFSNLPFEIAPGLRISVKGYNVIHRQTPARTS 306
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQEPA-KRFQPYKGENIKFSVQELSEIKRVSTGH 353
+LDS E + I D+ +++ K+ + GE + F+ +E +K +
Sbjct: 307 YIYLDSDRPQLAHGETTRIAEDSARTVEKTEFKKAYKFGGEFVHFAPEEQKSLKAFGSPI 366
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKP S L + +++ STF+FPS+++ VGST +F AL + +L + +A+ S
Sbjct: 367 IRIIGFKPRSILPFWASVKKSTFIFPSEEDYVGSTRVFSALWQKLLNDKKIGIAWAITRS 426
Query: 414 N--PRLVALVAQDEIVR--AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 469
N P L A++ E +G P G+ + LP++DD+R E S+ + +S++
Sbjct: 427 NASPILAAVIPSHEKSEDDSGTPYLPAGLWLYPLPFADDLREGPEPPSN---LVISSNEL 483
Query: 470 VKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA 527
+ +++++ L F+ ++ NPSLQ HY +LQ LALEE+ + +D T P + ++
Sbjct: 484 TDRMRVIVQQLQLPKAMFNPKKYPNPSLQWHYKILQVLALEEEYPEKAEDLTEPKYKAIS 543
Query: 528 -RPG--------VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDW 578
R G V++A + L+ D +GD A R KAA + A ++
Sbjct: 544 KRAGGYLDDWAEVLQAETKTALAKAAIKRDADGDNDERPAKR-VKAAPKPAKVSGSSMTT 602
Query: 579 ADL---ADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
A L D G +M V +LK L A STTG+K L+ RI
Sbjct: 603 AQLKASVDHGSFSKMLVADLKDILAARGQSTTGKKTELVERI 644
>gi|328766400|gb|EGF76454.1| hypothetical protein BATDEDRAFT_36232 [Batrachochytrium
dendrobatidis JAM81]
Length = 576
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 266/584 (45%), Gaps = 42/584 (7%)
Query: 57 FHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTAR 116
F+ A+S IA L+T++ D + + F+ T +N +++V + LD P
Sbjct: 13 FNTALSSIAAYLQTKVFESNSDTIGLVFYGTNTTQNAMHAKSIYV-----KYDLDLPDIN 67
Query: 117 FIKEFDHIEES---FEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLF 173
I E H+ + FE +IGS + + + WVA + K + + A KRI +
Sbjct: 68 RILELKHMAKDSSVFESQIGS------ATDPYNYSDVYWVALSIFSKSAPRLARKRIFVI 121
Query: 174 TNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG- 232
TN+D P + A TR+ R + + + IS+EL + D +F + + + I
Sbjct: 122 TNQDLPTST--DALSLAATRS---RISELESMYISVELFAIDKSDTDFFALNLFYNQIPE 176
Query: 233 -LEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTV 291
GDD+ L + ++ +++ + F + IV R+ F + G I + L++
Sbjct: 177 FWLGDDVDLTTIPSSDNFSELCNRILLKKFKQSIVFRVPFTLPGGFRIGVKGTYLVKAKN 236
Query: 292 PGAITWLDSVTNHPLKTERSFICADTGALM-QEPAKRFQPYKGENIKFSVQELSEIKRVS 350
++ L+ T + + C TG LM + K ++ E + F+ +E IK
Sbjct: 237 GQSVKHLEHSTMKQVDFQSILTCMTTGQLMIPDDLKLCYSFETEKVVFTNEEKCNIKSFG 296
Query: 351 TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYG 410
L L GF +S LK HNL+ S F+ P +K+ GS+ +F L + M N+ A+
Sbjct: 297 EPQLVLVGFMDVSDLKAKHNLQASVFITPDEKQYSGSSSLFSHLLKQMSNRNKLAICKLI 356
Query: 411 NPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDD 468
N PR++AL+ Q + V G+ G H IYLP+ DD+R + PR
Sbjct: 357 ARVNSVPRMIALLPQIQGVGFFGKELLSGFHGIYLPFGDDLRVRK-------YAPRFVPP 409
Query: 469 EVKKAAA-LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA 527
E+ AA+ L+ F NP + RH A ++ALAL +D E D T+PDE+ +
Sbjct: 410 ELVDAASELLNHASNATIDFSLFNNPVIDRHNAYVEALALGQDCPRETLDATMPDEQEIH 469
Query: 528 RP-----GVVKAVEEFKLSVYGDNYDEEG-DV---KVSEASRKRKAATENAAKECANYDW 578
K+V + S DN G D+ V+ K+ ++ A+K +
Sbjct: 470 DTYGDFIQNFKSVCQVYNSQCNDNEPTTGIDIAKRTVTSTGSKQAKRSKLASKPMDVQNV 529
Query: 579 ADLADKGKLKEMTVQELKLYLMAHNLS-TTGRKETLISRILTHM 621
LA +GKL ++V +L +L T+ RK LIS+++T++
Sbjct: 530 EILASQGKLSTLSVLQLNQFLTTVKWDITSNRKADLISQVMTYL 573
>gi|312306086|gb|ADQ73897.1| DNA-dependent protein kinase [Alternaria alternata]
Length = 660
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 166/651 (25%), Positives = 298/651 (45%), Gaps = 72/651 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D SP M +ED+ E + A+ C Q ++ +II+ D +
Sbjct: 24 YKTIKDAVLFAIDVSPTMLEKPPKSEDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMG 83
Query: 82 ICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSG 141
I F T +K +L+D + F N LD P+A+ +K + E+ E I+
Sbjct: 84 ILLFGT-EKTDLKDGDNTFQ-NCYLLADLDVPSAQDVKRLRDMVENEE----EAEEILKP 137
Query: 142 SREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
+++ S+ L+ A + + + +R+ L T+ D P +K A D T + RA+
Sbjct: 138 TKDGASMATVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VKVKADKD---TAVTRAR 191
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPSAGQK--------- 248
D DLG +I+L P+S PD F S FY D++ D + +PS Q
Sbjct: 192 DLYDLGCTIDLFPISQPDHTFDRSRFYGDLVYPTSPSDPDAPIAIPSTTQVAKSGEGISL 251
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPT--VPGAITWLDSVTNHPL 306
L+ + + + +R + + + L I + Y LI+ V W+
Sbjct: 252 LKQLISSINSKAAPRRALFSLPMELGPDLRIGVKGYILIKRQEHVKSCYVWVGGEKPQIA 311
Query: 307 KTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRV-STGHLRLHGFKPLSY 364
+ + + D+ A+ + ++ + G+ I F+ +E+++I++ +R+ GFKP+S
Sbjct: 312 VSTTTQMANDSARAIEKTELRKAYKFGGDAITFTPEEITQIRQCFGEPVIRIIGFKPISS 371
Query: 365 LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVA 422
+ + N STF++PS+ + +GST +F AL +L+ + + ++ N P L AL+
Sbjct: 372 VPIWANTNKSTFIYPSEADYIGSTRVFSALQHKLLKSQKMGLVWFIPRRNAAPTLAALIP 431
Query: 423 QDEIVRAGG-QVEPPGMHMIYLPYSDDIR----PVEELHSDTDAVPRASDDEVKKAAALM 477
+E V G Q+ PPG+ ++ LP++DDIR P E TDA+ D ++ ++
Sbjct: 432 GEEKVNEEGEQLMPPGLWLVPLPFADDIRQFPTPPERPLKTTDAL----TDNMR---LII 484
Query: 478 KRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD------------- 522
+++ L + ++ NP LQ Y +LQALALEE+ + +D+T+P
Sbjct: 485 EQLQLPKGIYDPSRYPNPDLQWFYRILQALALEEELPVQPEDKTIPRYKQIDKRCGEYIE 544
Query: 523 ------EEGMARPGVVKAVEEFKLSVY---GDNYDEEGDVKVSEASRKRKAATENAAKE- 572
EE A+ K + G D E ++ K E+ +E
Sbjct: 545 DYGKEFEEAYAQQQKSALAHRTKPTAKKRPGGGADGEDKPAAKRVKKEPKVKAEDGGEEE 604
Query: 573 --CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ ADL + GK+ + TV LK +L A ST G+K L+ + ++
Sbjct: 605 DGMTDQQMADLNNSGKISKQTVAVLKQWLSARGQSTGGKKAELLETVQEYL 655
>gi|242817832|ref|XP_002487024.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713489|gb|EED12913.1| DSB repair complex subunit Ku70, putative [Talaromyces stipitatus
ATCC 10500]
Length = 661
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 163/650 (25%), Positives = 299/650 (46%), Gaps = 80/650 (12%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETH--FHIAVSCIAQSLKTQIINRLYDE 79
Q +++ K+ +++ +D S M P+E + A+ C ++ +II+ D
Sbjct: 30 QGYKSVKDAILFAIDISDSMLMDR-PSESNKGQPQSPAKAAIKCAYHLMQQRIISNPKDM 88
Query: 80 VAICFFNTRKKKNL-QDLNAV--------FVFNVAEREQLDRPTARFIKEFDHIEESFEK 130
+ + F+ T + +D N+ ++F L+ P A +K + E ++
Sbjct: 89 MGVLFYGTEASRFYDEDENSCGGLSYPHCYLFT-----DLEVPDANDVKSLRALAEDDDE 143
Query: 131 EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
++ +VS S+ N L+ A + +S +R+ + T+ D+P A
Sbjct: 144 ---AEQILVSSKERVSMANVLFCANQIFTSKASNFLSRRLFIITDSDNPH-----ADDRT 195
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQK 248
M RAKD DLG+ IEL P+S PD EF S FY D+I GD A +AG +
Sbjct: 196 MRSAATVRAKDLYDLGVIIELFPISRPDHEFDRSKFYDDIIYKTAPGDPEASAFTAAGTQ 255
Query: 249 LEDMKD-----------QLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPG--AI 295
+ + + R +R + +I + I + Y + + P
Sbjct: 256 VPNASGDGISLLNSLLSSVNSRSVPRRALFKIPLEFSPDFKISVTGYLIFKRQEPSRSCY 315
Query: 296 TWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTGH 353
WL K + + DT +++ R + YK GE I F+ +E ++++
Sbjct: 316 VWLGGEKPELAKGTTTHVADDTARTVEKGEIR-KAYKFGGEQISFTAEEQAKLRNFGDPV 374
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKP S L + +++ TF++PS+ E VGST +F ALH+ +L+ + + ++
Sbjct: 375 IRIIGFKPRSSLPIWASIKHPTFIYPSEDEFVGSTRVFSALHQKLLKDEKIGIVWFIARK 434
Query: 414 N--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEV 470
N P L A++A +E + G Q PPG+ ++ LP++DDIR + ++ P D +
Sbjct: 435 NATPVLAAMLAGEEKLDDNGVQFLPPGLWILPLPFADDIR--QNPETNLVVAPEPLIDHM 492
Query: 471 KKAAALMKRIDL--KDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
+ +++++ L + ++ NP+LQ HY +LQALAL+E+ + +D+T+P + + +
Sbjct: 493 R---TIVQQLQLPKAQYDPRKYPNPALQWHYRILQALALDEELPEQAEDKTIPRYKQIDK 549
Query: 529 PGVVKAVEEFKLSVYGDNYDEE------GDVKVSEASRKRKAATENAAKEC--------A 574
+E +G+ +++ G K S +++ K E AA+E +
Sbjct: 550 RAGDYVLE------WGEELEKQHQKMYTGQPKTSTLAKRGKPEHEPAAEEKPVKKVKTES 603
Query: 575 NYDWADLADK-------GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + AD+ G L ++TV LK YL +S G+K LI R+
Sbjct: 604 ASNGRNAADEVQSHYNSGSLSKLTVAVLKEYLTKKKMSVMGKKADLIERV 653
>gi|389633665|ref|XP_003714485.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
gi|351646818|gb|EHA54678.1| hypothetical protein MGG_01512 [Magnaporthe oryzae 70-15]
Length = 644
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 163/648 (25%), Positives = 306/648 (47%), Gaps = 63/648 (9%)
Query: 11 DDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTT--CPAEDQTDETHFHIAVSCIAQS 67
+DD E+D E + +++ K+ +++ +D S M ++ +++ A+ C Q
Sbjct: 11 EDDVEADEEMDESDYKTQKDAIIFAIDVSKSMLEEPEHSSSKKADNDSPLTAALKCANQI 70
Query: 68 LKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVF-NVAEREQLDRPTARFIKEFDHIEE 126
++ +II D + I FNT + K L+D+ + + + LD P A +K + E
Sbjct: 71 MQQRIIASPKDMMGILLFNTERTK-LRDVTSGGSYPHCYLYLDLDIPEAEDVKMLRSLVE 129
Query: 127 SFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGA 186
E G+ +V ++ N L+ A + +R+ + T+ DDP K A
Sbjct: 130 EGEDLEGA---LVPSEEPATMANVLFCANQTFTTKAPNFGSRRLFIITDNDDPHSGDKAA 186
Query: 187 AKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----GLEGDDLALFM 242
+ RAKD DLG+ IEL P+S D++F ++ FY D+I E D++
Sbjct: 187 -----RASAAVRAKDLYDLGVIIELFPISKGDQKFDLAKFYDDIIYRDPTTEADEIK--H 239
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAITW 297
+G L ++ L + SK+ KR + F +A GL+I + Y + P TW
Sbjct: 240 AKSGDGL-NLLSSLISNINSKQTPKRAYFSHLPFEVAPGLTISVKGYIPLHVQKPARTTW 298
Query: 298 LDSVTNHP----LKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGH 353
+ + +T + + + + + K+ + G+ I + +E +++K
Sbjct: 299 VHTAGEKAELALPETTKMEVSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHV 358
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN-- 411
LR+ GFKP S + + +++ ST++FP++++ VGST +F AL + +L+ ++ +A++
Sbjct: 359 LRIIGFKPRSMIPQWASIKKSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARV 418
Query: 412 PSNPRLVALV----AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD 467
+NP LVA++ DE +G + P G+ + LP++DD+R +D V +A +
Sbjct: 419 NANPVLVAIIPSKRPSDE--ESGTKFLPAGLWLCTLPFADDLR-----ETDKRDVIKAPE 471
Query: 468 DEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEG 525
+ K ++ + L + ++ NP+LQ HY +LQALAL+E+ + D T+P +
Sbjct: 472 ELTAKMRKVVGNLHLPKGTYDPARYPNPALQWHYKILQALALDEEVPEQGDDPTLPKFKA 531
Query: 526 MAR--PGVVKAVEE--------------FKLSVYGDNYDEEGDVKVSEASRKRKAATENA 569
+A+ G + + E K D+ DE+ K ++ SR A + A
Sbjct: 532 IAKRVGGAIAEINEDLEDAARVAQGQRALKREHEADDEDEK---KPAKKSRIEVATSAKA 588
Query: 570 AKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
++ + KL +MTV +LK L + +S G+K L+ ++
Sbjct: 589 GATTSDSQLRAAHQQDKLVKMTVADLKAILTSKGISPVGKKAELVEKL 636
>gi|285028687|gb|ADC34633.1| DSB repair complex subunit Ku70 [Penicillium decumbens]
Length = 620
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 273/601 (45%), Gaps = 60/601 (9%)
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDR 112
A+ C ++ +II+ D + + + T K DL+ + + LD
Sbjct: 22 ALKCAYHLMQQRIISNPSDMIGVLLYGTESSKFHDEDGTAASDLSYPHCYLFTD---LDI 78
Query: 113 PTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILL 172
P+A +K + E E GS+ + S S+ N L+ A + + +R+ +
Sbjct: 79 PSAEEVKSLRALAEDEE---GSRSILKPSSESVSMANVLFCANQIFTSKAPNFLSRRLFI 135
Query: 173 FTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI- 231
T++D+P K + RA+D DLG++IEL P+S PD +F S FY D+I
Sbjct: 136 VTDDDNPHQD-----KKSLRSAATVRARDLYDLGVNIELFPISGPDHDFDTSKFYDDIIY 190
Query: 232 ---GLEGDDLALFMP----SAGQKLEDMKDQLRKRMFSKRIVKRISFI------IANGLS 278
+G+ P S G+ R V R S I
Sbjct: 191 KASPRDGEAPTYLRPDIHASTGKGDGISLLNSLLSSIHSRAVPRRSLFSNVPLEIGPNFK 250
Query: 279 IELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GE 334
I +N Y L++ P WL +K +++ DT +++ R + YK GE
Sbjct: 251 ISVNGYLLLKKQEPARSCYVWLGGEKPQIVKGITTYMADDTAQTVEKAEIR-KAYKFGGE 309
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+ F+ +EL ++ +R+ GFKPLS L + N++ +F++P + + VGST +F AL
Sbjct: 310 QVTFTPEELQGLRNFGEPVIRIIGFKPLSTLPIWANVKHPSFIYPCEDDFVGSTRVFSAL 369
Query: 395 HRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRP 451
H+ +L+ + A+ ++ N P + A++A +E + Q PPGM +I LP++DD+R
Sbjct: 370 HQKLLKDGKMALVWFIPRKNSAPVVAAMIAGEEKLDENNVQKVPPGMWLIPLPFADDVR- 428
Query: 452 VEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDD 511
+ S P D +++ ++ + + ++ NP+LQ HY +LQALAL+ED
Sbjct: 429 -QNPPSVLSVSPDHLTDAMRQVIGQLQ-LPKGTYDPQKYPNPALQWHYRILQALALDEDH 486
Query: 512 MPEIKDETVPDEEGMARPGVVKAVEEFKL--SVYGDNYDEEGDVKVSEASRKRKAAT--- 566
E +D+T P + + +E +L + Y Y G + ++R ++ A
Sbjct: 487 PGEAEDKTKPKYRQIDKRAGDYVLEWSRLLDAAYDKMYG--GPAATTTSTRVKRDAPGVG 544
Query: 567 ENAAK----------ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISR 616
E+A + E + A L + G L ++T LK +L AH L+ G+K+ L+ +
Sbjct: 545 ESAGQPLVKRIKAETEDPDEKIARLYEAGGLSKVTRAVLKDFLDAHGLAAAGKKDDLVEQ 604
Query: 617 I 617
+
Sbjct: 605 V 605
>gi|225562114|gb|EEH10394.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 655
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 178/671 (26%), Positives = 306/671 (45%), Gaps = 92/671 (13%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD----ETHFHIAV 61
DD F +++E+ D Y+ + K+ V++ ++ S M T P E + E+ A+
Sbjct: 11 DDAF-EEEEDIDETGYK---SVKDAVLFAIEISESML--TPPPETGSKRADKESPATAAL 64
Query: 62 SCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDR 112
C ++ +II+ D + I + T + K + + ++F+ LD
Sbjct: 65 KCAYHLMQQRIISNPKDMIGILLYGTEESKFYDEDESGRGSLSYPHCYLFS-----DLDV 119
Query: 113 PTARFIKEFD---HIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADK 168
P A +K+ H EE E+ I+ S+E S+ N L+ A + + + +
Sbjct: 120 PAAEDVKKLRALVHQEEEAEQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSR 172
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
R+ + T+ DDP K + RAKD DLG+ IEL P+S P++EF S F+
Sbjct: 173 RLFIVTDNDDPHSKDKA-----LRSAATVRAKDLYDLGVIIELFPISQPNKEFDRSKFFD 227
Query: 229 DMI--GLEGDDLALFMPSAGQKLE-----------------DMKDQLRKRMFSKRIVKRI 269
D+I D A P+A K + K R+ +FS +
Sbjct: 228 DIIYKASPTDPEAPAFPTAQTKTSTSGGDGISLLKSLLSSINSKSVPRRALFS-----NV 282
Query: 270 SFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAK 326
I I + Y + + P WL K + + D+ +++ K
Sbjct: 283 PLEIGPDFKISVTGYLIFKRQEPARSCYVWLGGEVPQIAKGITTQMADDSAREVEKWEIK 342
Query: 327 RFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG 386
+ + GE I F+ +E + ++ +R+ GFKPLS L + +++ TF++P+++ VG
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 387 STCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYL 443
ST +F AL++++L+ + A+ ++ N P + A++ + ++ G +V P GM ++ L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 444 PYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAV 501
P++DDIR E + T A D V K +++ + L + ++ NPSLQ HY +
Sbjct: 463 PFADDIRQNPETNLIT-----APDSLVDKMRTVIQLLQLPKAQYDPQKYPNPSLQWHYRI 517
Query: 502 LQALALEEDDMPEIKDETVPDEEGM-ARPG--VVKAVEEFK---LSVYGDNYDEEGDVK- 554
LQALAL+ED + +D+TVP + R G V+ EE + L + VK
Sbjct: 518 LQALALDEDLPEQPEDKTVPKYRQIDKRAGEFVIAWGEELESQHLMIEAKQPATSTLVKR 577
Query: 555 -VSEASRKRKAATENAAKECANYDWADLAD-------KGKLKEMTVQELKLYLMAHNLST 606
S A + K + K + D A + D KG L ++T LK +L + +LST
Sbjct: 578 PASRAQDQVKGDSRPTKKTKTSPDAAGVGDEVKLHYEKGTLNKLTAAVLKEFLQSQHLST 637
Query: 607 TGRKETLISRI 617
TG+K LI R+
Sbjct: 638 TGKKADLIERV 648
>gi|312067421|ref|XP_003136735.1| hypothetical protein LOAG_01147 [Loa loa]
gi|307768106|gb|EFO27340.1| hypothetical protein LOAG_01147 [Loa loa]
Length = 614
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 281/590 (47%), Gaps = 51/590 (8%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAIC-FFN 86
K+ ++LVDASPKMF +D ++ F A+ I + + + + E C N
Sbjct: 25 KKCTIFLVDASPKMFEKY-ENDDSDNDCAFRRALKIIRLQMVNKAVTSTFGEYTCCILLN 83
Query: 87 TRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENS 146
T+ K + ++ V+V ++++ +A IKE D + S + I S + + G
Sbjct: 84 TQIKSH--SIDHVYVM-----QEVEEVSAERIKELDQLLRS--ENILSAFKTIYGGHGRC 134
Query: 147 LYN-ALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
Y+ AL++ + + + + LFTNE + FG A N +T + A D +
Sbjct: 135 DYSEALFLCVKRITSRTPYFRKRTVCLFTNETNLFG-----ADNQHRISTCKNADDLRGH 189
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKD---QLRKRMFS 262
+ PL D F + LE D P G+ E++ + + +++++
Sbjct: 190 NTEFSVYPLIAEDHTFGFN-------VLEQLD-----PDVGKNYENISELEKDIPRKLYT 237
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADT----G 318
R + + F + L + Y+L+ L++ TN ++ ++ +T
Sbjct: 238 HRNIAGMDFEFGDRLKFSVGIYSLLCSEKIPQPAALNAETNEIMQRSHIYVNKETDEEVS 297
Query: 319 ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVF 378
L +E ++ Q GE + S E+ +++R++ + L GFKPLS LK H++R S FV+
Sbjct: 298 VLNKEIIQKRQ-IGGETVNLSADEIEKLRRLTPPGILLLGFKPLSCLKITHHVRSSQFVY 356
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVE-- 434
P +K+++GS ++ L+ ++ + + Y +N P+LVALV Q + + E
Sbjct: 357 PLEKDILGSVRMYRTLYDVCMKQRKMIICRYTQKANVPPKLVALVPQASVAEDNSKGEFS 416
Query: 435 ----PPGMHMIYLPYSDDIRPVEE--LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVC 488
PG H++YLP+++D R + E +H D D P AS ++++ A L+K++ F
Sbjct: 417 SKSCYPGFHLVYLPFAEDKRDLREQMIHPDGDW-PAASKEQIEVAKKLVKKLTASYFPE- 474
Query: 489 QFANPSLQRHYAVLQALALEEDDMPEIKDETVPD-EEGMARPGVVKAVEEFKLSVYGDNY 547
+F NP LQ+HY +++ALAL+ D++PE++D+ P R V K + EF+ + D+
Sbjct: 475 KFYNPVLQKHYKLIEALALDYDEVPEVQDQIQPYFVYDNFRKRVEKELNEFRSCLLPDSC 534
Query: 548 DEEGDVKVSEASRKRKAATEN-AAKECANYDWADLADKGKLKEMTVQELK 596
+ + ++T N K+ N LA L++MTV +LK
Sbjct: 535 NSRQTYCKEAKKTDQISSTWNIKTKKSTNESLLYLATNHLLEKMTVTQLK 584
>gi|261189322|ref|XP_002621072.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
gi|239591649|gb|EEQ74230.1| DSB repair complex subunit Ku70 [Ajellomyces dermatitidis SLH14081]
Length = 655
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 168/653 (25%), Positives = 295/653 (45%), Gaps = 88/653 (13%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTD----ETHFHIAVSCIAQSLKTQIINRLYDE 79
+++ K+ V++ ++ S M T P + + E+ A+ C ++ +II+ D
Sbjct: 25 YKSVKDAVLFAIEISESML--TPPPDTGSKRADKESPATAALKCAYHLMQQRIISNPKDM 82
Query: 80 VAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDRPTARFIKEFD---HIEES 127
+ I + T + K D + ++F LD P A +K+ H EE
Sbjct: 83 IGILLYGTEESKFYDDDESGRGNLSYPHCYLFT-----DLDVPAADDVKKLRALVHDEEE 137
Query: 128 FEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGA 186
E+ I+ S+E S+ N L+ A + + + +R+ + T+ DDP KG
Sbjct: 138 AEQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSRRLFIVTDNDDPHSKDKG- 189
Query: 187 AKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPS 244
+ RAKD DLG++IEL P+S P++EF S F+ D++ D A P+
Sbjct: 190 ----LRFAATVRAKDLYDLGVTIELFPISRPNQEFDRSKFFDDIVYKSSPTDPEAPAFPT 245
Query: 245 AGQKLE-----------------DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
K + K R+ +FS + I I + Y +
Sbjct: 246 GQTKTSTSGGDGISLLKSLLSSINSKSVPRRALFSN-----VPLEIGPEFKISVTGYLIF 300
Query: 288 RPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELS 344
+ P WL K + + D+ +++ ++ + GE I F+ +E +
Sbjct: 301 KRQEPARSCYVWLGGEEPQIAKGITTQMADDSAREVEKWEIRKAYKFGGEQISFTQEEQA 360
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
++ +R+ GFKPLS L + +++ TF++PS++ VGST +F AL++++L+ +
Sbjct: 361 ALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVGSTRVFSALYQTLLKKEKL 420
Query: 405 AVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
A+ ++ N P + A++ ++ G ++ P GM ++ LP++DDIR E + T
Sbjct: 421 ALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEIIPQGMWILPLPFADDIRQNPETNLIT-- 478
Query: 462 VPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
A D+ V K +++ + L + ++ NPSLQ HY +LQALAL+ED + +D+T
Sbjct: 479 ---APDELVDKMRTVIQLLQLPKAQYDPQKYPNPSLQWHYRILQALALDEDLPEQPEDKT 535
Query: 520 VPDEEGM-ARPG--VVKAVEEFK------------LSVYGDNYDEEGDVKVSEASRKRKA 564
+P + R G V+ EE + S +V+ SR K
Sbjct: 536 IPKYRQIDKRAGEHVIAWGEELEAQHLILEAKQPATSTLVKRPASRAQEQVNGGSRPIKK 595
Query: 565 ATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ A+ + L +KG L +TV LK YL + NLSTTG+K L+ R+
Sbjct: 596 VKTTSDATGADEEVRVLYEKGALNRLTVAVLKDYLQSQNLSTTGKKADLVERV 648
>gi|453085294|gb|EMF13337.1| DSB repair complex subunit Ku70 [Mycosphaerella populorum SO2202]
Length = 675
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 177/666 (26%), Positives = 307/666 (46%), Gaps = 95/666 (14%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA-----VSCIAQSLKTQIINRLYD 78
++ K+ V++ +DAS M T PAE + +A + C ++ +II+ +D
Sbjct: 31 YKTVKDAVLFAIDASQSML--TKPAERDPKKPEHSLAPTAAALKCAYALMQQRIISNPHD 88
Query: 79 EVAICFFNTRKKKNLQDLNAVFVFNVAE---REQLDRPTARFIKEFDH-IEESFEKEIGS 134
+ I FNT K K + ++ F + L+ P A +K+ +E+ + E
Sbjct: 89 MMGILLFNTEKSKFDEGDDSSRGFQYPHCYLLQDLNVPAAEDVKQLRTLVEDDEDDEEEK 148
Query: 135 QYGIVSGSR-ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
I+ S+ E S+ N L+ A + + + +R+ L T+ D P S + D
Sbjct: 149 ATRILQASKDEVSMANVLFCANQIFTTKAPNFSSRRLFLVTDNDYPHSSDR-----DARN 203
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDE--EFKVSHFYADMI------------GLEGDDLA 239
+ RAKD DLG++IEL P+S PD F S FY D++ L D A
Sbjct: 204 SAAVRAKDLYDLGVTIELFPISHPDRGYTFDRSKFYNDIVYSSTPSDPDAPAPLTSDIKA 263
Query: 240 LFMPSAGQK-----LEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG 293
S+ K L+ + ++ R +R + + I GL I + Y L++ P
Sbjct: 264 A---SSTAKDGISLLQALLSSVQSRNAPRRALFSSVPLEIGRGLKIGVKGYTLLKRQEPA 320
Query: 294 AITWLDSVTNHPLKTERSFICADTGALMQEPA---------KRFQPYKGENIKFSVQELS 344
T++ P E++ I L+ E +R + GE + FS+++++
Sbjct: 321 RQTYI----YLPSDGEKAQIAEGHSELVDEDTARTVEKTEIRRAYKFGGETVSFSLEDMA 376
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
+I +R+ GFKPLS L + + STF++PS++ +GST +F ALH+ +LR +
Sbjct: 377 KINDWGEPTIRIIGFKPLSMLPVWATVDKSTFIYPSEESFIGSTRVFSALHQKLLRDQKI 436
Query: 405 AVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
A+A+Y N PRL AL+ ++E G Q PPG+ + LP++DDIR + D +
Sbjct: 437 ALAWYIPRRNASPRLAALIPGEEERNEEGEQHMPPGIWIKPLPFADDIR----ANPDVNL 492
Query: 462 VPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
V +A D+ V +++++ L + ++ NP+LQ + +LQALAL+ED +D+T
Sbjct: 493 V-KAPDEVVDAMRLIVQQLQLPKAVYDPLKYPNPALQWFFRILQALALDEDLPEHPEDKT 551
Query: 520 VPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC------ 573
+P + + R VE +G+ D + ++E + K AT A+K
Sbjct: 552 LPRWKQIHRRAGWYIVE------WGEKLDAAFNQWLAENAASIKPATNGASKRVGPASSA 605
Query: 574 ------------------ANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLIS 615
A+ A +AD L + V +LK++L +S TG+K+ L+
Sbjct: 606 SVKKAKKEEDEDEEGINDADMKAAYMAD--TLSKYKVNDLKVWLKNKGMSATGKKQDLVD 663
Query: 616 RILTHM 621
+ ++
Sbjct: 664 AVTSYF 669
>gi|449303204|gb|EMC99212.1| hypothetical protein BAUCODRAFT_395450 [Baudoinia compniacensis
UAMH 10762]
Length = 674
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 254/541 (46%), Gaps = 65/541 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFH---IAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ +D S M + + +T A+ C ++ +II+ D +
Sbjct: 27 YKTVKDAVLFAIDVSESMLRKPAEGDPKKPDTTLSPTLAALKCAYALMQQRIISNPNDMM 86
Query: 81 AICFFNTRKKKNLQD--------LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEI 132
I F T K K QD L + + + LD P A +K+ + E E
Sbjct: 87 GILLFGTEKSK-FQDGDESGRGGLQYPHCYLLTD---LDVPAAADVKQLRSL---VEDEA 139
Query: 133 GSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
S +V+ E S+ N L+ A + + + +R+ L T+ D P A+ D
Sbjct: 140 ESSDLLVASKEEVSMANVLFCANQIFTTKAPNFSSRRLFLVTDNDYPH-----ASNRDAR 194
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDE--EFKVSHFYADMI--GLEGDD-----LALFMP 243
+ RAKD DLG++IEL P+S P+ F S FY D++ + D L +
Sbjct: 195 NSAAVRAKDLYDLGVTIELFPISHPNRGYTFDRSKFYNDIVYSSMPSDPDAPAPLTADIK 254
Query: 244 SAGQKLED-------------MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPT 290
+A +D + +R+ FS + F I G I + Y L+R
Sbjct: 255 AASSTAKDGISLLQSLLSSVQSRSAMRRAQFSN-----MPFEIGPGFKISVKGYILVRRQ 309
Query: 291 VP--GAITWLDSVTNHP-LKTERSFICADTGALMQEPA--KRFQPYKGENIKFSVQELSE 345
P A +L T+ P + + + AD A E A +R + GE I FS +EL++
Sbjct: 310 EPKRTAYIYLPPDTDKPQIVSSHGTLVADDTARTVEKAEVRRAFKFGGETISFSEEELAK 369
Query: 346 IKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFA 405
IK LR+ GFKPL L + +++ + F++PS+++ VGST +F ALH+ +L+ R
Sbjct: 370 IKHFGDPVLRIIGFKPLDMLPIWAHVKQNYFIYPSEEDYVGSTRVFSALHQKLLKDQRIG 429
Query: 406 VAFY--GNPSNPRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAV 462
+A++ S P LVAL+ ++ G Q PPG+ + +LP++DDIR + V
Sbjct: 430 IAWFIPRRNSTPALVALIPGREHRSEEGEQTLPPGIWIKHLPFADDIREPPQTE-----V 484
Query: 463 PRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
+A D + +++++ L + ++ NP+LQ Y +LQALALEED + +D+T+
Sbjct: 485 VKAPDPLIDAMRVVIQQLQLPKAIYDPRKYPNPALQWFYRILQALALEEDLPEQAEDKTL 544
Query: 521 P 521
P
Sbjct: 545 P 545
>gi|322712496|gb|EFZ04069.1| ku70 protein [Metarhizium anisopliae ARSEF 23]
Length = 646
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 162/649 (24%), Positives = 302/649 (46%), Gaps = 55/649 (8%)
Query: 7 DVFRDDDEESDNEFYQE-HEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIAVSC 63
D R+D+++ D E + ++A K+ ++ ++ S M P++ + ++ A+ C
Sbjct: 7 DWKREDEDDGDQEIDETTYKAQKDAIIMAIEVSDSMLKPPPPSDSKKADQDSALEAALKC 66
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNLQD---LNAVFVFNVAEREQLDRPTARFIKE 120
++ +II+ D + I F T+K K D N + N LD P A +K
Sbjct: 67 AYHLMEQRIISNPKDMMGILLFGTKKTKFYNDEDGRNGLGYPNCYLFTDLDIPAADDVKV 126
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
++ E E + + S + N L+ A + ++ +R+ + T+ D+P
Sbjct: 127 LKNLVEDGEDD---DEVLTPSSDRAIMSNVLFCANQIFTTKAANFGSRRLFIITDNDNPH 183
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG----LEGD 236
S K A RAKD DLG++I+L P++ D +F +S FY D++ E +
Sbjct: 184 PSDKAAMS-----AAAVRAKDLYDLGVTIDLFPITRGDSKFDLSKFYDDIVYRDPIAEAN 238
Query: 237 DLALFMPSAGQKLE---------DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
A+ + +G L + K ++ MFS + F IA GL I + Y ++
Sbjct: 239 STAVAISKSGDGLSLLSSLTSNINSKQTPKRAMFS-----NLPFEIAPGLRISVKGYNVL 293
Query: 288 RPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELS 344
P WLD E + + D+ +++ K+ + GE + F+ E
Sbjct: 294 HRQTPARTCYIWLDGEKPQIAAGETTRLAEDSIRTVEKGEMKKAYKFGGEYVCFTPDEQK 353
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
++ +R+ GFKP L + +++ STF+FPS+++ VGST +F AL + +++ N+
Sbjct: 354 SLRDFGPPVIRIIGFKPRKLLPMWASVKKSTFIFPSEEDFVGSTRVFTALWQKLIKDNKI 413
Query: 405 AVAFYGNPSN--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD 460
+A+ SN P L A+V E ++G P G+ + LP++DD+R ++ D
Sbjct: 414 GIAWCIVRSNAQPILAAIVPSREPSDEKSGTPYLPAGLWIYPLPFADDLREIKP----PD 469
Query: 461 AVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE 518
V ++SD+ + +++++ L ++ ++ NP+LQ HY +L+ALALEE+ +D
Sbjct: 470 GVTQSSDELKTQMRTIVQQLQLPKAMYNPLKYPNPALQWHYKILKALALEEEVPETAEDA 529
Query: 519 TVPDEEGMA-RPGVV------KAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAK 571
T P + ++ R G K E+ + + E D + S+ K++ +
Sbjct: 530 TKPKYKAISKRAGGYLEEWSEKLEEDAGTARTSKSLKREADDEASDRPVKQRRGASSGQL 589
Query: 572 ECANYDWADLAD---KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
++ A+L + G + +MT+ +L+ + LST G+K L RI
Sbjct: 590 NPSSMSVAELKEAITSGAIMKMTLSQLRDVAGSKGLSTAGKKAELAERI 638
>gi|239609039|gb|EEQ86026.1| protein Ku70 [Ajellomyces dermatitidis ER-3]
gi|327354321|gb|EGE83178.1| Ku70 [Ajellomyces dermatitidis ATCC 18188]
Length = 655
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 167/653 (25%), Positives = 295/653 (45%), Gaps = 88/653 (13%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTD----ETHFHIAVSCIAQSLKTQIINRLYDE 79
+++ K+ V++ ++ S M T P + + E+ A+ C ++ +II+ D
Sbjct: 25 YKSVKDAVLFAIEISESML--TPPPDTGSKRADKESPATAALKCAYHLMQQRIISNPKDM 82
Query: 80 VAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDRPTARFIKEFD---HIEES 127
+ I + T + K D + ++F LD P A +K+ H EE
Sbjct: 83 IGILLYGTEESKFYDDDESGRGNLSYPHCYLFT-----DLDVPAADDVKKLRALVHDEEE 137
Query: 128 FEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGA 186
E+ I+ S+E S+ N L+ A + + + +R+ + T+ DDP KG
Sbjct: 138 AEQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSRRLFIVTDNDDPHSKDKG- 189
Query: 187 AKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPS 244
+ RAKD DLG++IEL P+S P++EF S F+ D++ D A P+
Sbjct: 190 ----LRSAATVRAKDLYDLGVTIELFPISRPNQEFDRSKFFDDIVYKSSPTDPEAPAFPT 245
Query: 245 AGQKLE-----------------DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
K + K R+ +FS + I I + Y +
Sbjct: 246 GQTKTSTSGGDGISLLKSLLSSINSKSVPRRALFSN-----VPLEIGPEFKISVTGYLIF 300
Query: 288 RPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELS 344
+ P WL K + + D+ +++ ++ + GE I F+ +E +
Sbjct: 301 KRQEPARSCYVWLGGEEPQIAKGITTQMADDSAREVEKWEIRKAYKFGGEQISFTQEEQA 360
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
++ +R+ GFKPLS L + +++ TF++PS++ VGST +F AL++++L+ +
Sbjct: 361 ALRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPSEEGYVGSTRVFSALYQTLLKKEKL 420
Query: 405 AVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDA 461
A+ ++ N P + A++ ++ G ++ P GM ++ LP++DDIR E + T
Sbjct: 421 ALVWFVPRKNAAPVMAAMIPGTAKLDEDGEEIIPQGMWILPLPFADDIRQNPETNLIT-- 478
Query: 462 VPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
A D+ V K +++ + L + ++ NPSLQ HY +LQALAL+ED + +D+T
Sbjct: 479 ---APDELVDKMRTVIQLLQLPKAQYDPQKYPNPSLQWHYRILQALALDEDLPEQPEDKT 535
Query: 520 VPDEEGM-ARPG--VVKAVEEFK------------LSVYGDNYDEEGDVKVSEASRKRKA 564
+P + R G V+ EE + S +V+ SR K
Sbjct: 536 IPKYRQIDKRAGEHVIAWGEELEAQHLILEAKQPATSTLVKRPASRAQEQVNGGSRPSKK 595
Query: 565 ATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
++ A+ + +KG L +TV LK YL + NLSTTG+K L+ R+
Sbjct: 596 VKTSSDATGADEEVRLHYEKGVLNRLTVAVLKDYLQSQNLSTTGKKADLVERV 648
>gi|325091560|gb|EGC44870.1| Ku70 protein [Ajellomyces capsulatus H88]
Length = 655
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 172/669 (25%), Positives = 301/669 (44%), Gaps = 88/669 (13%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD----ETHFHIAV 61
DD F +++E+ D Y+ + K+ V++ ++ S M T P + + E+ A+
Sbjct: 11 DDAF-EEEEDIDETGYK---SVKDAVLFAIEISESML--TPPPDTGSKRADKESPATAAL 64
Query: 62 SCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDR 112
C ++ +II+ D + I + T + K + + ++F+ LD
Sbjct: 65 KCAYHLMQQRIISNPKDMIGILLYGTEESKFYDEDESGRGSLSYPHCYLFS-----DLDV 119
Query: 113 PTARFIKEFDHI--EESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRI 170
P A +K+ + +E K+I +V S+ N L+ A + + + +R+
Sbjct: 120 PAAEDVKKLRALVHQEEEAKQI-----LVPSKERVSMSNVLFCANQIFSSKAPNFSSRRL 174
Query: 171 LLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADM 230
+ T+ DDP K + RAKD DLG+ IEL P+S P++EF S F+ D+
Sbjct: 175 FIVTDNDDPHSKDKA-----LRSAATVRAKDLYDLGVMIELFPISQPNKEFDWSKFFDDI 229
Query: 231 I--GLEGDDLALFMPSAGQKLE-----------------DMKDQLRKRMFSKRIVKRISF 271
I D A P+A K + K R+ +FS +
Sbjct: 230 IYKASPTDPEAPAFPTAQTKTSTSGGDGISLLKSLLSSINSKSVPRRALFS-----NVPL 284
Query: 272 IIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRF 328
I I + Y + + P WL K + + D+ +++ K+
Sbjct: 285 EIGPDFKISVTGYLIFKRQEPARSCYIWLGGEVPQIAKGITTQMADDSAREVEKWEIKKA 344
Query: 329 QPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGST 388
+ GE I F+ +E + ++ +R+ GFKPLS L + +++ TF++P+++ VGST
Sbjct: 345 YKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVGST 404
Query: 389 CIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPY 445
+F AL++++L+ + A+ ++ N P + A++ + ++ G +V P GM ++ LP+
Sbjct: 405 RVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPLPF 464
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQ 503
+DDIR E + T A D V K +++ + L + ++ NPSLQ HY +LQ
Sbjct: 465 ADDIRQNPETNLIT-----APDSLVDKMRTVIQLLQLPKAQYDPQKYPNPSLQWHYRILQ 519
Query: 504 ALALEEDDMPEIKDETVP------DEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVK--V 555
ALAL+ED + +D+TVP + G K +E L + VK
Sbjct: 520 ALALDEDLPEQPEDKTVPKYRQIDNRAGEFVIAWGKELESQHLMIEAKQPATSTLVKRPA 579
Query: 556 SEASRKRKAATENAAKECANYDWADLAD-------KGKLKEMTVQELKLYLMAHNLSTTG 608
S A + K + K + D A + D KG L ++T LK +L + +LSTTG
Sbjct: 580 SRAQDQVKGDSRPTKKTKTSPDAAGVGDEVKLHYEKGTLNKLTAAVLKEFLQSQHLSTTG 639
Query: 609 RKETLISRI 617
+K LI R+
Sbjct: 640 KKADLIERV 648
>gi|302507648|ref|XP_003015785.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
gi|291179353|gb|EFE35140.1| hypothetical protein ARB_06096 [Arthroderma benhamiae CBS 112371]
Length = 627
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 255/528 (48%), Gaps = 45/528 (8%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQIINRLYDE 79
++++K+ V++ ++ S M T P + ++ + ++ +S ++ +II+ D
Sbjct: 24 YKSSKDAVLFAIEVSESML--TPPPDSKSKKADKDAPITAALKSAYHIMQQRIISNPQDM 81
Query: 80 VAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
+ + + T+ K + + + + LD P A +K+ + E E +
Sbjct: 82 MGVLLYGTKDSKFYDEDEEGRGTLPYPHCYLYTDLDVPAASDVKDLRALAED---EDSAA 138
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
++ ++ N L+ A + ++ + +R+ + T+ D+P + K +
Sbjct: 139 EILIPSEEPVTMANVLFCANQIFTSKAANFSSRRLFIITDNDNPHQNEKA-----LRSAA 193
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAGQKLED-- 251
RAKD DLG+ IEL P+S P EEF S FYAD+I D A P A K
Sbjct: 194 TVRAKDLYDLGVIIELFPISRPGEEFDRSKFYADIIYKASPTDPEAPAFPQAATKTSTSG 253
Query: 252 -----MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPGAITWLDSV 301
+ + L + SK + +R F I GL I + Y + + P ++
Sbjct: 254 GDGITLLNSLISSINSKSVPRRALFSNVPLEIGPGLKISVTGYLIFKRQEPARSCYIWLA 313
Query: 302 TNHP-LKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRVSTGHLRLHG 358
P + + AD A E + + YK GE + F+ +E +EI+ +R+ G
Sbjct: 314 GEQPQIAKGMTTQLADDSAREVEKWEIRKAYKFGGEQVSFTQEEQAEIRNFGEPTIRILG 373
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPLS L + +++ TF++PS++ VGST F ALH+++L+ + A+ ++ N P
Sbjct: 374 FKPLSSLPIWASMKHPTFLYPSEEGYVGSTRTFSALHQTLLKQKKMALVWFVPRRNAAPV 433
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ A++A +E + G Q PPGM ++ LP++DDIR E + T A D + K
Sbjct: 434 MAAMIAGEEKLDENGEQTIPPGMWILPLPFADDIRQNPETNHIT-----APDSLINKMRP 488
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
+++++ L++ + ++ NPSLQ HY +LQALAL+ED E +D+T P
Sbjct: 489 IIRQLQLQNAQYDPQRYPNPSLQWHYKILQALALDEDLPEEPEDKTKP 536
>gi|46121879|ref|XP_385493.1| hypothetical protein FG05317.1 [Gibberella zeae PH-1]
Length = 1819
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 166/659 (25%), Positives = 299/659 (45%), Gaps = 70/659 (10%)
Query: 4 DPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAE-DQTD-ETHFHIA 60
D D R+D+++ + E + ++A K+ ++ +D S M P++ + D ++ A
Sbjct: 3 DKQDWRREDEDDGEQEVDENSYKAQKDAILLAIDVSKSMLEPPPPSDYKKADRDSPVQAA 62
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA--------VFVFNVAEREQLDR 112
+ C ++ +II+ D + I F T K K + ++ ++F LD
Sbjct: 63 LKCAYHLMEQRIISNPKDMMGILLFGTEKSKFQESGDSRGGLGYPHCYLFT-----DLDV 117
Query: 113 PTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILL 172
P A +K ++ E+ + S+ N L+ A + ++ +R+ +
Sbjct: 118 PAAEDVKA---LKALVEEGEDEDEVLTPSDEPVSMSNVLFCANQIFTTKAANFGSRRLFI 174
Query: 173 FTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI- 231
T+ +P S K A RAKD DLGI I+L P++ D F V FY D+I
Sbjct: 175 VTDNANPHASDKQAKS-----AAAVRAKDLYDLGIMIDLFPITRGDATFDVHKFYDDIIY 229
Query: 232 --------------GLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIANG 276
GD L L L + + + +KR + + F IA G
Sbjct: 230 RDPVGEANMSEVRTSKSGDGLTL--------LSSLISNVNSKQTAKRALFSNLPFEIAPG 281
Query: 277 LSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEP-AKRFQPYKG 333
L I + Y ++ VP WLD E + I D+ ++++ K+ + G
Sbjct: 282 LRISVKGYNIVHRQVPARTCYIWLDGEKAQIASGETTRIAEDSAKVIEKGDIKKAYKFGG 341
Query: 334 ENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
E + F+ E +K + +R+ GFKP S L + + + STF+FPS+++ VGS+ +F A
Sbjct: 342 EYVYFTPDEQKSLKDFGSPVIRIIGFKPRSLLPIWASTKKSTFIFPSEEDYVGSSRVFTA 401
Query: 394 LHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDDI 449
L + +L+ ++ +A+ +N P L A++ E +G P G+ + LP+ DD+
Sbjct: 402 LWQKLLKDDKMGIAWCITRANAQPMLAAIIPSRERSDDDSGTPYLPAGLWIYPLPFQDDL 461
Query: 450 RPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALAL 507
R + V R SD+ + +++++ L ++ ++ NP+LQ HY +LQALAL
Sbjct: 462 RNINP----PSEVLRTSDELTTQMRTIVQQLQLPKAMYNPSKYPNPALQWHYRILQALAL 517
Query: 508 EEDDMPEIKDETVPDEEGMAR--PGVVK------AVEEFKLSVYGDNYDEEGDVKVSEAS 559
+E+ + D T P + +++ G ++ A E K++ E D V +
Sbjct: 518 QEEVPEKADDATEPKYKAISKRAGGYLEDWSECLAQEAGKVANSKATKRETDDEDVERPA 577
Query: 560 RKRKAATENAAKECANYDWADLA-DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+K + A+E A+ + + A + G + +MTV +L+ L +ST GRK LI R+
Sbjct: 578 KKSRGASEKASGSSFSMEQLKTAINGGGINKMTVVQLRDLLATKGMSTAGRKMELIERV 636
>gi|408393271|gb|EKJ72536.1| hypothetical protein FPSE_07173 [Fusarium pseudograminearum CS3096]
Length = 1808
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 166/660 (25%), Positives = 295/660 (44%), Gaps = 72/660 (10%)
Query: 4 DPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIA 60
D D R+D++E + E + ++A K+ ++ +D S M P++ + + + A
Sbjct: 3 DKQDWRREDEDEGEQEVDENSYKAQKDAILLAIDVSKSMLEPPPPSDSKKADRDSPVQAA 62
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLN---------AVFVFNVAEREQLD 111
+ C ++ +II+ D + I F T K K QD ++F LD
Sbjct: 63 LKCAYHLMEQRIISNPKDMMGILLFGTEKSK-FQDSGDGRGGLGYPHCYLFT-----DLD 116
Query: 112 RPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRIL 171
P A +K ++ E+ + S+ N L+ A + ++ +R+
Sbjct: 117 VPAAEDVKA---LKALVEEGEDEDEVLTPSDEPVSMSNVLFCANQIFTTKAANFGSRRLF 173
Query: 172 LFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI 231
+ T+ +P S + A RAKD DLGI I+L P++ D F V FY D+I
Sbjct: 174 IVTDNANPHASDRQAKS-----AAAVRAKDLYDLGIMIDLFPITRGDNTFDVHKFYDDII 228
Query: 232 ---------------GLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIAN 275
GD L L L + + + +KR + + F IA
Sbjct: 229 YRDPVGEANMSEVRTSKSGDGLTL--------LSSLISNVNSKQTAKRALFSNLPFEIAP 280
Query: 276 GLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEP-AKRFQPYK 332
GL I + Y ++ VP WLD E + I D ++++ K+ +
Sbjct: 281 GLRISVKGYNIVHRQVPARTCYIWLDGEKAQIASGETTRIAEDNAKVIEKGDIKKAYKFG 340
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
GE + F+ E +K + +R+ GFKP S L + + + STF+FPS+++ +GS+ +F
Sbjct: 341 GEYVYFTPDEQKSLKDFGSPIIRIIGFKPRSSLPVWASTKKSTFIFPSEEDYIGSSRVFT 400
Query: 393 ALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDD 448
AL + +L+ ++ +A+ +N P L A++ E +G P G+ + LP+ DD
Sbjct: 401 ALWQKLLKDDKMGIAWCITRANAQPMLAAIIPSRERSDDDSGTPYLPAGLWIYPLPFQDD 460
Query: 449 IRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALA 506
+R + V R SD+ + +++++ L ++ ++ NP+LQ HY +LQALA
Sbjct: 461 LRNINP----PSEVLRTSDELTTQMRTIVQQLQLPKAMYNPSKYPNPALQWHYRILQALA 516
Query: 507 LEEDDMPEIKDETVPDEEGMAR--PGVVK------AVEEFKLSVYGDNYDEEGDVKVSEA 558
LEE+ + D T P + +++ G ++ A E K++ E D
Sbjct: 517 LEEEVPEKADDATEPKYKAISKRAGGYLEDWSECLAQEAGKVANSKATKRETDDEDAERP 576
Query: 559 SRKRKAATENAAKECANYDWADLA-DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
++K + ++E A+ + + A + G + +MTV +LK L +ST GRK LI R+
Sbjct: 577 AKKSRGSSEKASGSSFSMEQLKAAINGGGINKMTVVQLKDLLATKGMSTAGRKMELIERV 636
>gi|403283210|ref|XP_003933019.1| PREDICTED: X-ray repair cross-complementing protein 6 [Saimiri
boliviensis boliviensis]
Length = 554
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 281/606 (46%), Gaps = 96/606 (15%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASKAMFESQ--SEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSR 143
T K KN + ++V ++LD P A+ I E D F+ + G + ++
Sbjct: 89 GTEKDKNSVNFKNIYVL-----QELDNPGAKRILELDQ----FKGQQGQKRFQELMGHGS 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
+ SL LWV L K + KRI+LFTNED+P G+ +AK RT +A D +
Sbjct: 140 DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGN--DSAKASRART---KAGDLR 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFS 262
D GI ++L+ L P F +S FY D+I + E +DL + Q LED+ ++R +
Sbjct: 195 DTGIFLDLMHLKKPG-GFDISLFYRDIISIAEDEDLRVHFEECSQ-LEDLLRKVRAKETR 252
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR + R+ + + I + Y L++ + L TN P+KT+ R+F + G L+
Sbjct: 253 KRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLL 312
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q G + FS + + +
Sbjct: 313 PSDTKRSQV--GSSTLFS----------------------------------ALLIKCLE 336
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQD-EIVRAGGQVEPPGMHM 440
KEV AL R R N P VALV QD E+ QV PPG +
Sbjct: 337 KEVA-------ALCRYTPRRN----------IPPYFVALVPQDEELDDQKIQVTPPGFQL 379
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
++LP++DD R + T+ + A+ ++V K A+++++ + F NP LQ+H+
Sbjct: 380 VFLPFADDKRKM----PFTEKI-MATPEQVDKMKAIVEKLRFT-YRSDSFENPVLQQHFR 433
Query: 501 VLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV---- 555
L+ALAL+ + + D T+P E M R G + V+EFK VY +Y+ EG V
Sbjct: 434 NLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL--VDEFKELVYPPDYNPEGKVTKRKHD 491
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLIS 615
+E S ++ E + +E + KG L + TV LK A+ L + +K+ L+
Sbjct: 492 NEGSGSKRPKVEYSEEELKTH-----ISKGALGKFTVPMLKEACRAYGLKSGLKKQELLE 546
Query: 616 RILTHM 621
+ H
Sbjct: 547 ALTKHF 552
>gi|322695392|gb|EFY87201.1| ku70 protein [Metarhizium acridum CQMa 102]
Length = 645
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 163/648 (25%), Positives = 301/648 (46%), Gaps = 54/648 (8%)
Query: 7 DVFRDDDEESDNEFYQE-HEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIAVSC 63
D R+D+++ D E + ++A K+ ++ ++ S M P++ + ++ A+ C
Sbjct: 7 DWKREDEDDGDQEIDETTYKAQKDAIIMAIEVSDSMMKPPPPSDSKKADQDSALEAALKC 66
Query: 64 IAQSLKTQIINRLYDEVAICFFNTRKKKNLQD---LNAVFVFNVAEREQLDRPTARFIKE 120
++ +II+ D + I F T+K K D N + N LD P+A +K
Sbjct: 67 AYHLMEQRIISNPKDMMGILLFGTKKTKFYNDEDGRNGLGYPNCYLFTDLDIPSADDVKV 126
Query: 121 FDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
++ E E + + S + N L+ A + ++ +R+ + T+ D+P
Sbjct: 127 LKNLVEDGEDD---DEVLTPSSDRAIMSNVLFCANQIFTTKAANFGSRRLFIITDNDNPH 183
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG----LEGD 236
S K A RAKD DLG++I+L P++ D +F +S FY D++ E +
Sbjct: 184 PSDKAAMS-----AAAVRAKDLYDLGVTIDLFPITRDDSKFDLSKFYDDIVYRDPIAEAN 238
Query: 237 DLALFMPSAGQKLE---------DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
A+ + +G L + K ++ MFS + F IA GL I + Y ++
Sbjct: 239 STAVAISKSGDGLSLLSSLTSNINSKQTPKRAMFS-----NLPFEIAPGLRISVKGYNVL 293
Query: 288 RPTVPG--AITWLDSVTNHPLKTERSFICAD-TGALMQEPAKRFQPYKGENIKFSVQELS 344
P WL+ E + + D T + + K+ + GE + F+ E
Sbjct: 294 HRQTPARTCYIWLEGEKPQIATGETTRLAEDSTRTVEKGEMKKAYKFGGEYVYFTPDEQK 353
Query: 345 EIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRF 404
++ +R+ GFKP L + +++ STF+FPS+++ VGST +F AL + +++ N+
Sbjct: 354 SLRDFGPPVIRIIGFKPRKLLPIWASVKKSTFIFPSEEDFVGSTRVFTALWQKLIKDNKI 413
Query: 405 AVAFYGNPSN--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD 460
+A+ SN P L A+V E ++G P G+ + LP++DD+R ++ D
Sbjct: 414 GIAWCIVRSNSQPILAAIVPSRERSDDKSGTPYLPAGLWIYPLPFADDLREIKP----PD 469
Query: 461 AVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE 518
V ++SD+ + +++++ L ++ ++ NP+LQ HY +L+ALALEE+ +D
Sbjct: 470 GVMQSSDELKTQMRTIVQQLQLPKAMYNPLKYPNPALQWHYKILKALALEEEVPETAEDA 529
Query: 519 TVPDEEGMA-RPGVV------KAVEEFKLSVYGDNYDEEGDVKVS--EASRKRKAATENA 569
T P + ++ R G K E+ + + E D +VS ++R A+ +
Sbjct: 530 TKPKYKAISKRAGGYLEEWSGKLEEDAGTARTSKSLKREADDEVSYRPVKQRRGASGQVN 589
Query: 570 AKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ + + G + +MTV +L+ + LST G+K L RI
Sbjct: 590 PSSMSVAELKEAIASGAIMKMTVSQLRDIAGSKGLSTAGKKAELAERI 637
>gi|225679444|gb|EEH17728.1| DSB repair complex subunit Ku70 [Paracoccidioides brasiliensis
Pb03]
Length = 654
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 179/672 (26%), Positives = 304/672 (45%), Gaps = 95/672 (14%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQT---DETHFHIAVS 62
DD F +++E+ D Y+ K+ V++ ++ S M T P D E+ A+
Sbjct: 11 DDGF-EEEEDIDETVYK---TVKDAVLFAIEISESML-TPPPDGDSKRADKESPATAALK 65
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDRP 113
C ++ +II+ D + I + T K K + + ++F LD P
Sbjct: 66 CAYHMMQQRIISNPKDMIGILLYGTEKSKFYDEEESGRGNLSYPRCYLFT-----DLDVP 120
Query: 114 TARFIKEFD---HIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKR 169
A +K+ H EE ++ I+ S+E S+ N L+ A + + + +R
Sbjct: 121 AAEDVKKLRALVHDEEEADQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSRR 173
Query: 170 ILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYAD 229
+ + T+ DDP +G + RAKD DLG+ IEL P+S P++EF S F+ D
Sbjct: 174 LFIVTDNDDPHSKDRG-----LRSAATVRAKDLYDLGVIIELFPISRPNQEFDRSKFFDD 228
Query: 230 MI--GLEGDDLALFMPSAGQKLEDMKDQLRKR------MFSKRIVKRISFI-----IANG 276
+I D A + + D + + SK + +R F I
Sbjct: 229 IIYKASPTDPEAPAFSTQTKSSTSGGDGISLLKSLLSSINSKSVPRRALFSNVPLEIGPD 288
Query: 277 LSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFIC-------ADTGALMQEPAKR 327
I + Y + + P WL E IC AD A E +
Sbjct: 289 FKISVTGYLIFKRQEPARSCYVWLGG--------EEPQICNGITTQMADDSAREVEKWEI 340
Query: 328 FQPYK--GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
+ YK GE I F++ E + ++ +R+ GFKP+S L + +++ TF++PS++ V
Sbjct: 341 RKSYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYV 400
Query: 386 GSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIY 442
GST +F AL++++L+ + A+ ++ N P + A++ + ++ G Q+ P GM ++
Sbjct: 401 GSTRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKAKLNEYGEQMIPQGMWILP 460
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYA 500
LP++DDIR + +T+ + A D+ V K +++ + L + ++ NPSLQ HY
Sbjct: 461 LPFADDIR----QNPETNLI-IAPDELVDKMRTVIQFLQLPKAQYDPQKYPNPSLQWHYR 515
Query: 501 VLQALALEEDDMPEIKDETVPDEEGM-ARPG--VVKAVEEFK------------LSVYGD 545
+LQALAL+ED + +D+T+P + R G V+ EE + +S
Sbjct: 516 ILQALALDEDLPEKPEDKTIPKYRQIDKRAGEHVIAWGEELESQYLKMETEQPFISTLVK 575
Query: 546 NYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLS 605
++ E R K A A A + +KG L ++TV LK +L + NLS
Sbjct: 576 RPASRSQEQIKEEPRPAKKAKTGADAVGAGDEVRMHYEKGTLNKLTVTFLKEFLQSQNLS 635
Query: 606 TTGRKETLISRI 617
TTG+K LI R+
Sbjct: 636 TTGKKADLIERV 647
>gi|302881903|ref|XP_003039862.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
gi|256720729|gb|EEU34149.1| hypothetical protein NECHADRAFT_85723 [Nectria haematococca mpVI
77-13-4]
Length = 1793
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 169/660 (25%), Positives = 294/660 (44%), Gaps = 73/660 (11%)
Query: 4 DPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQTD---ETHFHI 59
D D R+D++E + E + ++A K+ ++ +D S M P D ++
Sbjct: 3 DKQDWRREDEDEGEQEIDENSYKAQKDAILLAIDVSKSMLEPP-PHSDSKKADRDSPVQA 61
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLN---------AVFVFNVAEREQL 110
A+ C ++ +II+ D + I F T K K QD ++F L
Sbjct: 62 ALKCAYHLMEQRIISNPKDMMGILLFGTEKSK-FQDSGDGRSGLGYPHCYLFT-----DL 115
Query: 111 DRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRI 170
D P A +K ++ E+ + S+ N L+ A + ++ +R+
Sbjct: 116 DVPAAEDVKA---LKALVEEGEDEDEVLTPSEEPASMANVLFCANQIFTTKAANFGSRRL 172
Query: 171 LLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADM 230
+ T+ DDP S K A RAKD DLGI I+L P++ DE F ++ FY D+
Sbjct: 173 FIVTDNDDPHASDKQARS-----AAAVRAKDLYDLGIIIDLFPITRGDETFDLNKFYDDI 227
Query: 231 I---------------GLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIA 274
I GD L L L + + + +KR + + F IA
Sbjct: 228 IYRDPVGEANMSEIRTSKSGDGLTL--------LNSLISNVNSKQTAKRALFSNLPFEIA 279
Query: 275 NGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEP-AKRFQPY 331
GL I + Y ++ P WLD E + I D+ +++ K+ +
Sbjct: 280 PGLRISVKGYNIVHRQTPARTCYIWLDGEKPQIAAGETTRIAEDSARTVEKGETKKAYKF 339
Query: 332 KGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIF 391
GE + F+ E +K + +R+ GFK S L + +++ STF+FPS+++ VGST +F
Sbjct: 340 GGEYVYFTPDEQKSLKDFGSPIIRIIGFKSRSQLPIWASVKKSTFIFPSEEDFVGSTRVF 399
Query: 392 IALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSD 447
AL + +L+ ++ +A+ +N P L A++ E +G P G+ + LP+ D
Sbjct: 400 TALWQKLLKDDKIGLAWCITRANAQPILAAIIPSRERSDDESGTPYLPAGLWIYPLPFLD 459
Query: 448 DIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQAL 505
D+R + + V R+SD+ + +++++ L ++ ++ NP+LQ HY +LQAL
Sbjct: 460 DLRSI----NPPGEVVRSSDELKTQMRTIVQQLQLPKAMYNPSKYPNPALQWHYKILQAL 515
Query: 506 ALEEDDMPEIKDETVPDEEGMAR--PGVVKAVEEF------KLSVYGDNYDEEGDVKVSE 557
ALEE+ + +D T P + +++ G ++ E ++S E D V
Sbjct: 516 ALEEEVPEKAEDTTEPKFKAISKRAGGYLEDWSETLEGEAGRVSSAKSTKREADDDDVKP 575
Query: 558 ASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
R R ++ + + + + G + +MTV +L+ L A LST GRK LI R+
Sbjct: 576 TKRSRGSSEKPSGSSLSTSQLKTAIESGGITKMTVVQLRDLLGAKGLSTAGRKMDLIERV 635
>gi|169619627|ref|XP_001803226.1| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
gi|160703865|gb|EAT79812.2| hypothetical protein SNOG_13012 [Phaeosphaeria nodorum SN15]
Length = 661
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 167/653 (25%), Positives = 314/653 (48%), Gaps = 80/653 (12%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDE 79
Q ++ K+ V++ +D SP M ED+ + + A+ C Q ++ +II+ D
Sbjct: 31 QAYKTMKDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDM 90
Query: 80 VAICFFNTRKKKNLQDLNAVF--VFNVAEREQLDRPTARFIKEF-DHIEESFEKEIGSQY 136
+ I F T +K +L+D ++ F + +A+ LD P+A+ +K D +E+ E E
Sbjct: 91 MGILLFGT-EKTDLKDGDSTFQHCYLLAD---LDVPSAQDVKRLRDLVEDEEEAE----- 141
Query: 137 GIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
I+ +++ S+ L+ A + + + +R+ L T+ D P + A D T
Sbjct: 142 QILKPAKDGASIATVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VNVKADKD---TA 195
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AG 246
+ RA+D DLG +I+L P+S PD+ F S FY D++ D + + + +G
Sbjct: 196 VTRARDLYDLGCTIDLFPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKVAKSG 255
Query: 247 QKLEDMKDQLRKRMFSKRIVKRISFII----ANGLSIELNTYALIRPT--VPGAITWLDS 300
+ + +K QL + SK +R F + L I + Y LI+ W+
Sbjct: 256 EGITLLK-QLISSINSKATPRRALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGG 314
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLH 357
+ + S + DT ++++ R + YK G+ I F+ E+ +I++ +R+
Sbjct: 315 DKPQIVSSSTSHMADDTARVVEKTELR-KAYKFGGDAITFTPDEIIKIRQAFGDPIIRII 373
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--P 415
GFKP+S L + N +TF++PS+ + +GST +F AL + +L+ + + ++ N P
Sbjct: 374 GFKPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAAP 433
Query: 416 RLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAA 474
L AL+ A+++ G Q PPG+ ++ LP++DDIR + S V + +D K
Sbjct: 434 ILSALIPAEEQTNEDGEQAMPPGLWLVPLPWADDIR---QFPSPAADVLKTTDALTDKMR 490
Query: 475 ALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR-PGV 531
+++++ L + ++ NP LQ Y +LQA+ALEE+ +PE PD++ M + +
Sbjct: 491 IIIEQLQLPKGVYDPAKYPNPDLQWFYRILQAMALEEE-LPE-----KPDDKTMPKFRQI 544
Query: 532 VKAVEEFKLSVYGDNYD--------------------EEGDVKVSEASRKRKAATENAAK 571
K E+ ++ YG ++ + GD K + K++ + +
Sbjct: 545 DKRCGEY-ITEYGAEFEAAFAQLAVSTFPHRGKRASADPGDDKPAPKRVKKEPKVKEEGE 603
Query: 572 E---CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ + A + +KG++ + TV LK +L ST+G+K L+ R+ ++
Sbjct: 604 DDEGLTDEQMATVNNKGQISKQTVAVLKAWLSQRGESTSGKKADLVERVQGYL 656
>gi|254749400|dbj|BAH86596.1| putative Ku70 protein [Magnaporthe grisea]
gi|440476434|gb|ELQ45031.1| hypothetical protein OOU_Y34scaffold00022g19 [Magnaporthe oryzae
Y34]
gi|440489081|gb|ELQ68761.1| hypothetical protein OOW_P131scaffold00219g18 [Magnaporthe oryzae
P131]
Length = 625
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 157/636 (24%), Positives = 298/636 (46%), Gaps = 62/636 (9%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTT--CPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDE 79
++++ K+ +++ +D S M ++ +++ A+ C Q ++ +II D
Sbjct: 4 RDYKTQKDAIIFAIDVSKSMLEEPEHSSSKKADNDSPLTAALKCANQIMQQRIIASPKDM 63
Query: 80 VAICFFNTRKKKNLQDLNAVFVF-NVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGI 138
+ I FNT + K L+D+ + + + LD P A +K + E E G+ +
Sbjct: 64 MGILLFNTERTK-LRDVTSGGSYPHCYLYLDLDIPEAEDVKMLRSLVEEGEDLEGA---L 119
Query: 139 VSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
V ++ N L+ A + +R+ + T+ DDP K + R
Sbjct: 120 VPSEEPATMANVLFCANQTFTTKAPNFGSRRLFIITDNDDPHSGDK-----AARASAAVR 174
Query: 199 AKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----GLEGDDLALFMPSAGQKLEDMKD 254
AKD DLG+ IEL P+S D++F ++ FY D+I E D++ +G L ++
Sbjct: 175 AKDLYDLGVIIELFPISKGDQKFDLAKFYDDIIYRDPTTEADEIK--HAKSGDGL-NLLS 231
Query: 255 QLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHP---- 305
L + SK+ KR + F +A GL+I + Y + P TW+ +
Sbjct: 232 SLISNINSKQTPKRAYFSHLPFEVAPGLTISVKGYIPLHVQKPARTTWVHTAGEKAELAL 291
Query: 306 LKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYL 365
+T + + + + + K+ + G+ I + +E +++K LR+ GFKP S +
Sbjct: 292 PETTKMEVSDSSRTVEKSELKKAYKFGGDYIHLTPEETAQLKDWGGHVLRIIGFKPRSMI 351
Query: 366 KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN--PSNPRLVALV-- 421
+ +++ ST++FP++++ VGST +F AL + +L+ ++ +A++ +NP LVA++
Sbjct: 352 PQWASIKKSTYIFPAEEDHVGSTRVFSALWKKLLKDDKVGLAWFVARVNANPVLVAIIPS 411
Query: 422 --AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
DE +G + P G+ + LP++DD+R +D V +A ++ K ++
Sbjct: 412 KRPSDE--ESGTKFLPAGLWLCTLPFADDLR-----ETDKRDVIKAPEELTAKMRKVVGN 464
Query: 480 IDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR--PGVVKAV 535
+ L + ++ NP+LQ HY +LQALAL+E+ + D T+P + +A+ G + +
Sbjct: 465 LHLPKGTYDPARYPNPALQWHYKILQALALDEEVPEQGDDPTLPKFKAIAKRVGGAIAEI 524
Query: 536 EE--------------FKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADL 581
E K D+ DE+ K ++ SR A + A ++
Sbjct: 525 NEDLEDAARVAQGQRALKREHEADDEDEK---KPAKKSRIEVATSAKAGATTSDSQLRAA 581
Query: 582 ADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ KL +MTV +LK L + +S G+K L+ ++
Sbjct: 582 HQQDKLVKMTVADLKAILTSKGISPVGKKAELVEKL 617
>gi|189209548|ref|XP_001941106.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977199|gb|EDU43825.1| Ku domain containing protein Pku70 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 655
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 173/665 (26%), Positives = 311/665 (46%), Gaps = 97/665 (14%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D SP M ++D+ E + A+ C Q ++ +II+ D +
Sbjct: 20 YKTIKDAVLFAIDVSPSMLQKPPKSDDKKAERDSPTSAALKCAYQLMQQRIISNPNDMMG 79
Query: 82 ICFFNTRKKKNLQDLNAVF--VFNVAEREQLDRPTARFIKEF----DHIEESFEKEIGSQ 135
I F T +K ++ D + F + +A+ LD P+A+ +K D+ EE+ E ++
Sbjct: 80 ILLFGT-EKTDVGDGDNAFEHCYLLAD---LDVPSAQDVKRLRDMVDNEEEAEEILKPAK 135
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
G S+ N L+ A + + + +R+ L T+ D P +K A D T
Sbjct: 136 GGA-------SISNVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VKIKADKD---TA 182
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AG 246
+ RA+D DLG +I+L P+S PD F S FY D++ D + + S +G
Sbjct: 183 VTRARDLYDLGCTIDLFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAISSTSKVAKSG 242
Query: 247 QKLEDMKDQLRKRMFSKRIVKRISFIIANGLS----IELNTYALIRPT--VPGAITWLDS 300
+ + +K QL + SK +R F + L I + Y LI+ + W+
Sbjct: 243 EGISLLK-QLISSINSKATPRRALFSLPLELGPDFRISVKGYILIKRQEHIKSCYVWVGG 301
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLH 357
+ + I D +++ R + YK G+ I F+ +E+++I++ +R+
Sbjct: 302 EKPQIATSSTTQISDDISRNIEKTELR-KAYKFGGDAITFTPEEITQIRQCFGEPIIRII 360
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--P 415
GFKPLS + + N STF++PS+ + +GST +F AL + +++ + + ++ N P
Sbjct: 361 GFKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQQKLIKSKKMGLVWFIPRRNAAP 420
Query: 416 RLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIR----PVEELHSDTDAVPRASDDEV 470
L AL+ ++I G Q PPG+ ++ LP++DDIR P E+ TDA+
Sbjct: 421 TLAALIPGVEKINEDGEQTMPPGLWLVPLPFADDIRQFPTPPEQPLKTTDAL-------T 473
Query: 471 KKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
K +++++ L + ++ NP LQ Y +LQALALEE+ D+T+P +
Sbjct: 474 DKMRLIIEQLQLPKGIYDPSRYPNPDLQWFYRILQALALEEELPDHPDDKTIPRYK---- 529
Query: 529 PGVVKAVEEFKLSVYGDNYDEEGDVKVSEA--------SRKRKAATENAAKE-------- 572
+ K E+ + YG + E + SEA ++KR A +A +
Sbjct: 530 -QIDKRCGEY-IEEYGKEFQEAYAQQHSEALAHRGKPVAKKRPAGGADADGKPAAKKVKK 587
Query: 573 --------------CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
+ A+L + G++ + TV LK +L++ N ST G+K L+ R+
Sbjct: 588 DPKVKAEDGDDEDGMTDEQMAELNNSGQISKQTVAVLKQWLVSRNQSTAGKKADLLERVQ 647
Query: 619 THMGK 623
++ +
Sbjct: 648 DYLDR 652
>gi|121929599|sp|Q0U5F2.1|KU70_PHANO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
Length = 652
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 166/651 (25%), Positives = 313/651 (48%), Gaps = 80/651 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D SP M ED+ + + A+ C Q ++ +II+ D +
Sbjct: 24 YKTMKDAVLFAIDVSPSMLERPPKTEDKKADRDSPTSAALKCAYQLMQQRIISNPNDMMG 83
Query: 82 ICFFNTRKKKNLQDLNAVF--VFNVAEREQLDRPTARFIKEF-DHIEESFEKEIGSQYGI 138
I F T +K +L+D ++ F + +A+ LD P+A+ +K D +E+ E E I
Sbjct: 84 ILLFGT-EKTDLKDGDSTFQHCYLLAD---LDVPSAQDVKRLRDLVEDEEEAE-----QI 134
Query: 139 VSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
+ +++ S+ L+ A + + + +R+ L T+ D P + A D T +
Sbjct: 135 LKPAKDGASIATVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VNVKADKD---TAVT 188
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AGQK 248
RA+D DLG +I+L P+S PD+ F S FY D++ D + + + +G+
Sbjct: 189 RARDLYDLGCTIDLFPISQPDQTFDRSRFYDDLVYPTSPSDPDAPIAVATTTKVAKSGEG 248
Query: 249 LEDMKDQLRKRMFSKRIVKRISFII----ANGLSIELNTYALIRPT--VPGAITWLDSVT 302
+ +K QL + SK +R F + L I + Y LI+ W+
Sbjct: 249 ITLLK-QLISSINSKATPRRALFSLPLELGPDLRIGVKGYILIKRQEHAKSCYVWVGGDK 307
Query: 303 NHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLHGF 359
+ + S + DT ++++ R + YK G+ I F+ E+ +I++ +R+ GF
Sbjct: 308 PQIVSSSTSHMADDTARVVEKTELR-KAYKFGGDAITFTPDEIIKIRQAFGDPIIRIIGF 366
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRL 417
KP+S L + N +TF++PS+ + +GST +F AL + +L+ + + ++ N P L
Sbjct: 367 KPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKMGLVWFIARRNAAPIL 426
Query: 418 VALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAAL 476
AL+ A+++ G Q PPG+ ++ LP++DDIR + S V + +D K +
Sbjct: 427 SALIPAEEQTNEDGEQAMPPGLWLVPLPWADDIR---QFPSPAADVLKTTDALTDKMRII 483
Query: 477 MKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR-PGVVK 533
++++ L + ++ NP LQ Y +LQA+ALEE+ +PE PD++ M + + K
Sbjct: 484 IEQLQLPKGVYDPAKYPNPDLQWFYRILQAMALEEE-LPE-----KPDDKTMPKFRQIDK 537
Query: 534 AVEEFKLSVYGDNYD--------------------EEGDVKVSEASRKRKAATENAAKE- 572
E+ ++ YG ++ + GD K + K++ + ++
Sbjct: 538 RCGEY-ITEYGAEFEAAFAQLAVSTFPHRGKRASADPGDDKPAPKRVKKEPKVKEEGEDD 596
Query: 573 --CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ A + +KG++ + TV LK +L ST+G+K L+ R+ ++
Sbjct: 597 EGLTDEQMATVNNKGQISKQTVAVLKAWLSQRGESTSGKKADLVERVQGYL 647
>gi|330924860|ref|XP_003300810.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
gi|311324871|gb|EFQ91096.1| hypothetical protein PTT_12162 [Pyrenophora teres f. teres 0-1]
Length = 659
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 172/662 (25%), Positives = 306/662 (46%), Gaps = 95/662 (14%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
++ K+ V++ +D SP M ++++ E + A+ C Q ++ +II+ D +
Sbjct: 24 YKTIKDAVLFAIDVSPSMLQQPPKSDNKKAERDSPTSAALKCAYQLMQQRIISNPNDMMG 83
Query: 82 ICFFNTRKKKNLQDLNAVF--VFNVAEREQLDRPTARFIKEFDHI---EESFEKEIGSQY 136
I F T +K ++ D + F + +A+ LD P+A+ +K + EE E+ +
Sbjct: 84 ILLFGT-EKTDMGDGDNAFEHCYLLAD---LDVPSAQDVKRLRDLVDNEEEAEEILKPAK 139
Query: 137 GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
G S + N L+ A + + + +R+ L T+ D P +K A D T +
Sbjct: 140 GGAS------ISNVLFCANQIFTTKAPNFSSRRLFLVTDNDYP---VKVKADKD---TAV 187
Query: 197 QRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AGQ 247
RA+D DLG +I+L P+S PD F S FY D++ D + +PS +G+
Sbjct: 188 TRARDLYDLGCTIDLFPISQPDHSFDRSRFYDDLVYPTSPSDPDAPVAIPSTTKVAKSGE 247
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLS----IELNTYALIRPT--VPGAITWLDSV 301
+ +K QL + SK +R F + L I + Y LI+ + W+
Sbjct: 248 GISLLK-QLISSINSKATPRRALFSLPLELGPDFRIGVKGYILIKRQEHIKSCYIWVGGE 306
Query: 302 TNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQELSEIKRV-STGHLRLHG 358
+ T + +D + E A+ + YK G+ I F+ +E+++I++ +R+ G
Sbjct: 307 KPQ-IATSSTAQISDDISRNIEKAEIRKAYKFGGDAITFTPEEITQIRQCFGEPIIRIIG 365
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PR 416
FKPLS + + N S F++PS+ + +GST +F AL + +++ + + ++ N P
Sbjct: 366 FKPLSSVPIWANTNKSIFIYPSETDYIGSTRVFSALQQKLIKSKKMGLVWFIARRNAAPT 425
Query: 417 LVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIR----PVEELHSDTDAVPRASDDEVK 471
L AL+ E + G Q PPG+ ++ LP++DDIR P E+ TDA+
Sbjct: 426 LAALIPGAEKINGDGEQTMPPGLWLVPLPFADDIRQFPTPPEQPLKTTDAL-------TD 478
Query: 472 KAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP 529
K +++++ L + ++ NP LQ Y +LQALALEE+ D+T+P +
Sbjct: 479 KMRLIIEQLQLPKGIYDPSKYPNPDLQWFYRILQALALEEELPDHPDDKTIPRYK----- 533
Query: 530 GVVKAVEEFKLSVYGDNYDEEGDVKVSEA--------SRKRKAATENAAKECA------- 574
+ K E+ + YG + E + SEA +KR A +A + A
Sbjct: 534 QIDKRCGEY-IEDYGKEFQEAYAQQHSEALAHRGKPVEKKRPAGGTDADGKPAAKKVKKE 592
Query: 575 ---------------NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
+ A+L + G++ + TV LK +L + N S G+K L+ R+
Sbjct: 593 TKVKGEDGDGEDGLTDEQMAELNNSGQISKQTVAVLKQWLSSRNQSIAGKKAGLLERVQD 652
Query: 620 HM 621
++
Sbjct: 653 YL 654
>gi|256079194|ref|XP_002575874.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 1269
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 152/648 (23%), Positives = 297/648 (45%), Gaps = 67/648 (10%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMF--------STTCPAEDQTDETHFHIAVS 62
D+++E D++ Q+ + V++L+D +P M +++ + + ++ F +++
Sbjct: 649 DNEQEQDSKPLQD---MRSGVIFLIDCTPTMLGLHGSFDLNSSNAVDSSSVKSGFDLSLL 705
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD 122
C + + ++ +D + + T + ++V N+ + L + I E +
Sbjct: 706 CCQTFQQNKALHSPFDMIGLVLMRTSE-------SSVDTKNIMVLQPLGLADSTRILEIE 758
Query: 123 HIEESFEKEIGSQYGIVSGSRENS--LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
+ + E+ +YG + + L+ ALW Q S K I L T++ DP
Sbjct: 759 KLRQLKPDELEKRYGTIVNQPNITFPLHEALWACQNQFITSSKTFGIKHIFLLTDDPDPV 818
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE----GD 236
K A ++ R + + D + GI +E++P+ + +F Y +++ E
Sbjct: 819 N--KNA---NLKRRAIAKMADMKQYGIELEVIPIKQQNTKFDYKLLYDELLEDELMYPDV 873
Query: 237 DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIAN--GLSIELNTYALIRPTVPGA 294
D + + P ++L+++ ++ + + R+ F + + L++ ++ Y L+ PT +
Sbjct: 874 DKSSYHPDPTERLDELLSRINSHELRRSRLARLPFHLGSSKNLTLGISVYCLVYPTRLPS 933
Query: 295 ITWLDSVTNHPLKTERSF--ICADTGALMQEPAKRFQP---------YKGENIKFSVQEL 343
WL S N ++ R + I G+ +P K P G I F EL
Sbjct: 934 PIWLSSSDNKTVRVHRDYYKIIDPYGSF--DPVKDLLPSHDLVRGIKLDGRYICFDKDEL 991
Query: 344 SE-IKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLN 402
+E ++ ++ L L GF +LK Y+ +RP+ F++P +K + GS F AL L
Sbjct: 992 TEAVRNIAPVGLHLLGFISQKFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRK 1051
Query: 403 RFAVAFYGNPSN--PRLVALVAQDEIVR-----AGGQVEPPGMHMIYLPYSDDIRPVEEL 455
A+A Y PRLVAL+ Q E Q PPG H+I+LPY+DD R +E
Sbjct: 1052 LLAIAIYVQRKGQFPRLVALLPQAEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIE-- 1109
Query: 456 HSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEI 515
T+ + A++ +V A A+++++ + F+ Q NP+LQR Y++L+ALAL + E+
Sbjct: 1110 -IPTNEI--ANESQVDIAKAMIRKL-MVPFTPGQIENPTLQRFYSLLEALALNRETQSEV 1165
Query: 516 KDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC-A 574
D T+P R +A EE L+ + + ++ + V + R ++ K C +
Sbjct: 1166 VDHTLPKLGAFKR----RANEE--LTAFKECFNLNNE-SVFKKPRPTQSTYNQETKCCLS 1218
Query: 575 NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKET-LISRILTHM 621
+ + G L + T+ L+ + + L + K++ +I +I+ H
Sbjct: 1219 ETECKEAVQSGNLHKYTIPVLRETIKSLGLKISASKKSDIIEKIMNHF 1266
>gi|353231766|emb|CCD79121.1| acylaminoacyl-peptidase (S09 family) [Schistosoma mansoni]
Length = 608
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 148/628 (23%), Positives = 286/628 (45%), Gaps = 64/628 (10%)
Query: 31 VVYLVDASPKMF--------STTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAI 82
V++L+D +P M +++ + + ++ F +++ C + + ++ +D + +
Sbjct: 5 VIFLIDCTPTMLGLHGSFDLNSSNAVDSSSVKSGFDLSLLCCQTFQQNKALHSPFDMIGL 64
Query: 83 CFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGS 142
T + ++V N+ + L + I E + + + E+ +YG +
Sbjct: 65 VLMRTSE-------SSVDTKNIMVLQPLGLADSTRILEIEKLRQLKPDELEKRYGTIVNQ 117
Query: 143 RENS--LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
+ L+ ALW Q S K I L T++ DP K A ++ R + +
Sbjct: 118 PNITFPLHEALWACQNQFITSSKTFGIKHIFLLTDDPDPVN--KNA---NLKRRAIAKMA 172
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE----GDDLALFMPSAGQKLEDMKDQL 256
D + GI +E++P+ + +F Y +++ E D + + P ++L+++ ++
Sbjct: 173 DMKQYGIELEVIPIKQQNTKFDYKLLYDELLEDELMYPDVDKSSYHPDPTERLDELLSRI 232
Query: 257 RKRMFSKRIVKRISFIIAN--GLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSF-- 312
+ + R+ F + + L++ ++ Y L+ PT + WL S N ++ R +
Sbjct: 233 NSHELRRSRLARLPFHLGSSKNLTLGISVYCLVYPTRLPSPIWLSSSDNKTVRVHRDYYK 292
Query: 313 ICADTGALMQEPAKRFQP---------YKGENIKFSVQELSE-IKRVSTGHLRLHGFKPL 362
I G+ +P K P G I F EL+E ++ ++ L L GF
Sbjct: 293 IIDPYGSF--DPVKDLLPSHDLVRGIKLDGRYICFDKDELTEAVRNIAPVGLHLLGFISQ 350
Query: 363 SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVAL 420
+LK Y+ +RP+ F++P +K + GS F AL L A+A Y PRLVAL
Sbjct: 351 KFLKRYYYIRPAHFIYPDEKSIHGSRLWFTALLNRCLHRKLLAIAIYVQRKGQFPRLVAL 410
Query: 421 VAQDEIVR-----AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA 475
+ Q E Q PPG H+I+LPY+DD R +E T+ + A++ +V A A
Sbjct: 411 LPQAEQTNDDDGANRTQTIPPGFHIIFLPYADDFRDIE---IPTNEI--ANESQVDIAKA 465
Query: 476 LMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAV 535
+++++ + F+ Q NP+LQR Y++L+ALAL + E+ D T+P R +A
Sbjct: 466 MIRKL-MVPFTPGQIENPTLQRFYSLLEALALNRETQSEVVDHTLPKLGAFKR----RAN 520
Query: 536 EEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC-ANYDWADLADKGKLKEMTVQE 594
EE L+ + + ++ + V + R ++ K C + + + G L + T+
Sbjct: 521 EE--LTAFKECFNLNNE-SVFKKPRPTQSTYNQETKCCLSETECKEAVQSGNLHKYTIPV 577
Query: 595 LKLYLMAHNLSTTGRKET-LISRILTHM 621
L+ + + L + K++ +I +I+ H
Sbjct: 578 LRETIKSLGLKISASKKSDIIEKIMNHF 605
>gi|126632270|emb|CAM56211.1| ku70 protein [Claviceps purpurea]
Length = 616
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 155/639 (24%), Positives = 294/639 (46%), Gaps = 78/639 (12%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTTCPAEDQT--DETHFHIAVSCIAQSLKTQIINRLYDE 79
+ ++A K+ ++ +D S M + P+ + ++ A+ C ++ +II+ D
Sbjct: 13 RRYKAQKDAIIMAIDVSESMLKSPPPSNSKKADQDSPLEAALKCAYHLMEQRIISNPKDM 72
Query: 80 VAICFFNTRKKK--NLQDLNAVFVF-NVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY 136
+ I F T K K N + + N LD P+A +K+ + E + E
Sbjct: 73 MGILLFGTEKTKFHNEESGRGGLGYPNCYLFTDLDVPSADDVKKLKALVEEGDDE----E 128
Query: 137 GIVSGSRENSLY-NALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
+++ S+E + N L+ A + ++ +R+ + T+ DDP K AA
Sbjct: 129 KVLTPSKEPVIMSNVLFCANQIFTTKAANFGSRRLFIITDNDDPHPEDKAAAS-----AA 183
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG----LEGDDLALFMPSAG---QK 248
RAKD DLGI+I+L P+S D +F+ S FY D++ E + A+ +G
Sbjct: 184 AVRAKDLYDLGITIDLFPISHHDSKFEFSKFYDDIVYRDTVAEANVSAVPFSKSGDGLSL 243
Query: 249 LEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHP 305
L + + + KR + + F IA GL I + Y ++ P WLD T
Sbjct: 244 LSSLVSNINSKQTPKRSLFSNLPFEIAPGLRIAVKGYNILHRQTPARTCYIWLDGETPQL 303
Query: 306 LKTERSFICAD-TGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY 364
+ E + + D T + + K+ + GE + F+ +E ++ + +R+ GFKP
Sbjct: 304 AQGETTRLAEDSTRTVEKGEIKKAYKFGGEFVYFTPEEQKTLRDFGSPIIRIIGFKPRKL 363
Query: 365 LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVA 422
L + +++ STF+FPS+++ VGS+ +F AL + +++ ++F +A+ SN P L A++
Sbjct: 364 LPVWASVKKSTFIFPSEEDYVGSSRVFTALWQKLIKDDKFGLAWCVVRSNARPMLAAIIP 423
Query: 423 QDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
E +G P G+ + LP++DD+R ++ T + R++D+ K +++++
Sbjct: 424 SREGSDEDSGSPFLPAGLWIYPLPFADDLREIKT----TSQITRSTDELTTKMRTIVQQL 479
Query: 481 DLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR---------- 528
L ++ ++ NP+LQ HY +L+ALAL+E+ E D T P +++
Sbjct: 480 QLPKAMYNPMKYPNPALQWHYRILKALALDEEVPEEPDDATKPKSRAISKRAGGYLEEWS 539
Query: 529 ------PGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLA 582
G + +E K + D +D ++KR+ A
Sbjct: 540 GKLEQDAGSASSAKELKREIDDDGFD--------RPTKKRRGAA---------------- 575
Query: 583 DKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
G + +MTV +L+ ++ ++ G+K L+ +I T +
Sbjct: 576 --GDIMKMTVAQLRDVAVSKGINIAGKKAVLVDKIETWL 612
>gi|452843591|gb|EME45526.1| hypothetical protein DOTSEDRAFT_170971 [Dothistroma septosporum
NZE10]
Length = 658
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 163/649 (25%), Positives = 299/649 (46%), Gaps = 78/649 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFH---IAVSCIAQSLKTQIINRLYDEV 80
++ K+ V++ +D S M + ++ + +T A+ C ++ +II+ D +
Sbjct: 30 YKTVKDAVLFAIDVSRSMLTAPTDSDPKKPDTALSPTLAALKCAYALMQQRIISNPNDMM 89
Query: 81 AICFFNTRKKK-----------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFE 129
I F T + K LQ + + + LD P A +K+ ++ E
Sbjct: 90 GILLFGTERSKFQEGEDEGSRSGLQYPHCYLLTD------LDVPAAADVKQLRNL---VE 140
Query: 130 KEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKN 189
E + + + S E S+ N L+ A + + + +R+ L T+ D P A+
Sbjct: 141 DEEEAAELLQASSEEVSMANVLFCANQVFTTKAPNFSSRRLFLVTDNDYPH-----ASSR 195
Query: 190 DMTRTTMQRAKDAQDLGISIELLPLSPPDEE--FKVSHFYADMI------------GLEG 235
D + RAKD DLG++IEL P+S P+ F + FY D++ L
Sbjct: 196 DARNSAAVRAKDLYDLGVTIELFPISHPNRGYIFDRTKFYNDIVYSATPSDPDAPAPLSN 255
Query: 236 DDLAL--FMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVP 292
D A + L+ + + R +R + + F I GL I + ++LI+ P
Sbjct: 256 DIKAASSVVKDGISLLQSLISSVNSRAAPRRALFSSVPFEIGRGLRISIKGFSLIQRQEP 315
Query: 293 GAITWL----DSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIK 347
T++ DS + + DT +++ +R + GE I F+ +EL++I+
Sbjct: 316 KRTTYVYLPSDSGKAQIAVGSSTLVDEDTARTVEKVEIRRAYKFGGETISFTEEELAKIR 375
Query: 348 RVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA 407
LR+ GFKP+S L + ++ STF++PS+ VGST +F ALH+ +L+ ++ +A
Sbjct: 376 NFGDTVLRIIGFKPISLLPMWASVDKSTFIYPSEDGWVGSTRVFSALHQKLLKDDKMGLA 435
Query: 408 FYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPR 464
+Y N P+LVA++ +E G Q PPG+ + LP++DDIR E ++ R
Sbjct: 436 WYIPRKNSVPKLVAVIPGVEERNDEGEQKMPPGLWLKPLPWADDIREAPET-----SLVR 490
Query: 465 ASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
A D +++++ L + ++ NPSLQ Y +LQALALEED + D+T+P
Sbjct: 491 APDRVTDAMRIIVEQLQLPKAVYDPYRYPNPSLQWFYRILQALALEEDLPEQPDDKTLPK 550
Query: 523 EEGM---------ARPGVV-KAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKE 572
+ + A GV+ +A EE++ + + +K + A+ +K E+ +
Sbjct: 551 WKQIHKRAGGYVVAWGGVLDEAFEEWQT-------ENQKSIKTA-ANGGKKVKDEDDDEG 602
Query: 573 CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ D ++ + EL+ +L + NL T +K+ ++ + ++
Sbjct: 603 VTDAQMRTAYDADRISKFKNPELRAWLQSKNLRTGTKKQDMVDAVTSYF 651
>gi|19075945|ref|NP_588445.1| Ku domain protein Pku70 [Schizosaccharomyces pombe 972h-]
gi|74582874|sp|O94395.1|KU70_SCHPO RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|4008550|emb|CAA22471.1| Ku domain protein Pku70 [Schizosaccharomyces pombe]
Length = 607
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/634 (23%), Positives = 294/634 (46%), Gaps = 50/634 (7%)
Query: 11 DDDEESDNEFYQEHEATKEY-VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLK 69
++DE+ D E+ A +Y ++++++ SP M D+ + +A+ C Q
Sbjct: 2 ENDEQIDE---TENFAIGKYAILFVIEVSPSMLDPV----DEFTPSSLQMALICAYQLAA 54
Query: 70 TQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFE 129
++I D + + + T + N + + ++ D P A IK E+ F+
Sbjct: 55 QRVITNPSDIMGVLLYGTESSTG-RFANQMMLLDI------DPPDAERIKSLQSFEKDFQ 107
Query: 130 KEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKN 189
S+ S + SL + L+ ++ ++ +KR+ L T+ D P A +
Sbjct: 108 ---FSKEKFKPCSCQVSLSSVLYHC-SVIFTTKAENFEKRLFLITDNDHPAWD---ATER 160
Query: 190 DMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL--EGDDLALFMPSAGQ 247
D+ +QRAKD +DL I + + L PP F+++ FY+D + + D++ +
Sbjct: 161 DII---LQRAKDLRDLDIQVHPVFLDPPTHSFRINIFYSDFLYIVYGRQDVSNLVNRGQA 217
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS-----VT 302
+L+ M + + KR + + N + I + + L++ W+ +
Sbjct: 218 QLQHMLNMITALQKPKRAHFHLKMDLGNDVRIGVEAFILLKRLESAKTNWVYAKGERFAV 277
Query: 303 NHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPL 362
P + SF A L ++ +R Y G ++ F EL++++ LR+ GF+
Sbjct: 278 AVPQSKQVSF--ATKKELKKDEIRRSYSYGGSSVVFGSDELNKVRSFEPPTLRIIGFRDF 335
Query: 363 SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA-FYGNP-SNPRLVAL 420
S LK +H L+P+ F+ P D E++GS +F A+H+ +L N+ +A F P +NP VA+
Sbjct: 336 STLKPWHCLKPAVFLRPKDDEIIGSGAVFSAIHKKLLASNKIGIAWFVSRPNANPCFVAM 395
Query: 421 VAQDEIVRAGGQVE-PPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKR 479
+A + E P G+ ++ LP +DDIR + ++ + ++P + ++ +++
Sbjct: 396 LATPGSIHIRDDFELPLGIFLVQLPTADDIRSLPPINPNPISMP---SNLIETMQRILRG 452
Query: 480 IDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEF 538
++L+ + ++ NPSLQ HY VLQALAL+E+ + D T+P + + R G
Sbjct: 453 MELRSYQPGKYNNPSLQWHYKVLQALALDEEIPTDFVDNTLPKYKAIQKRVGEYMGDVNN 512
Query: 539 KLSVYGDNYDEEGDVKVSEASRK---RKAATENAAKECANYD------WADLADKGKLKE 589
++ Y ++ ++ +K E + +KA E + K D + + ++K
Sbjct: 513 IVAEYRNDISDKNGIKEEEEDQGPIVKKARIEKSGKPIFAEDDRLKQLYIEGVLDKEIKA 572
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
+ V +LK L L +G+K L+ + ++ K
Sbjct: 573 LKVSQLKDILRDRGLRVSGKKADLLDNLTNYVKK 606
>gi|159126402|gb|EDP51518.1| DSB repair complex subunit Ku70, putative [Aspergillus fumigatus
A1163]
Length = 690
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 168/684 (24%), Positives = 310/684 (45%), Gaps = 106/684 (15%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++A ++ V++ ++ S M T P+ D + +E+ A+ C ++ +II+ D +
Sbjct: 24 YKAVRDAVLFAIEVSDSML-TPRPSSDPKKRVEESPTTAALKCAYYLMQQRIISNPRDMI 82
Query: 81 AICFFNTRKKK-------NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ + T+ + + DL+ + + LD P+AR +KE + E + G
Sbjct: 83 GVLLYGTQASRFYDEDENSRGDLSYPHCYLFTD---LDVPSAREVKELRALAE----DEG 135
Query: 134 SQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMT 192
++ S+E S+ N L+ A + + +R+ + T+ D+P G +++ +
Sbjct: 136 KARDVLVPSKERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD----SRSQRS 191
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----------GLEGDDLALFM 242
T+ RAKD DLG++IEL P+S P+ EF S FY D+I + D +
Sbjct: 192 AATV-RAKDLYDLGVTIELFPISQPEHEFDSSKFYDDIIYKTSPTDAEAPVYLKDDSKVS 250
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AI 295
++G + + + L + S+ + +R F + I + Y L + P
Sbjct: 251 TASGDGIS-LLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYLLFKRQAPARSCY 309
Query: 296 TWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGEN--IKFSVQELSEIKRVSTGH 353
WL +K + I DT +++ R + YK N + F+ +E ++
Sbjct: 310 VWLGGEKPQIVKGVTTQIADDTARTVEKSEIR-KAYKFGNDQVSFTPEEQKALRHFGDPV 368
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFKPLS L + N++ F++PS+++ VGST +F ALH+ +L+ ++ A+ ++
Sbjct: 369 IRIIGFKPLSALPFWANVKHPFFIYPSEEDYVGSTRVFSALHQKLLKDHKMALVWFIPRK 428
Query: 414 N--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEV 470
N P L A++A +E V G Q PPGM +I LPY+DD+R + + + P D++
Sbjct: 429 NAAPVLGAMIAGEEKVDENGVQKFPPGMWIITLPYADDVR--QNPETTLNVAPEPLIDQM 486
Query: 471 KKAAALMKRIDLKDFSV--------CQFAN-----------PSLQRHYAVLQALALEEDD 511
+ +++++ L S C+ N +LQ HY +LQALAL+ED
Sbjct: 487 R---TIVQQLQLPKASYEPQKYPNPCKLGNNLLTSNADLLPAALQWHYRILQALALDEDL 543
Query: 512 MPEIKDETVPDEEGM-ARPG--VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATEN 568
+ +D+T+P + R G V+ +E + V +++ R A ++
Sbjct: 544 PEKPEDKTIPKYRQIDKRAGDYVLSWADELEKQYAASATHGTKSTLVKRSAKDRAADSDE 603
Query: 569 AAKECA------------------NYDWADLADKGKLK-------------EMTVQELKL 597
A+ + +Y+ L+ +L ++TV LK
Sbjct: 604 ASSHPSKRIKSESGPEGVDAEVRLHYEKGSLSKVSRLHADCLNVTNQSYVIQLTVAVLKD 663
Query: 598 YLMAHNLSTTGRKETLISRILTHM 621
+L AH ST G+K LI R+ +M
Sbjct: 664 FLTAHGRSTAGKKADLIERVEEYM 687
>gi|41054011|ref|NP_956198.1| X-ray repair cross-complementing protein 6 [Danio rerio]
gi|31544956|gb|AAH53270.1| X-ray repair complementing defective repair in Chinese hamster
cells 6 [Danio rerio]
Length = 409
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 198/373 (53%), Gaps = 23/373 (6%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +V+LVDAS +MF + + ++F + + C+ ++II+ D VA+ F+
Sbjct: 29 SGRDSLVFLVDASKEMFIKG----ENGEPSNFDMTMQCVRSVYTSKIISSDRDLVALVFY 84
Query: 86 NTRKKKNLQD-LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG-IVSGSR 143
T + KN ++ V+V++ L+ P A+ +++ D ++ + G Q+ GS
Sbjct: 85 GTEQSKNPRNSFKHVYVYH-----DLESPGAKRVQDIDKLK----GDKGGQFAEKTMGSG 135
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
E SL ALW L + + KR+++FT D+P G +AK+ RT +A D +
Sbjct: 136 ETSLGEALWCCSNLYSDIKLRLSHKRLMIFTCRDEPHGG--DSAKDRQART---KAADLK 190
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMP-SAGQKLEDMKDQLRKRMFS 262
+ G++I+L+ LS P F VS F+ D++ D+ L + +KLED++ ++R +
Sbjct: 191 ETGVAIDLMHLSKPGG-FDVSLFFCDIVSPPEDESELGLQIEPCRKLEDLQKRVRAKELK 249
Query: 263 KRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE-RSFICADTGALM 321
KR R++F + G+ + + Y L R + + L N P++T+ R F G L+
Sbjct: 250 KRAQCRLTFSLGEGVDLAVGVYVLARTAMKPSAVKLYRDNNEPVRTKSRLFHTQTGGILL 309
Query: 322 QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD 381
KR Q Y + I E+ EIK+ L L GFKP+ LK +H+LRP+ F++P +
Sbjct: 310 PNDTKRAQVYGQKQIVMEKDEVDEIKKFDDPGLVLIGFKPIDRLKLHHHLRPALFIYPEE 369
Query: 382 KEVVGSTCIFIAL 394
+++ GS+C+F AL
Sbjct: 370 EQISGSSCMFTAL 382
>gi|378730608|gb|EHY57067.1| ATP-dependent DNA helicase 2 subunit 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 681
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 157/625 (25%), Positives = 288/625 (46%), Gaps = 90/625 (14%)
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNL-QDLNAVFVFNVAE---REQLDRPTA 115
A+ C ++ +II+ D++ I + T K +D N+ ++ LD P A
Sbjct: 73 ALKCAYHLMQQRIISTPRDKMGILLYGTEASKFYDEDENSRGGWSFPHCYLLTDLDVPEA 132
Query: 116 RFIKEFDHIEESFEKEIGSQYGIVSGSRENSL-YNALWVAQGLLRKGSSKTADKRILLFT 174
+K + E+ + E I S+E L +N L+ A + ++ ++ +R+ + T
Sbjct: 133 DDVKALKALTEAEDPESAD---IFKPSKEPVLMHNVLFCANQIFQQKAANFTSRRLFIVT 189
Query: 175 NEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--- 231
+ DDP S KG+ ++ T+ RAKD DLG++IEL P+S PD F S FY D+I
Sbjct: 190 DNDDPASSNKGS----RSQATV-RAKDLYDLGVTIELFPISTPDHSFDTSLFYDDIIYKS 244
Query: 232 --------------GLEGDDLALFMPS--AGQKLEDMKDQLRKRMFSKR-IVKRISFIIA 274
++G + L S L+ + + ++ KR + + ++
Sbjct: 245 SPSDPAAVTYNPPAMIDGGNSKLVAGSNDGISLLQSLLSNIASKVTPKRALFSSVPLELS 304
Query: 275 NGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICA---------DTGALMQEPA 325
L I + Y L + P ++ L ER I ++ + +
Sbjct: 305 PNLKISVKGYLLYKHQKPARSCYIY------LGAERPQIVTGYTEQVAFENSKPIQKAEI 358
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
++ + G+ I FS +E+ +++ +R+ GFKP+S L + N++ STF++PS+++ V
Sbjct: 359 RKAYTFGGQQITFSDEEVKQLRNFGDPVIRIIGFKPMSRLPLWANIKNSTFIYPSEEDYV 418
Query: 386 GSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV------AQDEIVRAGGQVE--- 434
GST ++ AL++ +L+ F + ++ N P + A++ A DE G
Sbjct: 419 GSTRVYSALYQKLLKDKLFGLTWFVPRRNAVPVMAAMIPTLPAEALDEKANTAGNSPTGA 478
Query: 435 PPGMHMIYLPYSDDIR---PVEELHSDTDAVPRASDDEVKKAAA-LMKRIDLKD--FSVC 488
P G+H++ LP++DD+R P H P + DE+ A ++++++L +
Sbjct: 479 PQGLHLVPLPFADDVRQNPPTTHEH------PLLAPDELVDAMRHIIQQLNLPKGIYDPS 532
Query: 489 QFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKL--SVYGDN 546
++ NPSLQ HY +LQALAL+ED + +D+T+P + + + +A+E + Y
Sbjct: 533 KYPNPSLQWHYRILQALALDEDIPEKPEDKTIPKYKQIDKRVGNEAIEWGSILDKAYKHY 592
Query: 547 YDEEGDVKVSEASRKR--------------KAATENAAKECANYDWADLADKGKLKEMTV 592
+ E D + + R KA T + E + L KG+L +TV
Sbjct: 593 HAENPDAVPTGSKRPTKASAATSTASTKKVKAETSDKTGE---EEIRRLWQKGQLGHLTV 649
Query: 593 QELKLYLMAHNLSTTGRKETLISRI 617
+LK + A + TG+K ++ R+
Sbjct: 650 AQLKEFCAAKKIPATGKKADIVERV 674
>gi|398404460|ref|XP_003853696.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
gi|339473579|gb|EGP88672.1| hypothetical protein MYCGRDRAFT_85040 [Zymoseptoria tritici IPO323]
Length = 644
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 165/642 (25%), Positives = 288/642 (44%), Gaps = 68/642 (10%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFH---IAVSCIAQSLKTQIINRLYDEV 80
++ TK+ V++ +D S M + A+ + +T A+ C ++ +II+ D +
Sbjct: 20 YKTTKDAVLFAIDVSESMLAKPSEADPKKPDTGLSPTVAALKCAYSLMQQRIISNPSDMM 79
Query: 81 AICFFNTRKKKNLQD-----LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ 135
I F T K K + A+ + LD P A +K + + + E S
Sbjct: 80 GILLFGTEKSKFQEGDEKTGSGALQYPHCYLLTDLDVPAAADVK---LLRDLVDDEEESA 136
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
+ + E S+ N L+ A + + +R+ + T+ D P + + D +
Sbjct: 137 AILQASPEEVSMANVLFCANQVFTTKAPNFNSRRLFIVTDNDYPHPNSR-----DSRNSA 191
Query: 196 MQRAKDAQDLGISIELLPLSPPDEE--FKVSHFYADMI--GLEGDDLALFMPSAGQK--- 248
RAKD DLG++IEL P+S PD + F S FY D++ D A +A K
Sbjct: 192 AVRAKDLYDLGVTIELFPISHPDRDYTFDRSKFYNDIVYSSTPADPDAPAPLTADIKAAS 251
Query: 249 ---------LEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPGAITWL 298
L+ + + R +R + + I G I + + +++ VP T++
Sbjct: 252 STAKDGISLLQSLISSVNSRSAPRRALFSSVPLEIGPGFRIGIKGFLILKRQVPKRSTYV 311
Query: 299 ----DSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGH 353
DS + + DT +++ +R + GE + F+ +EL+ I+
Sbjct: 312 YVPPDSEKAQLAVGSSTLVAEDTARTVEKIEIRRAFKFGGETVSFTDEELAAIQNYGDPI 371
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+R+ GFK L L + ++ STF++PS+ +GST +F ALH+++LR FA+A+Y
Sbjct: 372 IRIIGFKDLELLPAWAAIKESTFLYPSEDSFIGSTRVFSALHQTLLRKRYFALAWYIPRR 431
Query: 414 N--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEV 470
N PRLV L+ E A G Q PPG+ + LP++DDIR E ++ RA D+ V
Sbjct: 432 NAKPRLVGLLPGAEERNASGDQDMPPGLWVRPLPFADDIRSAPET-----SLVRAPDNVV 486
Query: 471 KKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEI-KDETVPDEEGMA 527
K +++ + L + ++ NPSLQ + +LQALALEE D+PE+ +D+T+P + +
Sbjct: 487 DKMRTVLQNLQLPGAVYDPKKYPNPSLQWFFRILQALALEE-DLPELPEDKTLPRWKQIH 545
Query: 528 RPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLAD---- 583
+ ++ Y + E D +E KA A + D + D
Sbjct: 546 K----------RVGGYVVEWGAELDAAFAEWEAANKANIHPTATGDEDDDEPGIDDAMMK 595
Query: 584 ----KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
K +L + V ELK + + +K L+ ++ +
Sbjct: 596 KAYEKDQLTKFKVTELKDWCALKGIKGKTKKADLVDAVIGYF 637
>gi|170589964|ref|XP_001899743.1| ATP-dependent DNA helicase II, 70 kDa subunit [Brugia malayi]
gi|158592869|gb|EDP31465.1| ATP-dependent DNA helicase II, 70 kDa subunit, putative [Brugia
malayi]
Length = 581
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 282/592 (47%), Gaps = 69/592 (11%)
Query: 3 LDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVS 62
+D DD F D DE + + K+ ++LVDASPKMF + ++D F A+
Sbjct: 2 IDEDDEFTDGDEFEELSASVLADGGKKCTIFLVDASPKMFEKYKSVDSESD-CSFRRALK 60
Query: 63 CIAQSLKTQIINRLYDEVAIC-FFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEF 121
+ + + + + E C NT+ K + ++ V+V ++++ +A IKE
Sbjct: 61 IVRLQMVNKAVTSAFGEYTCCILLNTQIKSH--SIDHVYVM-----QEIEEVSAERIKEL 113
Query: 122 DHIEES-------FEKEIGSQYGIVSGSRENSLYN-ALWVAQGLLRKGSSKTA---DKRI 170
D + +S K I S + + G + Y+ AL++ +++ +S+T + +
Sbjct: 114 DQLLKSGILLDSLAIKNILSAFKAIYGGHGHCDYSEALFLC---IKRMTSRTPYFRKRTV 170
Query: 171 LLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADM 230
LFTNE + FG A N + A D ++ + PL ++ F
Sbjct: 171 YLFTNEMNLFG-----ANNQHRVAACKNADDLRNHNTEFLIFPLITENDTFVF------- 218
Query: 231 IGLEGDDLALFMPSAGQK---LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
+ L F P + + +++ + K+ ++ R + ++F NGL + Y+L+
Sbjct: 219 -----NILEQFDPDVEKNFTNIGELEKDIPKKQYAHRNITGMNFEFGNGLKFSVGIYSLL 273
Query: 288 RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPA-------KRFQPYKGENIKFSV 340
L++ N + +RS+I + + + P KR GE + S
Sbjct: 274 HSEKIPQPAILNAEKNEIM--QRSYIYVNKESNEEIPILDKEIILKR--QIGGEVVDLST 329
Query: 341 QELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLR 400
E+ +++R++ + L GFKPLS LK H++R S FV+P +K+++GST ++ L+ +
Sbjct: 330 DEVEKLRRLTPPGMVLLGFKPLSCLKITHHVRSSQFVYPLEKDILGSTRMYRTLYEVCMN 389
Query: 401 LNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVE------PPGMHMIYLPYSDDIRPV 452
+ + Y +N P+LVALV Q + + E PG H+IYLP+++D R
Sbjct: 390 QRKMIICRYTQKTNVPPKLVALVPQASVAEDNSKDEFNSKFRYPGFHLIYLPFTEDKRDF 449
Query: 453 EE--LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEED 510
E H D D P AS ++++ A L+K++ F +F NP LQ+HY V++ALAL+ D
Sbjct: 450 SEQMTHPDGDW-PAASKEQIEVAKKLVKKLTSGYFPE-KFYNPVLQKHYKVIEALALDCD 507
Query: 511 DMPEIKDETVPD-EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRK 561
++ E++D+ P R V K ++EF+ + ++ + E K S+ ++K
Sbjct: 508 EIAEVQDQIQPYFAYNNFRKRVEKELDEFRSCLLSESCNSEQ--KCSKEAKK 557
>gi|431900035|gb|ELK07970.1| ATP-dependent DNA helicase 2 subunit 1 [Pteropus alecto]
Length = 547
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 160/576 (27%), Positives = 261/576 (45%), Gaps = 74/576 (12%)
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
A+ CI +II+ D +A+ F+ T K KN + ++V ++LD P A+ +
Sbjct: 33 ALECIKSVYTNKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVL-----QELDNPGAKRVL 87
Query: 120 EFDHIEESFEKEIGSQY--GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNED 177
E D F+ + G ++ ++ + SL LWV L K + KRI+LFTNED
Sbjct: 88 ELDR----FKGQQGKKHFQDMIGHGCDYSLNEVLWVCANLFSDVQFKMSHKRIMLFTNED 143
Query: 178 DPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGD 236
+P G+ +AK RT +A D +D GI ++L+ L F +S FY D+I + E +
Sbjct: 144 NPHGN--DSAKASRART---KAGDLRDTGIFLDLMHLK-KHGGFDISVFYRDIISIAEDE 197
Query: 237 DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAIT 296
D + + KLED+ ++ R KR + R+ + +++ + Y +++ +
Sbjct: 198 DFGVHFEESS-KLEDLLRKVLSRETKKRALSRLKLKLNKDIALTVGIYNMVQKALKPPPI 256
Query: 297 WLDSVTNHPLKTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLR 355
L TN P+KT+ +TG+ L+ KR Q Y I +E ++R
Sbjct: 257 KLYRETNEPVKTKTRTFNVNTGSLLLPSDTKRSQIYGSRQIVLEKEETELLRR------- 309
Query: 356 LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN- 414
F P GS+ +F AL L AV Y N
Sbjct: 310 --------------------FDEP------GSSTLFSALLTKCLEKEVMAVCRYTPRQNI 343
Query: 415 -PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKK 472
P VALV Q +E+ QV PPG +++LPY+DD R V T+ V A+ +++
Sbjct: 344 SPYFVALVPQEEELDEQKIQVTPPGFQLVFLPYADDKRKV----PFTEKV-MANREQIDS 398
Query: 473 AAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGV 531
A+++++ K + F NP LQ+H+ L+ALAL+ ++ D T+P + M R G
Sbjct: 399 MKAIVQKLRFK-YRSDSFENPVLQQHFRNLEALALDLMQPEQVVDLTLPKVKAMDERLGP 457
Query: 532 VKAVEEFKLSVYGDNYDEEGDV----KVSEASRKRKAATENAAKECANYDWADLADKGKL 587
+ V+ FK VY Y+ EG + + E S ++ E +E + +G L
Sbjct: 458 L--VDNFKELVYPPGYNPEGKIPKRKQDDEGSSSKRPKMELTKEELKAH-----VSQGTL 510
Query: 588 KEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
++TV LK + L RK+ L+ + H K
Sbjct: 511 GKLTVPMLKEACRVYGLKGGMRKQELLDTLSKHFQK 546
>gi|409077574|gb|EKM77939.1| hypothetical protein AGABI1DRAFT_121627 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 652
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 173/654 (26%), Positives = 297/654 (45%), Gaps = 77/654 (11%)
Query: 17 DNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDET-HFHIAVSCIAQSLKTQIINR 75
D F+ E K+ +++ +D S M + + +T H A+ Q K +II
Sbjct: 20 DTSFF---EGKKDVILFCIDCSESMLELREDSNREGIKTCHLFTALEAAMQIQKRKIIVG 76
Query: 76 LYDEVAICFFNTR-KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK---E 131
D V I +NT K N + + N + + + +A I+E H+ ++ + E
Sbjct: 77 PNDSVGILVYNTTFKSGNGRSSISELKQNTTVYQPVSQLSAPKIQELIHLLDAAREDPEE 136
Query: 132 IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
+ + V+G + ++ + +LR + KTA KRI L T+EDDP
Sbjct: 137 LRKAFPPVTG-KLVAMGDVFTSCNWVLRDQAPKTATKRIFLITDEDDPHSGPGSKQLITS 195
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLE-----GDDLALFMP 243
RTT++ D G+S+E ++ D+ F VS FY+ ++ L+ G+D +L
Sbjct: 196 ARTTLE---DLIQAGVSVEPFFINTEDKPFDVSKFYSQILLPTNLDAEEQLGEDPSLLPE 252
Query: 244 SAG-QKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
S ++ED+ Q+R KR + I F +A G I + Y L+ G + +
Sbjct: 253 SISISRVEDLLSQMRIHEAPKRSLFNIPFQLAEGFVIGVQGYGLVTEQKKGNYKYFADLG 312
Query: 303 NH---------------PLKTERSFICADTG-------------ALMQEPAKRFQPYKGE 334
+ E++ I G + + AKR G+
Sbjct: 313 DRMEVAIPRTAYVDEDRQADIEKAKIVYGVGQGKGDEEEEDDSLGVGIKTAKR-----GQ 367
Query: 335 NIKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
+S +E+ + + ++L GFK L+ N++ S F++P++ GS F A
Sbjct: 368 RPFYSAEEIRSFRTLGLEPGIKLLGFKDRDELRFEDNIKHSHFIYPNEMSYSGSRRTFSA 427
Query: 394 LHRSMLRLNR--FAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR- 450
L +SM+R N+ A+ S+P L+ Q+E G EPPGMH+I+LP++DDIR
Sbjct: 428 LLKSMIRKNKVGLALVLMRRNSSPVFSVLLPQEEQTDENGFTEPPGMHLIHLPFADDIRA 487
Query: 451 -PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALAL 507
P+E+ RASD A A + ++ +K+ + + NP+L H A LQA A
Sbjct: 488 APIEDAF-------RASDQLKDAARAWIDKLSVKNGTYPPDSYPNPALSYHNAQLQASAF 540
Query: 508 -EEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
EE D+ +D T P+ E + R G + ++E+KL++ D+ ++ V+ A KRKA
Sbjct: 541 REEFDVEAFEDMTEPNFEKIHKRAGNL--MKEWKLALLN---DKTANIGVATAGSKRKA- 594
Query: 566 TENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
+ A + ++ G L ++ V +LK +L A +GRK+ L++R+ T
Sbjct: 595 -DVATNDVDEAEFRSKYQAGTLGKLKVGQLKTFLSAKGQPVSGRKDELLARVAT 647
>gi|358058735|dbj|GAA95698.1| hypothetical protein E5Q_02355 [Mixia osmundae IAM 14324]
Length = 703
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 177/670 (26%), Positives = 300/670 (44%), Gaps = 92/670 (13%)
Query: 12 DDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQ 71
+++E+D EF + ++ VV+ +D + M P+ D+ A+ I +K +
Sbjct: 41 EEDEADLEF----KPNRDSVVFCIDLTSSMLHA--PSSDEP--CALTQALRAIYNLMKRK 92
Query: 72 IINRLYDEVAICFFNTRKKKNLQD-LNAVF--VFNVAEREQLDRPTARFIKE-FDHIEES 127
II D V I FN +K+ +++ + +++ V + + QLD P + +K+ F+ +E
Sbjct: 93 IIGSPADHVGILLFNAKKRSTIEEPVKSIYTDVVVLQDVGQLDAPAIKTLKKLFEDVEND 152
Query: 128 FEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF-GSIKGA 186
+ + + +SL L A+ +L + S K + KRI L T++DDPF S G
Sbjct: 153 PDYYSKTYKSTREAQQSSSLSRCLNAARQILAERSPKGSYKRIFLVTDDDDPFPSSAPGH 212
Query: 187 AKNDMTRTTMQRAKDAQDLGISIELLP-LSPPDEEFKVSHFYADMIGLEGDDLAL--FMP 243
A+ + T KDA ++G ELLP F V FYAD + + A+
Sbjct: 213 AQLRLACET--HLKDAAEMGY--ELLPCFIDTGSGFDVDKFYADPLSKYYPNEAIPDLAQ 268
Query: 244 SAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD--SV 301
S +LE ++ +R R KR+V I I+ N +I +N Y L T +D S
Sbjct: 269 SGIARLERLEAHMRVREAPKRVVFTIDLILFNDFAIGVNGYTLCAEEHKRPPTNIDGRSQ 328
Query: 302 TNHPLKTERSFICADTGALMQEPAKRFQ-------------------------------- 329
++ ++ DTG + +PA++ Q
Sbjct: 329 DGAEVQPRTNYTDIDTGRTITDPAEQLQHYYTLGTTMGRGSFAAAGTDDRDDGDYLEARA 388
Query: 330 ------PYKGENIKFSVQELSEIKRVSTG----HLRLHGFKPLSYLKDYHNLRPSTFVFP 379
P + + V EI RV T LR+ GFKP L H+ + F+FP
Sbjct: 389 DVSTSLPTRAPPQRKIVLTDDEIDRVRTCGMKPSLRMLGFKPRRELLPEHHRGHAYFIFP 448
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPP 436
+D +++GS F+AL RSM + + A + +N P + AL+ Q +++ G Q +P
Sbjct: 449 TDAKILGSKRTFLALIRSMCKKDVVGYACFMPRANSVPVIAALLPQLEQLDEYGRQSKPA 508
Query: 437 GMHMIYLPYSDDIRPVEELHSDTDAV--PRASDDEVKKAA-ALMKRIDLKDFSVCQFANP 493
GMH+I LPY+DDIR + L + A+ P A + AA +++++++K + F NP
Sbjct: 509 GMHVIQLPYADDIRSI-NLTATRQAIADPDAEEQPAIDAAFEIIRKMNIKAYFPDNFPNP 567
Query: 494 SLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDV 553
+L HY L A AL+E + PE+ D T+P + + S +G++ + +
Sbjct: 568 ALNHHYNCLAATALDE-EWPEVDDRTLPAYQVID-------------SRFGEHLKKLKRI 613
Query: 554 KVSEASRKRKAATENAAKECANYD-------WADLADKGKLKEMTVQELKLYLMAHNLST 606
+ A + AK YD D + GKL+++T +L +L ++ T
Sbjct: 614 VEEHPEALKPALVKPGAKRKLTYDEINKGQTIIDAYEGGKLQKLTKDQLIAFLEHYDQDT 673
Query: 607 TGRKETLISR 616
G K L+ R
Sbjct: 674 KGNKGPLLER 683
>gi|426198913|gb|EKV48838.1| hypothetical protein AGABI2DRAFT_217743 [Agaricus bisporus var.
bisporus H97]
Length = 652
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 173/654 (26%), Positives = 296/654 (45%), Gaps = 77/654 (11%)
Query: 17 DNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDET-HFHIAVSCIAQSLKTQIINR 75
D F+ E K+ +++ +D S M + + +T H A+ Q K +II
Sbjct: 20 DTSFF---EGKKDVILFCIDCSESMLELREDSNREGIKTCHLFTALEAAMQIQKRKIIVG 76
Query: 76 LYDEVAICFFNTR-KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK---E 131
D V I +NT K N + + N + + + +A I+E H+ ++ + E
Sbjct: 77 PNDSVGILVYNTTFKSGNGRSSISELKQNTTVYQPVSQLSAPKIQELIHLLDAAREDPEE 136
Query: 132 IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
+ + V+G + ++ + +LR + KTA KRI L T+EDDP
Sbjct: 137 LRKAFPPVTG-KLVAMGDVFTSCNWVLRDQAPKTATKRIFLITDEDDPHSGPGSKQLITS 195
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLE-----GDDLALFMP 243
RTT++ D G+S+E ++ D+ F VS FY+ ++ L+ G+D +L
Sbjct: 196 ARTTLE---DLIQAGVSVEPFFINTEDKPFDVSKFYSQILLPTNLDAEEQLGEDPSLLPE 252
Query: 244 SAG-QKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
S ++ED+ Q+R KR + I F +A G I + Y L+ G + +
Sbjct: 253 SISISRVEDLLSQMRIHEAPKRSLFNIPFQLAEGFVIGVQGYGLVTEQKKGNYKYFADLG 312
Query: 303 NH---------------PLKTERSFICADTG-------------ALMQEPAKRFQPYKGE 334
+ E++ I G + + AKR G+
Sbjct: 313 DRMEVAIPRTAYVDEDRQADIEKAKIVYGVGQGKGDEEEEDDSLGVGIKTAKR-----GQ 367
Query: 335 NIKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
+S +E+ + + ++L GFK L+ N++ S F++P++ GS F A
Sbjct: 368 RPFYSAEEIRSFRTLGLEPGIKLLGFKDRDELRFEDNIKHSHFIYPNEMSYSGSRRTFSA 427
Query: 394 LHRSMLRLNR--FAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR- 450
L +SM+R N+ A+ S+P L+ Q+E G EPPGMH+I+LP++DDIR
Sbjct: 428 LLKSMIRKNKVGLALVLMRRNSSPVFSVLLPQEEQTDENGFTEPPGMHLIHLPFADDIRA 487
Query: 451 -PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALAL 507
P+E+ RASD A A + ++ +K+ + + NP+L H A LQA A
Sbjct: 488 APIEDAF-------RASDQLKDAARAWIDKLSVKNGTYPPDSYPNPALSYHNAQLQASAF 540
Query: 508 -EEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
EE D+ +D T P+ E + R G + ++E+KL++ D ++ V+ A KRKA
Sbjct: 541 REEFDVEAFEDMTEPNFEKIHKRAGNL--MKEWKLALLNDKI---ANIGVATAGSKRKA- 594
Query: 566 TENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
+ A + ++ G L ++ V +LK +L A +GRK+ L++R+ T
Sbjct: 595 -DVATNDVDEAEFRSKYQAGTLGKLKVGQLKTFLSAKGQPVSGRKDELLARVAT 647
>gi|345560253|gb|EGX43378.1| hypothetical protein AOL_s00215g114 [Arthrobotrys oligospora ATCC
24927]
Length = 644
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 156/606 (25%), Positives = 274/606 (45%), Gaps = 83/606 (13%)
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIK 119
A+ C LK +II+ D + I F T + K + + + N LD P A IK
Sbjct: 75 ALRCAEAILKNRIISTPNDMMGILLFGTEQTKYGEGSSNISYPNCYLLMDLDIPDAPSIK 134
Query: 120 EFDHIEESFEK--EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNED 177
E ++ ++ ++ EI + + S+ N L+ A L ++ +R+ + T+ D
Sbjct: 135 ELKYLLDNPDELSEI-----LKPSKKPASMANVLFAANHLFTTKAANFNSRRLFIITDND 189
Query: 178 DPFGSIKGAAKNDMTRTTMQ-RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD 236
+P + R + Q RA+D DLG+ IE +S P +F + FY D++ G+
Sbjct: 190 NP-------ETDKSARASAQTRARDLYDLGVRIEPFFVSSPTHQFDKTLFYTDIMYDTGE 242
Query: 237 DLALFMPSAGQ---------KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
D +P A + + E M + + +R + + I G I + Y L
Sbjct: 243 DTTENLPDAEEVAKATDAESRYEQMLSAITAKQAPRRALFTLKMEIGKGFVIGIKGYLLH 302
Query: 288 RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQP--------YKGENIKFS 339
+ P ++ H + + T + +E A+ P + GE + FS
Sbjct: 303 KRVTPSRSHYI-----HEQGEKLQIVKGTTTRMDEETAQEVTPDQIRKAYKFGGETVSFS 357
Query: 340 VQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSML 399
+E +I+ LR+ GFKP + L+ +HN+R STF++PS+++ GST F AL +L
Sbjct: 358 DEEFKKIRNFGDPVLRILGFKPQTELQFWHNMRSSTFIYPSEEDYTGSTRTFAALRNKLL 417
Query: 400 RLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHS 457
+ +A++ N P + A++ + EP GM +I LP+ DDIR E
Sbjct: 418 KDKLMGIAWFIARRNAAPVMAAIIPSE---------EPQGMFIIPLPFVDDIRQNPE--- 465
Query: 458 DTDAVPR--ASDDEVKKAAALMKRIDL-KDFSVCQFANPSLQRHYAVLQALALEEDDMPE 514
VP A + + + +++++ + K + ++ NP+LQ+HY VL+A+ALEE+ E
Sbjct: 466 ----VPHVVAPNYLIDRMQDIIRQLHMPKGYIPEKYPNPALQKHYKVLEAIALEEELPEE 521
Query: 515 IKDETVPDEEGMAR----------PGVVKAVEEFKLS------VYGDNYDEE--GDVKVS 556
+D+T P + + + + +A+ EF+L+ ++G E G
Sbjct: 522 FEDKTEPKYKNIEKHAGQYIQDWGDALSQAMAEFRLTKPAQVEIHGTKRGREPAGAAAAK 581
Query: 557 EASRKRKAATENAAKEC-ANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLIS 615
+ + + +A KE A Y DK L ++TV LK +L + +S G+K L+
Sbjct: 582 KVKKDVDSGPGDADKEMRAAY------DKNTLSKLTVAVLKDWLNSKGMSVAGKKADLVE 635
Query: 616 RILTHM 621
RI H
Sbjct: 636 RIEEHF 641
>gi|70998276|ref|XP_753862.1| DSB repair complex subunit Ku70 [Aspergillus fumigatus Af293]
gi|66851498|gb|EAL91824.1| DSB repair complex subunit Ku70, putative [Aspergillus fumigatus
Af293]
Length = 691
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 165/687 (24%), Positives = 311/687 (45%), Gaps = 111/687 (16%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAED---QTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++A ++ V++ ++ S M T P+ D + +E+ A+ C ++ +II+ D +
Sbjct: 24 YKAVRDAVLFAIEVSDSML-TPRPSSDPKKRVEESPTTAALKCAYYLMQQRIISNPRDMI 82
Query: 81 AICFFNTRKKKNL-QDLNA--------VFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ + T+ + +D N+ ++F LD P+AR +KE + E +
Sbjct: 83 GVLLYGTQASRFYDEDENSRGDLSYPHCYLFT-----DLDVPSAREVKELRALAE----D 133
Query: 132 IGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
G ++ S+E S+ N L+ A + + +R+ + T+ D+P G +++
Sbjct: 134 EGKARDVLVPSKERVSMANVLFCANQIFTSKAPNFLSRRLFIVTDNDNPHGD----SRSQ 189
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----------GLEGDDLAL 240
+ T+ RAKD DLG++IEL P+S P+ EF S FY D+I + D +
Sbjct: 190 RSAATV-RAKDLYDLGVTIELFPISQPEHEFDSSKFYDDIIYKTSPTDAEAPVYLKDDSK 248
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG-- 293
++G + + + L + S+ + +R F + I + Y L + P
Sbjct: 249 VSTASGDGIS-LLNGLLSSINSRSVPRRAHFSNMPLELGPNFKISVTGYLLFKRQAPARS 307
Query: 294 AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGEN--IKFSVQELSEIKRVST 351
WL +K + I DT +++ R + YK N + F+ +E ++
Sbjct: 308 CYVWLGGEKPQIVKGVTTQIADDTARTVEKSEIR-KAYKFGNDQVSFTPEEQKALRHFGD 366
Query: 352 GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN 411
+R+ GFKPLS L + N++ F++PS+++ VGST +F ALH+ +L+ ++ A+ ++
Sbjct: 367 PVIRIIGFKPLSALPFWANVKHPFFIYPSEEDYVGSTRVFSALHQKLLKDHKMALVWFIP 426
Query: 412 PSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDD 468
N P L A++A +E V Q PPGM +I LPY+DD+R + + + P D
Sbjct: 427 RKNAAPVLGAMIAGEEKVDENDVQKFPPGMWIITLPYADDVR--QNPETTLNVAPEPLID 484
Query: 469 EVKKAAALMKRIDL--KDFSVCQFANP------------------SLQRHYAVLQALALE 508
+++ +++++ L + ++ NP +LQ HY +LQALAL+
Sbjct: 485 QMR---TIVQQLQLPKASYEPQKYPNPCKLGKFNLLTSNADLLPAALQWHYRILQALALD 541
Query: 509 EDDMPEIKDETVPDEEGM-ARPG--VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
ED + +D+T+P + R G V+ +E + V +++ R A
Sbjct: 542 EDLPEKPEDKTIPKYRQIDKRAGDYVLSWADELEKQYAASATHGTKSTLVKRSAKDRAAD 601
Query: 566 TENAAKECA-------------------------------NYDWADLADKGKLKEMTVQE 594
++ A+ + + D ++ ++ + ++TV
Sbjct: 602 SDEASSHPSKRIKSESGPEGVDAEVRLHYEKGSLSKVSRLHADCLNVTNQSYVIQLTVAV 661
Query: 595 LKLYLMAHNLSTTGRKETLISRILTHM 621
LK +L AH ST G+K LI R+ +M
Sbjct: 662 LKDFLTAHGRSTAGKKADLIERVEEYM 688
>gi|380485661|emb|CCF39216.1| ATP-dependent DNA helicase II [Colletotrichum higginsianum]
Length = 498
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 238/507 (46%), Gaps = 53/507 (10%)
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
+ N + A + ++ +R+ + T+ D+P G+ K D RAKD DLG
Sbjct: 1 MANVFFCANQIFTTKAANFGSRRLFIITDNDNPHGNNK-----DAKSAAAVRAKDLYDLG 55
Query: 207 ISIELLPLSPPDEEFKVSHFYADMI--------------GLEGDDLALFMPSAGQKLEDM 252
+ IEL P++ DE+F + FY D+I GD L L L +
Sbjct: 56 VVIELFPITREDEKFNLGKFYDDIIYRDQTAEALSEVRNSKSGDGLTL--------LNSL 107
Query: 253 KDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTE 309
+ + +KR + + F IA GL I + Y +I P + +LD E
Sbjct: 108 ISNINSKETTKRALFSNLPFEIAPGLRISVKGYNVIHRQTPARTSYIYLDGEKPQLAIGE 167
Query: 310 RSFICADTGALMQEPA-KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDY 368
+ I D+ +++ K+ + GE + F+ +E +K T +R+ GFKP S L +
Sbjct: 168 TTRIAEDSARTVEKTEFKKAYKFGGEYVHFAPEEQKSLKDFGTPIIRIIGFKPRSMLPFW 227
Query: 369 HNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEI 426
++ STF+FPS+++ VGST +F AL + +L+ + +A+ +N P LVA++ E
Sbjct: 228 ACVKKSTFIFPSEEDYVGSTRVFSALWQKLLKDQKVGIAWAITRANASPILVAIIPSHEK 287
Query: 427 VR--AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD 484
+G P G+ + LP++DD+R E S+ + +S++ + + +++++ L
Sbjct: 288 SEDDSGTPYLPAGLWLYPLPFADDLREGPEPPSN---LVVSSNELIDRMRVIVQQLQLPK 344
Query: 485 --FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR--PGVVKAVEEFKL 540
F+ ++ NPSLQ HY +LQ LALEE+ + +D T P + +++ G + E L
Sbjct: 345 AMFNPKKYPNPSLQWHYKILQVLALEEEYPEKAEDLTEPKYKAISKRAGGYLDEWAEV-L 403
Query: 541 SVYGDNYDEEGDVK-------VSEASRKRKAATENAAKECANYDWADLA---DKGKLKEM 590
V N + +K +++ KAA + A L D G L +M
Sbjct: 404 QVETKNALAKAAIKRDIDDDDDERPAKRVKAAPRSVKVSGLGLTTAQLKAAIDGGGLSKM 463
Query: 591 TVQELKLYLMAHNLSTTGRKETLISRI 617
V +LK L A STTG+K LI R+
Sbjct: 464 LVADLKDILAARGQSTTGKKTDLIERV 490
>gi|340517647|gb|EGR47890.1| hypothetical protein TRIREDRAFT_63200 [Trichoderma reesei QM6a]
Length = 649
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 165/637 (25%), Positives = 287/637 (45%), Gaps = 72/637 (11%)
Query: 25 EATKEYVVYLVDASPKMFST--TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAI 82
+A K+ ++ ++ SP M + ++ A+ C ++ +II+ D + I
Sbjct: 33 KAQKDAILLAIEVSPSMLEPPPVSSSRKADRDSPVQAALKCARHLMEQRIISNPKDMMGI 92
Query: 83 CFFNTRKKKNLQD--LNAVFVFNVAEREQLDRPTARFIKEFDHI-EESFEKEIGSQYGIV 139
F T K K D + + N LD P A +K + E+ E E+
Sbjct: 93 LLFGTEKTKFRDDNGRSGLGYPNCYLFMDLDIPAAEDVKALKALTEDEDEDEVLKP---- 148
Query: 140 SGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+ + S+ N L+ A + ++ +R+ + T+ DDP S K A RA
Sbjct: 149 ATTDTVSMSNVLFCANQIFTTKAANFGSRRLFIVTDNDDPHASDKAARS-----AAAVRA 203
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMI---------------GLEGDDLALFMPS 244
KD DLGI+I+L P++ D +F +S FY D++ GD L+L
Sbjct: 204 KDLYDLGITIDLFPITTGDSKFDLSKFYDDIVYRDPNAEANRTEVRASKSGDGLSL---- 259
Query: 245 AGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPG--AITWLDSVT 302
L + + + KR + + F IA GL I + Y ++ P WL+
Sbjct: 260 ----LNSLISNINSKQTPKRALFHLPFEIAPGLKITVKGYNIVHRQTPARTCYIWLEGEK 315
Query: 303 NHPLKTERSFICADTGALMQ-EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKP 361
E + + D+ ++ + K+ + GE + F+ +E +++ +R+ GFK
Sbjct: 316 AQIATGETTRVAEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKKLRDFGAPTIRIIGFKK 375
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVA 419
S + + +++ STF+FPS+++ +GST +F AL + +L+ ++ +A+ SN P A
Sbjct: 376 RSMIPVWASVKKSTFIFPSEEDYIGSTRVFSALWQKLLKDDKIGLAWCVLRSNAQPMFAA 435
Query: 420 LVAQDEIVR--AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALM 477
L+ E AG P G+ + LP +DD+R + + D S+D K ++
Sbjct: 436 LIPSREQSEDDAGTPYLPAGLWLYPLPTADDLRDI-NVERKLD----CSEDLKTKMRVIV 490
Query: 478 KRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAV 535
++++L ++ ++ NP+LQ HY +LQ LALEE+ E +D T P + +++ V +
Sbjct: 491 QQLNLPKGIYNPLKYPNPALQWHYKILQTLALEEEMPEEPEDLTEPKNKAISK-RVGGYL 549
Query: 536 EEFKLSVYGDNYDEEGDVKVSEASRKRKA---ATENAAKE---------CANYDWADLAD 583
EE + + +E D S KR+ A E AK+ +N A L D
Sbjct: 550 EE-----WSETLKDEADRATRSRSLKREIEDDAPERPAKQRKVAGERPSGSNLSMAQLRD 604
Query: 584 ---KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G + +MTV +LK A LST G+K L+ RI
Sbjct: 605 AIESGSISKMTVAQLKDVAGARGLSTGGKKADLLERI 641
>gi|119182187|ref|XP_001242242.1| hypothetical protein CIMG_06138 [Coccidioides immitis RS]
Length = 613
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 247/528 (46%), Gaps = 47/528 (8%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCP---AEDQTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
+++ K+ V++ ++ S M T P ++ E+ A+ C ++ +II+ D +
Sbjct: 24 YKSVKDAVLFAIEVSESML-TAAPNPTSKKARPESPATAALKCAYHLMQQRIISNPKDMI 82
Query: 81 AICFFNTRKKKNLQD---------LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE 131
+ + T K D ++F LD P A +KE + E E
Sbjct: 83 GVLLYGTESSKFYDDDEDGRGSLPYPHCYLFT-----DLDVPAASDVKELHAL---VEDE 134
Query: 132 IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
+ +V S+ N L+ A + + + +R+ + T+ D+P K +
Sbjct: 135 DRAAEILVPSKEPVSMANVLFCANQIFTTKAPNFSSRRLFIVTDNDNPHSKDKV-----L 189
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI------GLEGDDLALF-MPS 244
RAKD DLG+ IEL P+S PD +F S FY DMI E + + +
Sbjct: 190 KSAATVRAKDLYDLGVVIELFPISTPDHDFDTSKFYDDMIYRASPTDPEAPNYSCTSTKT 249
Query: 245 AGQKLEDMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG--AITW 297
+G + + L + SK + +R F + I ++ + + + P W
Sbjct: 250 SGADGISILNSLLSSINSKSVPRRALFSNLPLELGPEFRISVSGFLIFKRQAPARSCYVW 309
Query: 298 LDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
L +K + + D+ +++ ++ + GE++ F+ +E S ++ +R+
Sbjct: 310 LGGEQPQIVKGVTTLVADDSAREVEKWEIRKAYKFGGEHVAFTQEEQSALRNFGDPVIRI 369
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GFKP+S L + + + STF++PS+ VGST +F AL +++L+ +FA+ ++ N
Sbjct: 370 IGFKPMSSLPIWASTKHSTFIYPSEAGFVGSTRVFSALQQTLLKQKKFALVWFVARKNAA 429
Query: 415 PRLVALVAQDEIVRAG-GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P + AL+ +E + QV PPGM + LP++DDIR E H+ P D++++
Sbjct: 430 PVMAALIPGEEKLDDNDAQVIPPGMWIQPLPFADDIRQNPETHNIV--APEPLIDKMREI 487
Query: 474 AALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
+++ + + ++ NPSLQ HY +LQALAL+ED + +D+T+P
Sbjct: 488 IQVLQ-LPKGRYDPQRYPNPSLQWHYRILQALALDEDLPDQAEDKTIP 534
>gi|406861114|gb|EKD14170.1| putative ATP-dependent DNA helicase II subunit 1 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 657
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 167/644 (25%), Positives = 299/644 (46%), Gaps = 69/644 (10%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVA 81
+ + + +++ ++ S M + ++D+ E + A+ C Q + +II+ D +
Sbjct: 25 YTTSNDAILFAIEVSSSMLAIPPESDDKKAEKDSPALAAIKCAYQIMTQRIISSPKDMMG 84
Query: 82 ICFFNTRKKKNLQDLNAVFVFNVAE-----REQLDRPTARFIKEFDHIEESFEKEIGSQY 136
+ F T+K K Q+ N+ N+ L P+A +K+ I + + +
Sbjct: 85 VLLFGTKKSK-FQEDNSHSRGNITYPHCYLLSDLGIPSAEDVKQLRAISDGTD----NAA 139
Query: 137 GIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
GI++ S E S+ N L+ A + + +R+ + T++D+P + K A ++ T
Sbjct: 140 GILAPSEEPVSMANMLFCANQIFTTKAPNFGSRRLFIITDQDEPHATDKLA----RSQAT 195
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLALF---MPSAGQKL 249
+ RAKD DLG++IEL P+S PD EF S FY D+I +G DL L + S+G +
Sbjct: 196 V-RAKDLYDLGVTIELFPISHPDHEFDRSKFYDDIIYRDPADGGDLPLAQTKLKSSGGGI 254
Query: 250 EDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNH 304
+ L + SK++ KR + F I GL+I + Y L++ P ++
Sbjct: 255 SLLMS-LISDINSKQVAKRALFSGLPFEIGPGLTISVKGYNLLQKQKPARSCYIYE-KGE 312
Query: 305 PLKTERSF---ICADTGALMQEP-AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFK 360
L+ + ADT ++ K+ + G + F+ +E +IK + LR+ GFK
Sbjct: 313 ELQMAVGVSEQVNADTSRRIESSEIKKAYRFGGTQVLFTAEEQLKIKFFESPVLRIIGFK 372
Query: 361 PLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLV 418
P S L + +++ +TF++PS+ GST F AL + +L+ +A++ N P +V
Sbjct: 373 PQSMLPIWASVQKATFIYPSEDGYTGSTRTFAALWQKLLKDKIMGLAWFIARKNAKPLIV 432
Query: 419 ALVAQDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVP-RASDDEVKKAAA 475
A++ E + G QV P G+ + LP++DDIR + T A P A D+ V +
Sbjct: 433 AILPSAERIDETTGAQVVPQGLWLYPLPFADDIR-----ENPTKAKPFDAPDNLVDEMRK 487
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQAL----ALEEDDMPEIKDETVPD------- 522
++K++ L + +++NP LQ Y LQ + DD P + D T+P
Sbjct: 488 VVKQLQLPKAIYDPTKYSNPQLQTFYKWLQIIALDDDAPPDDEPLVNDTTIPKYRQINKR 547
Query: 523 -EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE--------ASRKRKAATENAAKEC 573
E + G+ A+ E+ + +Y + G ++ A RKR +
Sbjct: 548 AGEYIQNWGL--ALAEYATAYTKTHYGDVGGTRLKRGSDDDGDGAGRKRIKTEKTGLDGL 605
Query: 574 ANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+N + G L + T+ ELK ++ LS+ G+K L+ R+
Sbjct: 606 SNAQLKVVIGSGGLGKYTIPELKDFMHTKGLSSAGKKADLVERV 649
>gi|146182742|ref|XP_001025145.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila]
gi|146143715|gb|EAS04900.2| ATP-dependent DNA helicase ii, 70 kDa subunit (ku70) [Tetrahymena
thermophila SB210]
Length = 727
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 267/572 (46%), Gaps = 53/572 (9%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA 60
+EL+P D F++++ E D K+ V+++V+ S +F E + + + I
Sbjct: 13 VELNPLD-FQEEEVEQD------IITLKDAVLFVVEMSQNLFIPYGDGEKK--QIQYQIV 63
Query: 61 VSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDL-NAVFVFNVAEREQLDRPTARFIK 119
+ + LKT+II D + + F+NT + N+Q N + N L P+A+ I
Sbjct: 64 MKSLEIFLKTKIICSPTDMIGLLFYNT-DQSNIQSFPNQYLLLN------LQNPSAQSI- 115
Query: 120 EFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDP 179
+F + ++ E+ G Q + L + LW + KR+ LFT+ D+P
Sbjct: 116 QFVKMLQTKEQMNGYQKMKIKNV---CLKDLLWNINKQFLNLKNGQYSKRVFLFTSNDEP 172
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS---PPDEEFKVSHFYADMIGLEGD 236
+ A KN ++ A++ + ++IEL PL P E F V FY+ +I +
Sbjct: 173 DKNNIEAQKNAISY-----AQNLLENDVNIELFPLKKLVPEAEHFNVRKFYSCIINFDLS 227
Query: 237 DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAIT 296
++ + K+ +++ ++R ++F KR + RI + + NG+++ + Y+L
Sbjct: 228 EINEYSIDETSKIYNLQSRIRAKLFKKRNISRIYWQLGNGVNVGVKVYSLFNKITRPKYK 287
Query: 297 WLDSVTNHPLKTERSFICADTGALM--QEPAK-------RFQPYKGENIKFSVQ--ELSE 345
+ P+ + C ++G + QE K + +P K + IK + EL +
Sbjct: 288 QYTKDDSKPVSKFTRYFCKESGKELRPQEIGKCLHLLNKKGKP-KDDYIKVRIDKDELQQ 346
Query: 346 IKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFA 405
IK + ++L GFK S+LK Y NL+PS F++P + V GS+ +F AL + M++ + A
Sbjct: 347 IKNLEEVGMKLIGFKDKSFLKVYFNLKPSLFIYPDNSLVKGSSQLFDALIKKMIQKEKVA 406
Query: 406 VAFYGN--PSNPRLVALVAQDEIVRAGGQVE-PPGMHMIYLPYSDDIRPVEELHSDTDAV 462
+ N R L+ Q E V+ PPG H+I LPY +I + +
Sbjct: 407 IVKIINRKGGQLRFGCLLPQLEEYSPVDHVQIPPGFHLITLPYCGEINHLPKFVKPGPT- 465
Query: 463 PRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
+ S + + LM +++++F F NPS Y+VL+A+AL+E+ +I+D D
Sbjct: 466 -KISQEMILVTKLLMNLLEIQEFDFRNFENPSNSHFYSVLEAIALKEEKPQQIEDLMEVD 524
Query: 523 EEGMARPGVVKAVEEFKLSVYGDNYDEEGDVK 554
E + + V + +YGD D E K
Sbjct: 525 TERINKFKEV-------IDLYGDCLDAESTTK 549
>gi|346977166|gb|EGY20618.1| Ku70 [Verticillium dahliae VdLs.17]
Length = 646
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 171/647 (26%), Positives = 296/647 (45%), Gaps = 44/647 (6%)
Query: 4 DPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMF----STTCPAEDQTDETHFHI 59
D DD R++DEE+D E ++++ + ++ +D S M ++T D+ ++
Sbjct: 3 DRDDYKREEDEEADEEVENDYKSQNDAIILAIDVSDTMLEQPPASTSRKADK--DSAVQA 60
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKK--NLQDLNAVFVFNVAEREQLDRPTARF 117
A+ C Q ++ +II D + I FF T K K + + + LD P A
Sbjct: 61 ALKCAYQLMQQRIIASPKDMMGILFFGTEKSKFQEHSGRSGLGYPHCYLHTDLDIPAAED 120
Query: 118 IKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNED 177
+K + E E E G I S + + + N + A + ++ + +R+ + T+ D
Sbjct: 121 VKALKALVEDEEDEEGVL--IPSSTEKVQMANVFFCANQIFTTKAANYSSRRLFILTDND 178
Query: 178 DPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDD 237
P S RAKD DLG++IEL P++ D EF ++ FY D+I +
Sbjct: 179 SPHPS-----DKAAKSAAAVRAKDLYDLGVNIELFPITRGDNEFDLAKFYDDIIYRDASA 233
Query: 238 LALFMPSAGQKLED---MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRP 289
A K D + + L + SK++ KR F IA GL I + Y ++
Sbjct: 234 EANHSEVRCSKTADGLSLLNSLISNINSKQVAKRALFSSVPLEIAPGLRISIKGYNILHR 293
Query: 290 TVPG--AITWLDSVTNHPLKTERSFICADTGALMQEP-AKRFQPYKGENIKFSVQELSEI 346
P WL+ + E + I DT +++ K+ + GE I FS ++
Sbjct: 294 QEPARSCYVWLEGEKPQIVAGETTRISEDTARTVEKSETKKAYKFGGEYIYFSPEDQKRA 353
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
K +R+ GFK + + + +++ STF+FPS+++ VGST +F AL + +L+ N+ A+
Sbjct: 354 KDFGPPIIRIIGFKTRAQIPFWASVKKSTFIFPSEEDFVGSTRVFSALWQKLLKSNKVAI 413
Query: 407 AFYGNPSN--PRLVALVAQDEIVRAGGQVE--PPGMHMIYLPYSDDIRPVEELHSDTDAV 462
A+ +N P L A++ E P G+ + LP++DD+R +D
Sbjct: 414 AWCIIRANATPVLSAIIPSHESTEESNATPFLPAGLWLCPLPFADDLRGGPA--TDGTEP 471
Query: 463 PRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
PRAS++ V + +++++ L ++ ++ NP LQ HY +LQALALEE+ +D T+
Sbjct: 472 PRASNELVDQMRVIVQQLQLPKAMYNPMRYPNPGLQWHYKILQALALEEEVPEVPEDLTL 531
Query: 521 PDEE-------GMARPGVVKAVEEFKLSVYGDNYDEEGD---VKVSEASRKRKAATENAA 570
P + G + EE + + E D V A + + ++T+ +A
Sbjct: 532 PKHKAINKRSGGYLQDWAETLQEETQKTAKTTKTKREADDDADDVKPAKKAKASSTKPSA 591
Query: 571 KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ A G L +M V +LK L LS +G+K L+ R+
Sbjct: 592 SGMTDAQVRAAASAGSLTKMVVADLKDLLAMKGLSISGKKADLVERL 638
>gi|444725516|gb|ELW66080.1| X-ray repair cross-complementing protein 6 [Tupaia chinensis]
Length = 443
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 219/486 (45%), Gaps = 63/486 (12%)
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
S LWV L K + KRI+LFTNEDDP + G+ K RT A D D
Sbjct: 8 SFSEVLWVCANLFSDVQVKMSHKRIMLFTNEDDPHRN--GSVKASRART---EASDLHDT 62
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
GI +EL+ L P F +S FY +I + E +DL + + KLED+ +RK+ F
Sbjct: 63 GIFLELMHLKKPGG-FDISLFYRGIISVAEDEDLRVHL-EVSSKLEDL---MRKKAFKSS 117
Query: 265 IVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALM-QE 323
++ L TN P+K + +TG+L+
Sbjct: 118 AIR------------------------------LYRETNEPVKVKTRIFSINTGSLLLPN 147
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
KR Q Y I +E+ +K L L FKPL L +H L S FV+P +
Sbjct: 148 DTKRSQIYGNRQILLEKEEIEGLKWFDEPGLILFSFKPLIMLIKHHYLWSSMFVYPEETL 207
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHM 440
V GS+ +F AL L AV Y N P VALV Q +E+ QV PPG +
Sbjct: 208 VNGSSTLFSALLSKCLEKEVVAVCRYTPRKNTPPYFVALVPQEEELDDLKIQVTPPGFQL 267
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
YLPY+DD +L +AS ++V K A+++++ K + F NP LQ+H+
Sbjct: 268 FYLPYADD-----KLKVPITEKVKASPEQVDKMKAIIQKLRFK-YRSDDFENPVLQQHFR 321
Query: 501 VLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDV----KV 555
L+ALAL+ ++ D T P E M R G + V EFK VY +Y + ++ +
Sbjct: 322 NLEALALDLTKPEQVVDLTSPKVEEMDKRLGSL--VGEFKELVYPPDYTPDRNITKRKQD 379
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLIS 615
E S +++ E + +E + KG L ++TV LK + L + +K+ L+
Sbjct: 380 DEGSGNKRSKVEFSEEELKAH-----VSKGMLGKLTVPVLKEACRVYRLKSGMKKQELME 434
Query: 616 RILTHM 621
+ H
Sbjct: 435 VLTQHF 440
>gi|389749569|gb|EIM90740.1| Ku DNA-binding complex Ku70 subunit [Stereum hirsutum FP-91666 SS1]
Length = 648
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 166/645 (25%), Positives = 280/645 (43%), Gaps = 79/645 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDE----THFHIAVSCIAQSLKTQIINRLYDE 79
+E ++ +++ +D S M P ED E H A+ + K ++I D
Sbjct: 25 YETKRDVILFCIDCSESMLE---PYEDPQYEDQQTCHLLTALEVAVEIQKKKVIVGPSDS 81
Query: 80 VAICFFNTRKKKNL---QDLN-AVFVFNVAEREQLDR--PTARFIKEFDHIEESFEKEIG 133
V I F+NT ++ + D+ FV+ E +R R I + E KE
Sbjct: 82 VGIMFYNTTRRNDTGQSTDIKKGTFVYQPIESIGAERVLKLTRLIADAREDPELLRKEYP 141
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
S ++ + +LR G+ KTA KRI + TN DDP + R
Sbjct: 142 PM-----TSDHVAIGDVFTSCNWVLRDGAPKTASKRIFVITNNDDPHPGVGAEKLVVSAR 196
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQ------ 247
TT+ D GI +E +S D F + F+A+++ + D + +
Sbjct: 197 TTLI---DLVQAGIMVEPFFISDEDTPFNPTKFWANVLLSDLDSPSSSSSNPSILPESIS 253
Query: 248 --KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGA----------- 294
+++D+ +Q+R KR + I F +A+G +I + Y L+ GA
Sbjct: 254 ITRIDDLLEQMRFHEVPKRALFSIPFQLADGFTIGIKGYGLVTEQRKGAYRYFVDLGDRM 313
Query: 295 ------ITWLDSVTNHPLKTERSFICADTGALMQE----PAKRFQPYKGENIKFSVQELS 344
++D+ + P + G + P R P + ++ +E+
Sbjct: 314 EVVEPKTLYVDNESQRPTDKKEQLYGMTLGVSADDDGTHPGTRVVP-PNTRVFYTAEEIK 372
Query: 345 EIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNR 403
+ + + ++L GFK L N++ S F++P + GS AL +SM + ++
Sbjct: 373 KFRSLGLEPSIKLLGFKDKDQLLFEDNIKHSYFIYPDEMAYTGSKRTVSALIKSMAKKDK 432
Query: 404 FAV--AFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDT 459
+ A + S+P A++AQ E + AGG EP G H+I LP++DDIR P+EE
Sbjct: 433 IGLVLALFRRGSSPIFCAMLAQKEKIEAGGWREPGGFHLIPLPFADDIRAAPIEEGFIAP 492
Query: 460 DAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPE-IKDE 518
+ R ++ V K + D K +S + NP+LQ H+ LQA A E+ PE D
Sbjct: 493 KELSRLAETFVLKCSLK----DKKGYSPDTYPNPALQFHHEQLQATAFREEYDPETFVDL 548
Query: 519 TVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAAT------ENAAKE 572
T+P E M R + + E+K ++ DE + V KRKAA EN ++
Sbjct: 549 TLPKYE-MFRKRAAQPIREWKEAL---EQDESANATVITTGSKRKAAAVVGPVDENEIRK 604
Query: 573 CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+W + G+L+++ V ++K +L A L +G+K L+SRI
Sbjct: 605 ----EW----EAGRLEKLKVDQMKEFLRAKGLPVSGKKADLMSRI 641
>gi|116196230|ref|XP_001223927.1| hypothetical protein CHGG_04713 [Chaetomium globosum CBS 148.51]
gi|121783138|sp|Q2H0I3.1|KU70_CHAGB RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|88180626|gb|EAQ88094.1| hypothetical protein CHGG_04713 [Chaetomium globosum CBS 148.51]
Length = 622
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 169/656 (25%), Positives = 284/656 (43%), Gaps = 81/656 (12%)
Query: 1 MELDPDDVFRDDDEESDNEFYQ-EHEATKEYVVYLVDASPKMFSTTCPAEDQT---DETH 56
M DD R D +E + E + +++ K+ V++ +D S M PA D+ ++
Sbjct: 1 MAWGGDDDRRPDADEGEEELDETDYKTQKDAVLFAIDVSSSMLQQP-PATDKKRADKDSA 59
Query: 57 FHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA-------VFVFNVAEREQ 109
A+ C Q ++ +II + D + I F T K + ++ ++F
Sbjct: 60 IAAALKCAYQFMQQRIIAQPKDMMGILLFGTEKSRFRDEVGGRSSGYPHCYLFT-----D 114
Query: 110 LDRPTARFIKEFDHIEESFEK--EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTAD 167
LD P A +K + E E E+ +V S+ N L+ A + ++
Sbjct: 115 LDVPAAEDVKSLKALVEEGEDPDEV-----LVPAKEPASMANVLFCANQVFTTNAANFGS 169
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFY 227
+R+ + T+ D P G RAKD DLG+ IEL P+S + F VS FY
Sbjct: 170 RRLFIITDNDAPHGK-----DKAAKSAAAVRAKDLYDLGVVIELFPVSHEGKAFDVSKFY 224
Query: 228 ADMI----GLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLS 278
D+I E + +G L + + L + SK+ KR + F +A ++
Sbjct: 225 DDIIYRDPATEAISDEVKTSKSGDGLS-LLNSLISNINSKQTPKRAYFSNLHFELAPNVT 283
Query: 279 IELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENI 336
I + Y + P WL ++E + + T + + K+ + GE I
Sbjct: 284 ISVKGYMPLHRQQPARTCYVWLGGEQAQLAQSETIKVDSATRTVDKSEVKKAYKFGGEYI 343
Query: 337 KFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHR 396
F +E + +K + LR+ GFKP S L + +++ S F+FPS++ VGST
Sbjct: 344 HFKPEEAASLKNLGGKVLRVIGFKPRSLLPTWASVKKSIFIFPSEEHFVGSTP------- 396
Query: 397 SMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVE--PPGMHMIYLPYSDDIRPVEE 454
R N +NP +VA++ + + P G+ + LP++DD+R V
Sbjct: 397 ---REN----------ANPIMVAIIPSRAMDDETSETPYLPAGLWLYPLPFADDVRNV-- 441
Query: 455 LHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDM 512
D A PR +D+ K +++ + L ++ ++ NPSLQ HY VLQA+AL+ED
Sbjct: 442 ---DLAAPPRPADELTDKMREIVQNLQLPKAMYNPLKYPNPSLQWHYKVLQAMALDEDVP 498
Query: 513 PEIKDETVPDEEGMAR--PGVVKAVEEFKLSVYGD--------NYDEEGDVKVSEASRKR 562
+ D T+P + + G + +E G E+ DV A R +
Sbjct: 499 EALDDATIPKYRQIDKRVGGYLAEWKEALTEKAGGLMKSRAMKREAEDEDVSRPLAKRTK 558
Query: 563 KAATENAA-KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
AA + AA +N ++ LK+MTV ELK L + +S G+K L+ ++
Sbjct: 559 PAAPKEAAGGHMSNAQLKAALEQDTLKKMTVAELKDVLASKGVSAVGKKAELVDKL 614
>gi|258571848|ref|XP_002544727.1| MUS51 protein [Uncinocarpus reesii 1704]
gi|237904997|gb|EEP79398.1| MUS51 protein [Uncinocarpus reesii 1704]
Length = 613
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 250/532 (46%), Gaps = 54/532 (10%)
Query: 24 HEATKEYVVYLVDASPKMFST--TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVA 81
+++ K+ V++ ++ S M + ++ E+ A+ C ++ +II+ D +
Sbjct: 24 YKSVKDAVLFAIEISESMLTVDPNSGSKRTRPESPATAALKCAYHLMQQRIISNPKDMIG 83
Query: 82 ICFFNTRKKKNLQD---------LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK-- 130
+ + T K D ++F LD P A +KE + E+ ++
Sbjct: 84 VLLYGTESSKFYADDEDGRGSLPYPHCYLFT-----DLDVPLASDVKELRALVENEDRAA 138
Query: 131 EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
EI +V S+ N L+ A + + + +R+ + TN D+P A
Sbjct: 139 EI-----LVPSKEPVSMANVLFCANQIFTTKAPNFSSRRLFIVTNNDNPH-----AKDRA 188
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI------GLEGDDLA-LFMP 243
M RAKD DLG+ IEL PLS P+ +F S FY D+I E D + P
Sbjct: 189 MRSAATVRAKDLYDLGVVIELFPLSTPEGDFDTSKFYDDIIYRASPTDPEAPDYSHTSKP 248
Query: 244 -SAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPG--AI 295
S+G + + L + SK +R I I I + Y + + P
Sbjct: 249 TSSGGDGISILNSLLSSINSKSTPRRALFSSIPLEIGPDFKISVTGYIIFKRQEPARSCY 308
Query: 296 TWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVSTGHL 354
WL K + + D+ +++ ++ + GE I F+ +E S ++ +
Sbjct: 309 VWLGGEEPQLAKGITTQMADDSAREVEKWEIRKAYKFGGEQITFTQEEQSALRNFGDPVI 368
Query: 355 RLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN 414
R+ GF+ +S L + +++ TF++PS+ VGST +F AL +++L+ ++A+ ++ N
Sbjct: 369 RIIGFRSMSLLPIWASIKQPTFIYPSEGVFVGSTRVFSALQQTLLKQGKYALVWFVARKN 428
Query: 415 --PRLVALV-AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVK 471
P + A++ ++E+ G QV PPGM ++ LP++DDIR + +T+ + A + V
Sbjct: 429 AAPVMAAMIPGEEELDEQGAQVIPPGMWILPLPFADDIR----RNPETEHI-VAPEPLVD 483
Query: 472 KAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
K +++++ L + ++ NPSLQ HY +LQALAL+ED + +D+T+P
Sbjct: 484 KMRDVIQKLQLPKSRYDPQKYPNPSLQWHYRILQALALDEDLPEQPEDKTIP 535
>gi|444726781|gb|ELW67301.1| X-ray repair cross-complementing protein 6 [Tupaia chinensis]
Length = 512
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 220/488 (45%), Gaps = 72/488 (14%)
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK--D 201
++S LWV L K + K I+LFTNEDDP +ND T+ + R K D
Sbjct: 84 DHSFSEVLWVCVNLFSDVQVKMSHKIIMLFTNEDDP-------HRNDSTKASQARTKASD 136
Query: 202 AQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRM 260
+D GI +EL+ L P F +S FY D+I + E DL + + KLED+ ++R +
Sbjct: 137 LRDTGIFLELMHLKKPGG-FDISLFYRDIISVAEDKDLGVHL-EVSSKLEDLMRKVRAKE 194
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL 320
KR R+ F + + + Y L++ + L TN P+K + +TG+L
Sbjct: 195 TKKRPFYRLKFKFSKDTAFTVGIYNLLQKAFKSSAIRLYWETNEPVKVKTQIFSINTGSL 254
Query: 321 MQEP-AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
+ KR Q Y I +E E+K L L GFKPL LK +H L+PS F++P
Sbjct: 255 LLPSYTKRSQTYGNHQILMEKEETEELKWFDEPGLILIGFKPLVMLKKHHYLQPSMFMYP 314
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMH 439
+ ++E+ QV PPG+
Sbjct: 315 KE---------------------------------------TLEEELDDQNIQVTPPGLQ 335
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+ YL ++DD V T+ V +AS ++V K A+++++ K + F NP LQ+H
Sbjct: 336 LFYLLFADDKWKV----PITEKV-KASPEQVDKMKAIIQKLRFK-YRSDDFENPVLQQHC 389
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEA 558
L+ALAL+ + ++ D T+P E M R G + V+EFK VY +Y + +V
Sbjct: 390 RNLEALALDLMEPEQVVDLTLPKVEEMDKRLGSL--VDEFKELVYPPDYTPDRNVT---- 443
Query: 559 SRKRKAATENAAKECANYDWAD-----LADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
KRK E + E ++++ KG L ++TV LK + L + +K+ L
Sbjct: 444 --KRKQDDEGSGSERPKVEFSEEEPKAHISKGTLGKLTVPVLKEACRVYELKSEMKKQEL 501
Query: 614 ISRILTHM 621
+ H
Sbjct: 502 MDAFTQHF 509
>gi|358382641|gb|EHK20312.1| hypothetical protein TRIVIDRAFT_83371 [Trichoderma virens Gv29-8]
Length = 647
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 156/628 (24%), Positives = 289/628 (46%), Gaps = 52/628 (8%)
Query: 25 EATKEYVVYLVDASPKMFSTT-CPAEDQTD-ETHFHIAVSCIAQSLKTQIINRLYDEVAI 82
+A K+ V+ ++ SP M A + D ++ A+ C ++ +II+ D + I
Sbjct: 29 KAQKDAVLLAIEISPSMLEPPPASASKKADRDSPVQAALKCAHHLMEQRIISNPKDMMGI 88
Query: 83 CFFNTRKKKNLQDLNA--------VFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGS 134
F T K K ++ + ++F LD P A +K + E E E
Sbjct: 89 LLFGTEKTKFREEKDGRGGLGYPNCYLFT-----DLDVPAADDVKALKALVEDEEDEEEV 143
Query: 135 QYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRT 194
+ S+ N L+ A + ++ +R+ + T+ DDP S K A
Sbjct: 144 LKPATTDVV--SMSNVLFCANQIFTTKAANFGSRRLFIVTDNDDPHASDKAARS-----A 196
Query: 195 TMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI----GLEGDDLALFMPSAGQKLE 250
RAKD DLGI+I+L P++ + +F + FY D++ G E + + +G L
Sbjct: 197 AAVRAKDLYDLGITIDLFPITRGESKFDLGKFYDDIVYRDPGAEANGTEVRTSKSGDGLS 256
Query: 251 ---DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHP 305
+ + + KR + + F IA GL I + Y +++ P WLD
Sbjct: 257 LLNSLISNINSKQTPKRALFHLPFEIAPGLRITVKGYNIVQRQAPARTCYIWLDGEKAQI 316
Query: 306 LKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY 364
E + I D+ + ++ K+ + GE + F+ +E ++ + +R+ GFK
Sbjct: 317 ATGETTRIAEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKNLRDFGSPIIRIIGFKKRDM 376
Query: 365 LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVA 422
+ + +++ STF+FPS+++ +GS+ +F AL + +L ++ +A+ SN P + AL+
Sbjct: 377 IPAWASVKKSTFIFPSEEDYIGSSRVFSALWQKLLNDDKIGLAWCVLRSNAQPMIAALIP 436
Query: 423 QDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
E +G P G+ + LP +DD+R + D S+D K +++++
Sbjct: 437 SREQSDETSGTPYLPAGLWIYPLPAADDMREIS-----ADRRIDCSEDLKTKMRVIVQQL 491
Query: 481 DLKD--FSVCQFANPSLQRHYAVLQALALEE------DDMPEIKDETVPDEEGMARPGVV 532
+L ++ ++ NP+LQ HY +LQ LAL+E +D+ E K++ + G
Sbjct: 492 NLPKGIYNPLKYPNPALQWHYKILQTLALDEEVPEKPEDLTEPKNKAISKRAGGYLEDWA 551
Query: 533 KAV-EEFKLSVYGDNYDEEGDVKVSE-ASRKRKAATENAAKECANYDWADLADKGK-LKE 589
+ + +E +V + E + + S+ +++RKAA E + + LA + + L +
Sbjct: 552 ETLKDEADRAVRSRSLKREAEDETSDRPAKQRKAAAERPSGSTFSMAQLKLAVESEGLSK 611
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRI 617
MTV +LK A +ST+G+K L+ RI
Sbjct: 612 MTVVQLKDVAGARGISTSGKKADLVERI 639
>gi|154283967|ref|XP_001542779.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410959|gb|EDN06347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 599
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 146/560 (26%), Positives = 259/560 (46%), Gaps = 77/560 (13%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD----ETHFHIAV 61
DD F +++E+ D Y+ + K+ V++ ++ S M T P + + E+ A+
Sbjct: 11 DDAF-EEEEDIDETGYK---SVKDAVLFAIEISESML--TPPPDTGSKRADKESPATAAL 64
Query: 62 SCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDR 112
C ++ +II+ D + I + T + K + + ++F+ LD
Sbjct: 65 KCAYFLMQQRIISNPKDMIGILLYGTEESKFYDEDESGRGSLSYPHCYLFS-----DLDV 119
Query: 113 PTARFIKEFD---HIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADK 168
P A +K H EE E+ I+ S+E S+ N L+ A + + + +
Sbjct: 120 PAAEDVKRLRALVHQEEEAEQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSR 172
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
R+ + T+ DDP K + RAKD DLG+ IEL P+S P++EF S F+
Sbjct: 173 RLFIVTDNDDPHSKDKA-----LRSAATVRAKDLYDLGVIIELFPISRPNKEFDRSKFFD 227
Query: 229 DMI--GLEGDDLALFMPSAGQKLE-----------------DMKDQLRKRMFSKRIVKRI 269
D+I D A P+A K + K R+ +FS +
Sbjct: 228 DIIYKASPTDPEAPAFPTAQTKTSTSGGDGISLLKSLLSSINSKSVPRRALFSN-----V 282
Query: 270 SFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAK 326
I I + Y + + P WL K + + D+ +++ K
Sbjct: 283 PLEIGPDFKISVTGYLIFKRQEPARSCYVWLGGEVPQIAKGITTQMADDSAREVEKWEIK 342
Query: 327 RFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG 386
+ + GE I F+ +E + ++ +R+ GFKPLS L + +++ TF++P+++ VG
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 387 STCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIYL 443
ST +F AL++++L+ + A+ ++ N P + A++ + ++ G +V P GM ++ L
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPRKNAAPVMAAMIPGRPKLGEDGEEVIPQGMWILPL 462
Query: 444 PYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAV 501
P++DDIR E + T A D V K +++ + L + ++ NPSLQ HY +
Sbjct: 463 PFADDIRQNPETNLIT-----APDSLVDKMRTVIQLLQLPKAQYDPQKYPNPSLQWHYRI 517
Query: 502 LQALALEEDDMPEIKDETVP 521
LQALAL+ED + +D+TVP
Sbjct: 518 LQALALDEDLPEQPEDKTVP 537
>gi|296415193|ref|XP_002837276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633137|emb|CAZ81467.1| unnamed protein product [Tuber melanosporum]
Length = 645
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 161/663 (24%), Positives = 288/663 (43%), Gaps = 104/663 (15%)
Query: 22 QEHEATKEYVVYLVDASPKMFSTTCPAE-DQTDE---------THFHIAVSCIAQSLKTQ 71
Q++ K+ +++ +D S M + P E D DE + A+ C L+++
Sbjct: 24 QQYSNQKDAILFAIDVSTTMLA---PQELDDGDEGKRKGSTPASAVLTALRCAYGVLQSR 80
Query: 72 IINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQ------LDRPTARFIKEFDHI- 124
II+ D + I F T K E LD P A IK ++
Sbjct: 81 IISNPNDMMGILLFGTEATK-FDTGGGGGGGVGGGYEHCYLLLDLDIPDAEGIKGLKNLI 139
Query: 125 --EESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFG 181
E FE ++ ++E S+ N + + ++ +R+ + T+EDDP
Sbjct: 140 EDPEEFEP-------LLKPAKEQVSMANVFFAVNQIFTTKAANFQSRRLFIVTDEDDPHS 192
Query: 182 SIKGAAKNDMTRTTMQRAKDAQDLGISIE-LLPLSPPDEEFKVSHFYADMIGL----EGD 236
+ K A KN +++ RA+D DLG+ I+ +P F S FY D++ E D
Sbjct: 193 TDK-ALKN----SSVTRARDLYDLGVRIDPFFIYNPAKGGFDSSKFYDDIVYRSPTDEED 247
Query: 237 DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIR-------- 288
D + S +L M ++ + KR + + GL I + Y L +
Sbjct: 248 DYHAAV-SGKMRLRQMVSSIKSKSTPKRALFTNKLELGPGLIIGVKGYLLFKRQEKARSH 306
Query: 289 ---------PTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFS 339
V G TWL E + AD + ++ + GE I F+
Sbjct: 307 YVYTGGEKAQIVKGVTTWL---------AEETAKVADKTEI-----RKAYKFGGEQILFT 352
Query: 340 VQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSML 399
+E+ ++ +R+ GFKP S ++ N++P+ F++P + +GST +F ALH ++
Sbjct: 353 PEEMKAMRDFGEPVIRIIGFKPASAVRFDMNVKPANFIYPDETGYIGSTRVFAALHAKLV 412
Query: 400 RLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELH 456
+ + +A+ + N P++VA++ +E+ G Q+ PPG +++LP++DD+R E
Sbjct: 413 KDGKVGIAWCISRKNAAPQIVAILPSVEELGDDGVQIIPPGFFLVHLPFADDVRQNPETK 472
Query: 457 SDTDAVPRASDDEVKKAAALMKRIDL-KDFSVCQFANPSLQRHYAVLQALALEEDDMPEI 515
+ RA + + A++K++ + K + +++NPSLQ HY +LQA+AL+ED +
Sbjct: 473 -----LVRAPASLIDRMRAVVKQLHMPKGYIPDKYSNPSLQWHYRILQAIALDEDMPAQP 527
Query: 516 KDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDE-EGDVKVSEASRKRKAATENAA---- 570
D T+P + + R E +G ++ G++ + A AA +
Sbjct: 528 VDTTLPKYKLIDRHAGTYCRE------WGSELEKLAGNLAIPAARTSASAAKRSTLVKGE 581
Query: 571 ----KECANYDWADLADK-------GKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
K D D+ G + +TV +LK +L L T G+K L++R+
Sbjct: 582 GMPRKRVKAEDGGGEGDEVMAAWRGGGVGRLTVAKLKAWLGGKGLDTDGKKVDLVARVEG 641
Query: 620 HMG 622
+G
Sbjct: 642 ALG 644
>gi|170094156|ref|XP_001878299.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646753|gb|EDR10998.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 653
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 172/648 (26%), Positives = 281/648 (43%), Gaps = 81/648 (12%)
Query: 25 EATKEYVVYLVDASPKMFST-TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAIC 83
E+ K+ +++ +D S M + P + H + A+ Q K +II D V I
Sbjct: 25 ESKKDVILFCIDCSESMLALYDDPNYEDVQTCHLYAALEAAMQIQKKKIIVGPNDSVGIL 84
Query: 84 FFN-TRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK---EIGSQYGIV 139
FN TRK + Q + N + + A ++E + ++ + E+ + +
Sbjct: 85 LFNITRKSEQAQSHASEIKKNTFVYQPITPLGAPKVQELIQLLDAAREDPNELTKTFPPL 144
Query: 140 SGSR---ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
G R + + WV LR G+ KTA KR+ L T+EDDP RTT+
Sbjct: 145 VGKRVPMGDVFTSCNWV----LRDGAPKTASKRVFLITDEDDPHAGPGSKQLITSARTTL 200
Query: 197 QRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---------GLEGDDLALFMPSAGQ 247
D G+++E +S ++ F VS FY+ ++ L+ D L +
Sbjct: 201 I---DLTQAGVTVEPFFISTENKPFHVSKFYSSVLLPSNLNDEDELQEDSSVLPESISIS 257
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWL----DSVTN 303
++ED+ Q+R KR + + G +I + Y L+ GA + D +
Sbjct: 258 RIEDLLAQMRFHEVPKRAQYSVPLQLGEGFTIGVKGYGLVTEQKKGAYKYFVDLGDRMEV 317
Query: 304 HPLKTERSFICADTGALMQEPAKRFQPYKG-------------------ENIKFSVQEL- 343
+KT ++I D A + + + P G +K+ +
Sbjct: 318 ATVKT--TYIDEDQEAEVDKAKIFYGPALGAAAANDDEDNQDADDGFGTRAVKYGNRPFY 375
Query: 344 --SEIKRVSTGHL----RLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRS 397
EI+ T L +L GFK + L N++ S F++P + GS F AL +S
Sbjct: 376 TAEEIRSFRTLGLEPGIKLLGFKDRTELAFEDNIKHSQFIYPDEMSYSGSKRTFSALLKS 435
Query: 398 MLRLNR--FAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVE 453
M++ + A+A S+P L+ Q+E V G EP G H+I LP++DDIR P+E
Sbjct: 436 MIKKEKIGLALALTRRNSSPIFCYLLPQEEKVDDSGWSEPAGFHIIPLPFADDIRSAPIE 495
Query: 454 ELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDD 511
E RAS+D A A + ++ +K+ + + NP+L H A LQA A E
Sbjct: 496 EGF-------RASEDLKDYARAWIDKLSVKNGTYPPDSYPNPALAYHNAQLQASAFREQY 548
Query: 512 MPE-IKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKA-ATENA 569
P+ +D T P E M + E+K +V N DE +V V+ KRKA T +
Sbjct: 549 DPDSFEDLTAPKLE-MIHKRAGNLLGEWKSAV---NNDESANVTVATTGSKRKADVTVDE 604
Query: 570 AKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
A+ + Y D G L ++ V +LK +L A + +G+K L+ R+
Sbjct: 605 AEIRSKY------DAGALAKLRVDQLKEFLKAKGQAVSGKKAELMERV 646
>gi|402079344|gb|EJT74609.1| hypothetical protein GGTG_08449 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 653
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 160/647 (24%), Positives = 287/647 (44%), Gaps = 77/647 (11%)
Query: 23 EHEATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEV 80
+++ K+ V++ ++ S M + + + A+ C Q ++ +II D +
Sbjct: 24 DYKTQKDAVLFAIEISSSMLEQPAKGSSKKGDKDSAATAALKCAYQIMQQRIIATPSDMM 83
Query: 81 AICFFNTRKKKNLQD---------LNAVFVF---NVAEREQLDRPTARFIKEFDHIEESF 128
I F T K +D ++F +V E + R ++E D EE
Sbjct: 84 GILLFGTENSKFREDDEQGGGSARYPHCYLFMDLDVPIAEDVKR-LKNLVEEGDDPEEVL 142
Query: 129 EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAK 188
+ G+ ++ N L+ A + + +R+ + T+ D+P GS K
Sbjct: 143 KPTDGAA----------NMANLLFCANQIFTTNAPNFGSRRLFIITDNDNPHGSDK---- 188
Query: 189 NDMTRTTMQRAKDAQDLGISIELLPLSPPDEE-FKVSHFYADMIGLE-----GDDLALFM 242
+ + RAKD DLG+ IEL P+S DE F ++ FY D+I + G +
Sbjct: 189 -TLRSSAAVRAKDLYDLGVIIELFPISRKDEGVFDLTKFYDDIIYRDPASEIGAPDGIKP 247
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKR-----ISFIIANGLSIELNTYALIRPTVPGAITW 297
+G + + L + SK+ KR + F +A GL+I + Y + P +
Sbjct: 248 AKSGDDGLSLLNSLISDINSKQTPKRAYFSHLPFEVAPGLTIAVKGYIPLHVQKPARSCY 307
Query: 298 LDSVTNHPL----KTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGH 353
+ P +T + + + + K+ + GE + F+ +E +K +
Sbjct: 308 IYVEGETPQIATGETTKLEMSESLRTVHKSELKKAHKFGGEYVHFTPEETKSLKDWGSHV 367
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN-- 411
LR+ GFKP S + + +++ ST++FP++++ VGS +F AL + +LR ++ A+A+
Sbjct: 368 LRIVGFKPRSAIPAWASIKKSTYIFPAEEDYVGSHRVFTALWKKLLRDDKVALAWLVARV 427
Query: 412 PSNPRLVALV-----AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRAS 466
+NP LVA++ + DE +G P G+ + LP++DD+R D A RA
Sbjct: 428 NANPILVAIMPSRSPSDDE---SGTPFLPAGLWLYPLPFADDLR-----EPDKRATARAP 479
Query: 467 DDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEE 524
+ + ++K + L ++ +F NP+LQ HY +LQALALEE+ +D TVP +
Sbjct: 480 KALISEMEKVVKNLHLPKGTYNPAKFPNPALQWHYRILQALALEEEVPEHPEDLTVPKYK 539
Query: 525 GMARPGVVKAVEEF-------------KLSVYGDNYDEEGD-VKVSEASRKRKAATENAA 570
+AR A+ E K +V + D+ G K S + A
Sbjct: 540 AIARRS-GDALRELNEAFEAEAAVARGKRAVKHELEDDSGHPAKKSRIAISGGGGAGAGA 598
Query: 571 KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
++ +G L +MTV +LK L + +S TG+K L+ ++
Sbjct: 599 AGMSHAQLKAALAQGTLGKMTVVDLKAILTSKGISPTGKKADLLDKL 645
>gi|259484104|tpe|CBF80039.1| TPA: ATP-dependent DNA helicase II subunit 1 (EC
3.6.1.-)(ATP-dependent DNA helicase II subunit Ku70)
[Source:UniProtKB/Swiss-Prot;Acc:Q5AVC7] [Aspergillus
nidulans FGSC A4]
Length = 612
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 157/607 (25%), Positives = 279/607 (45%), Gaps = 67/607 (11%)
Query: 51 QTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNL-QDLNA---VFVFNVAE 106
Q+ E+ A+ C ++ +II+ D + + + T++ K +D N+ + N
Sbjct: 13 QSYESPATAALKCAYHLMQQRIISNPRDMIGVLLYGTKQSKFYDEDENSRGDLTYPNCYL 72
Query: 107 REQLDRPTARFIKEFDHI---EESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGS 162
L+ P+A + E + EE+ +K I+ S E S+ N L+ + +
Sbjct: 73 FTDLNIPSAHEVLELRSLVQDEENAKK-------ILEPSNEPVSMANLLFCVNQIFTLKA 125
Query: 163 SKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFK 222
+R+ + T+ D+P G K RAKD DLG++IEL P+S + EF
Sbjct: 126 PNFLSRRLFIVTDNDNPHGDNKS-----FRSAATVRAKDLYDLGVTIELFPISQIEHEFD 180
Query: 223 VSHFYADMI----GLEGDDLALFMPSAGQKLEDMKDQ------LRKRMFSKRIVKRISFI 272
S FY D+I + D A P A K+ D +D L + S+ + +R F
Sbjct: 181 TSKFYDDIIYKASPNDPDAPAYLKPDA--KMNDAQDGISLLNGLLSSINSRSVPRRAQFS 238
Query: 273 -----IANGLSIELNTYALIR--PTVPGAITWLDSVTNHPLKTERSFICADTGALMQE-P 324
+ I ++ Y L + + WL K + I D+ +++
Sbjct: 239 NMSLELGPNFKISVSGYILFKRQESARSCYVWLGGEKPQIAKGVTTQIADDSARTIEKWE 298
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
K+ + G+ + F+ +E +K +R+ GFKPLS L + N++ F++P++++
Sbjct: 299 IKKAYKFGGDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDY 358
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGG-QVEPPGMHMI 441
VGST +F AL++ +LR + A+ +Y ++P L A++A +E V G Q PPGM +I
Sbjct: 359 VGSTRVFSALYQKLLRDQKVALVWYIARKAASPVLGAMMAGEEKVDENGIQKIPPGMWII 418
Query: 442 YLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHY 499
LP++DD+R + A+ A + + + +++++ L + ++ NPSLQ HY
Sbjct: 419 PLPFADDVR-----QNPETALQVAPEPLIDQMRTVIQQLQLPKGVYDPQKYPNPSLQWHY 473
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPG--VVKAVEEFKLSVYGDNYDEEGDVKVS 556
+LQALAL+ED + D+T+P + R G V+ +E + D+ +
Sbjct: 474 RILQALALDEDVPEKPDDKTIPKYRQIDKRAGGYVLDWADELEKQYAKITADQPKSTTL- 532
Query: 557 EASRKRKA-----ATENAAKECANYDWADLADKGK-------LKEMTVQELKLYLMAHNL 604
A R KA A A K A ++ D+ + L ++TV L+ +L +
Sbjct: 533 -AKRPAKADNPDKAAPPAKKVKAEAGSGNIQDEVQKHFEQHTLSKLTVATLRDFLASQGR 591
Query: 605 STTGRKE 611
+T G+K
Sbjct: 592 ATAGKKA 598
>gi|67901532|ref|XP_681022.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
gi|74593383|sp|Q5AVC7.1|KU70_EMENI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|40742351|gb|EAA61541.1| hypothetical protein AN7753.2 [Aspergillus nidulans FGSC A4]
Length = 629
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 157/607 (25%), Positives = 279/607 (45%), Gaps = 67/607 (11%)
Query: 51 QTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNL-QDLNA---VFVFNVAE 106
Q+ E+ A+ C ++ +II+ D + + + T++ K +D N+ + N
Sbjct: 30 QSYESPATAALKCAYHLMQQRIISNPRDMIGVLLYGTKQSKFYDEDENSRGDLTYPNCYL 89
Query: 107 REQLDRPTARFIKEFDHI---EESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGS 162
L+ P+A + E + EE+ +K I+ S E S+ N L+ + +
Sbjct: 90 FTDLNIPSAHEVLELRSLVQDEENAKK-------ILEPSNEPVSMANLLFCVNQIFTLKA 142
Query: 163 SKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFK 222
+R+ + T+ D+P G K RAKD DLG++IEL P+S + EF
Sbjct: 143 PNFLSRRLFIVTDNDNPHGDNKS-----FRSAATVRAKDLYDLGVTIELFPISQIEHEFD 197
Query: 223 VSHFYADMI----GLEGDDLALFMPSAGQKLEDMKDQ------LRKRMFSKRIVKRISFI 272
S FY D+I + D A P A K+ D +D L + S+ + +R F
Sbjct: 198 TSKFYDDIIYKASPNDPDAPAYLKPDA--KMNDAQDGISLLNGLLSSINSRSVPRRAQFS 255
Query: 273 -----IANGLSIELNTYALIR--PTVPGAITWLDSVTNHPLKTERSFICADTGALMQE-P 324
+ I ++ Y L + + WL K + I D+ +++
Sbjct: 256 NMSLELGPNFKISVSGYILFKRQESARSCYVWLGGEKPQIAKGVTTQIADDSARTIEKWE 315
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEV 384
K+ + G+ + F+ +E +K +R+ GFKPLS L + N++ F++P++++
Sbjct: 316 IKKAYKFGGDQVCFTPEEQKSLKDFGEPVIRIIGFKPLSTLPFWANIKHPLFIYPTEEDY 375
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGG-QVEPPGMHMI 441
VGST +F AL++ +LR + A+ +Y ++P L A++A +E V G Q PPGM +I
Sbjct: 376 VGSTRVFSALYQKLLRDQKVALVWYIARKAASPVLGAMMAGEEKVDENGIQKIPPGMWII 435
Query: 442 YLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHY 499
LP++DD+R + A+ A + + + +++++ L + ++ NPSLQ HY
Sbjct: 436 PLPFADDVR-----QNPETALQVAPEPLIDQMRTVIQQLQLPKGVYDPQKYPNPSLQWHY 490
Query: 500 AVLQALALEEDDMPEIKDETVPDEEGM-ARPG--VVKAVEEFKLSVYGDNYDEEGDVKVS 556
+LQALAL+ED + D+T+P + R G V+ +E + D+ +
Sbjct: 491 RILQALALDEDVPEKPDDKTIPKYRQIDKRAGGYVLDWADELEKQYAKITADQPKSTTL- 549
Query: 557 EASRKRKA-----ATENAAKECANYDWADLADKGK-------LKEMTVQELKLYLMAHNL 604
A R KA A A K A ++ D+ + L ++TV L+ +L +
Sbjct: 550 -AKRPAKADNPDKAAPPAKKVKAEAGSGNIQDEVQKHFEQHTLSKLTVATLRDFLASQGR 608
Query: 605 STTGRKE 611
+T G+K
Sbjct: 609 ATAGKKA 615
>gi|302406775|ref|XP_003001223.1| Ku70 [Verticillium albo-atrum VaMs.102]
gi|261359730|gb|EEY22158.1| Ku70 [Verticillium albo-atrum VaMs.102]
Length = 645
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 173/651 (26%), Positives = 295/651 (45%), Gaps = 53/651 (8%)
Query: 4 DPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMF----STTCPAEDQTDETHFHI 59
D DD R++DEE+D E ++++ + ++ +D S M ++T D+ ++
Sbjct: 3 DRDDYKREEDEEADEEVENDYKSQNDAIILAIDVSDTMLEQPPASTSRKADK--DSAVQA 60
Query: 60 AVSCIAQSLKTQIINRLYDEVAICFFNTRKKK--NLQDLNAVFVFNVAEREQLDRPTARF 117
A+ C Q ++ +II D + I FF T K K + + + LD P A
Sbjct: 61 ALKCAYQLMQQRIIASPKDMMGILFFGTEKSKFQEHSGRSGLGYPHCYLHTDLDIPAAED 120
Query: 118 IKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNED 177
+K + E E E G I S + + + N + A + ++ + +R+ + T+ D
Sbjct: 121 VKALKALVEDEEDEEGVL--IPSSTEKVQMANVFFCANQIFTTKAANYSSRRLFILTDND 178
Query: 178 DPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDD 237
P S RAKD DLG++IEL P++ D EF ++ FY D+I + +
Sbjct: 179 SPHPS-----DKAAKSAAAVRAKDLYDLGVNIELFPITRGDNEFDLAQFYDDIIYRDANA 233
Query: 238 LALFMPSAGQKLED---MKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRP 289
A K D + + L + SK++ KR F IA GL I + Y ++
Sbjct: 234 EANHSEVRYSKTADGLSLLNSLISNINSKQVAKRALFSSVPLEIAPGLRISIKGYNILHR 293
Query: 290 TVPG--AITWLDSVTNHPLKTERSFICADTGALMQEP-AKRFQPYKGENIKFSVQELSEI 346
P WL+ + E + I DT +++ K+ + GE I FS ++
Sbjct: 294 QEPARSCYVWLEGEKPQIVAGETTRISEDTARTVEKSETKKAYKFGGEYIYFSPEDQKCA 353
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHR--SMLRLNRF 404
K +R+ GFK + + + +++ STF+FPS+++ VGST +F AL + S+ RL
Sbjct: 354 KDFGPPVIRIIGFKSRAQIPFWSSVKKSTFIFPSEEDFVGSTRVFSALWQNCSVHRLPLP 413
Query: 405 AVAFYGNPSNPRLVALVAQDEIVRAGGQVE--PPGMHMIYLPYSDDIRPVEELHSDTDAV 462
+F P L A++ E P G+ + LP++DD+R +D
Sbjct: 414 GASF-ARMRPPVLSAIIPSHESTEESNATPFLPAGLWLYPLPFADDLRGGPA--TDGTEP 470
Query: 463 PRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
PRAS++ V + +++++ L ++ ++ NP LQ HY +LQALALEE+ +D T+
Sbjct: 471 PRASNELVDQMRVIVQQLQLPKAMYNPMRYPNPGLQWHYKILQALALEEEVPEVPEDLTL 530
Query: 521 PDEEGM-ARPG-------------VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAAT 566
P + + R G K + K D D+ DVK A + + ++T
Sbjct: 531 PKHKAINKRSGGYLQDWAETLQEETQKTAKTIKTKREAD--DDADDVK--PAKKVKASST 586
Query: 567 ENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ +A + A G L +M V +LK L LS +G+K L+ R+
Sbjct: 587 KPSASGMTDAQVRAAATAGSLTKMVVADLKDLLAMKGLSISGKKADLVERL 637
>gi|402218254|gb|EJT98331.1| ku70-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 678
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 163/700 (23%), Positives = 308/700 (44%), Gaps = 117/700 (16%)
Query: 9 FRDDDEESDNEF-YQEHEAT-KEYVVYLVDASPKMFSTT---CPAEDQTDE------THF 57
+R DD D E Y E T K+ ++ + S M + +ED+ ++ T F
Sbjct: 9 WRLDDAAEDIEVDYSAWETTSKDAIILAIQCSESMHTVREELLKSEDEDEKGKGRGRTSF 68
Query: 58 HIAVSCIAQSLKTQIINRLYDEVAICFFNTRKK----KNLQDLNAVFVFNVAEREQLDRP 113
IA+ + K +++ D V I F++T + + D ++V+ +++
Sbjct: 69 EIALRSTVELQKRKVVVGPNDSVGIVFWDTVRSFAFSQKQGDYRHMYVY-----KEVGLI 123
Query: 114 TARFIKEFDHI-EESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKRIL 171
TA I+E H+ + EK S E+ + + L +LR G+ K+ RI
Sbjct: 124 TAESIQEQMHLLARAQEKNPTYLRKRFQPSTEHMPISDMLTACNAMLRTGAPKSGTHRIF 183
Query: 172 LFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI 231
L T+EDDP + + + ++ RA D + G +I +S P+ F S F+ + +
Sbjct: 184 LLTDEDDPTAGLPADRRIKLLQSARTRAGDTYEKGWNIIPFFISTPEHTFDPSKFWREAL 243
Query: 232 GLEGDDLALFMPSAGQK-----LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
EG++ S G+ E++ +++ R +R + + I+A G++I++ Y L
Sbjct: 244 SREGEEGG---SSTGEGDLVSGFEELLREMQVREIPRRTLFHVPLILAEGITIDIKGYGL 300
Query: 287 -----------------------------------------IRPTVPGAITWLDSVTNHP 305
IR +P TW D + P
Sbjct: 301 VTVQSKGQYKYLADRDGMLKEATVKTTYIDKDDQGEVPKTDIRYALPFGKTWGDEQQDEP 360
Query: 306 LKTERSFICADTGALMQEPAKRFQPYKG-------------ENIKFSVQELSEIKR-VST 351
++ + + +E + + +G + F+ + + E++ V
Sbjct: 361 MEVDET----------EEKKPKMRGRRGNILVVEGVPAVTRHEVLFTPERMKELRSMVLE 410
Query: 352 GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAF--Y 409
++L GFK L + N++ S F++PS+ + GST F AL +S+++ ++ +A
Sbjct: 411 PSIKLLGFKDRGELTFFDNVKHSVFIYPSEDDYTGSTRTFAALLQSLIKKDKIGIALSVT 470
Query: 410 GNPSNPRLVALVAQDEIVRA--GGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD 467
P+ VAL+ + E + + G Q+ PPG+HMI P++DDIR S D + + ++
Sbjct: 471 RRGYTPQFVALLPRQEELDSDTGAQLLPPGLHMIPFPFADDIR-----ESAYDQLMQCTE 525
Query: 468 DEVKKAAALMKRIDLK-DFSVCQFANPSLQRHYAVLQALALEED-DMPEIKDETVPDEEG 525
E A A + ++ ++ + + NP+L+ HY L+A A E D E +D TVP+
Sbjct: 526 HEKDAALAWINKLTIRAGYDADNYPNPTLRLHYKNLEAAAFNEAFDPSEFEDLTVPNYAS 585
Query: 526 M-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADK 584
+ R G K +E+FK SV D G V V+ ++++ T + A+ A +
Sbjct: 586 IQKRAG--KLIEQFKDSVDADKR-SAGVVAVATGAKRQADTTVDEAEVRAKH------SS 636
Query: 585 GKLKEMTVQELKLYLMAHNLSTTG-RKETLISRILTHMGK 623
G++ ++TV +L +L ++ +G RK L+ ++ ++ K
Sbjct: 637 GQINKLTVVQLTGFLRGRDIVPSGKRKAELVEQVEQYLSK 676
>gi|295657472|ref|XP_002789304.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283934|gb|EEH39500.1| ATP-dependent DNA helicase 2 subunit 1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 573
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 260/561 (46%), Gaps = 80/561 (14%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQT---DETHFHIAVS 62
DD F +++E+ D Y+ K+ V++ ++ S M T P D E+ A+
Sbjct: 11 DDGF-EEEEDIDETVYK---TVKDAVLFAIEISESML-TPPPDGDSKRADKESPATAALK 65
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDRP 113
C ++ +II+ D + I + T K K + + ++F LD P
Sbjct: 66 CAYHMMQQRIISNPKDMIGILLYGTEKSKFYDEEESGRGNLSYPRCYLFT-----DLDVP 120
Query: 114 TARFIKEFD---HIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKR 169
A +K+ H EE ++ I+ S+E S+ N L+ A + + + +R
Sbjct: 121 AAEDVKKLRALVHDEEEADQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSRR 173
Query: 170 ILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYAD 229
+ + T+ DDP +G + RAKD DLG+ IEL P+S P+++F S F+ D
Sbjct: 174 LFIVTDNDDPHSKDRG-----LRSAATVRAKDLYDLGVIIELFPISRPNQQFDRSKFFDD 228
Query: 230 MI--GLEGDDLALFMPSAGQKLEDMKDQLRKR------MFSKRIVKRISFI-----IANG 276
+I D A + + D + + SK + +R F I
Sbjct: 229 IIYKASPTDPEAPAFSTQTKSSTSGGDGISLLKSLLSSINSKSVPRRTLFSNVPLEIGPD 288
Query: 277 LSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFIC-------ADTGALMQEPAKR 327
I + Y + + P WL E IC AD A E +
Sbjct: 289 FKISVTGYLIFKRQEPARSCYVWLGG--------EEPQICKGITTQMADDSAREVEKWEI 340
Query: 328 FQPYK--GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
+ YK GE I F++ E + ++ +R+ GFKP+S L + +++ TF++PS++ V
Sbjct: 341 RKAYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYPSEEGYV 400
Query: 386 GSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV-AQDEIVRAGGQVEPPGMHMIY 442
GST +F AL++++L+ + A+ ++ N P + A++ + ++ G Q+ P GM ++
Sbjct: 401 GSTRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMIPGKTKLNEDGEQMIPQGMWILP 460
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYA 500
LP++DDIR + +T+ + A D+ V K +++ + L + ++ NPSLQ HY
Sbjct: 461 LPFADDIR----QYPETNLI-IAPDELVDKMRTVVQLLQLPKAQYDPQKYPNPSLQWHYR 515
Query: 501 VLQALALEEDDMPEIKDETVP 521
+LQALAL+ED + +D+T+P
Sbjct: 516 ILQALALDEDLPEKPEDKTIP 536
>gi|358394139|gb|EHK43540.1| hypothetical protein TRIATDRAFT_33616 [Trichoderma atroviride IMI
206040]
Length = 648
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 165/643 (25%), Positives = 288/643 (44%), Gaps = 81/643 (12%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAEDQTDE--THFHIAVSCIAQSLKTQIINRLYDEVAI 82
+A K+ V+ ++ SP M + + E + A+ C ++ +II+ D + I
Sbjct: 29 KAQKDAVLLAIEVSPSMLEPPPASSSKKAEQDSPLQAALKCAHHLMEQRIISNPKDMMGI 88
Query: 83 CFFNTRKKKNLQDLNA--------VFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGS 134
F T K K D + ++F LD P A +K + E E E
Sbjct: 89 LLFGTEKTKFRDDKDGRGGLGYPNCYLFT-----DLDVPAADDVKALRALVEEEEDEDEV 143
Query: 135 QYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRT 194
+ S+ N L+ A + ++ +R+ + T+ DDP S K
Sbjct: 144 LKPATTDVV--SMSNVLFCANQIFTTKAANFGSRRLFIVTDNDDPHASDK-----AARSA 196
Query: 195 TMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---------GLE------GDDLA 239
RAKD DLGI+I+L P++ + F + FY D++ G E GD L+
Sbjct: 197 AAVRAKDLYDLGITIDLFPIAKGESSFDLGKFYDDIVYRDVNAEANGTEVRTSKSGDGLS 256
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPG--AITW 297
L L + + + KR + + F IA GL I + Y ++ P W
Sbjct: 257 L--------LNSLISNINSKQSPKRALFHLPFEIAPGLRITVKGYNVVSRQTPARTCYIW 308
Query: 298 LDSVTNHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
LD + E + + D+ + ++ K+ + GE + F+ +E I+ +R+
Sbjct: 309 LDGEKAQIVTGETTRVAEDSARTVEKQEIKKAYKFGGEYVYFTPEEQKSIRDYGPPVIRI 368
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GFK + + + +++ STF+FPS+++ +GS+ +F AL + +L + +A+ SN
Sbjct: 369 IGFKNRNLIPAWASVKKSTFIFPSEEDYIGSSRVFSALWQKLLDSEKIGIAWCVLRSNSQ 428
Query: 415 PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVE-ELHSDTDAVPRASDDEVK 471
P L A++ E +G P G+ + LP +DD+R + E D S+D
Sbjct: 429 PVLAAVIPSREQSDEASGTPYLPAGLWICPLPTADDLRDISAERGLD------CSEDLKT 482
Query: 472 KAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-AR 528
K ++++++L ++ ++ NP+LQ HY +LQ LAL+E+ + +D T P + + R
Sbjct: 483 KMRVVVQQLNLPKGVYNPLKYPNPALQWHYKILQTLALDEEVPEKPEDLTEPKNKAINKR 542
Query: 529 PGVVKAVEEFKLSVYGDNYD----------EEGDVKVSE-ASRKRKAATENAAKECANYD 577
G +E++ ++ D D E D VSE +++RKAA E + + +
Sbjct: 543 AG--GYLEDWAETLK-DEADRAARSRSLKREVEDDGVSERPAKQRKAAAERPSG--STFS 597
Query: 578 WADL---ADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
A L + L +MTV +LK A LST+G+K L+ RI
Sbjct: 598 MAQLKAAVESEGLSKMTVAQLKDVAGAKGLSTSGKKADLVERI 640
>gi|409048387|gb|EKM57865.1| hypothetical protein PHACADRAFT_116276 [Phanerochaete carnosa
HHB-10118-sp]
Length = 657
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 159/640 (24%), Positives = 280/640 (43%), Gaps = 63/640 (9%)
Query: 25 EATKEYVVYLVDASPKMFST-TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAIC 83
E ++ +++ +D S M + P + + F A+ Q K +++ D V I
Sbjct: 25 EGKRDVILFAIDCSESMLALHDDPVYEDVQTSRFLTALEAAIQIQKKKVVVGPNDAVGIM 84
Query: 84 FFNTRKK-----KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGI 138
FNT + + ++ F+F E + P + + + + +
Sbjct: 85 LFNTTRNSEPISQGVEIKPGSFLFQPIE--TISAPKVQELIQLVDAARGDTSYLKETFPP 142
Query: 139 VSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
V G+R ++ + ++R G+ KTA KR+ L T+ED+P G ++ +
Sbjct: 143 VQGNR-MAVGDVFTSCNWIMRDGAPKTATKRVFLITDEDNPHS---GPGRDRLLTAARTT 198
Query: 199 AKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDDLA----LFMPSAGQKLED 251
D GI +E +S D+ F +S FY+ ++ + DD A L + ++ED
Sbjct: 199 LVDLVQAGIVVEPFFISSEDKLFDLSKFYSSVLLPTNIIDDDEAEPGVLPETVSITRIED 258
Query: 252 MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS 311
+ DQ++ R KR + + F +A I + Y L+ G+ + + + E
Sbjct: 259 LLDQMKFREVPKRALFSVPFELAENFVIGVKGYGLVTAQKKGSYRYFVDLGDRMELAESR 318
Query: 312 FICADTGALMQEPAKRF-------QPYKGENIKFSVQE-----------------LSEIK 347
+ G + P + +G+N K + E EI+
Sbjct: 319 TVWLQKGG-KEVPKDELLSGMGLGEAVEGKNTKDRIDEDVKHMRLTDIGLQTFYTADEIR 377
Query: 348 RVSTGHL----RLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNR 403
T L +L GFK L N++ S F++P + GS AL ++M + +
Sbjct: 378 SFRTLGLEPKIKLLGFKDYDALAFEDNIKHSYFIYPDEMTFSGSKRTSNALLKTMAKKKK 437
Query: 404 FAVAFYGNPSN--PRLVALVAQDEI-VRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTD 460
A+ N P A++ Q E+ G Q +PPG H+I LPY+DD+R V E D +
Sbjct: 438 IALVLTLMRRNATPVFCAMLPQAEVRTEDGAQSDPPGFHLIPLPYADDMRAVPEQFLDAE 497
Query: 461 AVPRASDDEVKKAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEEDDMPE-IKDE 518
RASD+ KAA + ++ +KD +S + NP+L+ H A LQA A E+ PE +D
Sbjct: 498 ---RASDELTGKAAPFVAKLAVKDGYSPDSYPNPALEFHNAQLQASAFREEFDPETFEDL 554
Query: 519 TVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYD 577
++P+ + + R G++ ++++K ++ D D V S KRKA T A+ + +
Sbjct: 555 SLPNYDMIHKRAGLM--MKQWKEALLAD--DSATIVVASSTGAKRKAKTTTAS--TSEEE 608
Query: 578 WADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+L ++ V +LK YL + LST G+K L+ R+
Sbjct: 609 VRGFYQNSELNKLKVDQLKDYLRSKGLSTAGKKADLVDRV 648
>gi|336370987|gb|EGN99327.1| hypothetical protein SERLA73DRAFT_168812 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383742|gb|EGO24891.1| hypothetical protein SERLADRAFT_449625 [Serpula lacrymans var.
lacrymans S7.9]
Length = 647
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 159/655 (24%), Positives = 283/655 (43%), Gaps = 69/655 (10%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTC-PAEDQTDETHFHIAVSCIAQSLK 69
+D+E D F+ E ++ ++ +D S M P + H A+ Q K
Sbjct: 14 EDEELQDASFF---EGKRDVILLCIDCSESMQELRDDPVYENVKTCHLLTALEAAVQIQK 70
Query: 70 TQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFE 129
++I D + I FNT ++ + +D + N + + + +A I+E + ++
Sbjct: 71 KKVIVGPNDSIGILLFNTTRQSDTKDHTSEIKKNTFAFQPITQISAPKIQELIQLLDAAR 130
Query: 130 KE---IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGA 186
+ + + ++G ++ + + LR G+ KTA KR+ L T+ED+P S A
Sbjct: 131 DDPDVLKQTFPPLTG-KKIPMGDVFTSCNWFLRDGAPKTASKRVFLITDEDNPNPS--SA 187
Query: 187 AKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA-----DMIGLEGDDLALF 241
+RTT+ D G+ +E +S PD+ F + FY+ D + E D +
Sbjct: 188 QLLTSSRTTLL---DLTQSGVQVEPFFISTPDKPFDANKFYSSVLLSDNVNDEDSDESGV 244
Query: 242 MPSAGQ--KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGA----- 294
+P + +++D+ Q+R KR + I F +A GL I + Y L+ GA
Sbjct: 245 LPESISITRIDDLLSQMRFHEVPKRALFSIPFEMAKGLVIGIKGYGLVTEQKKGAYRYFV 304
Query: 295 ------------ITWLDSVTNHPLKTERSFICADTGALMQEP---------AKRFQPYKG 333
+LD + + G + + R P G
Sbjct: 305 DLGDRMEVACSRTVYLDEDQQAEIDKSKIVFGMSLGVPVTDETSDVEDNGFGTRIVP-AG 363
Query: 334 ENIKFSVQELSEIKRVSTGH-LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
+ F E+ + ++ ++L GFK L N++ S F++P + + GS F
Sbjct: 364 KRPFFDADEVRSFRTLNLDPVIKLLGFKDKQELAFEDNVKHSYFIYPDELKFSGSKRTFS 423
Query: 393 ALHRSMLRLNR--FAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
AL ++ML + +A ++P A++ Q E + GG EPPG H+I LP++DDIR
Sbjct: 424 ALLKTMLAKGKIGLCIALTRRNASPTFCAMLPQAEKIEEGGWNEPPGFHVIPLPFADDIR 483
Query: 451 --PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALA 506
P+EE + RASD A + ++ +K+ + + NP+L H A LQA A
Sbjct: 484 AAPLEEGY-------RASDKIKDAARTWIDKLCVKNGAYPPDSYPNPALAYHNAQLQAAA 536
Query: 507 LEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAAT 566
E+ E D+ + M ++E+K + D D V V+ S+++ +
Sbjct: 537 FREEFDAEAFDDLTKPKLDMIHKRAGSLMKEWKRELVKD--DSANMVIVTAGSKRKADVS 594
Query: 567 ENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ A+ + Y ++G L ++ V +LK +L + S +G+K LI RI M
Sbjct: 595 VDEAELRSKY------EQGTLAKLRVDQLKDFLKNKSQSVSGKKAELIDRIAEWM 643
>gi|443893816|dbj|GAC71272.1| DNA-binding subunit of a DNA-dependent protein kinase [Pseudozyma
antarctica T-34]
Length = 809
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 172/699 (24%), Positives = 286/699 (40%), Gaps = 130/699 (18%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
K+ V++ +DA M + T+ + + A+ A ++ ++I+ +D V + FN
Sbjct: 134 KDMVLFCIDAGESMHRI----DPATNTSPLYSALKAAASLMQKKLISSPHDHVGVLIFNC 189
Query: 88 RKK-----------KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY 136
K +L +V NV + L +R + H+ Q
Sbjct: 190 ADTLFRSAKPGEYYKGSYELQSVRQVNVPDTYNLKALLSRAATDPKHLRTVLP-PANKQM 248
Query: 137 GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
I + +L NA G+ ++ KR+ T+ DDP R +
Sbjct: 249 RI-----DWALANA-----GVAMVAAANAGSKRVFWITDNDDPHPMSSDPKATKARRACL 298
Query: 197 QRAKDAQDLGISIELLPLSPPD-------------EEFKVSHFYADMIGLEGDDL----- 238
+ + + +G+ IE ++P D F+V+ FYAD+ DDL
Sbjct: 299 DKMNEFRKIGVRIEPFFINPTDGAASDEASTSDLSRGFEVNRFYADVFAQYDDDLEEAEA 358
Query: 239 -------ALFMPSAGQKL----------------EDMKDQLRKRMFSKRIVKRISFIIA- 274
A F +A ++L ++++D + R KR+V I F +A
Sbjct: 359 RSQPRLPAGFGKTAAEQLKGQEPRRSLWDSAVRFQELEDDIATRETPKRVVFNIRFELAA 418
Query: 275 ----------------------------NGLSIELNTYALIRPTVPG----AITWLDSVT 302
I + Y+L+ T G I D
Sbjct: 419 LDAPTADTQTQKQGSAAEEQLPQARMRGRKWQIGIKGYSLVSRTTKGNPVKVIVDDDCGE 478
Query: 303 NHPLKTERSFICADTGALMQE----PAKRF---QPYKGENIKFSVQELSEIKRVST-GHL 354
+ T + +I A++G + + PA +F +G+ + F+ QEL IK L
Sbjct: 479 LKEVVTHQHYIDANSGKPLSKEQVIPAFQFGNSSSLRGQ-VTFTPQELKSIKSFGMLPCL 537
Query: 355 RLHGFKPLSYLKDYH-NLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
+L GF+ L + N++ + F++PSD E GS F AL SM+ + + +
Sbjct: 538 KLIGFRDRDDLLRFEWNVKHAYFIYPSDVEWKGSKKTFTALLNSMVSKGKVGLGLFMPRQ 597
Query: 414 N--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDD 468
N P VA+V Q +E+ G Q+ PPGMH+I LPY+DD+R P LH++ A D
Sbjct: 598 NVVPVFVAIVPQQEELTEEGQQLAPPGMHLITLPYADDVRDIPTNLLHTED-----AKDA 652
Query: 469 EVKKAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA 527
+V +A A ++R K F+ + NP+L HYAVL A A +E+ D TVP +
Sbjct: 653 QVDRAVAFIERYQKKQPFNPDHYPNPALNHHYAVLMATAFQEEQPAGPTDLTVP-QYATI 711
Query: 528 RPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECA---NYDWADLADK 584
R ++E+ S+ DE+ + + ++A T ++ + + + DL K
Sbjct: 712 RKRTAHLIQEWHASI-----DEDPRLAMVAEGSSKQAKTSTGVRKTSFEDDSEILDLWQK 766
Query: 585 GKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
GKL TV ELK + L GRK L+ R+ H+ K
Sbjct: 767 GKLSAYTVAELKSACEFYRLDAKGRKADLLVRLDAHIRK 805
>gi|213401229|ref|XP_002171387.1| Ku70 [Schizosaccharomyces japonicus yFS275]
gi|211999434|gb|EEB05094.1| Ku70 [Schizosaccharomyces japonicus yFS275]
Length = 649
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 145/587 (24%), Positives = 256/587 (43%), Gaps = 85/587 (14%)
Query: 14 EESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQII 73
+ES+NE+ + + ++++++ SP M P D D A+ C Q ++I
Sbjct: 10 DESENEYGKTYA-----ILFVIEVSPSMME---PISD-VDPCSLQTALICAYQLAAQKVI 60
Query: 74 NRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
+ D + + F T V+ FD +++S
Sbjct: 61 STPNDLIGVLLFGT-------------VY------------------FDSVKQSLRP--- 86
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
S SL +AL+ A +L ++K +R+ L T+ D P + + KN +
Sbjct: 87 -------SSNPPSLSHALYSASIML--TTTKNIGQRLFLITDNDTP--AWDSSQKNAL-- 133
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALF--MPSAGQKLED 251
MQRAKD +D+ I + + L P F VS+FY + + + + + ++L +
Sbjct: 134 --MQRAKDLKDMNIDLCPIFLDSPAHSFNVSNFYREFLSIASRNHETIPQVQRGQEQLNN 191
Query: 252 MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNH-----PL 306
M +R +R + +++ + I + +A+ R VP TW+ + P
Sbjct: 192 MLHAVRALQKPRRAQFHFNMELSDNVKINVEGFAIFRRLVPTKTTWVYTKGEQFAIAVPQ 251
Query: 307 KTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLK 366
T+ SF L ++ KR + G+ + FS ELS+I+ LR+ GF+PL+ K
Sbjct: 252 STQVSF--ETKRVLKKDEIKRAYMFGGKQVVFSQDELSKIRYFGGPVLRIIGFRPLTTYK 309
Query: 367 DYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQD 424
+ N++PS F+ ++ GS +F ALH +LR N + ++ + P VA++A
Sbjct: 310 SWMNVKPSLFIRAKSIDIKGSELVFSALHAKLLRDNLLGIGWFIAEQKATPCFVAIIATP 369
Query: 425 EIVRAGGQ-VEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLK 483
V P G +I LP +DDIR V T A P + + +++ I+L+
Sbjct: 370 TSTAVLDDFVLPQGFFLIQLPTADDIRTVPP---RTKAKP--DNTLLSGFKQIVRGIELR 424
Query: 484 DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG-----VVKAVEE 537
F +++N +LQ HY +LQALAL+E ++ D T+P + R G V A
Sbjct: 425 SFYPGKYSNIALQWHYTILQALALDEPVPSQLVDTTLPKYAAIEKRVGPFIKQVNGAANR 484
Query: 538 FKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKEC----ANYDWAD 580
+ + + V SE R +++ AK +N+D++D
Sbjct: 485 ISRAHTSPKAETQETVAASEPREIRSSSSAPKAKRIRTQKSNFDYSD 531
>gi|392564799|gb|EIW57977.1| ku70-like protein [Trametes versicolor FP-101664 SS1]
Length = 663
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 167/650 (25%), Positives = 293/650 (45%), Gaps = 75/650 (11%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDET-HFHIAVSCIAQSLKTQIINRLYDEVAI 82
+E+ ++ +++ +D SP M + +T + +A+ Q K +++ D V I
Sbjct: 23 YESKRDVILFCIDCSPSMLEMRDDERYEDVQTCNLMVALEAAMQIQKKKVLVGPNDAVGI 82
Query: 83 CFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTA-----RFIKEFDHIEESFEKE--IGSQ 135
FNT K+ + NA +V + + +P A + ++ ++E+ EK +
Sbjct: 83 VLFNTTKRND----NADDSTDVKKGTYVYQPLATIDAPKVMELVQLLDEAREKPDFLRKT 138
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
+ ++ R ++ + L ++R G+ KTA KRI T+EDDP G RTT
Sbjct: 139 FPPMTDKR-IAVGDVLTSCNWVMRDGAPKTATKRIFFITDEDDPHPGPSGHRFITSARTT 197
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA---------DMIGLEGDDLALFMPSAG 246
+ D G+++E + D+ F + FY+ D+ + D +P +
Sbjct: 198 LI---DLMQTGVTVEPFFIGTEDKPFDPAKFYSSVLLPTNLTDLDDISDGDPGSILPESI 254
Query: 247 Q--KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNH 304
++E++ Q+R KR + + +A G I + Y LI GA + + +
Sbjct: 255 SITRVEELLAQMRFHEVPKRALFSVPLTLAPGFMIGVKGYGLITEQKKGAYRYFADLGDR 314
Query: 305 --PLKTERSFICADT-----------GALMQEPAKRFQPYKGENIKFS------VQELS- 344
P+ + +++ D G + P+ +G++ K S VQ S
Sbjct: 315 MEPVTSRAAYVDEDRDAEADKAEILYGMDLGAPSAEVDGEEGQDAKTSDVGTRAVQLGSR 374
Query: 345 ------EIKRVSTGHL----RLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
E++ T L +L GFK S L N++ S FV+P + GS F AL
Sbjct: 375 VFYTADEVRSFRTLGLEPGIKLLGFKDRSELAFEDNVKHSVFVYPDEMTYSGSKRTFTAL 434
Query: 395 HRSMLRLNRFAV--AFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPV 452
R+M++ + A+ A ++P A++ Q E V G EPPG H+I LP++DDIR
Sbjct: 435 LRTMIKKEKIAIVLALMRRNASPVFCAVLPQAEKVDESGWREPPGFHLIPLPFADDIRAA 494
Query: 453 EELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVC--QFANPSLQRHYAVLQALALEED 510
+ RAS + V A ++++ +K+ S + NP+L H L+A A ED
Sbjct: 495 SQQKGF-----RASTELVAAARKWIEKLKVKNGSYPPDSYPNPALAYHNTQLEASAFRED 549
Query: 511 DMPE-IKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEAS-RKRKAATE 567
P+ +D TVP + M R G K +EE+K ++ D D V + RKRKA T+
Sbjct: 550 FDPDAFEDLTVPKLDMMHKRAG--KLIEEWKQALVED--DTANIVAAPPTTGRKRKAETQ 605
Query: 568 NAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ A + A L D +L ++ V++LK +L + + +G+K L+ R+
Sbjct: 606 DVAVDEAEV--RRLYDGEQLHKLRVEDLKNFLKSKSEPVSGKKADLVERV 653
>gi|321478596|gb|EFX89553.1| hypothetical protein DAPPUDRAFT_40467 [Daphnia pulex]
Length = 554
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 157/583 (26%), Positives = 254/583 (43%), Gaps = 51/583 (8%)
Query: 10 RDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAED----QT-DETHFHIAVSCI 64
RD EE + Y +A +++L+DAS MF P +D QT ++ F +A+ C
Sbjct: 4 RDALEEESYDAYDGRDA----IIFLIDASVPMFKKP-PVDDIDAAQTENDCPFVLAIKCA 58
Query: 65 AQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI 124
+L ++I D VAI F T KK D V+ N + L P I + D +
Sbjct: 59 YNTLCSKIFTDPNDSVAIVLFGT-KKTAPNDKYGVYT-NTFLLQDLQNPDCEPITQLDDM 116
Query: 125 EESFEKEIG-SQYGIV-SGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS 182
K+ G +Y S + SL ++LW+ + K SKT K+I LFTN D+P
Sbjct: 117 ---LNKDGGMDEYMYAESNPQSISLADSLWLCSSIFSKHKSKTDKKQIFLFTNNDEPHSK 173
Query: 183 IKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFM 242
K +R D QD G+SI L P+ EEF + Y ++ L +D +
Sbjct: 174 FSTKQKQ-----AERRIGDLQDGGVSIFLFPIG---EEFNTTKVYQEL--LVSNDKGGIL 223
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
P + +++ ++ ++ KR + F + + + Y LIRP LD T
Sbjct: 224 PGS-MTTDELLLKICRKCQKKRTFATLGFNLDSNTKFGVRLYNLIRPAAQPKRVPLDKRT 282
Query: 303 NHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKP 361
N P+K+ + A+T L+ + E I+ +L+ +K L GF P
Sbjct: 283 NEPVKSVTTKFNAETAETLLPSELIKCTTVCDEKIRLDKNDLASLKSKFPSGFTLLGFIP 342
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL-HRSMLR-LNRFAVAFYGNPSNPRLVA 419
+ LK + L P++F++P + V GS IF AL HR R V PR+VA
Sbjct: 343 IGKLKLHFYLSPASFIYPDEDLVKGSRMIFGALVHRCKARGFAPLCVLKITAAMKPRIVA 402
Query: 420 LVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVE--ELHSDTDAVPRASDDEVKKAAALM 477
L+ +E Q G H+I LP+ +D+R EL T + +DE K L
Sbjct: 403 LLPHEE--HDPNQAPLFGFHVIILPFRNDVRKFNYSELVESTTVL----NDERK---FLT 453
Query: 478 KRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVE 536
++ ++ + +P+L+ + L+ +AL +++ ++D +PD + + R G +
Sbjct: 454 SKV---GYTPSDYLDPALRTKWNTLEGMALGRENIESVEDLVMPDLDAIDDRLG--QRST 508
Query: 537 EFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWA 579
F V+ Y V AS+ + E A +E A W
Sbjct: 509 TFNDLVFPLGYQSP---YVPSASKAKDPKNEAAVEEAAKNGWV 548
>gi|224148413|ref|XP_002336648.1| predicted protein [Populus trichocarpa]
gi|222836438|gb|EEE74845.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/102 (70%), Positives = 83/102 (81%), Gaps = 3/102 (2%)
Query: 495 LQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDV- 553
LQRHYAVLQ LAL+EDDMPEI DET+PDEEGM RPGVVKAVE+FKLSVYG+NYDEE D+
Sbjct: 1 LQRHYAVLQVLALDEDDMPEINDETLPDEEGMTRPGVVKAVEKFKLSVYGENYDEESDMG 60
Query: 554 --KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQ 593
K S+AS+K+K A EN AKE ANY+W DLAD G + + Q
Sbjct: 61 TGKASDASKKQKKAAENGAKESANYNWPDLADNGHVCFLVFQ 102
>gi|355704977|gb|EHH30902.1| hypothetical protein EGK_20722, partial [Macaca mulatta]
Length = 445
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 210/454 (46%), Gaps = 40/454 (8%)
Query: 94 QDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLYNAL 151
+D N+V N+ ++LD P A+ I + D F+ + G + G++ + S L
Sbjct: 20 KDKNSVNFKNIHILQELDNPGAKQILKLDQ----FKGQQGQKCFQGLMGHGSDYSFSEVL 75
Query: 152 WVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM--QRAKDAQDLGISI 209
WV L K K+I+LFTNED+P G ND + +A D +D+GI
Sbjct: 76 WVCAKLFSDVQFKMRYKKIMLFTNEDNPRG-------NDSVKACQASTKADDLRDIGIFF 128
Query: 210 ELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRI 269
+L+ L F +S FY D+I + ++ + + KLED+ ++R + +++
Sbjct: 129 DLMHLKKLGG-FNISLFYRDIISIAKNENPIHFEKSS-KLEDLLQKVRAKE-----ARKL 181
Query: 270 SFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPAKRF 328
+ + I + Y L++ + L TN P+KT+ +TG L+ KR
Sbjct: 182 KLKLNKDIVISVGIYNLVQKALKPPPIKLYRKTNEPVKTKYQTFNINTGNLLLPSDTKRP 241
Query: 329 QPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGST 388
Q Y I +E E+ L L FKPL LK +H LRPS F +P + V GS+
Sbjct: 242 QIYGSHQIILEKEETEELNWFDEPALMLMVFKPLVMLKKHHYLRPSLFTYPEESLVNGSS 301
Query: 389 CIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPY 445
+F AL L A+ Y N P VALV+Q +E+ QV PG +++LP+
Sbjct: 302 TLFSALLIECLEKVVIALCRYTPCRNNPPYFVALVSQEEELDDQKIQVTTPGFQLVFLPF 361
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+D+ + + A+ ++V K A+++++ + F NP LQ+H+ L+
Sbjct: 362 ADNEKVM------------ATPEQVGKMKAIVQKLCF-TYRSDSFENPVLQQHFTNLEPF 408
Query: 506 ALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
L + + D T+P E M + + V EFK
Sbjct: 409 TLYLMEAEQAVDLTLPKVEEMNKI-LGSMVNEFK 441
>gi|393221301|gb|EJD06786.1| ku70-like protein [Fomitiporia mediterranea MF3/22]
Length = 644
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 160/650 (24%), Positives = 281/650 (43%), Gaps = 86/650 (13%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAEDQTDET-HFHIAVSCIAQSLKTQIINRLYDEVAIC 83
E ++ +++ +D S M + + + +T H A+ + K +++ D I
Sbjct: 25 EGKRDIILFAIDCSESMQAFHDDSNKEGSQTSHLFAALQAAMKLQKRKVVVGPNDAAGIL 84
Query: 84 FFNT-RKKKNLQD-----LNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYG 137
FNT RK +N++ + FV+ Q+D P + + + H + K + +Y
Sbjct: 85 LFNTSRKSENMERGATEYKSGTFVYEPVG--QIDAPKIQNLIQLLHEAKDNHKWL--RYE 140
Query: 138 IVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
++ L + LR G K+ KRI L T+EDDP K A +TT+
Sbjct: 141 FPPSEKQVPLGDVFTSCNWALRDGMPKSGIKRIFLITDEDDPHPGAKNAQLVTSAQTTLL 200
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD------DLALFMPSAGQKLED 251
D G+S+E +S ++ F + FY+ ++G + D L + +++D
Sbjct: 201 ---DLTQAGVSVEPFFISTEEKSFDPTKFYSAVLGSSLEEEAEESDGLLSDAISVSRIDD 257
Query: 252 MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS 311
+ Q+R R KR + I F + +G I + Y L+ G + + + E
Sbjct: 258 LLAQMRFREMPKRALFSIPFELGDGFVIGVKGYGLVTEQKKGHYKYFMDMGDRLEVVEPK 317
Query: 312 FICADT-------------GALMQEPAK---------RFQPYKGENIKFSVQELSEIKRV 349
+ D G + PA+ R P K + ++ +E+ + +
Sbjct: 318 TLYVDENEQREIDKTKVMYGMQLGPPAEENEDEEYGVRVVP-KRSKVFYTAEEVRAFRTL 376
Query: 350 S-TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIF------------IALHR 396
+ L+L GFK + L N+R S F++P ++ GS F I L R
Sbjct: 377 GLSPGLKLLGFKDETELAIEDNVRHSLFIYPDEQNYSGSKRTFTALLKTLKKKRKIGLVR 436
Query: 397 SMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVEE 454
++LR N S+P AL Q+E G VEP G H+I P++DD+R P+E+
Sbjct: 437 ALLRSN----------SSPMFCALCPQEEKEDENGFVEPAGFHLIPYPFADDLRAAPIEQ 486
Query: 455 LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFA--NPSLQRHYAVLQALALEEDDM 512
RAS D + A + ++ +K A NP+L HYA L+A A E+
Sbjct: 487 -------GVRASTDALDVAKQWISKLQIKSGGYPPDANPNPALAFHYAQLEASAFREEYD 539
Query: 513 PE-IKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAK 571
P+ KD T+P + M ++E+K + G N + + +A KRKA T
Sbjct: 540 PDTFKDPTLPKLD-MIHKRAGPLIKEWK-KIVGSN-ENANTTFIQKAGTKRKADTSVLEA 596
Query: 572 ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
E + + + G+L ++ V +LK +L + +LS +G+K L+ R++ ++
Sbjct: 597 EIRSKN-----ESGQLGKLKVDQLKEFLKSKSLSVSGKKSDLLDRVVDYL 641
>gi|337743283|gb|AEI73138.1| XRCC 6 [Kryptolebias marmoratus]
Length = 306
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 158/303 (52%), Gaps = 14/303 (4%)
Query: 186 AAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMP-S 244
+AK+ RT +A D ++ G+ I+L+ + D F VS F+ D++ D+ L +
Sbjct: 8 SAKDRQART---KASDVKETGVVIDLMHVMKADG-FDVSLFFRDIVSPPEDESELGLQLE 63
Query: 245 AGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNH 304
KLED++ ++R + KR + R+S + GL++ + YA A L TN
Sbjct: 64 PCDKLEDLQKRVRAKEQKKRAMARLSLCLGEGLNVAVGVYATAVQARKPAPVRLYRETNE 123
Query: 305 PLKTERSFICADTGALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLS 363
P++++ TG+L+ K+ Q Y + I E+ IK+ L L GFKP+
Sbjct: 124 PVRSKTRTFHTQTGSLLLPSEIKKAQVYGKKQIVMERDEVDAIKKFDDPRLFLIGFKPME 183
Query: 364 YLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV 421
LK +H++RPS F++P +++V GS C+F AL + N FA+ + N PR VALV
Sbjct: 184 KLKLHHHIRPSVFIYPEEEDVKGSACLFSALLKKCSERNIFALCRCISRRNYPPRFVALV 243
Query: 422 AQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRI 480
Q E V G Q+ PPG ++IYLPY+DD+R + D P AS +V K ++ ++
Sbjct: 244 PQLEDVDEGKVQITPPGFNVIYLPYADDLRTL-----DPPRCPPASQMQVDKMKEIVYKL 298
Query: 481 DLK 483
K
Sbjct: 299 RFK 301
>gi|343428800|emb|CBQ72345.1| related to ATP-dependent DNA helicase II, 70 kDa subunit
[Sporisorium reilianum SRZ2]
Length = 723
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 160/693 (23%), Positives = 284/693 (40%), Gaps = 118/693 (17%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
K+ V++ +DA M + T+ + + A+ A ++ ++I+ +D V + FN
Sbjct: 48 KDMVLFCIDAGASMHRI----DPTTNTSPLYSALKAAASLMQKKLISSPHDHVGVLVFNC 103
Query: 88 -----RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGS 142
R K + + + Q++ P +K H E K + + ++ +
Sbjct: 104 AETLFRSAKPGEYYKGSY--ELQSVRQVNVPDTYNLKALLHEAEHDPKHLLT---VLPPA 158
Query: 143 RENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDA 202
+ + G+ ++ KR+ T+ DDP R + + +
Sbjct: 159 EKQMRIDWALANAGVAMVAAANAGSKRVFWITDNDDPHPMSIDPKATKARRACLDKMNEF 218
Query: 203 QDLGISIELLPLSPPDEE------------FKVSHFYADMIG------------------ 232
+ +G+ IE ++P F+++ FYAD+
Sbjct: 219 RKIGVRIEPFFINPNAAPASQASSSDLTRGFEINKFYADVFAHYDDDRDDAEDEDSVYPR 278
Query: 233 -------------LEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA----- 274
L G + + + + ++++D + R KR+V I F +A
Sbjct: 279 RLPKGFSRTAAEQLRGQEAKRSLWDSSVRFQELEDDIATRETPKRVVFNIRFELAALDPP 338
Query: 275 ----------------------NGLSIELNTYALIRPTVPG----AITWLDSVTNHPLKT 308
I + Y+L+ T G I D + T
Sbjct: 339 PADSASAATDAEERLPQARTRGRKWQIGVKGYSLVSRTTKGNPVKVIVDDDCGELKEVVT 398
Query: 309 ERSFICADTGALMQE----PAKRF---QPYKGENIKFSVQELSEIKRVST-GHLRLHGFK 360
+ +I A +G + + PA +F +G+ + F+ QEL IK L+L GF+
Sbjct: 399 HQHYIDAGSGKPLSKEQVIPAFQFGTSSSLRGQ-VTFTPQELRSIKTFGMLPCLKLIGFR 457
Query: 361 PLSYLKDYH-NLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRL 417
L + N++ + F++PSD E GS F AL +SM++ + + + N P
Sbjct: 458 DRDELLRFEWNVKHAYFIYPSDAEWKGSRKTFTALLQSMVKKGKVGLGLFMPRQNVVPVF 517
Query: 418 VALVAQDEIVRAGGQ-VEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAA 474
VA+VAQ+E V A GQ V PGMH+I LPY+DD+R P LH++ A+D +V KA
Sbjct: 518 VAIVAQEEEVSADGQQVTAPGMHLITLPYADDVRDVPTNLLHTED-----ANDTQVDKAI 572
Query: 475 ALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVK 533
A ++R K F+ + NP+L HY+VL A A +E E D TVP +K
Sbjct: 573 AFIERYQKKQPFNPDHYPNPALNHHYSVLMATAFQEPLPTERTDLTVPQY------ATIK 626
Query: 534 AVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECA---NYDWADLADKGKLKEM 590
+ + D D++ + + AS ++A T + ++ + + + +L +GKL
Sbjct: 627 KRTAHLIQEWHDAIDDDARLSMVAASSAKQARTSTSVRKTSFEDDSEIMELWGQGKLSAY 686
Query: 591 TVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
TV EL+ + L G+K L+ R+ H+ K
Sbjct: 687 TVDELRSACEFYRLDKKGKKADLLVRLDAHIRK 719
>gi|392594323|gb|EIW83647.1| Ku DNA-binding complex, Ku70 subunit [Coniophora puteana RWD-64-598
SS2]
Length = 648
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 158/646 (24%), Positives = 276/646 (42%), Gaps = 83/646 (12%)
Query: 25 EATKEYVVYLVDASPKMFSTT-CPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAIC 83
E ++ +++ +D SP M P + + ++ Q K +++ D V I
Sbjct: 25 EGKRDVILFCIDCSPSMQELKEDPVYEGVQTSRLLTSLEAAMQIQKKKVLVGPNDCVGIL 84
Query: 84 FFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE---IGSQYGIVS 140
FNT + + +QL + A I+E + E ++ + S+Y +
Sbjct: 85 LFNTTRTNEEAGYASEIKKGCFVYQQLGQVNAPKIQELIQLVEGAREDSDLLKSEYPPLE 144
Query: 141 GSR---ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQ 197
G R + + WV +R + KTA KR+ L T+ DDP K + RTT+
Sbjct: 145 GKRVPIGDVFTSCNWV----IRDNAPKTATKRVFLITDNDDPHPGTKQLLTS--ARTTLV 198
Query: 198 RAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEG------DDLALFMPSAGQKLED 251
D + G+ +E + D F + FY+ ++ G D+ L + ++ D
Sbjct: 199 ---DLIESGVQVEPFFIGTEDRPFDPTKFYSSVLINSGFDDEAEDEGTLPESISITRIND 255
Query: 252 MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS 311
+ Q+R KR + I+F +AN I + Y L+ G+ + + + E
Sbjct: 256 LLAQMRIHEVPKRAIFNITFELANDFVIGVKGYGLVTEQKKGSYKYFVDLGDRMEVAESR 315
Query: 312 FICADT-------------GALMQEP---------------AKRFQPYKGENIKFSVQEL 343
+ D G + P R PY G+ + +E+
Sbjct: 316 TVYIDEEQQAEVEKSQLVYGMELGAPPANENSDDEMDGAEYGTRVVPY-GQRPFYDAEEV 374
Query: 344 SEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLN 402
+ + L+L GFK + L N++ STF++P +++ GS F A+ + ML +
Sbjct: 375 RSFRTLELEPGLKLLGFKDRNELAFEDNVKHSTFIYPDEQKYAGSRRTFTAMLKVMLEKD 434
Query: 403 RFAV--AFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSD 458
+ + A + P A++ Q E V GG EP G H+I LP++DDIR P+EE
Sbjct: 435 KIGLVRALLRKNAAPVFCAMLPQAEKVEEGGWNEPGGFHLIPLPFADDIRAAPIEEGF-- 492
Query: 459 TDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPE-I 515
RASDD A A + ++ +K+ + + NP+L H A LQA A E+ PE
Sbjct: 493 -----RASDDVKNAARAWIDKLCVKNGAYPPDTYPNPALAFHNAQLQASAFREEFDPESF 547
Query: 516 KDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECA 574
+D T+P + M R G + ++E+K ++ D+ + ++ A KRKA
Sbjct: 548 EDVTLPKYDMMHKRAG--ELIKEWKKVLFKDD---AANTIIATAGTKRKADV-------- 594
Query: 575 NYDWADLADK---GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ D A++ K G L ++ +LK +L + +G+K L+ R+
Sbjct: 595 SVDEAEIRSKYEDGTLNKLRNDQLKEFLKNKSQPVSGKKADLVERV 640
>gi|320592811|gb|EFX05220.1| dsb repair complex subunit [Grosmannia clavigera kw1407]
Length = 685
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 156/664 (23%), Positives = 283/664 (42%), Gaps = 81/664 (12%)
Query: 24 HEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVS----CIAQSLKTQIINRLYDE 79
++ K+ V++ +D S M P ++ AVS C Q ++ +II + D
Sbjct: 25 YKTQKDAVLFAIDVSSSMLEKPPPPATKSKSADRDSAVSAALRCAYQIMQQRIIAQPKDL 84
Query: 80 VAICFFNTRKKK-------------NLQDLNAVFVF-NVAEREQLDRPTARFIKEFDHIE 125
+ + FF T K + +L +N + + L+ P ++ +
Sbjct: 85 MGMLFFGTEKSRFRPGDGDGGEDADSLASINHTSSYPHCYLFMDLEVPAVEDVRALKSMV 144
Query: 126 ESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKG 185
E E + + ++ N L+ A + + +R+ + T+ DDP K
Sbjct: 145 EEGE-DPDEVLKPAPAGKSVTMANVLFCANQIFTTNAPNFGSRRLFIITDNDDPHSGDK- 202
Query: 186 AAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--------GLEGDD 237
+ RAKD DLG+ IEL P+S +F + FY D+I G G
Sbjct: 203 ----AARSASAVRAKDLYDLGVGIELFPISREGAKFDLGKFYDDIIYRDPAAEDGSSGRV 258
Query: 238 LALFMPSAGQKLEDMKDQLRKRMFSKR-IVKRISFIIANGLSIELNTYALIRPTVPG--A 294
+A L + + + KR ++F IA GL+I + Y L+ P
Sbjct: 259 IAARSGGGLSLLGSLISNINAKQTPKRSYFSNLTFEIAPGLNISVKGYILLNRQKPARTC 318
Query: 295 ITWLDSVTNHPLKTERSFICADTGALMQ--EPAKRFQPYKGENIKFSVQELSEIKRV--- 349
W+ +E + +D+ ++ E K ++ + GE + F+ +EL K
Sbjct: 319 YVWVGGEIAKLATSETIKVDSDSTRTVEVGEIKKAYK-FGGEFVYFTPEELKGFKTWEFP 377
Query: 350 ---STGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
+ LR+ GFKP + + +++ STF++PS+++ VGST IF AL + + + + A+
Sbjct: 378 DGWNGKGLRIIGFKPRVLIPSWASVKRSTFIYPSEEDYVGSTRIFSALWQKLKKSEKVAI 437
Query: 407 AFYGN--PSNPRLVALVAQDEIVRAGGQVE----------------PPGMHMIYLPYSDD 448
A++ +NP LVA++ + P G+ + LP+++D
Sbjct: 438 AWFVPRINTNPVLVAVIPSNGPDGGSEGDGDGSGDGEKRSVNPSHLPAGLWLYPLPFAED 497
Query: 449 IRPVEELHSDTDAVPRASD-DEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALAL 507
IR ++ + +PR ++ E+ K + + ++ NP+LQ HY +LQ LAL
Sbjct: 498 IRKFDDSRA---PLPRPAELTELMKPVVENLLLPKTAYDPAKYPNPALQWHYKILQVLAL 554
Query: 508 EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGD------------NYDEEGDVKV 555
+E+ + D T+P + + + V ++ E K + + +++G +
Sbjct: 555 DEEVPKQGDDPTLPKYKAIDK-RVGGSLAEIKERLKSEATHLQTVRAIKREAEDDGAGTM 613
Query: 556 SEASRKRKAATENAAK--ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
+ KR T AA+ + +N D + GKL V ELK L + ++ST+GRK L
Sbjct: 614 GKPLSKRPKTTSAAAEKGKMSNKDIQNAIATGKLSAKPVVELKEILSSWSVSTSGRKAEL 673
Query: 614 ISRI 617
I RI
Sbjct: 674 IERI 677
>gi|293342360|ref|XP_001067309.2| PREDICTED: X-ray repair cross-complementing protein 6-like [Rattus
norvegicus]
Length = 422
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 187/375 (49%), Gaps = 22/375 (5%)
Query: 258 KRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADT 317
K++ + ++ R+ F + +++ + Y L++ L TN P+KT+ +T
Sbjct: 60 KQVRKQELIMRLKFKLGKDVALMVGVYNLVQKANKPFPVRLYRETNEPVKTKTRTFNVNT 119
Query: 318 GALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTF 376
G+L+ KR + I +E E+KR L L GFKP+ LK++H LRPS F
Sbjct: 120 GSLLLPSDTKRSLTFGTRQIVLEKEETEELKRFDEPGLILMGFKPMVMLKNHHYLRPSLF 179
Query: 377 VFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQV 433
++P + V GS+ +F AL + AV Y N P VALV Q +E+ QV
Sbjct: 180 LYPEESLVNGSSTLFSALLTKCVEKEVIAVCRYTARKNVSPYFVALVPQEEELDDQNIQV 239
Query: 434 EPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANP 493
P G +++LPY+DD R V T+ V A+ +++ K A+++++ + F NP
Sbjct: 240 TPAGFQLVFLPYADDKRKV----PFTEKV-MANPEQIDKMKAIVQKLRF-TYRSDSFENP 293
Query: 494 SLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDV 553
LQ+H+ L+ALAL+ + ++ D T+P E + + + +EFK VY Y+ EG +
Sbjct: 294 VLQQHFRNLEALALDMMESEQVVDLTLPKVEAIKK-RLGSLADEFKELVYPPGYNPEGKI 352
Query: 554 KVSEASRKRKAATENAAK-----ECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG 608
KRKA E +A E + + DL KG L ++TV L+ A+ L +
Sbjct: 353 A------KRKADNEGSASKKPKVELSEEELKDLFAKGTLGKLTVPALRDICKAYGLKSGP 406
Query: 609 RKETLISRILTHMGK 623
+K+ L+ + H+ K
Sbjct: 407 KKQELLEALSRHLEK 421
>gi|390597184|gb|EIN06584.1| Ku DNA-binding complex Ku70 subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 663
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 156/661 (23%), Positives = 282/661 (42%), Gaps = 98/661 (14%)
Query: 24 HEATKEYVVYLVDASPKMFST---TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
++A ++ +++ +D S M E + H +A+ + K +++ D +
Sbjct: 24 YDARRDVILFAIDCSSSMLELRDDPTYEEGEVKTCHLLVALQSAMEISKKKVLVGPNDSI 83
Query: 81 AICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS 140
I FFNT ++ D N+ + ++ +P A + + S +E+ +++
Sbjct: 84 GILFFNTTRRNQKGD-------NMGQSSEI-KPGAYVYQPISTVNASSIQEL---IRLLN 132
Query: 141 GSRENSLY-----------------NALWVAQGLLRKGSSKTADKRILLFTNEDDPF--G 181
+REN Y + ++R G+ KTA KRI L T+EDDP G
Sbjct: 133 EARENPSYLSETFPPLPDGEKMAMGDVFTSCNWVIRDGAPKTATKRIFLITDEDDPTPSG 192
Query: 182 SIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL------EG 235
AAK + + D GI +E +S + F + FY ++ E
Sbjct: 193 YDTSAAKEKLITSAQTTLTDLTQAGIMVEPFFISTEERSFDIGKFYTSVLNSHMLPTEEE 252
Query: 236 DDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPG-A 294
D AL + +++D+ Q+R KR + I +A G I + Y L+ G +
Sbjct: 253 DGGALPEQISITRIDDLLGQMRFHEVPKRSLFSIGLELAPGFRISVKGYGLVTEQKKGKS 312
Query: 295 ITWLDSVTNHPLKTERS-FICAD------------------------------TGALMQE 323
+ ++D + R+ ++ D +G +
Sbjct: 313 MYFVDMGDRMEVAESRAAYVDEDYQEERDKSEILFGMELGSAAASAGQEDQGASGGGVIR 372
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
P +R G+ + ++ E+ + + L+L GFK S L N++ S F++P +
Sbjct: 373 PVER-----GKRVFYTADEVRGFRTMGLEPGLKLLGFKDRSELAFEDNVKHSVFIYPDEM 427
Query: 383 EVVGSTCIFIALHRSMLRLNRFAV--AFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHM 440
GS F +L +SML+ ++ A+ A ++P A++ Q E G +P G H+
Sbjct: 428 TYSGSKRTFSSLLKSMLKKDKIAIVLALLRRNASPTFCAMLPQAEKQDEAGWNDPAGFHL 487
Query: 441 IYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQ 496
I LP++DDIR +EE RAS+D K A + ++++ LK+ + + NPSL
Sbjct: 488 IPLPFADDIRAAALEEGF-------RASEDVKKAAQSWVEKLCLKNGTYEPDSYPNPSLA 540
Query: 497 RHYAVLQALAL-EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKV 555
H A LQA A EE D +D T+P + M K ++ +K ++ D
Sbjct: 541 FHNAQLQASAFREEYDPTTFEDLTLPKID-MIHKRAGKLIQMWKEALAEDPSSGAVIATA 599
Query: 556 SEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLIS 615
+ A++++ A N A+ + Y + G L ++ V +LK +L + +L +GRK L+
Sbjct: 600 TGATKRKADAGVNDAEVRSMY------ENGWLTKLRVDQLKDFLKSKSLPVSGRKGELVD 653
Query: 616 R 616
R
Sbjct: 654 R 654
>gi|302831133|ref|XP_002947132.1| hypothetical protein VOLCADRAFT_87468 [Volvox carteri f.
nagariensis]
gi|300267539|gb|EFJ51722.1| hypothetical protein VOLCADRAFT_87468 [Volvox carteri f.
nagariensis]
Length = 365
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 146/290 (50%), Gaps = 26/290 (8%)
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNP- 412
L L GFKPLS L+ +H LRP+ F+ P ++ GST FIA+ R+ML RFA+ Y
Sbjct: 78 LVLLGFKPLSCLRPHHCLRPAVFLRPDERAAEGSTRTFIAVWRAMLAEGRFALCRYRRAN 137
Query: 413 SNPRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVK 471
S P+LVAL+ QDE V A G Q +PPG+HMI+LPY DD+R E + T P+ D+
Sbjct: 138 SPPQLVALMPQDEGVDAYGIQTDPPGIHMIFLPYMDDVRYPE---TATGIPPQQPSDQQL 194
Query: 472 KAAALMKRIDLKD----FSVCQFANPSLQRHYAVLQALALEEDDMPEIK----DETVPDE 523
AA + + + + NP LQRHY VL+ALAL E +P D T P
Sbjct: 195 AAAGALVAALNLEAEEPLDLTRVKNPWLQRHYQVLEALALSE-PLPTWSALDDDTTRPRR 253
Query: 524 EGMARPGVVKAVEEFKLS----------VYGDNYDEEGDVKVSEASRKRKAATENAAKEC 573
E +A+E F+ + +G+ + + +KA E A
Sbjct: 254 ELFQSAEAAEAIEAFRQAFPQQAAGGGAGRAAKRKADGEPGPAAVIKAQKA--EAVADAY 311
Query: 574 ANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
+ DW L L ++T +L LYL H L TG+K+ L+ R+ H+ +
Sbjct: 312 SAIDWEGLYRSNGLAKLTKDDLTLYLRRHQLKVTGKKDDLVQRVREHLAQ 361
>gi|242022578|ref|XP_002431717.1| ATP-dependent DNA helicase 2 subunit, putative [Pediculus humanus
corporis]
gi|212517025|gb|EEB18979.1| ATP-dependent DNA helicase 2 subunit, putative [Pediculus humanus
corporis]
Length = 576
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 239/529 (45%), Gaps = 42/529 (7%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDE----VAICFFN 86
+++L+DA KMF + T A+ C +S++ I ++++E +
Sbjct: 39 LLFLIDAREKMF--------KLQLTENKCAMLCCLESIRNTIRKKIFNEEKCYCGVMLLG 90
Query: 87 TRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENS 146
T + N +L+ +F+ + A+ I + D I E + Y G S
Sbjct: 91 TSQNNNPLNLDNIFII-----QDFKLLGAKHILKIDEIIEDVK---NFSYENKFGFESFS 142
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
L +A W++ + R+ S+ +K IL TN+DD ND R M AKD +
Sbjct: 143 LGDAFWLSMHIFRE-KSQQLNKSILFLTNDDDGVTD----QNNDYNRA-MTSAKDMKKNH 196
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
I ++++ L E F FY+ ++ D++ L+++++++ K F +
Sbjct: 197 IFLDVIQLG---ESFDTDKFYSKLLKASQDNVNYVHSKPVSSLKEIENRMNKINFKHVTL 253
Query: 267 KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP-A 325
++ F+I I ++ + L + L TN + T+ +TG ++ +
Sbjct: 254 VKLPFVIGEDFQIGISIHFLAKKVKLPFKVKLSKSTNERVYTKMQMFETETGTVVNDDDI 313
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV 385
+ Q + I F++ EL I LRL GFKP S + + ++P F++P D
Sbjct: 314 LKSQIVGQKEITFNLPELKMISESGKIELRLLGFKPASVITLENFIKPCAFIYPDDYTYK 373
Query: 386 GSTCIFIA-LHRSMLR-LNRFAVAFYGNPSNPRLVALVAQDEIVRA-GGQVEPPGMHMIY 442
GS+ F A L+R + + + S R VAL+ Q+E + G+ G + +
Sbjct: 374 GSSVFFAAFLNRCIAKQVVPICTLCLRKTSACRFVALIGQNECSDSIVGRDLRQGFVVFF 433
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LP+++++RP E++ + RA ++V + A + ++V F NP L+ H++ +
Sbjct: 434 LPFAEEVRPYEDV-----STKRAEPEQV-EIAKKFIKKLKFKYNVECFQNPRLKAHWSAI 487
Query: 503 QALALEEDDMPEIKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEE 550
+ALAL+ + E D T P+ E M AR G + F +VY ++YD E
Sbjct: 488 EALALDLPEPEETNDSTYPNYELMSARAG--DLAKRFTEAVYPNDYDPE 534
>gi|355757528|gb|EHH61053.1| hypothetical protein EGM_18980, partial [Macaca fascicularis]
Length = 445
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 213/455 (46%), Gaps = 42/455 (9%)
Query: 94 QDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQ--YGIVSGSRENSLYNAL 151
+D N+V N+ ++LD P A+ I + D F+ + G + G++ + S L
Sbjct: 20 KDKNSVNFKNIHILQELDNPGAKQILKLDQ----FKGQQGQKCFQGLMGHGSDYSFSEVL 75
Query: 152 WVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM--QRAKDAQDLGISI 209
WV L K K+I+LFTNED+P G ND + +A D +D+GI
Sbjct: 76 WVCAKLFSDVQFKMRYKKIMLFTNEDNPHG-------NDSVKACQASTKADDLRDIGIFF 128
Query: 210 ELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVK-R 268
+L+ L F +S FY D+I + ++ + + KLED+ ++R + K +K
Sbjct: 129 DLMHLKKLGG-FNISLFYRDIISIAKNENPIHFEKSS-KLEDLLQKVRAKEARKLKLKLN 186
Query: 269 ISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-ALMQEPAKR 327
+I+ G+S L AL P + L TN P+KT+ +TG L+ KR
Sbjct: 187 KDIVISVGIS-NLVQKALKPPPIK-----LYRKTNEPVKTKYQTFNINTGNLLLPSDTKR 240
Query: 328 FQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGS 387
Q Y I +E E+K L L FKPL LK +H LRPS F +P + V GS
Sbjct: 241 PQIYGSHQIILEKEETEELKWFDEPALMLMVFKPLVMLKKHHYLRPSLFTYPEESLVNGS 300
Query: 388 TCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLP 444
+ +F AL L A+ Y N P VALV+Q +E+ QV PG +++LP
Sbjct: 301 STLFSALLIECLEKVVIALGRYTPCRNIPPYFVALVSQEEELDDQKIQVTTPGFQLVFLP 360
Query: 445 YSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQA 504
++D+ + + A+ ++V K A+++++ + F NP LQ+H+ L+
Sbjct: 361 FADNEKVM------------ATPEQVGKMKAIVQKLCF-TYRSDSFENPVLQQHFTNLEP 407
Query: 505 LALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
L + + D T+P E M + + V EFK
Sbjct: 408 FTLYLMEAEQAVDLTLPKVEEMNKI-LGSMVNEFK 441
>gi|405122185|gb|AFR96952.1| Ku70 protein [Cryptococcus neoformans var. grubii H99]
Length = 704
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 166/680 (24%), Positives = 284/680 (41%), Gaps = 109/680 (16%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETH--------FHIAVSCIAQSLKTQIINRLY 77
A+++++++ +DA+ M P D TDE+ H A+ Q + ++++
Sbjct: 33 ASRDHILFCIDAAQSMHK---PYPDTTDESGRVVRGRSALHQALDVAQQIQRAKVLSGPD 89
Query: 78 DEVAICFFNT------RKKKNLQDLNAVF----VFNVAEREQLDRPTARFIKEF-----D 122
D V + +N N Q N VF N E ++L + +++ D
Sbjct: 90 DSVGLLLYNVDPSAVAEDPGNYQPGNYVFQTLRTINAEEMKRLAKLMQTAKEQYEAQGDD 149
Query: 123 HIEESFEKEIGSQ-YGIVSGSRENSLYNALWVAQGLLRKGSSK-TADKRILLFTNEDDPF 180
E+ E EI + + + S E ++ N + L R G ++ +KR+ T+ D P
Sbjct: 150 EAVETTEPEILRETFPPIEMSHEMNIANVIQTCNFLFRDGGTQLKGNKRVFWITDNDMP- 208
Query: 181 GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEF---------------KVSH 225
G RT+ D G++ E + PD F K +H
Sbjct: 209 ---PGMNNRQPARTSY---GDLTTYGVAAETFFIDRPDHRFNPNIFWNDLVIKTSPKRTH 262
Query: 226 FYA-----------------DMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR 268
F+ M+ +G + ++ GQ +E+++ + V +
Sbjct: 263 FHVPLKLGKDGEIVIGVSGYSMVSEQGKGASRYVKMRGQVVEEVQSKTEYTSAETGAVLK 322
Query: 269 ISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRF 328
S I G + E A +R + W V ER+ ++++ +R
Sbjct: 323 DSEI---GQAYEFGNEAEVR-NILEPNPWEAHVK------ERAKNQTAVDHILEDDKERR 372
Query: 329 Q------------PYKGENIKFSVQE--LSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPS 374
Q KG Q+ L +I + +++ GF+ S+L+ NL+
Sbjct: 373 QREDEGEDLEEEDDKKGVEKWLGKQKAALPKIVARTRSEIKILGFQAASHLRFQDNLKHP 432
Query: 375 TFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQ 432
F++P+++E GST F AL S L+ NR A+A SN P L+ Q+E + GQ
Sbjct: 433 FFIYPNEEEYTGSTRTFAALLNSCLKYNRHALALCRLRSNHVPEFCVLIPQEEKTSSSGQ 492
Query: 433 VEPPGMHMIYLPYSDDIRPVEELHSD-TDAVPRASDDEVKKAAALMKRIDLK--DFSVCQ 489
PPG H+I LPY D IRP + ++ + P A+++++ A++KR K +
Sbjct: 493 EYPPGFHLIILPYKDSIRPPPKKVTEFLQSPPIATNEQIDVMKAVIKRTRFKAAAYRPEI 552
Query: 490 FANPSLQRHYAVLQALALEEDDMPE-----IKDETVPDEEGM-ARPGVVKAVEEFKLSVY 543
+ NPSL HY LQALA +ED PE D+T+P GM +R G + +EEF +
Sbjct: 553 YPNPSLAYHYDQLQALAFDEDWDPEDPAKQALDKTMPLYGGMHSRAG--EFMEEFNKEI- 609
Query: 544 GDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHN 603
DE K++ +++ KA E + D+ KG L + VQELK + ++
Sbjct: 610 --ESDERAVEKLASPTKRTKADKGTTVNEWDLRNIPDMWKKGTLSQCKVQELKDWAKHYD 667
Query: 604 LSTTG--RKETLISRILTHM 621
+ G +K +I I H+
Sbjct: 668 VPLQGKTKKADIIDVISEHL 687
>gi|302677669|ref|XP_003028517.1| ku70-like protein [Schizophyllum commune H4-8]
gi|300102206|gb|EFI93614.1| ku70-like protein [Schizophyllum commune H4-8]
Length = 661
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 155/651 (23%), Positives = 276/651 (42%), Gaps = 68/651 (10%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAEDQTDET-HFHIAVSCIAQSLKTQIINRLYDEVAIC 83
E ++ +++ +D S M E + +T H A+ Q K +II D+V I
Sbjct: 25 EGKRDVILFCIDCSESMLELYEDPEYEDAQTCHLFTALDAAMQIQKKKIIVGPNDQVGIM 84
Query: 84 FFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKE---IGSQYGIVS 140
FNT ++ + + + +A I+E + +F ++ + ++ V
Sbjct: 85 LFNTTRRGAKGQQGSDIKKGTYLYQPIGPLSAPSIQELIQLLNAFREDNNTLREEFPPVE 144
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
+ ++ + A +LR G+ KTA KR+ L TN+D+P RTT+
Sbjct: 145 -DKYVAMGDVFTSANWILRDGAPKTATKRVFLITNQDNPHPGHGNRQLLTSARTTLV--- 200
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGDD--------LALFMPSAGQKL 249
D G+++E +S D+ F VS FY ++ L DD L + ++
Sbjct: 201 DLAQSGVAVEPFFISTEDKPFDVSKFYRAVLLPNNLVDDDEDHDPSNPSVLNEAISISRI 260
Query: 250 EDMKDQLRKRMFSKRIVKR---ISFIIANGLSIELNTYALIRPTVPGA------------ 294
ED+ Q+R KR R I + I + Y L+ GA
Sbjct: 261 EDLLAQMRFHEVPKRAQFRRANIPLELGQDFVIGVKGYGLVTEQKKGAYRYFAETENGIK 320
Query: 295 -----ITWLDSVTNHPLKTERSFICADTG----ALMQEPAKRFQPY------KGENIKFS 339
+++ T+ + + D G A + + F P GE ++
Sbjct: 321 VAESRTLYVNQHTDREIDKTKILFGMDLGGDKEAAAGKTSSNFDPSVMRLVKAGERPFYT 380
Query: 340 VQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSM 398
+E+ + + + ++L GFK L N++ S F++P + GS F AL RS+
Sbjct: 381 AEEVKKFRTLGLEPGIKLLGFKDADTLAFEDNIKHSHFIYPDELAYSGSKRTFSALLRSL 440
Query: 399 LRLNRFAVA--FYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELH 456
++ N+ + + P A+V Q E G EP G H+I LP++DDIR
Sbjct: 441 VKKNKIGLVRVLTRRNATPTFCAMVPQMEQTDDAGWTEPAGFHLIPLPFADDIR-----Q 495
Query: 457 SDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALAL-EEDDMP 513
+ + RA ++ A + +I +K + + NP+L H LQA A EE D
Sbjct: 496 ATVEKGYRAGRPLMEAAMPFIHKITIKKGGYPPDSYPNPALAYHNEQLQASAFREEYDPS 555
Query: 514 EIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATE-NAAKE 572
E +D+T+P + M + + ++ +K ++ D+ + + V++A KRKA T + A+
Sbjct: 556 EFEDQTLPAYDSMHK-KIGSLIKTWKEALVMDDSADVVEAPVAKAGTKRKADTSVDEAEI 614
Query: 573 CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
A Y D + ++ V +LK +L + +L +G+K LI R+ + K
Sbjct: 615 RAKY------DNDTMSKLRVDQLKEFLKSKSLPVSGKKADLIDRVSEYFDK 659
>gi|296818197|ref|XP_002849435.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839888|gb|EEQ29550.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 608
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 235/533 (44%), Gaps = 71/533 (13%)
Query: 18 NEFY-QEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS----LKTQI 72
N+ Y Q ++++K+ V++ ++ S M + P E ++ + ++ +S ++ +I
Sbjct: 29 NDLYIQGYKSSKDAVLFAIEVSESMLAP--PPESKSKKADKDAPITAALKSAYHLMQQRI 86
Query: 73 INRLYDEVAICFFNTRKKK----NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESF 128
I+ +D + + + T+ K + + + + LD P A +KE +
Sbjct: 87 ISSPHDMMGVLLYGTKSSKFYDEDEEGRGTLPYPHCYLYIDLDVPAASDVKELRALAND- 145
Query: 129 EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAK 188
E S +V ++ N L+ A + ++ + +R+ + T+ D P + K
Sbjct: 146 --EDDSSEILVPSEEPVTMANVLFCANQIFTSKAANFSSRRLFIVTDNDSPHANEKA--- 200
Query: 189 NDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALFMPSAG 246
+ RAKD DLG++IEL P+S P EF S FY D+I D A A
Sbjct: 201 --LRSAATVRAKDLYDLGVTIELFPISRPGAEFDRSKFYDDIIYKASSSDPEAPVYSQAA 258
Query: 247 QKLE-------DMKDQLRKRMFSKRIVKRISFI-----IANGLSIELNTYALIRPTVPG- 293
K + + L + SK I +R F I I + Y + + P
Sbjct: 259 AKSSTSGGDGITLLNSLISSINSKSIPRRALFSNVPLEIGPDFKISVTGYLIFKRQEPAR 318
Query: 294 -AITWLDSVTNHPLKTERSFICADTGALMQE-PAKRFQPYKGENIKFSVQELSEIKRVST 351
WL K + + D+ +++ ++ + GE I F+ +E +E++
Sbjct: 319 SCYIWLAGEQPQIAKGITTQLADDSAREIEKWEIRKAYKFGGEQISFTQEEQAELRNFGE 378
Query: 352 GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN 411
+R+ GFKPLS L + +++ TF++PS++ G
Sbjct: 379 PTIRIIGFKPLSSLPIWASMKHPTFIYPSEE---------------------------GR 411
Query: 412 PSNPRLVALVAQDEIVRAG-GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEV 470
+ P + A++A E + Q+ PPGM ++ LP++DDIR E + T + D V
Sbjct: 412 NAAPVMAAMIAGAEKLDENDTQIIPPGMWILPLPFADDIRQNPETNHIT-----SPDSLV 466
Query: 471 KKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
K +++++ L F ++ NPSLQ HY +LQALAL+ED + +D+T+P
Sbjct: 467 DKMRPIIQQLQLPKGKFDPYKYPNPSLQWHYRILQALALDEDVPEQPEDKTIP 519
>gi|134115190|ref|XP_773893.1| hypothetical protein CNBH3450 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256521|gb|EAL19246.1| hypothetical protein CNBH3450 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 751
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 19/300 (6%)
Query: 336 IKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
++FS +E+S+ + + +++ GF+ S L+ NL+ F++P+++E GST F AL
Sbjct: 440 LQFSNEEVSQFRSMGIEPQIKVLGFQAASQLRFQDNLKHPFFIYPNEEEYTGSTRTFAAL 499
Query: 395 HRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR-P 451
S L+ NR A+A SN P L+ Q+E + GQ PPG H+I LPY D IR P
Sbjct: 500 LNSCLKYNRHALALCRLRSNHVPEFCVLIPQEEKTSSNGQEYPPGFHLIILPYKDSIRPP 559
Query: 452 VEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEE 509
+++ + P A+D+++ A++KR K + + NPSL HY LQALA EE
Sbjct: 560 PKKVAEFLQSPPIATDEQINAMKAVIKRTRFKAAAYRPEIYPNPSLAYHYDQLQALAFEE 619
Query: 510 DDMPE-----IKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRK 563
D PE D+T+P GM +R G + +EEF + DE K++ +++ K
Sbjct: 620 DWDPEDPAKQALDKTMPLYGGMHSRAG--EFMEEFNKEIEN---DERAVEKLAAPTKRGK 674
Query: 564 AATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG--RKETLISRILTHM 621
A E E + D+ KG L + VQELK + +++ G +K +I + H+
Sbjct: 675 AEKETTVNEWDLRNIPDMWKKGTLSQCKVQELKDWAKHYHVPLQGKTKKADIIDVVSEHL 734
>gi|321262224|ref|XP_003195831.1| hypothetical protein CGB_H4420W [Cryptococcus gattii WM276]
gi|317462305|gb|ADV24044.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 752
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 155/300 (51%), Gaps = 20/300 (6%)
Query: 336 IKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
++FS +E+S+ + + +++ GF+ S+L+ NL+ F++P+++E GST F AL
Sbjct: 442 LQFSNEEVSQFRSMGIEPQIKILGFQAASHLRFQDNLKHPFFIYPNEEEYTGSTRTFAAL 501
Query: 395 HRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPV 452
S L+ NR A+A SN P L+ Q+E + GQ PPG H+I LPY D IRP
Sbjct: 502 LNSCLKYNRHALALCRLRSNHVPEFCVLIPQEEKTSSNGQEYPPGFHLIILPYKDSIRPP 561
Query: 453 EELHSDTDAVPR-ASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEE 509
+ ++ P A+D+++ A++KR K + + NPSL HY LQALA EE
Sbjct: 562 PKKVTEFLQSPLIATDEQIDTMKAVIKRTRFKAAAYRPEIYPNPSLAYHYDQLQALAFEE 621
Query: 510 DDMPE-----IKDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRK 563
D PE D+T+P GM +R G + +EEF + D E V+ + KR
Sbjct: 622 DWDPEDPDKQALDKTMPLYGGMHSRAG--EFMEEFNKEIEND----ERAVEKLAGATKRT 675
Query: 564 AATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG--RKETLISRILTHM 621
A E E + D+ KG L + VQELK + +++S G +K +I + H+
Sbjct: 676 KAEETTLNEWDLRNIPDMWKKGTLSQCKVQELKDWAKYYHVSLQGKTKKADIIDLVSEHL 735
>gi|198412477|ref|XP_002122561.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 431
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 215/452 (47%), Gaps = 35/452 (7%)
Query: 8 VFRDD--DEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIA 65
++ DD D E++ E +++ +E VV+ ++ +MF + +E++F ++ I
Sbjct: 5 IYSDDVSDNENEAEVFEQSYGGRESVVFAIECCEEMFDIN----QEDEESYFERIMTSIH 60
Query: 66 QSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE 125
L +II D I FF K V + +Q D P + I E I+
Sbjct: 61 DMLVNKIITSDTDMNGIVFFGVENKTEDGKFPGVRTW-----QQFDVPCVKSIMELREIQ 115
Query: 126 ESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKG 185
K+ +++G ++ E + N LW + L K A+K +++F ++P KG
Sbjct: 116 NIDFKQFENKFGKLA---EYEVSNVLWASHQLFLNCPFKLANKTLVVFPWNENPH---KG 169
Query: 186 AAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG--LEGDDLALFMP 243
N+ + + D + G+ I++ +++F FY + ++ ++ M
Sbjct: 170 --NNNAVKRARAKCGDLHEHGVEIQVFSF---NQDFSYEPFYKHITTDQIQSNEQ---MM 221
Query: 244 SAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTN 303
+ + ++ L ++ + +R+ + + + I + Y + R T + W+D+ TN
Sbjct: 222 NPINAISNLYSFLMRKCYKQRMTR--TRLQIGKYKISVGVYTVARKTTKTSAVWIDNSTN 279
Query: 304 HPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKP- 361
+K + + + TG LM K +Q + G++I F +E++ +K++ + + GF+P
Sbjct: 280 KIVKRQINLVDTSTGEMLMPSDVKLYQTWAGKDIVFEKEEVTSMKQLCDVGITVLGFQPR 339
Query: 362 LSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVA 419
+S +K +++ RP+ F++P D ++ GS+ F AL + L + A+ + ++ R +A
Sbjct: 340 VSTIKPWYHSRPAQFIYPDDSDLKGSSTFFTALLQKCLDKDYVAICRFVPRTSASMRNIA 399
Query: 420 LVAQDEIV--RAGGQVEPPGMHMIYLPYSDDI 449
L+ Q E + Q++P G ++YLP++DD+
Sbjct: 400 LLPQREEIDPETSEQIKPSGFFIVYLPFADDV 431
>gi|71022129|ref|XP_761295.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
gi|46097789|gb|EAK83022.1| hypothetical protein UM05148.1 [Ustilago maydis 521]
Length = 713
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 163/698 (23%), Positives = 285/698 (40%), Gaps = 129/698 (18%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
K+ V++ +DA P M PA T+ + + A+ A ++ ++I+ +D V + FN
Sbjct: 39 KDMVLFCIDAGPSMHRID-PA---TNTSPLYSALKAAASLMQKKLISSPHDHVGVLIFNC 94
Query: 88 RKK-----------KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY 136
K +L +V Q++ P +K H E K + Y
Sbjct: 95 ADTLFHSVKPGEYYKGSYELQSV--------RQVNVPDTYNLKALLHEAELDPKHL---Y 143
Query: 137 GIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
++ + + + G+ ++ KR+ T+ DDP R +
Sbjct: 144 TVLPPAEKQMRIDWALANAGVAVVAAANAGSKRVFWITDNDDPHPMSIDPKATKARRACL 203
Query: 197 QRAKDAQDLGISIELL------PLSPPDE--------EFKVSHFYADMIG---------- 232
+ + + +G+ IE P + E +F+++ FYAD+
Sbjct: 204 DKMNEFRKIGVRIEPFFINSNKPTAASQEPSGSQLTRDFEINKFYADVFAHYDDDRDQDD 263
Query: 233 --------------------LEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI 272
L+G + + + + ++++D + R KR+V I F
Sbjct: 264 DDDSTARRLPRGFSSTAAEQLKGQETKRTLWDSSVRFQELEDDVATRETPKRVVFNIRFE 323
Query: 273 IA-------------------------NGLSIELNTYALIRPTVPG----AITWLDSVTN 303
+A I + Y+L+ T G I D
Sbjct: 324 LAALDPTPESNESDQGEERLPQARTRGRKWQIGIKGYSLVSKTTKGNPVKVIVDDDCGEL 383
Query: 304 HPLKTERSFICADTGALMQE----PAKRFQP---YKGENIKFSVQELSEIKRVST-GHLR 355
+ T + ++ ++G + + PA +F P +G+ + F+ EL IK L+
Sbjct: 384 KEVVTHQHYVDVNSGKPLSKDQVIPAFQFGPSSSLRGQ-VTFTPGELRSIKTFGMLPSLK 442
Query: 356 LHGFKPLSYLKDYH-NLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN 414
L GF+ L + N++ S F++PSD E GS F AL SM+ ++ + + N
Sbjct: 443 LIGFRNRDDLLRFEWNVKHSYFIYPSDSEWKGSRKTFTALLNSMISKDKVGLGLFMPRQN 502
Query: 415 --PRLVALVAQDEIVRAGGQ-VEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDE 469
P VA+V Q+E V A GQ + PGMH+I LPY+DD+R P LH++ A D++
Sbjct: 503 VVPVFVAIVPQEEEVSADGQQLVAPGMHLITLPYADDVRDVPANLLHTED-----AKDEQ 557
Query: 470 VKKAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
V KA A ++R + F+ + NPSL HYAVL A A +E D TVP + +
Sbjct: 558 VDKAVAFIERYQKRQPFNPDHYPNPSLNHHYAVLMATAFQEPVPDTPTDLTVP-QYATIK 616
Query: 529 PGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECA---NYDWADLADKG 585
++++ ++ +++ + V A+ + A T + ++ + + +L G
Sbjct: 617 KRTAHLIQDWHTAI-----NQDPRLNVVSAAASKHAKTSTSVRKTTFEDDSEIMELWQSG 671
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
KL TV ELK + L GRK L+ RI H+ K
Sbjct: 672 KLSAYTVDELKSACDFYRLDKKGRKADLLVRIDEHIRK 709
>gi|170033114|ref|XP_001844424.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873538|gb|EDS36921.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 569
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 236/525 (44%), Gaps = 79/525 (15%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKT 70
D++ E D EF +E ++ L+D S MF+ + + + +F A+ I +K
Sbjct: 9 DNESEDDQEF---GFGGREGLLALIDCSDSMFN------EASGKHNFREALELIEAVMKN 59
Query: 71 QIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQ-----LDRPTARFIKEFDHIE 125
+II D + I +NT D + + V + L P+A I++ +
Sbjct: 60 KIITSDKDLIGIVLYNTEHSPPPPDDSEIETGIVVPKHTAIFMPLASPSADSIRKVINFR 119
Query: 126 ESFEK-EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIK 184
ES + + G ++G S +++ + LW+ L + K I+LFT+ D+P
Sbjct: 120 ESEDLFDFGRKFG---HSNDSNFSDVLWLCSRLFTRCGYKLEQSSIVLFTSNDEPH---- 172
Query: 185 GAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALF-M 242
+A + + + +A+D Q LG+++ L+P+ EF S FY + I D D F
Sbjct: 173 -SAGSYQYQQSYVKARDLQQLGVNLVLVPMV---AEFDGSKFYQEFICTVTDEDPEQFRF 228
Query: 243 PSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVT 302
P + + + +++ +R F K+ + I+F ++ +++ +N Y+L R T
Sbjct: 229 PCYQESRDCLLNRIFRRDFRKKALSHINFQLSEDVALGVNIYSLSRKT------------ 276
Query: 303 NHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPL 362
Q GE I F+V E++ +K++ +RL GFKP+
Sbjct: 277 --------------------------QNIGGEKITFTVDEVTNMKQMLPPGIRLLGFKPM 310
Query: 363 SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYG----NPSNPRLV 418
S + ++LR S F++P + + GST +F AL+ L ++ A PS +L+
Sbjct: 311 SKVSLVNHLRSSLFLYPDENSISGSTTLFRALYEKCLAKHKAAYCMLTMRRKQPS--KLI 368
Query: 419 ALVAQDEIVRAGGQ-VEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALM 477
AL+ Q+ G+ G + ++PY+ DIR ++ L P + ++V +++
Sbjct: 369 ALIPQECCYDDDGEPFRHSGFRIEFIPYAADIRKLDVLERPP---PSVTQEQVDVFKSVV 425
Query: 478 KRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
K+I K F QF NP L Y ++AL + E+ D T D
Sbjct: 426 KKIKFK-FHPSQFDNPVLMTVYTNIEALLFNRAE--EVYDSTKSD 467
>gi|395326731|gb|EJF59137.1| ku70-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 657
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 155/659 (23%), Positives = 279/659 (42%), Gaps = 84/659 (12%)
Query: 21 YQEHEATKEYVVYLVDASPKMFSTT-CPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDE 79
Y ++ ++ +++ +D SP M P + + IA+ Q K +++ D
Sbjct: 21 YSFYDGKRDVILFCIDCSPSMLELREDPRYEDVQTCNLMIALEAAMQIQKRKVLVGPSDS 80
Query: 80 VAICFFNTRKKKNLQDLNA-----VFVFNVAEREQLDRP-TARFIKEFDHIEESFEKEIG 133
V I FNT K+ + A FV+ +D P A+ ++ D E+ +
Sbjct: 81 VGIMLFNTTKRNESGTVGADIKKGTFVYQ--PLATIDVPKVAQLLQLLDEAREN-PGVLR 137
Query: 134 SQYGIVSGSR---ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
++ + R + + WV +R G+ KTA KR+ T+ED+P GAA +
Sbjct: 138 EEFPPMKDKRIPVGDVFTSCNWV----MRDGAPKTATKRVFFITDEDNPH---PGAAISR 190
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---------GLEGDDLALF 241
+ + D G+++E +S ++ F S FY+ ++ + +D +
Sbjct: 191 LMTSARTTLIDLVQAGVTVEPFFISADEKPFDPSRFYSSVLLPTNITDSDDIGDNDGSSI 250
Query: 242 MPSAGQ--KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGA----- 294
+P + +++++ Q+R KR + F +A I + Y LI GA
Sbjct: 251 LPESISIGRIDELLAQMRFHEVPKRAAFSVPFQLAPDFVIGVKGYGLITEQKKGAYRYFA 310
Query: 295 ------------ITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGEN------- 335
+++D + + D GA E KG +
Sbjct: 311 ETDAGVEVVESRTSYVDEEQEEEVDKGQILYGMDLGAPSAEAGDEEGDAKGVDAGTRSVA 370
Query: 336 ----IKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCI 390
+ ++ +E+ + + ++L GFK L N++ S F++P + GS
Sbjct: 371 FGYRVFYTAEEVRAFRTLGLEPGIKLLGFKGRKELAFEDNIKHSFFIYPDEMTFSGSKRT 430
Query: 391 FIALHRSMLRLNRFAV--AFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDD 448
F AL R+M+ + A+ A S+P A++ Q+E V G EPPG H+I LP++DD
Sbjct: 431 FTALLRTMISKKKIAIVLALTRRNSSPIFCAMLPQEEKVDESGWREPPGFHLIPLPFADD 490
Query: 449 IR--PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVC--QFANPSLQRHYAVLQA 504
IR PVE RASD+ + A + ++++K+ S + NP+L H A L+A
Sbjct: 491 IRAAPVERAF-------RASDELKEAARKWIDKLNVKNGSYPPDSYPNPALAYHNAQLEA 543
Query: 505 LALEED-DMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRK 563
A ED D +D T P + M + ++ +K + D + V A KRK
Sbjct: 544 QAFREDFDAEAFEDLTEPKYD-MIHKRAGQLIKAWKEELRED--ESANIVSAPLAGSKRK 600
Query: 564 A-ATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
A + + A+ + Y + G L ++ V +LK +L + + +G+K LI R+ +
Sbjct: 601 ADVSVDEAEVRSKY------EAGALAKLRVDQLKEFLKSKGEAVSGKKADLIDRVCEWL 653
>gi|206598192|gb|ACI15997.1| KU70 protein [Bodo saltans]
Length = 778
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 176/354 (49%), Gaps = 25/354 (7%)
Query: 279 IELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQ-PYKGENIK 337
+ +N Y I TWLD TN + +E + TGA + RF GE +
Sbjct: 418 VIVNIYTPILKCPKPKFTWLDGTTNTGVTSETRLLSKATGAPVAPAELRFSTSVAGEELL 477
Query: 338 FSVQELSEIKRVSTGHLRLHGFKPLSYLKD------YHNLRPSTFVFPSDKEVVGSTCI- 390
FS E E+K++ + + + GF L + K +N+ S F+ + ++ G +
Sbjct: 478 FSKDETIEMKKICSSNGGVRGFTILGFKKSEDAIRFKYNVARSGFLHCTTQKGGGQGALK 537
Query: 391 -FIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPY 445
F+ LHR++ N+ A+A + + N PRLVAL+ + V G H+I +PY
Sbjct: 538 FFVQLHRTLSTQNKVAIAEFVSRDNVAPRLVALLPSKLLHDHPMMDSVTGLGFHLIQIPY 597
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+DD+R +A P +DD++ KA +++++ + ++ V ANP+LQR Y +LQ L
Sbjct: 598 ADDVRSFHPRKQPAEAQP--TDDQITKAKRVIRKLQV-EYDVNAIANPALQRQYKILQQL 654
Query: 506 ALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
AL + ++ D T+PD EGMA+ + ++EF +V +Y + +A++ +A
Sbjct: 655 ALIDPAPVQVDDLTLPDVEGMAK--IAPTLQEFTTAVLPPSYSADMICPQPKAAKPPPSA 712
Query: 566 TENAAKECANYDWADLADKGKLKEMTVQELKLY--LMAHNLSTTGRKETLISRI 617
TE AA D+ DL KG L +T+ L+ Y L+ ++ K L++R+
Sbjct: 713 TEMAA-----IDFDDLESKGTLTSLTMPYLQQYLKLLKEDVQGAKLKHELVARV 761
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 34/206 (16%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAEDQTDETH------FHIAVSCIAQSLKTQIINRLYD 78
+A ++ V++LVD S MF AE + T F A+ C + +++ D
Sbjct: 36 KAERDAVLFLVDCSSSMFRKIESAEMDAEATPGSYLSPFTRAIQCALSFYQEKVVTSDKD 95
Query: 79 EVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFD----------HIEESF 128
V++ +NTRKK NL + V+VF+ + D P A ++E ++ + F
Sbjct: 96 LVSLLLYNTRKKLNLYEFQGVYVFH-----EFDCPGAARVQELQVLSRAGSGDVNVHKEF 150
Query: 129 EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTAD-KRILLFTNEDDPFGSIKGAA 187
+ IG R L A W AQ + S+ +R+ LFT+ DDP I
Sbjct: 151 SEHIGH-----GAPRAVLLSEAFWAAQHMFHNLRSRAIGFRRVFLFTDCDDPCAGIP--- 202
Query: 188 KNDMTR-TTMQRAKDAQDLGISIELL 212
M R R KD D G+++E+
Sbjct: 203 ---MERERCFARMKDLHDAGVALEVF 225
>gi|58271720|ref|XP_573016.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338810369|sp|P0CO51.1|KU70_CRYNB RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|338810370|sp|P0CO50.1|KU70_CRYNJ RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|57229275|gb|AAW45709.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 560
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 219/491 (44%), Gaps = 59/491 (12%)
Query: 122 DHIEESFEKEI-GSQYGIVSGSRENSLYNALWVAQGLLRKGSSK-TADKRILLFTNEDDP 179
D E+ E EI + + S E ++ N + L R G ++ +KR+ T+ D P
Sbjct: 78 DETVETTEPEILRKTFPPIEESHEMNIANVIQTCNFLFRDGGTQLRGNKRVFWITDNDMP 137
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLA 239
G RT+ D G++ E + PD F + F+ D++ E D
Sbjct: 138 ----PGMNNRQPARTSY---GDLTTYGVTAETFFIDRPDHRFNPNIFWNDILDREAIDYN 190
Query: 240 LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLD 299
P + L + D L K + K KR F + ++L I V G
Sbjct: 191 DDQPDP-EGLSSLAD-LMKDLVIKTSPKRTHFHVP----LKLGKDGEIVIGVSGCS---- 240
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIK--FSVQELSEIKRVSTGH---- 353
+ ++ G + A R+ +G+ ++ S E + K +++G
Sbjct: 241 -------------MVSEQG----KGASRYVKMRGQVVEEVQSKTEYTSAKSLNSGQWGSN 283
Query: 354 -LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNP 412
+++ GF+ S L+ NL+ F++P+++E GST F AL S L+ NR A+A
Sbjct: 284 PIKVLGFQAASQLRFQDNLKHPFFIYPNEEEYTGSTRTFAALLNSCLKYNRHALALCRLR 343
Query: 413 SN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR-PVEELHSDTDAVPRASDDE 469
SN P L+ Q+E + GQ PPG H+I LPY D IR P +++ + P A+D++
Sbjct: 344 SNHVPEFCVLIPQEEKTSSNGQEYPPGFHLIILPYKDSIRPPPKKVAEFLQSPPIATDEQ 403
Query: 470 VKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALEEDDMPE-----IKDETVPD 522
+ A++KR K + + NPSL HY LQALA EED PE D+T+P
Sbjct: 404 INAMKAVIKRTRFKAAAYRPEIYPNPSLAYHYDQLQALAFEEDWDPEDPAKQALDKTMPL 463
Query: 523 EEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADL 581
GM +R G + +EEF + DE K++ +++ KA E E + D+
Sbjct: 464 YGGMHSRAG--EFMEEFNKEIEN---DERAVEKLAAPTKRGKAEKETTVNEWDLRNIPDM 518
Query: 582 ADKGKLKEMTV 592
KG L ++++
Sbjct: 519 WKKGTLSQLSI 529
>gi|388856813|emb|CCF49600.1| related to ATP-dependent DNA helicase II, 70 kDa subunit [Ustilago
hordei]
Length = 716
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 164/697 (23%), Positives = 289/697 (41%), Gaps = 123/697 (17%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
K+ V++ +DA P M + + + + A+ A ++ ++I+ +D V + FN
Sbjct: 39 KDMVLFCIDAGPSMHRI----DPTANTSPLYFALKAAASLMQKKLISSPHDHVGLLIFNC 94
Query: 88 -----RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGS 142
R K + + + Q++ P +K H E K + + I+ +
Sbjct: 95 AETLFRSAKPGEYYKGSY--ELQSVRQVNVPDTYNLKALLHEAEHDPKHLQT---ILPPA 149
Query: 143 RENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDA 202
+ + G+ + KR+ T+ DDP R + + +
Sbjct: 150 EKQMRIDWALANAGVAMVAAPNAGSKRVFWITDNDDPHPMSVDPKATKARRACLDKMDEF 209
Query: 203 QDLGISIELLPLSPPDEEF---------------KVSHFYADMIG-----LEGDDLALF- 241
+G+ IE ++P F +++ FYAD+ LE D+ + +
Sbjct: 210 SKIGVRIEPFFINPNQPAFTGASQASGSDLTRGFEINKFYADVFSHYDNDLEDDEDSAYP 269
Query: 242 --MPSA----------GQ-----------KLEDMKDQLRKRMFSKRIVKRISFIIA---- 274
+P A GQ + +++++ + R KR+V I F +A
Sbjct: 270 RRLPKAFGRTAAEQLKGQEVKRSLWDSAVRFQELENDIATRETPKRVVFNIRFELAALDP 329
Query: 275 -----------NG--------------LSIELNTYALIRPTVPG----AITWLDSVTNHP 305
NG I + Y+L+ T+ G I D
Sbjct: 330 PPAPSTEGSEANGEGAKLPQARSRGRKWQIGVKGYSLVCKTMKGNPVKVIVDDDCGELKE 389
Query: 306 LKTERSFICADTGALMQE----PAKRF---QPYKGENIKFSVQELSEIKRVST-GHLRLH 357
+ T + +I ++G + + PA +F +G+ + F+ QEL IK L+L
Sbjct: 390 VVTHQHYIDVNSGQPLSKEQVIPAFQFGTSSSLRGQ-VTFTPQELRSIKTFGMLPCLKLI 448
Query: 358 GFKPLSYLKDYH-NLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
GF+ L + N++ + F++PSD E GS F AL +SM++ + + + N
Sbjct: 449 GFRDKDELLKFEWNVKHAYFIYPSDIEWKGSRKTFTALLQSMVKKGKVGLGLFMPRQNVV 508
Query: 415 PRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVK 471
P VA+V Q+E + G Q+ PGMH+I LPY+DD+R P LH++ A+ ++
Sbjct: 509 PVFVAIVPQEEELDEEGQQLVAPGMHIITLPYADDVRDIPTNLLHTED-----ANYTQID 563
Query: 472 KAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEEDDMPEI-KDETVPDEEGMARP 529
KA A ++R K F+ + NPSL HY VL A A +E +PE D TVP
Sbjct: 564 KAIAFIERYQKKQPFNPDHYPNPSLNHHYKVLMATAFQE-PLPETPTDLTVPQY------ 616
Query: 530 GVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWAD---LADKGK 586
G ++ + + D + + + + A+ ++ T + ++ + D + L +KGK
Sbjct: 617 GTIRKRTAHLIQAWHDEINGDPRLSMVSAAASKQPKTSTSVRKTSFEDDTEIMGLWEKGK 676
Query: 587 LKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
L TV+ELK + L GRK L+ RI H+ K
Sbjct: 677 LSAYTVEELKSVCEFYRLDKKGRKGDLLVRIDEHIRK 713
>gi|347968374|ref|XP_312232.5| AGAP002690-PA [Anopheles gambiae str. PEST]
gi|347968376|ref|XP_003436213.1| AGAP002690-PB [Anopheles gambiae str. PEST]
gi|333468033|gb|EAA08137.5| AGAP002690-PA [Anopheles gambiae str. PEST]
gi|333468034|gb|EGK96800.1| AGAP002690-PB [Anopheles gambiae str. PEST]
Length = 624
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 238/521 (45%), Gaps = 45/521 (8%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
A + ++ VD + MF E E+ F + I ++ +++ D V + F+
Sbjct: 22 AGRSGLILTVDCASYMFER----EGGESESRFVEVLHIIEAMMRNKVVTNETDLVGVVFY 77
Query: 86 NTRKKKNLQDLNAVFVFNVAERE-----QLDRPTARFIKEFDHIEESFEK-EIGSQYGIV 139
NT+ + + VA R+ L + I++ + ES + ++YG
Sbjct: 78 NTKHNPAPETEEELQPGLVAPRQCAIYLPLGATSVEMIRKVRGMRESDDLFGFDAKYGHA 137
Query: 140 SGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
G+ S+ N LW+ + K A I+LFT+ D P S + + + A
Sbjct: 138 QGT---SMSNVLWLCSRMFSHCGYKLAQSTIVLFTSNDQPHDSSSSEYQQALVK-----A 189
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMIG--LEGDDLALFMPSAGQKLEDMKDQLR 257
+D Q I +EL+P+S F+ FY + + LE + P Q E + +L
Sbjct: 190 RDLQQKEIFVELVPMS---GSFECGKFYKEFLCTVLEEELDEFECPVYEQSKERLLHRLF 246
Query: 258 KRMFSKRIVKRISFIIANGLSIELNTYALIR-PTVPGAITWLDSVTNHPLKTERSFICA- 315
R + KR + I + +++ +S+ +N Y+L R P P + L + TN + ++R + +
Sbjct: 247 VRSYKKRSIAGIKWHLSDDVSLAVNVYSLRRRPRYPKKVRLLRT-TNEVIVSKRVHMSST 305
Query: 316 --------DTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKD 367
DT L+ ++ GE + F +E++++K++ +RL GFKP S +K
Sbjct: 306 FSDEREEEDTKVLLPGEQRKSIAIGGEKVSFKPEEVAQMKQLLPPGIRLLGFKPASVIKM 365
Query: 368 YHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYG----NPSNPRLVALVAQ 423
++LR S F++P++ + GST ++ AL+ L N+ A+ PS +LVALV Q
Sbjct: 366 TNHLRSSLFLYPNESYINGSTTLYRALYEKCLEKNQVAICMLTMRRKQPS--KLVALVPQ 423
Query: 424 DEIVR--AGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRID 481
E+ G G + ++P++ DIR + L A P +D++ ++K++
Sbjct: 424 TELAHDPLGEADRHCGFRVDFIPFAGDIRKLPFLEESATA-PEVTDEQTDLFKKMIKKVK 482
Query: 482 LKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
K F +PS Q + +++L + +D E+ D T PD
Sbjct: 483 FKFHPT-HFEDPSSQNLFINIESLVFDVEDA-ELFDSTRPD 521
>gi|308807210|ref|XP_003080916.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
gi|116059377|emb|CAL55084.1| putative ATP-dependent DNA helicase II (ISS) [Ostreococcus tauri]
Length = 540
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 215/466 (46%), Gaps = 62/466 (13%)
Query: 205 LGISIELLPLSPPDEEFKVSHFY----ADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRM 260
LG SIE+L L+ D EF S FY A+ G + + AL + G +L+ ++ L+K
Sbjct: 80 LGQSIEVLSLTR-DGEFDSSIFYDKFTAEHCGAKAGERALVVVRDGMELQ--REFLKKSR 136
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGAL 320
+R+ + +++ +SI + Y+L+ + +D ++ E+ F+ A TGA
Sbjct: 137 KRRRLRQTELWLVPGKISIPVGVYSLVSEAKKSSAILVDGKDLGEIRREQIFVDAATGAQ 196
Query: 321 MQEPAKRFQPYKGENIKFSVQELSEIKRVST-------GHLRLH--GFKPLSYLKDYHNL 371
+++P K F + G+ + F+ +EL++IK+V G + H GF + L
Sbjct: 197 IEKPTKSFVEFDGKELVFTNKELAKIKQVKVKGMPDEKGAVGFHLVGFIDAKRITRDLCL 256
Query: 372 RPSTFVFPSDKEVVGSTCIFI-ALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQ----- 423
+ S F+ +K C + AL R+ N+ A+ Y + R VAL+ Q
Sbjct: 257 KKSHFIAGEEK-----GCAAVNALIRACDVENKVAICAYVRAKSAGFRYVALLPQLAPHV 311
Query: 424 --------DEIVRAGGQVEPP-GMHMIYLPYSDDIRPVEELHSDTD-AVPRASDDEVKKA 473
D I R ++PP G H+ YLP+ DD+R E + PRA+ +++ A
Sbjct: 312 EPGLGDADDAIAR----LDPPEGFHVFYLPFRDDLRHPESVAGSVKKPAPRATKEQIDAA 367
Query: 474 AALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVK 533
+++ I L + Q NP+LQ HY VL+ ALE + M + D+T P + AR GV
Sbjct: 368 RNVVEAIRLTGWHPKQTPNPALQTHYRVLEMCALERNVMEPVHDDTEPALDEWARVGVPA 427
Query: 534 AVEEFKLSVYG-----DNYDEEG--DVKVSEASRKRKAATENAAKECA-----------N 575
+ ++ +G D++ G +V V KRK + ENA +
Sbjct: 428 LLADYDDKCFGASRAIDDWHGVGAPNVLVPVVGDKRK-SIENAGTRAKRSVVVMHILPEH 486
Query: 576 YDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
DL + L MT + LK + AH LS G K LI R+ +H+
Sbjct: 487 VHCIDLVKRNALSTMTGEALKHFCAAHGLSAGGTKAQLIERVDSHV 532
>gi|73586779|gb|AAI03219.1| XRCC6 protein [Bos taurus]
Length = 331
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 158/317 (49%), Gaps = 29/317 (9%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF ++D+ + T F +++ CI +II+ D +A+ F+
Sbjct: 31 SGRDSLIFLVDASRAMFE----SQDEDELTPFDMSIQCIRSVYTNKIISSNRDLLAVVFY 86
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE-----ESFEKEIGSQYGIVS 140
T+K KN + ++V ++LD P + ++E D + + FE +IG
Sbjct: 87 GTKKDKNSVNFKNIYVL-----QELDNPGVKRVQELDKFKGQEGKKYFEDQIGH------ 135
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
GS + SL LWV L K + KRI+LFTNEDDP G +AK RT +A
Sbjct: 136 GS-DYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDDPHGD--DSAKASRART---KAG 189
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRM 260
D +D GI ++L+ L F S FY D+I E +D+ + + KLED+ ++R +
Sbjct: 190 DLRDTGIFLDLMHLKKRG-GFDTSLFYRDVIIAENEDIGIHFEESS-KLEDLLRKVRAKE 247
Query: 261 FSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA- 319
KR++ R+ + +++ + Y +++ L TN P+KT+ +TG+
Sbjct: 248 TRKRVLSRLKLKLNKDVTLTVGIYNMVQKAYRPPPVRLYRETNEPVKTKTRTFNVNTGSL 307
Query: 320 LMQEPAKRFQPYKGENI 336
L+ KR Q Y I
Sbjct: 308 LLPSDTKRSQTYSHRQI 324
>gi|392578958|gb|EIW72085.1| hypothetical protein TREMEDRAFT_26590 [Tremella mesenterica DSM
1558]
Length = 735
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 161/303 (53%), Gaps = 31/303 (10%)
Query: 336 IKFSVQELSEIKRVS--TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
++F+ E++E++ + TG +++ GF+ LK N+R S F++P + GST F A
Sbjct: 442 LQFTSSEVAELRSLGLPTG-IKILGFQSPQNLKFDENIRHSFFLYPDESTYSGSTRTFAA 500
Query: 394 LHRSMLRLNRFAVAF--YGNPSNPRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIR 450
L +S L+ NR A+A + S P L+ Q+E + GGQ +PPG H+I LPY DDIR
Sbjct: 501 LLKSCLKYNRHALALCRFKRNSTPEFAVLIPQEETFTKEGGQDQPPGFHVIILPYRDDIR 560
Query: 451 PVEELHSDTDAVPRASDDEVKKAAALMKRIDLK--DFSVCQFANPSLQRHYAVLQALALE 508
+ +D + A++ + + + ++KR+ +K + + NPSL HYA +QALA E
Sbjct: 561 GAPKNMTDNLS---ATERQAQLMSNIVKRLRIKAGHYRSEVYPNPSLAYHYAQIQALAFE 617
Query: 509 EDDMPEIK---DETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA 565
ED P D+TVP GM + ++E+ +S+ DE ++ A ++ A
Sbjct: 618 EDFDPSTATDLDKTVPKYRGMHK-AAGDFMKEWNMSI---REDERAVESLTMAHKRSTAV 673
Query: 566 TENAAKECANYDWADLAD---KGKLKEMTVQELKLYLMAHNLSTTGR-KETLISRILT-H 620
E+ D AD+A KG+L ++ VQELK Y +S G+ K+ I ILT H
Sbjct: 674 DED--------DLADVAGAFAKGELTKLKVQELKDYAKFKKISLEGKTKKAEIIEILTAH 725
Query: 621 MGK 623
+ +
Sbjct: 726 LAQ 728
>gi|294874809|ref|XP_002767109.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
gi|239868537|gb|EEQ99826.1| ku p70 dna helicase, putative [Perkinsus marinus ATCC 50983]
Length = 675
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 159/680 (23%), Positives = 290/680 (42%), Gaps = 100/680 (14%)
Query: 7 DVFRDDDEESDNEFYQEHEATKEYVVYLVDAS--PKMFSTTCPAEDQTDETHFHIA---- 60
D F DE D+ + +++ V++L+D S +F+ P +
Sbjct: 23 DAFDHFDEVEDDS----QKKSRDAVIFLLDVSNVDTLFTPEAPVAGDGQGLYGSGEASGR 78
Query: 61 -VSCI-------AQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDR 112
SCI A ++++II R D + +NT D+N + + V + L +
Sbjct: 79 RTSCINNVLETLANLMRSKIIGRPEDMTGLILYNTAGA----DVNPMELAGVTVVQDLQQ 134
Query: 113 PTARFIKEFDHIEESFEK-EIGSQY--GIVSGSRENSLYNALWVAQGLLRKGSSK-TADK 168
P+A I+E + + ++ E ++ G S S +L+NA WVA + + ++K +
Sbjct: 135 PSASRIREILDLAVTLDRAEFDRRWRKGPPSISPAFALHNAFWVASNIFQSHAAKGNIGR 194
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDE--EFKVSHF 226
R+ + TN+D+P GS + +M + A D I + +L ++ +E F V +
Sbjct: 195 RVYVITNDDNPSGSPQERKAAEMKALDV----GANDTDIDLAVLGINSSEEAQRFDVMKY 250
Query: 227 YADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKR--ISFIIANGLSI 279
+A++I L E D F+ + +ED+ +R++ + R + R ++F A
Sbjct: 251 WANVIPLPDEVEESRDPKKFLENTRGIMEDLATVIRRKEYKVRSLNRCNLTFAGAPDYVA 310
Query: 280 ELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQE--PAKRFQPYKGENIK 337
+ Y ++ + +L ++ LK+E +I D GA++ + + + GE++
Sbjct: 311 AVQVYCHVKEAITPHPVYLHPESHKLLKSETRWINEDNGAMLDRDTEVRTYVDFGGEHVP 370
Query: 338 FSVQELSEIKRVST-------------------------------GHLRLHGFKPLSYLK 366
+ +++ ++K T G L + GFK LK
Sbjct: 371 ITREDVVKMKSFKTDENDRDRSNMIAVPPLGGEGGQEGAEEEVISGSLEVIGFKSRRKLK 430
Query: 367 DYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ- 423
H + F++P + + GS + AL M + + A + +N P AL Q
Sbjct: 431 FQHRIGHGYFLYPHEGRITGSKRLVEALCCRMAKREKVAFVRFVARANAQPIFGALSPQM 490
Query: 424 -DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD--DEVKKAAALMKRI 480
DE + G G+ ++ LP++DDIR +E + D V + +++ A ++++
Sbjct: 491 PDEASQTSG-----GLVLLPLPFADDIRSLELPGTSVDEVISQEEQKQQIEAAKSIIRGF 545
Query: 481 DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPE-IKDETVPDEEGMARPGVVKA--VEE 537
+ +S NPSL+ YA L+ALAL D + ++D +P+E R G + VE
Sbjct: 546 RISHWSPYSIDNPSLKLFYAGLEALALGGDLARDAVQDLLLPNE----RKGELAKDHVEA 601
Query: 538 FKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKL 597
+K ++ D D+ A R R A D G L +TV +LK
Sbjct: 602 WKQTLGVD------DLSSPPAKRPRAAEPFTMGLAVVRAKVLD----GTLSRLTVSQLKD 651
Query: 598 YLMAHNLSTTGRKETLISRI 617
L ST G+K+ LI RI
Sbjct: 652 ILREQRQSTNGKKQELIDRI 671
>gi|402587760|gb|EJW81695.1| hypothetical protein WUBG_07395, partial [Wuchereria bancrofti]
Length = 260
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 117/198 (59%), Gaps = 10/198 (5%)
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
GE + S E+ +++R++ + L GFKPLS LK H++R S FV+P +K+++GST ++
Sbjct: 20 GEVVNLSTDEVEKLRRLTPPGIVLLGFKPLSCLKITHHVRSSQFVYPLEKDILGSTRMYR 79
Query: 393 ALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVE------PPGMHMIYLP 444
L+ ++ + + Y +N P+LVALV Q + + E PG H+IYLP
Sbjct: 80 TLYEVCMKQRKMIICRYTQKANVPPKLVALVPQASVAEDSSKDEFNSKFRYPGFHLIYLP 139
Query: 445 YSDDIRPVEELHSDTDA-VPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQ 503
+++D R E + D P AS ++++ A L+K++ F +F NP LQ+HY V++
Sbjct: 140 FTEDKRDFSEQMTHPDGEWPAASKEQIEVAEKLVKKLTSGYFPE-KFYNPVLQKHYKVVE 198
Query: 504 ALALEEDDMPEIKDETVP 521
ALAL+ D++ E++D+ P
Sbjct: 199 ALALDCDEIAEVQDQIQP 216
>gi|393242090|gb|EJD49609.1| Ku DNA-binding complex, Ku70 subunit [Auricularia delicata
TFB-10046 SS5]
Length = 662
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 150/273 (54%), Gaps = 21/273 (7%)
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFA--VAFYGN 411
L+L GFK + L+ N++ S F++P++ GST F AL + + + ++FA V
Sbjct: 394 LKLLGFKDRTELRFEDNVKHSLFIYPNESAFNGSTRTFAALLQVLAKKDKFALVVGITRA 453
Query: 412 PSNPRLVALVAQDEIV-RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEV 470
S+P A++ Q+E++ +AG Q+ PPG H+I LP++DDIR S T A+ DE+
Sbjct: 454 NSSPAFYAMIPQEEVLDKAGAQIVPPGFHLIVLPFADDIR------SATVESAEAASDEL 507
Query: 471 KKAA-ALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEED-DMPEIKDETVPDEEGM- 526
K AA AL+ ++++K + +F NP+L+ HY LQALA +E D + D + P + +
Sbjct: 508 KDAARALINKLNVKSGYDPKKFPNPALKLHYEQLQALAFDEPYDFEKFDDPSAPPYDVIH 567
Query: 527 --ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADK 584
A P +VK +K ++ D E+ +KV+ ++ A + + A+ + AD
Sbjct: 568 QRAGPLLVK----WKEALDEDPASEK--IKVTATGGTKRKAAASTVGDVADAEIRSRADA 621
Query: 585 GKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G L ++ V +LK +L + S +G+K L RI
Sbjct: 622 GTLDKLKVDQLKAFLRSKGQSVSGKKADLTDRI 654
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 137/291 (47%), Gaps = 27/291 (9%)
Query: 7 DVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQ 66
+VF DD+EE + Y + TK+ V++ +DAS M ++ ++H A+ Q
Sbjct: 11 NVFDDDEEEELQQRY--YGGTKDTVLFCIDASESMHEPHEDEDEGVTKSHLQAALEAALQ 68
Query: 67 SLKTQIINRLYDEVAICFFNTRKKKNLQDLNA-VFVFNVAEREQLDRPTARFIKEFDHIE 125
K +I++ D + I +NT K + +DL +V +Q+ + + I+E ++I
Sbjct: 69 VAKRKIMSGPSDHIGIMLYNTEDKSS-EDLKPHTYVL-----QQIAPLSIQSIRELNNIV 122
Query: 126 ESF---EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGS 182
+ + + S + +G R L + ++R ++KT KR+ L TNEDDP
Sbjct: 123 QDALDDPETLRSSFPPNTGDRV-PLGDVFSSCNWVMRYNAAKTGTKRVFLITNEDDPH-- 179
Query: 183 IKGAAKNDMTRTTMQRAKDAQDL-GISIELLP--LSPPDEEFKVSHFYADMIGLEG--DD 237
KN + T + + QDL + +E+LP + ++ F V+ FY ++ E D
Sbjct: 180 ----PKNSILMGTAKV--NLQDLRQVGVEVLPFFIGSDEKPFDVNKFYTQVLQREDAPDT 233
Query: 238 LAL-FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI 287
A+ +P +D+ D+L+ R +KR I + G +I + Y LI
Sbjct: 234 EAVPTIPDVVTGFQDLIDKLQVRESAKRAQFSIPLHLGKGFTIGVKGYGLI 284
>gi|340385866|ref|XP_003391429.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Amphimedon queenslandica]
Length = 258
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 149/270 (55%), Gaps = 19/270 (7%)
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNP 415
GF+P S +K +H ++P+ F++P + V GST +F L R + AV Y N S P
Sbjct: 2 GFRPKSKMKMHHYIKPANFIYPDETTVSGSTKLFSVLLRRCISREVVAVCKYIPRNNSPP 61
Query: 416 RLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAA 474
VALV Q +E+ + Q+ PPG H+I+LP+S+DIR ++ D +P+AS +++ KA
Sbjct: 62 IFVALVPQEEELDDSSIQISPPGFHVIFLPFSEDIRSLDL----PDEMPKASHEQIDKAK 117
Query: 475 ALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPGVVK 533
++K++ +F + +Q+HY VL+ALALE ++ EI D TVPD + R G K
Sbjct: 118 EIIKKLSF-NFQI-------IQKHYRVLEALALEHEEEEEITDLTVPDAAQINKRAG--K 167
Query: 534 AVEEFKLSVYGDNYDEEGDV-KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTV 592
A++EF +V+ D +D E + K ++ A AK D +A G L ++T+
Sbjct: 168 AIDEFMKAVFPDGFDPEAKITKRKASASTAAAGGAKKAKTDEPVDVESIAKNGTLGKLTI 227
Query: 593 QELKLYLMAHNLSTTGRKETLISRILTHMG 622
LK YL + G+K+ LI I H+G
Sbjct: 228 PVLKEYLKSVGKKAAGKKQDLIDAINEHLG 257
>gi|361124336|gb|EHK96436.1| putative ATP-dependent DNA helicase II subunit 1 [Glarea lozoyensis
74030]
Length = 385
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 168/334 (50%), Gaps = 26/334 (7%)
Query: 299 DSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHG 358
DS T +K + S I D + + K+ + G + F+ +E E+K + LR+ G
Sbjct: 56 DSPTVAAIKYQNSTIGKD---VQKAEIKKAYKFGGAQVLFTPEEQKELKSYGSPILRIIG 112
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPR 416
FKP + L + +++ STF++PS+ + VGST +F AL + +L+ + +A+Y N + P
Sbjct: 113 FKPQNMLPFWASVKKSTFIYPSEDDYVGSTRVFAALWKKLLKDKKMGIAWYVARNNATPL 172
Query: 417 LVALVAQDEIVRAG---GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
LVA++ E G QV P G+ + +P++DDIR + EL + A P DE++K
Sbjct: 173 LVAILPSQERFEEGPGSTQVIPAGLWLYPIPFADDIRSLPELPAPVVA-PDELIDEMRK- 230
Query: 474 AALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD--------E 523
+++++ L + ++ NPSLQ HY +LQA+ALEED D+T+P
Sbjct: 231 --IVQQLQLPKARYDPSKYPNPSLQWHYKILQAMALEEDVPESPDDKTIPKYRQINNRAG 288
Query: 524 EGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLAD 583
E + G + A L D++ V ++K K ++ + D
Sbjct: 289 EFINNWGKILAESTKVLKTMKHELDDDD---VGPPAKKVKVKAQSLEDMSVDEVKKAARD 345
Query: 584 KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
G L + TV +LK +L + LST G+K L+ RI
Sbjct: 346 NG-LTKHTVTDLKHWLASKGLSTAGKKTDLLERI 378
>gi|384487999|gb|EIE80179.1| hypothetical protein RO3G_04884 [Rhizopus delemar RA 99-880]
Length = 572
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 147/638 (23%), Positives = 272/638 (42%), Gaps = 111/638 (17%)
Query: 11 DDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKT 70
+D EE D E Y + KE +++++D +P MF +D+ + A I S+ +
Sbjct: 16 EDQEEKDTEQYNQ----KECILFVIDCNPTMF-----IKDEKGDIPVKSAFEKIRSSMLS 66
Query: 71 QIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEK 130
+++N+ D+V I F TR+K+N D +V+V + +D P A IKE D F +
Sbjct: 67 KVLNQPTDQVGIVLFGTREKQNATDNESVYVL-----QTIDIPDASRIKEID----GFIQ 117
Query: 131 EIGSQYG-IVSGSRENSLYNALWVAQGLL--RKGSSKTADKRILLFTNEDDPFGSIKGAA 187
I + + S E + + WV R + K + KR+ L TN D+P +
Sbjct: 118 NISTLHDKYRSIDWEFPMSDLFWVCSDAFFGRFSAPKYSAKRMFLITNNDNPHQN----- 172
Query: 188 KNDMTR-TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAG 246
ND R +++QRAKD G+ I L L ++ F S FY ++ DD S
Sbjct: 173 -NDAIRQSSVQRAKDLITTGVEIRLFGLQKDNKPFNPSLFYNAIL----DDPTSDSFSCH 227
Query: 247 QKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI---RPTVPGAITWLDSVTN 303
KLE ++ ++ + R + +++ LSI + Y +I R + +
Sbjct: 228 PKLEQLEAIVKSKRAKSRSQFHLPLKLSDHLSIGVTGYNMIIEQRISTAKYFYTAEDEVK 287
Query: 304 HPLKTERSFICADTGALMQEPAKRFQ-----PYKGENIKFSVQELSEIKRVSTGHLRLHG 358
+ T R +IC DT +P R Y GE I FS +EL +I+ +S + L G
Sbjct: 288 EAIGTTR-WICVDTN----QPLTRMDIDYAFNYGGEKIIFSKKELEDIQTLSEPGILLLG 342
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLV 418
F+ + L+ ++ + F++P D V +T I A ++ FY
Sbjct: 343 FRDIKELEPHYQVTHPYFIYPDD--TVNNTKIVKAKDGNLF--------FYKK------- 385
Query: 419 ALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMK 478
G + D + + + ++ A ++
Sbjct: 386 ------------------GKYTT---------------QDCCSYTSTNQEAIETAKEVVN 412
Query: 479 RIDLKD-FSVCQFANP-------SLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPG 530
++ +++ F ++ NP +++ H ++Q +ALE + PE+ D +P+ E +
Sbjct: 413 KLYMREGFDPNRYENPCKYYADNNIRNHNNMIQTIALETEFEPEV-DTIIPNYE-LIENE 470
Query: 531 VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAK-----ECANYDWADLADKG 585
+V ++ FK V DN EE + + +KRK ++ + + +L ++G
Sbjct: 471 LVSVIDNFKEQVGLDNITEEELLSFA-VGQKRKVIDQDLSDSYKKLKLEGQSVENLWEQG 529
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
+L ++T LK +L + + K L++++ ++ K
Sbjct: 530 QLTKLTNDSLKNFLKENGVQPKKVKADLVAQVSEYLSK 567
>gi|353240017|emb|CCA71905.1| related to ATP-dependent DNA helicase II, 70 kDa subunit
[Piriformospora indica DSM 11827]
Length = 679
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 20/305 (6%)
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
P +R Q + I ++ +++++ + + +++ GFK L N++ S F++P+D
Sbjct: 384 PDERGQVIQKTPIYYTKEDVTKFRTLGMEPGIKILGFKDADTLVFEDNIKHSYFLYPNDT 443
Query: 383 EVVGSTCIFIALHRSMLRLNR--FAVAFYGNPSNPRLVALVAQDEIV-RAGGQVEPPGMH 439
GST F AL +M+ + A+ + S+P A+V Q+E++ G Q PPG H
Sbjct: 444 VYKGSTAAFGALMSAMVTKGKIGLALGLFRRNSSPYFYAMVPQEEVLDEDGAQERPPGFH 503
Query: 440 MIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDL-KDFSVCQFANPSLQRH 498
MI LP++DDIR + ++ RASD+ V+ AAA +K++ + K + + NP+L
Sbjct: 504 MIPLPFADDIRAAPDA---AESSLRASDNLVQAAAAWIKKVRIQKGYVPDAYPNPTLGLF 560
Query: 499 YAVLQALAL-EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSE 557
Y+ LQA+AL EE D + D T P E + K VE++K + + +
Sbjct: 561 YSQLQAMALREEFDAEQFSDRTAPQLESIFNRAGAK-VEQWKEVL---EKEPNAETTFLT 616
Query: 558 ASRKRKA-ATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISR 616
+S KRKA T N + +Y + L +MTV LK +L + +T+G K LI R
Sbjct: 617 SSSKRKADVTVNDLEVRTHY------ENETLSKMTVDMLKSFLRSKGKATSGTKPVLIER 670
Query: 617 ILTHM 621
+ +M
Sbjct: 671 VTEYM 675
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 44/303 (14%)
Query: 7 DVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFS---------TTCPAEDQTDETHF 57
DV ++DE+ E Y + K+ V++ +D SP M + + P+E + H
Sbjct: 10 DVIAENDEDELQEDY--LSSLKDVVLFAIDCSPSMMAPQRSNRKGDSMEPSETNS---HL 64
Query: 58 HIAVSCIAQSLKTQIINRLYDEVAICFFNTR----KKKNLQDLNAVF--VFNVAEREQLD 111
+ A+ K + + D V I FN ++ L+ +VF V V+ LD
Sbjct: 65 FATLKAAAELQKKKAMYEPNDLVGIILFNVMDTGDAEEQLKPHVSVFQPVAQVSADTILD 124
Query: 112 RPTARFIKEFDHIEE---SFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
+ +EE S EK +G R L + LR + K A K
Sbjct: 125 -----LLSILSDVEEGTLSLEKRF-RPWG-----RRVPLGDVFNACNWHLRTQAPKAATK 173
Query: 169 RILLFTNEDDPF-GSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFY 227
RI T+ DDP G+ + + R Q D LG+ +E + + F + +
Sbjct: 174 RIFFVTDVDDPHDGNFQ------LDRIAKQNIADLYSLGVIVEPFFIGTEKKPFDPTKHF 227
Query: 228 ADMIGLEGD---DLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTY 284
D++ D D MP+ + +++ R KR I+ + GL I + Y
Sbjct: 228 TDILSRAADDDEDAIQPMPTVVDGFSRILNEMAIRETPKRSQFSINMTLGAGLVIGVKGY 287
Query: 285 ALI 287
+L+
Sbjct: 288 SLV 290
>gi|449542391|gb|EMD33370.1| hypothetical protein CERSUDRAFT_108161 [Ceriporiopsis subvermispora
B]
Length = 677
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 152/633 (24%), Positives = 261/633 (41%), Gaps = 96/633 (15%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAEDQTDETH-------FHIAVSCIAQSLKTQIINRLY 77
E K+ +++ +D SP M E DE + A+ Q K ++I
Sbjct: 25 EGNKDVILFCIDCSPSM------QELYDDERYEDVQTCRLFTALEAAMQIQKKKVIVGPN 78
Query: 78 DEVAICFFNTRKK------KNLQDLNAVFVFNVAEREQLDRPTAR-FIKEFDHIEESFEK 130
D V I FNT ++ + + +V+ +D P + ++ D + + K
Sbjct: 79 DSVGIMLFNTTRRNEATAGQGAEIKKGTYVYQPIA--TIDAPKVQELMRLLDAVRDK-PK 135
Query: 131 EIGSQYGIVSGSR---ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAA 187
+ ++ ++ SR + + WV +R G+SKTA KR+ L T+EDDP G
Sbjct: 136 LLSQEFPPLTESRVPMGDVFTSCNWV----MRDGASKTAVKRVFLITDEDDPH---PGPT 188
Query: 188 KNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIG-------LEGDDLAL 240
+ + ++ +D G+++E +S D+ F S FY+ ++ E L
Sbjct: 189 HDRLAKSAKTTLEDLLQAGVTVEPFFISSEDKSFDPSKFYSFVLSPTNVIEDAESGGAVL 248
Query: 241 FMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDS 300
+ ++ED+ Q+R KR +A G I + Y + G +
Sbjct: 249 PESISIARVEDLLSQMRFHEVPKRAFFSTRLQLAEGFVIGVKGYTPVTERKKGKHEYFYD 308
Query: 301 VTNHPLKTERSFICADTGALMQEPAKRFQPYKGENI-KFSVQELSE-------IKRVSTG 352
+ + + + I D + A + + G + K S+ E E + RV+
Sbjct: 309 LGDRMVVAKSRSIMVDD--MSHAYADKSEILSGMTLGKASMDEEKEDAEQAVGVARVTQA 366
Query: 353 HLR---------------------LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIF 391
++R L GFK +S L N++ STF++P + GS F
Sbjct: 367 NMRPFYTQDEINSFRTMGLEPMIKLLGFKDISELAYEDNVKHSTFIYPDEMTYSGSKRTF 426
Query: 392 IALHRSMLRLNRFAVA--FYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDI 449
AL R+M+R + +A S P A++ Q G +PPG+H+I LP++DDI
Sbjct: 427 TALLRTMVRKKKIGIALGLARRNSTPTFYAMLPQLPKTDESGWDDPPGIHLIPLPFADDI 486
Query: 450 RPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--FSVCQFANPSLQRHYAVLQALAL 507
R + +A+ + K A A + +I ++ + + NPSL H A L+A A
Sbjct: 487 RAAR-----VERAYQANSELEKMARAWIDKITVRQGGYPPDTYPNPSLAYHNAQLEAAAF 541
Query: 508 -EEDDMPEIKDETVPDEEGM-ARPG-VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKA 564
EE D +D + P + + R G +++A +E L DE + A KRKA
Sbjct: 542 REEFDAESFEDLSKPKYDMIHKRAGQLMRAWKEALL------VDETANTVTETAGTKRKA 595
Query: 565 -ATENAAKECANYDWADLADKGKLKEMTVQELK 596
T N A + + D G L ++ V +LK
Sbjct: 596 DVTVNEA------EIRSMNDYGTLAKLRVDQLK 622
>gi|240273084|gb|EER36607.1| Ku70 [Ajellomyces capsulatus H143]
Length = 573
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 205/461 (44%), Gaps = 69/461 (14%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTD----ETHFHIAV 61
DD F +++E+ D Y+ + K+ V++ ++ S M T P + + E+ A+
Sbjct: 11 DDAF-EEEEDIDETGYK---SVKDAVLFAIEISESML--TPPPDTGSKRADKESPATAAL 64
Query: 62 SCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDR 112
C ++ +II+ D + I + T + K + + ++F+ LD
Sbjct: 65 KCAYHLMQQRIISNPKDMIGILLYGTEESKFYDEDESGRGSLSYPHCYLFS-----DLDV 119
Query: 113 PTARFIKEFD---HIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADK 168
P A +K+ H EE E+ I+ S+E S+ N L+ A + + + +
Sbjct: 120 PAAEDVKKLRALVHQEEEAEQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSR 172
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
R+ + T+ DDP K + RAKD DLG+ IEL P+S P++EF S F+
Sbjct: 173 RLFIVTDNDDPHSKDKA-----LRSAATVRAKDLYDLGVMIELFPISQPNKEFDWSKFFD 227
Query: 229 DMI--GLEGDDLALFMPSAGQKLE-----------------DMKDQLRKRMFSKRIVKRI 269
D+I D A P+A K + K R+ +FS +
Sbjct: 228 DIIYKASPTDPEAPAFPTAQTKTSTSGGDGISLLKSLLSSINSKSVPRRALFS-----NV 282
Query: 270 SFIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFICADTGALMQE-PAK 326
I I + Y + + P WL K + + D+ +++ K
Sbjct: 283 PLEIGPDFKISVTGYLIFKRQEPARSCYIWLGGEVPQIAKGITTQMADDSAREVEKWEIK 342
Query: 327 RFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG 386
+ + GE I F+ +E + ++ +R+ GFKPLS L + +++ TF++P+++ VG
Sbjct: 343 KAYKFGGEQISFTQEEQASLRNFGEPTIRIIGFKPLSALPIWASMKHPTFIYPTEEGYVG 402
Query: 387 STCIFIALHRSMLRLNRFAVAFYGNP--SNPRLVALVAQDE 425
ST +F AL++++L+ + A+ ++ P + R++ +A DE
Sbjct: 403 STRVFSALYQTLLKKEKLALVWFVPPLQWHYRILQALALDE 443
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Query: 493 PSLQRHYAVLQALALEEDDMPEIKDETVPDEEGM-ARPG--VV---KAVEEFKLSVYGDN 546
P LQ HY +LQALAL+ED + +D+TVP + R G V+ K +E L +
Sbjct: 427 PPLQWHYRILQALALDEDLPEQPEDKTVPKYRQIDKRAGEFVIAWGKELESQHLMIEAKQ 486
Query: 547 YDEEGDVK--VSEASRKRKAATENAAKECANYDWADLAD-------KGKLKEMTVQELKL 597
VK S A + K + K + D A + D KG L ++T LK
Sbjct: 487 PATSTLVKRPASRAQDQVKGDSRPTKKTKTSPDAAGVGDEVKLHYEKGTLNKLTAAVLKE 546
Query: 598 YLMAHNLSTTGRKETLISRI 617
+L + +LSTTG+K LI R+
Sbjct: 547 FLQSQHLSTTGKKADLIERV 566
>gi|193645803|ref|XP_001952755.1| PREDICTED: x-ray repair cross-complementing protein 5-like
[Acyrthosiphon pisum]
Length = 544
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 228/511 (44%), Gaps = 59/511 (11%)
Query: 27 TKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLY-----DEVA 81
K+++++L+DAS M +T D T F +CIA L +I+ +L D++
Sbjct: 25 VKQHIIFLIDASKPMHNT------YNDTTFF---ATCIA--LCKKIVLKLIRESRNDKIG 73
Query: 82 ICFFNTR--KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIV 139
I + T KK + +N + + +P + IK+ D + + G
Sbjct: 74 ILIYGTNDANKKCPKYINVL--------SEPIKPNIQLIKKLDDVLTGKLIQTGQ----- 120
Query: 140 SGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+ L +A+W + L++K S + I+L T +D P I + K RT R
Sbjct: 121 --CPLSPLSDAVWYSNYLIKKCSENQSCSTIMLITCDDQP--DIGDSKKQFHLRT---RI 173
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAG-QKLEDMKDQLRK 258
D I +L+P+ F ++ FY GL + ++ P G + ++D+ +
Sbjct: 174 DDVIKNNIDFKLIPIG---ATFNMNLFYE---GLLKNFNSISKPINGLESIDDIMLDIND 227
Query: 259 RMFSKRIVKRISFIIANGLSIELNTYAL-IRPTVPGAITWLDSVTNHPLKTERSFICADT 317
++ R V +I F I N I Y + +P + LD TN PL + T
Sbjct: 228 KLKHGRSVSKIKFFINNDFYISTALYKFYTKLKMPSKVK-LDKRTNKPLTSNTQVFTLHT 286
Query: 318 GALMQEPAK-RFQPYKGENIKFSVQELSEIKR-VSTGHLRLHGFKPLSYLKDYHNLRPST 375
LM + + ++ E I F +E++ +K + +RL GF + +++ + S
Sbjct: 287 NELMYKSDQAKYLELANEKIIFKNEEMTILKNGIIKPGIRLLGFISKKNIMIFYHFKTSI 346
Query: 376 FVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY----GNPSNPRLVALVAQDEIVR-AG 430
F+ P+++ V ST +F L L N+ G N LV L+ Q EI+ G
Sbjct: 347 FLRPNNEVVESSTHMFNTLLECCLEKNKCIKCSLKIRKGGKVN--LVILIPQAEIMNETG 404
Query: 431 GQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQF 490
Q P G H+I+LP+S ++ V+ + D ++ ++ + + + + ++
Sbjct: 405 TQNHPSGFHVIFLPFSGCVKKVKPMEPTRD-YESLTNTQISIGMKICESMPI-NYYPALI 462
Query: 491 ANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
NP + H+A+L+++ALE ++P+I DET+P
Sbjct: 463 KNPKINAHWAMLESMALES-ELPDILDETLP 492
>gi|50548281|ref|XP_501610.1| YALI0C08701p [Yarrowia lipolytica]
gi|74604554|sp|Q6CCK2.1|KU70_YARLI RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|49647477|emb|CAG81913.1| YALI0C08701p [Yarrowia lipolytica CLIB122]
Length = 585
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 242/520 (46%), Gaps = 61/520 (11%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
+L PTA IK + E + ++G ++ + E L + + + A +
Sbjct: 94 KLGLPTAAQIKRLKRLAE--DPDLGERFKV---QEEPHLMDVFFDMNRHFINMAPNFASR 148
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPP-DEEFKVSHFY 227
RI+ T++D P + ++D+ +T + R +D L + +E L ++P D+ F S FY
Sbjct: 149 RIIYITDDDTPTTN-----EDDINKTRV-RIEDLSHLKVKVEPLLINPSEDKTFDSSKFY 202
Query: 228 ADMIGLEGDDLALFMPSAGQKLE--DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYA 285
A L ++ + +E D+K + KR R + + I GL + + Y
Sbjct: 203 A---------LVFNEDTSVEPVEAIDLKQFINKRNVLNRSLFNVKMEIGEGLVVGVRGYL 253
Query: 286 LI---RPTVPGAITWLDSVTNHP--LKTERSFICADTG-ALMQEPAKRFQPYKGENIKFS 339
L + T W+ + P K E + ++G ++ + ++ + + + F+
Sbjct: 254 LYAEQKATSTTRKAWVYTGGEKPEIAKLESQAVTIESGRSVDKADLRKTFKFGNDYVPFT 313
Query: 340 VQELSEIKRVSTGHLRLHGFKPLSYLKDY--HNLRPSTFVFPSDKEVVGSTCIFIALHRS 397
++L++I+ +R+ GF S + H++R S F++P+D+++VGS F AL++S
Sbjct: 314 EEQLTQIRYFGEPIIRILGFHNSSDFSELFIHSVRSSMFLYPTDEKLVGSIRAFSALYQS 373
Query: 398 MLRLNRFAVAF--YGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVE 453
+ ++ A+A+ + P L L+ + E G+HM++LP++DDIR P
Sbjct: 374 LKNKDKMALAWVIVRKGAKPILALLIPSTK--------EIEGLHMVFLPFTDDIRQEPKT 425
Query: 454 ELHSDTDAVPRASDDEVKKAAALMKRIDLK-DFSVCQFANPSLQRHYAVLQALALEEDDM 512
EL S A+ + V + R+ + F ++ NP LQ HY V++A+AL+E ++
Sbjct: 426 ELVS-------AAPELVDATKNIFTRLRMPGGFESQRYPNPRLQWHYRVVRAMALQE-EV 477
Query: 513 PEI-KDETVPDEEGM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAA 570
P++ +D+T P + R G A+EE+ + + D+ +E K A +
Sbjct: 478 PKVPEDKTTPKYRSIDTRVG--DAIEEWNKVLQSSSKRPAEDICKAEKKVKSSDAGPPSN 535
Query: 571 KECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRK 610
++ N D+ K +TV EL+ + A+N+ G K
Sbjct: 536 EQMQNMVENDIVGK-----LTVAELRAWGAANNVEPNGSK 570
>gi|164660630|ref|XP_001731438.1| hypothetical protein MGL_1621 [Malassezia globosa CBS 7966]
gi|159105338|gb|EDP44224.1| hypothetical protein MGL_1621 [Malassezia globosa CBS 7966]
Length = 453
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 151/359 (42%), Gaps = 71/359 (19%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
S+K +R+ TN+D+P G K + + + R +D GI +E +S P
Sbjct: 94 ASAKAGTRRVFFITNQDNPH---TGPGKQQIQKACIDRIRDYYRRGIDLEPFFISAPGTP 150
Query: 221 FKVSHFYADMIGLEGDDLAL--FMP-----------------SAGQKLEDMKDQLRKRMF 261
F+++ FYAD++G+ D L P + K ++++Q+ R
Sbjct: 151 FQINTFYADILGVYDDGLLTDTLRPWRLRQWQDQNVSKSAAWDSASKFAELEEQISSREV 210
Query: 262 SKRIV-------KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTE--RSF 312
KR+V +S IAN +L+ P A W V + + +E R
Sbjct: 211 PKRVVFDVLLDLGPLSKTIANSPVDDLHA------KTPQASRWRIHVKGYNVISEATRDL 264
Query: 313 ICADTGALMQEP--------------AKRFQPYKGEN----------------IKFSVQE 342
T ++P A +P + E+ + FS E
Sbjct: 265 PVKVTSYGQEDPFDVYEIVNVGKPCEAVTGEPVRPEDTESVFPLCDSDSARSCVSFSDAE 324
Query: 343 LSEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRL 401
L +I++ L L GFK S L Y N + S F++PSD E GS C F AL SML
Sbjct: 325 LKQIRQFGCIPGLLLLGFKDRSTLHFYENTKHSYFLYPSDLEHPGSKCAFAALLHSMLSK 384
Query: 402 NRFAVAFYGNPSN--PRLVALVAQDEIVRAGG-QVEPPGMHMIYLPYSDDIRPVEELHS 457
N+ A+ + N P L+ Q E + A G Q +PPGMH+I +P+ DDIR LH+
Sbjct: 385 NKVALTLFMPRENAVPAFAVLLPQAEELDASGHQYQPPGMHLIVMPFIDDIREPPSLHA 443
>gi|159171904|gb|ABW96212.1| DNA repair protein [Homo sapiens]
Length = 345
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 157/328 (47%), Gaps = 24/328 (7%)
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKT 308
LED+ ++R + K + R+ + + I + Y+L++ + L TN P+KT
Sbjct: 22 LEDLLQKVRAKETRKWALSRLKLKLNKDIVISVGIYSLVQKALKPPSIKLYRKTNEPVKT 81
Query: 309 ERSFICADTGALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKD 367
+ +TG+L+ KR Q Y I +E E+K L L FKPL LK+
Sbjct: 82 KSRKFNINTGSLLLPSDTKRSQIYGSHQIILEKEETEELKWFDEPALMLMVFKPLVMLKE 141
Query: 368 YHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-D 424
+H RPS F +P + V GS+ +F AL L A+ Y N P LVALV+Q +
Sbjct: 142 HHYPRPSLFTYPEESPVNGSSTLFSALLIKCLEKVVIALCRYTPRRNIPPYLVALVSQEE 201
Query: 425 EIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD 484
E+ QV PG +++LP++DD R V T+ V A+ ++V A+++++
Sbjct: 202 ELDDQKIQVTTPGFQLVFLPFADDKRKV----PFTEKV-MATPEQVDNMKAIIQKLCF-T 255
Query: 485 FSVCQFANPSLQRHYAVLQALAL---EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLS 541
+ F NP LQ+H+ L+ L L EE + D +P E M + + V EFK
Sbjct: 256 YRSDSFENPVLQQHFGNLEPLILYLMEEQAV----DLILPKVEEMNK-RLGSMVNEFKEL 310
Query: 542 VYGDNYDEEGDVKVSEASRKRKAATENA 569
VY +Y+ EG + KRK E +
Sbjct: 311 VYSPDYNPEGKIT------KRKCNNEGS 332
>gi|388583769|gb|EIM24070.1| ATP-dependent DNA helicase ii [Wallemia sebi CBS 633.66]
Length = 653
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 153/674 (22%), Positives = 291/674 (43%), Gaps = 112/674 (16%)
Query: 15 ESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETH-----FHIAVSCIAQSLK 69
+ D E E T++ ++++DA+ M P++D D H I + LK
Sbjct: 11 DDDPELLDEKLFTRDASLFVIDAAAGM-QEYPPSQDPNDRIDEEMPLLHRTFDAILRCLK 69
Query: 70 TQIINRLYDEVAICFFNTRKKKNLQDLNAV--FVFNVAEREQLDRPTARFIKEFDHIEES 127
+ N D V + +NT + K ++ + V V+ + EQL+ R +K+ +
Sbjct: 70 RKAFNSSDDLVGVIIYNTEETKPDKEGSDVKEHVYCLQPIEQLNGNNIRNLKKLVDGSRA 129
Query: 128 FEKEIGSQY--GIVSGSRENSLYNALWVAQGLLRKGS--SKTADKRILLFTNEDDPFGSI 183
+ + ++ + +R + L+++ + + +K A KRI T D+P
Sbjct: 130 DPELLSRKFKPAVFENNRTSMPIGNLYISCNRFFRNNPQTKNASKRIFHITCNDEP---- 185
Query: 184 KGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFK------VSHFYADMIGLEGDD 237
+ A D + A D + I IE ++P +F V FYA ++ + ++
Sbjct: 186 QKNAPEDWLTASRTNASDLLESEIIIEPFFIAPSSSDFDIKTSFDVKKFYAQILPKKENN 245
Query: 238 LALFMPSAGQ---KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELN-----------T 283
+ PS G+ K ++++++LRK KR F + + SI +
Sbjct: 246 EDVTDPSMGEGFAKFDNLEEKLRKLEIPKRTSFTHMFELGDNFSISVKGYRTVVDQKFFP 305
Query: 284 YALIRPTVPGAITWLDSVTN----------HPLKTERSFICADT---GALMQEPAKRFQP 330
Y ++ G + + T P + ++ F+ D GAL+
Sbjct: 306 YVMVAENKKGELEQTEKETRLQDEFTLNEITPSEIKQGFVLGDKSSDGALV--------- 356
Query: 331 YKGENIKFSVQELSEIKRVSTG-HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTC 389
I + Q + I+ L+L GF+ + L HN+ ++F++P++ + GST
Sbjct: 357 -----IPCNTQTYNSIRTFDLPVGLKLLGFQDIDTLSPLHNVGTASFIYPTEDLIEGSTR 411
Query: 390 IFIALH------------RSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRA--GGQVEP 435
F AL R+++R N + P + AL+ Q+E++ + G Q+ P
Sbjct: 412 TFSALLKSCLKLKKLALVRTVMRKN----------AAPIISALLPQEEVIDSDDGSQITP 461
Query: 436 PGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD-FSVCQFANPS 494
G ++I LP++DD+R V ++ + +A+D++ + A +K++ K + ++ NP
Sbjct: 462 NGFYLIPLPFADDLRSVPQIEN-----MKANDEQTEAAGRWLKKLRKKSGYDPKEYENPY 516
Query: 495 LQRHYAVLQALALEED-DMPEIK-DETVPDEEGMA-RPGVVKAVEEFKLSVYGDNYDEEG 551
+ +++ AL+E D ++K D+T+P E M R G + ++E+K ++ D +
Sbjct: 517 FRLLRRNIESQALDEPLDENDVKNDKTLPPIEQMKDRAGGL--IDEWKSTLGWDVVKVDP 574
Query: 552 DVK------VSEASRKRKAATENAAKECANYD-W-ADLADKGKLKEMTVQELKLYLMAHN 603
+V+ V RK A +N + A W A+ DK +L +LK + +H
Sbjct: 575 EVEEAKLADVKPNKRKIDATLDNDVDDSAFIQKWRANQLDKCRL-----DDLKNFCRSHG 629
Query: 604 LSTTGRKETLISRI 617
L GRK LI RI
Sbjct: 630 LKVQGRKSDLIERI 643
>gi|226291174|gb|EEH46602.1| DSB repair complex subunit Ku70 [Paracoccidioides brasiliensis
Pb18]
Length = 547
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 199/464 (42%), Gaps = 84/464 (18%)
Query: 6 DDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQT---DETHFHIAVS 62
DD F +++E+ D Y+ K+ V++ ++ S M T P D E+ A+
Sbjct: 11 DDGF-EEEEDIDETVYK---TVKDAVLFAIEISESML-TPPPDGDSKRADKESPATAALK 65
Query: 63 CIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNA---------VFVFNVAEREQLDRP 113
C ++ +II+ D + I + T K K + + ++F LD P
Sbjct: 66 CAYHMMQQRIISNPKDMIGILLYGTEKSKFYDEEESGRGNLSYPRCYLFT-----DLDVP 120
Query: 114 TARFIKEFD---HIEESFEKEIGSQYGIVSGSREN-SLYNALWVAQGLLRKGSSKTADKR 169
A +K+ H EE ++ I+ S+E S+ N L+ A + + + +R
Sbjct: 121 AAEDVKKLRALVHDEEEADQ-------ILVPSKERVSMSNVLFCANQIFSSKAPNFSSRR 173
Query: 170 ILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYAD 229
+ + T+ DDP +G + RAKD DLG+ IEL P+S P++EF S F+ D
Sbjct: 174 LFIVTDNDDPHSKDRG-----LRSAATVRAKDLYDLGVIIELFPISRPNQEFDRSKFFDD 228
Query: 230 MI-------------------GLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRIS 270
+I G D + + + + K R+ +FS +
Sbjct: 229 IIYKASPTDPEAPAFSTQTKSSTSGGD-GISLLKSLLSSINSKSVPRRALFSN-----VP 282
Query: 271 FIIANGLSIELNTYALIRPTVPG--AITWLDSVTNHPLKTERSFIC-------ADTGALM 321
I I + Y + + P WL E IC AD A
Sbjct: 283 LEIGPDFKISVTGYLIFKRQEPARSCYVWLGG--------EEPQICNGITTQMADDSARE 334
Query: 322 QEPAKRFQPYK--GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
E + + YK GE I F++ E + ++ +R+ GFKP+S L + +++ TF++P
Sbjct: 335 VEKWEIRKAYKFGGEQISFTLDEQASLRNFGDPTIRIIGFKPISSLPIWASMKHPTFIYP 394
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALV 421
S++ VGST +F AL++++L+ + A+ ++ N P + A++
Sbjct: 395 SEEGYVGSTRVFSALYQTLLKKRKLALVWFVPRKNAAPVMAAMI 438
>gi|452822797|gb|EME29813.1| ATP-dependent DNA helicase 2 subunit 1 isoform 2 [Galdieria
sulphuraria]
Length = 463
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 59 IAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFI 118
+A++CI + K++II+ D + + F T K N DL +++V +LD P I
Sbjct: 14 LALNCIKEIFKSRIISDTGDLLGVVLFGTSKVNNPNDLASIYVL-----LELDVPDPESI 68
Query: 119 KEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKG-SSKTAD--KRILLFTN 175
+ +E++ + + SQ G + + L+ + LL SKT + KR+LLFT+
Sbjct: 69 LYLETLEKT-PQWMMSQLGSLERYAKVKFQELLFTCRSLLNHAVRSKTLNVRKRLLLFTD 127
Query: 176 EDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPL-SPPDEEFKVSHFYADMIGLE 234
+DDP + ++ +++A+D + G++IELLPL S + F FY D+IG
Sbjct: 128 DDDPIEN-----DENVKNLNIRQARDLSESGMNIELLPLKSSRSKPFDYHLFYEDVIGSS 182
Query: 235 GDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGL----------SIELNTY 284
+L + + E+++ + K+ + KR++ +F+ NGL ++ L Y
Sbjct: 183 RQELEP-VSDPISRFEELQLHILKKKYKKRVLNN-TFLYLNGLQNEGAHAELETVGLEVY 240
Query: 285 ALI-RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK-RFQ-PYKGENIKFSVQ 341
AL RP+ + +L++ N P++ ++GAL+ R+ P+ G F+
Sbjct: 241 ALFHRPSRSKKV-FLEARNNEPVRRVTIAYSEESGALLANANDIRYSFPFAGVACVFTHS 299
Query: 342 ELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPS 380
E+ E+ + + L GF+ + LK +N+RPS F++PS
Sbjct: 300 EMEELGHLCRYGMELIGFENKNKLKWQYNMRPSYFLYPS 338
>gi|355782965|gb|EHH64886.1| hypothetical protein EGM_18216, partial [Macaca fascicularis]
Length = 371
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 171/375 (45%), Gaps = 58/375 (15%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRL-YDEVAICFFNTRK 89
+++LVD S MF + D T F +++ CI ++II D +A F+ T K
Sbjct: 37 LIFLVDDSRPMFES-----QSEDLTPFDMSIQCIQSVYISKIIRSSDRDLLAGVFYGTEK 91
Query: 90 KKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYN 149
KN + +++ ++LD P+A+ I E D + +++ Q + GS + SL
Sbjct: 92 DKNSVNFKNIYIL-----QELDNPSAKQILELDQFKGQ-QRQKRFQDLMGHGS-DYSLGE 144
Query: 150 ALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR--AKDAQDLGI 207
LWV K + RI+LFT+ED+P G ND ++ + R A+D +D GI
Sbjct: 145 VLWVCASHFSDFQFKMSHTRIMLFTSEDNPHG-------NDSSKASWARTEAEDLRDTGI 197
Query: 208 SIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
++L L P F +S FY D I + E +DL + + KLED+ ++R + K +
Sbjct: 198 FLDLTHLKKPGG-FDISWFYRDTINIAEDEDLRVHFEESS-KLEDLLRKVRAKEVQKAL- 254
Query: 267 KRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS-------FICADTGA 319
+P+ P + W N P+K ++ F
Sbjct: 255 ---------------------KPS-PIKLYW---EKNEPVKIKKKKQTKTWTFNTNTCSL 289
Query: 320 LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFP 379
L+ K+ Q Y + I +E E+K L L GFKPL LK +H LRPS F++P
Sbjct: 290 LLLSDTKKSQIYGSQQIILEKEETEELKWFDEPGLMLMGFKPLVMLKKHHYLRPSLFMYP 349
Query: 380 SDKEVVGSTCIFIAL 394
+ ++GS+ +F L
Sbjct: 350 EESLLIGSSTLFSTL 364
>gi|412994086|emb|CCO14597.1| predicted protein [Bathycoccus prasinos]
Length = 832
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 164/376 (43%), Gaps = 49/376 (13%)
Query: 286 LIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQEL-- 343
L++ T A ++D+ + L+TE ++ ++G ++ P K + E K V+
Sbjct: 436 LVQKTTKPAPKYVDAEDHQDLRTETVYLDKESGEVVA-PKKSYLEIGPEKQKVIVKNAEK 494
Query: 344 ------SEIKRVSTGHLRLH--GFKPLSYLKDYHNLRPSTFVF-PSDKEVVGSTCIFIAL 394
S+ + L +H GF S + L F +D+ V G F AL
Sbjct: 495 QATYAASKNFHANACKLGMHCLGFVDTSEVTQRDRLLKGQGKFVRADETVFGGKEAFSAL 554
Query: 395 -------HRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSD 447
H SML Y S + VAL+ Q E G P G H++ +P+ D
Sbjct: 555 LTACAERHVSML-----CADVYNAKSQVKYVALIPQVENDAYLGV--PAGFHVVKVPFRD 607
Query: 448 DIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALAL 507
D+R E+ + A++ +++ A AL++ ++L+++ + +NP LQ HY L+A+AL
Sbjct: 608 DLRQPEKAIGKSAPQTSATETQIQAAEALVESLELQEYHPTRISNPELQAHYKALEAIAL 667
Query: 508 EEDDMPEIKDETVPDEEGMARP-GVVKAVEEFKLSVYG-DNYDEEGDVKVSEASR----- 560
+ + +I D+T P E + + GV+ + F + YG + D G
Sbjct: 668 NKRKVEKISDDTAPPIEQLWKEHGVIAHIRNFSQTTYGIEQQDRVGGNDEDADEDDDGNG 727
Query: 561 ----KRKA------ATENAAKECAN------YDWADLADKGKLKEMTVQELKLYLMAHNL 604
KRKA E A K + A KG L E+TV LK YL AHNL
Sbjct: 728 IIGLKRKARGGSSKGGEKALKTVVQEIRPGFETFVKKAKKGSLSELTVDVLKTYLDAHNL 787
Query: 605 STTGRKETLISRILTH 620
+G K ++ISRI H
Sbjct: 788 PKSGNKASIISRIEKH 803
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 27 TKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFN 86
+K Y Y DA + +T + Q + +A++ L+ +++ DE+ + F+N
Sbjct: 62 SKNYFYYGDDADDE--NTKESEQTQKSSNYVQVALNAYRNVLRDRVVCTPDDEIGLVFYN 119
Query: 87 TRKKKNLQDLNAVFVFN-----VAEREQLDRPTARFIKEFDHIEESFEKEIG-SQYG--- 137
T+ + + + +FVF+ AER A FI + E FE +IG S YG
Sbjct: 120 TKNRSGELEFDNIFVFHELAPITAERVG---AIANFIDNGEFGEMLFEDQIGSSNYGEEE 176
Query: 138 IVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRT--- 194
EN++ +ALW A +L + ++KT + +FTN+D F S K A T
Sbjct: 177 DKEKEEENAMNHALWTASHMLSR-NAKTR-RSAYVFTNDDAVFRSKKEAEGTSSMGTPKK 234
Query: 195 ---------------TMQRAKDAQDLGISIELLP 213
T+ R ++ + G+ +EL P
Sbjct: 235 EKKKSKSSRKTAKEATIARCEEMANAGVKLELFP 268
>gi|374351674|gb|AEZ36038.1| KU70, partial [Nicotiana benthamiana]
Length = 113
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLK 307
+ ED+KDQLRKRMF KR V+R+ F+I NGLSIELNTYALIRPT PG ITWLDS+TN PLK
Sbjct: 17 RFEDLKDQLRKRMFKKRRVRRLRFVIFNGLSIELNTYALIRPTNPGTITWLDSMTNLPLK 76
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
KLK++TV ELK YL AHN+ TG+KE LISRILTHMGK
Sbjct: 76 KLKDLTVVELKYYLAAHNIPVTGKKEALISRILTHMGK 113
>gi|383855864|ref|XP_003703430.1| PREDICTED: ATP-dependent DNA helicase 2 subunit 1-like [Megachile
rotundata]
Length = 601
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 140/641 (21%), Positives = 276/641 (43%), Gaps = 93/641 (14%)
Query: 14 EESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIA--VSCIAQ---SL 68
EE+D + ++E ++ V++++DA+P MF ++ H I + CI Q L
Sbjct: 12 EENDEDIFKELYGVRDGVLFIIDATPPMFE---------NDPHEGIPYFLQCIRQYKEVL 62
Query: 69 KTQIINRLYDEVAICFFNTRKK---KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIE 125
K ++ D + + F T + + + + FN+ + L++ I E D
Sbjct: 63 KQKLSWSRQDWMGLLLFGTEESDTDSETKHVKTLQKFNLVSVDDLNK-----IIEID--- 114
Query: 126 ESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKG 185
E Y ++ + L++ LW A + + ++++LFT +DDP
Sbjct: 115 ---EGGKWKHYKNIASTTAYPLHDVLWDAARIFTTVTITMPIRKVILFTCQDDP----PM 167
Query: 186 AAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSA 245
N+ R + + + D+ + + ++ L E++ FY D+ L P
Sbjct: 168 TNSNEKHRIRL-KVQSYNDIELQLFVVGLG---EKWNHDIFYKDLEMLSEK----IDPDD 219
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHP 305
+++ +KD +++ R + ++ + I ++++++ L T + T+ P
Sbjct: 220 YERMS-LKDIVQQIKLPSRNMAKLPWRIGENVNVDISLCNLCVKTEYLKKKNISKATSTP 278
Query: 306 LKTERSFICAD----------------TGALMQEPAKRFQPYKGENIKFSVQELSEIKRV 349
L + A+ +++ +++Q + GENI F + E+ + V
Sbjct: 279 LTSYTYLQIANENNDKEEAKDDEDEQKISPVLEMDIQKYQTFGGENIYFKLAEVRSLCAV 338
Query: 350 STGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL-----HRSMLRLNRF 404
+ L KP+SY YH P FV P+ +F AL R ++ +
Sbjct: 339 REPGIDLICIKPISYHPLYHFGTP-VFVVPAKTNNKDQKLLFGALLSKCDSRDLMIICAV 397
Query: 405 AVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPV-----EELHSDT 459
+ + S+ L ++ R G G ++ +P+ +++R + E ++ D+
Sbjct: 398 TIRRH---SSTILYTMIPH---ARNG------GFYLYKIPFKENVRKLNDHLMEYIYDDS 445
Query: 460 DAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQ--ALALEEDDMPEIKD 517
VP + + ++ ++ + D++ F NP LQ ++ AL LE+ D P D
Sbjct: 446 KNVPPTDANGIGLLEKMINKLSV-DYNPNMFFNPKLQVQLQTIETLALGLEQRDPP--PD 502
Query: 518 ETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKR-KAATENAAKECANY 576
TVP+ E M R V +EE Y + + E+ + V E+ +KR K ATEN + +
Sbjct: 503 TTVPNTEEM-RKKVKDLLEE-----YDEIFSEDTNSTVVESPKKRVKKATENTDLDNPD- 555
Query: 577 DWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRI 617
+ L G+++++T+ +LK L L TTG+K+ LI RI
Sbjct: 556 EIKKLVKDGQIQKLTMPQLKGVLQNLCLKTTGKKDELIKRI 596
>gi|430812731|emb|CCJ29852.1| unnamed protein product [Pneumocystis jirovecii]
Length = 237
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 11/197 (5%)
Query: 331 YKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCI 390
+ GE I FS +++ + +R+ GFKPL L + N+ PS F++P D + S+ I
Sbjct: 5 FGGEKILFSKKQIDSLHFYGDPVIRILGFKPLDQLHFWENILPSYFLYPIDNKNHSSSKI 64
Query: 391 FIALHRSMLRLNRFAVAF---YGNPSNPRLVALVAQDEI--VRAGGQVEPPGMHMIYLPY 445
FI+L + + ++ AVA+ Y N SNPR+ LV+ +I + G P G+ I LP+
Sbjct: 65 FISLAHVLYKHDKIAVAWFHPYKN-SNPRICVLVSNFDINEKQKRGYELPQGIFAIILPF 123
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
SDDIR L+ +V +A D + K +++ + + ++ ++ +P +Q Y LQ++
Sbjct: 124 SDDIR----LNPQQTSV-KAPDVLIDKMCDIIEHLIVNTYNPLEYKSPGIQWIYKKLQSI 178
Query: 506 ALEEDDMPEIKDETVPD 522
LEED I+D T+P+
Sbjct: 179 ILEEDSCISIEDNTIPN 195
>gi|119623206|gb|EAX02801.1| hCG18775, isoform CRA_b [Homo sapiens]
Length = 441
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 10/263 (3%)
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKT 308
LED+ ++R + K + R+ + + I + Y+L++ + L TN P+KT
Sbjct: 106 LEDLLQKVRAKETRKWALSRLKLKLNKDIVISVGIYSLVQKALKPPSIKLYRKTNEPVKT 165
Query: 309 ERSFICADTGALM-QEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKD 367
+ +TG+L+ KR Q Y I +E E+K L L FKPL LK+
Sbjct: 166 KSRKFNINTGSLLLPSDTKRSQIYGSHQIILEKEETEELKWFDEPALMLMVFKPLVMLKE 225
Query: 368 YHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQ-D 424
+H RPS F +P + V GS+ +F AL L A+ Y N P LVALV+Q +
Sbjct: 226 HHYPRPSLFTYPEESPVNGSSTLFSALLIKCLEKVVIALCRYTPRRNIPPYLVALVSQEE 285
Query: 425 EIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD 484
E+ QV PG +++LP++DD R V T+ V A+ ++V A+++++
Sbjct: 286 ELDDQKIQVTTPGFQLVFLPFADDKRKV----PFTEKV-MATPEQVDNMKAIIQKLCF-T 339
Query: 485 FSVCQFANPSLQRHYAVLQALAL 507
+ F NP LQ+H+ L+ L L
Sbjct: 340 YRSDSFENPVLQQHFGNLEPLIL 362
>gi|355562639|gb|EHH19233.1| hypothetical protein EGK_19907, partial [Macaca mulatta]
Length = 371
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 168/380 (44%), Gaps = 68/380 (17%)
Query: 31 VVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRL-YDEVAICFFNTRK 89
+++ VD S MF + D T F +++ CI ++II+ D +A F+ T K
Sbjct: 37 LIFSVDDSRAMFESQSE-----DLTPFDMSIQCIQSVYISKIISSSDRDLLAGVFYGTEK 91
Query: 90 KKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI-----EESFEKEIGSQYGIVSGSRE 144
KN + +++ ++LD P+A+ I E D ++ F+ +G GS +
Sbjct: 92 DKNSVNFKNIYIL-----QELDNPSAKQILELDQFKGQQRQKRFQDLMGH------GS-D 139
Query: 145 NSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK--DA 202
SL LWV K + RI+LFT+ED+P G ND ++ + R + D
Sbjct: 140 YSLGEVLWVCASHFSDFQFKMSHTRIMLFTSEDNPHG-------NDSSKASWARTEGGDL 192
Query: 203 QDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFMPSAGQKLEDMKDQLRKRMF 261
+D GI ++L+ L P F +S FY D I + E +DL + + LED+ ++R +
Sbjct: 193 RDTGIFLDLMHLKKPGG-FDISWFYRDTINIAEDEDLRVHFEESSN-LEDLLRKVRAKEL 250
Query: 262 SKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS-------FIC 314
K AL + L TN P+KT+ F
Sbjct: 251 QK---------------------ALKSSAIK-----LYQETNEPVKTKTLKQTKTWTFNT 284
Query: 315 ADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPS 374
L+ K+ Q Y + I +E E+K L L GFKPL LK +H LRPS
Sbjct: 285 NTCSLLLLSDTKKSQIYGSQQIILEKEETEELKWFDDPGLMLMGFKPLVMLKKHHYLRPS 344
Query: 375 TFVFPSDKEVVGSTCIFIAL 394
F++P + ++GS+ +F L
Sbjct: 345 LFMYPEESLLIGSSTLFSTL 364
>gi|406696190|gb|EKC99485.1| hypothetical protein A1Q2_06217 [Trichosporon asahii var. asahii
CBS 8904]
Length = 682
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 132/584 (22%), Positives = 241/584 (41%), Gaps = 104/584 (17%)
Query: 25 EATKEYVVYLVDASPKMFSTTCPAEDQTDE-------THFHIAVSCIAQSLKTQIINRLY 77
+ ++++++++DAS M P D+ +E + H A+ + + ++
Sbjct: 27 DVAEDHILFVIDASESMHK---PLPDEENEAGIIRGKSPLHQALESVCNIERNKVTTGPS 83
Query: 78 DEVAICFFNTR----------------KKKNLQDLNAVFVFNVAEREQLDRPTARFIKEF 121
D V + F+N K + L+ ++A + + Q + A++ ++
Sbjct: 84 DSVGLVFYNVDDPTSGASQGKAGSGILKFQQLRQISAEDIKRIYRIVQ--QANAQYDEQT 141
Query: 122 DHIEESFEKEIGSQ-YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPF 180
+ EE+ E I + + + E ++ N + R G +KRI L T++D+P
Sbjct: 142 ESDEETVEPAILRELFPPRPANDEVNIANVFTDCNHVFRDGKL-VGNKRIFLITDDDEPQ 200
Query: 181 GSIKGAAKNDMTRTT---------MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI 231
GS+ RTT +Q + G + L P + +
Sbjct: 201 GSL---GNRQPARTTYNVRLPLPSLQLTSGSPHFGCECQHLLCWPTGKALRSPDL----- 252
Query: 232 GLEGDDLALFMPSAGQKLEDMKD---QLRKRMFSKRIVKRISFIIANG-----LSIELNT 283
LE + A +P+A L ++ D +L R KR K+ S + G + I ++
Sbjct: 253 -LEHEQFAREIPAASDGLSELADIISELVIRQAPKR--KQFSIPLKFGGRDGDIEIGVSG 309
Query: 284 YALIRPTVPGAITWLDSVTNHPLKTERSFICADTG-----------------ALMQEPAK 326
+ +P + + T ++T+ + A+TG A + +
Sbjct: 310 WNKGQPK----LVHMQGETVEEVQTKTEYTAAETGGELGAHEITLAYQFGKEATIPNVLE 365
Query: 327 RFQPYKGENIKFSV----------QELSEIKRVST------GHLRLHGFKPLSYLKDYHN 370
+ KGE+ ++ Q+ + R T +R+ GF+ + N
Sbjct: 366 KNYWEKGEDGPAALSQMDVDGSADQQPKVVARTRTMSIADLAEIRILGFQSPERCRLEDN 425
Query: 371 LRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDE-IV 427
+ + F++P + GST F AL S L+LNR A+A +N P V L+ Q E
Sbjct: 426 VAHAYFIYPDETNYTGSTRTFTALLNSCLKLNRHALAIARLRANSPPEFVLLIPQAETFA 485
Query: 428 RAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD--F 485
+ GGQ +PPG H+I LP+ DDIR +D A+D+EV +++R+ K +
Sbjct: 486 KGGGQEDPPGFHVIRLPFVDDIRDPPRGMTDNIV---ATDEEVMAMEKIIRRLRFKSGKY 542
Query: 486 SVCQFANPSLQRHYAVLQALALEED-DMPEIKDETVPDEEGMAR 528
+ + NP+LQ H L+ALA EED D +D +P G+ +
Sbjct: 543 ASDAYQNPALQYHQRQLEALAFEEDFDTAMFEDVALPKYAGVHK 586
>gi|290970691|ref|XP_002668219.1| predicted protein [Naegleria gruberi]
gi|284081492|gb|EFC35475.1| predicted protein [Naegleria gruberi]
Length = 225
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 99/214 (46%), Gaps = 58/214 (27%)
Query: 292 PGAITWLDSVTNHPLKTERSFICADTGA-LMQEPAKRFQ--------------------- 329
P A+ L S TN LK E FIC DTG LM+ Q
Sbjct: 5 PAAV-HLHSDTNKLLKCETKFICQDTGTELMRNGNNILQNELSSSTTTTTTTNNNNNTTS 63
Query: 330 ---------------------PYKGENIKFSVQELSEIKR------VSTGH----LRLHG 358
Y G +F+++EL+ IK+ V H ++L G
Sbjct: 64 SSTNEFTNSSSSSSNDMIYYYEYGGHKSEFTLEELTNIKQLKNVSGVKNEHVQPGIKLIG 123
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPR 416
FKP S LK YHN + S F++P+D ++ GS ALH+ M+ +NR A+ + + P+
Sbjct: 124 FKPKSRLKIYHNYKSSGFLYPNDSKINGSLLTLSALHKKMIEMNRIAICRFIQREGTMPQ 183
Query: 417 LVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDD 448
+AL+ Q+E++ + Q+ PPG +IYLPY+D+
Sbjct: 184 FIALLPQEELIDEESNTQITPPGFQIIYLPYADE 217
>gi|403413233|emb|CCL99933.1| predicted protein [Fibroporia radiculosa]
Length = 734
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 208/502 (41%), Gaps = 88/502 (17%)
Query: 25 EATKEYVVYLVDASPKMFST-TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAIC 83
+ ++ +++ +D SP M P + H + A+ + K +++ D V I
Sbjct: 67 DGRRDVILFCIDCSPSMLELHDDPKYENLQTCHLYTALEAAMEIEKKKVLIGPNDAVGIM 126
Query: 84 FFNT---------------RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESF 128
FNT K+ + N ++L R ++ +H+ E+F
Sbjct: 127 LFNTVGLVAFLNEPGGQSAEIKRGTYVHQPINTINAPSVQELIRLLEAAREDPNHLREAF 186
Query: 129 EKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAK 188
++ + + + WV +R G+ KTA KRI L T+EDDP G A+
Sbjct: 187 PPLTETRVPM-----GDVFTSCNWV----IRDGAPKTATKRIFLITDEDDPH---PGPAR 234
Query: 189 NDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-----EGDDLALFMP 243
+ + D G+ +E +S ++EF+ + FY+ ++ +GD A +P
Sbjct: 235 ERLITSARTTHIDLGQAGVIVEPFFISTEEKEFRPAKFYSSVLLPHNLVDDGDAAATVLP 294
Query: 244 SAGQ--KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITW---- 297
+ +++D+ Q+R KR + + +A GL+I + Y L+ GA +
Sbjct: 295 ESISITRIDDLLQQMRFHEVPKRALFSLPLQLAPGLTIGVKGYGLVTEQRRGAYKYFVDL 354
Query: 298 ---LDSVTNHPL--------KTERSFIC--ADTGA-LMQEPAKRFQPYKG---------- 333
++ T+ + +TER+ + GA + E A+ +G
Sbjct: 355 GDRMEVATSRTVYVDEDRQAETERTRVLYGLQLGATVAAEEAEVASDDEGGTSARVVSLN 414
Query: 334 ENIKFSVQELSEIKRVSTG-HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
+ ++ E+ + + ++L GFK S L N++ S F++P + GS F
Sbjct: 415 SRVFYTADEVRSFRNMGLDPGIKLLGFKDRSELAFEDNVKHSLFIYPDEMSYSGSKRTFS 474
Query: 393 ALHRSMLRLNRFA--VAFYGNPSNPRLVAL-----------VAQDEI-----------VR 428
AL R+M+R + A ++ S+P A+ +A+DE+ V
Sbjct: 475 ALLRTMIRKKKIALVLSLARRNSSPVFCAMLPQQCHAAELWIARDEMRTISYRKHPQKVD 534
Query: 429 AGGQVEPPGMHMIYLPYSDDIR 450
G EPPG H+I LP++DDIR
Sbjct: 535 ESGWREPPGFHLIPLPFADDIR 556
>gi|401883935|gb|EJT48116.1| hypothetical protein A1Q1_02926 [Trichosporon asahii var. asahii
CBS 2479]
Length = 683
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 26/236 (11%)
Query: 300 SVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF 359
S P R+ + ++G+ + + +FQP N L+EI R+ GF
Sbjct: 367 SADQQPKVVARTRVSNNSGSSLTTGSIQFQPMPFAN-------LAEI--------RILGF 411
Query: 360 KPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRL 417
+ + N+ + F++P + GST F AL S L+LNR A+A +N P
Sbjct: 412 QSPERCRLEDNVAHAYFIYPDETNYTGSTRTFTALLNSCLKLNRHALAIARLRANSPPEF 471
Query: 418 VALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIR-PVEELHSDTDAVPRASDDEVKKAAA 475
V L+ Q E + GGQ +PPG H+I LP+ DDIR P + + A+D+EV
Sbjct: 472 VLLIPQAETFAKGGGQEDPPGFHVIRLPFVDDIRDPPRGMTENI----VATDEEVMAMEK 527
Query: 476 LMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEED-DMPEIKDETVPDEEGMAR 528
+++R+ K ++ + NP+LQ H L+ALA EED D +D +P G+ +
Sbjct: 528 IIRRLRFKSGKYASDAYQNPALQYHQRQLEALAFEEDFDTAMFEDVALPKYAGVHK 583
>gi|195108245|ref|XP_001998703.1| GI24114 [Drosophila mojavensis]
gi|193915297|gb|EDW14164.1| GI24114 [Drosophila mojavensis]
Length = 631
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 137/632 (21%), Positives = 263/632 (41%), Gaps = 77/632 (12%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
+E ++++VDA+ ++ T F A+ I + + ++ D + + F NT
Sbjct: 28 REAILFVVDANLEVNGNTT--------ERFMDALRLIRGAFISGMLVNGKDLMGLVFANT 79
Query: 88 RKKKNLQDL----NAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSR 143
+ Q++ N N A L + T ++ F ++ E+ +YG+
Sbjct: 80 KHSPPPQEVQCLENITVSANCAIFLPLRQLTKAIVEHFMDFMQNAEELFPKEYGLAEPDG 139
Query: 144 ENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQ 203
S + + +L K K + +I+ T+ ++P + +T +Q+A D +
Sbjct: 140 RGSFAQMIRLCIEMLEKCGKKLNNAKIVYITDVEEPH-----PPSSPEFQTALQKASDLE 194
Query: 204 DLGISIELLPLSPPDEEFKVSHFYADMIGL----EGDDLALFMPSAGQKLEDMKDQLRKR 259
+++P+ ++F FY + I L E D A +P A + E ++D+ ++
Sbjct: 195 GKEFEFQVIPMI---DDFDYEPFYKEFITLSRAIEID--AFRVPDAQLQREILEDRKLRQ 249
Query: 260 MFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTERSFICADTG 318
F +R + + + L I + Y R P + + N ++ R +
Sbjct: 250 DFLRRCLGHFTLSLGPNLDISVQYYNYFQRRAYPQKVHIMRR-DNSVVRKRRQIMVRQQD 308
Query: 319 ALMQEPAKRFQ----------PYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDY 368
QE +Q E ++ + ++L+ ++ + + L GFK S L
Sbjct: 309 GQTQEITHEYQIKMTGGWYECKIGEEKLRVTTEQLNRVRNLHPPGMMLLGFKHRSTLPTN 368
Query: 369 HNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALV----A 422
+P +F++P D++++GS +F AL + L + AV + S PR VALV A
Sbjct: 369 SYSKPCSFMYPDDQKIIGSKRLFRALWQRCLERAKIAVCLFMCKRKSVPRYVALVPVEAA 428
Query: 423 QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDL 482
Q + + G ++YLP + IR ++ ++ A A+D+ V +++++ +
Sbjct: 429 QPDDKNYRSLLSGDGFKIVYLPEAKHIRHIDMCDWNSTA-NTATDEGVDFFQKVIRKLSV 487
Query: 483 KDFSVCQFANPSLQRHYAVLQALAL----EEDDMPEIKD---------ETVPDEEGMARP 529
D+ +P+L+ + L ALAL E+D + ++ D + +P E + P
Sbjct: 488 -DYQPNLINDPNLEVLQSNLLALALDFKTEDDGLSQLPDPAMQNKRIEKLLPTYETLFMP 546
Query: 530 GVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKGK-LK 588
VE K N DE KV++ + ++ +YD+ +L K K L
Sbjct: 547 ----EVEPAKKRAAKSNADEASAPKVAKIEQ----------EQLCSYDFVELLIKDKRLN 592
Query: 589 EMTVQELKLYLMAH---NLSTTGRKETLISRI 617
T Q+L+ L H L T K LI RI
Sbjct: 593 ACTAQQLRYILDEHFGVKLPKTATKAVLIERI 624
>gi|296226822|ref|XP_002759138.1| PREDICTED: X-ray repair cross-complementing protein 6-like, partial
[Callithrix jacchus]
Length = 226
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 27/216 (12%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+ ++ +++LVDAS MF + +ED+ T F +++ CI ++II+ D +A+ F+
Sbjct: 33 SGRDSLIFLVDASRAMFES--QSEDEL--TPFDMSIQCIQSVYISKIISSDRDLLAVVFY 88
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHI-----EESFEKEIGSQYGIVS 140
T K KN + ++V ++LD P A+ I E D ++ F++ +G
Sbjct: 89 GTVKDKNSVNFKNIYVL-----QELDNPGAKRILELDQFKGQQGQKCFQELMGH------ 137
Query: 141 GSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK 200
GS + SL LWV L K + KRI+LFTNED+P G+ +AK RT +A
Sbjct: 138 GS-DYSLSEVLWVCANLFSDVQFKISHKRIMLFTNEDNPHGN--DSAKASRART---KAG 191
Query: 201 DAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD 236
D +D GI ++L+ L P F +S FY D+I + D
Sbjct: 192 DLRDTGIFLDLMHLKKPG-GFDISLFYRDIISIAED 226
>gi|299750389|ref|XP_001836717.2| Ku70 [Coprinopsis cinerea okayama7#130]
gi|298408880|gb|EAU85129.2| Ku70 [Coprinopsis cinerea okayama7#130]
Length = 559
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 144/633 (22%), Positives = 249/633 (39%), Gaps = 126/633 (19%)
Query: 21 YQEHEATKEYVVYLVDASPKMFST-TCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDE 79
Y + ++ +++ +D S M P + + + A+ Q K +I++ D
Sbjct: 21 YSLFDGKRDVILFCIDCSESMQELYDHPDYEDVKTSKLNRALDAAMQIEKRKILSGPNDS 80
Query: 80 VAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIV 139
V I FNT +K + + + L +P + ++
Sbjct: 81 VGIMLFNTTRKAE----GGGYASEIKKGTHLYQPIS----------------------LL 114
Query: 140 SGSRENSLYNALWVAQG---LLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTM 196
S + + L AQ LR+ DK + P G + +A N + R +
Sbjct: 115 SAPKVQEIIRLLDAAQEDPEELRREFPPVKDKNV--------PIGDVFTSA-NWILRDGL 165
Query: 197 QRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI---GLEGD-----DLALFMPSAG-Q 247
D G+++E +S ++ F VS FY+ ++ LE D D +L S
Sbjct: 166 ----DLVQAGVTVEPFFISTEEKPFDVSKFYSSVLLPTNLEDDEELQQDGSLLPESISIA 221
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNH--P 305
++ED+ +Q+R KR + + F + G +I + YALI GA + + +
Sbjct: 222 RIEDLLEQMRIHESPKRTLFSVPFHLGEGFTIGVKGYALITEQSKGAYKYFADLGDRMEV 281
Query: 306 LKTERSFICADTGALMQEPAKRFQPYK----------GENIKFSVQELSEIKRVSTGHLR 355
K + ++ D A + + F GE+ F V ++V G +
Sbjct: 282 AKVKTVYVDEDRDAEVDKSRFVFGAGAGTAAANNDGDGEDDSFGV------RKVKIGQRK 335
Query: 356 LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN- 414
D+ L S + GS F AL SM+ ++ +A N
Sbjct: 336 F----------DHSALWASNLTY------SGSKRTFKALLNSMIEKDKIGLALVLMRKNA 379
Query: 415 -PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P L+ Q E QV+PPG+H+I LP++DDIR + D RAS V+KA
Sbjct: 380 SPVFCYLLPQKETRDGAYQVDPPGIHIIPLPFADDIR-----AAPFDEALRASAPLVEKA 434
Query: 474 AALMKRIDLKD--FSVCQFANPSLQRHYAVLQALALEEDDMPE-IKDETVPDEEGMARPG 530
A + ++ +K + + NP+L H A L+A A E+ P+ +D T+P EG+ +
Sbjct: 435 KAFVDKLKIKQGTYPPDAYPNPALAYHNAQLEASAFREEYDPDSFEDLTLPPVEGIHK-- 492
Query: 531 VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKG-KLKE 589
A + K E A +E ++D +A G K K
Sbjct: 493 --------------------------RAGKLLKGWKE-ALEEDPSFDVVPVATTGSKRKA 525
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
+ V +LK +L + + +G+K+ LI R+ +G
Sbjct: 526 LKVDQLKEFLRSKGAAVSGKKDELIQRVSDILG 558
>gi|413935874|gb|AFW70425.1| putative protein phosphatase 2C family protein [Zea mays]
Length = 907
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
Query: 20 FYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDE 79
E EA KE VVYLVDASPKMF+ PA Q ETHFH V+CI +SLKTQII R YDE
Sbjct: 143 LMNEREANKEMVVYLVDASPKMFT---PAATQ--ETHFHTIVNCITESLKTQIIGRSYDE 197
Query: 80 VAICFFNT 87
VAICFFNT
Sbjct: 198 VAICFFNT 205
>gi|428176210|gb|EKX45096.1| hypothetical protein GUITHDRAFT_109142 [Guillardia theta CCMP2712]
Length = 620
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 160/653 (24%), Positives = 272/653 (41%), Gaps = 102/653 (15%)
Query: 31 VVYLVDASPKM-----FSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
+++L+D S KM F T ++ +D T+F+ ++ I + +I D I F
Sbjct: 3 IIFLLDCSEKMHKEMKFRDTKTGKEVSD-TYFNRSLRAIFDLYRDRIRFTDRDMFGIILF 61
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSREN 145
NT +N L V V + +LD+ IKE + E + + SG+ N
Sbjct: 62 NTNSNEN--SLQGVKVLS-----KLDKLNVERIKELKELLEQPQTDRKKCSSSTSGT--N 112
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
L LW +GS K A K I L T + +PF G++K M +Q+AKD D
Sbjct: 113 HLRFGLWCCMEEF-QGSKKDASKEIYLLTCDSNPF---PGSSK--MENDCIQKAKDCLDN 166
Query: 206 GISIELLPL---------SPPDEEFKVSHFY-------ADMIGLEGDD-LALFMPSAGQK 248
I++ PL S + FK +FY A ++ E DD L LF S+ +
Sbjct: 167 MTKIDVFPLRDALNGEGGSDNESGFKGVNFYRKLSVTIAVVLRSETDDRLELFFDSSPEV 226
Query: 249 LEDMKDQLRKRMF-----------SKRIVKRISFIIANGLSIELNTYALIRP----TVPG 293
E++ +L +R S R +++ I + + N +P VP
Sbjct: 227 AEEIDYRLSERTLCELQSEIEKGISMRSFSTVNWFITSSFDGDGNLQR--KPKNDLAVPV 284
Query: 294 AITWLDSVT-NHPLKTERS------------FICADTG-ALMQEPAKRFQPYKGENIKFS 339
+ L + N+ E+S + +TG LM R + + F+
Sbjct: 285 KVIHLCIASKNYKKSKEKSSRDNKDIVKTSRILSKETGEILMGSDIVRSIDVGPDRVIFT 344
Query: 340 VQELSEIKRVST-GHLRLHG--FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHR 396
+E+ I+ + +R G F S ++ +N + S F+ P++K G+T +F +
Sbjct: 345 NEEVQRIRTMGLPKEIRSLGYCFMSKSLVEQRYNYKGSYFLIPNEKAGNGTTAVFHSFIE 404
Query: 397 SMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVE-PPGMHMIYLPYSDDIRPVE 453
M++ + ++ + N P+L AL+ Q RA + P G H+++LP+ +IR +
Sbjct: 405 VMIKEDVASLCYIKLRENAEPKLAALLPQ----RASDVDDVPAGFHVVFLPFKGNIRKIP 460
Query: 454 ELHSDTDAVPRASDDEVKKAAA-LMKRIDLKDFSVCQFANPSLQRHYAVLQALAL----E 508
P D+ ++ AA+ L+K ++ + F F NP + + L+A AL
Sbjct: 461 ---PHPQVCPDKVDEGLQNAASELVKSLNYESFPT-SFENPHIVKWMTHLEAHALGTEAN 516
Query: 509 EDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATEN 568
E ++ E + PDE M +V VE K S G+ + V+ + KR
Sbjct: 517 EKEVEEALAKIRPDEAAMGSKKIVSIVERIKSSA-GETF-----VEGEQGPAKR------ 564
Query: 569 AAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTG-RKETLISRILTH 620
KE + + D+ L + V +LK + TG RK+ LI + H
Sbjct: 565 VKKETTTFK-VEGEDEIVLDNLKVDQLKEMCKGFGIRVTGKRKDELIQALKDH 616
>gi|195037739|ref|XP_001990318.1| GH18304 [Drosophila grimshawi]
gi|193894514|gb|EDV93380.1| GH18304 [Drosophila grimshawi]
Length = 624
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 238/556 (42%), Gaps = 59/556 (10%)
Query: 97 NAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQG 156
N V N A + + T ++ F S E+ S+YG+ S + +
Sbjct: 88 NIVVPANCAIFLPMRQLTKAIVEHFLEFMASAEELFASEYGLAQPDGRGSYAYMIRLCIE 147
Query: 157 LLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSP 216
LL K K + +I+ T+ ++P + + +Q+A D + +++P+
Sbjct: 148 LLEKCGKKLNNAKIVYITDVEEPH-----PQSSREFQAALQKASDLEGKEFEFQVIPMI- 201
Query: 217 PDEEFKVSHFYADMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA 274
++F FY + I L D+ F +P A + E ++D+ ++ F +R + + +
Sbjct: 202 --DDFDYEPFYKEFITLSRAIDIDSFRVPDAQLQREILEDRKLRQDFLRRCLGHFNLSLG 259
Query: 275 NGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQ---- 329
L+I + Y R P + L N ++ +R + QE +Q
Sbjct: 260 PNLAISVQFYNYFQRRAYPNKVHILRR-DNSVVRKKRMIMVRKQDEETQEITHEYQIKTT 318
Query: 330 ------PYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
+ ++ + ++L+ ++ + + L GFK S L D H +P +F++P D+
Sbjct: 319 GGWHECRVGDQVLRVTTEQLNRVRNLHPPGMMLLGFKHRSALPDIHYSKPCSFMYPDDQN 378
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALV----AQDEIVRAGGQVEPPG 437
+VGS +F AL + L + A+ + S PR VAL+ AQ + + G
Sbjct: 379 IVGSKRLFRALWQRCLERQKIAICLFMCKRKSVPRYVALLPVEAAQPDDTNYRSLLSGDG 438
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASDDE-VKKAAALMKRIDLKDFSVCQFANPSLQ 496
++YLP + IR ++ + +++ S DE V+ ++KR+ + D+ +P+L+
Sbjct: 439 FKIVYLPEAKHIRNID--MCEWNSIKNTSSDEGVELFQKVIKRLSV-DYQPNFINDPNLE 495
Query: 497 RHYAVLQALAL----EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGD 552
+ L ALAL E+D + ++ D V D K +E+F L +Y + E +
Sbjct: 496 VLQSNLLALALNIKTEQDGISQLPDPAVQD----------KRIEKF-LPLYDKIFGPEVE 544
Query: 553 VKVSEASRKRKAATENAAK-------ECANYDWA-DLADKGKLKEMTVQELKLYLMAH-- 602
A+ K A+ E+AAK + + D L + +L T ++L+ L H
Sbjct: 545 PAKKRAA-KSSASDESAAKMPKIDEEQLKSLDIVKQLIEDKRLSSCTSEQLRFILDQHFD 603
Query: 603 -NLSTTGRKETLISRI 617
+ + K LI RI
Sbjct: 604 VRPAKSTTKAVLIERI 619
>gi|357614085|gb|EHJ68897.1| hypothetical protein KGM_11435 [Danaus plexippus]
Length = 594
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 180/420 (42%), Gaps = 34/420 (8%)
Query: 126 ESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKG 185
E++EK + + ++E +L + LW + K + + +++ T D P
Sbjct: 89 ENYEKLKNTNICNLVEAKEFNLSDVLWHCSKMFNSCKKKLSSRTVVMLTRLDVP----PA 144
Query: 186 AAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSA 245
A+ D T + RA D D I I+++ +S + E+ + +Y ++ + P
Sbjct: 145 ASDKDQT---LNRAIDLVDSNIDIKIINIS--ETEYVIDKYYEKLLKIANRGSDCIPPKP 199
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPG--AITWLDSVTN 303
+ D++ + + + +I+F I + +I ++ Y L++ LD +N
Sbjct: 200 VWNINDIEKIVFQETHRNIAIAKINFEIGDTFNIGVSVYTLLKKAGQNNKKNINLDRESN 259
Query: 304 -------HPLKTERSFICADTG-------ALMQEPAKRFQPYKGENIKFSVQELSEIKR- 348
+ LK I D+ L++ +Q + GE ++F+ +E+ IK
Sbjct: 260 AIVTSIKNTLKVSNDVIDEDSQDRSKRKVPLLKSELLHYQEFGGERVEFTDEEMKMIKNP 319
Query: 349 VSTGHLRLHGFKPLSYL-KDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA 407
++L GFKP S + K+ + F++P++ + GST F ALH + + A+
Sbjct: 320 FGPPMMKLLGFKPASIICKEKWYFKIGQFLYPNESIIEGSTVAFKALHEACTVMKMVALC 379
Query: 408 FYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD 467
N R V +VA V+ G ++ +P+ + +R EL+ + D + S
Sbjct: 380 ILCTRVNSRPV-IVALSPCVKPLNLNIDIGFDIVNIPFVEHVR---ELNVEEDVIEDESL 435
Query: 468 DEVKKAAALMKRI---DLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEE 524
LMK I + D+ F +P LQ Y ++ALAL+ED+ D T P E
Sbjct: 436 VVESAHKELMKGIINNTIIDYRPDMFEDPKLQSKYRAIEALALDEDETEPFVDTTKPSIE 495
>gi|198423929|ref|XP_002123200.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 233
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 19/242 (7%)
Query: 387 STCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIV--RAGGQVEPPGMHMIY 442
S+ F AL + L + A+ + ++ R +AL+ Q E + Q++P G ++Y
Sbjct: 1 SSTFFTALLQKCLDKDYVAICRFVPRTSASMRNIALLPQREEIDPETSEQIKPSGFFIVY 60
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LP++DD+R E P S+++V+ A ++++++ K + F NP+LQ HY L
Sbjct: 61 LPFADDVRETELPEEQ----PSPSEEQVQSAESIIRKLRFK-YDPNSFDNPALQTHYKNL 115
Query: 503 QALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDV---KVSEAS 559
+A+ALE++ + D T PD E + R V VE FK V+ NYD K ++ +
Sbjct: 116 EAMALEKEAPDPVTDHTAPDVERIDR-KVGPLVETFKSLVFPQNYDPTKTATKHKSNQTT 174
Query: 560 RK-RKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
R+ ++A TEN A + + + L + TV +LK + TG+K LIS I
Sbjct: 175 RESKRAKTEN-----AEVNIQEAVNNNALGKYTVVQLKEICRELEVKCTGKKADLISAIT 229
Query: 619 TH 620
+
Sbjct: 230 AY 231
>gi|195444631|ref|XP_002069956.1| GK11797 [Drosophila willistoni]
gi|194166041|gb|EDW80942.1| GK11797 [Drosophila willistoni]
Length = 630
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 230/537 (42%), Gaps = 52/537 (9%)
Query: 97 NAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQG 156
N V N A L + T ++ + S ++ + YG+V R N + +
Sbjct: 92 NIVVPMNCAVFLPLRQLTKPIVEHYLQFIVSADELFATDYGLVENGRGN-FAATIRLCIE 150
Query: 157 LLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSP 216
LL K K + +I+ T++D P A N+ + +Q+A D + ++P+
Sbjct: 151 LLEKCGKKLNNAKIVYITDKDTP----HPVASNEF-QAALQKASDLEGKEFEFHVIPMI- 204
Query: 217 PDEEFKVSHFYADMIGLEG--DDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA 274
+EF FY + I L D A +P A E + D+ K+ F +R + + +
Sbjct: 205 --DEFDYEPFYKEFITLSRAIDIDAFQVPDAQLLREILADRKLKQDFLRRCLGHFTLKLG 262
Query: 275 NGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQ---- 329
L+I Y R P + L N ++ +R + + Q+ FQ
Sbjct: 263 PNLAISAQYYNYFQRRAYPNKVHILRE-DNSVVRKKRVIMVREQDEETQDIKHEFQIKST 321
Query: 330 ------PYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
EN++ + +L+ ++ + L GFK S L + +P+ F++P D+
Sbjct: 322 DGWYECKMGEENLRITNTQLNIVRDFHRPEMMLLGFKHRSSLPEVIYSKPANFMYPDDQN 381
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALV------AQDEIVRAGGQVEP 435
++GS +F AL + L + AV + S PR VALV ++D R+ +
Sbjct: 382 IIGSKKLFRALWQRCLEREKIAVCLFLAKRKSVPRYVALVPVEAEQSKDNNYRS--LLSG 439
Query: 436 PGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSL 495
G ++YLP + IR ++ ++ A ASD+EV ++K++ + D+ +P+L
Sbjct: 440 DGFKIVYLPEAKHIRNIDLCDWNSTA-NTASDEEVDLFQKIIKKLRI-DYQPNMINDPNL 497
Query: 496 QRHYAVLQALALE--EDD--MPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYD--E 549
+ + L AL+L+ DD + ++D V DE + K + E++ ++G+ + +
Sbjct: 498 ELLQSNLLALSLDIKTDDRGLARVQDPVVQDER------IAKFLPEYE-ELFGNEIEPAK 550
Query: 550 EGDVKVSE----ASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAH 602
+ SE ASR K A + + +N L G+L TV +L L H
Sbjct: 551 KRSAPRSEASVGASRAPKVAKIDGEQLGSNEYVNQLIADGRLTNCTVAQLCQILKTH 607
>gi|125778448|ref|XP_001359982.1| GA18760 [Drosophila pseudoobscura pseudoobscura]
gi|54639732|gb|EAL29134.1| GA18760 [Drosophila pseudoobscura pseudoobscura]
Length = 633
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 131/587 (22%), Positives = 245/587 (41%), Gaps = 77/587 (13%)
Query: 78 DEVAICFFNTRKKKNLQDLNAVFVFNVAER-------EQLDRPTARFIKEFDHIEESFEK 130
D + + F NT+ + + V V E QL +P EF + E+
Sbjct: 71 DLIGLVFANTKHSPLPLEASCVETIVVPENCAVFLPLRQLTKPIVEHYLEF---MGTVER 127
Query: 131 EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
+ ++YG+V + + LL K K + +I T+ D P ++
Sbjct: 128 QFATEYGLVEPDGRGKFDLMIRLCIELLEKCGKKLNNAKIAYVTDVDTPH-----LPSSN 182
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFM-PSAGQK 248
+ +Q+A D + ++P+ +++F FY + I L +L F+ P
Sbjct: 183 EFQAALQKAIDLEGKEFEFHVIPM---NDDFDYGPFYKEFITLSRAIELDAFVEPDPSLL 239
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITWLDSVTNHPLK 307
E + D+ K+ F +R + +F + LS+ + Y R +P + + N +
Sbjct: 240 REMLADRKLKQDFLRRCLGHFAFHLGPNLSMSVQYYNYFQRRALPRKVQIMRR-DNSVVS 298
Query: 308 TERSFICADTGALMQEPAKRFQP------YK---GE-NIKFSVQELSEIKRVSTGHLRLH 357
T+R I +E +Q YK GE +++ ++ + ++ + H++L
Sbjct: 299 TKRQIIVRKHEG--EEIKHEYQMKANQGWYKFDLGEKSLRLTMTRMDMVRNMHKPHMQLL 356
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN--PSNP 415
GFK S L + +PS F++P D+ ++GS +F L L+ + V + + S P
Sbjct: 357 GFKHRSALPEVLYSKPSNFMYPDDQSIIGSKRLFRGLWERCLQREKIIVCLFMSKRKSIP 416
Query: 416 RLVALVA----QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE-V 470
R V LV + E+ Q+ G ++YLP + IR ++ D + ++DDE V
Sbjct: 417 RYVVLVPVQVDKSEVKSYRSQLCGDGFKIVYLPEAKHIRHID--MCDWNNTANSADDEKV 474
Query: 471 KKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALAL----EEDDMPEIKDETVPDEEGM 526
++KR+ + D+ +PSL A L AL+L + + E+ D T D+
Sbjct: 475 DFFQKIIKRLRI-DYQPNLINDPSLDYLQANLLALSLDITTDSKGIDELLDTTAQDK--- 530
Query: 527 ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAA----------KECANY 576
++ Y +Y+ DV+ A ++ A+ N A K+ +Y
Sbjct: 531 ------------RIEKYMPDYERLFDVEAVPAKKRPAKASANGASSSKMPKIDMKQIESY 578
Query: 577 DWAD-LADKGKLKEMTVQELKLYLMAH---NLSTTGRKETLISRILT 619
++ + L + +L TV +L+ L H NL + K+ L+ I+
Sbjct: 579 EFVEYLIAEERLTSCTVAQLQWILQKHFDENLPKSSPKDRLVKCIVA 625
>gi|290971360|ref|XP_002668477.1| predicted protein [Naegleria gruberi]
gi|284081903|gb|EFC35733.1| predicted protein [Naegleria gruberi]
Length = 555
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 110 LDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGL--LRKGSSKTAD 167
LD P A+ IK+ + + S K I S + S N+L+ ALW Q L L +SK
Sbjct: 60 LDIPDAKRIKQIESLIHS--KSITSTINVQS----NTLHEALWTCQHLFSLSNANSKLGF 113
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFY 227
KRI LFTN+D+P + + T++R +D + I I+L L P FK +
Sbjct: 114 KRIFLFTNDDNPHRDDQSSK-----LKTIERGRDLMNSEIEIQLFSLKIPANTFKFDLIW 168
Query: 228 ADMIGLEGDDLA--LFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIE----- 280
+I + DD + L+++KD++RKR F KR + I FII + +
Sbjct: 169 KQLIHVSDDDYTGRIQYDCLENGLKELKDKIRKREFKKRGITSIPFIIGDINNNNSNNSI 228
Query: 281 ---LNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA 319
Y+ I T A L S TN LK E FIC DTG
Sbjct: 229 ILNCTLYSCISKTRKPAAVHLHSDTNKLLKCETKFICQDTGT 270
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 470 VKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARP 529
+K+ + K++ + DF+ +F NPSLQ+ Y LQALALE ++ +I+D PD+EGM +
Sbjct: 341 IKQLKNITKKLTI-DFNPHEFTNPSLQQFYQSLQALALEHSNIEQIEDVLKPDKEGMKK- 398
Query: 530 GVVKAVEEFKLSVYGDNYD 548
+ EFK ++ +YD
Sbjct: 399 -YENLMNEFKDMIFPSDYD 416
>gi|195157892|ref|XP_002019828.1| GL12608 [Drosophila persimilis]
gi|194116419|gb|EDW38462.1| GL12608 [Drosophila persimilis]
Length = 633
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 130/587 (22%), Positives = 244/587 (41%), Gaps = 77/587 (13%)
Query: 78 DEVAICFFNTRKKKNLQDLNAVFVFNVAER-------EQLDRPTARFIKEFDHIEESFEK 130
D + + F NT+ + + V V E QL +P EF + E
Sbjct: 71 DLIGLVFANTKHSPLPLEASCVETIVVPENCAVFLPLRQLTKPIVEHYLEF---MGTVES 127
Query: 131 EIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKND 190
+ ++YG+V + + LL K K + +I T+ D P ++
Sbjct: 128 QFATEYGLVEPDGRGKFDLMIRLCIELLEKCGKKLNNAKIAYVTDVDTPH-----LPSSN 182
Query: 191 MTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALFM-PSAGQK 248
+ +Q+A D + ++P+ +++F FY + I L +L F+ P
Sbjct: 183 EFQAALQKAIDLEGKEFEFHVIPM---NDDFDYCPFYKEFITLSRAIELDAFVEPDPSLL 239
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITWLDSVTNHPLK 307
E + D+ K+ F +R + +F + LS+ + Y R +P + + N +
Sbjct: 240 REMLADRKLKQDFLRRCLGHFAFHLGPNLSMSVQYYNYFQRRALPRKVQIMRR-DNSVVS 298
Query: 308 TERSFICADTGALMQEPAKRFQP------YK---GE-NIKFSVQELSEIKRVSTGHLRLH 357
T+R I +E +Q YK GE +++ ++ + ++ + H++L
Sbjct: 299 TKRQIIVRKHEG--EEIKHEYQMKANQGWYKFDLGEKSLRLTMTRMDMVRNMHKPHMQLL 356
Query: 358 GFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN--PSNP 415
GFK S L + +PS F++P D+ ++GS +F L L+ + V + + S P
Sbjct: 357 GFKHRSALPEVLYSKPSNFMYPDDQSIIGSKRLFRGLWERCLQREKIIVCLFMSKRKSIP 416
Query: 416 RLVALVA----QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE-V 470
R V LV + E+ Q+ G ++YLP + IR ++ D + ++DDE V
Sbjct: 417 RYVVLVPVQVDKSEVKSYRSQLCGDGFKIVYLPEAKHIRHID--MCDWNNTANSADDEKV 474
Query: 471 KKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALAL----EEDDMPEIKDETVPDEEGM 526
++KR+ + D+ +PSL A L AL+L + + E+ D T D+
Sbjct: 475 DFFQKIIKRLRI-DYQPNLINDPSLDYLQANLLALSLDITTDSKGIDELLDTTAQDK--- 530
Query: 527 ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAA----------KECANY 576
++ Y +Y+ DV+ + ++ A+ N A K+ +Y
Sbjct: 531 ------------RIEKYMPDYERLFDVEAVPSKKRPAKASANGASSSKMPKIDMKQIESY 578
Query: 577 DWAD-LADKGKLKEMTVQELKLYLMAH---NLSTTGRKETLISRILT 619
++ + L + +L TV +L+ L H NL + K+ L+ I+
Sbjct: 579 EFVEYLIAEERLTSCTVAQLQWILQKHFDENLPKSSPKDRLVKCIVA 625
>gi|219119043|ref|XP_002180288.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408545|gb|EEC48479.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 746
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 126/526 (23%), Positives = 219/526 (41%), Gaps = 73/526 (13%)
Query: 144 ENSLYNALWV---AQGLLRKGSSKTAD-KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+ +L++AL V A+ + + ++ AD + + +FTN P S R +Q A
Sbjct: 223 QTALFHALQVFGRAKCVRKTTPTRPADWQHVWIFTNNAHPVSSDGDDPDGCSQRQLLQTA 282
Query: 200 -KDAQDLGISIELLPL-SPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLR 257
DA + GI + + PL + PD++ S Y + ++ + +A L D+ +
Sbjct: 283 LHDAAEAGIDVTVWPLPNGPDQDNVDSSVYEQL------EMDVAPSTAWTLLVDILPETH 336
Query: 258 KRMFSKRIVKRISFIIA-------NGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTER 310
++ R + ++ N +I+LN Y L++ + P + T L+
Sbjct: 337 RQWKQARRAVGVPLLLPDWKERPPNDPNIQLNLYRLVQESRPPKQYHVHQETGRALEKLT 396
Query: 311 SFICADTGALMQEP-------------AKRFQPY---KGENIKFSVQELSEIKRVSTGH- 353
+ L+++ A R Q Y GE I S + I+R +
Sbjct: 397 QTVTVRGSELLEQSWGTGHAKNSWGGGADRIQTYVEFGGEKIPMSYADRDAIRRSCNANP 456
Query: 354 ----LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA-- 407
L L GF + H + S F P ++ V GST F LH SMLR AV
Sbjct: 457 DFASLILLGFHDDQSIPLAHTMERSYFCVPDEESVEGSTAAFAHLHASMLRKKVVAVGEL 516
Query: 408 FYGNPSNPRLVALVA----------QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHS 457
+ RLVALV DE+ + P GM ++ LP+ D++R +++ +
Sbjct: 517 LTKVTAAARLVALVPLPEERVDSHFDDELPEI---LRPAGMLVVSLPFEDEVRELDDDEA 573
Query: 458 ----DTDAVPRASDDEVKKAAALMKRIDLKDFSVCQ-FANPSLQRHYAVLQALALEEDDM 512
+ AS D VK A L++R + + + F N +L + + ++ +ALEE M
Sbjct: 574 TNVWEATGTDVASPDLVKAATKLIQRQIIDSIRIGENFENAALLKMWNYIEHVALEE-PM 632
Query: 513 PEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKE 572
PE P E + +V ++ V+ N + D V + RKRK ++
Sbjct: 633 PE-----QPASETILDKDLVLERARHEIDVFLANLPD--DSIVEKMPRKRKVEPDD---- 681
Query: 573 CANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRIL 618
+ DW + + + E T +LK L + +G+K+ LI R++
Sbjct: 682 -SRLDWFTIWSRDQYFECTNSDLKKKLRSCGEKVSGKKQDLIDRLV 726
>gi|119623205|gb|EAX02800.1| hCG18775, isoform CRA_a [Homo sapiens]
Length = 217
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 356 LHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN- 414
L FKPL LK++H RPS F +P + V GS+ +F AL L A+ Y N
Sbjct: 2 LMVFKPLVMLKEHHYPRPSLFTYPEESPVNGSSTLFSALLIKCLEKVVIALCRYTPRRNI 61
Query: 415 -PRLVALVAQ-DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKK 472
P LVALV+Q +E+ QV PG +++LP++DD R V T+ V A+ ++V
Sbjct: 62 PPYLVALVSQEEELDDQKIQVTTPGFQLVFLPFADDKRKV----PFTEKV-MATPEQVDN 116
Query: 473 AAALMKRIDLKDFSVCQFANPSLQRHYAVLQALAL---EEDDMPEIKDETVPDEEGMARP 529
A+++++ + F NP LQ+H+ L+ L L EE + D +P E M +
Sbjct: 117 MKAIIQKLCF-TYRSDSFENPVLQQHFGNLEPLILYLMEEQAV----DLILPKVEEMNK- 170
Query: 530 GVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENA 569
+ V EFK VY +Y+ EG + KRK E +
Sbjct: 171 RLGSMVNEFKELVYSPDYNPEGKIT------KRKCNNEGS 204
>gi|356536579|ref|XP_003536814.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
max]
Length = 66
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
Query: 515 IKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEE---GDVKVSEASRKRKAATENAAK 571
+KDET+PDEEG+ARP VV+A+EEFK SVYGDNY+EE G K +EAS+K+KA E A K
Sbjct: 1 MKDETLPDEEGLARPAVVRALEEFKTSVYGDNYEEENKPGTGKPTEASKKQKAIAEFATK 60
Query: 572 ECANYD 577
EC NYD
Sbjct: 61 ECENYD 66
>gi|145349578|ref|XP_001419207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579438|gb|ABO97500.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 341
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 49/334 (14%)
Query: 333 GENIKFSVQELSEIKRVS---------TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKE 383
G+ + FS +EL ++K V T L GF + L+ S FV +K
Sbjct: 3 GKQLIFSNKELGKVKTVKIPGVENAKDTVGFHLVGFVDAKTITRDLCLKKSHFVAGEEKG 62
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSNP--RLVALVAQ--------DEIVRAGGQV 433
F L R+ + N+ A+ + R VAL+ Q A ++
Sbjct: 63 CAA----FQGLLRACVEENKVAICALSRSTRSALRYVALLPQLAPSADEIAAADDAVSRL 118
Query: 434 EPP-GMHMIYLPYSDDIR-PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFA 491
EPP G H+ YLP+ DD R P + S+ +PRA++ ++ A +++ I L + Q
Sbjct: 119 EPPEGFHVFYLPFRDDTRHPERAVASEKAPLPRANEAQITAARSVIDAIRLTQWHPKQTP 178
Query: 492 NPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNY---D 548
NP+LQ HY VL+ ALE + M + D+T P + R G+ + F +G + D
Sbjct: 179 NPALQTHYRVLEMCALERNVMEPVHDDTEPALDEWQRAGIPALLAGFDAECFGASRAIDD 238
Query: 549 EEG------DVKVSEASRKRKAATENAAKE--------------CANYDWA-DLADKGKL 587
G DV + KRKA + ++ + + L
Sbjct: 239 LHGRAAPAVDVTGATIGAKRKAIEAPKPRSPPARAHRPEPIMTIAPHHAFVIERVKADAL 298
Query: 588 KEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+T LK +L AHNLS G K L R+ H+
Sbjct: 299 TSLTTDALKRFLAAHNLSCAGSKAQLCDRVECHV 332
>gi|255081572|ref|XP_002508008.1| predicted protein [Micromonas sp. RCC299]
gi|226523284|gb|ACO69266.1| predicted protein [Micromonas sp. RCC299]
Length = 780
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 33/297 (11%)
Query: 354 LRLHGFKPLSYLKDY-HNLRPSTFVFPSDKE-VVGSTCIFIALHRSMLRLNRFAVAFYGN 411
+ L GF+P + + +P+ + P ++ GST F AL +M+ +R A+A Y
Sbjct: 486 IHLLGFRPRGAIGRWARTSKPARLMVPEEESRQAGSTAAFTALCEAMVAKDRVAIAAYAR 545
Query: 412 P----SNPRLVALV----------AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHS 457
+ R VALV D+ ++ G+H++ LPY DD+R E H+
Sbjct: 546 TDDRFAGVRCVALVPCVEAAEAADDDDDDDDDANDLKIIGLHVVDLPYLDDVRHPELAHA 605
Query: 458 DTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALE----EDDMP 513
V +AA R+D +S NPSL RHY L+ AL+ E D
Sbjct: 606 TGGVVAGPDAIAAAEAAIEANRVD--HYSPLDVPNPSLSRHYRALEIQALDRAWTESDEL 663
Query: 514 EIKDET-VPDEEGMARPGVVKAVEEFKLSVYGDNYDEEG--------DVKVSEASRKRKA 564
E D T PD + + G+ + + FK +VYG N+D E VK S A +
Sbjct: 664 EAGDVTKPPDAAELEKLGIKEKMIAFKAAVYGTNHDAEALEDAAAGPGVKRSGAGAGKLG 723
Query: 565 ATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+ + A+ D+ LA L+ +TV +LK + A+ L+ G K L RI H+
Sbjct: 724 S--GLGQTLADIDFRALAAANDLERVTVAKLKEFCAANGLAVGGAKAALCERIKDHL 778
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 28 KEYVVYLVDASPKMF----STTCPAEDQTDETH----------FHIAVSCIAQSLKTQII 73
+E +V+L+DASP MF ++ + D TH +AV C L+++I+
Sbjct: 85 RESIVFLIDASPAMFLPAPASIAASGDNRVATHTTAGGSSRSFVDVAVDCARSVLRSRIV 144
Query: 74 NRLYDEVAICFFNTRKKKNLQDLNAVFVF-----NVAEREQLDRPTARFIKEF-DHIEES 127
+ D + FF T + D NV ++++ P+AR I++ D +
Sbjct: 145 STPNDRQGVAFFATTNARGTADDAGAGAGGGARENVWVEQRMNVPSARRIQDLADLVGAD 204
Query: 128 FEKEIGSQYGIVSGSREN---------------SLYNALWVAQGLLRK-----GSSKTAD 167
+ + + G V G EN S Y+AL A + R+
Sbjct: 205 GNRRLREKIG-VEGGEENTDGGGDGNRTRDGVASYYDALLRAHHVAREMLNDHAPGAKVR 263
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS 215
KR+LLFTN D P G ++ + + +D + +++ LP +
Sbjct: 264 KRLLLFTNRDAPLAGGTGEDGRELI-SAWREFRDVHRIDVTLYSLPYT 310
>gi|194743446|ref|XP_001954211.1| GF16859 [Drosophila ananassae]
gi|190627248|gb|EDV42772.1| GF16859 [Drosophila ananassae]
Length = 631
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 117/534 (21%), Positives = 225/534 (42%), Gaps = 62/534 (11%)
Query: 7 DVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQ 66
D+ ++E D +++ +E ++++VDA+ + T E D A++ I
Sbjct: 11 DLLSCSEDEEDVAMKRDYHG-REALLFVVDANLQ----TAGTERLMD------ALNIIRT 59
Query: 67 SLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAERE---------QLDRPTARF 117
+ + ++ D + + F NT K + L A + N+ E QL++
Sbjct: 60 AFTSGLLVSDKDLIGLVFANT--KHSPLPLEATAIDNIVVPENCAVFLPLRQLNKAIVEH 117
Query: 118 IKEF-DHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNE 176
EF +E F KE YG+ + + LL K K + +I T+
Sbjct: 118 YLEFMGGVELQFAKE----YGLAEPDGCGRFDLMIRLCIELLEKCGKKLNNAKIAYITDV 173
Query: 177 DDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEG- 235
+ P A + +Q+A D + ++P+ ++F FY + I L
Sbjct: 174 NTPHPPSSNAFQ-----AALQKATDLEGKEFEFHVIPMV---DDFDYEPFYKEFITLSRA 225
Query: 236 -DDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPG 293
D A +P E + D+ K+ F +R + SF I LS+ + Y + P
Sbjct: 226 IDIDAFQVPDPHVLREILADRKLKQDFLRRCLGHFSFYIGPNLSMSVQYYNYFQKHNYPK 285
Query: 294 AITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQ----------PYKGENIKFSVQEL 343
+ L N+ ++++R + QE +Q GEN++ + ++
Sbjct: 286 KVQILRR-DNNVVRSKRVIMVQQKDEESQEVKHEYQIKATGGWYNCNVGGENLRIGIDKI 344
Query: 344 SEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNR 403
+ ++ + + L GFK S + ++ +PS F++P D+ ++GS +F L L ++
Sbjct: 345 NSVRNLHKPRMMLLGFKHRSSMPEFSYSKPSNFMYPDDRSIIGSKRLFRGLWERCLARDK 404
Query: 404 FAVAFYGNPSN--PRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEE 454
A+ + + N PR VAL+ QD R+ + G ++YLP + IR ++
Sbjct: 405 IAICLFMSKRNSTPRYVALIPVEAPERGQDTSYRS--LLCGDGFKIVYLPEAKHIRHIDM 462
Query: 455 LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALE 508
++ A ASD+ V+ ++K++ D+ +P+L+ A L AL+L+
Sbjct: 463 CDWNS-AGNSASDEGVEFFQKIIKKLRF-DYQPNLINDPNLEALQANLLALSLD 514
>gi|156550153|ref|XP_001606141.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Nasonia
vitripennis]
Length = 593
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 146/647 (22%), Positives = 265/647 (40%), Gaps = 111/647 (17%)
Query: 14 EESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQII 73
EE +NE +TKEY+V+L+D +P+M+ P ++ ET+ +I ++T+
Sbjct: 17 EEKENEL-----STKEYIVFLIDGTPQMYENDSPFL-RSLETYRNI--------VRTKCS 62
Query: 74 NRLYDEVAICFFNTRKKK-NLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEI 132
D++ + F T+ K +++ L + F+V + L ++ K+
Sbjct: 63 RNRRDKLGVMVFGTKDKNCDVEHLTVLQEFDVVTVDTL------------KTVQTILKDE 110
Query: 133 GSQYGIVSGSRENSLYNALWVA-QGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
++Y ++ + SLYN L A Q LL GSS I+L T D+P A++
Sbjct: 111 ANKYKEMASVAKYSLYNVLTHAYQTLLTSGSSLKTSNTIVLCTCNDNP------CAEDSS 164
Query: 192 TRTTMQR-AKDAQDLGISIELLPLSPP--DEEFKVSHFYADMIGLEGDDLALFMPSAGQK 248
R +Q +D ++++ LS DE +K A G DD K
Sbjct: 165 ERRRIQHLIATFKDTKTRLQVIGLSKSWNDEYYKDLQIIA---GTFSDDFDY----RRLK 217
Query: 249 LEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIR-PTVPGAITW-------LDS 300
L D + + + + + ++ + I +++E++ Y L+ PT P + LD+
Sbjct: 218 LNDFEQIV---LNPAKSICKLPWKITPDIAVEVSVYNLVSTPTYPTKVKLEKGENEILDA 274
Query: 301 VTNHPL----KTERSFICA-------------DTGALMQEPAKRFQPYKGENIKFSVQEL 343
V PL ++E F+ + D + + Y + F +E+
Sbjct: 275 V---PLLQEKRSESDFLNSGPTDFVENANDGDDKQIITSHNIMYCKTYSDVTVYFKPEEV 331
Query: 344 SEIKRVST-GHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLN 402
+IK + +++ F+ + YH P F+ + S F A
Sbjct: 332 KQIKNLGLEPGIQILAFRKVVVDPLYHVESPY-FISYTSLSSYESKTFFRAFVSKCYDRK 390
Query: 403 RFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEE----LHSD 458
A+ ++ A++ R G G +M LP+ D +R +++ +
Sbjct: 391 VMAICKVVTKIAVKICAMIPS----RTDG-----GFYMYKLPFIDTVRELDKQLPHFVFN 441
Query: 459 TDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDE 518
D + + + LM+ +K F + F NP L++ A ++ALAL+E D
Sbjct: 442 PDNPCKMNKKAINLFEELMELTKVK-FDIKNFTNPKLEKCIAHIEALALDEKLGSLPPDS 500
Query: 519 TVP----DEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECA 574
T+P DE M VEE + D+ E ++KR + AA++
Sbjct: 501 TLPPPLKDETKMY-------VEELTRLL---------DLSSEEEAQKRPGSQATAARKRP 544
Query: 575 NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+D ++A K L +TV +L+ YL++ N T G K LI RI ++
Sbjct: 545 RFDVEEMASKRALASLTVADLREYLVSANQPTVGIKSVLIQRIYDYL 591
>gi|195395588|ref|XP_002056418.1| GJ10937 [Drosophila virilis]
gi|194143127|gb|EDW59530.1| GJ10937 [Drosophila virilis]
Length = 624
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 174/417 (41%), Gaps = 38/417 (9%)
Query: 78 DEVAICFFNTRKKKNLQDL----NAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIG 133
D + + F NT+ Q+L N V N A L + T ++ + S E+
Sbjct: 65 DLMGLVFANTKHSPPPQELQCLENIVVPANCAVFLPLRQLTKAIVEHYLEFMASAEELFA 124
Query: 134 SQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTR 193
S+YG+ S + + LL K K + +I+ T+ ++P S + +
Sbjct: 125 SEYGLAEPDGRGSFAYMIRLCIELLEKCGKKLNNAKIVYLTDVEEPHPS-----SSREFQ 179
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL----EGDDLALFMPSAGQKL 249
+Q+A D + +++P++ ++F FY + I L E D + P A +
Sbjct: 180 AALQKASDLEGKEFEFQVVPMT---DDFNYDPFYKEFITLSRAIEIDSFRV--PDAQLQR 234
Query: 250 EDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYA-LIRPTVPGAITWLDSVTNHPLKT 308
E ++D+ ++ F +R + + + +SI Y R P + + N ++
Sbjct: 235 EILEDRKLRQDFLRRCLGHFTLSLGPNVSISAQYYNYFYRHVYPKKVHIMRR-DNSVVQK 293
Query: 309 ERSFICADTGALMQEPAKRFQ----------PYKGENIKFSVQELSEIKRVSTGHLRLHG 358
R I ++ +Q GE ++ + ++L+ ++ + + L G
Sbjct: 294 RRQIIVRQEDKDTEQITHEYQIKMTGGWYECKVGGEVLRVTTEQLNRVRNLHPPGMMLLG 353
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPR 416
FK S L D +P F++P D+ ++GS +F AL + L + A+ + S PR
Sbjct: 354 FKHRSALPDVIYSKPCNFMYPDDQNIIGSKRLFRALWQRCLEREKIAICLFLCKRKSVPR 413
Query: 417 LVALV----AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE 469
VALV AQ + + G ++YLP S IR ++ SD + + + DE
Sbjct: 414 YVALVPVEAAQPDDKNYRSLLSGDGFKIVYLPESKHIRRID--LSDWNKIDNTATDE 468
>gi|403177014|ref|XP_003335612.2| hypothetical protein PGTG_16384 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172690|gb|EFP91193.2| hypothetical protein PGTG_16384 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 301
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
Query: 354 LRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPS 413
L L GF+P L ++++ + +++P++ VGST F AL SM + N+ +
Sbjct: 7 LTLLGFRPRDELLWAYHVKHAYYIYPNEDTFVGSTRAFSALLHSMAKKNKIGYGLLRSRK 66
Query: 414 N--PRLVALVAQDEIV--RAGGQVEPPGMHMIYLPYSDDIRPVEELHS-DTDAVPRASDD 468
N P LVA++ Q E + Q+EPPGMH+ LP++DD+ P ++ D S +
Sbjct: 67 NDTPTLVAILPQLEDFDEASNTQMEPPGMHLCVLPWADDLNPPPTVNQLDCLKQEDESSN 126
Query: 469 EVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
+ + A + R D++ + NP+LQ HY L A L E P +DE++P +
Sbjct: 127 HITELAEKIVRKLRVDYAGNKIHNPALQHHYDFLAAKYLNEKFEP-AEDESLPWYPSIKE 185
Query: 529 ---PGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDWADLADKG 585
P + + +EE L D + + S ++KR+ + + + A + G
Sbjct: 186 RCGPLIKELIEEIDL----DPRAADSVIPASSITKKRRRIEDGEGVDVEVVESAFAS--G 239
Query: 586 KLKEMTVQELKLYLM 600
K K +TV LK YL+
Sbjct: 240 KEKTLTVILLKEYLI 254
>gi|407410736|gb|EKF33063.1| KU70 protein, putative [Trypanosoma cruzi marinkellei]
Length = 852
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 145/328 (44%), Gaps = 46/328 (14%)
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPSDKEVV- 385
G + F+ +E I +T + GF L + L+ H + S+F+ P+ +
Sbjct: 523 GRRLFFTPRERQHIVLTATAGAPV-GFSILCFKYKEDILQHKHVICKSSFLRPNPYDGGE 581
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGGQVEPP---GMHM 440
S +F+ L R+++R N+ AVA Y + PRLVALV V P G+++
Sbjct: 582 ASLRLFVQLTRTLVRQNKVAVAQYVARRGAAPRLVALVPSSSAVPVPTCSLPAKGLGLYV 641
Query: 441 IYLPYSDDIRPVEELHS-DTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+ LPYS+DIR V L ++ +P S ++V A ++ + + + + NPSLQ Y
Sbjct: 642 VPLPYSEDIRDVPSLPCFNSATIP--SQEDVDLATGIVSCLSV-SYDINAVPNPSLQLRY 698
Query: 500 AVLQALALEEDD-----MPE--------IKDETVPDEEGMARPGVVKAVEEFKLSVYGDN 546
VL+ + L + MPE + D ++PD EGMAR EF + G +
Sbjct: 699 QVLKEMTLRQATESGAMMPEKSGNKPGTMADMSLPDREGMAR--YAPLFHEFNAKLLGPS 756
Query: 547 YD-----------EEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQEL 595
YD E K A ++ A + ++ L +TV +L
Sbjct: 757 YDADRLCPQPKRSEVAGAKTLRAGTGGHREGDDGVDNAAIHLVETAFEQNALPTLTVMQL 816
Query: 596 KLYLMAHNLSTTG--RKETLISRILTHM 621
K YL A S G RK+ LI ++TH+
Sbjct: 817 KAYLSALGESAAGARRKDELIE-VVTHV 843
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 24/176 (13%)
Query: 50 DQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFN------ 103
++ T F AV C+ + + +++ D VA+ +NT + N+ +L +++ +
Sbjct: 137 NRITNTPFRDAVRCVLKLCQEKVLMSDKDLVALALYNTNTRNNIYELPGLYIVHPFSLLS 196
Query: 104 ---VAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGL-LR 159
V E E L A E F+K IG + E L + LW AQ + L
Sbjct: 197 VQSVWELEGL----AASGDVSSMTYEEFKKNIGH-----AQRNEVHLSDVLWAAQHMFLS 247
Query: 160 KGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS 215
S+ +RI +FTN+D+P KG + + R ++ + G+++E+ +
Sbjct: 248 LHSNVIKYRRIFIFTNDDEPH---KG--ETSEMEQCLARVRELYEAGVTLEVFAIG 298
>gi|351705651|gb|EHB08570.1| ATP-dependent DNA helicase 2 subunit 1 [Heterocephalus glaber]
Length = 358
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 55 THFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPT 114
T F +++ CI ++II+ D + + F+ T+K KN + ++V ++LD P
Sbjct: 29 TPFDMSIQCIESVYTSKIISSDRDLLGVVFYGTKKDKNSVNFKNIYVL-----QELDNPG 83
Query: 115 ARFIKEFDHIEESFEKEIGSQYGIVSGSR-ENSLYNALWVAQGLLRKGSSKTADKRILLF 173
A+ + E D + ++ + + + G R + SL LWV L K + KRI+LF
Sbjct: 84 AKQMLELDQCKG---QQGQNHFQDLIGHRCDYSLSEVLWVCANLFSDVQVKMSHKRIMLF 140
Query: 174 TNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL 233
TN+DDP GS AK RT +A D +D GI ++L+ L F +S FY +
Sbjct: 141 TNDDDPHGS--DNAKASQART---KASDLRDTGIFLDLMHLKKHG-GFDISLFYREE--- 191
Query: 234 EGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
E DD + + + ++L+ MK ++K F R
Sbjct: 192 ELDDQKIQVMANPEQLDKMKAIVQKLHFKYR 222
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 465 ASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEE 524
A+ +++ K A+++++ K + F NP LQ+++ L+ALAL+ + + D T+P E
Sbjct: 202 ANPEQLDKMKAIVQKLHFK-YRSDSFENPVLQQNFRNLEALALDLMEPEQAVDLTLPKVE 260
Query: 525 GM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAK----ECANYDWA 579
M R G + V+EFK VY +Y+ EG +A++K++ + +K E + +
Sbjct: 261 AMHKRLGSL--VDEFKDLVYPPDYNPEG-----KATKKKQDGESSGSKRPNTELSKEELK 313
Query: 580 DLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMGK 623
A KG L ++TV LK L +K+ L+ H K
Sbjct: 314 VHATKGTLGKLTVPMLKEACRVCGLKGGLKKQELLDAFTQHFLK 357
>gi|406602088|emb|CCH46331.1| hypothetical protein BN7_5924 [Wickerhamomyces ciferrii]
Length = 570
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 190/445 (42%), Gaps = 43/445 (9%)
Query: 143 RENSLYNALWVAQG--LLRKGSSKT-ADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+EN LY L Q L++K K + +I LFT+ D P + KN + R
Sbjct: 135 KENQLYEILVTLQDEFLIKKDFQKQYNNNKIFLFTDNDTPINPENVSQKNILRRL----Y 190
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQ---- 255
D D I+I ++ ++F Y+++ + D+ + + + D
Sbjct: 191 NDLDDAHINISPFLINSSYKQFD-PKIYSELFSITHDNPNDELEAGESSMFDGPSTKPID 249
Query: 256 ---LRKRMFSKRIVKRISF----IIANGLSIELNTYALIRPTVPGAITWLDSVTN--HPL 306
+++R+ ++ ++RI F I + L + + Y++ ++ N +
Sbjct: 250 VSIIKQRVLRRKEIRRIQFQCPLIFNDNLIVGVKGYSIYTHEKSQRNKYVYETENFRKNV 309
Query: 307 KTERSFICADTGALMQEPAKRFQPYKGEN--IKFSVQELSEIKRVSTGH---LRLHGFKP 361
++R F TGA + K ++ GE+ IK + ++ +++ + L+L GFK
Sbjct: 310 YSKRRFFNEKTGAEFDKTVKIYKFGSGEDDAIKLTNDQIFQLQTYDENYDCFLKLLGFKN 369
Query: 362 LSYLKDYH-NLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAF--YGNPSNPRLV 418
+ +H N FV P + + GS AL++S+ +L + A+ F P L
Sbjct: 370 EKFGNKFHYNTSKIPFVIPDEDKYDGSRRTLSALYQSLQKLEKIAILFGKLRKSGQPSLY 429
Query: 419 ALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMK 478
AL +I + P G +I LP+ DDIR + E + + S+D +++K
Sbjct: 430 AL----QITKTPF---PEGFMLIRLPFLDDIRKIPEGY---EYYNEPSNDLKLVTKSILK 479
Query: 479 RIDLKDFSVCQFANPSLQRHYAVLQ--ALALEEDDMPEIKDETVPDEEGMARPGVVKAVE 536
+ LK + + NPSLQ H+ +L L +E +D +I +E + + + +
Sbjct: 480 NLILKGYQPKDYKNPSLQLHFKILHDYLLQVEVEDESQIDGNEDNEENKLLQDDTLNKIH 539
Query: 537 EFKLSVYGDNYDEEGDVKVSEASRK 561
+ + V EG +K+ E R+
Sbjct: 540 QVRKRVEASQL--EGKMKIFENIRR 562
>gi|345317071|ref|XP_001515249.2| PREDICTED: X-ray repair cross-complementing protein 6-like, partial
[Ornithorhynchus anatinus]
Length = 197
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 28 KEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ +++LVDAS MF +D T F + + CI ++II+ D +A+ F+ T
Sbjct: 34 RDSLIFLVDASKPMFE--AQNDDADGPTPFDMTIECIRSVYTSKIISSDRDLLAVVFYGT 91
Query: 88 RKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQY--GIVSGSREN 145
K KN + V+V ++LD P A+ + E D F+ + G + ++ +
Sbjct: 92 DKHKNSVNFKHVYVL-----QELDNPGAKRVLELDQ----FKGDQGKAHFRTLIGHGADY 142
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR 198
+L ALWV L K + KRI+LFTNEDDP K A T+ T R
Sbjct: 143 TLSEALWVCSNLFSDVRLKMSHKRIMLFTNEDDPHAGDKAKAALARTKATDLR 195
>gi|71403428|ref|XP_804514.1| KU70 protein [Trypanosoma cruzi strain CL Brener]
gi|70867530|gb|EAN82663.1| KU70 protein, putative [Trypanosoma cruzi]
Length = 584
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 150/328 (45%), Gaps = 46/328 (14%)
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPSDKEVV- 385
G + FS QE I +T + GF L + L+ H + S+F+ P+ +
Sbjct: 255 GRRLFFSAQERQHIFLTATAGAPV-GFSILCFKHKEDILQHKHVICKSSFLRPNPYDGGE 313
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGGQVEPP---GMHM 440
S +F+ L R+++R N+ AVA Y + PRLVAL V P G+++
Sbjct: 314 ASLRLFVQLTRTLVRQNKVAVAQYVARRGAAPRLVALAPSSPAVPVPTCSLPANGLGLYV 373
Query: 441 IYLPYSDDIRPVEELHSDTDA-VPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+ LPYS+DIR V L A +P S ++V AA ++ + + + + NPSL+ Y
Sbjct: 374 VPLPYSEDIRDVPSLPCFNPATIP--SQEDVDLAAGIVSCLSV-SYDINAVPNPSLKLRY 430
Query: 500 AVLQALALEEDD-----MPE--------IKDETVPDEEGMARPGVVKAVEEFKLSVYGDN 546
L+ +AL + MPE + D ++PD EGMA+ +F + G +
Sbjct: 431 QALKEMALRQATESRVMMPEKSGNKPGTMADMSLPDSEGMAQ--YAPIFHDFNAKLLGPS 488
Query: 547 YDEE---GDVKVSEASRKRKAATENAAKECANYDWADLA---------DKGKLKEMTVQE 594
YD + K SE + ++ T + + D D A ++ L +TV +
Sbjct: 489 YDADRLCPQPKRSEFAGEKSLRTGSGGHREGD-DGVDNAAIHLVETAFEQNALSTLTVMQ 547
Query: 595 LKLYLMAHNLSTTG-RKETLISRILTHM 621
LK YL A ST G R++ + ++TH+
Sbjct: 548 LKAYLSALGESTAGARRKDEVIEVVTHV 575
>gi|340712776|ref|XP_003394931.1| PREDICTED: LOW QUALITY PROTEIN: x-ray repair cross-complementing
protein 5-like [Bombus terrestris]
Length = 593
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 127/647 (19%), Positives = 270/647 (41%), Gaps = 98/647 (15%)
Query: 11 DDDEESDNE-FYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLK 69
DDD E+D E Y + T ++++DA+P MF ++ D +F + + LK
Sbjct: 6 DDDIENDLEDLYGVRDGT----LFVIDATPSMF------KNDPDNPYFLQCIKQYKEVLK 55
Query: 70 TQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFE 129
+++ D + + F T ++ + ++L P+ +KE I+E +
Sbjct: 56 QKLVWDRQDWIGLVLFGTEIWDKDPEIKHILTL-----QKLGLPSRESMKEIMKIDEGNK 110
Query: 130 KEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKN 189
Y ++ S LY+ LW A + +R+++FT+ D+P N
Sbjct: 111 ---WKDYRDIASSTAYPLYDVLWHAAEVFSAIRITMPMRRVIIFTSCDNP-----PCNDN 162
Query: 190 DMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL----EGDDLALFMPSA 245
+ R +Q A D+ + + ++ L E + FY D+ L + DD
Sbjct: 163 EKHRIRVQ-ATSYSDIDLQLLVVGLG---ENWNHDLFYKDLEMLSKKIDEDDYNRI---- 214
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHP 305
L+D+ +Q++ R + ++ + + + I+++ +L T + +N P
Sbjct: 215 --SLKDIVEQVK---LPSRNMAQLPWRLGENVIIDVSLRSLSVKTSYLKKENISKXSNIP 269
Query: 306 LKTERSFICADTGALMQEPA----------------KRFQPYKGENIKFSVQELSEIKRV 349
L T ++ D ++E +++Q + GE I F+ E+ +
Sbjct: 270 L-TSHTYHVVDEDNDIEEVGDEESQQALLPILDIDIQKYQTFGGEKINFTPAEVRCLYTT 328
Query: 350 STGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY 409
+ L K +SY YH P FV PS +S + N+
Sbjct: 329 REIGIDLICMKHISYHPLYHVETP-YFVIPS---------------KSYRKDNKLLFGAL 372
Query: 410 GNPSNPRLVALVAQDEIVRAGG--------QVEPPGMHMIYLPYSDDIRPVEE-----LH 456
N + + ++ +I ++ G V+ G ++ +P+ ++++ + E ++
Sbjct: 373 LNKCEAKDLMIICAVKIRKSFGTSLYTMIPNVKCGGFYLYKIPFKENVQNISEYFPEYIY 432
Query: 457 SDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIK 516
D + P + V+ + K++ + +++ F+NP +Q + +++ALAL+ + +
Sbjct: 433 DDNEKKPPIVPNGVELLEQIXKKLSI-EYNPKLFSNPEVQDQHQMIEALALDLEKPEPLP 491
Query: 517 DETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANY 576
D+T+P + M + V + E+ V+ D D+ +++ ++K N + +++
Sbjct: 492 DDTLPKTDKMYK-LVNDLLNEYD-KVFMDKMDD-----INDDPPEKKHKKSNKVMKPSDF 544
Query: 577 DWADLAD---KGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
+ + G++ TV +LK L L +G+K+ LI+RI H
Sbjct: 545 SKNKIQEYLRTGQIATFTVPQLKQMLETLGLKLSGKKDELINRIEKH 591
>gi|71409305|ref|XP_807005.1| KU70 protein [Trypanosoma cruzi strain CL Brener]
gi|70870907|gb|EAN85154.1| KU70 protein, putative [Trypanosoma cruzi]
Length = 852
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 52/331 (15%)
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPSDKEVV- 385
G + FS QE I +T + GF L + L+ H + S+F+ P+ +
Sbjct: 523 GRRLFFSAQERQHIFLTATAGAPV-GFSILCFKHKEDILQHKHVICKSSFLRPNPYDGGE 581
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGGQVEPP---GMHM 440
S +F+ L R+++R N+ AVA Y + PRLVAL V P G+++
Sbjct: 582 ASLRLFVQLTRTLVRGNKVAVAQYVARRGAAPRLVALAPSSPAVPVPTCSLPAKGLGLYV 641
Query: 441 IYLPYSDDIRPVEELHS-DTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+ LPYS+DIR V L ++ +P S ++V AA ++ + + + + NPSLQ Y
Sbjct: 642 VPLPYSEDIRDVPSLPCFNSATIP--SQEDVDLAAGIVSCLSVS-YDINAVPNPSLQLRY 698
Query: 500 AVLQALALEEDD-----MPE--------IKDETVPDEEGMARPGVVKAVEEFKLSVYGDN 546
L+ +AL + MPE + D ++PD EGMA+ + +F + G +
Sbjct: 699 QALKEMALRQATESGVMMPEKSGNKPGTMADMSLPDSEGMAQYAPI--FHDFNAKLLGPS 756
Query: 547 YD---------------EEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMT 591
YD E+ S R+ +NAA + ++ L +T
Sbjct: 757 YDAARLCPQPKRSEFAGEKSLRTGSGGHREGDDVVDNAAIHLVETAF----EQNALPTLT 812
Query: 592 VQELKLYLMAHNLSTTG-RKETLISRILTHM 621
V +LK YL A ST G R++ + ++ H+
Sbjct: 813 VMQLKAYLSALGESTAGARRKDEVIEVVKHV 843
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 82/177 (46%), Gaps = 26/177 (14%)
Query: 50 DQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQ 109
++ + T F AV C+ + + +++ D VA+ +NT K+ N+ +L +++ +
Sbjct: 137 NRINNTPFRDAVRCVLKLCQDKVLMSDKDLVALALYNTNKRHNIYELPGLYIVH-----P 191
Query: 110 LDRPTARFIKEFDHIE----------ESFEKEIGSQYGIVSGSRENSLYNALWVAQGL-L 158
+ + ++E + + E F+K IG + E L + LW AQ + L
Sbjct: 192 FSLLSVQSVRELEGLAASGDVSSMMYEEFKKNIGH-----AQRNEVHLSDVLWAAQHMFL 246
Query: 159 RKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS 215
S+ +R+ +FTN+D+P KG + + R ++ + G++IE+ +
Sbjct: 247 SLHSNLIKYRRVFIFTNDDEPH---KG--ETSEKERCLARVRELYEAGVTIEVFAIG 298
>gi|407850168|gb|EKG04670.1| KU70 protein, putative [Trypanosoma cruzi]
Length = 852
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 52/331 (15%)
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPSDKEVV- 385
G + F+ QE I +T + GF L + L+ H + S+F+ P+ +
Sbjct: 523 GRRLFFTAQERQHIFLTATAGAPV-GFSILCFKHKEDILQHKHVICKSSFLRPNPYDGGE 581
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGGQVEPP---GMHM 440
S +F+ L R+++R N+ AVA Y + PRLVAL V P G+++
Sbjct: 582 ASLRLFVQLTRTLVRGNKVAVAQYVARRGAAPRLVALAPSSPAVPVPTCSLPAKGLGLYV 641
Query: 441 IYLPYSDDIRPVEELHSDTDA-VPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY 499
+ LPYS+DIR V L A +P S ++V AA ++ + + + + NPSLQ Y
Sbjct: 642 VPLPYSEDIRDVPSLPCFNPATIP--SQEDVDLAAGIVSCLSVS-YDINAVPNPSLQLRY 698
Query: 500 AVLQALALEEDD-----MPE--------IKDETVPDEEGMARPGVVKAVEEFKLSVYGDN 546
L+ +AL + MPE + D ++PD EGMA+ + +F + G +
Sbjct: 699 QALKEMALRQATESGVMMPEKSGNKPGTMVDMSLPDSEGMAQYAPI--FHDFNAKLLGPS 756
Query: 547 YD---------------EEGDVKVSEASRKRKAATENAAKECANYDWADLADKGKLKEMT 591
YD E+ S R+ +NAA + ++ L +T
Sbjct: 757 YDAARLCPQPKRSEFAGEKSLRTGSGGHREGDDVVDNAAIHLVETAF----EQNALPTLT 812
Query: 592 VQELKLYLMAHNLSTTG-RKETLISRILTHM 621
V +LK YL A ST G R++ + ++TH+
Sbjct: 813 VMQLKAYLSALGESTAGARRKDEVIEVVTHV 843
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 50 DQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVF------- 102
++ + T F AV C+ + + +++ D VA+ +NT K+ N+ +L +++
Sbjct: 137 NRINNTPFRDAVRCVLKLCQDKVLTSDKDLVALALYNTNKRHNIYELPGLYIVYPFSLLS 196
Query: 103 --NVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGL-LR 159
+V E E L A + E F+K IG + E L + LW AQ + L
Sbjct: 197 VQSVRELEGL----AASGDVSSMMYEEFKKNIGH-----TQRNEVHLSDVLWAAQHMFLS 247
Query: 160 KGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS 215
S+ +R+ +FTN+D+P KG + + R ++ + G++IE+ +
Sbjct: 248 LHSNLIKYRRVFIFTNDDEPH---KG--ETSEKERCLARVRELYEAGVTIEVFAIG 298
>gi|47678515|emb|CAG30378.1| G22P1 [Homo sapiens]
gi|109451318|emb|CAK54520.1| XRCC6 [synthetic construct]
gi|109451896|emb|CAK54819.1| XRCC6 [synthetic construct]
Length = 227
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 415 PRLVALVAQDE-IVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKA 473
P VALV Q+E + QV PPG +++LP++DD R + T+ + A+ ++V K
Sbjct: 26 PYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKM----PFTEKI-MATPEQVGKM 80
Query: 474 AALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVK 533
A+++++ + F NP LQ+H+ L+ALAL+ + + D T+P E M + +
Sbjct: 81 KAIVEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNK-RLGS 138
Query: 534 AVEEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANYDWADLADKGKLKE 589
V+EFK VY +Y+ EG V +E S ++ E + +E + KG L +
Sbjct: 139 LVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH-----ISKGTLGK 193
Query: 590 MTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
TV LK A+ L + +K+ L+ + H
Sbjct: 194 FTVPMLKEACRAYGLKSGLKKQELLEALTKHF 225
>gi|112362567|emb|CAL36028.1| HDF1 protein [Saccharomyces bayanus]
gi|112362571|emb|CAL36026.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 39/373 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + + K+I LFT+ D P S + + R T+ D D ++ + +
Sbjct: 159 GQKQLSSKKIFLFTDNDKPQESQDADERARLRRLTI----DLFDNKVNFATFFIGYGNNS 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISF---- 271
F + FY+D++ L +G DL K D K ++ ++ K+ VKRI+F
Sbjct: 215 FD-NEFYSDILQLGSHKNKGVDLDSEFDGPNTKPIDAK-YIKSKILRKKEVKRIAFQCPL 272
Query: 272 ---------IIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ 322
I G ++ + A +R + + ++R F+ TGA +
Sbjct: 273 IFDEDTNFIIGVKGYTMHSHEKAGVR----YKLVYEHEDIRQEAYSKRKFLNPTTGADVT 328
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFK-PLSYLKDYHNLRPSTFVF 378
+ PY +I S ++ I T G LR+ GF+ P S + ++N+ STF+
Sbjct: 329 GSTVKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV 388
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGM 438
P + + GS +L +++ + ++ A+ + SN V + + G
Sbjct: 389 PDEAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHS-DTDAVPRASDDEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D+ D +K+ + ++M +L+D ++ F NPSL
Sbjct: 445 YLYRIPFLDEIRKFPSLLSYDSGEKHEVDYDNMKRISQSIMGYFNLRDGYNPSDFKNPSL 504
Query: 496 QRHYAVLQALALE 508
QRH+ VL L+
Sbjct: 505 QRHFKVLHDYLLQ 517
>gi|112362565|emb|CAL36029.1| HDF1 protein [Saccharomyces bayanus]
Length = 602
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 39/373 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + + K+I LFT+ D P S + + R T+ D D ++ + +
Sbjct: 159 GQKQLSSKKIFLFTDNDKPQESQDADERARLRRLTI----DLFDNKVNFATFFIGYGNNS 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISF---- 271
F + FY+D++ L +G DL K D K ++ ++ K+ VKRI+F
Sbjct: 215 FD-NEFYSDILQLGSHKNKGVDLDSEFDGPNTKPIDAK-YIKSKILRKKEVKRIAFQCPL 272
Query: 272 ---------IIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ 322
I G ++ + A +R + + ++R F+ TGA +
Sbjct: 273 IFDEDTNFIIGVKGYTMHSHEKAGVR----YKLVYEHEDIRQEAYSKRKFLNPTTGADVT 328
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFK-PLSYLKDYHNLRPSTFVF 378
+ PY +I S ++ I T G LR+ GF+ P S + ++N+ STF+
Sbjct: 329 GSTVKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV 388
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGM 438
P + + GS +L +++ + ++ A+ + SN V + + G
Sbjct: 389 PDEAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHS-DTDAVPRASDDEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D+ D +K+ + ++M +L+D ++ F NPSL
Sbjct: 445 YLYRIPFLDEIRKFPSLLSYDSGEKHELEYDNMKRISQSIMGYFNLRDGYNPSDFKNPSL 504
Query: 496 QRHYAVLQALALE 508
QRH+ VL L+
Sbjct: 505 QRHFKVLHDYLLQ 517
>gi|112362569|emb|CAL36027.1| HDF1 protein [Saccharomyces bayanus]
Length = 581
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 39/373 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + + K+I LFT+ D P S + + R T+ D D ++ + +
Sbjct: 159 GQKQLSSKKIFLFTDNDKPQESQDADERARLRRLTI----DLFDNKVNFATFFIGYGNNS 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISF---- 271
F + FY+D++ L +G DL K D K ++ ++ K+ VKRI+F
Sbjct: 215 FD-NEFYSDILQLGSHKNKGVDLDSEFDGPNTKPIDAK-YIKSKILRKKEVKRIAFQCPL 272
Query: 272 ---------IIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ 322
I G ++ + A +R + + ++R F+ TGA +
Sbjct: 273 IFDEDTNFIIGVKGYTMHSHEKAGVR----YKLVYEHEDIRQEAYSKRKFLNPTTGADVT 328
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFK-PLSYLKDYHNLRPSTFVF 378
+ PY +I S ++ I T G LR+ GF+ P S + ++N+ STF+
Sbjct: 329 GSTVKVYPYGDLDINLSEKQNQVIMEAYTQKDGFLRIIGFRSPTSSIHYFNNIEKSTFIV 388
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGM 438
P + + GS +L +++ + ++ A+ + SN V + + G
Sbjct: 389 PDEAKYEGSIRTLASLLKTLRKKDKVAIVWGKLKSNSHPSLFVLSPSSIEEYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHS-DTDAVPRASDDEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D+ D +K+ + ++M +L+D ++ F NPSL
Sbjct: 445 YLYRIPFLDEIRKFPSLLSYDSGEKHELDYDNMKRISQSIMGYFNLRDGYNPSDFKNPSL 504
Query: 496 QRHYAVLQALALE 508
QRH+ VL L+
Sbjct: 505 QRHFKVLHDYLLQ 517
>gi|429892746|gb|AGA18918.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892770|gb|AGA18930.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 181/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+V + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLVEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|113913535|gb|ABI48911.1| YKU70 [Saccharomyces pastorianus]
Length = 601
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 167/394 (42%), Gaps = 36/394 (9%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + + K+I LFT+ D P S + + R T+ D D ++ + D
Sbjct: 159 GQKQLSSKKIFLFTDNDKPQESQDADERARLRRLTI----DLFDNMVNFVTFFIGYGDNS 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISF---- 271
F + FY+D++ L +G DL K D K ++ ++ K+ VKRI+F
Sbjct: 215 FD-NEFYSDILQLGAHKNKGMDLDSEFDGPNTKPLDAK-YIKSKILRKKEVKRIAFQCPL 272
Query: 272 -IIANGLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKR 327
+ I + Y + G + + ++R F+ TGA + +
Sbjct: 273 IFDEDAFIIGVKGYTMHSHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPMTGADVTGNTVK 332
Query: 328 FQPYKGENIKFSVQELSEIKRVST---GHLRLHGFK-PLSYLKDYHNLRPSTFVFPSDKE 383
PY +IK S ++ I T LR+ GF+ P + ++N+ STF+ P + +
Sbjct: 333 VYPYGDLDIKLSEKQNQVIMEAYTQKDAFLRIIGFRSPDRSIHYFNNIEKSTFIVPDEAK 392
Query: 384 VVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYL 443
GS +L +++ + ++ A+ + SN V V + G ++ +
Sbjct: 393 YEGSIRTLTSLFKTLRKKDKIALLWGKLKSNSHPSLFVLSPSSVEEYNE----GFYLYRI 448
Query: 444 PYSDDIRPVEELHS-DTDAVPRASDDEVKK-AAALMKRIDLKD-FSVCQFANPSLQRHYA 500
P+ D+IR L S D+ + D +K+ ++M +L+D ++ F NPSLQRH+
Sbjct: 449 PFLDEIRKFPSLLSYDSGEKHKLDYDNMKRITQSIMGYFNLRDGYNPSDFKNPSLQRHFK 508
Query: 501 VLQALAL------EEDDMPEIKDETVPDEEGMAR 528
VL L EE++ E K V E+ R
Sbjct: 509 VLHDYLLQIEINTEENETSEAKINRVIHEDDSLR 542
>gi|367009714|ref|XP_003679358.1| hypothetical protein TDEL_0B00180 [Torulaspora delbrueckii]
gi|359747016|emb|CCE90147.1| hypothetical protein TDEL_0B00180 [Torulaspora delbrueckii]
Length = 582
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 156/369 (42%), Gaps = 30/369 (8%)
Query: 167 DKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHF 226
+K+I FT+ D P A+ D D D I+ + P F F
Sbjct: 155 NKKIFYFTDNDSP----PEASDIDAKSRLRHLVNDLDDRFINFTTFFIGKPGLPFD-EGF 209
Query: 227 YADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA------NGLSIE 280
Y+D++ L A ++ R+ K+ +KRI F + +
Sbjct: 210 YSDILRLGATTKASDEFDGPNTTPISAAYIKSRVLRKQEIKRIMFQCPLILEEKSKFIVG 269
Query: 281 LNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKGENIK 337
+ Y +I PG + + + + R ++ A TG +++ + PY +I+
Sbjct: 270 VKGYTIISHEKPGVRYKLVYENEDIRQEAFSRRKYLNAKTGEEIKDGLTKVYPYGDLDIE 329
Query: 338 FSVQELSEIKRVSTGH---LRLHGFKPL-SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
S +++EI+ G L++ GF+ + L Y+N+ +TFV P + GS +
Sbjct: 330 LSESDIAEIRNDYAGEESFLKVIGFQSTETCLHYYNNIEKATFVVPDEGRYEGSIRTLSS 389
Query: 394 LHRSMLRLNRFAVAF--YGNPSNPRLVALVAQDEIVRAGGQVEP-PGMHMIYLPYSDDIR 450
L +++ + N+ A+ + + SNP + V DE P G ++ +P+ D++R
Sbjct: 390 LFKNLRQKNKVAIVWGKLKSNSNPAIFFFVPSDE-------ASPNEGFYLYRVPFLDELR 442
Query: 451 PVEELHSDTDAVPRASDDEVKKAAA-LMKRIDLKD-FSVCQFANPSLQRHYAVLQALALE 508
+ + + + +K+A L+ +LK+ F +F NP LQ+H+ +L L+
Sbjct: 443 RIPPMLISHGEIQDDDYENLKEATKKLINHFNLKNGFEPSEFKNPGLQKHFKILHDYLLQ 502
Query: 509 EDDMPEIKD 517
++ PE D
Sbjct: 503 IEEEPEKDD 511
>gi|195329860|ref|XP_002031628.1| GM23941 [Drosophila sechellia]
gi|194120571|gb|EDW42614.1| GM23941 [Drosophila sechellia]
Length = 630
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 183/423 (43%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + G YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFGDVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G +
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGEK 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + + S PR VALV +++ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + ++ + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DMQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892758|gb|AGA18924.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892768|gb|AGA18929.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 181/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+V + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLVEPDGCGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892720|gb|AGA18905.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892734|gb|AGA18912.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 181/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+V + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLVEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L A+
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAV 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892744|gb|AGA18917.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892736|gb|AGA18913.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892740|gb|AGA18915.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892762|gb|AGA18926.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGES 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|429892716|gb|AGA18903.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892718|gb|AGA18904.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892722|gb|AGA18906.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892724|gb|AGA18907.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892726|gb|AGA18908.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892728|gb|AGA18909.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892730|gb|AGA18910.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892732|gb|AGA18911.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892738|gb|AGA18914.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892742|gb|AGA18916.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892748|gb|AGA18919.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892750|gb|AGA18920.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892752|gb|AGA18921.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892756|gb|AGA18923.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892760|gb|AGA18925.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892764|gb|AGA18927.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|450857|gb|AAA20644.1| yolk protein factor 1 beta subunit [Drosophila melanogaster]
Length = 631
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILPDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|17945631|gb|AAL48866.1| RE28533p [Drosophila melanogaster]
Length = 535
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 13 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 69
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 70 KIAYVTDVREPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 121
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 122 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 181
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 182 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 240
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 241 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 300
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 301 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 358
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 359 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 416
Query: 506 ALE 508
+L+
Sbjct: 417 SLD 419
>gi|17985997|ref|NP_536773.1| inverted repeat-binding protein, isoform A [Drosophila
melanogaster]
gi|226694180|sp|Q23976.3|KU70_DROME RecName: Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit dp70;
AltName: Full=ATP-dependent helicase Irbp; AltName:
Full=Inverted repeat-binding protein; AltName: Full=Yolk
protein factor 1 subunit beta
gi|7299442|gb|AAF54631.1| inverted repeat-binding protein, isoform A [Drosophila
melanogaster]
gi|201065471|gb|ACH92145.1| FI01513p [Drosophila melanogaster]
gi|429892754|gb|AGA18922.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|429892766|gb|AGA18928.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVREPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|557036|gb|AAC46492.1| IRBP [Drosophila melanogaster]
gi|429892712|gb|AGA18901.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|1093398|prf||2103334A inverted repeat-binding protein
Length = 631
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVREPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|254570873|ref|XP_002492546.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|238032344|emb|CAY70367.1| Subunit of the telomeric Ku complex (Yku70p-Yku80p) [Komagataella
pastoris GS115]
gi|328353442|emb|CCA39840.1| Protein Ku70 [Komagataella pastoris CBS 7435]
Length = 620
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 164/366 (44%), Gaps = 48/366 (13%)
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA-KDAQDLGIS-IELLPLSPPDEEFKVSH 225
K+I LFTN D P+ N R +++ D D+ I+ I L P +F +
Sbjct: 144 KKIFLFTNNDKPYNG------NSQLRVPLKKTLADYNDVDITLIPFLLNKPSGVKFDKTE 197
Query: 226 FYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI----IANGLSIEL 281
Y++++ + D ++ + +++R+R+ + +KR+ F IAN L I +
Sbjct: 198 -YSEILFYDKDACSMSI-----------EEIRQRISRHKEIKRVYFTCPLKIANNLCISV 245
Query: 282 NTYALIRPTVPGAITWL--DSVTNHPLKTERSFICADTGALMQEP---------AKRFQP 330
Y++ P I ++ + T ++T+ F+ +G A + P
Sbjct: 246 KGYSMFYHETPRKIKFVVNEGSTFKDVETKSQFVDPTSGKEFSSEQLIKAYPLGADAYIP 305
Query: 331 YKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSD-KEVVGSTC 389
E +K ++ ++I ++ L + GF+ +S + ++F+ P++ + S
Sbjct: 306 LNSEQVK-TINRFNDI--INIPSLEILGFRDISNWLPQYQFGKASFLSPNNYGDFTHSQR 362
Query: 390 IFIALHRSMLRLNRFAVAF--YGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSD 447
F L +SM + ++FAV F N + PRL ++ + P G +I LPY D
Sbjct: 363 TFSCLLQSMTKKSKFAVLFGTLKNNAAPRLFGMIPSTLPQYESCNL-PQGFFLIKLPYLD 421
Query: 448 DIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQ--A 504
D+R + + DA D V + L+ +I +K+ + ++ NPSLQ H+ +L+
Sbjct: 422 DVRQLPPKIAPVDA---DLDVLVSLFSNLVGKIHIKNGYQPQEYENPSLQWHFKMLRDDY 478
Query: 505 LALEED 510
L LE D
Sbjct: 479 LQLEHD 484
>gi|429892714|gb|AGA18902.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 631
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 180/423 (42%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVLYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + +L + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DLQDWNNTENTADEQKVEFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|380028952|ref|XP_003698147.1| PREDICTED: X-ray repair cross-complementing protein 6-like [Apis
florea]
Length = 540
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 107/548 (19%), Positives = 223/548 (40%), Gaps = 71/548 (12%)
Query: 12 DDEESDNEFYQEHE----ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQS 67
++E+ +NE Y++ ++ +++L+DA+P MF + Q +F + +
Sbjct: 5 NEEDLENEDYEDDSKDLYGVRDGILFLIDATPPMFKN----DPQNGIPYFLQCIKQYKEI 60
Query: 68 LKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEES 127
LK +++ D + + F T K + + N+ ++L+ + +K+ I+E
Sbjct: 61 LKQKLVWNRQDWMGLILFGTEKCDSDSETK-----NILTLKKLNLISKDDLKDIMKIDEG 115
Query: 128 FEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAA 187
+ Y + S LY+ LW A KR++LFT +D+P
Sbjct: 116 ---KTWEYYRDNASSISYPLYDVLWHAARAFSAIHITMPMKRVILFTCQDNP-----PII 167
Query: 188 KNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQ 247
N+ A + + + ++ L E + + FY D+ L G + +
Sbjct: 168 DNNEKHRIRVEATSYSKIDVQLSVVGLG---ENWNHNLFYKDLEMLSGK-----IEADDY 219
Query: 248 KLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLK 307
K +KD + + R + ++ + + ++I+++ L T + TN PL
Sbjct: 220 KRTSLKDLVEQVKLPSRNMAKLPWRLGENVTIDVSLRNLSVKTQYLHKENISKQTNIPLT 279
Query: 308 TERSFICADTGALMQEP-----------------AKRFQPYKGENIKFSVQELSEIKRVS 350
T R++ D +M E +++Q + ENI F+ E+ +
Sbjct: 280 T-RTYFKVDKDDMMTEEIDDIENKRTSSPVLEMDIQKYQNFGLENIYFTQAEVRSLSTTR 338
Query: 351 TGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL-----HRSMLRLNRFA 405
+ L K +SY YH P FV PS + +F AL + ++ +
Sbjct: 339 EPGIDLICMKRISYHLLYHVETP-YFVIPSKSNRKDNKLLFGALLNKCDSKKLMIICAVT 397
Query: 406 VAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSD-----TD 460
+ Y S L ++ + G ++ +P+ +++R + E SD +
Sbjct: 398 IRSYSASS---LYTMIP---------NINNGGFYLYKMPFRENVRNLSEYFSDFIYNHNE 445
Query: 461 AVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETV 520
P + V+ +MK++++ +++ F+NP LQ +++ LAL+ + + D+T+
Sbjct: 446 RKPPIEPNGVELLKNIMKKLNI-EYNPKLFSNPKLQVQLQIVETLALDLEQFKSLSDDTL 504
Query: 521 PDEEGMAR 528
P E + +
Sbjct: 505 PKTEEIHK 512
>gi|195571761|ref|XP_002103871.1| GD18751 [Drosophila simulans]
gi|194199798|gb|EDX13374.1| GD18751 [Drosophila simulans]
Length = 631
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 182/423 (43%), Gaps = 39/423 (9%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G +
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGEK 336
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 337 DLRISMDQLNRVRNLHKPQMMLLGFKHGSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 396
Query: 395 HRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + + S PR VALV +++ R+ + G ++YLP
Sbjct: 397 WERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS--LLCGDGFKIVYLPE 454
Query: 446 SDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQAL 505
+ IR + ++ + A + +V+ ++K++ + D+ +PSL A L AL
Sbjct: 455 AKHIRHL-DMQDWNNTENTADEQKVQFFQKIIKKLRV-DYQPNLINDPSLDALQANLLAL 512
Query: 506 ALE 508
+L+
Sbjct: 513 SLD 515
>gi|401413136|ref|XP_003886015.1| putative ATP-dependent DNA helicase II, 70 kDa subunit [Neospora
caninum Liverpool]
gi|325120435|emb|CBZ55989.1| putative ATP-dependent DNA helicase II, 70 kDa subunit [Neospora
caninum Liverpool]
Length = 842
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 98/182 (53%), Gaps = 25/182 (13%)
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQ-DEIVRAGGQVEPPGMH 439
++E + S + R ++ + R V +G+P LVAL+ Q +E+ AG ++ PG+H
Sbjct: 533 EQEKLFSAFVMTLCKRELVAIARL-VPKHGSPVA--LVALLPQLEEVDEAGNTLQAPGLH 589
Query: 440 MIYLPYSDDIRPVEELHSD----------TDAVPRASDD-----EVKKAAALMKRIDLKD 484
++ LP+++DIR ++ + DA RA+ +++ A ++ + ++D
Sbjct: 590 LLRLPFAEDIREIDLPWTSLVGFQRPGERGDARERAASKRECEMQIQAAVRVLSALGVED 649
Query: 485 FSVCQFANPSLQRHYAVLQALAL--EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSV 542
F Q +N +LQRH+A+++ALAL E D+P VPD + + G+ + E+K SV
Sbjct: 650 FHPHQLSNDALQRHFAIIEALALGNSEADLP--PPTLVPDSAILEKAGI--KIREWKESV 705
Query: 543 YG 544
YG
Sbjct: 706 YG 707
>gi|195500041|ref|XP_002097204.1| GE26092 [Drosophila yakuba]
gi|194183305|gb|EDW96916.1| GE26092 [Drosophila yakuba]
Length = 631
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 176/433 (40%), Gaps = 59/433 (13%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 109 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGCGRFDLMIRLCIEMLEKCGKKLNNA 165
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 166 KIAYLTDVSTPHPS-----SSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 217
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 218 EFITLSRAIELDAFQVPDAQMLREILADRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 277
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQ----------PYK 332
R P + L N ++T+R D G+ Q+ +Q
Sbjct: 278 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGS--QDIEHEYQIKVTDGWYTCSVG 334
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
G++++ S + ++ ++ + + L GFK S + + +PS F++P D+ ++GS +F
Sbjct: 335 GKDLRISTELMNRVRNLHKPQMMLLGFKHRSSMPEVSYSKPSNFMYPDDQSIIGSKRLFR 394
Query: 393 ALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEIVRAGGQVEPP-------------- 436
AL L ++ A+ + S PR VALV VE P
Sbjct: 395 ALWERCLTRDKIAICLFMCKRKSMPRYVALVP----------VEAPDNGEEKSYRSLLCG 444
Query: 437 -GMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSL 495
G ++YLP + IR + ++ + A D +V+ ++K++ + D+ +PSL
Sbjct: 445 DGFKIVYLPEAKHIRHI-DMQDWNNTENTAEDKKVEFFKKVIKKLRV-DYQPNLINDPSL 502
Query: 496 QRHYAVLQALALE 508
A L AL+L+
Sbjct: 503 DALQANLLALSLD 515
>gi|209945136|gb|ACI96799.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 153/365 (41%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+V + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLVEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|340509175|gb|EGR34734.1| hypothetical protein IMG5_003060 [Ichthyophthirius multifiliis]
Length = 360
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 386 GSTCIFIALHRSMLRLNRFAVA--FYGNPSNPRLVALVAQDEIVRAGGQVE-PPGMHMIY 442
GST +F AL + M + AV S R L+ Q+E + PPG H+I+
Sbjct: 125 GSTQMFDALIKQMNIQKQIAVTKIIVRKGSQLRFAVLLPQEEEYNYNDHTQTPPGFHLIF 184
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVL 502
LPY D+I + L + S + +K L+ +++KDF + F +P LQ+ Y+ L
Sbjct: 185 LPYGDEINKIPTLKQRKKNL--VSIEMLKVTQLLINGLEIKDFDLRNFEDPQLQKFYSHL 242
Query: 503 QALALEEDDMPEIKDETVPDEEGM 526
QA ALEE + +I D PD + +
Sbjct: 243 QAHALEEAEPEQIDDLLQPDSQKL 266
>gi|209945120|gb|ACI96791.1| inverted repeat-binding protein [Drosophila simulans]
Length = 436
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 155/365 (42%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + G YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFGDVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G +
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGEK 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + + S PR VALV +++ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|367004479|ref|XP_003686972.1| hypothetical protein TPHA_0I00310 [Tetrapisispora phaffii CBS 4417]
gi|357525275|emb|CCE64538.1| hypothetical protein TPHA_0I00310 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 141/650 (21%), Positives = 273/650 (42%), Gaps = 118/650 (18%)
Query: 6 DDVFRDDDE--------ESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHF 57
D+++ D+DE ++ Y+++E+ + Y+ + ++ S MFS + + ++
Sbjct: 12 DEIYDDEDEFYIDYSSIDNPKASYRKYESHEGYM-FCIELSEHMFS-------EISQLNY 63
Query: 58 HIAVSCIAQSL----KTQIINRLYDEVAICFFNT---RKKKNLQDLNAVFVFNVAEREQL 110
+ + + +SL +I R V FFN KK + + + NV++ ++L
Sbjct: 64 KVQLIEVLESLMELMSQLVITRPSTGVGCFFFNCDNKESKKRIYEFLPLRDINVSDMKKL 123
Query: 111 ---------DRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRK- 160
+R + R +FD I + + NSL + + Q
Sbjct: 124 HDLLDDVKEERLSIRDAFKFDEIND----------------KGNSLESLFLLIQDRFSNN 167
Query: 161 --GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA--KDAQDLGISIELLPLSP 216
G +K++ LFT+ D P ND +T R D D I ++
Sbjct: 168 IPGQKIYTNKKVFLFTDNDKP------KESNDKEKTIRLRRLFDDISDNYIQFVTFFINK 221
Query: 217 PD--EEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISF--- 271
D + F S FY+D++ L + F + + + ++ ++ K+ +KRI F
Sbjct: 222 IDSSDNFDDS-FYSDILKLRNSNSIEFDGPSTKPISVA--YIKNKVLRKKEIKRIMFQCP 278
Query: 272 IIANG---LSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALM--QE 323
+I N + + Y +I PG+ + + ++R + TG ++ +
Sbjct: 279 LILNADSDFQVNVKGYTIISHEKPGSRYKLVYEHENIRREAFSKRKLLNGKTGTVVTKDD 338
Query: 324 PAKRFQPYKGENIKFSVQEL-SEIKRVSTG------HLRLHGFK-PLSYLKDYHNLRPST 375
K FQ FS+ +E ++ + L+L GF+ P + L ++N+ +
Sbjct: 339 TEKIFQLGN-----FSINSFENEFEKGNDNPLPQEPFLKLIGFRSPENSLHLFNNIGKAL 393
Query: 376 FVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAF--YGNPSNPRLVALVAQDEIVRAGGQV 433
F+ P + VGS +++R+M NR A+ + + SNP + L D Q
Sbjct: 394 FIVPDESRCVGSIRTLSSMYRTMRTKNRNAIVWGKLKSNSNPNIWILSPSDP---TKDQN 450
Query: 434 EPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAAA--LMKRIDLKD-FSVC 488
E G ++ +P+ D+IR P + H +D + R D E K ++ +L + +S
Sbjct: 451 E--GFYLYKVPFLDEIRKIPSQYTHFPSDELIRNKDYENLKRVTRNILGYFNLTNGYSPL 508
Query: 489 QFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYD 548
+F NP LQ++Y +L L+ ETVP+ E M++ E+ K + ++
Sbjct: 509 EFKNPLLQKYYKLLHDYLLQV--------ETVPETE-MSK-------EQLKQKILEEDDT 552
Query: 549 EEGDVKVSEASRKRKAATENAAKE-CANYD-WADLADKGKLKEMTVQELK 596
+ + K ++TE+ + AN++ W D+ K + E+ V+E+K
Sbjct: 553 IRKTFSIRDKIIKSASSTESHKQRLSANFNIWNDIYSKLEGNEIAVKEMK 602
>gi|209945150|gb|ACI96806.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 151/365 (41%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+V + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLVEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGLEGDDL--ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L A +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIXXDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945142|gb|ACI96802.1| inverted repeat-binding protein [Drosophila melanogaster]
gi|209945152|gb|ACI96807.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFIC---ADTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945138|gb|ACI96800.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGES 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|194902062|ref|XP_001980570.1| GG18111 [Drosophila erecta]
gi|190652273|gb|EDV49528.1| GG18111 [Drosophila erecta]
Length = 631
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 27/337 (8%)
Query: 193 RTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGL-EGDDLALF-MPSAGQKLE 250
+ +Q+A D + ++P+ ++F FY + I L +L F +P A E
Sbjct: 185 QAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYKEFITLSRAIELDAFQVPDAQMLRE 241
Query: 251 DMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTE 309
+ D+ K+ F +R + SF + LS+ + Y R P + L N ++T+
Sbjct: 242 ILADRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRR-DNSVVRTK 300
Query: 310 RSFICA---DTGALMQEPAKRFQPYKG--------ENIKFSVQELSEIKRVSTGHLRLHG 358
R D G+ E + + G +N++ S L+ ++ + + L G
Sbjct: 301 RVITVQKQKDDGSQDIEHEYQIKVTGGWYSCNVGEKNLRISTDLLNRVRNLHKPQMMLLG 360
Query: 359 FKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPR 416
FK S L + +PS F++P D+ ++GS +F AL L ++ + + S PR
Sbjct: 361 FKHRSSLPEVSYSKPSNFMYPDDQSIIGSKRLFRALWERCLARDKIVICLFMCKRKSIPR 420
Query: 417 LVALVA-----QDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVK 471
VALV ++E + G ++YLP + IR + ++ + A+D +V+
Sbjct: 421 YVALVPVEAPDKEEEKSYRSLLCGDGFKIVYLPEAKHIRHI-DMQDWNNTENTANDKKVE 479
Query: 472 KAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALE 508
++K++ + D+ +PSL A L AL+L+
Sbjct: 480 FFQKIIKKLRV-DYQPNLINDPSLDALQANLLALSLD 515
>gi|339241007|ref|XP_003376429.1| putative HEAT repeat-containing domain protein [Trichinella spiralis]
gi|316974856|gb|EFV58326.1| putative HEAT repeat-containing domain protein [Trichinella spiralis]
Length = 1343
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 56/229 (24%)
Query: 298 LDSVTNHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
LD TN +K + +TG L + ++Q Y I + +EL E+ ++ L L
Sbjct: 1156 LDGRTNGEVKLISNLFDPETGEKLHRFNLVKYQEYGRRRIAMTEKELEEMSSFTSPGLVL 1215
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSD----KEVVGSTCIFIALHRSMLRLNRFAVAFYGNP 412
GF+PL+ LK YH+LRP+ F+ P++ +E ST + RF
Sbjct: 1216 LGFQPLNRLKVYHHLRPAFFISPNENIESEEAAQST-----------KCRRF-------- 1256
Query: 413 SNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDE--V 470
H IYLPY DD+R +L + + P+ D V
Sbjct: 1257 --------------------------HGIYLPYEDDLR---DLQAVIASAPKIQVDNQLV 1287
Query: 471 KKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
++KR+ ++ ++V NP LQ+HY L+A+ L+ + + D+T
Sbjct: 1288 DLWKKVIKRMQIQ-YTVGTIQNPVLQKHYRTLEAVVLDREKIGHFVDQT 1335
>gi|209945132|gb|ACI96797.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYVTDVREPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFIC---ADTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945116|gb|ACI96789.1| inverted repeat-binding protein [Drosophila simulans]
gi|209945122|gb|ACI96792.1| inverted repeat-binding protein [Drosophila simulans]
Length = 436
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 154/365 (42%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G +
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGEK 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + + S PR VALV +++ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945124|gb|ACI96793.1| inverted repeat-binding protein [Drosophila simulans]
Length = 436
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 154/365 (42%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G +
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGEK 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHGSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + + S PR VALV +++ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945126|gb|ACI96794.1| inverted repeat-binding protein [Drosophila simulans]
Length = 436
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 154/365 (42%), Gaps = 37/365 (10%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEILEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G +
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGEK 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + + S PR VALV +++ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945118|gb|ACI96790.1| inverted repeat-binding protein [Drosophila simulans]
Length = 436
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 160/379 (42%), Gaps = 38/379 (10%)
Query: 97 NAVFVFNVAEREQLDRPTARFIKEFDHIEESFEKEIGSQYGIVS--GSRENSLYNALWVA 154
N V N A L + T ++ + E + YG+ G L L +
Sbjct: 70 NIVMPDNCAVFLPLRQLTKTIVEHYLEFMGGVETQFADVYGLAEPDGRGRFDLMTRLCIE 129
Query: 155 QGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPL 214
+L K K + +I T+ +P S ++ + +Q+A D + ++P+
Sbjct: 130 --MLEKCGKKLNNAKIAYLTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPM 182
Query: 215 SPPDEEFKVSHFYADMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFI 272
++F FY + I L +L F +P A E + D+ K+ F +R + SF
Sbjct: 183 V---DDFDYEPFYKEFITLSRAIELDSFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFY 239
Query: 273 IANGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRF 328
+ LS+ + Y R P + L N ++T+R D G+ E +
Sbjct: 240 LGPNLSMSVQYYNYFQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQI 298
Query: 329 QPYKG--------ENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPS 380
+ G ++++ S+ +L+ ++ + + L GFK S L + ++P+ F++P
Sbjct: 299 KVTGGWYTCNVGEKDLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPD 358
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGN--PSNPRLVALV-------AQDEIVRAGG 431
D+ ++GS +F AL L ++ A+ + + S PR VALV +++ R+
Sbjct: 359 DQSIIGSKRLFRALWERCLVRDKIAICLFMSKRKSIPRYVALVPVEAPDNGEEKTYRS-- 416
Query: 432 QVEPPGMHMIYLPYSDDIR 450
+ G ++YLP + IR
Sbjct: 417 LLCGDGFKIVYLPEAKHIR 435
>gi|50305035|ref|XP_452475.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607040|sp|Q6CUB4.1|KU70_KLULA RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70
gi|49641608|emb|CAH01326.1| KLLA0C06226p [Kluyveromyces lactis]
Length = 592
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 110/543 (20%), Positives = 241/543 (44%), Gaps = 55/543 (10%)
Query: 10 RDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLK 69
RDDD+ESD++ ++ +EA + +V+ + +P M+ + D + + + L
Sbjct: 17 RDDDKESDHKKWRRYEA-HDGIVFCIQLTPTMYLSN---PDLGGKIQLLEILDSL-NDLM 71
Query: 70 TQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEESFE 129
+Q++ + C+ N +D NV E L + +K + E E
Sbjct: 72 SQLVVVMPSTAVGCYIYNCSHPNAED-------NVYELIPLRDVNYKNMKRVSDLLEDIE 124
Query: 130 KE---IGSQYGIVSGSRENSLYNALW-VAQGLLR--KGSSKTADKRILLFTNEDDPFGSI 183
++ + + I + L L V + L+ +G + +K+I FT++D P +
Sbjct: 125 QDRILLKDEIPIADPNNPIELSPVLIKVRETFLQPIEGQKQLTNKKIFFFTDDDKPAEFL 184
Query: 184 KGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI--GLEGDDLALF 241
+++ + + D D I+ + D+ F S YAD++ G + ++ +
Sbjct: 185 NVDSRSRLRKV----VDDLYDYYINFVTFFIGSEDKPFDDS-MYADILKWGSKINEAQSW 239
Query: 242 MPSAGQKLEDM-----KDQLRKRMFSKRIVKRISFIIAN--GLSIELNTYALIRPTVPGA 294
+ S G + K ++++ KRI R ++ L + +N Y ++ +PG+
Sbjct: 240 LSSHGPSTNPINASYIKSKVKRTKEIKRIKFRCPLMLDERADLVVSVNGYTIVSHEIPGS 299
Query: 295 ---ITWLDSVTNHPLKTERSFICADTG-ALMQEPAKRFQPYKGENIKFSVQELSEIKRVS 350
+ + + + R ++ A+TG A+ + + E I+ + E +I+
Sbjct: 300 KYKLVYANGSVRREAYSHREYLDAETGEAVDNSQLSKVYTFGDEIIELTEDENLKIQSGY 359
Query: 351 TGH---LRLHGFKPLSY-LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
+ H L+L GF+ L Y N+ FV P++++ GS +L+R+ML + A+
Sbjct: 360 SEHESFLKLIGFRSTEQCLHYYDNIDVPAFVVPNEEDYAGSIKTLASLYRTMLFKKKSAM 419
Query: 407 AFYG-NPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRA 465
+ P++P + ++ + + G ++ +P+ +++R + + + + A+ +
Sbjct: 420 VWGKLRPNSPPSMFVLTP-----SSKKDYNQGFYLYKVPFMEEVRKLPDFLNHS-ALIES 473
Query: 466 SDDEV--KKAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPD 522
D +V K L+ +LK+ + F NP+LQ+H+ +L+ L+ + D++ P+
Sbjct: 474 DDYKVMSKVTETLINFFNLKNGYRPSDFHNPALQKHFKILREYLLQIE-----VDKSKPE 528
Query: 523 EEG 525
+EG
Sbjct: 529 DEG 531
>gi|209945128|gb|ACI96795.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 139/317 (43%), Gaps = 34/317 (10%)
Query: 157 LLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSP 216
+L K K + +I T+ +P S ++ + +Q+A D + ++P+
Sbjct: 130 MLEKCGKKLNNAKIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV- 183
Query: 217 PDEEFKVSHFYADMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA 274
++F FY + I L +L F +P A E + D+ K+ F +R + SF +
Sbjct: 184 --DDFDYEPFYKEFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLG 241
Query: 275 NGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTERSFIC---ADTGALMQEPAKRFQP 330
LS+ + Y R P + L N ++T+R D G+ E + +
Sbjct: 242 PNLSMSVQYYNYFQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKV 300
Query: 331 YKG--------ENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
G +++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+
Sbjct: 301 TGGWYTCNVGERDLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQ 360
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQV 433
++GS +F AL L ++ A+ + S PR VALV +D+ R+ +
Sbjct: 361 SIIGSKRLFRALWERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LL 418
Query: 434 EPPGMHMIYLPYSDDIR 450
G ++YLP + IR
Sbjct: 419 CGDGFKIVYLPEAKHIR 435
>gi|209945114|gb|ACI96788.1| inverted repeat-binding protein [Drosophila yakuba]
Length = 436
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 151/367 (41%), Gaps = 41/367 (11%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGCGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYLTDVSTPHPS-----SSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDAFQVPDAQMLREILADRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQ----------PYK 332
R P + L N ++T+R D G+ Q+ +Q
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGS--QDIEHEYQIKVTDGWYTCSVG 310
Query: 333 GENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFI 392
G++++ S + ++ ++ + + L GFK S + + +PS F++P D+ ++GS +F
Sbjct: 311 GKDLRISTELMNRVRNLHKPQMMLLGFKHRSSMPEVSYSKPSNFMYPDDQSIIGSKRLFR 370
Query: 393 ALHRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYL 443
AL L ++ A+ + S PR VALV +++ R+ + G ++YL
Sbjct: 371 ALWERCLTRDKIAICLFMCKRKSMPRYVALVPVEAPDNGEEKSYRS--LLCGDGFKIVYL 428
Query: 444 PYSDDIR 450
P + IR
Sbjct: 429 PEAKHIR 435
>gi|365991283|ref|XP_003672470.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
gi|343771246|emb|CCD27227.1| hypothetical protein NDAI_0K00360 [Naumovozyma dairenensis CBS 421]
Length = 620
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 162/386 (41%), Gaps = 70/386 (18%)
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFY 227
++I LFT+ D P S + AK + R D D I+ + PD F S FY
Sbjct: 178 RKIFLFTDNDSPIESEEHEAKLRIRRL----VDDMNDNYINFTTFFIGTPDRPFDDS-FY 232
Query: 228 ADMIGLEGDDLALFMPSAGQKLEDMKDQ-------------------------LRKRMFS 262
+D++ L G K + DQ ++ R+
Sbjct: 233 SDVLKL------------GAKTRETSDQDYIDAVDDEYSEFDGPNTKPIPAKYIKSRILR 280
Query: 263 KRIVKRISF---IIANG---LSIELNTYALI---RPTVPGAITWLDSVTNHPLKTERSFI 313
K+ +KRI+F +I N I + Y L +P + + + R ++
Sbjct: 281 KKEIKRITFQSPLILNEDAEFIIGIRGYMLYSHEKPNTRYKLVYEQENVRKEAFSSRKYL 340
Query: 314 CADTGALMQ--EPAKRFQPYKGENIKFSVQELSEIKR---VSTGHLRLHGFKPLSY-LKD 367
+TG +Q E K F PY NI+ + +E+ +++ L++ GF+ + L
Sbjct: 341 NPNTGEELQNDEYVKIF-PYGDMNIELNDKEVYKVEEEISCPEAFLKIIGFRSKNQCLYY 399
Query: 368 YHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDE 425
++N+ +TFV P + + GS +L R++ + ++ A+ + +N P L L
Sbjct: 400 FNNITATTFVVPDESQYEGSIRTMASLFRTLKKKDKVAIIWGKMKTNSKPCLYLLCPTSN 459
Query: 426 IVRAGGQVEPPGMHMIYLPYSDDIRPVEEL--HSDTDAVPRASDDEVKKAAALMKRIDLK 483
R G ++ +P+ ++IR +L + D + P ++ +K + +++ L+
Sbjct: 460 SDRNEG------FYLYRMPFLEEIRKFPKLLDYKDRSSNPDYTN-LIKITSKIVEYFHLR 512
Query: 484 D-FSVCQFANPSLQRHYAVLQALALE 508
+ + +F NPSLQR Y VL L+
Sbjct: 513 NGYIPSEFENPSLQRFYRVLHDYLLQ 538
>gi|237835731|ref|XP_002367163.1| ATP-dependent DNA helicase II, 70 kDa subunit, putative [Toxoplasma
gondii ME49]
gi|211964827|gb|EEB00023.1| ATP-dependent DNA helicase II, 70 kDa subunit, putative [Toxoplasma
gondii ME49]
gi|221506162|gb|EEE31797.1| ATP-dependent DNA helicase II, 70 kDa subunit, putative [Toxoplasma
gondii VEG]
Length = 858
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 25/185 (13%)
Query: 378 FPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQ-DEIVRAGGQVEPP 436
F ++E + S + R ++ + R V+ G+P + LVAL+ Q +E+ AG V+ P
Sbjct: 536 FKDEQEKLFSAFLMTLCKRELVAVARL-VSKRGSPVS--LVALLPQLEEVDEAGNTVQAP 592
Query: 437 GMHMIYLPYSDDIRPVEELHSDT-------------DAVPRASDDEVKKAAAL--MKRID 481
G+H++ LP+++DIR ++ S D R ++E + AA+ +
Sbjct: 593 GLHLLRLPFAEDIRQIDFPWSSAAGCRGDGGPADLQDKAARKEENERRIQAAMRALSAFS 652
Query: 482 LKDFSVCQFANPSLQRHYAVLQALAL--EEDDMPEIKDETVPDEEGMARPGVVKAVEEFK 539
++DF Q N +LQRH+A+++A AL EE ++P PD + + A+ E+K
Sbjct: 653 VEDFHPHQLRNDALQRHFALVEAFALGAEEAELP--APTLAPDLDVLD--NAEDAIREWK 708
Query: 540 LSVYG 544
SVYG
Sbjct: 709 ESVYG 713
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 125 EESFEKEIGSQYGIVSGSRENSLYNALWV-----AQGLLRKGSSKTADKRILLFTNEDDP 179
EE F + G S L + WV + G R+G+ +RI+LFT+ D P
Sbjct: 176 EEDFRTQFGDSLSRAS-PECPPLADVFWVLSHALSAGTRRRGARALIQQRIILFTSNDSP 234
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS-PPDEEFKVSHFYADMIGLEGDDL 238
+ GA + T QR +D ++ G+ + L+PL P F + F+ D + L D+L
Sbjct: 235 CPT--GAPEALAAAT--QRLRDLREDGVDVCLVPLEFPGTAPFSMETFWGDALCLTDDEL 290
Query: 239 ALFMPSAGQKLEDM-------KDQLRKRM----FSKRIVKRISFIIANGLSIELNTYALI 287
G+ M K +R RM + R++ R +++ ++ L+ +
Sbjct: 291 -----REGEGSNKMTPTVSAYKSYVRLRMDELNDNVRLLDRTQRVLS---TVPLH----L 338
Query: 288 RPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKG 333
RP++ + L SV PL + + AD P + Q G
Sbjct: 339 RPSLQLPVCLLSSVRPQPLPRPHAVLTADEKQEPLRPGRAVQILPG 384
>gi|366991251|ref|XP_003675391.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
gi|342301256|emb|CCC69022.1| hypothetical protein NCAS_0C00320 [Naumovozyma castellii CBS 4309]
Length = 608
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 170/399 (42%), Gaps = 52/399 (13%)
Query: 146 SLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDL 205
+L+N L L S+K K+I LFT+ D P D T + D D
Sbjct: 140 TLFNFLLDQFTKLTADSNKYHSKKIFLFTDNDSP----HEVNDKDATLRIRRIVDDMNDN 195
Query: 206 GISIELLPLSPPDEEFKVSHFYADMIGL----EGDDLALFMPSAGQKLEDMKDQ------ 255
I+ + + FK S FY++++ L ++LA S G E+ +
Sbjct: 196 YINFVTFFIGREGKPFKNS-FYSNILKLGSKVNKENLA---QSDGTGDEEYSEYDGPNTT 251
Query: 256 ------LRKRMFSKRIVKRISFIIA------NGLSIELNTYALI---RPTVPGAITWLDS 300
++ ++ K+ +KR F N + + YA++ +P + +
Sbjct: 252 PIPASYIKSKILRKKEIKRTMFQCPLILKEENNFIVSVRGYAIVTQEKPATRYKLVYEHE 311
Query: 301 VTNHPLKTERSFICADTGALMQ--EPAKRFQPYKGENIKFSVQELSEIKRVSTGH---LR 355
+ R F+ +TG ++ E K F PY ++I+ + +E+++I + H L+
Sbjct: 312 NIRKEASSRRKFLNPNTGEEIKPDELCKVF-PYGDQDIELNDKEVAKINDDYSKHESFLK 370
Query: 356 LHGFKPL-SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAF--YGNP 412
+ GF+ + ++ ++N+ + FV P + + G+ +L R + + ++ + + +
Sbjct: 371 VIGFRSTKNSIRYFNNIDKALFVVPDESQYEGTIKTMASLFRVLKKRDKCMIVWGKVKSN 430
Query: 413 SNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASD--DEV 470
SN RL L I R G ++ +P+ D+IR +L D + + + D + V
Sbjct: 431 SNLRLYILSPTTNIDRN------EGFYLYRIPFLDEIRKFPKL-LDYNHITTSEDYLNLV 483
Query: 471 KKAAALMKRIDLKD-FSVCQFANPSLQRHYAVLQALALE 508
+ ++ +LK + F NPSLQRHY L L+
Sbjct: 484 RITENIIGYFNLKKGYRPSDFKNPSLQRHYKTLHDYLLQ 522
>gi|112362643|emb|CAL35990.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362645|emb|CAL35989.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR-AKDAQDLGISIELLPLSPPDE 219
G + ++KR+ LFT+ D P A++ R ++R A D D ++ + ++
Sbjct: 159 GQKQLSNKRVFLFTDIDKP-----QEAQDTDERARLRRLAIDLFDNKVNFATFFIGYANK 213
Query: 220 EFKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---I 272
F + FY+D++ L ++ L G + + + ++ R+ K+ VKRI F +
Sbjct: 214 PFD-NEFYSDILQLGSGINKNMGLNSEFDGPNTKPIDARYIKSRILRKKEVKRIMFQCPL 272
Query: 273 IAN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
I + I + Y + G + + ++R F+ TG + +
Sbjct: 273 IFDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPMTGEDVSDNTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFP 379
+ PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 333 KVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVP 389
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPG 437
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 390 DEAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEG 443
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPS 494
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP
Sbjct: 444 FYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNPL 503
Query: 495 LQRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
LQ+HY VL L EE++ P K + + E+ R
Sbjct: 504 LQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLR 543
>gi|112362625|emb|CAL35999.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR-AKDAQDLGISIELLPLSPPDE 219
G + ++KR+ LFT+ D P A++ R ++R A D D ++ + ++
Sbjct: 159 GQKQLSNKRVFLFTDIDKP-----QEAQDTDERARLRRLAIDLFDNKVNFATFFIGYANK 213
Query: 220 EFKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---I 272
F + FY+D++ L ++ L G + + + ++ R+ K+ VKRI F +
Sbjct: 214 PFD-NEFYSDILQLGSGINKNMGLNSEFDGPNTKPIDARYIKSRILRKKEVKRIMFQCPL 272
Query: 273 IAN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
I + I + Y + G + + ++R F+ TG + +
Sbjct: 273 IFDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPMTGEDVSDNTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFP 379
+ PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 333 KVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVP 389
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPG 437
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 390 DEAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEG 443
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPS 494
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP
Sbjct: 444 FYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNPL 503
Query: 495 LQRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
LQ+HY VL L EE++ P K + + E+ R
Sbjct: 504 LQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLR 543
>gi|112362623|emb|CAL36000.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR-AKDAQDLGISIELLPLSPPDE 219
G + ++KR+ LFT+ D P A++ R ++R A D D ++ + ++
Sbjct: 159 GQKQLSNKRVFLFTDIDKP-----QEAQDTDERARLRRLAIDLFDNKVNFATFFIGYANK 213
Query: 220 EFKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---I 272
F + FY+D++ L ++ L G + + + ++ R+ K+ VKRI F +
Sbjct: 214 PFD-NEFYSDILQLGSGINKNMGLNSEFDGPNTKPIDARYIKSRILRKKEVKRIMFQCPL 272
Query: 273 IAN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
I + I + Y + G + + ++R F+ TG + +
Sbjct: 273 IFDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPMTGEDVSDNTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFP 379
+ PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 333 KVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVP 389
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPG 437
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 390 DEAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEG 443
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPS 494
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP
Sbjct: 444 FYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNPL 503
Query: 495 LQRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
LQ+HY VL L EE++ P K + + E+ R
Sbjct: 504 LQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLR 543
>gi|112362627|emb|CAL35998.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362629|emb|CAL35997.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362631|emb|CAL35996.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362633|emb|CAL35995.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362641|emb|CAL35991.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR-AKDAQDLGISIELLPLSPPDE 219
G + ++KR+ LFT+ D P A++ R ++R A D D ++ + ++
Sbjct: 159 GQKQLSNKRVFLFTDIDKP-----QEAQDTDERARLRRLAIDLFDNKVNFATFFIGYANK 213
Query: 220 EFKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---I 272
F + FY+D++ L ++ L G + + + ++ R+ K+ VKRI F +
Sbjct: 214 PFD-NEFYSDILQLGSGINKNMGLNSEFDGPNTKPIDARYIKSRILRKKEVKRIMFQCPL 272
Query: 273 IAN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
I + I + Y + G + + ++R F+ TG + +
Sbjct: 273 IFDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPMTGEDVSDNTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFP 379
+ PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 333 KVYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVP 389
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPG 437
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 390 DEAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEG 443
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPS 494
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP
Sbjct: 444 FYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGYFNLRDGYNPSEFKNPL 503
Query: 495 LQRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
LQ+HY VL L EE++ P K + + E+ R
Sbjct: 504 LQKHYKVLHDYLLQIETTFEENEKPSAKKDRIMREDDSLR 543
>gi|112362621|emb|CAL36001.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 167/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ + + P D+E
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDTNERARLRRLTIDLFDNKVNFATFFIGYANKPFDDE 218
Query: 221 FKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---II 273
F Y+D++ L ++ L G + + + ++ R+ K+ VKRI F +I
Sbjct: 219 F-----YSDILQLGSGINKNMGLNSEFDGPNTKPIDARYIKSRILRKKEVKRIMFQCPLI 273
Query: 274 AN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKR 327
+ I + Y + G + + ++R F+ TG ++ +
Sbjct: 274 FDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPITGEDVRGNTVK 333
Query: 328 FQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFPS 380
PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 334 VYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFILSP------SSAKEYNEGF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNPLL 504
Query: 496 QRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
Q+HY VL L EE++ P K + V E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFEENEKPNAKKDRVMREDDSLR 543
>gi|254580595|ref|XP_002496283.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
gi|238939174|emb|CAR27350.1| ZYRO0C14850p [Zygosaccharomyces rouxii]
Length = 594
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 163/382 (42%), Gaps = 42/382 (10%)
Query: 160 KGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQR-AKDAQDLGISIELLPLSPPD 218
+G +K++ LFT+ D P A+++ T++ ++ D D I+ + +
Sbjct: 156 EGQKAFNNKKVFLFTDNDSP-----PEAEDNETKSRLRHLVDDMDDHFINFTTFFIGKEE 210
Query: 219 EEFKVSHFYADMIGL----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA 274
F S FY+D++ L E + P+ ++ R+ K+ VKRI F
Sbjct: 211 APFDDS-FYSDVLKLGATAEDPNTEFDGPNTTPI---SASYIKSRVLRKQEVKRIMFQCC 266
Query: 275 NGLS------IELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPA 325
L + + Y +I PG + + ++R F+ ++TG +++E
Sbjct: 267 LILEERMQFMVGIKGYTIIIQERPGQRYRLVYEKDEVRKEANSKRKFLDSNTGEVIEEGL 326
Query: 326 KRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLSYLKDY-HNLRPSTFVFPSD 381
+ PY +I + +EL+E+++ T L++ GF+ + Y +N+ + FV P +
Sbjct: 327 TKVFPYGDLDITITDEELNEVRKSYTEEESFLKIIGFRDYNKCIHYFNNIDRALFVVPDE 386
Query: 382 KEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPP--GMH 439
GS +L +++ + AV + +N V + + E P G +
Sbjct: 387 FRFEGSIRTLASLFKNLRAKGKVAVVWGKLKTNSHPAVFVL------SPSRNEDPNEGFY 440
Query: 440 MIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQR 497
+ +P+++++R P + ++ P + + + + K + +F NP LQ+
Sbjct: 441 LYRIPFAEELRRFPQSLIRHNSYDTPEYNQLKDTTKSIIDHFQFAKGYRPSEFRNPDLQK 500
Query: 498 HYAVLQALAL-----EEDDMPE 514
H+ +L L EEDD PE
Sbjct: 501 HFKILHDYLLQVEQEEEDDSPE 522
>gi|444315986|ref|XP_004178650.1| hypothetical protein TBLA_0B02890 [Tetrapisispora blattae CBS 6284]
gi|387511690|emb|CCH59131.1| hypothetical protein TBLA_0B02890 [Tetrapisispora blattae CBS 6284]
Length = 648
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 170/406 (41%), Gaps = 74/406 (18%)
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQR-AKDAQDLGISIELLPLSPPDEEFKVSHF 226
K++ LFTN D P S +N+ TR ++R D + I ++ PD +F + F
Sbjct: 168 KKVFLFTNNDKPIES-----ENNETRKKLRRMVNDLNESEIFFSTFFINKPDSQFDDT-F 221
Query: 227 YADMIGLEGDD------LALFMPSAGQK------LEDMKD-------------------- 254
Y+D++ L +D + + AG+ + D+KD
Sbjct: 222 YSDILKLPINDDTSEIDVEDYYDDAGENGNHYLLINDLKDTSKSKTTDRKINPSLRRFCR 281
Query: 255 ---------QLRKRMFSKRIVKRISFII------ANGLSIELNTYALIRPTVPGA---IT 296
+++R+ K+ ++R+ F A+ I + Y + PG +
Sbjct: 282 PNTKPIEASNIKQRILRKQEIRRVRFQCPLILDEASNFIIGITGYNIFSIEKPGTRYKLV 341
Query: 297 WLDSVTNHPLKTERSFICADTGA-LMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGH-- 353
+ + R F+ +TG L E ++ Y NI+ S + IK +
Sbjct: 342 YEHENVRKEAFSRRKFLDPNTGEELKDEDFQKVYKYGDINIELSDEATQNIKNEYMENRP 401
Query: 354 -LRLHGFKPLSY-LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN 411
++L GF+ LK Y+N+ ++FV P + GS +L R++ + + A+ + +
Sbjct: 402 FMKLLGFRSKDISLKYYNNIDKASFVVPDESSYEGSIKTMASLFRTLHKKKKVAIVWGVS 461
Query: 412 PS--NPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPR--ASD 467
S +P + L +E G+++ +P+ D+IR L S + + +
Sbjct: 462 SSGGHPTIHILSPSNE------NEHNEGLYLFQVPFLDEIRRFPALTSYSPGTNKNISEY 515
Query: 468 DEVKKAAA-LMKRIDL-KDFSVCQFANPSLQRHYAVLQALALEEDD 511
+++KK ++ +DL K + + NP+LQ++Y +L L+ +D
Sbjct: 516 EKMKKLTEYILGTLDLRKGYRPSSYRNPALQKYYKILHDYLLQIED 561
>gi|344230501|gb|EGV62386.1| hypothetical protein CANTEDRAFT_126248 [Candida tenuis ATCC 10573]
Length = 707
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFV-FPSDKEVV------GSTCIFIALHRSMLRLNRFA 405
+L+L GF+ +S K Y+N+ F+ F S S F L++S ++L R+A
Sbjct: 411 YLKLLGFRHVSKFKPYYNMAAPIFITFDSSNGYSLPLGFQNSKDTFTNLYKSCVKLERYA 470
Query: 406 VAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR---------PVEE 454
+ F N P L AL + + P G ++ LP+ DDIR P+ +
Sbjct: 471 MLFGCTKKNALPSLFALYPTNIAKSSNQDSLPEGFLLVRLPWLDDIRALPPHMIKNPLIQ 530
Query: 455 LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQ--ALALEEDD 511
++P A D K LMK++ +++++ F NPSL Y VL+ L +E D
Sbjct: 531 FDKSKSSLPTALVDSFK---VLMKKLHIQNYNPGDFPNPSLNFFYEVLKNDLLQIESSD 586
>gi|112362615|emb|CAL36004.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ + + P D+E
Sbjct: 159 GQKQLSNKRVFLFTDVDKPQEAQDTDERARLRRLTIDLFDNKVNFATFFIGYANKPFDDE 218
Query: 221 FKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---II 273
F Y+D++ L ++ L G + + + ++ R+ K+ VKRI F +I
Sbjct: 219 F-----YSDILQLGSGINKNMGLNSEFDGPNTKPIDAKYIKSRILRKKEVKRIMFQCPLI 273
Query: 274 AN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKR 327
+ I + Y + G + + ++R F+ TG + +
Sbjct: 274 FDEKANFIIGIKGYTMCTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPITGEDVSGNTVK 333
Query: 328 FQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFPS 380
PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 334 VYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEGF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNPLL 504
Query: 496 QRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
Q+HY VL L EE++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLR 543
>gi|112362613|emb|CAL36005.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ + + P D+E
Sbjct: 159 GQKQLSNKRVFLFTDVDKPQEAQDTDERARLRRLTIDLFDNKVNFATFFIGYANKPFDDE 218
Query: 221 FKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---II 273
F Y+D++ L ++ L G + + + ++ R+ K+ VKRI F +I
Sbjct: 219 F-----YSDILQLGSGINKNMGLNSEFDGPNTKPIDAKYIKSRILRKKEVKRIMFQCPLI 273
Query: 274 AN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKR 327
+ I + Y + G + + ++R F+ TG + +
Sbjct: 274 FDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPITGEDVSGNTVK 333
Query: 328 FQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFPS 380
PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 334 VYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEGF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNPLL 504
Query: 496 QRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
Q+HY VL L EE++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLR 543
>gi|112362635|emb|CAL35994.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362637|emb|CAL35993.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362639|emb|CAL35992.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ + + P D+E
Sbjct: 159 GQKQLSNKRVFLFTDVDKPQEAQDTDERARLRRLTIDLFDNKVNFATFFIGYANKPFDDE 218
Query: 221 FKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---II 273
F Y+D++ L ++ L G + + + ++ R+ K+ VKRI F +I
Sbjct: 219 F-----YSDILQLGSGINKNMGLNSEFDGPNTKPIDAKYIKSRILRKKEVKRIMFQCPLI 273
Query: 274 AN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKR 327
+ I + Y + G + + ++R F+ TG + +
Sbjct: 274 FDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPITGEDVSGNTVK 333
Query: 328 FQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFPS 380
PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 334 VYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFVLSP------SSAKEYNEGF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNPLL 504
Query: 496 QRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
Q+HY VL L EE++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFEENEKPNAKKDRIMREDDSLR 543
>gi|221485305|gb|EEE23586.1| ATP-dependent DNA helicase II, 70 kDa subunit, putative [Toxoplasma
gondii GT1]
Length = 859
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 390 IFIALHRSMLRLNRFAVAFY----GNPSNPRLVALVAQ-DEIVRAGGQVEPPGMHMIYLP 444
+F A ++ + AVA G+P + LVAL+ Q +E+ AG V+ PG+H++ LP
Sbjct: 544 LFSAFLMTLCKCELVAVARLVSKRGSPVS--LVALLPQLEEVDEAGNTVQAPGLHLLRLP 601
Query: 445 YSDDIRPVEELHSDT-------------DAVPRASDDEVKKAAAL--MKRIDLKDFSVCQ 489
+++DIR ++ S D R ++E + AA+ + ++DF Q
Sbjct: 602 FAEDIRQIDFPWSSAAGCRGDGGPADLQDKAARKEENERRIQAAMRALSAFSVEDFHPHQ 661
Query: 490 FANPSLQRHYAVLQALAL--EEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYG 544
N +LQRH+A+++A AL EE ++P PD + + A+ E+K SVYG
Sbjct: 662 LRNDALQRHFALVEAFALGAEEAELP--APTLAPDLDVLD--NAEDAIREWKESVYG 714
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 24/221 (10%)
Query: 125 EESFEKEIGSQYGIVSGSRENSLYNALWV-----AQGLLRKGSSKTADKRILLFTNEDDP 179
EE F + G S L + WV + G R+G+ +RI+LFT+ D P
Sbjct: 176 EEDFRTQFGDSLSRAS-PECPPLADVFWVLSHALSAGTRRRGARALIQQRIILFTSNDSP 234
Query: 180 FGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLS-PPDEEFKVSHFYADMIGLEGDDL 238
+ GA + T QR +D ++ G+ + L+PL P F + F+ D + L D+L
Sbjct: 235 CPT--GAPEALAAAT--QRLRDLREDGVDVCLVPLEFPGTAPFSMETFWGDALCLTDDEL 290
Query: 239 ALFMPS--AGQKLEDMKDQLRKRM----FSKRIVKRISFIIANGLSIELNTYALIRPTVP 292
S + K +R RM + R++ R +++ ++ L+ +RP++
Sbjct: 291 REGEGSNKTTPTVSAYKSYVRLRMDELNDNVRLLDRTQRVLS---TVPLH----LRPSLQ 343
Query: 293 GAITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYKG 333
+ L SV PL + + AD P + Q G
Sbjct: 344 LPVCLLSSVRPQPLPRPHAVLTADEKQEPLRPGRAVQILPG 384
>gi|112362617|emb|CAL36003.1| HDF1 protein [Saccharomyces paradoxus]
gi|112362619|emb|CAL36002.1| HDF1 protein [Saccharomyces paradoxus]
Length = 602
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ + + P D+E
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDTNERARLRRLTIDLFDNKVNFATFFIGYANKPFDDE 218
Query: 221 FKVSHFYADMIGLE---GDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---II 273
F Y+D++ L ++ L G + + + ++ R+ K+ VKRI F +I
Sbjct: 219 F-----YSDILQLGSGINKNMGLNSEFDGPNTKPIDARYIKSRILRKKEVKRIMFQCPLI 273
Query: 274 AN---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKR 327
+ I + Y + G + + ++R F+ TG + +
Sbjct: 274 FDEKANFIIGIKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLHPITGEDVSGNTVK 333
Query: 328 FQPYKGENIKFSVQELSEIKRVST---GHLRLHGF----KPLSYLKDYHNLRPSTFVFPS 380
PY +I S + + T LR+ GF K + Y ++N+ S+F+ P
Sbjct: 334 VYPYGDLDINLSDNQDQIVMEAYTQKDAFLRIIGFRSSNKSIHY---FNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L +++ + ++ A+ + SN P L L + + G
Sbjct: 391 EAKYEGSIRTLASLLKTLRKKDKIAMLWGKLKSNSHPSLFILSP------SSAKEYNEGF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKK-AAALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ +F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKITQSIMGHFNLRDGYNPSEFKNPLL 504
Query: 496 QRHYAVLQALAL------EEDDMPEIKDETVPDEEGMAR 528
Q+HY VL L EE++ P K + V E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFEENEKPNAKKDRVMREDDSLR 543
>gi|112362609|emb|CAL36007.1| HDF1 protein [Saccharomyces mikatae]
Length = 594
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 167/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK-DAQDLGISIELLPLSPPDE 219
G + +KR+ LFT+ D P A+N R ++R D D I+ + +
Sbjct: 159 GQKQLNNKRVFLFTDNDKP-----QEAQNADDRARLRRLTVDLFDNKINFTTFFIGYVNN 213
Query: 220 EFKVSHFYADMIGL---EGDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISF---- 271
F + FY+D++ L + + L G + + + ++ R+ KR VKRI F
Sbjct: 214 SFH-NEFYSDILQLGSHKNKTIGLNSEFDGPNTKPIDAKYIKSRILRKREVKRIMFQCQL 272
Query: 272 ---------IIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ 322
I G +I Y+ + V + + ++R F+ +G +
Sbjct: 273 IFDEKTDFIIGIKGYTI----YSHEKAGVRYKLVYEHEDIRQEAYSKRKFLNFMSGEDVT 328
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVF 378
+ + PY +I S + + T L++ GF+ S + ++N+ S+F+
Sbjct: 329 DNTVKVYPYGDLDINLSEHQDQIVMEAYTRKDAFLKITGFRSSSKSMHYFNNIEKSSFIV 388
Query: 379 PSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGM 438
P +++ GS +L + + + ++ A+ + SN V ++ + G
Sbjct: 389 PDEEKYEGSIRALTSLLKILRKKDKIAILWGKLKSNSHPSLFVLSPSNIKEYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK +++ +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSDYEIDYDNMKKVTQSIIGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQ------ALALEEDDMPEIKDETVPDEEGMAR 528
Q+HY VL A EE++ + K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQTETAFEENETSDTKMDRIIHEDDSLR 543
>gi|414866291|tpg|DAA44848.1| TPA: hypothetical protein ZEAMMB73_759063 [Zea mays]
Length = 152
Score = 62.4 bits (150), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 30/38 (78%)
Query: 50 DQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFFNT 87
++ ETHFH V+CI +SLKTQII R YDEVAIC FNT
Sbjct: 103 NEKQETHFHTIVNCITESLKTQIIGRTYDEVAICLFNT 140
>gi|112362607|emb|CAL36008.1| HDF1 protein [Saccharomyces mikatae]
gi|112362611|emb|CAL36006.1| HDF1 protein [Saccharomyces mikatae]
Length = 594
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 164/395 (41%), Gaps = 37/395 (9%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK-DAQDLGISIELLPLSPPDE 219
G + +KR+ LFT+ D P A+N R ++R D D I+ + +
Sbjct: 159 GQKQLNNKRVFLFTDNDKP-----QEAQNADDRARLRRLTVDLFDNKINFTTFFIGYVNN 213
Query: 220 EFKVSHFYADMIGL---EGDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISFIIA- 274
F + FY+D++ L + + L G + + + ++ R+ KR VKRI F
Sbjct: 214 SFD-NEFYSDILQLGSHKNKTIGLNSEFDGPNTKPIDAKYIKSRILRKREVKRIMFQCQL 272
Query: 275 -----NGLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
I + Y + G + + ++R F+ +G + +
Sbjct: 273 IFDEKTDFIIGIKGYTMYSHEKAGVRYKLVYEHEDIRQEAYSKRKFLNFMSGEDVTDNTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P ++
Sbjct: 333 KVYPYGDLDINLSEHQDQIVMEAYTRKDAFLKITGFRSSSKSMHYFNNIEKSSFIVPDEE 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIY 442
+ GS +L + + + ++ A+ + SN V ++ + G ++
Sbjct: 393 KYEGSIRALTSLLKILRKKDKIAILWGKLKSNSHPSLFVLSPSNIKEYNE----GFYLYR 448
Query: 443 LPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQRHY 499
+P+ D+IR L S D D D +KK +++ +L+D ++ F NP LQ+HY
Sbjct: 449 VPFLDEIRKFPSLLSYDDGSDHEIDYDNMKKVTQSIIGYFNLRDGYNPSDFKNPLLQKHY 508
Query: 500 AVLQ------ALALEEDDMPEIKDETVPDEEGMAR 528
VL A EE++ + K + + E+ R
Sbjct: 509 KVLHDYLLQTETAFEENETSDTKMDRIVHEDDSLR 543
>gi|112362605|emb|CAL36009.1| HDF1 protein [Saccharomyces mikatae]
Length = 596
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 164/395 (41%), Gaps = 37/395 (9%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK-DAQDLGISIELLPLSPPDE 219
G + +KR+ LFT+ D P A+N R ++R D D I+ + +
Sbjct: 159 GQKQLNNKRVFLFTDNDKP-----QEAQNADDRARLRRLTVDLFDNKINFTTFFIGYVNN 213
Query: 220 EFKVSHFYADMIGL---EGDDLALFMPSAGQKLEDMKDQ-LRKRMFSKRIVKRISFII-- 273
F + FY+D++ L + + L G + + + ++ R+ KR VKRI F
Sbjct: 214 SFD-NEFYSDILQLGSHKNKTIGLNSEFDGPNTKPIDAKYIKSRILRKREVKRIMFQCQL 272
Query: 274 ----ANGLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
I + Y + G + + ++R F+ +G + +
Sbjct: 273 IFDEKTDFIIGIKGYTMYSHEKAGVRYKLVYEHEDIRQEAYSKRKFLNFMSGEDVTDNTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P ++
Sbjct: 333 KVYPYGDLDINLSEHQDQIVMEAYTRKDAFLKITGFRSSSKSMHYFNNIEKSSFIVPDEE 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIY 442
+ GS +L + + + ++ A+ + SN V ++ + G ++
Sbjct: 393 KYEGSIRALTSLLKILRKKDKIAILWGKLKSNSHPSLFVLSPSNIKEYNE----GFYLYR 448
Query: 443 LPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQRHY 499
+P+ D+IR L S D D D +KK +++ +L+D ++ F NP LQ+HY
Sbjct: 449 VPFLDEIRKFPSLLSYDDGSDHEIDYDNMKKVTQSIIGYFNLRDGYNPSDFKNPLLQKHY 508
Query: 500 AVLQ------ALALEEDDMPEIKDETVPDEEGMAR 528
VL A EE++ + K + + E+ R
Sbjct: 509 KVLHDYLLQTETAFEENETSDTKMDRIVHEDDSLR 543
>gi|50289869|ref|XP_447366.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526676|emb|CAG60303.1| unnamed protein product [Candida glabrata]
Length = 606
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 162/370 (43%), Gaps = 34/370 (9%)
Query: 160 KGSSKTADKRILLFTNEDDPFGSIKGAAKN-DMTRTTMQRAKDAQDLGISIELLPLSPPD 218
+G + K++ LFT+ D P +++ ++ D+ + + KD D I+ +S D
Sbjct: 169 EGQKEFNSKKVFLFTDNDLP--NVESQQRSIDVLKGIL---KDIDDNMINFTNFFISKKD 223
Query: 219 EEFKVSHFYADMIGLEGD-----DLALFMPSAGQ-KLEDMKDQLRKRMFSKRIVKRISFI 272
+ F + FY+ ++ + D A F PS + D+K+++ +R +R+V + +
Sbjct: 224 KPFNPA-FYSKVLRNDRDYNSLGSQAYFGPSTKPIGVNDIKERIFQRKEIRRVVFQCPLV 282
Query: 273 IANGLS--IELNTYALIRPTVPGAITWLDSVTNHPLKTE----RSFICADTGALMQEPAK 326
+ G + I + Y++ G++ + N ++ E R FI TG + +
Sbjct: 283 LDEGTNFVISIKGYSIFNHE-KGSVRYKLVYENQEIRKEAFSKRKFINPKTGEDVSKQTV 341
Query: 327 RFQPYKGENIKFSVQELSEIKRV---STGHLRLHGF-KPLSYLKDYHNLRPSTFVFPSDK 382
+ PY + I+ + ++ V ++ L + GF + L Y+N+ + F+ P +
Sbjct: 342 KIIPYGEKEIEMEDKNIANALNVYGNTSASLTVIGFLNEDNSLVFYNNIDKTLFITPDEN 401
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHM 440
+ GS F +L R++ +L + V + SN P L L + G ++
Sbjct: 402 VIEGSFTAFASLFRTLKKLKKVGVVWGSTKSNSSPSLYLLWP------SKDDDNNQGFYL 455
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASDDEVKK-AAALMKRIDLKD-FSVCQFANPSLQRH 498
+P+ D+IR L + VK+ ++ +LK + +F NP+L RH
Sbjct: 456 TKVPFIDEIRKYPTLSNININEEWEEYKNVKELTQGIISHFNLKSGYHAEEFRNPALNRH 515
Query: 499 YAVLQALALE 508
Y +L L+
Sbjct: 516 YKLLHDYLLQ 525
>gi|255712197|ref|XP_002552381.1| KLTH0C03586p [Lachancea thermotolerans]
gi|238933760|emb|CAR21943.1| KLTH0C03586p [Lachancea thermotolerans CBS 6340]
Length = 578
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 155/371 (41%), Gaps = 35/371 (9%)
Query: 160 KGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDE 219
+G +K+I LFT+ D P S AKN + + D D I+I +
Sbjct: 147 QGQKAYNNKKIFLFTDNDRPKESDDREAKNRLRKVI----DDLDDSFINIIPFFVGSEQR 202
Query: 220 EFKVSHFYADMIGLEGDDLALFMP--SAGQKLEDMKDQL-RKRMFSKRIVKRISF---II 273
F S FY+D++ L A P G + +L + R+ K+ +KR+ F +I
Sbjct: 203 PFDQS-FYSDILKLGAKKKASDGPFKYEGPNTTPISAKLIKSRVLRKKEIKRVRFQCSLI 261
Query: 274 ANGLS---IELNTYALIRPTVPGA----ITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
N S + + Y I G+ + D + L + R ++ A+TG + E
Sbjct: 262 LNEASDFQVSIKGYTTISHERAGSKYKQVYDHDGLRKEAL-SHRKYLDANTGEDVTERVV 320
Query: 327 RFQPYKGENIKFSVQELSEIKRVSTGH---LRLHGFKPLSYLKDY-HNLRPSTFVFPSDK 382
+ + +I+ S E++++ R + + L+L GF+ + Y +N+ S+FV P D
Sbjct: 321 KVFKFAEVDIELSEDEIAKMNRDYSSYDSFLKLVGFRDTNRCVFYFNNISNSSFVVPDDS 380
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAF--YGNPSNPRLVALVAQDEIVRAGGQVEPPGMHM 440
GS +L R + + AV + + SNP L L + G ++
Sbjct: 381 VFKGSIKTMASLFRKLREKQKSAVVWGKLKSNSNPSLYTLTP------SNFNDHNEGFYL 434
Query: 441 IYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKAAALMKRIDLK-DFSVCQFANPSLQR 497
+P+ D+IR P H + + + K L+ L+ + F NP+LQ+
Sbjct: 435 TRVPFIDEIRKFPPTAYHGNLSKT-KTFEQMCKITETLISYFSLRHSYRPSDFENPTLQK 493
Query: 498 HYAVLQALALE 508
H+ +L L+
Sbjct: 494 HFELLHDYLLQ 504
>gi|385305666|gb|EIF49624.1| hdf1 protein [Dekkera bruxellensis AWRI1499]
Length = 587
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 160/370 (43%), Gaps = 46/370 (12%)
Query: 168 KRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA---KDAQDLGISIELLPLSPPDEEFKVS 224
++I LFT+ D PF G+ TRTT+Q D + IS L+P+ ++F ++
Sbjct: 192 RKIFLFTDCDKPFN---GSTS---TRTTLQNIIHDLDTARIRISPFLIPMDT-GKQFDLA 244
Query: 225 HFYADMIGLEGDDLALFMPSAGQK-----------LEDMKDQLRKRMFSKRIVKRISFII 273
+ I LE +++ GQK LE +++ + + +R V S ++
Sbjct: 245 EY---KILLEVGEISNLDQIKGQKTHYKPSIEQISLEKIREXIERTQQLRRSVFACSLVL 301
Query: 274 ANGLSIELNTYALI-RPTVPGAITWLDSVTNHPLKTERSFICADT-GALMQEPAKRFQ-- 329
+N ++I + Y + TV + D + + +++ A+T G ++ + F+
Sbjct: 302 SNTMTISIRGYRIFSESTVKLPEHFYDDQGIYKVVHIKTYKLAETSGEILDKDKVEFKKV 361
Query: 330 -PYKGENIKFSVQELSEIKRVSTGH---LRLHGFKPLSYLKDYHNLRPSTFVFPSDK-EV 384
P + + I +EI + + H LR+ GF+ L Y + + FV D
Sbjct: 362 FPVQDQFIDIDKAFWNEILQFNEKHKPLLRVIGFRDLQYYNPSYTIGKPIFVVGDDNGSF 421
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNP---SNPRLVALVAQDEIVRAGGQVEPPGMHMI 441
S F AL++++L N+ + +G P S P + ++ D + P G+ MI
Sbjct: 422 THSNRTFSALYQALLHKNKMCLV-WGMPRKLSYPSMYYMIPTDSTLEKSV---PEGLMMI 477
Query: 442 YLPYSDDIRPVEE-LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYA 500
+PY D IR + + + + + ++ +KR D S ANP L HY
Sbjct: 478 QIPYRDQIRLLPDYITAVLKPYKVLKQNLFERLTTKLKRNGF-DLS----ANPQLLWHYK 532
Query: 501 VLQALALEED 510
VL+ L+ +
Sbjct: 533 VLEDFILQRE 542
>gi|154341010|ref|XP_001566458.1| putative KU70 protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063781|emb|CAM39969.1| putative KU70 protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 964
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 146/369 (39%), Gaps = 77/369 (20%)
Query: 326 KRFQPYKGENIKFSVQELSEIKRVST-----GHLRLHGFKPL-SYLKDYHNLRPSTFVFP 379
+ + P E + F++ E I V+ G LH FK L +K H++ S+F+
Sbjct: 596 RYYAPAGKERVYFTMAERKRIVEVAAAGAEPGFTVLH-FKDLVDAVKREHSVGRSSFLHS 654
Query: 380 S-DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNP--SNPRLVALVAQDEIV-----RAGG 431
+ S +F+ R + + A+A Y S PRLVALV ++ R
Sbjct: 655 CVQRGGAHSHRLFVLFVRRLRAKKKVAIAQYCTSAGSAPRLVALVPSPDLTGHPERRDQV 714
Query: 432 QVEPPGMHMIYLPYSDDIRPVEELHSDT----DAVPRASDDEV-----KKAAALMKRIDL 482
V+ G++++ LPY++D+R V EL + T A P D V + A L+ + +
Sbjct: 715 PVDGLGLYVVPLPYAEDLRAVPELRACTLTNKHATPVLGDSSVDPMHLELAKQLVSSLTV 774
Query: 483 KDFSVCQFANPSLQRHYAVLQALA---------------------LEE--------DDMP 513
+ V NP+LQR Y LQ LA +EE D+ P
Sbjct: 775 S-YQVDAVLNPALQRQYRKLQELARRLFPLSVNPLYLDVETSLARVEEEDAGAEDTDEAP 833
Query: 514 EIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDE-----EGDVKVSEASRKRKAATE- 567
D T+PD EGM F V G++YD V R R A E
Sbjct: 834 WELDGTLPDYEGMR--SFAALFHSFNKEVLGNDYDAFLYCPHPRVAAMATRRPRGGAAEV 891
Query: 568 NAAKECANYDWADLADKGKLKE-------------MTVQELKLYLMAHNLSTTG--RKET 612
+AA A + D +++ + + +LK YL A N+S G RK
Sbjct: 892 SAAGGSAAVSTEEDGDPVPIEQLIRHAAAENAWDGLIIPQLKRYLTATNVSAGGARRKAD 951
Query: 613 LISRILTHM 621
LI + H
Sbjct: 952 LIELVKQHF 960
>gi|151945992|gb|EDN64224.1| DNA binding protein [Saccharomyces cerevisiae YJM789]
Length = 602
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 168/399 (42%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P+
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPN 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P IK + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNIKKDRMMREDDSLR 543
>gi|112362603|emb|CAL36010.1| HDF1 protein [Saccharomyces kudriavzevii]
Length = 560
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 308 TERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLSY 364
++R F+ + TG + + PY +I FS + + T LR+ GF+ S
Sbjct: 314 SKRRFLNSMTGEDVTGNTVKVYPYGDLDINFSENQNQIVMEAYTQKDAFLRIIGFRSSSK 373
Query: 365 LKDY-HNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQ 423
Y +N+ STF+ P + + GS +L +++ + ++ A+ + SN V
Sbjct: 374 AIHYFNNIEKSTFIVPDEAKYEGSVRTLTSLFKTLRKKDKIAILWGKLKSNSHASLFVLS 433
Query: 424 DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA--LMKRID 481
++ + G ++ +P+ D+IR L S + D E K ++ +
Sbjct: 434 PSSIKEYNE----GFYLYRVPFLDEIRKFPSLLSYDNGEKYKLDYENMKKITQNIIGYFN 489
Query: 482 LKD-FSVCQFANPSLQRHYAVLQALALEEDDMPE 514
LKD ++ F NPSLQ+H+ VL L+ + PE
Sbjct: 490 LKDGYNPSDFKNPSLQKHFKVLHDYLLQIETTPE 523
>gi|112362599|emb|CAL36012.1| HDF1 protein [Saccharomyces kudriavzevii]
gi|112362601|emb|CAL36011.1| HDF1 protein [Saccharomyces kudriavzevii]
gi|401840595|gb|EJT43350.1| YKU70-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 602
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 308 TERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLSY 364
++R F+ TG + + PY +I FS + + T LR+ GF+ S
Sbjct: 314 SKRKFLNPMTGEDVTSSTVKVYPYGDLDINFSENQNQIVMEAYTQKDAFLRIIGFRSSSK 373
Query: 365 LKDY-HNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQ 423
Y +N+ S F+ P + + GS +L +++ + ++ A+ + +N V
Sbjct: 374 AIHYFNNIEKSAFIVPDEAKYEGSVRTLTSLFKTLRKKDKIAILWGKLKTNSHASLFVLS 433
Query: 424 DEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA--LMKRID 481
++ + G ++ +P+ D+IR L S + D E K +M +
Sbjct: 434 PSSIKEYNE----GFYLYRVPFLDEIRKFPSLLSYDNGEKYKLDYENMKKITQNIMGYFN 489
Query: 482 LKD-FSVCQFANPSLQRHYAVLQALALEEDDMPE 514
LKD ++ F NPSLQ+H+ VL L+ + PE
Sbjct: 490 LKDGYNPSDFRNPSLQKHFKVLHDYLLQIETTPE 523
>gi|190408510|gb|EDV11775.1| yeast Ku70 protein [Saccharomyces cerevisiae RM11-1a]
Length = 602
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D VKK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNVKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|224003101|ref|XP_002291222.1| ATP dependent DNA ligase 1 [Thalassiosira pseudonana CCMP1335]
gi|220972998|gb|EED91329.1| ATP dependent DNA ligase 1, partial [Thalassiosira pseudonana
CCMP1335]
Length = 597
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 185/463 (39%), Gaps = 37/463 (7%)
Query: 147 LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLG 206
L AL A K K + +FTN+DDP KG + +M + Q+ G
Sbjct: 150 LRQALHDANKAFMKAKKLPDSKAVWIFTNQDDP---CKGNIREMSQLASM--GHEYQENG 204
Query: 207 ISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIV 266
I + LLPL P + +F FY +I + +E + D + + R
Sbjct: 205 IDLFLLPL-PKNMKFDKDVFYKTIID------TMTQSDGAVDIEVVLDFFDRAIRKVRKY 257
Query: 267 KRISFIIA------NGLSIELNTYALIR-PTVPGAITWLDSVTNHPLKTERSFICADTGA 319
+ ++ N I L+ +++++ T P A+ + K ++ D+
Sbjct: 258 SSLPLLLPGWKDRENDPGIMLDLFSMVQVKTKPQAVIVHQEMNRATTKVTKTVDKVDSIE 317
Query: 320 LMQEPAKRFQPYKGENIKFSVQELSEIK----RVSTGHLRLHGFKPLSYLKDYHNLRPST 375
+ E + + G + +++++K V L + GFK +S L + +
Sbjct: 318 IPPERLYTYAEFCGSRVSMKNVDVTKMKSLCNSVRAPSLLILGFKRMSTLSPINLVSKPL 377
Query: 376 FVFPSDKEVVGSTCIFIALHRSMLRLNRFAVA--FYGNPSNPRLVALVAQDEIVRAGGQV 433
+D + GS L +SMLR + +AV + + +++ALV Q++ R G V
Sbjct: 378 LAASNDYLIPGSGKALFNLKQSMLRKDVYAVGELCLKSSAASKMIALVPQND-SRGGFLV 436
Query: 434 EPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANP 493
+++P+ DD R V D V R + D K + + ++ + NP
Sbjct: 437 -------LHIPFKDDTRGVAS--DDYGFVDRNAVDAAKSLVSKTAITNPENIASILPENP 487
Query: 494 SLQRHYAVLQALALEEDDMPEIKDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDEEGDV 553
L+ Y L+++ L +++ + +D+ D GM +E F LS+ D+ + V
Sbjct: 488 LLRHFYTFLESVTL-GNELQKPQDDARMDVAGMLEQA-RDEIENFSLSLPEDDQPVKKAV 545
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELK 596
K ++ NA E W ++ ++ T ELK
Sbjct: 546 KRKTSASSGSFKRANAVPERIPNKWIEMYRDDAVENCTANELK 588
>gi|377552385|gb|AFB69791.1| DSB repair complex subunit Ku70, partial [Aspergillus flavus]
Length = 197
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 417 LVALVAQDEIV-RAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVPRASDDEVKKA 473
L A+VA +E + +G Q PPGM +I LP++DD+R P LH P D+++
Sbjct: 15 LGAMVAGEEKLDESGVQKFPPGMWIIPLPFADDVRQNPETTLH----VAPEPLIDQMRYI 70
Query: 474 AALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVP 521
+ ++ + ++ NPSLQ HY +LQALAL+ED + +D+T+P
Sbjct: 71 VQQL-QLPKASYGPFKYPNPSLQWHYRILQALALDEDLPEKPEDKTLP 117
>gi|349580576|dbj|GAA25736.1| K7_Yku70p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 602
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 165/397 (41%), Gaps = 41/397 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIAN 275
F + FY+D++ L E L K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAK-YIKSRILRKKEVKRIMFQCPL 272
Query: 276 GLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
L + N Y + V + + ++R F+ TG +
Sbjct: 273 ILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGKTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P +
Sbjct: 333 KVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPDEA 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAF--YGNPSNPRLVALVAQDEIVRAGGQVEPPGMHM 440
+ GS +L + + + ++ A+ + + S+P L L V+ + G ++
Sbjct: 393 KYEGSIRTLASLLKILRKKDKIAILWGKLKSSSHPSLYTLSPSS--VKDYNE----GFYL 446
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQR 497
+P+ D+IR L S D D D +KK ++M +L+D ++ F NP LQ+
Sbjct: 447 YRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQK 506
Query: 498 HYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
HY VL L+ E++ P K + + E+ R
Sbjct: 507 HYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|112362579|emb|CAL36022.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHANENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|365763979|gb|EHN05505.1| Yku70p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 602
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 164/397 (41%), Gaps = 41/397 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIAN 275
F + FY+D++ L E L K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAK-YIKSRILRKKEVKRIMFQCPL 272
Query: 276 GLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
L + N Y + V + + ++R F+ TG +
Sbjct: 273 ILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGKTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P +
Sbjct: 333 KVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPDEA 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHM 440
+ GS +L + + + ++ A+ + SN P L L V+ + G ++
Sbjct: 393 KYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GFYL 446
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQR 497
+P+ D+IR L S D D D +KK ++M +L+D ++ F NP LQ+
Sbjct: 447 YRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQK 506
Query: 498 HYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
HY VL L+ E++ P K + + E+ R
Sbjct: 507 HYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|3765|emb|CAA49840.1| high affinity DNA binding protein [Saccharomyces cerevisiae]
Length = 602
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 164/397 (41%), Gaps = 41/397 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIAN 275
F + FY+D++ L E L K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAK-YIKSRILRKKEVKRIMFQCPL 272
Query: 276 GLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
L + N Y + V + + ++R F+ TG +
Sbjct: 273 ILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGKTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P +
Sbjct: 333 KVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPDEA 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHM 440
+ GS +L + + + ++ A+ + SN P L L V+ + G ++
Sbjct: 393 KYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GFYL 446
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQR 497
+P+ D+IR L S D D D +KK ++M +L+D ++ F NP LQ+
Sbjct: 447 YRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQK 506
Query: 498 HYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
HY VL L+ E++ P K + + E+ R
Sbjct: 507 HYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|112362595|emb|CAL36014.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|6323940|ref|NP_014011.1| Yku70p [Saccharomyces cerevisiae S288c]
gi|1346259|sp|P32807.2|KU70_YEAST RecName: Full=ATP-dependent DNA helicase II subunit 1; AltName:
Full=ATP-dependent DNA helicase II subunit Ku70;
AltName: Full=High affinity DNA-binding factor subunit 1
gi|287606|dbj|BAA03648.1| NES24 [Saccharomyces cerevisiae]
gi|825550|emb|CAA89782.1| Nes24p [Saccharomyces cerevisiae]
gi|112362573|emb|CAL36025.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362577|emb|CAL36023.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362581|emb|CAL36021.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362583|emb|CAL36020.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362585|emb|CAL36019.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362587|emb|CAL36018.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362591|emb|CAL36016.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362593|emb|CAL36015.1| HDF1 protein [Saccharomyces cerevisiae]
gi|112362597|emb|CAL36013.1| HDF1 protein [Saccharomyces cerevisiae]
gi|207342065|gb|EDZ69944.1| YMR284Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270684|gb|EEU05847.1| Yku70p [Saccharomyces cerevisiae JAY291]
gi|259148872|emb|CAY82117.1| Yku70p [Saccharomyces cerevisiae EC1118]
gi|285814290|tpg|DAA10185.1| TPA: Yku70p [Saccharomyces cerevisiae S288c]
gi|392297457|gb|EIW08557.1| Yku70p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 602
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 164/397 (41%), Gaps = 41/397 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIAN 275
F + FY+D++ L E L K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAK-YIKSRILRKKEVKRIMFQCPL 272
Query: 276 GLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
L + N Y + V + + ++R F+ TG +
Sbjct: 273 ILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGKTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P +
Sbjct: 333 KVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPDEA 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHM 440
+ GS +L + + + ++ A+ + SN P L L V+ + G ++
Sbjct: 393 KYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GFYL 446
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQR 497
+P+ D+IR L S D D D +KK ++M +L+D ++ F NP LQ+
Sbjct: 447 YRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQK 506
Query: 498 HYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
HY VL L+ E++ P K + + E+ R
Sbjct: 507 HYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|112362589|emb|CAL36017.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|51013177|gb|AAT92882.1| YMR284W [Saccharomyces cerevisiae]
Length = 602
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|255728487|ref|XP_002549169.1| hypothetical protein CTRG_03466 [Candida tropicalis MYA-3404]
gi|240133485|gb|EER33041.1| hypothetical protein CTRG_03466 [Candida tropicalis MYA-3404]
Length = 723
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCI----------FIALHRSMLRLN 402
+L+L GF+ L+ + P TFV + + +T + F +L+RS ++L
Sbjct: 422 YLKLIGFRDLNQFNPVYTCGPPTFVTADIENGLVTTSLQGGFSNSLETFASLYRSCIKLK 481
Query: 403 RFAVAFYGNPSN--PRLVAL---VAQDEIVRAGGQVEPPGMHMIYLPYSDDIR--PVEEL 455
++A+ F SN P L AL + G P G +I LP+ +D+R P E +
Sbjct: 482 QYAIVFGCTRSNSRPFLYALYPTCTTNSSKLISGSEFPQGFLLIKLPWLEDVRSLPGEYI 541
Query: 456 HSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEI 515
+ + DD V+ L+ + L+ ++ F NP++ Y V + L+ D P+
Sbjct: 542 NHTKSEPIQTDDDLVENFKELLPKFKLQPYNPKDFPNPTMNYFYKVAKHEILQIDFTPQD 601
Query: 516 KDETVPDEEGMARPGVVKAVEEFKLSVYGD 545
K + D +K ++E K S+ D
Sbjct: 602 KILSKND-------ITIKKLQEVKQSISND 624
>gi|323303481|gb|EGA57275.1| Yku70p [Saccharomyces cerevisiae FostersB]
Length = 602
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 166/399 (41%), Gaps = 45/399 (11%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFII 273
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQC 270
Query: 274 ANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEP 324
L + N Y + V + + ++R F+ TG +
Sbjct: 271 PLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGK 330
Query: 325 AKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPS 380
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 331 TVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD 390
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGM 438
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GF 444
Query: 439 HMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSL 495
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP L
Sbjct: 445 YLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLL 504
Query: 496 QRHYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
Q+HY VL L+ E++ P K + + E+ R
Sbjct: 505 QKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|343957947|emb|CBY93682.1| putative yku70 protein [Glomus diaphanum]
Length = 210
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 23/162 (14%)
Query: 336 IKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG-STCIFIAL 394
I F+ E++E++R L L GFKP + K ++N+ + F++P ++++ + C +
Sbjct: 68 IAFTKAEVAELRRFGQKGLNLIGFKPSNAAKFHYNVEHALFLYPDERKMSKVAICYLVKR 127
Query: 395 HRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIV-RAGGQVEPPGMHMIYLPYSDDIRPVE 453
S+ P V L AQ E + Q+ PPG +MI LP++DDIRP+
Sbjct: 128 DNSL----------------PSFVVLEAQAEKLDEDKRQIFPPGFNMIPLPFADDIRPLP 171
Query: 454 ELHSDTDAVPRASDDEVKKAAALMKRIDLK-DFSVCQFANPS 494
H++ P D+ + ++ ++ +K F +F NP
Sbjct: 172 P-HAEITPAP---DEMIDILKPIVDKLHMKGGFDPNKFNNPG 209
>gi|209945134|gb|ACI96798.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITW 297
A +P A E + D+ K+ F +R + SF + LS+ + Y R P +
Sbjct: 206 AFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQI 265
Query: 298 LDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------ENIKFSVQELSEI 346
L N ++T+R D G+ E + + G +++ S+ +L+ +
Sbjct: 266 LRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRV 324
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
+ + + L GFK S L + ++P+ F++P D+ ++GS +F AL L ++ A+
Sbjct: 325 RNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERCLVRDKIAI 384
Query: 407 AFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
+ S PR VALV +D+ R+ + G ++YLP + IR
Sbjct: 385 CLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPEAKHIR 435
>gi|156368662|ref|XP_001627811.1| predicted protein [Nematostella vectensis]
gi|156214732|gb|EDO35711.1| predicted protein [Nematostella vectensis]
Length = 248
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
K+ E RK A E KE ++Y+W +L + GKL + V EL YL+ +NLS TG+K+
Sbjct: 92 KIREKQRK-DARQERKKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTGKKKDK 150
Query: 614 ISRILTH 620
I RI H
Sbjct: 151 IRRITVH 157
>gi|322795604|gb|EFZ18283.1| hypothetical protein SINV_00939 [Solenopsis invicta]
Length = 536
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 114/541 (21%), Positives = 213/541 (39%), Gaps = 103/541 (19%)
Query: 13 DEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQI 72
DEE D++ Q + +E ++LVD + KMF E ++ +H Q L+ ++
Sbjct: 11 DEEEDSQVSQWY-GVREATLFLVDTTQKMFEI----ELESKLSHIQKFFKLYKQILRQKL 65
Query: 73 INRLYDEVAICFFNTRKK------KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEE 126
+ D + + F T + KN+Q L+ + + + + +++ + T +K++ +
Sbjct: 66 AWSMKDWMGVVLFGTEESDVNLAWKNIQILHELRIVTLDDLQKIRKLTKNNLKDY----Q 121
Query: 127 SFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGA 186
S + E Y LYNAL + K + +R++L T F
Sbjct: 122 SMKCESKDSY---------PLYNALTYCMDIFVKIKTVLTKRRVVLITCHSPEFSE---- 168
Query: 187 AKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADM-IGLEGDDLALFMPSA 245
D M +AKD +DL I + ++ L + + + FY D+ I D+ ++ ++
Sbjct: 169 ---DEKYRIMNKAKDLKDLDIKLYVIGLG---KSWVPNQFYKDLEILSRKTDVDVYRMTS 222
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHP 305
L D+ Q++ + + R+S + +GL I+L L R L TN
Sbjct: 223 ---LVDLVQQIKA---PSKNIGRLSLQMYDGLEIDLVVRTLGRKRRCLQTKPLSKATNQV 276
Query: 306 LKTERSFICADTGALMQEPA---------------KRFQPYKGENIKFSVQELSEIKRVS 350
L RS G +E + + + G+ ++F+ +EL I+ +
Sbjct: 277 L--SRSTYFKGEGLYDEEDSDSEELDLVIPEDVNLESKELIGGKKLRFTQRELFRIRHIH 334
Query: 351 TGHLRLHGFKPL-----------SYL--KDYHNLRPSTFVFPS---DKEVVGSTCIFIAL 394
+ +++ G KP+ Y DY + R +F S +K I AL
Sbjct: 335 SPAIKVIGVKPIPDDLFRYHVKRKYFVRADYGSTRKDNLLFFSALLNKCAAKGRMIVCAL 394
Query: 395 HRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEE 454
LR+N Y P+ VE G ++ + Y +I E
Sbjct: 395 ---TLRVNTQTTLCYMIPN-------------------VELGGFYLSKIAYQGNIGDKSE 432
Query: 455 --LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDM 512
L+ + SD EVK + R+D+ ++ F + L+ +++ LAL++
Sbjct: 433 ALLYYEN----HVSDKEVKLWKKTIDRLDM-NYHPSMFRSYKLECQIQIVERLALDKKPG 487
Query: 513 P 513
P
Sbjct: 488 P 488
>gi|209945148|gb|ACI96805.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITW 297
A +P A E + D+ K+ F +R + SF + LS+ + Y R P +
Sbjct: 206 AFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQI 265
Query: 298 LDSVTNHPLKTERSFIC---ADTGALMQEPAKRFQPYKG--------ENIKFSVQELSEI 346
L N ++T+R D G+ E + + G +++ S+ +L+ +
Sbjct: 266 LRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRV 324
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
+ + + L GFK S L + ++P+ F++P D+ ++GS +F AL L ++ A+
Sbjct: 325 RNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERCLVRDKIAI 384
Query: 407 AFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
+ S PR VALV +D+ R+ + G ++YLP + IR
Sbjct: 385 CLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPEAKHIR 435
>gi|209945146|gb|ACI96804.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITW 297
A +P A E + D+ K+ F +R + SF + LS+ + Y R P +
Sbjct: 206 AFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQI 265
Query: 298 LDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------ENIKFSVQELSEI 346
L N ++T+R D G+ E + + G +++ S+ +L+ +
Sbjct: 266 LRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRV 324
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
+ + + L GFK S L + ++P+ F++P D+ ++GS +F AL L ++ A+
Sbjct: 325 RNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERCLVRDKIAI 384
Query: 407 AFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
+ S PR VALV +D+ R+ + G ++YLP + IR
Sbjct: 385 CLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPEAKHIR 435
>gi|403218628|emb|CCK73118.1| hypothetical protein KNAG_0M02650 [Kazachstania naganishii CBS
8797]
Length = 574
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 212/528 (40%), Gaps = 57/528 (10%)
Query: 17 DNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRL 76
D E+ + T E +++ ++ + +F P E ++ + + + + +I R
Sbjct: 11 DGEYGYKKYDTHEGILFCIELTGTLFE---PVESLQGRSNLLEILYSLKELMYQLVIVRP 67
Query: 77 YDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEF-DHIEESFEKEIGS- 134
V F T D+N V V E L A+ +K D +E+ EK I
Sbjct: 68 GSSVGCIFHYT-------DINGA-VDGVYEFLPLRDVNAKDMKTLSDFLEDIEEKRINIF 119
Query: 135 QYGIVSGSRENSL---YNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDM 191
QY GS+ SL + + R+ K KR LFT+ D P + +
Sbjct: 120 QYFKFDGSKHVSLERLFQLIGEKYSEEREDGKKFTHKRAFLFTDNDAP----PESNDTEA 175
Query: 192 TRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD------DLALFMPSA 245
TR + D + +S + + F + FY++++ L D P
Sbjct: 176 TRRISKIVDDLDETAVSFTTFFIGSEEAPFD-NRFYSNVLKLGAQLKHSDYDGPSVRPIT 234
Query: 246 GQKLEDMKDQLRKRMFSKRIVKRISFIIANGLS------IELNTYALIRPTVPGA---IT 296
G ++ R+ + +KR F L+ I + YA++ G +T
Sbjct: 235 GS-------DIKARILRGKEIKRTMFQCPLYLNKDSNFIIGIRGYAIVTHEKYGTRYKLT 287
Query: 297 WLDSVTNHPLKTERSFICADTGALMQ-EPAKRFQPYKGENIKFSVQELSEIK---RVSTG 352
+ ++R ++ + TG + + + PY NI+ S + L +++
Sbjct: 288 YEKEDIRQEAFSKRKYLNSKTGEEVDPKDISKVIPYGDVNIELSAEALQQMRASYEEEGP 347
Query: 353 HLRLHGFKPLSY-LKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGN 411
+++ GF+ +K ++N+ +F+ P + + GS +L R++ N+ A+ +G
Sbjct: 348 FMKVLGFRSTDLCVKYFNNIDKPSFIVPDELQYEGSIKTLASLFRTLRSKNKSAI-IWGK 406
Query: 412 PSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVK 471
P + AL +V + + G +M +P+ D++R V D D + +D +
Sbjct: 407 PKSNSNSALYI---MVPSHREDRNDGFYMHRIPFLDELRKVPIKMVDNDWT-QLDNDLLT 462
Query: 472 KAAALMKRIDLKDFSV-CQFANPSLQRHYAVLQALALEEDDMPEIKDE 518
++K +L+ + +F NP +Q +Y VL L+ + EIK E
Sbjct: 463 VTETILKYFNLRQGYIPSEFKNPGIQNYYKVLHDYILQ---VEEIKHE 507
>gi|209945144|gb|ACI96803.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITW 297
A +P A E + D+ K+ F +R + SF + LS+ + Y R P +
Sbjct: 206 AFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQI 265
Query: 298 LDSVTNHPLKTERSFIC---ADTGALMQEPAKRFQPYKG--------ENIKFSVQELSEI 346
L N ++T+R D G+ E + + G +++ S+ +L+ +
Sbjct: 266 LRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRV 324
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAV 406
+ + + L GFK S L + ++P+ F++P D+ ++GS +F AL L ++ A+
Sbjct: 325 RNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERCLVRDKIAI 384
Query: 407 AFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
+ S PR VALV +D+ R+ + G ++YLP + IR
Sbjct: 385 CLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPEAKHIR 435
>gi|344302120|gb|EGW32425.1| hypothetical protein SPAPADRAFT_138036 [Spathaspora passalidarum
NRRL Y-27907]
Length = 682
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 44/296 (14%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG---STCIFIALHRSMLRLNRFAVAF- 408
+L+L GF+ + ++ F+ G S +L+RS ++L ++A+ F
Sbjct: 395 YLKLLGFRDIQNFNPVYSCGSPIFITSDITTSTGYSNSLETLASLYRSCMKLQQYAIVFG 454
Query: 409 -YGNPSNPRLVALV---AQDEIVRAGGQVEPPGMHMIYLPYSDDIRP-----VEELHSDT 459
S+P L AL + G+ P G +I LP+ +D+R ++E+H +
Sbjct: 455 CIKRNSSPYLYALYPTQTMNSTKLVEGEEFPQGFLLIKLPWIEDVRSLPQDFIKEIHEEP 514
Query: 460 DAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDET 519
DA V + +L K+ +L + QF NPSL Y VL+ L+ E
Sbjct: 515 DATL------VDQFKSLFKKYELDSYDPKQFPNPSLNYFYKVLKYEILQM--------EL 560
Query: 520 VPDEEGMARPGV-VKAVEEFKLSVYGDNYDE----EGDVKVSEASR---KRKAATENAAK 571
+P E ++ V ++ + E K D+ + + + ++SE KR + + K
Sbjct: 561 LPGERNLSSNDVTIQRLMELKQKFDSDDSAQYILNQINSRLSELEERIPKRVISEDKPVK 620
Query: 572 ECANYDWADLA-----DKGKLKEMTVQELKLYLMAHNLSTTG--RKETL--ISRIL 618
+ + + A ++GKL + T+++LK ++ + G + ET+ ISR L
Sbjct: 621 KAKVVELDESAVLVKWNQGKLNDFTMEQLKTFVKKYPQIKVGSRKSETIENISRFL 676
>gi|156372635|ref|XP_001629142.1| predicted protein [Nematostella vectensis]
gi|156216135|gb|EDO37079.1| predicted protein [Nematostella vectensis]
Length = 444
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
K+ E RK A E KE ++Y+W +L + GKL + V EL YL+ +NLS TG+K+
Sbjct: 294 KIREKQRK-DARQERKKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTGKKKDK 352
Query: 614 ISRILTH 620
I RI H
Sbjct: 353 IRRITVH 359
>gi|112362575|emb|CAL36024.1| HDF1 protein [Saccharomyces cerevisiae]
Length = 602
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 163/397 (41%), Gaps = 41/397 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEE 220
G + ++KR+ LFT+ D P + + + R T+ D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTI----DLFDNKVNFATFFIGYADKP 214
Query: 221 FKVSHFYADMIGL-----EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIAN 275
F + FY+D++ L E L K D K ++ R+ K+ VKRI F
Sbjct: 215 FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAK-YIKSRILRKKEVKRIMFQCPL 272
Query: 276 GLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQEPAK 326
L + N Y + V + + ++R F+ TG +
Sbjct: 273 ILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDVTGKTV 332
Query: 327 RFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFPSDK 382
+ PY +I S + + T L++ G + S + ++N+ S+F+ P +
Sbjct: 333 KVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGIRSSSKSIHYFNNIDKSSFIVPDEA 392
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHM 440
+ GS +L + + + ++ A+ + SN P L L V+ + G ++
Sbjct: 393 KYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----GFYL 446
Query: 441 IYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPSLQR 497
+P+ D+IR L S D D D +KK ++M +L+D ++ F NP LQ+
Sbjct: 447 YRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQK 506
Query: 498 HYAVLQALALE------EDDMPEIKDETVPDEEGMAR 528
HY VL L+ E++ P K + + E+ R
Sbjct: 507 HYKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLR 543
>gi|156365764|ref|XP_001626813.1| predicted protein [Nematostella vectensis]
gi|156213703|gb|EDO34713.1| predicted protein [Nematostella vectensis]
Length = 359
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 554 KVSEASRKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETL 613
K+ E RK A E KE ++Y+W +L + GKL + V EL YL+ +NLS TG+K+
Sbjct: 203 KIREKQRK-DARQERKKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTGKKKDK 261
Query: 614 ISRILTH 620
I RI H
Sbjct: 262 IRRITVH 268
>gi|156377815|ref|XP_001630841.1| predicted protein [Nematostella vectensis]
gi|156217870|gb|EDO38778.1| predicted protein [Nematostella vectensis]
Length = 1122
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 560 RKRKAATENAAKECANYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILT 619
++RK A + KE ++Y+W +L + GKL + V EL YL+ +NLS TG+K+ I RI
Sbjct: 977 KQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTGKKKDKIRRITV 1036
Query: 620 H 620
H
Sbjct: 1037 H 1037
>gi|290975536|ref|XP_002670498.1| predicted protein [Naegleria gruberi]
gi|284084058|gb|EFC37754.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 466 SDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEG 525
+D ++ A + K++ + DF+ +F NPSLQ+ Y LQALALE ++ +I+D PD+EG
Sbjct: 12 TDKHIQLAKKITKKLTI-DFNPHEFTNPSLQQFYQSLQALALEHSNIEQIEDVLKPDKEG 70
Query: 526 MARPGVVKAVEEFKLSVYGDNYD 548
M + + EFK ++ +YD
Sbjct: 71 MKK--YENLMNEFKDMIFPSDYD 91
>gi|328793265|ref|XP_625058.3| PREDICTED: x-ray repair cross-complementing protein 6-like [Apis
mellifera]
Length = 498
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 168/416 (40%), Gaps = 55/416 (13%)
Query: 140 SGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRA 199
+ S L++ LW A +RI+LFT +D+P N+ R + +A
Sbjct: 77 ASSTSYPLHDVLWYATRAFSTVHITMPMRRIILFTCQDNP----PIIDDNEKHRIRV-KA 131
Query: 200 KDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKR 259
D+ + + ++ L E + FY D+ L G + + K +KD + +
Sbjct: 132 TSYSDINVQLSVIGLG---ENWNHDLFYKDLEMLSGK-----IEADDYKRTSLKDLVEQV 183
Query: 260 MFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGA 319
R + ++ + + ++I+++ L T + TN PL T ++ D
Sbjct: 184 KLPSRNMAKLPWRLGENVTIDVSLRNLSVKTQYLHKENISKQTNIPLTT-CTYFKVDKDD 242
Query: 320 LMQEPA-----------------KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPL 362
+M E +++Q + E I F+ E+ + + L K +
Sbjct: 243 IMTEETDDIENKQTSSPVLEMDIRKYQNFGLEKIYFTQAEVKSLSTTREPGIDLICIKHI 302
Query: 363 SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL-----HRSMLRLNRFAVAFYGNPSNPRL 417
S+ YH P FV PS + +F AL + ++ + + Y S L
Sbjct: 303 SHNLLYHVETPY-FVVPSKSNRKDNKLLFGALLNKCDSKKLMIICAVTIRSYSASS---L 358
Query: 418 VALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSD-----TDAVPRASDDEVKK 472
++ V GG ++ +P+ +++R + E SD + P + V+
Sbjct: 359 YTMIPN---VNNGG------FYLYKMPFRENVRDLSEYFSDFIYNHNEKKPPIEPNGVEL 409
Query: 473 AAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR 528
+MK++++ +++ F+NP LQ +++ LAL+ + + D+T+P E + +
Sbjct: 410 LKNIMKKLNI-EYNPKLFSNPKLQIQLQIVETLALDLEQFKSLPDDTLPKTEEIHK 464
>gi|209945154|gb|ACI96808.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 430
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 26/299 (8%)
Query: 109 QLDRPTARFIKEFDHIEESFEKEIGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADK 168
QL +P EF E + YG+ + + +L K K +
Sbjct: 85 QLTKPIVEHYLEF---MGGVETQFADVYGLAEPDGRGRFDLMIRLCIEMLEKCGKKLNNA 141
Query: 169 RILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYA 228
+I T+ +P S ++ + +Q+A D + ++P+ ++F FY
Sbjct: 142 KIAYVTDVSEPHPS-----NSNHFQAALQKASDLEGKEFEFHVIPMV---DDFDYEPFYK 193
Query: 229 DMIGL-EGDDLALF-MPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYAL 286
+ I L +L F +P A E + D+ K+ F +R + SF + LS+ + Y
Sbjct: 194 EFITLSRAIELDAFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNY 253
Query: 287 I-RPTVPGAITWLDSVTNHPLKTERSFICA---DTGALMQEPAKRFQPYKG--------E 334
R P + L N ++T+R D G+ E + + G
Sbjct: 254 FQRRAYPRKVQILRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGER 312
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F A
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRA 371
>gi|350409180|ref|XP_003488641.1| PREDICTED: X-ray repair cross-complementing protein 5-like [Bombus
impatiens]
Length = 544
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 98/516 (18%), Positives = 212/516 (41%), Gaps = 67/516 (12%)
Query: 136 YGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTT 195
Y ++ S LY+ LW A +R+++FT+ D+P N+ R
Sbjct: 65 YRDIASSTAYPLYDVLWHAAQAFSAIRVTMPMRRVIIFTSCDNP-----PCDDNEKHRIR 119
Query: 196 MQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADM---IG-LEGDDLALFMPSAGQKLED 251
+Q A D+ + + ++ L E + FY D+ G ++ DD L+D
Sbjct: 120 VQ-ATSYSDIDLQLLVVGLG---ENWNHDLFYKDLEMQFGKIDADDYNRI------SLKD 169
Query: 252 MKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERS 311
+ +Q++ R + ++ + + I+++ +L T + +N PL +
Sbjct: 170 IVEQVK---LPSRNMAKLPLRLGENVVIDVSLRSLSVKTSYLKKENISKESNIPLSSHTY 226
Query: 312 FICADTG---------------ALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRL 356
I + ++ +++Q + E I F+ +E+ + + +
Sbjct: 227 HIVDENDDIEEVENEESQQASLPILDIDIQKYQTFGDERINFTPEEVRCLCTTREIGIDI 286
Query: 357 HGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN-- 414
K +SY YH P FV P + +F AL N + N
Sbjct: 287 IYIKHISYHPLYHVETP-YFVIPGKSYRKDNKLLFGALLNKCEAKNLMIICAVTIRKNFG 345
Query: 415 PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEE-----LHSDTDAVPRASDDE 469
L ++ V++GG ++ +P+ ++++ + E + D + P +
Sbjct: 346 TSLYTMIPN---VKSGG------FYLYKIPFKENVQNMSEYFPEYIFDDNENKPPIVPNG 396
Query: 470 VKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMAR- 528
V+ ++K++ + +++ F+NP +Q + +++ALAL+ + + D+T+P+ + M +
Sbjct: 397 VELLEQIIKKLSI-EYNPKLFSNPEVQDQHQIIEALALDLEKPEPLPDDTLPNTDKMYKL 455
Query: 529 -PGVVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAA--TENAAKECANYDWADLADKG 585
++ ++ + D D+ + K ++++ K + +EN +E G
Sbjct: 456 VNDLLDEYDKVFMKKTDDISDDPPETKHKKSNKVMKPSDFSENKIQEYLR--------TG 507
Query: 586 KLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
++ TV +LK L L +G+K+ LI+RI H
Sbjct: 508 QIATFTVSQLKHMLETLGLKLSGKKDELINRIEKHF 543
>gi|323335992|gb|EGA77268.1| Yku70p [Saccharomyces cerevisiae Vin13]
Length = 537
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 156/374 (41%), Gaps = 41/374 (10%)
Query: 161 GSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAK-DAQDLGISIELLPLSPPDE 219
G + ++KR+ LFT+ D P A++ R ++R D D ++ + D+
Sbjct: 159 GQKQLSNKRVFLFTDIDKP-----QEAQDIDERARLRRLTIDLFDNKVNFATFFIGYADK 213
Query: 220 EFKVSHFYADMIGL-------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFI 272
F + FY+D++ L G D PS K D K ++ R+ K+ VKRI F
Sbjct: 214 PFD-NEFYSDILQLGSHTNENTGLDSEFDGPST--KPIDAK-YIKSRILRKKEVKRIMFQ 269
Query: 273 IANGLSIELN---------TYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQE 323
L + N Y + V + + ++R F+ G +
Sbjct: 270 CPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPIXGEDVTG 329
Query: 324 PAKRFQPYKGENIKFSVQELSEIKRVST---GHLRLHGFKPLS-YLKDYHNLRPSTFVFP 379
+ PY +I S + + T L++ GF+ S + ++N+ S+F+ P
Sbjct: 330 KTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVP 389
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPG 437
+ + GS +L + + + ++ A+ + SN P L L V+ + G
Sbjct: 390 DEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS--VKDYNE----G 443
Query: 438 MHMIYLPYSDDIRPVEELHSDTDAVPRASD-DEVKKAA-ALMKRIDLKD-FSVCQFANPS 494
++ +P+ D+IR L S D D D +KK ++M +L+D ++ F NP
Sbjct: 444 FYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPL 503
Query: 495 LQRHYAVLQALALE 508
LQ+HY VL L+
Sbjct: 504 LQKHYKVLHDYLLQ 517
>gi|398018733|ref|XP_003862531.1| KU70 protein, putative [Leishmania donovani]
gi|312064869|gb|ADQ27498.1| Ku-70-like protein [Leishmania donovani]
gi|322500761|emb|CBZ35838.1| KU70 protein, putative [Leishmania donovani]
Length = 967
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 142/367 (38%), Gaps = 77/367 (20%)
Query: 328 FQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPS- 380
+ P E + F+ +E + V+ GF L + +K H +R S+F+
Sbjct: 599 YAPVGKERVYFTSEERKRMVEVAATGTE-PGFTVLLFKDLVDAVKREHVVRRSSFLHSCV 657
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV-----RAGGQV 433
+ S +F+ R + + A+A Y + + PRLVALV ++ R V
Sbjct: 658 QRGGAHSHRLFVLFVRRLRAKQKVAIAQYCSSTTTAPRLVALVPSPDLTAHPEKRDQVPV 717
Query: 434 EPPGMHMIYLPYSDDIRPVEELHSDT----DAVPRASDDEVKKAAALMKRIDLKDFSVC- 488
+ G++++ LPY++++R V EL + T A P +D V + + + +V
Sbjct: 718 DGMGLYVVPLPYAEELRAVPELRTCTRVSKHATPVLADSSVDPTHLELAKQVVSALTVSY 777
Query: 489 ---QFANPSLQRHYAVLQALALE-----------------------------EDDMPEIK 516
NP+LQR Y LQ LA + + P+
Sbjct: 778 QVDAVLNPALQRQYRKLQELARQFFPLADNPLHPAGGTALAKAGEEGPSTDGAEKTPQEL 837
Query: 517 DETVPDEEGMARPGVVKAVEEFKLSVYGDNYDE-----EGDVKVSEASRKRKA------- 564
D T+PD EGM R + F V G +Y+ + V S R R +
Sbjct: 838 DNTLPDYEGMQR--FAALFQSFNKEVLGKDYNAFLYCPQPRVAGSATRRPRDSAAGAGAM 895
Query: 565 -----ATENAAKECANYDWADL----ADKGKLKEMTVQELKLYLMAHNLSTTG--RKETL 613
+A ++ N +L A + + + +LK YL N+S+ G RK L
Sbjct: 896 EAAGPTAASAEEDACNVSIEELIRRAAAENAWDGLIIPQLKEYLATANVSSGGARRKADL 955
Query: 614 ISRILTH 620
I + H
Sbjct: 956 IELVKQH 962
>gi|146331688|gb|ABQ22350.1| ATP-dependent DNA helicase 2 subunit 1-like protein [Callithrix
jacchus]
Length = 164
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 465 ASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEE 524
A+ ++V K A+++++ + F NP LQ+H+ L+ALAL+ + + D T+P E
Sbjct: 9 ATPEQVDKMKAIVEKLRF-TYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTLPKVE 67
Query: 525 GM-ARPGVVKAVEEFKLSVYGDNYDEEGDVKV----SEASRKRKAATENAAKECANYDWA 579
M R G + V+EFK VY +Y+ EG V +E S ++ E + +E +
Sbjct: 68 AMNKRLGSL--VDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKTH--- 122
Query: 580 DLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
KG L + TV LK A+ L + +K+ L+ + H
Sbjct: 123 --ISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKH 161
>gi|146093043|ref|XP_001466633.1| putative KU70 protein [Leishmania infantum JPCM5]
gi|134070996|emb|CAM69673.1| putative KU70 protein [Leishmania infantum JPCM5]
Length = 967
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 141/365 (38%), Gaps = 77/365 (21%)
Query: 330 PYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPS-DK 382
P E + F+ +E + V+ GF L + +K H +R S+F+ +
Sbjct: 601 PVGKERVYFTSEERKRMVEVAATGTE-PGFTVLLFKDLVDAVKREHVVRRSSFLHSCVQR 659
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSN--PRLVALVAQDEIV-----RAGGQVEP 435
S +F+ R + + A+A Y + + PRLVALV ++ R V+
Sbjct: 660 GGAHSHRLFVLFVRRLRAKQKVAIAQYCSSTTTAPRLVALVPSPDLTAHPEKRDQVPVDG 719
Query: 436 PGMHMIYLPYSDDIRPVEELHSDT----DAVPRASDDEVKKAAALMKRIDLKDFSVC--- 488
G++++ LPY++++R V EL + T A P +D V + + + +V
Sbjct: 720 MGLYVVPLPYAEELRAVPELRTCTRVSKHATPVLADSSVDPTHLELAKQVVSALTVSYQV 779
Query: 489 -QFANPSLQRHYAVLQALALE-----------------------------EDDMPEIKDE 518
NP+LQR Y LQ LA + + P+ D
Sbjct: 780 DAVLNPALQRQYRKLQELARQFFPLADNPLHPAGGTALAKAGEEGPSTDGAEKTPQELDN 839
Query: 519 TVPDEEGMARPGVVKAVEEFKLSVYGDNYDE-----EGDVKVSEASRKRKA--------- 564
T+PD EGM R + F V G +Y+ + V S R R +
Sbjct: 840 TLPDYEGMQR--FAALFQSFNKEVLGKDYNAFLYCPQPRVAGSATRRPRDSAAGAGAMEA 897
Query: 565 ---ATENAAKECANYDWADL----ADKGKLKEMTVQELKLYLMAHNLSTTG--RKETLIS 615
+A ++ N +L A + + + +LK YL N+S+ G RK LI
Sbjct: 898 AGPTAASAEEDACNVSIEELIRRAAAENAWDGLIIPQLKEYLATANVSSGGARRKADLIE 957
Query: 616 RILTH 620
+ H
Sbjct: 958 LVKQH 962
>gi|156837026|ref|XP_001642549.1| hypothetical protein Kpol_1068p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113092|gb|EDO14691.1| hypothetical protein Kpol_1068p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 514
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 167 DKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHF 226
+K++ LFT+ D P + A K + R D + I+ ++ ++ F S F
Sbjct: 180 NKKVFLFTDNDSPTEASDKAGKARLRRL----FDDNNENFITFVPFFINRENKPFD-SSF 234
Query: 227 YADMIGLEGDDLALFMPSAGQKLE--------DMKDQLRKRMFSKRIVKRISF---IIAN 275
Y+D+ L + PS+ ++E ++ R+ K+ +KR+ F +I N
Sbjct: 235 YSDIFKLGNSE----NPSSDYEIEFDGPSTRPISASYIKSRVLRKQEIKRVLFQCSLILN 290
Query: 276 ---GLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEPAKRFQ 329
++ + Y+++ G+ + + ++R + T ++E +
Sbjct: 291 KEMNFTVAIKGYSIVSQEKVGSRYKMVYEHEDVRKEAFSKRKILNCITAEEVKEGLTKVF 350
Query: 330 PYKGENIKFSVQELSEIKRV---STGHLRLHGFKPLSY-LKDYHNLRPSTFVFPSDKEVV 385
PY NI+ S +++ ++K L+L GF+ L L Y+N+ +FV P + ++
Sbjct: 351 PYGDLNIELSEEDIKKVKEAYLEDGPFLKLLGFRSLEISLHYYNNITKPSFVVPDESKID 410
Query: 386 GSTCIFIALHRSMLRLNRFAVAF---YGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIY 442
GS + +L R+M + N+ AV + GN S+P L L A + A E G +
Sbjct: 411 GSIRMLASLFRTMRKKNKVAVLWGKLKGN-SHPGLWVLSASN----ASDPNE--GFFLYR 463
Query: 443 LPYSDDIR 450
+P+ D+IR
Sbjct: 464 IPFLDEIR 471
>gi|209945130|gb|ACI96796.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRSLXXGD--GFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|209945158|gb|ACI96810.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 335 NIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIAL 394
+++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 313 DLRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRAL 372
Query: 395 HRSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPY 445
L ++ A+ + S PR VALV +D+ R+ + G ++YLP
Sbjct: 373 WERCLVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPE 430
Query: 446 SDDIR 450
+ IR
Sbjct: 431 AKHIR 435
>gi|389593873|ref|XP_003722185.1| putative KU70 protein [Leishmania major strain Friedlin]
gi|321438683|emb|CBZ12442.1| putative KU70 protein [Leishmania major strain Friedlin]
Length = 925
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 141/369 (38%), Gaps = 80/369 (21%)
Query: 328 FQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSY------LKDYHNLRPSTFVFPS- 380
+ P E + F+ +E I V+ GF L + +K H +R S+F+
Sbjct: 558 YAPIGKERVYFTSEERKRIVEVAATGTE-PGFTVLLFKDLVDAVKREHVVRRSSFLHSCV 616
Query: 381 DKEVVGSTCIFIALHRSMLRLNRFAVAFYGNP--SNPRLVALVAQDEIV-----RAGGQV 433
+ S +F+ R + + A+A Y + + PRLVALV ++ R V
Sbjct: 617 QRGGAHSHRVFVLFVRRLRAKQKVAIAQYCSSITTAPRLVALVPSPDLTAHPEKRDQVPV 676
Query: 434 EPPGMHMIYLPYSDDIRPVEELHSDT----DAVPRASDDEVKKAAALMKRIDLKDFSVC- 488
+ G++++ LPY++++R V EL + T A P +D V A + + + +V
Sbjct: 677 DGMGLYVVPLPYAEELRAVPELRTCTRVNKHATPVLADSSVDPAHLELAKQLVSALTVSY 736
Query: 489 ---QFANPSLQRHYAVLQALA-----LEEDDM-------------------------PEI 515
NP+LQR Y LQ LA L ++ + P+
Sbjct: 737 QVDAVFNPALQRQYRQLQELARRLFPLADNPLHSGGGTALAKAGEEGPSTDGAAKMAPQE 796
Query: 516 KDETVPDEEGMARPGVVKAVEEFKLSVYGDNYDE-----EGDVKVSEASRKRKAATENAA 570
D +PD EGM + F V G +YD + V S R R +A A
Sbjct: 797 LDSALPDYEGMQS--FAALFQSFNKEVLGKDYDAFRYCPQPRVAGSVTRRPRDSAA--GA 852
Query: 571 KECANYDWADLADKG----------------KLKEMTVQELKLYLMAHNLSTTG--RKET 612
E A A + G + + +LK YL N+S+ G RK
Sbjct: 853 VEAAGPTAASAEEDGGHVPIEQLICRAAAENAWDGLIIPQLKEYLATANVSSGGARRKAD 912
Query: 613 LISRILTHM 621
LI + H
Sbjct: 913 LIELVKQHF 921
>gi|422292694|gb|EKU19996.1| ku p70 dna, partial [Nannochloropsis gaditana CCMP526]
Length = 118
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 440 MIYLPYSDDIRPVEELHSDT-DAVPRASDDEVKKAAALMKRIDLKDFSVCQ-FANPSLQR 497
MI LP+ DD+R +E H ++ A+P S D+ + A +++ R+ ++ Q ++NP LQ+
Sbjct: 1 MIVLPFLDDLRAIESPHLESLPALP--SMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQK 58
Query: 498 HYAVLQALALEEDDM---PEIKDETVPDE-EGMARPG 530
YA LQALALE+ ++ D T PDE E + R G
Sbjct: 59 FYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTG 95
>gi|68492034|ref|XP_710203.1| potential Ku DNA binding protein subunit [Candida albicans SC5314]
gi|46431359|gb|EAK90937.1| potential Ku DNA binding protein subunit [Candida albicans SC5314]
Length = 811
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 46/199 (23%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPS-DKEVVGSTCI---------FIALHRSMLRLN 402
+L+L GF+ +S+ ++ FV P D ++ S F +L+RS ++LN
Sbjct: 491 YLKLIGFRDISHFSPVYSCGAPIFVTPDVDNGMISSAVTGGFTNSFKTFASLYRSCVKLN 550
Query: 403 RFAVAFYGNPSN--PRLVALVA---------------QDEIVRAGGQVE-PPGMHMIYLP 444
++A+ SN PRL AL DE+ Q E P G +I LP
Sbjct: 551 QYAIVLGCTRSNSRPRLYALYPTHTTNSSKNPLPKNLDDEVDNDDNQDEFPQGFLLIKLP 610
Query: 445 YSDDIRPV----------EELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPS 494
+ +D+R + EE+H+D D + L+ + +L + +F N S
Sbjct: 611 WLEDVRALPGEYIKNTQREEIHND--------DTLIDNFKQLLPKFELSHYDPREFPNAS 662
Query: 495 LQRHYAVLQALALEEDDMP 513
L Y V++ L+ + P
Sbjct: 663 LNYFYKVIKHEILQMELKP 681
>gi|413953853|gb|AFW86502.1| hypothetical protein ZEAMMB73_849225 [Zea mays]
Length = 761
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 194 TTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMI 231
+T + +DAQDLG+SIELLPLS PDE+F +S FYA ++
Sbjct: 718 STYKLEEDAQDLGLSIELLPLSHPDEQFDMSPFYAAIV 755
>gi|294658464|ref|XP_460808.2| DEHA2F10208p [Debaryomyces hansenii CBS767]
gi|202953152|emb|CAG89149.2| DEHA2F10208p [Debaryomyces hansenii CBS767]
Length = 738
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVV----------GSTCIFIALHRSMLRLN 402
+L+L GF+ LS + ++N FV P + + S F +L++S ++L
Sbjct: 433 YLKLLGFRSLSTYQPHYNSSAPIFVTPDMNDGLKTASAEGGYKNSFKTFSSLYQSCIKLQ 492
Query: 403 RFAVAF--YGNPSNPRLVALVAQDEI-VRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDT 459
++ V F S P L AL G P G +I LP+ DD+R + E
Sbjct: 493 KYGVLFGCLKKNSMPNLYALYPTKATNSNKSGLNFPEGFFLIRLPWLDDVRSLPEYSFLN 552
Query: 460 DA-VPRASDDEVKKAAAL-----MKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMP 513
+ + S + V L + + L+++ F NPS+ Y ++ L+E+ P
Sbjct: 553 NVNLNELSGESVPPEILLNFKHIISQFFLREYRPSDFPNPSINYFYKIINNELLQEELSP 612
Query: 514 EIK 516
E K
Sbjct: 613 ESK 615
>gi|209945156|gb|ACI96809.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 436
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 336 IKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALH 395
++ S+ +L+ ++ + + L GFK S L + ++P+ F++P D+ ++GS +F AL
Sbjct: 314 LRISMDQLNRVRNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALW 373
Query: 396 RSMLRLNRFAVAFY--GNPSNPRLVALV-------AQDEIVRAGGQVEPPGMHMIYLPYS 446
L ++ A+ + PR VALV +D+ R+ + G ++YLP +
Sbjct: 374 ERCLVRDKIAICLFMCKRKXXPRYVALVPVEAPDNGEDKNYRS--LLCGDGFKIVYLPEA 431
Query: 447 DDIR 450
IR
Sbjct: 432 KHIR 435
>gi|238878421|gb|EEQ42059.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 811
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 46/199 (23%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPS-DKEVVGSTCI---------FIALHRSMLRLN 402
+L+L GF+ +S+ ++ FV P D ++ S F +L+RS ++LN
Sbjct: 491 YLKLIGFRDISHFSPVYSCGAPIFVTPDVDNGMISSAVTGGFTNSFKTFASLYRSCVKLN 550
Query: 403 RFAVAFYGNPSN--PRLVALVA---------------QDEIVRAGGQVE-PPGMHMIYLP 444
++A+ SN P L AL DE+ Q E P G +I LP
Sbjct: 551 QYAIVLGCTRSNSRPHLYALYPTQTTNSSKNPLPKNLDDEVDNDDNQDEFPKGFLLIKLP 610
Query: 445 YSDDIRPV----------EELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPS 494
+ +D+R + EE+H+D D + L+ + +L + +F N S
Sbjct: 611 WLEDVRALPGEYIKNTQREEIHND--------DTLIDNFKQLLPKFELSHYDPREFPNAS 662
Query: 495 LQRHYAVLQALALEEDDMP 513
L Y V++ L+ + P
Sbjct: 663 LNYFYKVIKHEILQMELKP 681
>gi|332028750|gb|EGI68781.1| ATP-dependent DNA helicase 2 subunit 1 [Acromyrmex echinatior]
Length = 509
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 112/531 (21%), Positives = 216/531 (40%), Gaps = 66/531 (12%)
Query: 13 DEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQI 72
DEE D++ Q + +E ++LVD + KMF + +D+ T+ Q L+ ++
Sbjct: 4 DEEVDSQASQWY-GVREATLFLVDCTEKMFMHSSDIDDKK-ITYIEKFFKLYKQILRQKL 61
Query: 73 INRLYDEVAICFFNTRKK------KNLQDLNAVFVFNVAEREQLDRPTARFIKEFDHIEE 126
+ D + + F T K N+Q L + V + + +Q+ R + + I
Sbjct: 62 AWSMQDWMGVVLFGTEKSDSNSPWTNIQTLQELRVVTLDDLQQI-----RKLSKLQSINV 116
Query: 127 SFEKEIGSQYGIVSGSRENS--LYNALWVAQGLLRKGSSKTADKRILLFTNEDDPFGSIK 184
++ +I + G S +N+ L +AL A + K + +RI+L T + +
Sbjct: 117 AYSLKINMK-GYESMKLKNNALLLDALTYATDIFLKIKTVLTKRRIVLITCYNPDYS--- 172
Query: 185 GAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLEGD-DLALFMP 243
+D +AK ++L I++ ++ L + + FY D+ L ++ ++
Sbjct: 173 ----DDEKHRIRAKAKSLKELNINLHVIDLR---NNWPLDEFYKDLEMLSRKMEIGVYRR 225
Query: 244 SAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALIRPTVPGAITWLDSVTN 303
++ L D+ Q++ SK I R+SF I +G+ I+L L R L TN
Sbjct: 226 TS---LVDLVQQIKAP--SKNIA-RLSFQICDGVEIDLAVRTLGRKRRCLQTKPLSKATN 279
Query: 304 HPLKTERSFIC--------------ADTGALMQEPA--KRFQPYKGENIKFSVQELSEIK 347
L F +D ++ E + + G+ ++F+ +EL IK
Sbjct: 280 QVLSRSTYFKDINFSNDEEDSDNEESDLPFMIPEEVNLETKELIGGKKLRFTRKELLRIK 339
Query: 348 RVSTGHLRLHGFKPL-SYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA--LHRSMLRLNRF 404
+ +++ G +P+ S L YH ++ FV +F + L++ +
Sbjct: 340 HLYPPAIKIIGVRPIPSDLFRYH-VKRKYFVRADYGSTRKDNLLFFSALLNKCATKSKMI 398
Query: 405 AVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEE--LHSDTDAV 462
AF + L Q + E G ++ + + I E LH DT
Sbjct: 399 VCAF--------TMRLNTQTNLCYMIPNAELGGFYLSKVAFQGSIGDKSEALLHYDTQN- 449
Query: 463 PRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMP 513
SD EV + R+D+ ++ F + L+ +++ LAL+++ P
Sbjct: 450 -SVSDKEVALWKKTIDRLDM-NYHPYNFRSYKLECQIQIVEKLALDKEPGP 498
>gi|68486045|ref|XP_713039.1| potential Ku DNA binding protein subunit [Candida albicans SC5314]
gi|46434507|gb|EAK93914.1| potential Ku DNA binding protein subunit [Candida albicans SC5314]
Length = 811
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 46/199 (23%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPS-DKEVVGSTCI---------FIALHRSMLRLN 402
+L+L GF+ +S+ ++ FV P D ++ S F +L+RS ++LN
Sbjct: 491 YLKLIGFRDISHFSPVYSCGAPIFVTPDVDNGMISSAVTGGFTNSFKTFASLYRSCVKLN 550
Query: 403 RFAVAFYGNPSN--PRLVALVA---------------QDEIVRAGGQVE-PPGMHMIYLP 444
++A+ SN P L AL DE+ Q E P G +I LP
Sbjct: 551 QYAIVLGCTRSNSRPHLYALYPTQTTNSSKNPLPKNLDDEVDNDDNQDEFPQGFLLIKLP 610
Query: 445 YSDDIRPV----------EELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPS 494
+ +D+R + EE+H+D D + L+ + +L + +F N S
Sbjct: 611 WLEDVRALPGEYIKNTQREEIHND--------DTLIDNFKQLLPKFELSHYDPREFPNAS 662
Query: 495 LQRHYAVLQALALEEDDMP 513
L Y V++ L+ + P
Sbjct: 663 LNYFYKVIKHEILQMELKP 681
>gi|68486110|ref|XP_713005.1| potential Ku DNA binding protein subunit [Candida albicans SC5314]
gi|46434468|gb|EAK93876.1| potential Ku DNA binding protein subunit [Candida albicans SC5314]
Length = 811
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 46/199 (23%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPS-DKEVVGSTCI---------FIALHRSMLRLN 402
+L+L GF+ +S+ ++ FV P D ++ S F +L+RS ++LN
Sbjct: 491 YLKLIGFRDISHFSPVYSCGAPIFVTPDVDNGMISSAVTGGFTNSFKTFASLYRSCVKLN 550
Query: 403 RFAVAFYGNPSN--PRLVALVA---------------QDEIVRAGGQVE-PPGMHMIYLP 444
++A+ SN P L AL DE+ Q E P G +I LP
Sbjct: 551 QYAIVLGCTRSNSRPHLYALYPTQTTNSSKNPLPKNLDDEVDNDDNQDEFPQGFLLIKLP 610
Query: 445 YSDDIRPV----------EELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPS 494
+ +D+R + EE+H+D D + L+ + +L + +F N S
Sbjct: 611 WLEDVRALPGEYIKNTQREEIHND--------DTLIDNFKQLLPKFELSHYDPREFPNAS 662
Query: 495 LQRHYAVLQALALEEDDMP 513
L Y V++ L+ + P
Sbjct: 663 LNYFYKVIKHEILQMELKP 681
>gi|193083083|ref|NP_001122374.1| zinc finger protein ZF(C2H2)-102 [Ciona intestinalis]
gi|93003104|tpd|FAA00135.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 710
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 393 ALHRSMLRLNRFAVA--FYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIR 450
AL +M++ N AVA Y SNP+LVAL+ + V+ G + M+ LP+++D+R
Sbjct: 389 ALCTAMVKQNLCAVACHVYRKGSNPKLVALLPK---VKLGSHY----LVMVSLPFAEDVR 441
Query: 451 PV--EELHSDTDAVPRASDDEVKKAAALMKRIDLKD-----FSVCQFANPSLQRHYAVL- 502
P+ E L S + P S+++++ A L+ +D F + NP+ QR + L
Sbjct: 442 PLSFESLFSGKNKQP--SEEQLQLAEDLISSMDFTQSEDGIFKAKEKMNPTFQRTFQCLD 499
Query: 503 QALALEEDDMPEIKDETVPDEEGMARPGVVKAV 535
L + +P++ ++ + D ++ P V+ +
Sbjct: 500 HRLKHPDSKLPDL-NQLINDSVSISHPTSVETL 531
>gi|402584244|gb|EJW78186.1| hypothetical protein WUBG_10904, partial [Wuchereria bancrofti]
Length = 230
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 3 LDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVS 62
+D DD F D DE + + K+ ++LVDASPKMF +D + F A+
Sbjct: 2 MDEDDEFTDGDEFEELSASALADGGKKCTIFLVDASPKMFEKY-KNDDSESDCSFRRALK 60
Query: 63 CIAQSLKTQIINRLYDEVAIC-FFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFIKEF 121
+ + + + + E C NT+ K ++ V+V ++++ +A IKE
Sbjct: 61 IVRLQMVNKAVTSTFGEYTCCILLNTQIKS--HSIDHVYVM-----QEVEEVSAERIKEL 113
Query: 122 DHIEES-------FEKEIGSQYGIVSGSRENSLYN-ALWVAQGLLRKGSSKT---ADKRI 170
D + S K I S + + G + Y+ AL++ +++ +S+T + +
Sbjct: 114 DQLLRSGILLDSLAIKNILSAFKAIYGGHGHCDYSEALFLC---IKRMTSRTPYFRKRTV 170
Query: 171 LLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEF 221
L TNE + FG A N + A D + + PL ++ F
Sbjct: 171 YLLTNETNLFG-----ANNQHRVAACKNADDLRSHNTEFLIFPLITENDTF 216
>gi|195656901|gb|ACG47918.1| hypothetical protein [Zea mays]
Length = 75
Score = 47.0 bits (110), Expect = 0.032, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 1 MELDPDDVFRDDDEESDNEFYQEHEATKEYVVYLVDASPKMFSTT 45
M+LDP+ +FRDD +E ++ QE EA KE VVYLVDASPKM + T
Sbjct: 1 MDLDPEGIFRDDSDEDEDSV-QEREANKEMVVYLVDASPKMLNVT 44
>gi|312384840|gb|EFR29472.1| hypothetical protein AND_01474 [Anopheles darlingi]
Length = 314
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 40/247 (16%)
Query: 13 DEESDNEFYQEHEATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQI 72
DEE DNE + + +V ++D + +MF +D F + ++ +
Sbjct: 13 DEEDDNEEFVY--GGRSALVLVIDCAEEMFV-------DSDNGKFKETLDIADAVMRNMV 63
Query: 73 INRLYDEVAICFFNTRKKKN---------LQDLNAVFVFNVAERE-----QLDRPTARFI 118
+ D VA+ +N + + Q + + VA R+ LD + I
Sbjct: 64 TSNEKDLVALVLYNVQHNRTPPEDDDDDGKQSSSGI----VAPRQCAIFLHLDTVSVEMI 119
Query: 119 KEFDHIEESFEKE-IGSQYGIVSGSRENSLYNALWVAQGLLRKGSSKTADKRILLFTNED 177
K+ + +S + E +YG SG+ SL N LW+ + K I LFT D
Sbjct: 120 KKVRRLRDSDDFEGFEHKYGHTSGT---SLANVLWLCTRMFTHCGYKLEHSTIFLFTMND 176
Query: 178 DPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIELLPLSPPDEEFKVSHFYADMIGLE-GD 236
P + + +T +A+D I+I LLP+ E F S FY + + G+
Sbjct: 177 QPHTNNSSEHQQSLT-----KARDLLQKDITIMLLPMV---ESFDCSKFYTEFLCTALGE 228
Query: 237 DLALFMP 243
D F P
Sbjct: 229 DEEDFHP 235
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 341 QELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIALHRSMLR 400
+E++ +K++ T +RL GFKP S + +++R S FV+P + + GST + L+ L
Sbjct: 237 EEMNLMKQILTPGIRLLGFKPASIVTITNHVRSSLFVYPDEAHINGSTVLLRTLYEKCLE 296
Query: 401 LNRFA 405
N+ A
Sbjct: 297 RNQVA 301
>gi|443717141|gb|ELU08335.1| hypothetical protein CAPTEDRAFT_163248 [Capitella teleta]
Length = 723
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 31/208 (14%)
Query: 331 YKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCI 390
Y + FS + +K S ++ GF ++ ++ + +T+V ++K +
Sbjct: 303 YGSTLVPFSADDKEAMKYRSEKCFKVFGFTKSENVRTHYKMGDATWVCVAEKSDEAAAVA 362
Query: 391 FIALHRSMLRLNRFAVA--FYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIY--LPYS 446
A ++ N A+ Y N R+ ALV Q +E +IY LP++
Sbjct: 363 LSAFINALYETNCVAIVRRVYNNNGAVRIGALVPQ---------IEAENECLIYNELPFA 413
Query: 447 DDIR-------PVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSV---CQFA----- 491
+D+R PV E +S + +DD++ L+ +DL CQ
Sbjct: 414 EDVRNYSFGSLPVSETNS-ANQRQAPTDDQLSLMDELIDNMDLSKVETDDDCQVLDPEVT 472
Query: 492 -NPSLQRHYAVLQALALEEDD-MPEIKD 517
NP LQR + LQ AL DD +P++ +
Sbjct: 473 FNPYLQRLFQCLQHRALNPDDPLPDLSE 500
>gi|260943904|ref|XP_002616250.1| hypothetical protein CLUG_03491 [Clavispora lusitaniae ATCC 42720]
gi|238849899|gb|EEQ39363.1| hypothetical protein CLUG_03491 [Clavispora lusitaniae ATCC 42720]
Length = 705
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 78/194 (40%), Gaps = 37/194 (19%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTC----------IFIALHRSMLRLN 402
+L+L F+ +S + N++P F+ + + ST F +L++S LRL
Sbjct: 401 YLKLLCFRDISKFQHLFNIKPPVFITADSSDGMNSTSKEGGYTNSFNTFRSLYQSCLRLQ 460
Query: 403 RFAVAF--YGNPSNPRLVALVAQDEIVRAGGQVE------PPGMHMIYLPYSDDIRPVEE 454
R+AV F S+P L AL + G E P G +I LP+ +IR + +
Sbjct: 461 RYAVLFGCVKRNSSPSLYALYPTNT---EGSSTEIKDKQFPDGFLLITLPWLSEIRSLPD 517
Query: 455 ----------LHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQA 504
L VP K L K D D SV NP L Y ++
Sbjct: 518 YMLTEHHRYFLPETESVVPPELASLCSKLMGLCKVDDSYDPSV--HPNPVLNYFYKTIKQ 575
Query: 505 LALEEDDMPEIKDE 518
AL+ D IKDE
Sbjct: 576 EALQID----IKDE 585
>gi|401415912|ref|XP_003872451.1| putative KU70 protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488675|emb|CBZ23922.1| putative KU70 protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 948
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 48/204 (23%)
Query: 390 IFIALHRSMLRLNRFAVAFY--GNPSNPRLVALVAQDEI-----VRAGGQVEPPGMHMIY 442
+F+ R + + A+A Y + PRLVALV ++ +R V+ G++++
Sbjct: 656 LFVLFVRRLRAKQKVAIAQYCSSTATAPRLVALVPSPDLTAHPEMRDQVPVDGMGLYVVP 715
Query: 443 LPYSDDIRPVEELHS----DTDAVPRASDDEV-----KKAAALMKRIDLKDFSVCQFANP 493
LPY++++R V EL + D A P +D V + A L+ + + + + NP
Sbjct: 716 LPYAEELRAVPELCTCTLVDKHATPVLADSSVDPTHLELAKQLVNALTV-SYQIDAVFNP 774
Query: 494 SLQRHYAVLQALALE--------------------EDDMPEIK---------DETVPDEE 524
+LQR Y LQ LA + E++ P D T+PD E
Sbjct: 775 ALQRQYRKLQDLARQLFPLADRPLHPGGGTAAAKAEEEGPSTDDAEKPLQELDNTLPDYE 834
Query: 525 GMARPGVVKAVEEFKLSVYGDNYD 548
GM + F V G +Y+
Sbjct: 835 GMK--SFAALFQSFNKEVLGKDYN 856
>gi|448089620|ref|XP_004196856.1| Piso0_004084 [Millerozyma farinosa CBS 7064]
gi|448093923|ref|XP_004197887.1| Piso0_004084 [Millerozyma farinosa CBS 7064]
gi|359378278|emb|CCE84537.1| Piso0_004084 [Millerozyma farinosa CBS 7064]
gi|359379309|emb|CCE83506.1| Piso0_004084 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 353 HLRLHGFKPLSYLKDYHNLRPSTFVFP----------SDKEVVGSTCIFIALHRSMLRLN 402
+L+L GF+ L + + FV P S+ S F +L++S +L
Sbjct: 461 YLKLLGFRNLLTFDNSYVSGAPIFVTPDLNNGFSSITSEGGFKNSFRTFSSLYQSCKKLQ 520
Query: 403 RFAVAFYGNPSN--PRLVAL----VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPV-EEL 455
++AV F N P L AL V I++ P G +I P+ DDIR + E+L
Sbjct: 521 KYAVLFGCTKRNSSPSLYALYPTRVKNSTILKDNF---PEGFFLIRTPWLDDIRCLPEDL 577
Query: 456 HSDTDAVPRA-SDDEV------KKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQA 504
TD++ RA +DE+ ++ +L+ + +++++ F NPSL Y V++A
Sbjct: 578 M--TDSIYRALCEDELAYTYLKQEFKSLLSQFFIRNYTPRDFPNPSLNYFYKVIKA 631
>gi|340052980|emb|CCC47266.1| putative KU70 protein, fragment [Trypanosoma vivax Y486]
Length = 668
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 31/142 (21%)
Query: 386 GSTCIFIALHRSMLRLNRFAVAFY----GNPSNPRLVALVAQ-----------------D 424
GS +F+ L R +++ + AVA Y G P PRLVALV +
Sbjct: 393 GSLRLFVHLTRVLIQQQKVAVAQYVARRGVP--PRLVALVPSPSFSSLGQGCYTNCDRSN 450
Query: 425 EIVRAGGQVEPPGMHMIYLPYSDDIRPVEEL---HSDTDAVPRASDDEVKKAAALMKRID 481
V V+ G++++ LPY+DDIRP +L S+T+ P+ D E+ K M +
Sbjct: 451 VCVAVNAPVQGVGLYVVPLPYADDIRPTPQLPCFTSETEPTPQ--DVELAKQ---MLSVL 505
Query: 482 LKDFSVCQFANPSLQRHYAVLQ 503
F + NP+L+ +Q
Sbjct: 506 TTPFDISAVPNPALELRCKFIQ 527
>gi|45198961|ref|NP_985990.1| AFR443Cp [Ashbya gossypii ATCC 10895]
gi|44985036|gb|AAS53814.1| AFR443Cp [Ashbya gossypii ATCC 10895]
gi|374109219|gb|AEY98125.1| FAFR443Cp [Ashbya gossypii FDAG1]
Length = 576
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 146/377 (38%), Gaps = 41/377 (10%)
Query: 167 DKRILLFTNEDDPFGSIKGAAKNDM-TRTTMQRA-KDAQDLGISIELLPLSPPDEEFKVS 224
+K+I LFT+ D P K + +RT +++ D D I+ + F S
Sbjct: 164 NKKIFLFTDNDSP------PEKESLGSRTRLRKVVDDLNDYYINFSTFFIGTEQRPFDES 217
Query: 225 HFYADMIGL------EGDDLALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIA---- 274
FY+D++ L EG L+ + + + +R R+ K+ V+R+ +
Sbjct: 218 -FYSDILKLGAQVAAEGSSKPLYDGPSTKPIS--VSYIRSRVLRKKEVRRLRYSCPLFLN 274
Query: 275 --NGLSIELNTYALIRPTVPGA---ITWLDSVTNHPLKTERSFICADTGALMQEP-AKRF 328
GL + + YA PGA + + + R ++ DTG E K +
Sbjct: 275 EEQGLVVSVKGYAATTYERPGARYRMVYQHEDVQREAFSHRRYLDPDTGEEATEDLCKVY 334
Query: 329 QPYKGENIKFSVQE---LSEIKRVSTGHLRLHGFK-PLSYLKDYHNLRPSTFVFPSDKEV 384
Q E + S LR+ G + ++ L Y+N+ TF+ P D
Sbjct: 335 QIGDDCLDLPDDLENLITNFAAPTSDSFLRMLGSRTAVAVLPYYNNIHHVTFLVPDDSVY 394
Query: 385 VGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLP 444
GS + +LHR+ LR ++ AV YG R +L A + A + + LP
Sbjct: 395 AGSAAVLASLHRT-LRASQRAVVLYG---KLRATSLPALYALAPAAAPLPDAVFILARLP 450
Query: 445 YSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDL----KDFSVCQFANPSLQRHYA 500
+ +++R L ++ AS D + IDL ++ F NP + H+
Sbjct: 451 FQEEVRKFPALSPPQASL--ASPDYAVLQKITSRIIDLLVLSSPYAPADFKNPVIATHFR 508
Query: 501 VLQALALEEDDMPEIKD 517
+L E P D
Sbjct: 509 LLSDHLFETAQDPRTDD 525
>gi|209945140|gb|ACI96801.1| inverted repeat-binding protein [Drosophila melanogaster]
Length = 392
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 239 ALFMPSAGQKLEDMKDQLRKRMFSKRIVKRISFIIANGLSIELNTYALI-RPTVPGAITW 297
A +P A E + D+ K+ F +R + SF + LS+ + Y R P +
Sbjct: 206 AFQVPDAQMLREILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQI 265
Query: 298 LDSVTNHPLKTERSFIC---ADTGALMQEPAKRFQPYKG--------ENIKFSVQELSEI 346
L N ++T+R D G+ E + + G +++ S+ +L+ +
Sbjct: 266 LRR-DNSVVRTKRVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRV 324
Query: 347 KRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVGSTCIFIA 393
+ + + L GFK S L + ++P+ F++P D+ ++GS +F A
Sbjct: 325 RNLHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRA 371
>gi|363752499|ref|XP_003646466.1| hypothetical protein Ecym_4620 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890101|gb|AET39649.1| hypothetical protein Ecym_4620 [Eremothecium cymbalariae
DBVPG#7215]
Length = 597
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 23/228 (10%)
Query: 308 TERSFICADTGALMQEPAKRFQPYKGENIKFSVQELSEIKRVSTGH---LRLHGFKPLSY 364
+ R F A+ G + G NI+F+ ++ ++ + H L L GF+ +
Sbjct: 302 SHRKFYNANDGEAADSRLTKVFDIGGLNIEFTEEQDQKMINSFSEHETFLELIGFRSVDK 361
Query: 365 LKDYHN-LRPSTFVFPSDKEVVGSTCIFIALHRSMLRLNRFAVAF--YGNPSNPRLVALV 421
+ Y+N + S++V P D GS+ L+ SM + + A+ + ++P+L +V
Sbjct: 362 VNFYYNNISTSSYVIPDDNVYEGSSKTLSHLYASMTKKGKAAIVWGKLTRIAHPQLFLMV 421
Query: 422 AQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVEELHSDTDAVPRASDDEVKKAAA-LMKRI 480
A D + Q G +++ LP+ ++IR + +V +KK ++
Sbjct: 422 AMDR--KNTNQ----GFYLVRLPFIEEIRRFPQTLQKNRSVNIQEYALMKKITGNIIAFF 475
Query: 481 DLK-DFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDEEGMA 527
+LK + +F +P L+ Y L L+ +++ D+ GM
Sbjct: 476 NLKSSYRAAEFPSPVLKSFYTTLSDKLLQ---------KSLSDQWGMG 514
>gi|413944535|gb|AFW77184.1| putative AP2/EREBP transcription factor superfamily protein [Zea
mays]
Length = 408
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 22 QEHEATKEYVVYLVDASPKMFS-TTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEV 80
QE EA KE VVYLVDASPKMF+ TT + T + A+ YDE
Sbjct: 96 QEREANKEMVVYLVDASPKMFTPTTTQIREPNKRTRLWLGSFATAEEAALA-----YDEA 150
Query: 81 AICFFNTRKKKNLQDLNAVFVFNVAEREQL 110
A + NL L A V + A ++L
Sbjct: 151 ARRLYGPDAFLNLPHLRASAVSSTAAHQRL 180
>gi|59940640|gb|AAX12841.1| thyroid autoantigen 70kDa [Muntiacus muntjak vaginalis]
Length = 92
Score = 43.1 bits (100), Expect = 0.44, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 59 IAVSCIAQSLKTQIINRLYDEVAICFFNTRKKKNLQDLNAVFVFNVAEREQLDRPTARFI 118
+++ CI +II+ D +A+ F+ T+K KN + ++V ++LD P A+ +
Sbjct: 1 MSIQCIRSVYTNKIISSDRDLLAVVFYGTKKDKNSVNFKNIYVL-----QELDNPGAKRV 55
Query: 119 KEFDHIEESFEKEIGSQY---GIVSGSRENSLYNALWVAQGL 157
+E D F+ + G +Y I GS + SL LWV L
Sbjct: 56 QELD----KFKGQEGKKYFQDQIGHGS-DYSLSEVLWVCANL 92
>gi|171686866|ref|XP_001908374.1| hypothetical protein [Podospora anserina S mat+]
gi|170943394|emb|CAP69047.1| unnamed protein product [Podospora anserina S mat+]
Length = 4961
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 390 IFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDI 449
+++ L R + L F VAF G + RL AL + AGG EPP + IY P ++
Sbjct: 2952 LYVGLQREIAALEAFEVAFTGQKTGIRLKALAEE-----AGGLGEPPAVQSIYRPGGGEL 3006
Query: 450 RPVEELHSDTDAVPRASD 467
R ++ S+ A+D
Sbjct: 3007 RSLQGEFSNVLGALLAND 3024
>gi|238606280|ref|XP_002396675.1| hypothetical protein MPER_03043 [Moniliophthora perniciosa FA553]
gi|215469677|gb|EEB97605.1| hypothetical protein MPER_03043 [Moniliophthora perniciosa FA553]
Length = 176
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 16/145 (11%)
Query: 152 WVAQGLLRKGSSKTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQDLGISIEL 211
WV +R G+ KTA KR+ L T++D P G+ + + D G+++E
Sbjct: 37 WV----IRDGAPKTASKRVFLITDDDSPHA---GSGSKQLITSARTTLTDLTQAGVTVEP 89
Query: 212 LPLSPPDEEFKVSHFYADMI---GLEGDDLALFMPS------AGQKLEDMKDQLRKRMFS 262
+S F V FY+ ++ L D+ PS + +++++ Q+R
Sbjct: 90 FFISTDARPFDVHKFYSSVLQPNTLAEDEDDTEDPSVLPESISISRIDELLAQMRFHEVP 149
Query: 263 KRIVKRISFIIANGLSIELNTYALI 287
KR I + N +I + Y LI
Sbjct: 150 KRAQFSIPLKLGNDFTIGVKGYGLI 174
>gi|225442050|ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis
vinifera]
gi|297742965|emb|CBI35832.3| unnamed protein product [Vitis vinifera]
Length = 438
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 581 LADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHMG 622
+ + G+L+++ V + K+YL + L TG KETLI RI H+G
Sbjct: 96 MIEAGQLEKLKVDQCKVYLRKNGLRLTGNKETLIQRIKEHLG 137
>gi|156371372|ref|XP_001628738.1| predicted protein [Nematostella vectensis]
gi|156215722|gb|EDO36675.1| predicted protein [Nematostella vectensis]
Length = 230
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 26 ATKEYVVYLVDASPKMFSTTCPAEDQTDETHFHIAVSCIAQSLKTQIINRLYDEVAICFF 85
A K+ V ++D P M S+ P ET +++ I ++ ++ DE ++ F
Sbjct: 2 AAKDAVAIILDIGPSM-SSAPPGH----ETSLELSIKAINMIIQRKMFANAKDEFSLILF 56
Query: 86 NTRKKKNLQDLNAVFVFNVAEREQLDRP---TARFIKEFDHIEESFEKEIGSQYGIVSGS 142
T + N + N++ + L P RFI D I + + + S
Sbjct: 57 GTEETSNRLNEECGGYENISVVKDLAPPDLEMLRFIH--DGITPGLFTDKNNNTAMHS-- 112
Query: 143 RENSLYNALWVAQGLLR-KGSSKTADKRILLFTNEDDPFGS 182
+ +A+ VA LLR K K DK+I LFT+ PFG+
Sbjct: 113 -SKPVIDAVVVAMDLLREKTRGKKCDKKIYLFTDLGSPFGN 152
>gi|224074055|ref|XP_002304233.1| predicted protein [Populus trichocarpa]
gi|222841665|gb|EEE79212.1| predicted protein [Populus trichocarpa]
Length = 515
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 579 ADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
D+ + GKL+ + V++ K+YL + L TG+K+TLI RI H
Sbjct: 107 CDVMEAGKLEGLKVEQCKVYLRKNKLRLTGKKDTLIQRIKEH 148
>gi|325193327|emb|CCA27667.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325193515|emb|CCA27822.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 709
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 41/298 (13%)
Query: 238 LALFMPSAGQKL---EDMKDQLRKRMFSKRIVKRISF-----IIANGLSIELNTYALIR- 288
L+L GQ + E++K L KR KR+++ F I + G+ + Y I+
Sbjct: 218 LSLVQAVGGQLVSVEEEIK--LLKRGMKKRVMQVTKFRGDLEIGSFGIPV----YCFIKV 271
Query: 289 --PTVPGAI--TWLDSVTNHPLKTERSFICADTGALMQEPAKRFQPYK--GENIKFSVQE 342
T+P + + L + ++ +R ++ D+ P +R + Y E++ FS +
Sbjct: 272 KMSTLPSLMKESELSQEKHEGVRQDRRYMDPDSPDEEVPPDQRIKAYTYGHESVPFSSAD 331
Query: 343 LSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTF-----VFPSDKEVVGSTCIFIALHRS 397
L K + L+L GF D ++ P+ F VF SD + F L +
Sbjct: 332 LEAFKFHTEKSLKLLGFV------DAKSVHPANFMVNTNVFLSDPTKKNAATCFATLVNA 385
Query: 398 MLRLNRFAVAFYGNPSN--PRLVALVAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVE-- 453
M N+ A+A + N P+++AL+ ++ LP+ +D+R E
Sbjct: 386 MRMKNQVAIARFVPRKNAAPKVIALIPH----IPAKEIPYHAFWSQQLPFEEDLRDFEFP 441
Query: 454 -ELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEED 510
L ++ ++P ++ + +D + + NP L+R Y + A A++ D
Sbjct: 442 SILQDNSKSIPSKEQQQIANSLVDGLSVDDDEINPRTCYNPVLRRFYDSVVARAIDPD 499
>gi|156398255|ref|XP_001638104.1| predicted protein [Nematostella vectensis]
gi|156225222|gb|EDO46041.1| predicted protein [Nematostella vectensis]
Length = 528
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 580 DLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
+L + GKL + V EL YL+ +NLS TG+K+ I RI H
Sbjct: 403 ELIENGKLPSLVVSELDKYLIHYNLSKTGKKKDKIRRITVH 443
>gi|291226568|ref|XP_002733270.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 990
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 575 NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKE 611
+YDW D+ KG+LK +T+ EL YL + L+ G+KE
Sbjct: 805 DYDWLDIIMKGRLKTLTISELNKYLDYNKLTKHGKKE 841
>gi|406601281|emb|CCH47054.1| Repressible acid phosphatase [Wickerhamomyces ciferrii]
Length = 452
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 464 RASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDDMPEIKDETVPDE 523
+ S +E+K +K D + + + + + + Y+ L L E+ D+ ++
Sbjct: 103 KNSSEEIKGPLNFLKYYDFEGLDLSKADDETAKGPYSGLLDLYTHGALFREVYDDIFNEK 162
Query: 524 EGM---ARPG--VVKAVEEFKLSVYGDNYDEEGDVKVSEASRKRKAATENAAKECANYDW 578
EG+ + G +V + + F G++Y+E +++ E + K A + C NYDW
Sbjct: 163 EGVKFFSSNGSRIVASAKSFAQGFLGEDYNESYIIQIEEDNEKLGANSLTPINYCKNYDW 222
Query: 579 ADLADK 584
+ DK
Sbjct: 223 ENGEDK 228
>gi|190345823|gb|EDK37771.2| hypothetical protein PGUG_01869 [Meyerozyma guilliermondii ATCC
6260]
Length = 712
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 27/198 (13%)
Query: 350 STGHLRLHGFKPLSYLKDYHNLRPSTFVFP----------SDKEVVGSTCIFIALHRSML 399
S +L+L GF+ + Y+ V P S S +L+RS +
Sbjct: 406 SPPYLKLLGFRATENFEPYYTSSAPALVMPDFDNGLKAASSKGGFSNSYLTLASLYRSCV 465
Query: 400 RLNRFAVAF--YGNPSNPRLVAL----VAQDEIVRAGGQVEPPGMHMIYLPYSDDIRPVE 453
+L +FAV F S+P L AL ++ + + P G + +P+ DDIR +
Sbjct: 466 KLGQFAVVFGCIKRNSSPSLFALYPTGISMSKRSIPHDKDFPEGFLLARMPWLDDIRSLP 525
Query: 454 ELHSDTDAVPRASDDE------VKKAAALMKRIDLKDFSVCQFANPSLQRHYAV-----L 502
+ + ++ V K ++ L ++ +FANPS+ Y V L
Sbjct: 526 DYLLNDSTFHHEKEESSIPPELVTKFKNVVGSFYLNHYNPGEFANPSVNYFYKVIKHELL 585
Query: 503 QALALEEDDMPEIKDETV 520
Q +E P D+T+
Sbjct: 586 QIALSDESRSPLNNDQTL 603
>gi|153003806|ref|YP_001378131.1| Ku family containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152027379|gb|ABS25147.1| Ku family containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 297
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 26/237 (10%)
Query: 269 ISFIIANGLSIELNTYALIRPTVPGAITWLDSVTNHPLKTERSFICADTGALMQ--EPAK 326
ISF + +SI + Y +P+ + L LK + ++CA G ++ E K
Sbjct: 11 ISFGL---VSIPVRLYPATQPSASISFNLLHGACGSRLKQQ--YVCAREGVKVEREEMVK 65
Query: 327 RFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDKEVVG 386
++ K + F+ +EL + ++T + + F P + + + R + DK G
Sbjct: 66 GYEFAKDRYVTFTQEELRALDELATQTIDIAEFVPAAQVDPVYFDR--AYYLGPDK---G 120
Query: 387 STCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIYLPYS 446
+ L ++ R + A+A Y LV + +D G V M +Y Y+
Sbjct: 121 GGKAYRLLALALERAGKAALARYAARGKQYLVLIRPRD-----GRLV----MQQLY--YA 169
Query: 447 DDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQ 503
D++RP +E+ D DA P+ D EV+ A L+++ F Q+ + R A ++
Sbjct: 170 DEVRPADEVPID-DAQPK--DTEVQLALQLIEQTASDAFRPEQYEDAVKARVQAAIE 223
>gi|254000274|ref|YP_003052337.1| Ku protein [Methylovorus glucosetrophus SIP3-4]
gi|253986953|gb|ACT51810.1| Ku protein [Methylovorus glucosetrophus SIP3-4]
Length = 293
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 326 KRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGF------KPLSYLKDYHNLRPSTFVFP 379
K +Q KGE + + E+ + + +T + + F PL + + Y+ L+P+
Sbjct: 63 KGYQYEKGEYVVLTDAEIRQANKEATQAIDIQAFVKVDEISPLYFEQPYY-LKPAK---- 117
Query: 380 SDKEVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMH 439
G ++ L ++ +R +A + L AL+ D+++
Sbjct: 118 ------GGEKVYALLRETLRTTDRIGIAQIVMRTKQHLAALMVVDQVIV----------- 160
Query: 440 MIYLPYSDDIRPVEELHSDTDAVP--RASDDEVKKAAALMK 478
+ L Y++DIRP EEL + P R SD E+K A AL++
Sbjct: 161 LNMLRYAEDIRPPEELGLPGEDAPKVRVSDKEIKMAHALVE 201
>gi|443624818|ref|ZP_21109278.1| putative Ku70/Ku80 protein [Streptomyces viridochromogenes Tue57]
gi|443341656|gb|ELS55838.1| putative Ku70/Ku80 protein [Streptomyces viridochromogenes Tue57]
Length = 293
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 32/221 (14%)
Query: 323 EPAKRFQPYKGENIKFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYHNLRPSTFVFPSDK 382
E K ++ K I + QEL E+ + + +H F PL+ + D + ++ P D
Sbjct: 44 EIGKGYEWSKDRVIPITDQELRELPLPTAKAVEIHAFVPLASI-DPLQIAEGYYLSP-DG 101
Query: 383 EVVGSTCIFIALHRSMLRLNRFAVAFYGNPSNPRLVALVAQDEIVRAGGQVEPPGMHMIY 442
+V + L +++ R +R A+A + RL L +D ++ +H++
Sbjct: 102 QVAAKP--YKLLLQALSRSSRVAIAKWAVRGRERLGLLRVRDGVI---------CLHVLR 150
Query: 443 LPYSDDIRPVEELHSDTDAVPRASDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHY--- 499
P D+IR EEL V SDDE+ +A L + + P + HY
Sbjct: 151 WP--DEIRSPEELFPPPADV---SDDEIDEAVQL-----IDSMTTDTLEGPEFRDHYTEA 200
Query: 500 ------AVLQALALEEDDMPEIKDETVPDEEGMARPGVVKA 534
A + AL E PE+K V D R V KA
Sbjct: 201 LEQVIEAKREGQALPEAPEPEVKSGQVLDLMATLRESVEKA 241
>gi|255576593|ref|XP_002529187.1| hypothetical protein RCOM_0684740 [Ricinus communis]
gi|223531365|gb|EEF33201.1| hypothetical protein RCOM_0684740 [Ricinus communis]
Length = 504
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 580 DLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTH 620
+L GKL+++ V++ K+YL + L TG K+TLI RI H
Sbjct: 4 NLVAAGKLEKLKVEQCKVYLRKNGLRLTGNKDTLIQRIKEH 44
>gi|449018908|dbj|BAM82310.1| transcription antiterminator protein, probably for organellar
transcription [Cyanidioschyzon merolae strain 10D]
Length = 436
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 575 NYDWADLADKGKLKEMTVQELKLYLMAHNLSTTGRKETLISRILTHM 621
+YDW L +L + +Q L+ Y A+ L +GRK LI R+ H+
Sbjct: 358 DYDWRMLVAMERLDRVPMQALRQYCRAYGLGASGRKVALIERVRQHV 404
>gi|196014368|ref|XP_002117043.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
gi|190580265|gb|EDV20349.1| hypothetical protein TRIADDRAFT_61074 [Trichoplax adhaerens]
Length = 784
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 153/408 (37%), Gaps = 109/408 (26%)
Query: 147 LYNALWVAQGLLRKGSS--KTADKRILLFTNEDDPFGSIKGAAKNDMTRTTMQRAKDAQD 204
+ +++ VA LL+K +S K DKRI+LF++ PF + A ++ + + D+
Sbjct: 151 VLDSIIVAMDLLKKSTSGKKFGDKRIILFSDLGSPFADDQIAGESTLKKILEIVDGDSHS 210
Query: 205 LGISIELLPLSPPDEEFKVSHFYADMIGLEGDDLALFMPSAGQKLEDMKDQLRKRMFSKR 264
L ++ L F KR
Sbjct: 211 LRSALSTLSF----------------------------------------------FQKR 224
Query: 265 IVKRISFI---IANGLSIELNTYALIR-----PTVPGAITWLDSVTNHP----LKTERSF 312
+K + + G +++NTYA I+ P ++ + +N P +K ERS+
Sbjct: 225 SIKMTTVFRGPLEIGSKLKINTYAYIKVRESKPESWKKLSAISEASNQPGDMKVKIERSY 284
Query: 313 ICADTGALMQEPAKRFQPYK-GENI--KFSVQELSEIKRVSTGHLRLHGFKPLSYLKDYH 369
D E + YK G+ I + E S +K + L + GF +K +
Sbjct: 285 HLNDEDETEIERENLAKGYKYGKTIVPWLKIDEES-MKLKAAKCLSVLGFTKSENVKRHW 343
Query: 370 NLRPSTFVF---PSDKEVVGSTCIFIALHRSMLRLNRFAVA--FYGNPSNPRLVALVAQD 424
+ VF P+D+ + F AL +++ ++ AV Y N S P+L L Q
Sbjct: 344 LMGDGVVVFMPAPNDEP---AGVAFSALVQALYETDKVAVVRYVYRNNSQPKLGILFPQ- 399
Query: 425 EIVRAGGQVEPPGMHMIYLPYSDDIR--PVEELHSDTDAVP------------------R 464
++A + + I LP+ +DIR L ++ VP R
Sbjct: 400 --IKATYR----SLLFIQLPFMEDIRQYTFASLTTNKKNVPTDDQLDLVDDLVTSMDLSR 453
Query: 465 A-SDDEVKKAAALMKRIDLKDFSVCQFANPSLQRHYAVLQALALEEDD 511
A DD+ + AL ++ NP LQR Y +Q AL DD
Sbjct: 454 AYRDDDGELIEALKPKLTF---------NPVLQRSYQCIQHRALNPDD 492
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,734,435,890
Number of Sequences: 23463169
Number of extensions: 414704294
Number of successful extensions: 1084360
Number of sequences better than 100.0: 522
Number of HSP's better than 100.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 1082232
Number of HSP's gapped (non-prelim): 700
length of query: 623
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 474
effective length of database: 8,863,183,186
effective search space: 4201148830164
effective search space used: 4201148830164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)