BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006976
(623 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547882|ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase, putative [Ricinus communis]
Length = 621
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/625 (72%), Positives = 515/625 (82%), Gaps = 6/625 (0%)
Query: 1 MEEEIKAEFQKNGFNFVDEGE-VLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVK 59
MEEEIKAEF K+GF E E +LKKCLTFCINYNLKP+DLVSSWEVYYLNRQLDESTV+
Sbjct: 1 MEEEIKAEFNKSGFTLDHEEEQILKKCLTFCINYNLKPADLVSSWEVYYLNRQLDESTVQ 60
Query: 60 DDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPD-NLKL 118
+ EMDGF+LHLQNEQKEAIIKEEP LHIYSSKDVDMILNDE E++ E++ GTP D + KL
Sbjct: 61 NGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDEGEDLKEEVPGTPTDESQKL 120
Query: 119 YSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTE 178
S+ DS K+ NGYSS K SK VTPFGRRT+K VVKFNINNLP+TENG EH EN E
Sbjct: 121 NSEPFDSIIKSTGNGYSSGKRSKHVTPFGRRTDKFVVKFNINNLPDTENGDNEHVRENME 180
Query: 179 DDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEP 238
DDIIKR++ KKCS +VHGSGPEPGCRFMYDR EDRFNAL+NRIRKHA ALV+SGLYEEP
Sbjct: 181 DDIIKRVQPRKKCSFVVHGSGPEPGCRFMYDRIEDRFNALDNRIRKHAAALVASGLYEEP 240
Query: 239 TDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
TDPTVASQR +FAVGMICCDG+G LN+KSVLLQSS+EHSGGQRV LDLH L +FS+FPGQ
Sbjct: 241 TDPTVASQRNVFAVGMICCDGEGRLNEKSVLLQSSIEHSGGQRVHLDLHNLSQFSIFPGQ 300
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMI 358
+V IEG NPSGHCL+ASKLVD IPL ++ P+ KQALDQEI S + S +EIS++
Sbjct: 301 IVAIEGHNPSGHCLVASKLVDSIPLSAAPDGNLPPAKKQALDQEIES-IGSSCTQEISVL 359
Query: 359 IAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFH 418
IA+GPFTT DNL FEPL EL++YA RK PQLLILLGPFVDSEHP+IKKGT D SFDEIF
Sbjct: 360 IASGPFTTLDNLMFEPLTELLAYASRKLPQLLILLGPFVDSEHPEIKKGTVDGSFDEIFR 419
Query: 419 LEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTF 478
EILRRLQDYVEYMGS+ + ++VPS RDANHDFV PQP FDI ++ HQI SLTNPG F
Sbjct: 420 QEILRRLQDYVEYMGSDAQVLIVPSTRDANHDFVFPQPAFDIHRSNLQHQIRSLTNPGIF 479
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE 538
EANQ++VGCCTVD++KQL EEMSR DGT ++RM + I FYPLYPPAE
Sbjct: 480 EANQVRVGCCTVDIIKQLGSEEMSRNPTDGTPSNRMSRLANHILSQRS---FYPLYPPAE 536
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
+PLDFSLA EAL I ++P I+I+PSDMKYFIKVLSLGGR EGEEQ KCVC+NPGRLAKG
Sbjct: 537 DVPLDFSLAPEALHIPSVPHILIVPSDMKYFIKVLSLGGRIEGEEQTKCVCINPGRLAKG 596
Query: 599 EGSGTFAEIYYHGSPEMMNASIISI 623
EG GTF E+ Y GSP+ MNAS+I I
Sbjct: 597 EGGGTFVELNYRGSPDKMNASVIGI 621
>gi|225425850|ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product [Vitis vinifera]
Length = 623
Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/626 (69%), Positives = 504/626 (80%), Gaps = 6/626 (0%)
Query: 1 MEEEIKAEFQKNGFNF--VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTV 58
MEEEI EF+K GF+F +E EVLKKCLTFCINY L PSDLVSSWEVYYLNRQLDES V
Sbjct: 1 MEEEIMLEFKKIGFSFHKEEEEEVLKKCLTFCINYKLSPSDLVSSWEVYYLNRQLDESVV 60
Query: 59 KDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNL-K 117
+ MDGF+LHLQNEQKEA+IKEEP LHIYSS DVDMIL+DE E I EDILGTP D +
Sbjct: 61 GNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDEHEEIKEDILGTPSDRSGR 120
Query: 118 LYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENT 177
++D DS + N N S KPS VTPFG+RT K VV+ +NN P+ ENG E+ EN
Sbjct: 121 HHADPFDSAQRTNGNSSSYGKPSNHVTPFGKRTSKFVVQLTVNNPPSAENGKNENKFENV 180
Query: 178 EDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEE 237
+DDII+R++ K+CSL+VHGS P PGCRFMYDR EDRFN+LENRI+KH ALV++GLY+E
Sbjct: 181 DDDIIRRVQPSKRCSLLVHGSRPGPGCRFMYDRIEDRFNSLENRIKKHTTALVATGLYKE 240
Query: 238 PTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
PTDPTVASQ+++FA GMICCDG+G LN+KS+LLQSSV+HSGGQRVRLDL KL +FS+FPG
Sbjct: 241 PTDPTVASQKSVFATGMICCDGEGRLNEKSILLQSSVQHSGGQRVRLDLSKLNQFSIFPG 300
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
QVVGIEG NPSGHCLIASK++D IP+ VD+HP+ KQA D+E S + E+S+
Sbjct: 301 QVVGIEGHNPSGHCLIASKILDSIPVSAPTDVDLHPAKKQARDEEFQSADSSHKLAELSL 360
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
++AAGPFTTTDNL FEPL EL++YA+RK PQLLILLGPFVDSEHP+I+KGT D SFDEIF
Sbjct: 361 MVAAGPFTTTDNLLFEPLTELLAYARRKMPQLLILLGPFVDSEHPEIRKGTVDRSFDEIF 420
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGT 477
HLEILRRLQDYVEYMGS R ILVPSIRDANHDFV PQP F I PPD+ HQITSLTNPG
Sbjct: 421 HLEILRRLQDYVEYMGSAARVILVPSIRDANHDFVFPQPAFSIHPPDLKHQITSLTNPGM 480
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
F+AN++KVGCCTVDV+KQLSGE +SR DG+S DRM + I FYPLYP A
Sbjct: 481 FDANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDRMTTIANHILSQRS---FYPLYPLA 537
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
EGIPLDFSLA EAL +STIPD++ILPSD+ F+KVLSLGGRNEGEE KC+CVNPGRLAK
Sbjct: 538 EGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLGGRNEGEELVKCICVNPGRLAK 597
Query: 598 GEGSGTFAEIYYHGSPEMMNASIISI 623
GEG G F E+ Y GSP+ +AS+I I
Sbjct: 598 GEGGGHFVELNYQGSPDKTSASVIRI 623
>gi|297841461|ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
gi|297334453|gb|EFH64871.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
Length = 619
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/625 (64%), Positives = 493/625 (78%), Gaps = 12/625 (1%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
+EEIK EF+++GF V+E ++LK+C+T CINY+L PSDLVSSWE+Y+LNRQL + TVK D
Sbjct: 4 DEEIKNEFKRSGFTLVEEDDILKRCVTLCINYSLNPSDLVSSWELYHLNRQLLDQTVKKD 63
Query: 62 EMDGFMLHLQNEQKEAIIK-EEPSLHIYSSKDVDMILNDEDENIAEDILGTPP-DNLKLY 119
EMDGF+LHLQNEQKE+I++ EE LH+YS++DVDM+L+ E+ E+I+ TP ++ +L+
Sbjct: 64 EMDGFVLHLQNEQKESIMRAEEAGLHLYSNRDVDMLLDGVQED-TEEIVTTPTNESQRLH 122
Query: 120 SDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTED 179
D DS ++ GYS+ K VTPFG R EK VVKFN+ N+ ENG ++ EN+ED
Sbjct: 123 PDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAPAENGN-SNEIENSED 181
Query: 180 DIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPT 239
DIIKR++T ++CSL V+GSGPEPGCRFMYDRTEDRFN LENRI +HA+A +SGLYEE
Sbjct: 182 DIIKRVQTSQRCSLEVNGSGPEPGCRFMYDRTEDRFNVLENRIVRHADAFAASGLYEEQV 241
Query: 240 DPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQV 299
DP VASQR++FAVGMICCDG+GHLNDKSVLLQSS E + GQRV LDL++L +FS+FPGQ+
Sbjct: 242 DPAVASQRSIFAVGMICCDGEGHLNDKSVLLQSSAERTSGQRVPLDLNRLDQFSIFPGQI 301
Query: 300 VGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIH-STVVISRPEEISMI 358
VGIEG NPSGH L ASKL+D +PL VD+ P+ +Q LDQE+ T E+S I
Sbjct: 302 VGIEGQNPSGHYLTASKLLDSVPLIRAVDVDLPPAKRQNLDQEVLVPTEESCERSEVSFI 361
Query: 359 IAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFH 418
IA+GPFTT+DNL FEPL EL+SYAKRK PQLL+LLGPFVDSEHP+IKKG D++F EIF
Sbjct: 362 IASGPFTTSDNLLFEPLNELLSYAKRKPPQLLVLLGPFVDSEHPEIKKGAVDATFSEIFQ 421
Query: 419 LEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTF 478
+E+LR+L+DYVE+MGSEVR +LVPSIRDANHDF+ PQPPFDI PD+ HQ+TSL+NPGTF
Sbjct: 422 VEVLRKLRDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGTF 481
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE 538
EANQ+KVGCCTVDVLKQLSGEEMS+ + G DRM + S + FYPLYPP E
Sbjct: 482 EANQVKVGCCTVDVLKQLSGEEMSK-NPSGVPTDRMSRLA---SHLLRQRSFYPLYPPPE 537
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
+P D SLA +AL I +IPDI++LPSDM+YF+K+LSLG E E KCVCVNPGRLAKG
Sbjct: 538 SLPYDSSLAPKALQILSIPDILLLPSDMRYFVKILSLG---EEENAAKCVCVNPGRLAKG 594
Query: 599 EGSGTFAEIYYHGSPEMMNASIISI 623
EG+GTF E+ Y G PE M ASIISI
Sbjct: 595 EGAGTFVELTYKGGPESMRASIISI 619
>gi|30697540|ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana]
Length = 620
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/626 (63%), Positives = 499/626 (79%), Gaps = 13/626 (2%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
+EEIK EF+++GF V+E E+LK+C+T CINY+LKPSDLVSSWE+Y+LNRQL + TVK D
Sbjct: 4 DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63
Query: 62 EMDGFMLHLQNEQKEAIIK-EEPSLHIYSSKDVDMILNDEDENIAEDILGTPPD-NLKLY 119
+MDGF+LHLQNEQKE+I++ EE LH+YS++DVDM+L+ E+ E+I+ TP + + +L+
Sbjct: 64 DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQED-TEEIVTTPTNKSQRLH 122
Query: 120 SDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLP-NTENGCIEHDDENTE 178
D DS ++ GYS+ K VTPFG R EK VVKFN+ N+ + ENG +D EN+E
Sbjct: 123 PDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGN-NNDVENSE 181
Query: 179 DDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEP 238
DDIIKR++T ++CSL V+GSGPEPGCRFMYDRTEDRF+ALE RI +HA+A +SGLYEE
Sbjct: 182 DDIIKRVQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSALEYRIVRHADAFAASGLYEEQ 241
Query: 239 TDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
DP VASQR++FAVGMICCDG+GHLNDKS+LLQSS E + GQRV +DL +L +FS+FPGQ
Sbjct: 242 VDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPGQ 301
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVIS-RPEEISM 357
VVGIEG NPSGH L ASKL+D +PL + VD+ P+ +Q LDQE+ S + E+S
Sbjct: 302 VVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQILDQEVLVPAEESCQKSEVSF 361
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
IIA+GPFTT+DNL FEPL EL++YAKRK PQLL+LLGPFVDSEHP+IKKG D++F+EIF
Sbjct: 362 IIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGAVDATFNEIF 421
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGT 477
+E+LR+LQDYVE+MGSEVR +LVPSIRDANHDF+ PQPPFDI PD+ HQ+TSL+NPGT
Sbjct: 422 QVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGT 481
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
FEANQ+KV CCTVDVLKQLSGEEMS+ + G DRM + S + FYPLYPP
Sbjct: 482 FEANQVKVSCCTVDVLKQLSGEEMSK-NPSGVPTDRMSRLA---SHLLRQRSFYPLYPPP 537
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
E +P D SLA +AL IS+IPDI++LPSDM+YF+K+LSLG E E+ KCVCVNPGRLAK
Sbjct: 538 ESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLG---EEEDAAKCVCVNPGRLAK 594
Query: 598 GEGSGTFAEIYYHGSPEMMNASIISI 623
GEG+GTF E+ Y G PE M+ASIISI
Sbjct: 595 GEGAGTFVELTYKGGPESMHASIISI 620
>gi|26452176|dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis thaliana]
Length = 620
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/626 (63%), Positives = 499/626 (79%), Gaps = 13/626 (2%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
+EEIK EF+++GF V+E E+LK+C+T CINY+LKPSDLVSSWE+Y+LNRQL + TVK D
Sbjct: 4 DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63
Query: 62 EMDGFMLHLQNEQKEAIIK-EEPSLHIYSSKDVDMILNDEDENIAEDILGTPPD-NLKLY 119
+MDGF+LHLQNEQKE+I++ EE LH+YS++DVDM+L+ E+ E+I+ TP + + +L+
Sbjct: 64 DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQED-TEEIVTTPTNKSQRLH 122
Query: 120 SDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLP-NTENGCIEHDDENTE 178
D DS ++ GYS+ K VTPFG R EK VVKFN+ N+ + ENG +D EN+E
Sbjct: 123 PDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGN-NNDVENSE 181
Query: 179 DDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEP 238
DDIIKR++T ++CSL V+GSGPEPGCRFMYDRTEDRF+ALE RI +HA+A +SGLYEE
Sbjct: 182 DDIIKRVQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSALEYRIVRHADAFAASGLYEEQ 241
Query: 239 TDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
DP VASQR++FAVGMICCDG+GHLNDKS+LLQSS E + GQRV +DL +L +FS+FPGQ
Sbjct: 242 VDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPGQ 301
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVIS-RPEEISM 357
VVGIEG NPSGH L ASKL+D +PL + VD+ P+ +Q LDQE+ S + E+S
Sbjct: 302 VVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQILDQEVLVPAEESCQKSEVSF 361
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
IIA+GPFTT+DNL FEPL EL++YAKRK PQLL+LLGPFVDSEHP+IKKG D++F+EIF
Sbjct: 362 IIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGAVDATFNEIF 421
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGT 477
+E+LR+LQDYVE+MGSEVR +LVPSIRDANHDF+ PQPPFDI PD+ HQ+TSL+NPGT
Sbjct: 422 QVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGT 481
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
FEANQ+KV CCTVDVLKQLSGEEMS+ + G DRM + S + FYPLYPP
Sbjct: 482 FEANQVKVSCCTVDVLKQLSGEEMSK-NPSGVPTDRMSRLA---SHLLRQRSFYPLYPPP 537
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
E +P D SLA +AL IS+IPDI++LPSDM+YF+K+LSLG E E+ KCVCVNPGRLAK
Sbjct: 538 ESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLG---EEEDAAKCVCVNPGRLAK 594
Query: 598 GEGSGTFAEIYYHGSPEMMNASIISI 623
GEG+GT+ E+ Y G PE M+ASIISI
Sbjct: 595 GEGAGTYVELTYKGGPESMHASIISI 620
>gi|449439345|ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/626 (62%), Positives = 478/626 (76%), Gaps = 7/626 (1%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
MEEEI EF+++GF F +E E+LKKC+TFC+NYNLKPSD+VSSWEVYYLNR LD S V+
Sbjct: 1 MEEEIGEEFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVEL 60
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTP-PDNLKLY 119
+++DGF+ HLQNEQKE +IK EP LH+YSSKDVD+ILNDE+E++ EDIL TP + L+
Sbjct: 61 EQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDILKTPNGKSQSLH 120
Query: 120 SDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTED 179
+ LD T N +SS KPSK TPFG+RTEK VV+FNINN+P+ + EN ED
Sbjct: 121 KERLDLTPYTNEGLFSSGKPSKHETPFGQRTEKFVVRFNINNMPDMVTAVKVDNSENDED 180
Query: 180 DIIKRIKTGKKCSLMVHGSG--PEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEE 237
IIK+++ + CSL VHGSG EP CRFMYD+ EDRFNAL+NRI +HA AL +SGLYEE
Sbjct: 181 TIIKKVRPLQGCSLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAKALAASGLYEE 240
Query: 238 PTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
DPTVASQ+++FAVGMI CDG+GHLNDKS+LLQSS+ HSGGQRVRL+L L +FS+FPG
Sbjct: 241 AVDPTVASQKSIFAVGMIYCDGEGHLNDKSILLQSSIAHSGGQRVRLELQNLSQFSIFPG 300
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
QVVGIEG NPSGHCLIASKLVD PL + P+ K AL+ +I S P E+SM
Sbjct: 301 QVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSM 360
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
IIA+GP+TTTDNL FEPL EL++YAKRK PQLLILLGPFVDSEH IK+GT + SF+EIF
Sbjct: 361 IIASGPYTTTDNLLFEPLTELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVEMSFEEIF 420
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGT 477
E+LRR+QDY E+MG + R +L+PS RDANHDF PQP FDI P D+ QI+S NP
Sbjct: 421 KFEVLRRVQDYAEHMGPDARVLLMPSTRDANHDFAFPQPAFDI-PSDLKLQISSPPNPCI 479
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
EANQ K+ CCT+D+L+ LSGEE+SR G +NDR+ + I FYPLYPPA
Sbjct: 480 LEANQAKIACCTMDILRHLSGEELSRNLTKGGTNDRLSTLASHILRQRS---FYPLYPPA 536
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
EG+PLDFSLA +AL IS IPDI+ILPSDMK+F+KV+SLG EEQ +CVCVNPGRLAK
Sbjct: 537 EGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGRLAK 596
Query: 598 GEGSGTFAEIYYHGSPEMMNASIISI 623
GEG GTF E+ Y G P+ +NA ++SI
Sbjct: 597 GEGGGTFVELNYFGRPDQINAMVVSI 622
>gi|357463079|ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit B [Medicago truncatula]
Length = 616
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/628 (62%), Positives = 487/628 (77%), Gaps = 17/628 (2%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
M+EEIK+EF+K GF+F +E E+L KCLTFCINY+L PSDLVSSWEVYYLNRQLDE V++
Sbjct: 1 MKEEIKSEFKKAGFDFDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLDEPIVQN 60
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYS 120
EM+GFMLHLQN K+ IIKEE LH+YS DV+MILND+D +D TP +N +
Sbjct: 61 AEMEGFMLHLQNNVKDDIIKEETGLHLYSIGDVEMILNDDD--TKDDTPSTPTNNRQDVY 118
Query: 121 DALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDD 180
+ T N +S KP+ LVTPF +RT++ VKF+IN +P+ ENG E + EN E+D
Sbjct: 119 SPIHDTPSLYGNILASGKPADLVTPFSKRTDRFAVKFSINTIPDVENGKQELNHENEEND 178
Query: 181 ---IIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEE 237
I+ +I + K+CSL++HGSGP+PGCRFMYDRTED+ NA+ENRI+KHA ALV+SGLYEE
Sbjct: 179 EYNIVSKIVSRKRCSLVIHGSGPKPGCRFMYDRTEDKINAIENRIKKHARALVASGLYEE 238
Query: 238 PTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
PTDP++AS R+ F++GMICCDG+G LN+KSV+LQSS+EHSGG+ VRLDL +L +S+FPG
Sbjct: 239 PTDPSIASPRSFFSIGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSVFPG 298
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
QVVGI G NPSGHCL+ASKLVD IP V A D++PS KQA+D+E T ++ E+SM
Sbjct: 299 QVVGIGGHNPSGHCLVASKLVDYIPTSV-AKEDLNPSKKQAIDKENQPTELLCNQRELSM 357
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
IIAAGPFTTTDNL+FEPL EL++YAKR+ PQLL+LLGPF+DSEHP IKKGT D FDEIF
Sbjct: 358 IIAAGPFTTTDNLFFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDRDFDEIF 417
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGT 477
LE+LR+L+DYVE MGS VR +LVPSIRDANHDFV PQP FDI P + QI SLTNPG
Sbjct: 418 RLEVLRKLEDYVESMGSAVRVLLVPSIRDANHDFVFPQPAFDISQPQL--QIASLTNPGI 475
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
FEAN++KVGCCT+DVLKQ+SGEE+SR S D DR+ + I FYPLYPPA
Sbjct: 476 FEANEVKVGCCTLDVLKQISGEEISRISADRKPIDRLSRLANHILNQQS---FYPLYPPA 532
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEE--QKKCVCVNPGRL 595
E +PLDFSLA EAL + +PD++ILPSD+KYF+KVL NEGEE + KC+ VNPGRL
Sbjct: 533 ESVPLDFSLAPEALQLPLVPDVLILPSDLKYFVKVLD----NEGEETNRMKCIAVNPGRL 588
Query: 596 AKGEGSGTFAEIYYHGSPEMMNASIISI 623
AKGEG GTF E+ Y G + +NASI++I
Sbjct: 589 AKGEGGGTFVELDYSGGLDKINASILAI 616
>gi|12324682|gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
Length = 620
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/635 (60%), Positives = 486/635 (76%), Gaps = 31/635 (4%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
+EEIK EF+++GF V+E E+LK+C+T CINY+LKPSDLVSSWE+Y+LNRQL + TVK D
Sbjct: 4 DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63
Query: 62 EMDGFMLHLQNEQKEAIIK-EEPSLHIYSSKDVDMILNDEDENIAEDILGTPPD-NLKLY 119
+MDGF+LHLQNEQKE+I++ EE LH+YS++DVDM+L+ E+ E+I+ TP + + +L+
Sbjct: 64 DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQED-TEEIVTTPTNKSQRLH 122
Query: 120 SDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLP-NTENGCIEHDDENTE 178
D DS ++ GYS+ K VTPFG R EK VVKFN+ N+ + ENG +D EN+E
Sbjct: 123 PDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGN-NNDVENSE 181
Query: 179 DDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEP 238
DDIIKR++T ++CSL V+GSGPEPGCRFMYDRTEDRF+ALE RI +HA+A +SGLYEE
Sbjct: 182 DDIIKRVQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSALEYRIVRHADAFAASGLYEEQ 241
Query: 239 TDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
DP VASQR++FAVGMICCDG+GHLNDKS+LLQSS E + GQRV +DL +L +FS+FPGQ
Sbjct: 242 VDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSAERTSGQRVPVDLKRLDQFSIFPGQ 301
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVIS-RPEEISM 357
VVGIEG NPSGH L ASKL+D +PL + VD+ P+ +Q LDQE+ S + E+S
Sbjct: 302 VVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQILDQEVLVPAEESCQKSEVSF 361
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
IIA+GPFTT+DNL FEPL EL++YAKRK PQLL+LLGPFVDSEHP+IKKG D++F+EIF
Sbjct: 362 IIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDSEHPEIKKGAVDATFNEIF 421
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGT 477
+E+LR+LQDYVE+MGSEVR +LVPSIRDANHDF+ PQPPFDI PD+ HQ +S P +
Sbjct: 422 QVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFDIHIPDLEHQFSS-EKPYS 480
Query: 478 FEA---------NQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAF 528
++ +Q+KV CCTVDVLKQLSGEEMS+ + G DRM + S +
Sbjct: 481 LKSLQHKMLTGYSQVKVSCCTVDVLKQLSGEEMSK-NPSGVPTDRMSRLA---SHLLRQR 536
Query: 529 FFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCV 588
FYPLYPP E +P D SLA +AL IS+IPDI++LPSDM+YF+K + KCV
Sbjct: 537 SFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVK-----------DAAKCV 585
Query: 589 CVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
CVNPGRLAKGEG+GTF E+ Y G PE M+ASIISI
Sbjct: 586 CVNPGRLAKGEGAGTFVELTYKGGPESMHASIISI 620
>gi|356569195|ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/628 (60%), Positives = 479/628 (76%), Gaps = 27/628 (4%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
MEE+IK+EF+++GF DE E+L KC+T+CINY+L PSDLVSSWEVYYLNRQL+E V++
Sbjct: 1 MEEQIKSEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQN 60
Query: 61 DEMDGFMLHLQNEQKEAIIKE--EPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLK- 117
E+DGF+LHLQNE+KE +IKE E LHIYS DV+MILN++D+ ++ GTP ++ +
Sbjct: 61 TEIDGFLLHLQNEKKETVIKEKEEAGLHIYSIGDVEMILNNDDDT-KDNTPGTPINHHQD 119
Query: 118 LYSDALDSTYKANANGYSSDKPSK--LVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDE 175
S ALD+T N SS KPSK L+TPF +RT+K VVKF+IN +P E E
Sbjct: 120 PLSPALDTTSLMYENVLSSGKPSKSKLITPFSKRTDKFVVKFSINTVPKVEKA------E 173
Query: 176 NTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLY 235
N EDD++ R+ ++CSL +H SGP+PGCRF+YDRTEDR NA+ENR+RK+ A V+SGLY
Sbjct: 174 NDEDDVLTRVPLHERCSLSIHRSGPKPGCRFLYDRTEDRLNAIENRLRKYTRAFVASGLY 233
Query: 236 EEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
EEPTDPT ASQR++FAVGMICCDG+G LN+KSV+LQSS+EHSGG+ VRLDL +L +S+F
Sbjct: 234 EEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSIF 293
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
PGQ+VGI G NPSGHC +A+KLVD IP + A D +P+ KQA+D+E T ++ + E+
Sbjct: 294 PGQIVGIGGHNPSGHCFVATKLVDSIPTYI-ANEDSNPAKKQAVDKENQPTDLLCKEREL 352
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDE 415
SMIIAAGPFTTTDNL FEPL L+++AK + PQLL+LLGPFVDSEHP IKKGT D SFDE
Sbjct: 353 SMIIAAGPFTTTDNLLFEPLIALLTHAKLRPPQLLVLLGPFVDSEHPDIKKGTVDRSFDE 412
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNP 475
IF EIL++L++YV+ S R +LVPSIRDANHDFV PQP D++ QI SL+NP
Sbjct: 413 IFE-EILKKLEEYVD---SATRVVLVPSIRDANHDFVFPQPALDMK-----SQIVSLSNP 463
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
G FEAN++KVGCCTVD+LKQ+SGEE+SR + DG DR+ + I FYPLYP
Sbjct: 464 GIFEANKVKVGCCTVDILKQISGEEISRTAADGKPIDRLSRLANHILNQQS---FYPLYP 520
Query: 536 PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRL 595
PAEG+PLDFSLA EAL +S+IPDI+ILPSD+KYF+KVLS NEG KC+ VNPGRL
Sbjct: 521 PAEGVPLDFSLAPEALQLSSIPDILILPSDIKYFVKVLS--SENEGINHTKCIAVNPGRL 578
Query: 596 AKGEGSGTFAEIYYHGSPEMMNASIISI 623
AKGEG GTF E+ Y G + +NAS++ I
Sbjct: 579 AKGEGGGTFVELDYCGGSDQINASVVGI 606
>gi|356538103|ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 605
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/628 (60%), Positives = 480/628 (76%), Gaps = 28/628 (4%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
MEEEIK+EF+++GF DE E+L KC+TFCINY+L PSDLVSSWEVYYLNRQL+E V++
Sbjct: 1 MEEEIKSEFKRSGFGLEDEQEILSKCVTFCINYSLTPSDLVSSWEVYYLNRQLNEPVVQN 60
Query: 61 DEMDGFMLHLQNEQKEAIIKE--EPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLK- 117
E+DGF+LHLQNE+KE +IKE E LHIYS DV+MILN++D+ ++ GTP ++ +
Sbjct: 61 AEIDGFLLHLQNEKKEDVIKEKEEAGLHIYSIGDVEMILNNDDDT-KDNTPGTPINHHQD 119
Query: 118 LYSDALDSTYKANANGYSSDKPSK--LVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDE 175
S A D+ N SS KPSK LVTPF +RT+K VKF+IN +PN EN DE
Sbjct: 120 PLSPAPDTPSLMYENVLSSGKPSKSKLVTPFSKRTDKFAVKFSINTVPNVEN------DE 173
Query: 176 NTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLY 235
N EDD+++R+ ++ SL +HGSGP+PGCRF+YDRTEDR NA+ENR+RKH A V+SGL+
Sbjct: 174 N-EDDVVRRVPLFERSSLSIHGSGPKPGCRFLYDRTEDRLNAIENRLRKHTRAFVASGLH 232
Query: 236 EEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
EEPTDPT ASQR++FAVGMICCDG+G LN+KSV+LQSS+EHSGG+ VRLDL +L +S+F
Sbjct: 233 EEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSIF 292
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
PGQ+VGI G NPSGHC +A+KLVD IP V A D +P+ KQA+D+E T ++ + ++
Sbjct: 293 PGQIVGIGGHNPSGHCFVATKLVDSIPTSV-ADEDSNPAKKQAVDKENQPTDLLCKQRKL 351
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDE 415
SMIIAAGPFTTTDNL FEPL EL+ +AK + PQLL+LLGPFVDSEHP IKKGT D+SFDE
Sbjct: 352 SMIIAAGPFTTTDNLLFEPLIELLKHAKLRPPQLLVLLGPFVDSEHPDIKKGTVDTSFDE 411
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNP 475
IF EIL++L++YV+ S R +LVPSIRDANHDFV PQP FDI+ QI SL+NP
Sbjct: 412 IFE-EILKKLEEYVD---SATRVLLVPSIRDANHDFVFPQPAFDIK-----SQIVSLSNP 462
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
G FEAN++KVGCCTVD+LKQ+SGEE+SR + DG DR+ + I FYPLY
Sbjct: 463 GIFEANKVKVGCCTVDILKQISGEEISRTAADGKPIDRLSRLANHILNQQS---FYPLYT 519
Query: 536 PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRL 595
PAE +PLDFSLA EAL +S +PDI+ILPSD+KYF+KVLS NEG KC+ +NPGRL
Sbjct: 520 PAESVPLDFSLAPEALQLSFVPDILILPSDIKYFVKVLS--SENEGINHTKCIAINPGRL 577
Query: 596 AKGEGSGTFAEIYYHGSPEMMNASIISI 623
AKGEG GTF E+ Y G+ + +NASI+ I
Sbjct: 578 AKGEGGGTFVELDYCGASDQINASIVGI 605
>gi|11072016|gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/622 (59%), Positives = 468/622 (75%), Gaps = 45/622 (7%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
+EEIK EF+++GF V+E E+LK+C+T CINY+LKPSDLVSSWE+Y+LNRQL + TVK D
Sbjct: 4 DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63
Query: 62 EMDGFMLHLQNEQKEAIIK-EEPSLHIYSSKDVDMILNDEDENIAEDILGTPPD-NLKLY 119
+MDGF+LHLQNEQKE+I++ EE LH+YS++DVDM+L+ E+ E+I+ TP + + +L+
Sbjct: 64 DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQED-TEEIVTTPTNKSQRLH 122
Query: 120 SDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLP-NTENGCIEHDDENTE 178
D DS ++ GYS+ K VTPFG R EK VVKFN+ N+ + ENG +D EN+E
Sbjct: 123 PDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKFNVGNVAAHAENGN-NNDVENSE 181
Query: 179 DDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEP 238
DDIIKR++T ++CSL V+GSGPEPGCRFMYDRTEDRF+ALE RI +HA+A +SGLYEE
Sbjct: 182 DDIIKRVQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSALEYRIVRHADAFAASGLYEEQ 241
Query: 239 TDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQS------------------SVEHSGGQ 280
DP VASQR++FAVGMICCDG+GHLNDKS+LLQS S E + GQ
Sbjct: 242 VDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSSKYPEFPYPNANKFDDCSAERTSGQ 301
Query: 281 RVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALD 340
RV +DL +L +FS+FPGQVVGIEG NPSGH L ASKL+D +PL + VD+ P+ +Q LD
Sbjct: 302 RVPVDLKRLDQFSIFPGQVVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQILD 361
Query: 341 QEIHSTVVIS-RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDS 399
QE+ S + E+S IIA+GPFTT+DNL FEPL EL++YAKRK PQLL+LLGPFVDS
Sbjct: 362 QEVLVPAEESCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLGPFVDS 421
Query: 400 EHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD 459
EHP+IKKG D++F+EIF +E+LR+LQDYVE+MGSEVR +LVPSIRDANHDF+ PQPPFD
Sbjct: 422 EHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFPQPPFD 481
Query: 460 IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSL 519
I PD+ H Q+KV CCTVDVLKQLSGEEMS+ + G DRM +
Sbjct: 482 IHIPDLEH--------------QVKVSCCTVDVLKQLSGEEMSK-NPSGVPTDRMSRLA- 525
Query: 520 DISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 579
S + FYPLYPP E +P D SLA +AL IS+IPDI++LPSDM+YF+K+LSLG
Sbjct: 526 --SHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLG--- 580
Query: 580 EGEEQKKCVCVNPGRLAKGEGS 601
E E+ KCVCVNPGRLAKGEG+
Sbjct: 581 EEEDAAKCVCVNPGRLAKGEGA 602
>gi|242095348|ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/645 (54%), Positives = 448/645 (69%), Gaps = 41/645 (6%)
Query: 1 MEEEIKAEFQKNGFNF-----VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+AEFQ +GF+ D ++L LT+CINY + P+DLVS+WEVYYLNRQLD
Sbjct: 1 MEEEIRAEFQNSGFSIGGASSEDAAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60
Query: 56 STVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDE--DENIAEDILGT-- 111
++ +DGF+ HLQNE KE IIKEE +LHIYSS DVDM+L++ DE D G+
Sbjct: 61 LKLESSYLDGFLSHLQNEVKERIIKEEANLHIYSSNDVDMLLSNSHADEVAFHDTPGSKQ 120
Query: 112 --PPDN------LKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLP 163
PP+ L SD S+ A N +D+ +TPF R K ++ +N
Sbjct: 121 EKPPEESSNSELTPLTSDRPSSSRVAKTN---ADR----ITPFATRVNKFTQQYVLN--A 171
Query: 164 NTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIR 223
+ + E TED++I+RI+ ++CSL V S PEPGCRFMYDR EDRFN LE+RIR
Sbjct: 172 DNAVSVPSKNAEITEDEVIRRIQPSQRCSLQVQRSQPEPGCRFMYDRMEDRFNYLEDRIR 231
Query: 224 KHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR 283
K A+ +SG +P D T+AS+ +FAVG + CDG+GHLN+KS+LLQ SV+HS GQRVR
Sbjct: 232 KSASLFSASGFCGQPADATLASEEKMFAVGTVACDGEGHLNEKSILLQGSVQHSRGQRVR 291
Query: 284 LDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEI 343
LDL L FSLFPGQVVGIEG NPSGHC +ASKL+D IP+ VDA + + KQA+D E
Sbjct: 292 LDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVDA--QLPSAKKQAIDNES 349
Query: 344 HSTV---VISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSE 400
+ +SR +S +IAAGP+TTTDNL FEPL+EL+SYA RKQPQLLIL+GPF+DS+
Sbjct: 350 NQNSDAGTLSR--ALSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSD 407
Query: 401 HPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDI 460
HP IKKGT D SF +IFH EILR++QD+ +Y+G+ VR IL+PS+RDA+HDFV PQP FD+
Sbjct: 408 HPDIKKGTVDQSFHDIFHFEILRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPAFDL 467
Query: 461 Q-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSL 519
P DI HQIT L NP F +N+I GCCTVD+LKQLSGEE+SR G DR+ +
Sbjct: 468 NFPEDITHQITCLANPCLFSSNEIHFGCCTVDILKQLSGEEISRKPPVGKPADRIGRLAS 527
Query: 520 DISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 579
I +YPLYP A G+PLDFSLA+EAL IS+ PD+++LPSD+ F+KVLSLG
Sbjct: 528 HILKQQS---YYPLYPSAAGVPLDFSLAKEALEISSAPDVLLLPSDLAPFVKVLSLG--- 581
Query: 580 EG-EEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
EG ++QK+ +CVNPGRLAKG G GTF E+YY+ + NASII I
Sbjct: 582 EGSDDQKRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 626
>gi|357160336|ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
distachyon]
Length = 625
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/644 (53%), Positives = 441/644 (68%), Gaps = 40/644 (6%)
Query: 1 MEEEIKAEFQKNGFNF-----VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+ EF+ +GF+ D ++L LT+CINY + P+DLVS+WEVYYLNRQLD
Sbjct: 1 MEEEIRTEFESSGFSIGGAGPSDSAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60
Query: 56 STVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDN 115
V+ +DGF+ HLQNE K+ +IKEE LH+YSS D+DM+LN+ E L TP
Sbjct: 61 LKVESSYLDGFLTHLQNEVKDKLIKEETDLHVYSSNDIDMLLNNALTE-EEGFLDTPSTK 119
Query: 116 LK-------------LYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNL 162
L+ L +D S+ A NG +TPF +R K + + N
Sbjct: 120 LEKSHGEPSNSELTPLTTDRPSSSRAAKTNG-------DRITPFAQRVNKFAQHY-VLNA 171
Query: 163 PNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRI 222
+ N + + E +ED++I+R++ ++C+L V S PEPGCRFMYDR EDRFN LE+RI
Sbjct: 172 DDMANVPSKPEVETSEDELIRRVQPRQRCTLQVQRSHPEPGCRFMYDRMEDRFNYLEDRI 231
Query: 223 RKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRV 282
R A+ ++GL EP D T+AS+ +FAVGM+ CDG+G LN+KS+LLQ SVEHS GQRV
Sbjct: 232 RSSASLFSATGLCGEPADATLASEDNMFAVGMVICDGEGRLNEKSILLQGSVEHSRGQRV 291
Query: 283 RLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQE 342
RLDL + EFSLFPGQVVGIEG NPSGHC +ASKL+D IP+PVD + S KQALD E
Sbjct: 292 RLDLKDINEFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVPVDDQLPC--SKKQALDDE 349
Query: 343 -IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEH 401
++ +SR +S +IAAGP+TTTDNL FEPL+EL+SYA RKQPQLLIL+GPF+DS+H
Sbjct: 350 GRQNSNTLSR--VLSSVIAAGPYTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDH 407
Query: 402 PQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ 461
P IK+GT D SF +IFH EILR+LQD+ +Y+G VR ILVPS+RDA+HD V PQP FD+
Sbjct: 408 PDIKRGTVDQSFHDIFHFEILRKLQDFTQYLGHSVRVILVPSVRDAHHDTVFPQPAFDLN 467
Query: 462 -PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
P DI HQIT L NP F +N+I GCCT D+LKQLSG+E+SR G DR+ +
Sbjct: 468 LPEDITHQITCLANPSIFSSNEIHFGCCTTDILKQLSGDEISRKPPGGKPADRIGRLAKH 527
Query: 521 ISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNE 580
I +YPLYPPA G+P+DFSLA+EA IS+ PD+++LPSD+ F+KVLSL NE
Sbjct: 528 ILKQQS---YYPLYPPAAGVPMDFSLAKEAFEISSPPDVLLLPSDLAPFVKVLSL---NE 581
Query: 581 G-EEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
G EEQK VCVNPGRLAKG G GTF E+YY+ + NA I+ I
Sbjct: 582 GAEEQKWFVCVNPGRLAKGIGGGTFVELYYNEDTDKTNAFIMRI 625
>gi|326487588|dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/640 (53%), Positives = 447/640 (69%), Gaps = 32/640 (5%)
Query: 1 MEEEIKAEFQKNGFNF-----VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+AEFQ NGF D ++L LT+C+NY + P+DLVS+WEVYYLNRQLD
Sbjct: 1 MEEEIRAEFQSNGFIIGGAGPADSAQILSTLLTYCVNYKMSPADLVSNWEVYYLNRQLDG 60
Query: 56 STVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDN 115
V+ +DGF+ HLQNE KE +IKEE LHIYSS DVDM+L++ + E IL TP +
Sbjct: 61 LKVESSYLDGFLSHLQNEVKEKLIKEETDLHIYSSNDVDMLLSNTHTD-EEGILDTP--S 117
Query: 116 LKLYSDALDSTYKANANGYSSDKPSKL---------VTPFGRRTEKLVVKFNINNLPNTE 166
K +DS+ + ++++PS + +TPF +R K + + N N
Sbjct: 118 TKQEKPHVDSS-NSELTPLTTERPSSIRAAKTNGDRITPFAQRVNKFTQHY-VLNADNVA 175
Query: 167 NGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHA 226
+ + + E +ED++I+RI+ +KC+L V S PEPGCRFMYDR EDRFN LE RI + A
Sbjct: 176 SVPSKDEVETSEDELIRRIQPSQKCTLQVQRSKPEPGCRFMYDRMEDRFNYLEGRIGRSA 235
Query: 227 NALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDL 286
++GL +P D T+AS+ +FAVGM+ CDG+G LN+KS+LLQ SVEHS GQRVRLDL
Sbjct: 236 RLFSATGLCGQPADATLASEENMFAVGMVICDGEGRLNEKSILLQGSVEHSRGQRVRLDL 295
Query: 287 HKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHP-SMKQALDQEIH- 344
+ +FSLFPGQVVGIEG NPSGHC +ASKL+D IP+ VD D P + KQA+D E H
Sbjct: 296 KDINQFSLFPGQVVGIEGHNPSGHCFVASKLIDSIPVSVD---DQLPCAKKQAVDHEGHQ 352
Query: 345 STVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQI 404
++ +SR +S +IAAGPFTTTDNL FEPL+EL+SYA RKQPQLLIL+GPF+DS+HP+I
Sbjct: 353 NSNTLSR--VLSSVIAAGPFTTTDNLLFEPLQELLSYACRKQPQLLILMGPFIDSDHPEI 410
Query: 405 KKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ-PP 463
KKGT+D SF +IF EILR+LQD+ +Y+G VR ILVPS+RDA+HD V PQP FD+ P
Sbjct: 411 KKGTSDQSFHDIFRFEILRKLQDFTQYLGYNVRVILVPSVRDAHHDTVFPQPAFDLHLPE 470
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISL 523
DI QIT L+NP F +N+I+ GCCTVD+LKQLSG+E+SR G + DR+ + I
Sbjct: 471 DITQQITCLSNPSLFSSNEIQFGCCTVDILKQLSGDEISRKPPGGKAADRIGRLATHIVK 530
Query: 524 MGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEE 583
+YPLYPPA G+P+DFSLA+EAL I + PD+++LPSD+ +KVLS+ + EE
Sbjct: 531 QQS---YYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVLSVN--EDTEE 585
Query: 584 QKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
QK+ +CVNPGRLAKG G GTF E+YY+ E A I+ I
Sbjct: 586 QKRFICVNPGRLAKGIGGGTFVELYYNEDTEKTKAFIMRI 625
>gi|212274797|ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/644 (52%), Positives = 437/644 (67%), Gaps = 39/644 (6%)
Query: 1 MEEEIKAEFQKNGFNF-----VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+ EFQ NGF+ D ++L LT+CINY + P+DLVS+WEVYYLNRQLD
Sbjct: 1 MEEEIRKEFQSNGFSIGGAGPEDAAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60
Query: 56 STVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDE--DENIAEDILGTPP 113
++ +DGF+ HLQNE K+ IIKEE +LHIYSS DVDM+L++ DE D G
Sbjct: 61 LKLESSYLDGFLSHLQNEVKDRIIKEEANLHIYSSNDVDMLLSNSHVDEAAFHDTPGYEQ 120
Query: 114 DNLKLYSDALDSTYKANANGYSSDKPSK---------LVTPFGRRTEKLVVKFNINNLPN 164
+ A + + + +SD+PS +TPF R K ++ +N +
Sbjct: 121 EK------APEGSSISELTPLASDRPSSSRVAKTNADRITPFATRVNKFTQQYVLN--AD 172
Query: 165 TENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRK 224
G E TED+II+R++ ++C L V S PEPGCRFMYDR EDRFN LE+RIRK
Sbjct: 173 NAVGVPSKSAEITEDEIIRRVQPSQRCYLQVQRSQPEPGCRFMYDRMEDRFNYLEDRIRK 232
Query: 225 HANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL 284
A+ +SG +P D T+AS+ +FAVG + CDG+GHLN+KS+LLQ SVEHS GQ VRL
Sbjct: 233 SASLFSASGFCGQPADATLASEEKMFAVGTVACDGEGHLNEKSILLQGSVEHSRGQCVRL 292
Query: 285 DLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIH 344
DL L FSLFPGQVVGIEG NPSGHC +ASKL D IP+ VDA + + KQA+D E +
Sbjct: 293 DLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLFDSIPVSVDA--QLPSAKKQAIDNESN 350
Query: 345 STV---VISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEH 401
+SR +S IIAAGP+TTTDN+ FEPL+EL+SYA RK PQLLIL+GPF+DS+H
Sbjct: 351 QNSDAGTLSR--ALSSIIAAGPYTTTDNMLFEPLQELLSYACRKPPQLLILMGPFIDSDH 408
Query: 402 PQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ 461
P IKKGT D SF +IFH E+LR++QD+ +Y+G+ VR IL+PS+RDA+HDFV PQP FD+
Sbjct: 409 PDIKKGTIDQSFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPAFDLN 468
Query: 462 -PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
D HQITSL NP F +N+I GCCTVD+LKQLSG+E+SR G DR+ +
Sbjct: 469 LLEDTTHQITSLANPCLFGSNEINFGCCTVDILKQLSGQEISRKPPGGKPGDRIGRLASH 528
Query: 521 ISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNE 580
I +YPLYPPA G+PLD SLA+EAL I + PD+++LPSD+ F+KVLSLG E
Sbjct: 529 ILKQQS---YYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLG---E 582
Query: 581 G-EEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
G ++ ++ +CVNPGRLAKG G GTF E+YY+ + NASII I
Sbjct: 583 GSDDDRRFICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 626
>gi|218186644|gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/648 (52%), Positives = 439/648 (67%), Gaps = 48/648 (7%)
Query: 1 MEEEIKAEFQKNGFNF--VDEG---EVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+AEF+ +GF+ D G E+L LT+CINY + P+DLVS+WEVYYLNRQL+
Sbjct: 1 MEEEIRAEFESSGFSIGGADPGAAAEILSTLLTYCINYKMSPADLVSNWEVYYLNRQLNG 60
Query: 56 STVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDN 115
++ +DGF+ HLQNE K+ IIKEE SLHIYSS DVDM+L+ + E L TP
Sbjct: 61 LKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDMLLSSTHTD-EEGFLDTP--- 116
Query: 116 LKLYSDALDSTYKANANGYS---------SDKPSK---------LVTPFGRRTEKLVVKF 157
ST + NG S +D+PS +TPF +R K ++
Sbjct: 117 ---------STKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRVNKFTQQY 167
Query: 158 NINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNA 217
+N+ N + + + E+TED++I+R++ K+C+L V S PEPGCRFMYDR EDRFN
Sbjct: 168 VLNS-DNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQHSQPEPGCRFMYDRIEDRFNY 226
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHS 277
LE+RIR+ + +SGL EP D T+AS+ ++F+VGM+ CDG+GHLN+KS+LLQ SVEHS
Sbjct: 227 LEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEGHLNEKSILLQGSVEHS 286
Query: 278 GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQ 337
GQRVRLDL + FSLFPGQVVGI+G NPSGHC + SKL D IP VDA + + KQ
Sbjct: 287 RGQRVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDA--QLPRAKKQ 344
Query: 338 ALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF 396
A+D E S+ V+SR +S +IAAGP+TT+DNL FEPL+ELISYA RKQPQLLIL+GPF
Sbjct: 345 AVDSEGNQSSDVVSR--VLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPF 402
Query: 397 VDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQP 456
+DS+HP+IKKG D SF +IF EILR+LQD+ +Y+G VR IL+PS+RDA+HDFV PQP
Sbjct: 403 IDSDHPEIKKGAVDQSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQP 462
Query: 457 PFDIQ-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRME 515
FD+ P DI HQIT L NP F N+I GCCT+D+LK LSGEE+SR DR+
Sbjct: 463 AFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIG 522
Query: 516 IYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSL 575
I +YPLYPP G+PLDFSLA AL I++ PD+++LPSD+ F+KVLSL
Sbjct: 523 RICTHILKQQS---YYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSL 579
Query: 576 GGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
EE K+ +C+NPGRLAKG G GTF E+ Y+ + +AS+I I
Sbjct: 580 D--ESSEEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 625
>gi|222616877|gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 339/648 (52%), Positives = 438/648 (67%), Gaps = 48/648 (7%)
Query: 1 MEEEIKAEFQKNGFNF--VDEG---EVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+AEF+ +GF+ D G E+L LT+CINY + P+DLVS+WEVYYLNRQL+
Sbjct: 1 MEEEIRAEFESSGFSIGCADPGAAAEILSTLLTYCINYKMSPADLVSNWEVYYLNRQLNG 60
Query: 56 STVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDN 115
++ +DGF+ HLQNE K+ IIKEE SLHIYSS DVDM+L+ + E L TP
Sbjct: 61 LKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDMLLSSTHTD-EEGFLDTP--- 116
Query: 116 LKLYSDALDSTYKANANGYS---------SDKPSK---------LVTPFGRRTEKLVVKF 157
ST + NG S +D+PS +TPF +R K ++
Sbjct: 117 ---------STKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRVNKFTQQY 167
Query: 158 NINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNA 217
+N+ N + + + E+TED++I+R++ K+C+L V S PEPGCRFMYDR EDRFN
Sbjct: 168 VLNS-DNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQRSQPEPGCRFMYDRIEDRFNY 226
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHS 277
LE+RIR+ + +SGL EP D T+AS+ ++F+VGM+ CDG+GHLN+KS+LLQ SVEHS
Sbjct: 227 LEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEGHLNEKSILLQGSVEHS 286
Query: 278 GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQ 337
GQ VRLDL + FSLFPGQVVGI+G NPSGHC + SKL D IP VDA + + KQ
Sbjct: 287 RGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDA--QLPRAKKQ 344
Query: 338 ALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF 396
A+D E S+ V+SR +S +IAAGP+TT+DNL FEPL+ELISYA RKQPQLLIL+GPF
Sbjct: 345 AVDSEGNQSSDVVSR--VLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPF 402
Query: 397 VDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQP 456
+DS+HP+IKKG D SF +IF EILR+LQD+ +Y+G VR IL+PS+RDA+HDFV PQP
Sbjct: 403 IDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQP 462
Query: 457 PFDIQ-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRME 515
FD+ P DI HQIT L NP F N+I GCCT+D+LK LSGEE+SR DR+
Sbjct: 463 AFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIG 522
Query: 516 IYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSL 575
I +YPLYPP G+PLDFSLA AL I++ PD+++LPSD+ F+KVLSL
Sbjct: 523 RICTHILKQQS---YYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSL 579
Query: 576 GGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
EE K+ +C+NPGRLAKG G GTF E+ Y+ + +AS+I I
Sbjct: 580 D--ESSEEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 625
>gi|388504218|gb|AFK40175.1| unknown [Medicago truncatula]
Length = 447
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/422 (62%), Positives = 331/422 (78%), Gaps = 6/422 (1%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
M+EEIK+EF+K GF+F +E E+L K LTFCINY+L PSDLVSSWEVYYLNRQLDE V++
Sbjct: 1 MKEEIKSEFKKAGFDFDEEEEILSKRLTFCINYSLTPSDLVSSWEVYYLNRQLDEPIVQN 60
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYS 120
EM+GFMLHLQN K+ IIKEE LH+YS DV+MILND+D +D TP +N +
Sbjct: 61 AEMEGFMLHLQNNVKDDIIKEETGLHLYSIGDVEMILNDDD--TKDDTPSTPTNNRQDVY 118
Query: 121 DALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDD 180
+ T N +S KP+ LVTPF +RT++ VKF+IN +P+ ENG E + EN E+D
Sbjct: 119 SPIHDTPSLYGNILASGKPADLVTPFSKRTDRFAVKFSINTIPDVENGKQELNHENEEND 178
Query: 181 ---IIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEE 237
I+ +I + K+CSL++HGSGP+PGCRFMYDRTED+ NA+ENRI+KHA ALV+SGLYEE
Sbjct: 179 EYNIVSKIVSRKRCSLVIHGSGPKPGCRFMYDRTEDKINAIENRIKKHARALVASGLYEE 238
Query: 238 PTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
PTDP++AS R+ F++GMICCDG+G LN+KSV+LQSS+EHSGG+ VRLDL +L +S+FPG
Sbjct: 239 PTDPSIASPRSFFSIGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSVFPG 298
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
QVVGI G NPSGHCL+ASKLVD IP V A D++PS KQA+D+E T ++ E+SM
Sbjct: 299 QVVGIGGHNPSGHCLVASKLVDYIPTSV-AKEDLNPSKKQAIDKENQPTELLCNQRELSM 357
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
IIAAGPFTTTDNL+FEPL EL++YAKR+ PQLL+LLGPF+DSEHP IKKGT D FDEIF
Sbjct: 358 IIAAGPFTTTDNLFFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDRDFDEIF 417
Query: 418 HL 419
Sbjct: 418 RF 419
>gi|413916525|gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/514 (53%), Positives = 352/514 (68%), Gaps = 22/514 (4%)
Query: 115 NLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDD 174
N L + +D + GY +K P G +L + +N + G
Sbjct: 55 NRLLSNSHVDEAAFHDTPGYEQEK-----APEGSSISELTPLYVLN--ADNAVGVPSKSA 107
Query: 175 ENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGL 234
E TED+II+R++ ++C L V S PEPGCRFMYDR EDRFN LE+RIRK A+ +SG
Sbjct: 108 EITEDEIIRRVQPSQRCYLQVQRSQPEPGCRFMYDRMEDRFNYLEDRIRKSASLFSASGF 167
Query: 235 YEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSL 294
+P D T+AS+ +FAVG + CDG+GHLN+KS+LLQ SVEHS GQ VRLDL L FSL
Sbjct: 168 CGQPADATLASEEKMFAVGTVACDGEGHLNEKSILLQGSVEHSRGQCVRLDLKDLDHFSL 227
Query: 295 FPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTV---VISR 351
FPGQVVGIEG NPSGHC +ASKL D IP+ VDA + + KQA+D E + +SR
Sbjct: 228 FPGQVVGIEGHNPSGHCFVASKLFDSIPVSVDA--QLPSAKKQAIDNESNQNSDAGTLSR 285
Query: 352 PEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS 411
+S IIAAGP+TTTDN+ FEPL+EL+SYA RK PQLLIL+GPF+DS+HP IKKGT D
Sbjct: 286 --ALSSIIAAGPYTTTDNMLFEPLQELLSYACRKPPQLLILMGPFIDSDHPDIKKGTIDQ 343
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ-PPDIIHQIT 470
SF +IFH E+LR++QD+ +Y+G+ VR IL+PS+RDA+HDFV PQP FD+ D HQIT
Sbjct: 344 SFHDIFHFEVLRKIQDFTQYLGNTVRVILIPSVRDAHHDFVFPQPAFDLNLLEDTTHQIT 403
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF 530
SL NP F +N+I GCCTVD+LKQLSG+E+SR G DR+ + I +
Sbjct: 404 SLANPCLFGSNEINFGCCTVDILKQLSGQEISRKPPGGKPGDRIGRLASHILKQQS---Y 460
Query: 531 YPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEG-EEQKKCVC 589
YPLYPPA G+PLD SLA+EAL I + PD+++LPSD+ F+KVLSLG EG ++ ++ +C
Sbjct: 461 YPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLG---EGSDDDRRFIC 517
Query: 590 VNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
VNPGRLAKG G GTF E+YY+ + NASII I
Sbjct: 518 VNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 551
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Query: 1 MEEEIKAEFQKNGFNF-----VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE 55
MEEEI+ EFQ NGF+ D ++L LT+CINY + P+DLVS+WEVYYLNR L
Sbjct: 1 MEEEIRKEFQSNGFSIGGAGPEDAAQILSTLLTYCINYKMSPADLVSNWEVYYLNRLLSN 60
Query: 56 STVKD 60
S V +
Sbjct: 61 SHVDE 65
>gi|168039083|ref|XP_001772028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676629|gb|EDQ63109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 635
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/629 (42%), Positives = 377/629 (59%), Gaps = 41/629 (6%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
ME++I+ EF N F D+ E +KC + C+++ ++P VS WE++YLN+QLD V
Sbjct: 3 MEDQIRTEFLNNNFTLEDD-ETAEKCASLCMSFGMEPEMFVSKWELFYLNQQLDGVQVLK 61
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLK--- 117
+D F L+ ++ E+ K + LH Y+ DVDM +L P N +
Sbjct: 62 ANLDSFKQFLERDKIESFRKRQTGLHYYTRDDVDMY-----------VLRIPSCNERPTS 110
Query: 118 -LYSDALDST---YKANANGYSSDKPSKLV-----TPFGRRTEKLVVKFNINNLPNTENG 168
Y D ++ T + + G+S P+ + TPF RR +K V+ N+ + E
Sbjct: 111 GSYVDPMELTPPPFASKNRGFSLHTPADVSLKPSDTPFQRRVKKFNVQSTFNDHLSFE-A 169
Query: 169 CIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANA 228
E + +DDI+KR+K ++C + V +GPEPG R+M+D+TE+RF A++ RI+ A
Sbjct: 170 SEEAVSNSGDDDILKRLKPVRRCEVDVVRTGPEPGIRYMFDQTENRFGAVDRRIQNFAKV 229
Query: 229 LVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHK 288
L + V+SQ + VG ICCD +GHLND S+LL+ SVEHS GQRVRLDL
Sbjct: 230 LEERLQRKMNDHVAVSSQEKVMVVGRICCDAEGHLNDNSILLEGSVEHSNGQRVRLDLRN 289
Query: 289 LGEFSLFPGQVV-GIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTV 347
+ FS FPGQVV G+EG NPSG CL+A+++ D IP+ ++ P K+ S
Sbjct: 290 IPRFSFFPGQVVLGVEGQNPSGFCLMATRIFDSIPVSSSSLKSDEPPTKRRTSSRDPSD- 348
Query: 348 VISRPEEISMIIAA-GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKK 406
S P + + I+AA GPFTT DNL +EPL EL +YAK+ +P LLIL+GPFVDSEHPQIK+
Sbjct: 349 --SEPRQYTRIVAAAGPFTTNDNLAYEPLVELFAYAKKVRPNLLILMGPFVDSEHPQIKQ 406
Query: 407 GTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDI-QPPDI 465
GT F IF EI R++DY E MG R +LVPS RDA+HD + PQPPFD + D
Sbjct: 407 GTVGKLFSHIFQEEIRMRVEDYCEEMGDGCRIVLVPSHRDAHHDLIFPQPPFDADEFEDP 466
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMG 525
HQIT L+NPG + +++ VG CT D+L+ LS EE+SR + G S+DRM + S +
Sbjct: 467 NHQITLLSNPGVLKVDEVTVGFCTTDILRHLSSEEVSRVPQ-GASSDRMTRLA---SHLL 522
Query: 526 PAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGG------RN 579
FYPL+PP + +PLD S+A E+L +S+ PDI++L S++ F+KVLSL
Sbjct: 523 SQRSFYPLFPPPQSVPLDLSVAPESLDLSSSPDILLLSSNLAPFVKVLSLPADIQRQENR 582
Query: 580 EGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
E E+ KC+C+NPG A+G GTF EI+
Sbjct: 583 EKVEKVKCICINPGYAARGMSGGTFTEIH 611
>gi|115487992|ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial [Oryza sativa Japonica Group]
Length = 400
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/408 (56%), Positives = 293/408 (71%), Gaps = 11/408 (2%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHS 277
LE+RIR+ + +SGL EP D T+AS+ ++F+VGM+ CDG+GHLN+KS+LLQ SVEHS
Sbjct: 2 LEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEGHLNEKSILLQGSVEHS 61
Query: 278 GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQ 337
GQ VRLDL + FSLFPGQVVGI+G NPSGHC + SKL D IP VDA + + KQ
Sbjct: 62 RGQHVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDA--QLPRAKKQ 119
Query: 338 ALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF 396
A+D E S+ V+SR +S +IAAGP+TT+DNL FEPL+ELISYA RKQPQLLIL+GPF
Sbjct: 120 AVDSEGNQSSDVVSR--VLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPF 177
Query: 397 VDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQP 456
+DS+HP+IKKG D SF +IF EILR+LQD+ +Y+G VR IL+PS+RDA+HDFV PQP
Sbjct: 178 IDSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQP 237
Query: 457 PFDIQ-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRME 515
FD+ P DI HQIT L NP F N+I GCCT+D+LK LSGEE+SR DR+
Sbjct: 238 AFDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIG 297
Query: 516 IYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSL 575
I +YPLYPP G+PLDFSLA AL I++ PD+++LPSD+ F+KVLSL
Sbjct: 298 RICTHILKQQS---YYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSL 354
Query: 576 GGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
EE K+ +C+NPGRLAKG G GTF E+ Y+ + +AS+I I
Sbjct: 355 D--ESSEEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 400
>gi|302794414|ref|XP_002978971.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
gi|300153289|gb|EFJ19928.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
Length = 590
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/589 (40%), Positives = 348/589 (59%), Gaps = 33/589 (5%)
Query: 27 LTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLH 86
++ C ++ LKPS LV WEV+YLN QL+++T+ + +D F + LQ +Q+ I+E +H
Sbjct: 1 VSLCSSFGLKPSTLVEHWEVFYLNSQLEKNTLLNSHIDKFRVFLQTQQRNDFIREHGGMH 60
Query: 87 IYSSKDVDMILNDE----DENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDKPSKL 142
IY+ D+D + D ++G + ++ Y P ++
Sbjct: 61 IYTKDDLDTFFTADAMLVDSKTPNKVVG-----------SREAQYITPPQPRVKVTPRQV 109
Query: 143 ---VTPFGRRTEKLVVKFNINN-LPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGS 198
TPF +RT K V+F N+ LP+ + ++ D + +ED +++++K ++C L +
Sbjct: 110 PSPTTPFSQRTTKCTVQFVFNDHLPDASSSAVD-DIQQSEDLVLRKLKDVRRCQLEELST 168
Query: 199 GPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD 258
G +PGCR+M D+ E RFN LE RI+K A ASQ + VG +C D
Sbjct: 169 GLKPGCRYMADQVESRFNELERRIKKFVQAFSEYESVPLSQHVAYASQEKILVVGRVCYD 228
Query: 259 GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
+ + +VLL+ SVE+SGG RVRLDL ++ +FSLFPGQ++ +EG NPSGHCL+AS++
Sbjct: 229 TE-EADPNAVLLEGSVEYSGGHRVRLDLREISQFSLFPGQILVVEGHNPSGHCLVASRIF 287
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
+PLP + D +P K+ Q + TV P+ + MI+A+GPFTT+DNL FEPL EL
Sbjct: 288 YSLPLPPHSAPDDNPLAKR---QATNLTVKTQTPQPLHMIVASGPFTTSDNLSFEPLMEL 344
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRA 438
++YA+ K+P +L+L+GPFVD+EHP +K+G TD +F EI RL+DY +++G+ R
Sbjct: 345 LAYARNKRPNVLLLMGPFVDAEHPHVKQGITDRVLSHVFQEEITTRLEDYCQFLGAGARV 404
Query: 439 ILVPSIRDANHDFVLPQPPFD-IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
IL+PS RD HD + PQPPF+ D QI+ L NP F +++ +GCCT D+L+ LS
Sbjct: 405 ILIPSTRDVFHDRIFPQPPFNSFMFEDSSQQISLLPNPSVFRLDEVSIGCCTTDILRHLS 464
Query: 498 GEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIP 557
EE +R + GTS+DRM L L+G FYPL+PPA G LD ++ AL + P
Sbjct: 465 SEEAAR-NPPGTSSDRMS--RLGAQLVG-QRSFYPLFPPALGTCLDLAVNPSALDLPCTP 520
Query: 558 DIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
DII+L SD+ F+KV S E + VNPGRLAKG GTF E
Sbjct: 521 DIIVLSSDLVPFVKVES----QPRTENLTTLLVNPGRLAKGAMGGTFVE 565
>gi|302824727|ref|XP_002994004.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
gi|300138166|gb|EFJ04944.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
Length = 590
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/589 (40%), Positives = 347/589 (58%), Gaps = 33/589 (5%)
Query: 27 LTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLH 86
++ C ++ LKPS LV WEV+YLN QL+++T+ + +D F + LQ +Q+ I+E +H
Sbjct: 1 VSLCSSFGLKPSTLVEHWEVFYLNSQLEKNTLLNSHIDKFRVFLQTQQRNDFIREHGGVH 60
Query: 87 IYSSKDVDMILNDE----DENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDKPSKL 142
IY+ D+D + D ++G + ++ Y P ++
Sbjct: 61 IYTKDDLDTFFTGDAMLVDSKTPNKVVG-----------SREAQYITPPQPRVKVTPRQV 109
Query: 143 ---VTPFGRRTEKLVVKFNINN-LPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGS 198
TPF +RT K V+F N+ LP+ + ++ D + +ED +++++K ++C L +
Sbjct: 110 PSPTTPFSQRTTKCTVQFVFNDHLPDASSSAVD-DIQQSEDLVLRKLKDVRRCQLEELST 168
Query: 199 GPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD 258
G +PGCR+M D+ E RFN LE RI+K A ASQ + VG +C D
Sbjct: 169 GLKPGCRYMADQVESRFNELERRIKKFVQAFSEYESVPLSQHVAYASQEKILVVGRVCYD 228
Query: 259 GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
+ + +VLL+ SVE+SGG RVRLDL ++ +FSLFPGQ++ +EG NPSGHCL+AS++
Sbjct: 229 TE-EADPNAVLLEGSVEYSGGHRVRLDLREISQFSLFPGQILVVEGHNPSGHCLVASRIF 287
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
+PLP + D +P K+ Q TV P+ + MI+A+GPFTT+DNL FEPL EL
Sbjct: 288 YSLPLPPHSAPDDNPLAKR---QATDLTVKTQTPQPLHMIVASGPFTTSDNLSFEPLMEL 344
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRA 438
++YA+ K+P +L+L+GPFVD+EHP +K+G TD +F EI RL+DY +++G+ R
Sbjct: 345 LAYARNKRPNVLLLMGPFVDAEHPHVKQGITDRVLSHVFQEEITTRLEDYCQFLGAGARV 404
Query: 439 ILVPSIRDANHDFVLPQPPFD-IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
IL+PS RD HD + PQPPF+ D QI+ L NP F +++ +GCCT D+L+ LS
Sbjct: 405 ILIPSTRDVFHDRIFPQPPFNSFMFEDSSQQISLLPNPSVFRLDEVSIGCCTTDILRHLS 464
Query: 498 GEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIP 557
EE +R + GTS+DRM L L+G FYPL+PPA G LD ++ AL + P
Sbjct: 465 SEEAAR-NPPGTSSDRMS--RLGAQLVGQR-SFYPLFPPALGTCLDLAVNPSALDLPCTP 520
Query: 558 DIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
DII+L SD+ F+KV S E + VNPGRLAKG GTF E
Sbjct: 521 DIIVLSSDLVPFVKVES----QPRTENLTTLLVNPGRLAKGAMGGTFVE 565
>gi|108862394|gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
gi|215693905|dbj|BAG89104.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/377 (57%), Positives = 272/377 (72%), Gaps = 11/377 (2%)
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+F+VGM+ CDG+GHLN+KS+LLQ SVEHS GQ VRLDL + FSLFPGQVVGI+G NPS
Sbjct: 1 MFSVGMVICDGEGHLNEKSILLQGSVEHSRGQHVRLDLKDVDRFSLFPGQVVGIQGHNPS 60
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQE-IHSTVVISRPEEISMIIAAGPFTTT 367
GHC + SKL D IP VDA + + KQA+D E S+ V+SR +S +IAAGP+TT+
Sbjct: 61 GHCFVVSKLNDSIPNFVDA--QLPRAKKQAVDSEGNQSSDVVSR--VLSSVIAAGPYTTS 116
Query: 368 DNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQD 427
DNL FEPL+ELISYA RKQPQLLIL+GPF+DS+HP+IKKG D SF +IF EILR+LQD
Sbjct: 117 DNLLFEPLQELISYASRKQPQLLILMGPFIDSDHPEIKKGAVDKSFQDIFLFEILRKLQD 176
Query: 428 YVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ-PPDIIHQITSLTNPGTFEANQIKVG 486
+ +Y+G VR IL+PS+RDA+HDFV PQP FD+ P DI HQIT L NP F N+I G
Sbjct: 177 FTQYLGHNVRVILIPSVRDAHHDFVFPQPAFDLNLPEDITHQITCLANPSLFSCNEIHFG 236
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSL 546
CCT+D+LK LSGEE+SR DR+ I +YPLYPP G+PLDFSL
Sbjct: 237 CCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQS---YYPLYPPPAGVPLDFSL 293
Query: 547 AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
A AL I++ PD+++LPSD+ F+KVLSL EE K+ +C+NPGRLAKG G GTF E
Sbjct: 294 ANGALEIASAPDVLLLPSDLAPFVKVLSLD--ESSEEPKRFICMNPGRLAKGIGGGTFVE 351
Query: 607 IYYHGSPEMMNASIISI 623
+ Y+ + +AS+I I
Sbjct: 352 LNYNEDTDKTSASLIRI 368
>gi|343173000|gb|AEL99203.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/315 (60%), Positives = 240/315 (76%), Gaps = 1/315 (0%)
Query: 92 DVDMILNDEDENIAEDILGTPPDN-LKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRT 150
DVDMILNDE E+ IL TP D Y D DS ++AN + S+ K S +VTPFG+RT
Sbjct: 1 DVDMILNDEQEDTKIGILDTPTDRPSSQYDDLGDSRFRANRSVLSTSKQSSIVTPFGQRT 60
Query: 151 EKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDR 210
K V++F + P E G IE +DE +ED +I+ + K+CSL++ GS PEP CR+MYDR
Sbjct: 61 NKFVIQFKTRSEPIEETGKIEGEDEISEDQVIRTAQPKKRCSLLIRGSKPEPACRYMYDR 120
Query: 211 TEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLL 270
TED+FN LE RI KHA+A V G YE P DPTVASQ+++FAVGMICCDG+G LN+KSVLL
Sbjct: 121 TEDKFNFLETRIVKHASAFVDCGQYEGPVDPTVASQKSIFAVGMICCDGEGRLNEKSVLL 180
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD 330
QSSVEHSGGQRVRL+L KL ++++FPGQV+GI G NPSGHCL+ASK+ D IP P + D
Sbjct: 181 QSSVEHSGGQRVRLELEKLSQYTIFPGQVIGIVGDNPSGHCLVASKVDDLIPFPASSDCD 240
Query: 331 VHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLL 390
+HP +QA+D++ ++ P E+S+IIAAGPFTTTDNL+FEPL EL++YA RKQPQLL
Sbjct: 241 LHPVKRQAVDEDGLPSLQSPAPSELSVIIAAGPFTTTDNLFFEPLSELLAYASRKQPQLL 300
Query: 391 ILLGPFVDSEHPQIK 405
ILLGPFVDSEHP+I+
Sbjct: 301 ILLGPFVDSEHPEIR 315
>gi|343173002|gb|AEL99204.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 315
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/315 (60%), Positives = 237/315 (75%), Gaps = 1/315 (0%)
Query: 92 DVDMILNDEDENIAEDILGTPPDN-LKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRT 150
DVDMILNDE E+ IL TP D Y D DS ++AN + S+ K S + TPFG+RT
Sbjct: 1 DVDMILNDEQEDTKIGILDTPTDRPSSQYDDLGDSRFRANGSVLSTSKQSSIGTPFGQRT 60
Query: 151 EKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDR 210
K V++F + P E G IE +DE +ED +I+ + K+CSL++ GS PEP CR+MYDR
Sbjct: 61 NKFVIQFKTRSEPIEETGKIEGEDEISEDQVIRTAQPKKRCSLLIRGSKPEPACRYMYDR 120
Query: 211 TEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLL 270
TED+FN LE I KHA+A V G YE P DPTVASQ+++FAVGMICCDG+G LN+KSVLL
Sbjct: 121 TEDKFNFLETCIVKHASAFVDCGQYEGPVDPTVASQKSIFAVGMICCDGEGRLNEKSVLL 180
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD 330
QSSVEHSGGQRVRL+L KL ++++FPGQV+GI G NPSGHCL+ASK+ D IP P + D
Sbjct: 181 QSSVEHSGGQRVRLELEKLSQYTIFPGQVIGIVGDNPSGHCLVASKVEDLIPFPASSDCD 240
Query: 331 VHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLL 390
+HP +QALD++ ++ E+S+IIAAGPFTTTDNL+FEPL EL++YA RKQPQLL
Sbjct: 241 LHPVKRQALDEDGLPSLQSPALSELSVIIAAGPFTTTDNLFFEPLSELLAYASRKQPQLL 300
Query: 391 ILLGPFVDSEHPQIK 405
ILLGPFVDSEHP+I+
Sbjct: 301 ILLGPFVDSEHPEIR 315
>gi|108862395|gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
Length = 339
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 245/347 (70%), Gaps = 11/347 (3%)
Query: 279 GQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQA 338
GQ VRLDL + FSLFPGQVVGI+G NPSGHC + SKL D IP VDA + + KQA
Sbjct: 2 GQHVRLDLKDVDRFSLFPGQVVGIQGHNPSGHCFVVSKLNDSIPNFVDA--QLPRAKKQA 59
Query: 339 LDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFV 397
+D E S+ V+SR +S +IAAGP+TT+DNL FEPL+ELISYA RKQPQLLIL+GPF+
Sbjct: 60 VDSEGNQSSDVVSR--VLSSVIAAGPYTTSDNLLFEPLQELISYASRKQPQLLILMGPFI 117
Query: 398 DSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPP 457
DS+HP+IKKG D SF +IF EILR+LQD+ +Y+G VR IL+PS+RDA+HDFV PQP
Sbjct: 118 DSDHPEIKKGAVDKSFQDIFLFEILRKLQDFTQYLGHNVRVILIPSVRDAHHDFVFPQPA 177
Query: 458 FDIQ-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEI 516
FD+ P DI HQIT L NP F N+I GCCT+D+LK LSGEE+SR DR+
Sbjct: 178 FDLNLPEDITHQITCLANPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGR 237
Query: 517 YSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLG 576
I +YPLYPP G+PLDFSLA AL I++ PD+++LPSD+ F+KVLSL
Sbjct: 238 ICTHILKQQS---YYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLD 294
Query: 577 GRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIISI 623
EE K+ +C+NPGRLAKG G GTF E+ Y+ + +AS+I I
Sbjct: 295 --ESSEEPKRFICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 339
>gi|255086299|ref|XP_002509116.1| DNA polymerase [Micromonas sp. RCC299]
gi|226524394|gb|ACO70374.1| DNA polymerase [Micromonas sp. RCC299]
Length = 658
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 234/442 (52%), Gaps = 60/442 (13%)
Query: 205 RFMYDRTEDRFNALENRI-------RKHANALVSSGLYEEPTDPTVASQRTLFAVGMICC 257
RFM DR D+ + LE+RI + A S +Y ASQ + VG + C
Sbjct: 223 RFMRDRIGDKVDMLESRIGDFRRETERVTGADASRAVY-------AASQDDVTVVGRVVC 275
Query: 258 DGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKL 317
D +G LN+ SV L+ + +S G RVRL+L + FSLFPGQ+V + G+NPSGHCL+A +
Sbjct: 276 DSEGRLNEASVQLEGDMANSAGMRVRLELRDVPSFSLFPGQIVRVTGANPSGHCLVAKSI 335
Query: 318 VDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKE 377
V P P+ A P+ A + S++IA+GPFT + +L FEP +
Sbjct: 336 VAHAPPPMCA----SPASSPAFGAQ-------------SVVIASGPFTCSSDLSFEPFAD 378
Query: 378 LISYAKRKQPQLLILLGPFVDSEHPQIK-KGTTDSSFDEIFHLEILRRLQDYV---EYMG 433
L+ Y + K+P ++L GPFVD +H ++ D SF+++F + + RL ++ E G
Sbjct: 379 LLRYCEDKRPDSVVLCGPFVDCDHRVVRGDAGVDVSFEKVFEVGVRDRLAEFASRCEAGG 438
Query: 434 SEVRAILVPSIRDANHDFVLPQPPFDIQP-------PDIIH--------QITSLTNPGTF 478
+LVPS+RDA D V PQPP +I PD + + NPGTF
Sbjct: 439 YAPNVVLVPSVRDAVADPVFPQPPLEIDTLGLDALLPDGRSDGKKGAGVDVIATPNPGTF 498
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSR---CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
N ++V CT DVL+ LS E +R S G S+DRM + + A YPL+P
Sbjct: 499 TINGVRVAVCTHDVLRHLSAAEAAREDKSSGAGPSSDRMARLASHLPGQRSA---YPLFP 555
Query: 536 PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGG--RNEGEEQKKCVCVNPG 593
PA G LD SLA L + PD+++LPSD++ F KV G + G++ + V +NPG
Sbjct: 556 PAHGACLDASLASH-LAMEKTPDVLVLPSDLQPFAKVCECPGLRGDGGDDDARFVAINPG 614
Query: 594 RLAKGEGSGTFAEIYY-HGSPE 614
RLAKG GT A +Y G+PE
Sbjct: 615 RLAKGNIGGTLAHVYVSEGAPE 636
>gi|432877683|ref|XP_004073218.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryzias latipes]
Length = 603
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 315/622 (50%), Gaps = 86/622 (13%)
Query: 18 DEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLN--RQLDESTVKDDEMDGFMLHLQNEQK 75
++ VL++ + CI + ++ D+V W Y + L +T++ E + +L+ +N+ K
Sbjct: 21 EDDSVLERMVEQCICHRIQEDDMVCEWMAYNSRNPKPLTMNTLEQFEHE--VLNKRNKFK 78
Query: 76 EAIIKEEP---SLHIYSSKDVDMILNDEDENIAEDI-----------LGTPPDNLKLYSD 121
+ KEEP ++ I + +D+ + +E+EN+ + L TP S
Sbjct: 79 SGLKKEEPYNKTMDINTLQDI-IKAEEEEENLLDSYSTPAKGSQKRPLTTPEHPQSKRSA 137
Query: 122 AL---------DSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEH 172
AL +++ ANA PS+ G + E +VV F G
Sbjct: 138 ALLASPGLLLSPASFSANAT------PSQKYNQRGAKGE-VVVTFGATQ------GTRWA 184
Query: 173 DDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSS 232
+N + G + SL H S +FM+ R D N L +I + S
Sbjct: 185 GRKNPAAGVQVDFLEGPEDSL--HSS-----YKFMFQRLRDVRNVLAEKIEDLGETVRSH 237
Query: 233 GLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEF 292
EE ++ +Q ++ G ICCD +G LN +SVLL++ EH GGQ+V +DL +L E+
Sbjct: 238 FHIEEFASVSLPAQDSITVSGQICCDSNGKLNAQSVLLEAGPEH-GGQQVAVDLSELKEY 296
Query: 293 SLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP 352
SLFPGQVV +EG N +G L+ASK+ + +PLP + +K D+ ++ P
Sbjct: 297 SLFPGQVVVMEGMNTTGKKLVASKIYEGVPLPFYS-----SDIKTEADE-------VAEP 344
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSS 412
+++++A GP+T +D+L F+PL +LIS R +P + ++LGPFVDS H QI+KG +
Sbjct: 345 --LNVLVACGPYTPSDSLTFDPLLDLISVITRDRPDVCLMLGPFVDSRHEQIEKGQVTET 402
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQIT 470
F+ IF + + D +G + + VPS RD +H + PQPPF + + +IT
Sbjct: 403 FEGIFS-RCIESIVDGTRSVGCHL--VFVPSQRDVHHPLIYPQPPFTLPHLSKNQSQRIT 459
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF 530
+ +P T + + G + D+L + EE+S +G+ +DR +S + M +
Sbjct: 460 LVPDPCTLLIDGVTFGLTSTDILFHMGAEEIS----NGSGSDR---FSRILKHMLVQRSY 512
Query: 531 YPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
YPLYPPAE + +D+ Q I IPD++I+PS+++YFIK + LG CVC+
Sbjct: 513 YPLYPPAEEVNMDYEKFQSFAQIPLIPDVLIVPSELRYFIKDV-LG----------CVCL 561
Query: 591 NPGRLAKGEGSGTFAEIYYHGS 612
NPGRL KG+ GT+ + S
Sbjct: 562 NPGRLTKGQVGGTYGRLLLQRS 583
>gi|348514229|ref|XP_003444643.1| PREDICTED: DNA polymerase alpha subunit B isoform 2 [Oreochromis
niloticus]
Length = 621
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 191/649 (29%), Positives = 326/649 (50%), Gaps = 89/649 (13%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
E +KAE + + D+ VL K + CI L+ S+++ W Y +Q + T+ D
Sbjct: 7 ESLKAELEIFDIPYQDDS-VLDKMVEQCICNRLQTSEILHEWVAYSATKQGVKLTM--DT 63
Query: 63 MDGF---MLHLQNEQKEAIIKEEPSLHIYS-SKDVDMILNDEDENIAEDILGTPPDNLKL 118
++ F +L+ +++ ++ KEE S + S+ D+I +E+E D TP +
Sbjct: 64 LEQFEHEVLNKKSKSRKTSRKEEASSRMRDISRMDDLIKAEEEEEDLLDSYSTPAKGSQK 123
Query: 119 YSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTE 178
++ PS L++P F+ N P+ + + +
Sbjct: 124 RPLTTPEHPRSKRTAAPMASPSILLSP---------ASFSPNATPSQK-----YSQRGGK 169
Query: 179 DDII--------------KRIKTGKKCSLMVHGSGPEPGC----RFMYDRTEDRFNALEN 220
+++ K G + ++ GPE ++M+ R D N L
Sbjct: 170 GEVVVTFGAVQGTRWVGRKDPGAGVQVEIL---EGPEDSLNSSYKYMFQRLRDVRNVLTE 226
Query: 221 RIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQ 280
+I + L + EE + ++ +Q ++ +G ICCD +G LN +SVLL++ E GGQ
Sbjct: 227 KIEELGEGLRTHFSIEEFSPVSLPAQDSITVLGQICCDSNGKLNAQSVLLEAGPEQ-GGQ 285
Query: 281 RVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALD 340
+V +DL +L E+SLFPGQVV +EG N +G L+ASK + +PLP + +MK D
Sbjct: 286 QVPVDLSELKEYSLFPGQVVVMEGMNTTGRKLVASKFYEAVPLPFYS-----SNMKMETD 340
Query: 341 QEI-----------HSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
+++ HS+ V E +++++A GP+T +D+L F+PL +LI+ R +P +
Sbjct: 341 EDLAWNLKPSSYTPHSSFVA---EPLNVLVACGPYTPSDSLTFDPLLDLINVIVRDRPDV 397
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANH 449
+LLGPFVDS+H QI+K +F+ IF+ + + D +G ++ + VPS RD +H
Sbjct: 398 CLLLGPFVDSKHEQIEKAQVTETFENIFN-RCIESIVDGTRSVGCQL--VFVPSQRDIHH 454
Query: 450 DFVLPQPPFDIQPPDI----IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS 505
F+ PQPPF + P I ++T + +P T + + +G + D+L + EE+S C
Sbjct: 455 HFIYPQPPFSL--PHINKEQAQRVTLVPDPCTLLIDGVTIGLTSTDILIHMGPEEIS-C- 510
Query: 506 KDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSD 565
GT +D+ +S + M +YPLYPPA+ + +D+ Q + PD++++PS+
Sbjct: 511 --GTGSDK---FSRILKHMLTQRSYYPLYPPADEVNMDYEKFQSFGQMPLTPDVLVVPSE 565
Query: 566 MKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
M+YF+K + CVCVNPGRL KG+ GT+ + SP+
Sbjct: 566 MRYFVK-----------DVVGCVCVNPGRLTKGQVGGTYGRLLIQRSPQ 603
>gi|41054613|ref|NP_955875.1| DNA polymerase alpha subunit B [Danio rerio]
gi|28279175|gb|AAH45928.1| Polymerase (DNA directed), alpha 2 [Danio rerio]
Length = 599
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 235/420 (55%), Gaps = 39/420 (9%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
++M+ R D + L +I + L ++ EE ++ Q ++ +G +CCD +G LN
Sbjct: 207 KYMFQRLRDVRDVLTGKIEELGEELRTNFNIEEFAPVSLPVQDSITVLGQVCCDSNGKLN 266
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+SVLL++ E GG++V +DL +L EFSLFPGQVV +EG NPSG L+A+KL + IPLP
Sbjct: 267 AQSVLLEAGQEQ-GGRQVPVDLSELKEFSLFPGQVVVMEGMNPSGEKLVATKLYEGIPLP 325
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
P +KQ +D+ +S P + ++IA GP+T +++L ++PL +LI+ +
Sbjct: 326 FYC-----PEVKQEMDE-------VSEP--VMVMIACGPYTPSESLTYDPLLDLITIINK 371
Query: 385 KQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE-YMGSEVRAILVPS 443
+P + IL GPFVDS+H QI+K +F+ IF R + VE G+ + + VPS
Sbjct: 372 DRPDVCILFGPFVDSKHEQIEKNQVTETFETIFK----RCMDSIVEGTKGTACKLVFVPS 427
Query: 444 IRDANHDFVLPQPPFDIQ-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
RD +H ++ PQPPF++ + ++T +P T + G + D+L + EE+S
Sbjct: 428 QRDVHHHYIYPQPPFNLTISKEDTARVTLAPDPCTLLIGNVTFGLTSTDILFHMGAEEIS 487
Query: 503 RCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIIL 562
GT +R +S + M +YPLYPPAE + +D+ Q+ +S PDI++
Sbjct: 488 ----SGTGTER---FSRIMKHMLTQRSYYPLYPPAEEVNMDYDKFQQFSQMSLTPDILVA 540
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIIS 622
PS+++YFIK + CVCVNPGRL KG+ GT+ + +P ++ +S
Sbjct: 541 PSELRYFIK-----------DVIGCVCVNPGRLTKGQIGGTYGRLLIQPNPALVEGKRVS 589
>gi|348514227|ref|XP_003444642.1| PREDICTED: DNA polymerase alpha subunit B isoform 1 [Oreochromis
niloticus]
Length = 602
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 320/638 (50%), Gaps = 86/638 (13%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
E +KAE + + D+ VL K + CI L+ S+++ W Y +Q + T+ D
Sbjct: 7 ESLKAELEIFDIPYQDDS-VLDKMVEQCICNRLQTSEILHEWVAYSATKQGVKLTM--DT 63
Query: 63 MDGF---MLHLQNEQKEAIIKEEPSLHIYS-SKDVDMILNDEDENIAEDILGTPPDNLKL 118
++ F +L+ +++ ++ KEE S + S+ D+I +E+E D TP +
Sbjct: 64 LEQFEHEVLNKKSKSRKTSRKEEASSRMRDISRMDDLIKAEEEEEDLLDSYSTPAKGSQK 123
Query: 119 YSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTE 178
++ PS L++P F+ N P+ + + +
Sbjct: 124 RPLTTPEHPRSKRTAAPMASPSILLSP---------ASFSPNATPSQK-----YSQRGGK 169
Query: 179 DDII--------------KRIKTGKKCSLMVHGSGPEPGC----RFMYDRTEDRFNALEN 220
+++ K G + ++ GPE ++M+ R D N L
Sbjct: 170 GEVVVTFGAVQGTRWVGRKDPGAGVQVEIL---EGPEDSLNSSYKYMFQRLRDVRNVLTE 226
Query: 221 RIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQ 280
+I + L + EE + ++ +Q ++ +G ICCD +G LN +SVLL++ E GGQ
Sbjct: 227 KIEELGEGLRTHFSIEEFSPVSLPAQDSITVLGQICCDSNGKLNAQSVLLEAGPEQ-GGQ 285
Query: 281 RVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALD 340
+V +DL +L E+SLFPGQVV +EG N +G L+ASK + +PLP + +MK D
Sbjct: 286 QVPVDLSELKEYSLFPGQVVVMEGMNTTGRKLVASKFYEAVPLPFYS-----SNMKMETD 340
Query: 341 QEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSE 400
+E +++++A GP+T +D+L F+PL +LI+ R +P + +LLGPFVDS+
Sbjct: 341 EE-----------PLNVLVACGPYTPSDSLTFDPLLDLINVIVRDRPDVCLLLGPFVDSK 389
Query: 401 HPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDI 460
H QI+K +F+ IF+ + + D +G ++ + VPS RD +H F+ PQPPF +
Sbjct: 390 HEQIEKAQVTETFENIFN-RCIESIVDGTRSVGCQL--VFVPSQRDIHHHFIYPQPPFSL 446
Query: 461 QPPDI----IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEI 516
P I ++T + +P T + + +G + D+L + EE+S C GT +D+
Sbjct: 447 --PHINKEQAQRVTLVPDPCTLLIDGVTIGLTSTDILIHMGPEEIS-C---GTGSDK--- 497
Query: 517 YSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLG 576
+S + M +YPLYPPA+ + +D+ Q + PD++++PS+M+YF+K
Sbjct: 498 FSRILKHMLTQRSYYPLYPPADEVNMDYEKFQSFGQMPLTPDVLVVPSEMRYFVK----- 552
Query: 577 GRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
+ CVCVNPGRL KG+ GT+ + SP+
Sbjct: 553 ------DVVGCVCVNPGRLTKGQVGGTYGRLLIQRSPQ 584
>gi|41107576|gb|AAH65460.1| Pola2 protein [Danio rerio]
Length = 600
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 233/420 (55%), Gaps = 38/420 (9%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
++M+ R D + L +I + L ++ EE ++ Q ++ +G +CCD +G LN
Sbjct: 207 KYMFQRLRDVRDVLTGKIEELGEELRTNFNIEEFAPVSLPVQDSITVLGQVCCDSNGKLN 266
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+SVLL++ E GG++V +DL +L EFSLFPGQVV +EG NPSG L+A+KL + IPLP
Sbjct: 267 AQSVLLEAGQEQ-GGRQVPVDLSELKEFSLFPGQVVVMEGMNPSGEKLVATKLYEGIPLP 325
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
+V KQ +D+ E + ++IA GP+T +++L ++PL +LI+ +
Sbjct: 326 FYCPSEV----KQEMDEVC---------EPVMVMIACGPYTPSESLTYDPLLDLITIINK 372
Query: 385 KQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE-YMGSEVRAILVPS 443
+P + IL GPFVDS+H QI+K +F+ IF R + VE G+ + + VPS
Sbjct: 373 DRPDVCILFGPFVDSKHEQIEKNQVTETFETIFK----RCMDSIVEGTKGTACKLVFVPS 428
Query: 444 IRDANHDFVLPQPPFDIQ-PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
RD +H ++ PQPPF++ + ++T +P T + G + D+L + EE+S
Sbjct: 429 QRDVHHHYIYPQPPFNLTISKEDTARVTLAPDPCTLLIGNVTFGLTSTDILFHMGAEEIS 488
Query: 503 RCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIIL 562
GT +R +S + M +YPLYPPAE + +D+ Q+ +S PDI++
Sbjct: 489 ----SGTGTER---FSRIMKHMLTQRSYYPLYPPAEEVNMDYDKFQQFSQMSLTPDILLA 541
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIIS 622
PS+++YFIK + CVCVNPGRL KG+ GT+ + +P ++ +S
Sbjct: 542 PSELRYFIK-----------DVIGCVCVNPGRLTKGQIGGTYGRLLIQPNPAVVEGKRVS 590
>gi|384248689|gb|EIE22172.1| DNA polymerase alpha, subunit B [Coccomyxa subellipsoidea C-169]
Length = 552
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 230/444 (51%), Gaps = 47/444 (10%)
Query: 185 IKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA 244
+ G +C + + G G +FM +R R LE R+ AL ++ +
Sbjct: 115 VDGGPRCRVDLVRPGLRAGHKFMSNRIPSRVAFLEARMLDFCAALEAATGCPAGNPVGLP 174
Query: 245 SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
+Q VG + CD +GHLN S+LL+ +++HS G ++LD VVG+ G
Sbjct: 175 TQEAALFVGRVVCDAEGHLNANSLLLEGTLKHSQGASIKLD-------------VVGVLG 221
Query: 305 SNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
NPSG CL+A +L+ +P P + ++ + + +SM +A GPF
Sbjct: 222 LNPSGSCLVAQRLITSLPRP----------FPSSTPDDLQRFAMATGAGGVSMAVAVGPF 271
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR 424
TT+++L F PL EL+ + +P +L+L+GPFVD EH I G+ D +F+E+F ++L R
Sbjct: 272 TTSEDLEFAPLAELLGSCRASRPDVLLLIGPFVDVEHALISNGSLDITFEELFETQVLGR 331
Query: 425 LQDYVEYM-GSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQI 483
L+++VE G++V +LVPS RDA+ D V PQ F + I L NP TF N++
Sbjct: 332 LREFVEGTPGTQV--LLVPSGRDAHADPVFPQAAFPAS--GLPASIRQLPNPATFRLNEL 387
Query: 484 KVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLD 543
G + D LKQ+S +E+++ G + DRM + I G ++PLYPPA G LD
Sbjct: 388 VFGVASPDFLKQVSSQEIAK----GPTPDRMAALAGHIIGQGS---YFPLYPPAPGSMLD 440
Query: 544 FSLAQEALTISTIPDIIILPSDMKYFIKVL-----------SLGGRNEGEEQKKCVCVNP 592
SL E L + PD++ILPSD+ F K + S G +E VCVNP
Sbjct: 441 ASLGAE-LDLPCTPDVLILPSDLAAFAKSVAADKPARSGDASSGAPDERLVMGNVVCVNP 499
Query: 593 GRLAKGEGSGTFAEIYYHGSPEMM 616
GRLAK + GTFA + S E +
Sbjct: 500 GRLAKDKSGGTFARLKVGASKEGL 523
>gi|213514402|ref|NP_001133624.1| DNA polymerase subunit alpha B [Salmo salar]
gi|209154730|gb|ACI33597.1| DNA polymerase subunit alpha B [Salmo salar]
Length = 608
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 237/423 (56%), Gaps = 40/423 (9%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
++M+ R D N L +I + L ++ EE + ++ +Q ++ +G +CCD +G LN
Sbjct: 211 KYMFQRLRDVRNVLTEKIEELGEELRTNFNIEEFSPVSLPAQDSVTVLGQVCCDSNGKLN 270
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+SVLL++ + GG++V +DL +L ++SLFPGQVV +EG N SG +ASKL + +PLP
Sbjct: 271 SQSVLLEAGPDQ-GGRQVPVDLSELRDYSLFPGQVVVMEGMNTSGRKFVASKLFEGVPLP 329
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
+ +KQ +D +I PE++ +++A GP+T +D L F+PL +LI+ R
Sbjct: 330 FYST-----PIKQEIDMDIPDV-----PEQLMVMVACGPYTPSDGLTFDPLVDLINVIAR 379
Query: 385 KQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE-YMGSEVRAILVPS 443
+P + ILLGPFVDS+H QI+K +FD IF R + VE G R + VPS
Sbjct: 380 DRPDVCILLGPFVDSKHEQIEKSLVTETFDAIFS----RCVGSIVEGTKGVGCRLVFVPS 435
Query: 444 IRDANHDFVLPQPPFDIQPPDI----IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGE 499
RD +H F+ PQPPF + PD+ ++T + +P T + + G + D+L + E
Sbjct: 436 QRDVHHHFIYPQPPFIL--PDLSKDDAKRVTLVPDPCTLLIDGVTFGLTSTDILFHMGAE 493
Query: 500 EMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDI 559
E+S C+ + +DR +S + M +YPLYPP E + +D+ Q + PD+
Sbjct: 494 EIS-CA---SGSDR---FSRILKHMLTQRNYYPLYPPVEEVNMDYEKFQGYGQMPLSPDV 546
Query: 560 IILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNAS 619
+I+PS++++FIK + CVCVNPGRL KG+ GT+ + S ++
Sbjct: 547 LIVPSELRFFIK-----------DVIGCVCVNPGRLTKGQVGGTYGRLLIQRSSPSIDGK 595
Query: 620 IIS 622
+S
Sbjct: 596 RVS 598
>gi|156384823|ref|XP_001633332.1| predicted protein [Nematostella vectensis]
gi|156220400|gb|EDO41269.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 182/626 (29%), Positives = 300/626 (47%), Gaps = 66/626 (10%)
Query: 17 VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGF---MLHLQNE 73
+D+ +L K C + L S L W + ++ L++S ++ F H N+
Sbjct: 18 IDDVGILDKLKEICSSCRLNASQLCEEWVAF--SQALEDSDPTLATLEKFERKQTHEMNK 75
Query: 74 QKEA-IIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANAN 132
+ + K E + +++ +D+D +++ ED+ + D+ TP + AL +
Sbjct: 76 RVQTQFTKIEANTKMHTKEDLDDLMSAEDDIL--DMYSTPANK-----GALKRAHTTPEM 128
Query: 133 GYSSDKPSKLVTPFGRRTEKLVVKFNINNL-PNTENGCIEHDDENTEDDIIKRIKTGKKC 191
+ S TP G VV F+ + P +++ + D++ +
Sbjct: 129 AVNKRHTSVSHTPGG------VVPFSPASFSPAAATPSLKYGSRHNAGDVVCSTNPSSRQ 182
Query: 192 SLMVHGSGPE-------------PGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEP 238
G+G + ++M+ + D+ N L I + A L EE
Sbjct: 183 GTKWQGTGADIKVTYADEKIALHKNFKYMFQKQVDKENVLNEMIDEMAEKLKIQHGIEEY 242
Query: 239 TDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
T SQ + VG ICCD G LN SV+L+ S + S G++V+LDL K+ +F+LFPGQ
Sbjct: 243 AHTTSPSQGEVTVVGRICCDAVGKLNASSVMLEGSQDQSQGRQVKLDLTKVQQFALFPGQ 302
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMI 358
VV G N +G L+ ++L + + LP A +D + + + + ++
Sbjct: 303 VVAARGINSTGSKLVVNQLYEGVKLPFYASLDR------------NGENLSNSKDPFVVV 350
Query: 359 IAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFH 418
+AAGP+TT+D+L +EPL +LI ++ +P LLILLGPFVDS+H +I+ D +F+ +F
Sbjct: 351 VAAGPYTTSDSLMYEPLADLIRMVQKNKPDLLILLGPFVDSKHEKIENVDLDETFESLFK 410
Query: 419 LEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ-ITSLTNPGT 477
++ + E G+ V + PS RD +HDFV PQPPF + H+ I +++P T
Sbjct: 411 RQV-DLITQATERQGTTV--VFAPSQRDVHHDFVFPQPPFRKDTHAMDHKNIHFVSDPCT 467
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
+ +G + DVL L EE + C S+DR+ + + FYPL PP
Sbjct: 468 LLVGNVTIGLTSTDVLLNLGSEETA-CPPG--SSDRLGRL---VKHILHQHSFYPLNPPN 521
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
E + +D+ T+ PD+++LPSD++YF K + LG +CVNPGRLAK
Sbjct: 522 EEVNVDYERLSHHGTLPCSPDLLVLPSDLRYFTKNI-LGS----------LCVNPGRLAK 570
Query: 598 GEGSGTFAEIYYHGSPEMMNASIISI 623
G+ GT+A I +AS+ I
Sbjct: 571 GQVGGTYARILIQPDSSHTDASVSHI 596
>gi|303284707|ref|XP_003061644.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456974|gb|EEH54274.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 417
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 214/421 (50%), Gaps = 46/421 (10%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQ 271
E R A + + + L G ASQ + VG + CD +G LN+ SV+L+
Sbjct: 3 ESRLRAFKRAVERRYPGLDCGGAT------YAASQDDVTVVGRVVCDSEGKLNEASVMLE 56
Query: 272 SSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDV 331
SVE S G RVRL+L +L FSLFPGQ+V ++GSNPSGHCL+A +L + V
Sbjct: 57 GSVETSNGARVRLELRRLPRFSLFPGQIVCVQGSNPSGHCLVARRL----------IASV 106
Query: 332 HPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLI 391
PS + ST +S+ IA+GP+T +L +EPL E ++Y +P ++
Sbjct: 107 APS-------GVKSTASSPAFGSLSVAIASGPYTCAGDLSYEPLNEFLAYCAETRPDAVV 159
Query: 392 LLGPFVDSEHPQIKK--GTTDSSFDEIFHLEI---LRRLQDYVEYMGSEVRAILVPSIRD 446
L+GPFVD+EH ++ D SF+++F L + L R + G +++PS RD
Sbjct: 160 LMGPFVDAEHKSVRGDDAPLDVSFEDVFALRVRDALERFAADADDAGYAPSVVVMPSTRD 219
Query: 447 ANHDFVLPQPPF----DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
HD V PQPP +++ P I NPG F N + CT DVL+ LS E +
Sbjct: 220 VTHDAVFPQPPLLSERELELPRSC-AIACAPNPGVFSINGVTFAACTQDVLRHLSAAEAA 278
Query: 503 R--------CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
R G + DRM + + A YPL+P G LD SLA L +
Sbjct: 279 REPASGGAGGGAGGAAPDRMSRLAAHLPGQSSA---YPLFPAPAGACLDASLAAH-LEMD 334
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYY-HGSP 613
PD++++PSD+ F K+++ + E+ V +NPGRLAKG GT A +Y G+P
Sbjct: 335 VTPDVLLVPSDLNPFAKIVAQPAGGDDEDAPAFVALNPGRLAKGNIGGTIAHVYVTEGAP 394
Query: 614 E 614
E
Sbjct: 395 E 395
>gi|291222797|ref|XP_002731400.1| PREDICTED: MGC80532 protein-like [Saccoglossus kowalevskii]
Length = 601
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 179/649 (27%), Positives = 299/649 (46%), Gaps = 95/649 (14%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
E++ +F D +V+ K C+ + L+ S LV W + Q T+ D
Sbjct: 8 EDLSEDFATFDIELTDP-DVVDKLKELCMLHRLESSSLVDEWVAFSHTHQNINMTM--DT 64
Query: 63 MDGFMLHLQNEQ----KEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPP---DN 115
++ F N++ K + K E + H Y +D ++++++ N + TP N
Sbjct: 65 IELFERERLNKKSHKNKTPVFKRERNKHAYDINTIDQLIDNDEANDLLNAYCTPSTKGKN 124
Query: 116 LKLYSDALDSTYKANANGYSSD------KPSKLVTPFGRRTEKLVVKFNINNLPNT---- 165
+L++ ++ G S P L +P G ++K + N N+ T
Sbjct: 125 KRLHTTP-ENIQNKRLTGLSGSPAMAPFSPKSLSSPIGTPSQKYSSRNNQGNVVATFGNT 183
Query: 166 ---------ENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFN 216
+N I+H D+ E+ + IK +M+ + D+ N
Sbjct: 184 RIAWRGSGADNISIDHYDK--ENALTTNIK-------------------YMFQKYADKAN 222
Query: 217 ALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEH 276
L + I L + + E + Q + A G ICCD +G LN +SV+L+ S E
Sbjct: 223 VLNDMIEDLGYELQNGYVIENLGHVALPLQESFTAAGRICCDSNGKLNSQSVILEGSSET 282
Query: 277 SGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMK 336
S G+ V L L + E+SLFPGQ+V ++G+N +G L+ SKL + LP + + D S
Sbjct: 283 SAGKHVSL-LLNIKEYSLFPGQIVAVDGTNSTGSKLVVSKLYPGLMLPFNQIEDKESSTG 341
Query: 337 QALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF 396
+ + AGP+ T+D+L F+PL +LI +++P + IL GPF
Sbjct: 342 -----------------PLYTLTTAGPYFTSDSLSFDPLNDLIKVILKEKPDVCILFGPF 384
Query: 397 VDSEHPQIKKGT--TDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLP 454
VDS H + G TD +++E+F I+ + + S I+VPS RD +H++V P
Sbjct: 385 VDSRHEHVVNGLEGTDMTYEELFSKMIVYLTEKTSQ---SSTHLIIVPSQRDIHHEYVYP 441
Query: 455 QPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSND 512
QPP+ + P +++ +++P T N + G D+L L GEE+S T +D
Sbjct: 442 QPPYTVHDLPKQEFNRVHFVSDPCTLSINGVIFGITATDILFHLGGEEISWPV---TGSD 498
Query: 513 RMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
R+ I +YPLYPPA+ + +D+ + PD++ILPSD+++FIK
Sbjct: 499 RLARLCKHILTQ---HNYYPLYPPADEVNIDYEYFDHYAKMQVTPDVLILPSDLRFFIKD 555
Query: 573 LSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASII 621
+S CVC+NPGRL KG+ GT+ + P++ N ++
Sbjct: 556 VS-----------GCVCINPGRLTKGQIGGTYGRLLI--KPKVANNGVV 591
>gi|410913631|ref|XP_003970292.1| PREDICTED: DNA polymerase alpha subunit B-like [Takifugu rubripes]
Length = 598
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 224/405 (55%), Gaps = 40/405 (9%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
++M+ R D N L +I L S EE + ++ +Q ++ +G ICCD +G LN
Sbjct: 208 KYMFQRLRDVRNVLTEKIEVLGERLRSHFNIEEFSPVSLPAQDSITVLGQICCDSNGKLN 267
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+SVLL++ + GGQ+V ++L +L E+SLFPGQVV +EG N +G L ASKL + +PLP
Sbjct: 268 AQSVLLEAGPDQ-GGQQVPVNLSELKEYSLFPGQVVVMEGMNTTGRKLTASKLYEGVPLP 326
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
+ S +A + E +++++A GP+T +D+L F+PL +LI R
Sbjct: 327 FYT----NNSGTEATE------------EPVNILVACGPYTPSDSLTFDPLLDLIHVIAR 370
Query: 385 KQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSI 444
+P + ILLGPFVDS+H QI+K +F+ IF + + D + G ++ + VPS
Sbjct: 371 DRPDVCILLGPFVDSKHEQIEKAQVTETFEAIFS-RCMESIVDGTKSTGCQL--VFVPSQ 427
Query: 445 RDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
RD +H + PQPPF + D +IT + +P T + + G + D+L + EE+S
Sbjct: 428 RDIHHHCIYPQPPFTLPNLSKDQSQRITLVPDPCTLLIDGVTFGITSTDILFHMGAEEIS 487
Query: 503 RCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIIL 562
C GT +DR +S + M FYPLYPP E + +D+ Q + PD++IL
Sbjct: 488 -C---GTGSDR---FSRILRHMLSQRSFYPLYPPVEDVNMDYEKFQSFGQMPVTPDVLIL 540
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
PS+++YFIK + CVCVNPGRL KG GT++ +
Sbjct: 541 PSELRYFIK-----------DVIGCVCVNPGRLTKGHVGGTYSRL 574
>gi|405963161|gb|EKC28759.1| DNA polymerase alpha subunit B [Crassostrea gigas]
Length = 607
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 239/463 (51%), Gaps = 55/463 (11%)
Query: 180 DIIKRIKTGKKCSLMVH----GSGPEPG------C---RFMYDRTEDRFNALENRIRKHA 226
D K +G KC++ +H PE C ++M+ + D+ L I + A
Sbjct: 171 DNAKWSGSGNKCTIKLHDPMENMSPEEKDSVKDLCQDFKYMFQKLTDKAAVLNEMIDEMA 230
Query: 227 NALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDL 286
L EE + + Q + VG ICCD G +N KSV+L+ S + S G+ V LDL
Sbjct: 231 TQLQEKHSIEEFSHVALPVQEEVTLVGRICCDSLGKMNAKSVILEGSRDTSAGRSVPLDL 290
Query: 287 HKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHST 346
L ++SLFPGQ+V ++G+N SG + KL + VV PS DQ I S
Sbjct: 291 SDLKQYSLFPGQIVAMDGTNTSGQKFVVKKL-------YEGVVQSLPSCSNDKDQ-ISSN 342
Query: 347 VVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKK 406
+++++IAAGPF+T+DNL FEPL +L+ + ++ +P ++IL+GPFVD ++ I+
Sbjct: 343 -------DMTVLIAAGPFSTSDNLSFEPLADLVKHIRKDKPDVVILMGPFVDLKNDLIEN 395
Query: 407 GTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDII 466
G S D+IF +L++ + ++ + I++PS RD +HD+V PQPPF Q D
Sbjct: 396 GKGISPLDDIFKT----KLKEISDVASNDCQVIVLPSYRDVHHDYVYPQPPFFHQSKDSR 451
Query: 467 HQITS-------LTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSL 519
+ + + +P + N + G + DV+ QL EE+S + G S DRM +
Sbjct: 452 MKAKTDYPNVHFMPDPCVVDINNVIFGLTSSDVMFQLGAEEIS-FNPPGAS-DRMARLAE 509
Query: 520 DISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 579
+ FYPLYP E + +D+ + + + P +++LPSD+K F K +
Sbjct: 510 HLLTQQN---FYPLYPSPEDVNIDYEVFEYYARMPCTPHVLVLPSDLKQFTKDI------ 560
Query: 580 EGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASIIS 622
+ C C+NPGRLA+G+ GTF+ + G + SI+S
Sbjct: 561 -----QGCCCINPGRLARGQAGGTFSRVQVRGGAIVSQQSILS 598
>gi|426252020|ref|XP_004019717.1| PREDICTED: DNA polymerase alpha subunit B [Ovis aries]
Length = 600
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 228/424 (53%), Gaps = 47/424 (11%)
Query: 192 SLMVHGSGPEPGCR---FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP R +M+ + D L +I + + L E V +Q
Sbjct: 194 SLKVLGH-PEPLTRSYKYMFQKLPDIREVLTCKIEELGSELKEHYKIEAFAPILVPAQEP 252
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ +EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 253 VTLLGQIGCDSNGKLNHKSVILEGDLEHSSGTQIPVDLSELKEYSLFPGQVVVMEGINTT 312
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A++L + +PLP H ++ D E+ +++A GP+TT+D
Sbjct: 313 GRKLVATRLYEGVPLP------FHQPNEEDGDS-----------EQFMVLVACGPYTTSD 355
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ F+PL +LI+ R +P + IL GPF+D++H Q++ SSF+++F + LR + +
Sbjct: 356 SITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDVFK-QCLRTIIEG 414
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----ITSLTNPGTFEANQIK 484
GS + I VPS+RD +H+ V PQPPF D++ + + ++ P T N +
Sbjct: 415 TRSSGSHL--IFVPSLRDVHHEPVYPQPPFSCS--DLLREDKKRVRLVSEPCTLSINGVT 470
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
G + D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 FGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDVAIDY 524
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTF 604
+ PDI I PS+++YF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 525 ENFYLYAQLPVTPDIFIAPSELRYFVKDI-LG----------CVCVNPGRLTKGQVGGTF 573
Query: 605 AEIY 608
+Y
Sbjct: 574 GRLY 577
>gi|149725407|ref|XP_001492574.1| PREDICTED: DNA polymerase alpha subunit B [Equus caballus]
Length = 598
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 221/404 (54%), Gaps = 39/404 (9%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L RI + + L E T +Q + +G I CD +G LN K
Sbjct: 209 MFQKLPDIREVLTCRIEELGSELKEHYKIEAFTPVLAPAQEPVILLGQIGCDSNGKLNSK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPF- 327
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ P+ + D++ ++V ++A GP+TT+D++ +EPL +LI+ R +
Sbjct: 328 ----LQPTEE---DRDFEQSMV---------LVACGPYTTSDSITYEPLLDLIAIINRDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + +L GPF+D++H Q++ S F+++F + LR + + GS + + VPS+RD
Sbjct: 372 PDVCVLFGPFLDAKHEQVESCLLTSPFEDVFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC 504
+H+ V PQPPF P + ++ L+ P +F N + G + D+L + EE+S
Sbjct: 429 VHHEPVYPQPPFSYSELPQEDKKRVHFLSEPCSFSINGVIFGLTSTDLLFHMGAEEIS-- 486
Query: 505 SKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS 564
S GTS+ I ++ +YPLYPP E + +D+ + PD+ I+PS
Sbjct: 487 SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYENFYAYAQLPVTPDVFIIPS 542
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
+++YF+K + LG CVCVNPGRL KG+ GTF +Y
Sbjct: 543 ELRYFVKDI-LG----------CVCVNPGRLTKGQVGGTFGRLY 575
>gi|449663068|ref|XP_002165302.2| PREDICTED: DNA polymerase alpha subunit B-like [Hydra
magnipapillata]
Length = 605
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 177/649 (27%), Positives = 311/649 (47%), Gaps = 91/649 (14%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDE----S 56
+E+E+++EF G + VL+K C Y L+ +D+V+ W + +N+ + +
Sbjct: 5 LEKELESEFGDFGIDIEGNLAVLEKLCELCKTYKLESADIVARWMSFAVNKNAGQDISVT 64
Query: 57 TVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMI----LNDEDENIAEDILGTP 112
+++ E +L K+++ + ++Y+ ++ + +D+D+N+ E + TP
Sbjct: 65 ALEEFESKKLLLSKTPSAKKSLYQS----NVYNITTINKLEAKQYDDDDDNVIESYVTTP 120
Query: 113 ---PDNLKLYSDALDSTYKANANGYSSDK--PSKLVTPFGRRTEKLV-------VKFNIN 160
P + K +A D GY +K S + TP L KF +
Sbjct: 121 KSKPCSTKRLRNAPD--------GYLPNKKVASFISTPVNFSPSSLSPGISTPSAKFE-S 171
Query: 161 NLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCR----FMYDRTEDRFN 216
+ E C EN E + GK ++ + PE R M+ + + + +
Sbjct: 172 RVGKAEVLCTYGASENMEWKGV-----GKDVTV---NNYPEYNVRNNYKHMFQKIQIKAD 223
Query: 217 ALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEH 276
L + I +N + + + ++ + ++ L G ICCD G LN KS++L+ S E
Sbjct: 224 ILNDIITTLSNQMKQNLMIDDFDSLEIKTEDVLHITGRICCDSVGRLNSKSIVLEGSREF 283
Query: 277 SGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMK 336
S G+R+ +DL + +SLFPGQ+V + G N SG + S + LP + ++
Sbjct: 284 STGKRMPIDLSEAKNYSLFPGQIVAMSGKNISGSKFLPSTIYTGCRLPFYSAIN----KV 339
Query: 337 QALDQEIHSTVVISRPEEISMIIAAGPFTTTD--NLYFEPLKELISYAKRKQPQLLILLG 394
A+D+ ++ +A GPF+T D L + PL++L+S ++ P +L++LG
Sbjct: 340 DAIDE-----------NPFTIYVACGPFSTCDETTLSYNPLEDLLSVVLKEAPDILLMLG 388
Query: 395 PFVDSEHPQIKKGTTDSSFDEIFHL---EILRRLQDYVEYMGSEVRAILVPSIRDANHDF 451
PFVD + P I++G D +F+E+F ++L +++ + + VPS RD H F
Sbjct: 389 PFVDVKQPLIERGDIDQTFEELFQYCYHQVLAAVKNI------RTKVLFVPSQRDVFHTF 442
Query: 452 VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN 511
V PQPPF++ +I +++P T N + G + D+L L GEE+S +
Sbjct: 443 VYPQPPFEVVADG--EKIQMMSDPCTLMINDVCFGITSTDILFHLGGEEVSSYAVRSDRL 500
Query: 512 DRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
R+ + L +YPL+P +E + LD+ + + PDI++LPSD++YFIK
Sbjct: 501 GRLVDHLLQQQC------YYPLHPSSEDVNLDYEKFESYAFMPVTPDILVLPSDLRYFIK 554
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH-GSPEMMNAS 619
L EG C+C+NPGRL KG+ GTF ++ P+ +N S
Sbjct: 555 DL------EG-----CLCINPGRLVKGQTGGTFLKLLVKPRKPQNLNKS 592
>gi|348564960|ref|XP_003468272.1| PREDICTED: DNA polymerase alpha subunit B-like [Cavia porcellus]
Length = 598
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 224/422 (53%), Gaps = 43/422 (10%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP + M+ + D L +I + + L E T V +Q
Sbjct: 192 SLKVVGY-PEPLTGSYKSMFQKLTDVREVLTCKIEELGSKLKEHYQIEAFTPLLVPAQEP 250
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ EHS G +V +DL +L E+SLFPGQVV +EG N +
Sbjct: 251 ITVLGQIGCDSNGKLNSKSVILEGDREHSSGAQVPVDLSELKEYSLFPGQVVIMEGINTT 310
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A+KL + +PLP + +Q + +++A GP+TT+D
Sbjct: 311 GRKLVATKLYEGVPLPFYEPTEEDGGFEQTM-----------------VLVACGPYTTSD 353
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ ++PL +LIS +P + IL GPF+D++H Q++ S+F+++F + LR L +
Sbjct: 354 SITYDPLLDLISIINHDRPDVCILFGPFLDAKHEQVENCLVTSAFEDVFK-QCLRTLIEG 412
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVG 486
GS + + VPS+RD +H+ V PQPPF P + ++ ++ P + N + G
Sbjct: 413 TRSSGSHL--VFVPSLRDVHHEPVYPQPPFSYPDLPREDRKRVQLVSEPCSLAINGVIFG 470
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSL 546
+ D+L + EE+ CS GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 LTSTDLLFHMGAEEI--CSSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYEN 524
Query: 547 AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
+ PD+ I+PS++KYF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 525 FYAYAQLPVTPDVFIVPSELKYFVKDI-LG----------CVCVNPGRLTKGQVGGTFGR 573
Query: 607 IY 608
+Y
Sbjct: 574 LY 575
>gi|296471438|tpg|DAA13553.1| TPA: DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 229/424 (54%), Gaps = 47/424 (11%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP ++M+ + D L +I + + L E V +Q
Sbjct: 194 SLKVLGH-PEPLTGSYKYMFQKLPDIREVLTCKIEELGSELKEHYKIEAFAPILVPAQEP 252
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ +EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 253 VTLLGQIGCDSNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYSLFPGQVVVMEGINTT 312
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A++L + +PLP H ++ D E+ +++A GP+TT+D
Sbjct: 313 GRKLVATRLYEGVPLP------FHQPDEEDGDS-----------EQFMVLVACGPYTTSD 355
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ F+PL +LI+ R +P + IL GPF+D++H Q++ SSF+++F + LR + +
Sbjct: 356 SITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDVFK-QCLRTIIEG 414
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----ITSLTNPGTFEANQIK 484
GS + I+VPS+RD +H+ V PQPPF D++ + + ++ P T N +
Sbjct: 415 TRSSGSHL--IIVPSLRDVHHEPVYPQPPFSCS--DLLREDKKRVRLVSEPCTLSINGVI 470
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
G + D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 FGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILRHILTQRS----YYPLYPPQEDMAIDY 524
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTF 604
+ PD+ I PS+++YF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 525 ENFYLYAQLPVTPDVFIAPSELRYFVKDI-LG----------CVCVNPGRLTKGQVGGTF 573
Query: 605 AEIY 608
+Y
Sbjct: 574 GRLY 577
>gi|255708460|ref|NP_001019713.2| DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 229/424 (54%), Gaps = 47/424 (11%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP ++M+ + D L +I + + L E V +Q
Sbjct: 194 SLKVLGH-PEPLTGSYKYMFQKLPDIREVLTCKIEELGSELKEHYKIEAFAPILVPAQEP 252
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ +EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 253 VTLLGQIGCDSNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYSLFPGQVVVMEGINTT 312
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A++L + +PLP H ++ D E+ +++A GP+TT+D
Sbjct: 313 GRKLVATRLYEGVPLP------FHQPDEEDGDS-----------EQFMVLVACGPYTTSD 355
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ F+PL +LI+ R +P + IL GPF+D++H Q++ SSF+++F + LR + +
Sbjct: 356 SITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDVFK-QCLRTIIEG 414
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----ITSLTNPGTFEANQIK 484
GS + I+VPS+RD +H+ V PQPPF D++ + + ++ P T N +
Sbjct: 415 TRSSGSHL--IIVPSLRDVHHEPVYPQPPFSCS--DLLREDKKRVRLVSEPCTLSINGVI 470
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
G + D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 FGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILRHILTQRS----YYPLYPPQEDMAIDY 524
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTF 604
+ PD+ I PS+++YF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 525 ENFYLYAQLPVTPDVFIAPSELRYFVKDI-LG----------CVCVNPGRLTKGQVGGTF 573
Query: 605 AEIY 608
+Y
Sbjct: 574 GRLY 577
>gi|291414417|ref|XP_002723449.1| PREDICTED: DNA-directed DNA polymerase alpha 2 [Oryctolagus
cuniculus]
Length = 600
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 231/429 (53%), Gaps = 47/429 (10%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP + M+ + D L +I + + L E T V +Q
Sbjct: 194 SLKVLGY-PEPLTGSYKSMFQKLPDVREVLTCKIEELGSELREHYKIEAFTPLLVPAQEP 252
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN+KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG+N +
Sbjct: 253 VTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVVMEGTNIT 312
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A+KL + +PLP P+ + D + T+V ++A GP+TT+D
Sbjct: 313 GRKLVATKLYEGVPLPF-----YEPTEE---DGDCEQTMV---------LVACGPYTTSD 355
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ +EPL +LI+ +P + ILLGPF+D++H Q++ S F+++F + LR + +
Sbjct: 356 SITYEPLLDLITVINHDRPDVCILLGPFLDAKHEQVENCLLTSPFEDVFK-QCLRTIIEG 414
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----ITSLTNPGTFEANQIK 484
GS + + VPS+RD +H+ V PQPPF P++ + + ++ P + + +
Sbjct: 415 TRSSGSHL--VFVPSLRDVHHEPVYPQPPFSY--PELAQEDRKRVRFVSEPCSLSISGVI 470
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
G + D+L + EE+S S GTS+ I ++ FYPLYPP EG +D+
Sbjct: 471 FGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILKHILTQRS----FYPLYPPQEGTAIDY 524
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTF 604
+ PD+ I+PS+++YF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 525 ENFYAYAQLPVTPDVFIVPSELRYFVKDI-LG----------CVCVNPGRLTKGQVGGTF 573
Query: 605 AEIYYHGSP 613
+Y P
Sbjct: 574 GRLYLRRPP 582
>gi|311247333|ref|XP_003122587.1| PREDICTED: DNA polymerase alpha subunit B [Sus scrofa]
Length = 597
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 225/427 (52%), Gaps = 43/427 (10%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP + M+ + D L +I + + L E T V +Q
Sbjct: 192 SLKVLGC-PEPLTGSYKSMFQKLSDIREVLTCKIEELGSELKEHYKIEAFTPVLVPAQEP 250
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 251 VTLLGQIGCDSNGKLNHKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVVMEGINTT 310
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A++L + +PLP H ++ D E+I +++A GP+TT+D
Sbjct: 311 GRKLVATRLYEGVPLP------FHQPSEEDGDS-----------EQIMVLVACGPYTTSD 353
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ FEPL +LI+ R +P + IL GPF+D++H Q++ S F+++F + LR + +
Sbjct: 354 SIAFEPLLDLITVINRDRPDVCILFGPFLDAKHEQVESCLLTSPFEDVFK-QCLRTIIEG 412
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVG 486
GS + + VPS+RD + + V PQPPF P + ++ + P T N + G
Sbjct: 413 TRSSGSHL--VFVPSLRDVHREPVYPQPPFSCSDLPREDKKRVQFVPEPCTLSVNGMIFG 470
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSL 546
+ D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 LTSTDLLFHMGAEEIS--SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDVAIDYEH 524
Query: 547 AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
+ PD+ + PS+++YF+K + LG C+CVNPGRL KG+ GTF
Sbjct: 525 FYAHAQLPVTPDVFVAPSELRYFVKDI-LG----------CICVNPGRLTKGQVGGTFGR 573
Query: 607 IYYHGSP 613
+Y P
Sbjct: 574 LYLRRQP 580
>gi|410974408|ref|XP_003993639.1| PREDICTED: DNA polymerase alpha subunit B [Felis catus]
Length = 599
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 219/403 (54%), Gaps = 39/403 (9%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T V +Q + +G I CD +G LN K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYQIEAFTSVLVPAQEPVTLLGQIGCDTNGKLNSK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G LIA+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVILEGINTTGAKLIATKLYEGVPLPF- 327
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
P + D++ +V ++A GP+TT+D++ ++PL +LI+ R +
Sbjct: 328 ----YQPPKE---DEDFEQNMV---------LVACGPYTTSDSITYDPLLDLIAIINRDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + ILLGPF+D++H Q++ S F+++F + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILLGPFLDAKHEQVENCLLTSPFEDVFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC 504
+H+ V PQPPF P + I ++ ++ P + N + G + D+L + EE+S
Sbjct: 429 VHHESVYPQPPFSYSDLPREDIKRVRFVSEPCSLSVNGVVFGLTSTDLLFHMGAEEIS-- 486
Query: 505 SKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS 564
S GTS+ I ++ +YPLYPP E + +D+ + PD+ I+PS
Sbjct: 487 SSSGTSDRLSRILKHILTQRS----YYPLYPPQEDMAIDYENFYTYAQLPVTPDVFIIPS 542
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++KYF+K + LG CVCVNPGRL KG+ GTF +
Sbjct: 543 ELKYFVKDV-LG----------CVCVNPGRLTKGQVGGTFGRL 574
>gi|148222523|ref|NP_001086972.1| polymerase (DNA directed), alpha 2, accessory subunit [Xenopus
laevis]
gi|50414931|gb|AAH77841.1| MGC80532 protein [Xenopus laevis]
Length = 598
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 177/619 (28%), Positives = 299/619 (48%), Gaps = 64/619 (10%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
+ I E + NF DE EV +K + C + LK D+V+ W + R L + +
Sbjct: 6 KSIAEELKVFDVNFEDE-EVPEKMVELCTVHRLKEEDMVNEWMAFSTTRNLPLTVGNLNL 64
Query: 63 MDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDA 122
++ +L+ ++ + +K+E ++D + I + AE+ L L Y+
Sbjct: 65 LEHEVLNKKSARPRPSLKKEKHC---GNRDFNTIQELIEVETAEENL------LDSYATP 115
Query: 123 LDSTYKANANGYSSDKP-SKLVTPFGRRTEKLV--VKFNINNLPNTENGCIEHDDENTE- 178
+ K N + + + P SK + R L F+ + P+ + G + E
Sbjct: 116 AKGSQKRNLS--TPEHPQSKRILSINRSPHVLFSPTSFSPSATPSQKYGSRTNRGEVVTT 173
Query: 179 ----DDIIKRIKTGKKCSLMVHGSGPEPGCR---FMYDRTEDRFNALENRIRKHANALVS 231
+G ++ + S EP + FM+ + D + +I + +L
Sbjct: 174 YGELQGTTWNGGSGSNTNVELFTSLDEPLTKMYKFMFQKLMDIREVVSIKIEELGASLKD 233
Query: 232 SGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE 291
+E T ++ +Q T+ +G I CD +G LN KSV+L+ EHS G +V +DL +L +
Sbjct: 234 HFQIDEFTSVSLPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVPVDLSELKD 293
Query: 292 FSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISR 351
+SLFPGQVV +EG+N +G + +KL + +PLP PS +E
Sbjct: 294 YSLFPGQVVIMEGTNSTGRRFVPTKLYEGVPLPFH-----QPS------KEFEEC----- 337
Query: 352 PEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS 411
P+++ +I A GPFTT+D + ++ LK+LI R +P + ILLGPF+D++H QI+
Sbjct: 338 PQQM-VITACGPFTTSDTITYDALKDLIDIVNRDRPDICILLGPFLDAKHEQIENLQLTV 396
Query: 412 SFDEIFHLEILRRLQDYVE-YMGSEVRAILVPSIRDANHDFVLPQPPFDIQPP--DIIHQ 468
+F+++F R L+ +E S ++VPS+RD +HD V PQPPF P + +
Sbjct: 397 TFEDVFK----RCLKMIIEGTRPSGCHLVIVPSLRDVHHDPVYPQPPFSCFEPAKEDKER 452
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAF 528
+ + +P T N + +G + D+L + EE+ S + DR +S + +
Sbjct: 453 VHFVADPCTLSVNGVVIGMTSTDLLFHMGAEEI---SSSAGAPDR---FSRILRHILTQR 506
Query: 529 FFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCV 588
+YPLYPP E I +D+ + PD+ I+PS+++YFIK ++ C+
Sbjct: 507 SYYPLYPPNEEINIDYEALYSYTPMPVTPDVFIVPSELRYFIKDVT-----------GCI 555
Query: 589 CVNPGRLAKGEGSGTFAEI 607
C+NPGRL KG GT+A
Sbjct: 556 CINPGRLTKGLVGGTYARF 574
>gi|355751972|gb|EHH56092.1| DNA polymerase alpha 70 kDa subunit [Macaca fascicularis]
Length = 598
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/405 (33%), Positives = 220/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQV+ +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQISVDLSELKEYSLFPGQVLIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDGDFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYEMFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|355566320|gb|EHH22699.1| DNA polymerase alpha 70 kDa subunit [Macaca mulatta]
Length = 598
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQISVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDGDFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYETFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|431910281|gb|ELK13354.1| DNA polymerase alpha subunit B [Pteropus alecto]
Length = 639
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 206/368 (55%), Gaps = 39/368 (10%)
Query: 243 VASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGI 302
V +Q + +G I CD +G LN+KSV+L+ EHS G +V +DL +L E+SLFPGQVV +
Sbjct: 285 VPAQEPVTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQVPVDLSELREYSLFPGQVVIM 344
Query: 303 EGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAG 362
EG N +G L+A+KL + +PLP + +Q + +++A G
Sbjct: 345 EGMNTTGRKLVATKLYEGVPLPFYQPTEEEGDFEQNM-----------------VLVACG 387
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEIL 422
P+TT+D++ ++PL +LI+ QP + IL GPF+D++H Q++ SSF+++F + L
Sbjct: 388 PYTTSDSITYDPLLDLITIINHDQPDICILFGPFLDAKHEQVENCLLTSSFEDVFK-QCL 446
Query: 423 RRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEA 480
R + + GS + + VPS+RD H+ V PQPPF P + ++ +++P +
Sbjct: 447 RTIVEGTRSSGSHL--VFVPSLRDVQHEPVYPQPPFSYSDLPHEDRKRVQFVSDPCSLSV 504
Query: 481 NQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGI 540
N + +G + D+L + EE+S S GTS+ I ++ +YPLYPP E +
Sbjct: 505 NGVVLGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDM 558
Query: 541 PLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG 600
+D+ + PD+ I+PS+++YF+K + LG CVCVNPGRL KG+
Sbjct: 559 AIDYESFCAYAQLPVTPDVFIVPSELRYFVKDV-LG----------CVCVNPGRLTKGQV 607
Query: 601 SGTFAEIY 608
GT+ +Y
Sbjct: 608 GGTYGRLY 615
>gi|296218739|ref|XP_002755571.1| PREDICTED: DNA polymerase alpha subunit B [Callithrix jacchus]
Length = 598
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 221/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTYKIEELGSELKEHYKIEVFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPF- 327
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
P+ + D + T+V ++A GP+TT+D++ ++PL +LI+ +
Sbjct: 328 ----YQPTEE---DGDFEQTMV---------LVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F+++F + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDVFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVHFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I+ ++ +YPLYPP E + +D+ + PDI I+P
Sbjct: 487 -SSSGTSDRFSRIFKHILTQRS----YYPLYPPQEDMAIDYETFYVYAQLPVTPDIFIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|351701969|gb|EHB04888.1| DNA polymerase alpha subunit B [Heterocephalus glaber]
Length = 598
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 224/430 (52%), Gaps = 45/430 (10%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP + M+ + D L +I + + L E T V +Q
Sbjct: 192 SLKVVGY-PEPLTGSYKSMFQKLPDIREVLTWKIEELGSKLKEHYKIEAFTPLLVPAQEP 250
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 251 VTLLGQIGCDSNGKLNSKSVILEGDREHSSGAQIPVDLTELKEYSLFPGQVVIMEGINTT 310
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A+KL + +PLP + +Q + +++ GP+TT+D
Sbjct: 311 GRKLVATKLYEGVPLPFYQPTEEDGGFEQTM-----------------VLVTCGPYTTSD 353
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ ++PL +LIS P + IL GPF+D+ H Q++ S F+++F + LR + +
Sbjct: 354 SITYDPLLDLISIINHDHPDVCILFGPFLDANHEQVENCLLTSPFEDVFK-QCLRTIIEG 412
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKV 485
GS + + VPS+RD +H+ V PQPPF D+ D ++ ++ P T N +
Sbjct: 413 TRSSGSHL--VFVPSLRDVHHEPVYPQPPFSYSDLSRED-KKRVQLVSEPCTLSINGVIF 469
Query: 486 GCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS 545
G + D+L + EE+ CS GTS+ I ++ +YPLYPP E + +D+
Sbjct: 470 GLTSTDLLFHMGAEEI--CSSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYE 523
Query: 546 LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA 605
+ PD+ I+PS++KYF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 524 NFYAYAQLPVTPDVFIVPSELKYFVKDI-LG----------CVCVNPGRLTKGQVGGTFG 572
Query: 606 EIYYHGSPEM 615
+Y + E+
Sbjct: 573 RLYLRRTSEV 582
>gi|20127448|ref|NP_002680.2| DNA polymerase alpha subunit B [Homo sapiens]
gi|90110415|sp|Q14181.2|DPOA2_HUMAN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|12654999|gb|AAH01347.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|12804263|gb|AAH02990.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|48145591|emb|CAG33018.1| POLA2 [Homo sapiens]
gi|119594779|gb|EAW74373.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|123982416|gb|ABM82949.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
gi|123997079|gb|ABM86141.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
Length = 598
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|208967074|dbj|BAG73551.1| polymerase (DNA directed) alpha 2 [synthetic construct]
Length = 598
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|410251086|gb|JAA13510.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|397516918|ref|XP_003828668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B [Pan
paniscus]
Length = 598
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|114638540|ref|XP_001169495.1| PREDICTED: DNA polymerase alpha subunit B isoform 4 [Pan
troglodytes]
gi|410212336|gb|JAA03387.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410294866|gb|JAA26033.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410337017|gb|JAA37455.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|388452542|ref|NP_001253937.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|383417163|gb|AFH31795.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|387541568|gb|AFJ71411.1| DNA polymerase alpha subunit B [Macaca mulatta]
Length = 598
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDGDFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYETFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|402892875|ref|XP_003909632.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B
[Papio anubis]
Length = 598
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDGDFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYETFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|426369123|ref|XP_004051546.1| PREDICTED: DNA polymerase alpha subunit B [Gorilla gorilla gorilla]
Length = 598
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 218/405 (53%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSIMYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD+ I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVFIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|439601|gb|AAA16459.1| DNA polymerase alpha [Homo sapiens]
Length = 598
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 219/405 (54%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 328
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 329 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF++S+H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 372 PDVCILFGPFLESKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 428
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 429 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 487 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 541
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 542 SELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 575
>gi|31982107|ref|NP_032919.2| DNA polymerase alpha subunit B isoform 1 [Mus musculus]
gi|341940457|sp|P33611.2|DPOA2_MOUSE RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|18204750|gb|AAH21424.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|40352968|gb|AAH64795.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|74211927|dbj|BAE29306.1| unnamed protein product [Mus musculus]
gi|148701243|gb|EDL33190.1| polymerase (DNA directed), alpha 2, isoform CRA_c [Mus musculus]
Length = 600
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 224/424 (52%), Gaps = 42/424 (9%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 199 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LI+ R QP + IL GPF+D++H Q++ S F+++F + LR + + GS +
Sbjct: 362 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF + ++ ++ P + N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELSREDKKRVQFVSEPCSLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ S GTS DR +S + + +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--FSSSGTS-DR---FSRVLKHILTQRSYYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVCVNPGRL KG+ GTF +Y P+
Sbjct: 533 VTPDVFIVPSELRYFVKDIF-----------GCVCVNPGRLTKGQVGGTFGRLYLRRQPK 581
Query: 615 MMNA 618
M+
Sbjct: 582 AMDG 585
>gi|308809287|ref|XP_003081953.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
gi|116060420|emb|CAL55756.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
Length = 650
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 215/433 (49%), Gaps = 65/433 (15%)
Query: 205 RFMYDRTEDRFNALENRIR--------------------KHANALVSSGLYEEPTDPTVA 244
R+M DR DR ++ R+R + A+ SS + P
Sbjct: 224 RYMRDRISDRVRMIDARVREVETRFAVAVEADDDAAVATQDDAAVASSSAFVSPVGSKTG 283
Query: 245 SQRTLFAVGMIC---CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVG 301
+ F VG I DG L DK+V L+ S++ S G RVRL+L L +SLFPGQVV
Sbjct: 284 DEDGHF-VGRIVSAHVGSDGKLTDKTVALEGSIDGSSGARVRLELRDLESYSLFPGQVVK 342
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA 361
+ G NP+GHC++A +D V V P + D + V R E+ I+A+
Sbjct: 343 VRGRNPAGHCIVAKY--------IDTDVSVKPFARSKTD-----SPVFKRGAEV--IVAS 387
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEI-FHLE 420
GPF+ + NL +EPL +L+ Y + ++P L+L GP +D+E+ +K G F +
Sbjct: 388 GPFSCSSNLRYEPLHDLLEYVREEKPDALVLCGPLLDAENALVKSGDLGEKFTYYDVAAK 447
Query: 421 ILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDII---HQITSLTNPGT 477
++ +L+D + G++V I VPS RD D V PQP + + + ++ S++NPGT
Sbjct: 448 VVAKLEDELRERGTKV--IFVPSARDVTLDPVFPQPAASVD--EFVTDRSRVVSVSNPGT 503
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
FE N + C VDVLK LS E+S+ +R+ + + A YPLYPP
Sbjct: 504 FEINGVVFSACGVDVLKHLSAREISQGH---APKERLGRLAGHVVRQAHA---YPLYPPD 557
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
LD + +AL PD++ILPSD+K F +V + VCVNPGRLA+
Sbjct: 558 VSTCLD-ARHGDALAFERAPDVLILPSDLKAFAEVC-----------EDVVCVNPGRLAR 605
Query: 598 GEGSGTFAEIYYH 610
G GT A+I H
Sbjct: 606 GNVGGTLAKIVVH 618
>gi|303659|dbj|BAA02746.1| DNA polymerase alpha associated subunit [Mus musculus]
Length = 600
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 224/424 (52%), Gaps = 42/424 (9%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 199 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVARGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LI+ R QP + IL GPF+D++H Q++ S F+++F + LR + + GS +
Sbjct: 362 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF + ++ ++ P + N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELSREDKKRVQFVSEPCSLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ S GTS DR +S + + +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--FSSSGTS-DR---FSRVLKHILTQRSYYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVCVNPGRL KG+ GTF +Y P+
Sbjct: 533 VTPDVFIVPSELRYFVKDIF-----------GCVCVNPGRLTKGQVGGTFGRLYLRRQPK 581
Query: 615 MMNA 618
M+
Sbjct: 582 AMDG 585
>gi|299117538|emb|CBN75382.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 696
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 228/481 (47%), Gaps = 77/481 (16%)
Query: 186 KTGKKCSLMVHGSGPEPG-CRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA 244
+ G +C ++V G+ P R+MY E+R ALE + + E T V
Sbjct: 208 QAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGLTEITPVGVP 267
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
Q + AVG +CC+ +G +N S+LL+ S S GQR LDL +L F+LFPGQVV ++
Sbjct: 268 RQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQ 327
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG ++A ++D +P P+ PS + + + + +S+ AAGP
Sbjct: 328 GVNGSGGRMVARGIIDGVPRPL-------PSSRPSDLLRAQHGAELGGGKALSIFAAAGP 380
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKK----------GTTDSSF 413
FTT+D+L +EPL +L+ + +P +++L+GPFVDSEHP++ G+ F
Sbjct: 381 FTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDF 440
Query: 414 DEIFHLEILRRLQD-YVEYMGSEVRAILVPSIRDANHDFVLPQPPF------------DI 460
+ +F L + +L + + + +LVPS+RD H+FV PQPPF
Sbjct: 441 ETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGA 500
Query: 461 QPPDII-------------------------HQITSLTNPGTFEANQIKVGCCTVDVLKQ 495
P + + ++ NP N++ +G + D L
Sbjct: 501 YPEERMFVLDVPKTGARTTSGGASAAAAARQKRVHLAPNPAWLRVNEVTIGVSSTDALFD 560
Query: 496 LSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEG--IPLDFSLAQEALTI 553
LSG+E+S K R+ + L FYPL+PP G LD A +
Sbjct: 561 LSGDEVSAGGKGTNRLARLAGHLLQQQ------SFYPLFPPPAGSAAQLDMRHAHR-WGM 613
Query: 554 STIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSP 613
PD++++PS + F + + + C+CVNPG+L+KG G GT+AE+ H P
Sbjct: 614 PATPDVLLVPSRLAQFAR-----------QVQGCLCVNPGQLSKGTGGGTYAELAVHPMP 662
Query: 614 E 614
+
Sbjct: 663 Q 663
>gi|301762582|ref|XP_002916691.1| PREDICTED: DNA polymerase alpha subunit B-like [Ailuropoda
melanoleuca]
Length = 595
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 225/422 (53%), Gaps = 43/422 (10%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G GPE + M+ + D + L +I + + L E T + +Q
Sbjct: 188 SLKVLG-GPESLTGSYKSMFQKLPDIRDVLTCKIEELGSELKEHYKIEAFTPVLLPAQEP 246
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 247 ITLLGQIGCDTNGKLNSKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVVMEGMNTT 306
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G IA+KL + +PLP P+ + D + +V ++A GP+TT+D
Sbjct: 307 GRKFIATKLYEGVPLPF-----YQPTKE---DGDFEQNMV---------LVACGPYTTSD 349
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ ++PL +LI+ R QP + IL GPF+D++H Q++ S F++IF + LR + +
Sbjct: 350 SITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEG 408
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVG 486
GS + + VPS+RD + + V PQPPF D ++ ++ P + N + G
Sbjct: 409 TRSSGSHL--VFVPSVRDVHREPVYPQPPFSYSDLSRDDRKRVQFVSEPCSLSINGVIFG 466
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSL 546
+ D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 467 LTSTDLLFHMGAEEIS--SASGTSDRLSRILKHILTQRS----YYPLYPPQEDMAIDYES 520
Query: 547 AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
+S PD+ I+PS++KYF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 521 FYTYAQLSVTPDVFIIPSELKYFVKDV-LG----------CVCVNPGRLTKGQVGGTFGR 569
Query: 607 IY 608
++
Sbjct: 570 LF 571
>gi|281350633|gb|EFB26217.1| hypothetical protein PANDA_004805 [Ailuropoda melanoleuca]
Length = 569
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 225/422 (53%), Gaps = 43/422 (10%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G GPE + M+ + D + L +I + + L E T + +Q
Sbjct: 162 SLKVLG-GPESLTGSYKSMFQKLPDIRDVLTCKIEELGSELKEHYKIEAFTPVLLPAQEP 220
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 221 ITLLGQIGCDTNGKLNSKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVVMEGMNTT 280
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G IA+KL + +PLP P+ + D + +V ++A GP+TT+D
Sbjct: 281 GRKFIATKLYEGVPLPF-----YQPTKE---DGDFEQNMV---------LVACGPYTTSD 323
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ ++PL +LI+ R QP + IL GPF+D++H Q++ S F++IF + LR + +
Sbjct: 324 SITYDPLLDLIAIINRDQPDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEG 382
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVG 486
GS + + VPS+RD + + V PQPPF D ++ ++ P + N + G
Sbjct: 383 TRSSGSHL--VFVPSVRDVHREPVYPQPPFSYSDLSRDDRKRVQFVSEPCSLSINGVIFG 440
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSL 546
+ D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 441 LTSTDLLFHMGAEEIS--SASGTSDRLSRILKHILTQRS----YYPLYPPQEDMAIDYES 494
Query: 547 AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
+S PD+ I+PS++KYF+K + LG CVCVNPGRL KG+ GTF
Sbjct: 495 FYTYAQLSVTPDVFIIPSELKYFVKDV-LG----------CVCVNPGRLTKGQVGGTFGR 543
Query: 607 IY 608
++
Sbjct: 544 LF 545
>gi|149062123|gb|EDM12546.1| polymerase (DNA directed), alpha 2, isoform CRA_a [Rattus
norvegicus]
Length = 600
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 217/420 (51%), Gaps = 42/420 (10%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + D L +I + + L E T V +Q + +G I
Sbjct: 199 PEPLTSSYKTMFQQLPDIREVLTCKIEELGSELKEHYKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +D+ +L ++SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGRLNSKSVILEGDREHSSGAQIPVDMSELKDYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP + +Q + +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLPFYQPTEEEGDFEQTM-----------------VLVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LIS +P + IL GPF+D++H Q++ S F++IF + LR + + GS +
Sbjct: 362 DLISTINHDRPDVCILFGPFLDAKHEQVENCKLTSPFEDIFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF P + ++ ++ P N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELPREDKKRVQFVSEPCNLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ CS GTS+ I ++ +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--CSSSGTSDRFSRILKHILTQRS----YYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVC+NPGRL KG+ GTF +Y P+
Sbjct: 533 VTPDVFIVPSELRYFVKDIF-----------GCVCMNPGRLTKGQVGGTFGRLYLRRQPK 581
>gi|52788200|sp|O89043.2|DPOA2_RAT RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit; AltName: Full=DNA
polymerase subunit II
gi|5912572|emb|CAB56208.1| DNA polymerase alpha [Rattus norvegicus]
Length = 600
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 217/420 (51%), Gaps = 42/420 (10%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + D L +I + + L E T V +Q + +G I
Sbjct: 199 PEPLTSSYKTMFQQLPDIREVLTCKIEELGSELKEHYKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +D+ +L ++SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGRLNSKSVILEGDREHSSGAQIPVDVSELKDYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP + +Q + +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLPFYQPTEEEGDFEQTM-----------------VLVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LIS +P + IL GPF+D++H Q++ S F++IF + LR + + GS +
Sbjct: 362 DLISTINHDRPDVCILFGPFLDAKHEQVENCKLTSPFEDIFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF P + ++ ++ P N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELPREDKKRVQFVSEPCNLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ CS GTS+ I ++ +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--CSSSGTSDRFSRILKHILTQRS----YYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVC+NPGRL KG+ GTF +Y P+
Sbjct: 533 VTPDVFIVPSELRYFVKDIF-----------GCVCMNPGRLTKGQVGGTFGRLYLRRQPK 581
>gi|3676244|emb|CAA09721.1| DNA polymerase alpha subunit II [Rattus norvegicus]
Length = 495
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 218/420 (51%), Gaps = 42/420 (10%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + D L +I + + L E T V +Q + +G I
Sbjct: 94 PEPLTSSYKTMFQQLPDIREVLTCKIEELGSELKEHYKIEAFTPLLVPAQEPVILLGQIG 153
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +D+ +L ++SLFPGQVV +EG N +G L A+K
Sbjct: 154 CDSNGKLNSKSVILEGDREHSSGAQIPVDVSELKDYSLFPGQVVIMEGFNTTGRRLTATK 213
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP + +Q + +++A GP+TT+D++ ++PL
Sbjct: 214 LYEGVPLPFYQPTEEEGDFEQTM-----------------VLVACGPYTTSDSITYDPLL 256
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LIS +P + IL GPF+D++H Q++ S F++IF + LR + + GS +
Sbjct: 257 DLISTINHDRPDVCILFGPFLDAKHEQVENCKLTSPFEDIFK-QCLRTVIEGTRSSGSHL 315
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF P + ++ ++ P + N + G + D+L
Sbjct: 316 --VFVPSLRDVHHEPVYPQPPFTFSELPREDKKRVQFVSEPCSLSINGVMFGLTSTDLLF 373
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ CS GTS+ I ++ +YPLYPP E + +D+ +
Sbjct: 374 HIGAEEI--CSSSGTSDRFSRILKHILTQRS----YYPLYPPHEDMAIDYENFYTYAQLP 427
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVC+NPGRL KG+ GTF +Y P+
Sbjct: 428 VTPDVFIVPSELRYFVKDIF-----------GCVCMNPGRLTKGQVGGTFGRLYLRRQPK 476
>gi|354505058|ref|XP_003514589.1| PREDICTED: DNA polymerase alpha subunit B-like [Cricetulus griseus]
gi|344258643|gb|EGW14747.1| DNA polymerase alpha subunit B [Cricetulus griseus]
Length = 600
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 221/424 (52%), Gaps = 42/424 (9%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + D L +I + + L E T +Q + +G I
Sbjct: 199 PEPLTSSYKTMFQQLSDVREVLTCKIEELGSELKEHYKIEAFTPLLEPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL L E+SLFPGQVV +EG N +G A+K
Sbjct: 259 CDSNGKLNSKSVILEGDREHSSGTQIPVDLSDLKEYSLFPGQVVIMEGFNTTGRRFTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP P+ + D + T+V ++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLPF-----YQPTEE---DADFEQTMV---------LVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LI+ +P + IL GPF+D++H Q++ S F+++F + LR + + GS +
Sbjct: 362 DLITIINHDRPDVCILFGPFLDAKHEQVENCQLTSPFEDVFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD H+ V PQPPF P + ++ ++ P + N + G + D+L
Sbjct: 421 --VFVPSLRDVQHEPVYPQPPFTFSELPREDKKRVQFVSEPCSLSINGVIFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ CS GT + I ++ +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--CSSSGTPDRFSRILKHILTQRS----YYPLYPPHEDMSIDYENFYTYAQMP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + LG CVC+NPGRL KG+ GT+ +Y+ P
Sbjct: 533 VTPDVFIVPSELRYFVKDI-LG----------CVCMNPGRLTKGQVGGTYGRLYFRRQPR 581
Query: 615 MMNA 618
M++
Sbjct: 582 AMDS 585
>gi|326436074|gb|EGD81644.1| hypothetical protein PTSG_02360 [Salpingoeca sp. ATCC 50818]
Length = 651
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 175/663 (26%), Positives = 291/663 (43%), Gaps = 92/663 (13%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
ME IK +F + G +D+ V+ +C C + L+P DL W +++++QL + +
Sbjct: 1 METAIKEQFGELGIT-LDDDAVIGQCADLCHRFGLEPLDLAVKWNAFFMSKQLGDKPTQS 59
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILN----------DEDENIAEDILG 110
++ + + + + P++H S + N D E I
Sbjct: 60 -ALEQLAQDMSKTMSQKVTPQRPTVHYDKSTIGSGLANALVSSFGLSGDVAEAIKTSAQK 118
Query: 111 TPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVV---KFNINNLPNTEN 167
+ K S A K + G S P+ TP ++ L + + N T
Sbjct: 119 PKQSSRKRMSFASPQAVKRSVGGARS-TPNTPGTPTSQQASSLPAESPRASANYATRTNA 177
Query: 168 GCIEHDDENTEDDI-IKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRI---- 222
G +E + + + + + V S E RFM+++ DR L+ RI
Sbjct: 178 GHVELTFNPGQRPVEVASDGPRQNVHVSVFPSTLEKTYRFMFEKLHDRAEVLDVRIEDMA 237
Query: 223 ----RKH-------------------ANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG 259
RKH L + E+ SQ + VG +C D
Sbjct: 238 ELIIRKHKLQSIALKKSEEDEGGDEEQQELTPRQVLEQLNSVDFPSQSPVLVVGRVCVDA 297
Query: 260 -DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
+G LN +SV+L+ + +S G+RV LDL FSLFPGQ++ EG NP+G S +
Sbjct: 298 AEGRLNSRSVVLEGCLANSLGKRVPLDLSSTQLFSLFPGQIIAAEGVNPTGDAFTPSLIY 357
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE---ISMIIAAGPFTTTDNLYFEPL 375
P P K+ QE + + +++++AAGPFTT +L + PL
Sbjct: 358 QGAPAP----------RKKTKPQEFLDLYFSNDGPDGGAVNVMMAAGPFTTNQDLTYAPL 407
Query: 376 KELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSE 435
+ ++ + +P+++I++GPFV +HP I D SFDE+ ++ ++ V +
Sbjct: 408 DDFLAKVSQTRPEVVIVIGPFVHDQHPLITGCEFDESFDEVLTF-VMEKITGVVSSL-PH 465
Query: 436 VRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITS---LTNPGTFEANQIKVGCCTVDV 492
AI++PS+ D HDF+ PQ PF I P + H + L NP TF N++ + DV
Sbjct: 466 THAIVIPSLGDVTHDFIFPQAPFQI--PTLRHDVRRVHFLANPSTFMINELTFAVTSNDV 523
Query: 493 LKQLSGEEMSRCSKDGTSN----DRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQ 548
L QL S+ GT++ DRM+ ++ + FYPL PP E + LD++
Sbjct: 524 LFQL--------SRSGTASNMHTDRMQRL---VNHLFEQRSFYPLDPPHEQVHLDYAHI- 571
Query: 549 EALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
+ L + PD+IILPS +++F++ + + +NPG L + GT+A +
Sbjct: 572 DNLKLPVTPDVIILPSTLRHFVR-----------DVNGSLAINPGHLTRMSAGGTYAHLL 620
Query: 609 YHG 611
HG
Sbjct: 621 IHG 623
>gi|395852330|ref|XP_003798692.1| PREDICTED: DNA polymerase alpha subunit B [Otolemur garnettii]
Length = 598
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 222/408 (54%), Gaps = 43/408 (10%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
+ M+ + D L +I + + L E T + +Q + +G I CD +G LN
Sbjct: 207 KTMFQKLADIREVLTCKIEELGSELKEHYEIEAFTPLSELAQEPVALLGQIGCDSNGKLN 266
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+KS++L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G LIA+KL + +PLP
Sbjct: 267 NKSMILEGDREHSSGVQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLIATKLYEGVPLP 326
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA-GPFTTTDNLYFEPLKELISYAK 383
+ +Q SM++AA GP+TT D++ ++PL +LI+
Sbjct: 327 FYQPTEEDGDFEQ------------------SMVLAACGPYTTCDSITYDPLLDLIAIIN 368
Query: 384 RKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPS 443
+P + IL GPF+D++H Q++ SSF+++F + LR + + GS + + VPS
Sbjct: 369 HDRPDVCILFGPFLDAKHEQVENCLLTSSFEDVFK-QCLRTIIEGTRSSGSHL--VFVPS 425
Query: 444 IRDANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE 500
+RD +H+ V PQPPF D+ D ++ ++ P T N + G + D+L + EE
Sbjct: 426 LRDVHHEPVYPQPPFSYSDLSRED-KKRVQFVSEPCTLSINGVIFGLTSTDLLFHMGAEE 484
Query: 501 MSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDII 560
+S S GTS DR +S + + +YPLYPP E + +D+ + PD+
Sbjct: 485 IS--SSSGTS-DR---FSRILKHILTQRSYYPLYPPQEDMAIDYENFYVYAQLPVTPDVF 538
Query: 561 ILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
I+PS++KYF+K + LG CVCVNPGRL KG+ GTF+ +Y
Sbjct: 539 IIPSELKYFVKDI-LG----------CVCVNPGRLTKGQVGGTFSRLY 575
>gi|74228759|dbj|BAE21869.1| unnamed protein product [Mus musculus]
Length = 600
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 223/424 (52%), Gaps = 42/424 (9%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 199 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFP QVV +EG N +G L A+K
Sbjct: 259 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPEQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LI+ R QP + IL GPF+D++H Q++ S F+++F + LR + + GS +
Sbjct: 362 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF + ++ ++ P + N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELSREDKKRVQFVSEPCSLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ S GTS DR +S + + +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--FSSSGTS-DR---FSRVLKHILTQRSYYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVCVNPGRL KG+ GTF +Y P+
Sbjct: 533 VTPDVFIVPSELRYFVKDIF-----------GCVCVNPGRLTKGQVGGTFGRLYLRRQPK 581
Query: 615 MMNA 618
M+
Sbjct: 582 AMDG 585
>gi|52346026|ref|NP_001005060.1| DNA-directed DNA polymerase alpha 2 [Xenopus (Silurana) tropicalis]
gi|49903509|gb|AAH76954.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 177/629 (28%), Positives = 292/629 (46%), Gaps = 85/629 (13%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
+ I+ E NF D+ EV +K + C + L+ D+V+ W + R L + +
Sbjct: 6 KSIEEELTVFDVNFEDD-EVPEKMVELCTVHRLQEEDMVNEWMAFSTTRNLPLTVSNLNI 64
Query: 63 MDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDED---------ENIAEDILGTPP 113
++ +L+ ++ + K+E ++D + I + ++ A G+
Sbjct: 65 LEHEVLNKKSARPRPSQKKEKHC---GNRDFNTIQELIEVETEEENLLDSYATPAKGSQK 121
Query: 114 DNLKLYSDALDSTYKANANGYSSDKPSKL---VTP---FGRRTEKLVVKFNINNLPNTE- 166
NL N + + P+ TP +G RT + V L T
Sbjct: 122 RNLSTPEHPQSKRISVNRSPHVLFSPASFSPSATPSQKYGSRTNRGEVVTTYGELQGTTW 181
Query: 167 NGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCR---FMYDRTEDRFNALENRIR 223
NG +G+ S+ + EP + FM+ + D + ++I
Sbjct: 182 NG-----------------GSGRNTSVELFTCQDEPLTKMYKFMFQKLMDIREVVSSKIE 224
Query: 224 KHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR 283
+ +L + +E T + +Q T+ +G I CD +G LN KSV+L+ EHS G +V
Sbjct: 225 ELGASLKNHFQIDEFTSVSFPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVP 284
Query: 284 LDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEI 343
+DL +L E+SLFPGQVV +EG+N +G + +KL + +PLP PS +E
Sbjct: 285 VDLSELKEYSLFPGQVVIMEGTNSTGRRFVPTKLYEGVPLPFH-----QPS------KEF 333
Query: 344 HSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQ 403
P+++ +I A GPFTT+D + ++ LK+LI R P + ILLGPF+D++H Q
Sbjct: 334 EEC-----PQQM-VITACGPFTTSDTITYDALKDLIDVLNRDCPDICILLGPFLDAKHEQ 387
Query: 404 IKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPP 463
I+ +F+++F L+ + + G + + VPS+RD +HD V PQPPF P
Sbjct: 388 IENLQLTVTFEDVFK-RCLKMIIEGTRLSGCHL--VFVPSLRDVHHDPVYPQPPFSCFEP 444
Query: 464 -----DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
D +H + +P T N + +G + D+L + EE+S S G + I
Sbjct: 445 AKEDKDRVHFV---ADPCTLSVNGVILGITSTDLLFHMGAEEIS--SSVGAPDRFSRILR 499
Query: 519 LDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGR 578
++ +YPLYPP E I +D+ + PDI I+PS+++YFIK ++
Sbjct: 500 HILTQRS----YYPLYPPNEEINVDYEAFYSYAPMPVTPDIFIVPSELRYFIKDVT---- 551
Query: 579 NEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
C+C+NPGRL KG GT+A
Sbjct: 552 -------GCICINPGRLTKGLVGGTYARF 573
>gi|196006784|ref|XP_002113258.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
gi|190583662|gb|EDV23732.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
Length = 595
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/632 (27%), Positives = 289/632 (45%), Gaps = 72/632 (11%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
+ ++ AEF+ G +D+ ++ C Y+L S +V W + + D
Sbjct: 15 LATKLVAEFESFGV-IIDDLGIIDNLRAMCKLYSLDESTMVDEWMAFACSSGND------ 67
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPS--LHIYSSKDVDMILNDEDENIAEDILGTP--PDNL 116
+ + + E+ KE + L I +S+ D +E+ D TP +
Sbjct: 68 -------IEITHSALESFEKELSAYRLSILASR------LDREEHSLIDAYCTPEMKASK 114
Query: 117 KLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDEN 176
+L + K Y S++ +P + N + T N C
Sbjct: 115 RLLKTPESDSRKLIKTPYKRTPASQIFSPNSYSPNMYSSRGNAGEILATLNMC------G 168
Query: 177 TEDDIIKRIKTGKKCSLMVHGSGPEP----GCRFMYDRTEDRFNALENRIRKHANALVSS 232
D+ I G K + V + P+ G R+M+ + +R AL +++ A L
Sbjct: 169 INDETINWKGHGIKTN--VTAADPDQCLDEGYRYMFQKISERIEALRHQVSLVAEPLQEQ 226
Query: 233 GLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR-LDLHKLGE 291
+E V SQ +G I CD +G LN S+++ + + L++ +L
Sbjct: 227 HGIQELGYVDVPSQDGTTVIGRIGCDSNGRLNAASLVIAGYNPNRVCRSATPLNVKELSH 286
Query: 292 FSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISR 351
FS FPGQVV ++G NPSG+ IASKL I LP + + E + S
Sbjct: 287 FSFFPGQVVVLDGKNPSGNAFIASKLYQGIALPFNKI-----------PLEKAKSYYPSD 335
Query: 352 PEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS 411
+++++A GPFTT DNL +EPL +L+ +QP + IL GPFVD++ IK+G +
Sbjct: 336 DSPMNILVACGPFTTADNLLYEPLSDLLKVILNQQPDIAILCGPFVDAKQELIKQGEINI 395
Query: 412 SFDEIFHLEILRRLQDYVEYMGS-EVRAILVPSIRDANHDFVLPQPPFDIQPP-DIIHQI 469
S++++F ++RL + +E +G + VPS RD +HDF+ PQPPF + +I
Sbjct: 396 SYEDLF----IKRLSEIIENVGRISTSVVFVPSTRDVHHDFIYPQPPFTLPSSLKTAPEI 451
Query: 470 TSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFF 529
+++P T N + +G + D+L + EE + S G S+ + I
Sbjct: 452 HFVSDPCTLIVNDVTIGLTSTDILFHMGAEETA--SPPGMSDRIGRLLKHLIHQRN---- 505
Query: 530 FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVC 589
+YPLYPP+E + D + PDI+I+PSD++YF+K + +KC C
Sbjct: 506 YYPLYPPSEEVNFDRENFVNFGFMPVTPDILIVPSDLRYFVK-----------DVEKCCC 554
Query: 590 VNPGRLAKGEGSGTFAEIYYHGSPEMMNASII 621
VNPGRLAKG+ G++A I P++ N +I
Sbjct: 555 VNPGRLAKGQVGGSYARIAVL-PPKVANQPVI 585
>gi|73983698|ref|XP_533234.2| PREDICTED: DNA polymerase alpha subunit B [Canis lupus familiaris]
Length = 595
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 216/405 (53%), Gaps = 41/405 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D + L +I + + L E T V +Q + +G I CD +G LN K
Sbjct: 205 MFQKLPDIRDVLTCKIEELGSELKEHYKIEAFTPVLVPAQEPVILLGQIGCDTNGKLNSK 264
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 265 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGLPLPFY 324
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q + +++A GP+TT+D++ ++PL +LI+ R Q
Sbjct: 325 QPTEEDGDFEQNM-----------------VLVACGPYTTSDSITYDPLLDLIAIINRDQ 367
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 368 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSVRD 424
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+ + V PQPPF D+ D ++ ++ P N + G + D+L + EE+S
Sbjct: 425 VHCEPVYPQPPFSYSDLARED-RKRVHFVSEPCNLSINGVIFGLTSTDLLFHMGAEEIS- 482
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PDI I+P
Sbjct: 483 -SASGTSDRLSRILKHILTQRS----YYPLYPPQEDMAIDYENFYIYAQLPITPDIFIIP 537
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
S++KYF+K + LG CVCVNPGRL KG+ GTF ++
Sbjct: 538 SELKYFVKDV-LG----------CVCVNPGRLTKGQVGGTFGRLF 571
>gi|67514566|ref|NP_445932.2| DNA polymerase alpha subunit B [Rattus norvegicus]
gi|66910546|gb|AAH97300.1| Polymerase (DNA directed), alpha 2 [Rattus norvegicus]
Length = 600
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 216/420 (51%), Gaps = 42/420 (10%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + D L +I + + L E T V +Q + +G I
Sbjct: 199 PEPLTSSYKTMFQQLPDIREVLTCKIEELGSELKEHYKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +D+ +L ++SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGRLNSKSVILEGDREHSSGAQIPVDMSELKDYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP + +Q + +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLPFYQPTEEEGDFEQTM-----------------VLVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LIS + + IL GPF+D++H Q++ S F++IF + LR + + GS +
Sbjct: 362 DLISTINHDRLDVCILFGPFLDAKHEQVENCKLTSPFEDIFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF P + ++ ++ P N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELPREDKKRVQFVSEPCNLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ CS GTS+ I ++ +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--CSSSGTSDRFSRILKHILTQRS----YYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
PD+ I+PS+++YF+K + CVC+NPGRL KG+ GTF +Y P+
Sbjct: 533 VTPDVFIVPSELRYFVKDIF-----------GCVCMNPGRLTKGQVGGTFGRLYLRRQPK 581
>gi|89268970|emb|CAJ82570.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 176/629 (27%), Positives = 291/629 (46%), Gaps = 85/629 (13%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
+ I+ E NF D+ EV +K + C + L+ D+V+ W + R L + +
Sbjct: 6 KSIEEELTVFDVNFEDD-EVPEKMVELCTVHRLQEEDMVNEWMAFSTTRNLPLTVSNLNI 64
Query: 63 MDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDED---------ENIAEDILGTPP 113
++ +L+ ++ + K+E ++D + I + ++ A G+
Sbjct: 65 LEHEVLNKKSARPRPSQKKEKHC---GNRDFNTIQELIEVETEEENLLDSYATPAKGSQK 121
Query: 114 DNLKLYSDALDSTYKANANGYSSDKPSKL---VTP---FGRRTEKLVVKFNINNLPNTE- 166
NL N + + P+ TP +G RT + V L T
Sbjct: 122 RNLSTPEHPQSKRISVNRSPHVLFSPASFSPSATPSQKYGSRTNRGEVVTTYGELQGTTW 181
Query: 167 NGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCR---FMYDRTEDRFNALENRIR 223
NG +G+ S+ + EP + FM+ + D + ++I
Sbjct: 182 NG-----------------GSGRNTSVELFTCQDEPLTKMYKFMFQKLMDIREVVSSKIE 224
Query: 224 KHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR 283
+ +L + +E T + +Q T+ +G I CD +G LN KSV+L+ EHS G +V
Sbjct: 225 ELGASLKNHFQIDEFTSVSFPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVP 284
Query: 284 LDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEI 343
+DL +L E+SLFPGQVV +EG+N +G + +KL + +PLP PS +E
Sbjct: 285 VDLSELKEYSLFPGQVVIMEGTNSTGRRFVPTKLYEGVPLPFH-----QPS------KEF 333
Query: 344 HSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQ 403
P+++ +I A GPFTT+D + ++ LK+LI R P + ILLGPF+D++H Q
Sbjct: 334 EEC-----PQQM-VITACGPFTTSDTITYDALKDLIDVLNRDCPDICILLGPFLDAKHEQ 387
Query: 404 IKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPP 463
I+ +F+++F L+ + + G + + VPS+RD +HD V PQPPF P
Sbjct: 388 IENLQLTVTFEDVFK-RCLKMIIEGTRLSGCHL--VFVPSLRDVHHDPVYPQPPFSCFEP 444
Query: 464 -----DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
D +H + +P T N + +G + D+L + EE+S S G + I
Sbjct: 445 AKEDKDRVHFV---ADPCTLSVNGVILGITSTDLLFHMGAEEIS--SSVGAPDRFSRILR 499
Query: 519 LDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGR 578
++ +YPLYPP E I +D+ + PDI I+PS+++YFIK ++
Sbjct: 500 HILTQRS----YYPLYPPNEEINVDYEAFYSYAPMPVTPDIFIVPSELRYFIKDVT---- 551
Query: 579 NEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
C+C+NPGRL KG G +A
Sbjct: 552 -------GCICINPGRLTKGLVGGIYARF 573
>gi|395544820|ref|XP_003774304.1| PREDICTED: DNA polymerase alpha subunit B, partial [Sarcophilus
harrisii]
Length = 634
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 40/404 (9%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L RI + L E + +V +Q + +G I CD +G LN K
Sbjct: 247 MFQKFTDIREVLTCRIEELGYELKELHKIEAFSPISVPAQEPITLLGQIGCDSNGKLNSK 306
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQ+V +EG+N +G IA+KL + PLP
Sbjct: 307 SVILEGDREHSLGVQIPVDLSELKEYSLFPGQIVVMEGTNTTGKKFIATKLYEGAPLPF- 365
Query: 327 AVVDVHPSMKQ-ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
P+ + LDQ + +++A GP+TT+D++ ++P+ +LIS R
Sbjct: 366 ----YQPTEEDGGLDQRM-------------LLVACGPYTTSDSITYDPMMDLISVISRD 408
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIR 445
QP + ILLGPF+D++H Q++ SF+++F LR + + G+ + + VPS+R
Sbjct: 409 QPDVCILLGPFLDAKHEQVENCQLTPSFEDVFK-HCLRTIIEGTRSSGTHL--VFVPSLR 465
Query: 446 DANHDFVLPQPPFD-IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC 504
D NH V PQPPF ++ + ++ +++P N + +G + D+L + EE+S
Sbjct: 466 DVNHRPVYPQPPFSCLELKEDKERVHFVSDPCILSINGVILGLTSTDLLFHMGAEEISSS 525
Query: 505 SKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS 564
S R+ + L FYPLYPP E + +D+ + PD++I PS
Sbjct: 526 SSASDRFSRILKHVLT------QRSFYPLYPPFEEMSIDYEHFYSYAQLPITPDVLIAPS 579
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
D++YF+K + LG CVC+NPGRL KG+ GTF +Y
Sbjct: 580 DLRYFVKDV-LG----------CVCMNPGRLTKGQVGGTFGRLY 612
>gi|320166831|gb|EFW43730.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 649
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 192/668 (28%), Positives = 298/668 (44%), Gaps = 120/668 (17%)
Query: 4 EIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYL----NRQLDE---- 55
EI +EF G D+ ++ +CLT C +++ L + WE + +R+L
Sbjct: 6 EIISEFADIGQKLSDD--LVAQCLTICNRFDVSAETLAAKWEAFASASDSSRRLGADDLA 63
Query: 56 ------------------------------STVKDDEMDGFMLHLQNEQKEAIIKEEPSL 85
+TV ++D + +++ I +E L
Sbjct: 64 SLQKQLQDQERQQQNQRSATKKRPANAPIPTTVSPAKVD--LASTTFDKRTVHIVDESIL 121
Query: 86 HIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDK--PSKLV 143
+Y D M + + GTPP N SD + S + S + PSK
Sbjct: 122 SLYGMSD-QMSSRSSKDTPNKRPFGTPPPNR--VSDTIGSPLLLSPTSLSPTRNLPSKA- 177
Query: 144 TPFGRRTEKLVVKFNINN-LPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEP 202
F R+ V+F +N LP N I + + C L +
Sbjct: 178 --FSERSNAGKVEFILNEALPPWRRPA------NAGPRTID-MGMFESCQLTPY------ 222
Query: 203 GCRFMYDRTEDRFNALENRI-------RKH--ANALVS---SGLYEE--PTDPTVASQRT 248
RFM + D+ L+ +I RK NA S GL ++ P P Q
Sbjct: 223 --RFMLQKVTDKAEVLDQKIEELGALIRKQQLPNAPASFDHVGLAKQSSPFAPFAPQQAM 280
Query: 249 LFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNP 307
G IC D G+G LND S+LL+ S + G R+ LD+ L FS FPGQ+V +G N
Sbjct: 281 ATVAGRICSDAGNGKLNDVSILLEGSRDVCNGVRIPLDMRSLDHFSAFPGQIVVAQGYNI 340
Query: 308 SG--HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFT 365
+G + P P+ Q LD + S +S++ AAGPF+
Sbjct: 341 TGTKFSVQPHSFFTSAPKPMQQT-----ETAQLLD---YWAPYRSGNRPLSIVAAAGPFS 392
Query: 366 TTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRL 425
TD+L F PL EL + +P +LIL+GPFVD +HP + G D +F+++F + +
Sbjct: 393 GTDDLSFAPLMELATQVGNSEPDVLILMGPFVDEQHPGVAAGELDVTFEDLFREAVNDTV 452
Query: 426 QDYV-EYMGSEVRAILVPSIRDANHDFVLPQPPFD---IQPPDIIHQITSLTNPGTFEAN 481
+ Y G + ++VPS+RD HD ++PQPPF +QP + ++ +NPGTF N
Sbjct: 453 HKLLNSYSGLHI--VIVPSLRDVVHDKIMPQPPFPEELVQPHE---RLMLCSNPGTFVIN 507
Query: 482 QIKVGCCTVDVLKQLSGEEMSRCSKDGTSND--RMEIYSLDISLMGPAFFFYPLYPPAEG 539
++ +G T D+L LS EE +R TS+ R+ + LD FYPL+PPA G
Sbjct: 508 EVTIGIITSDILFHLSSEETARARAGDTSDRLARLAGHLLDQR------SFYPLFPPALG 561
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
+ + ++ L + PD++ILPSD+K+F K++ ++ VCVNPGRL + +
Sbjct: 562 TNTELT-HRKQLDLPVTPDVLILPSDLKFFAKIV-----------QQTVCVNPGRLTRDK 609
Query: 600 GSGTFAEI 607
GT+A++
Sbjct: 610 TGGTYAKL 617
>gi|432091137|gb|ELK24349.1| DNA polymerase alpha subunit B [Myotis davidii]
Length = 622
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/431 (31%), Positives = 221/431 (51%), Gaps = 64/431 (14%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
+FM+ + D L +I + + L E T V +Q + +G I CD +G LN
Sbjct: 206 KFMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPVLVPAQEPVTLLGQIGCDSNGKLN 265
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+KSV+L+ EHS G RV +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 266 NKSVILEGDREHSSGARVPVDLSELKEYSLFPGQVVVMEGINTTGRQLVATKLYEGVPLP 325
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
D +Q + +++A GP+TT+D++ ++PL +LI+
Sbjct: 326 FYQPADEDGDFEQKM-----------------VLVACGPYTTSDSITYDPLLDLITIINH 368
Query: 385 KQPQLLIL--------------------------LGPFVDSEHPQIKKGTTDSSFDEIFH 418
+P + IL GPF+D++H Q++ S F+++F
Sbjct: 369 DRPDVCILDPGRCVITPSSELSSFSVRSTAVSSVFGPFLDAKHEQVENCLLTSPFEDVFK 428
Query: 419 LEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ-PPDIIHQITSLTNPGT 477
+ LR + + GS + + VPS+RD +H+ V PQPPF+ P + ++ +++P +
Sbjct: 429 -QCLRTIIEGTRSSGSHL--VFVPSLRDVHHEPVYPQPPFNYDLPHEDKKRVQFVSDPCS 485
Query: 478 FEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA 537
N + G + D+L + EE+S S GTS+ I ++ +YPLYPP
Sbjct: 486 LSINGLVFGLTSTDLLFHMGAEEIS--SASGTSDRFSRILKHILTQRS----YYPLYPPQ 539
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
E + +D+ + PD++I+PS+++YF+K + LG CVCVNPGRL K
Sbjct: 540 EDMAIDYENFYAYAQLPVTPDVLIVPSELRYFVKDV-LG----------CVCVNPGRLTK 588
Query: 598 GEGSGTFAEIY 608
G+ GT+ +Y
Sbjct: 589 GQVGGTYGRLY 599
>gi|390332265|ref|XP_003723454.1| PREDICTED: DNA polymerase alpha subunit B-like isoform 1
[Strongylocentrotus purpuratus]
Length = 604
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 194/358 (54%), Gaps = 43/358 (12%)
Query: 252 VGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHC 311
VG ICCD +G LN +SV+++ SVE S G++V + L ++ E+SLFPGQVV ++G N +G
Sbjct: 260 VGRICCDSNGRLNAQSVMMEGSVETSAGKQVAVSLAEVKEYSLFPGQVVAMDGVNSAGVK 319
Query: 312 LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLY 371
+ASK ++P + E T + +++AAGPF+T+DNL
Sbjct: 320 FVASK--------------IYP----GVAGEFKPTDCSEATGNLHLLVAAGPFSTSDNLS 361
Query: 372 FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEY 431
EPL++LI K+ +P ILLGPFVD EH QIK G+ S+D++F +I++ + E
Sbjct: 362 LEPLEDLIKVIKKTRPDACILLGPFVDVEHGQIKDGSLGESYDKVFS-DIVQAIVRKTES 420
Query: 432 MGSEVRAILVPSIRDANHDFVLPQPPFD--IQPPDIIHQITSLTNPGTFEANQIKVGCCT 489
+G E+ I PS+RDA+H F+ PQPP+ P +H + P N I + +
Sbjct: 421 VGCEL--IFQPSLRDAHHHFIYPQPPYSEIKNQPKRVHFV---AEPEMININGINIATTS 475
Query: 490 VDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQE 549
D+L LS EE+S C S+DR+ I FYPLYP +E +P+D+ +
Sbjct: 476 TDILFHLSREEIS-CPPG--SSDRLGRLVRHILTQ---HNFYPLYPASEEVPVDYEKFHQ 529
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+ P I + PS +++F+K E + VC+NPG L G+ GT+A +
Sbjct: 530 YGKMGCAPHIFVCPSRLRFFVK-----------EIESAVCINPGLLTSGQVGGTYARL 576
>gi|443709652|gb|ELU04244.1| hypothetical protein CAPTEDRAFT_95153, partial [Capitella teleta]
Length = 465
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 213/426 (50%), Gaps = 49/426 (11%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
RFM+ + D+ + L RI A+ L S E+ + +Q VG ICCD +G LN
Sbjct: 82 RFMFQKLTDKAHVLNERIEDLASTLKESNQLEDFAHIGLPAQDDTMVVGRICCDCNGKLN 141
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+SV+L+ S G RV +DL +L +++LFPGQ+V + G+N SG +A +L LP
Sbjct: 142 AQSVILEGCRGVSAGCRVPVDLSQLPQYALFPGQIVAMRGTNSSGRKFVAKELFQPTALP 201
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
+ D P+M+ V + + ++ A GPF T+D+ FEPL +L+ Y
Sbjct: 202 LP---DHEPNMENG--------KVTHKFWPLDIVTAVGPFMTSDSTSFEPLDDLLKYVTE 250
Query: 385 KQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSE-VRAILVPS 443
P++ ILLGPF+DS++ ++++ + I + Y+ E + +LVPS
Sbjct: 251 HSPRVCILLGPFLDSKNSELEENG----------IPIFSFFSSLIFYISLETTKFVLVPS 300
Query: 444 IRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
RD +H V PQPPF P + + ++P T + + +G + D+L L EE+S
Sbjct: 301 QRDVHHLPVYPQPPFSFSKP--VSGLYFASDPSTLSIDGVIIGITSTDILFHLGAEEISM 358
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
R+ + + +YPLYPP+E + +D+ + + T P ++ILP
Sbjct: 359 PPGGADRLSRLANHVITQRS------YYPLYPPSEDVSIDYEHWEAHSKLPTTPHLLILP 412
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSP------EMMN 617
SD++YF +L G C CVNPGRL KG+ +GTFA + P E +
Sbjct: 413 SDLRYF----NLSG---------CCCVNPGRLTKGQVAGTFAHLVVRPGPKGVMLSERIA 459
Query: 618 ASIISI 623
A I+ I
Sbjct: 460 AKIVRI 465
>gi|115803045|ref|XP_780208.2| PREDICTED: DNA polymerase alpha subunit B-like isoform 2
[Strongylocentrotus purpuratus]
Length = 604
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 194/358 (54%), Gaps = 43/358 (12%)
Query: 252 VGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHC 311
VG ICCD +G LN +SV+++ SVE S G++V + L ++ E+SLFPGQVV ++G N +G
Sbjct: 260 VGRICCDSNGRLNAQSVMMEGSVETSAGKQVAVSLAEVKEYSLFPGQVVAMDGVNSAGVK 319
Query: 312 LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLY 371
+ASK ++P + E T + +++AAGPF+T+DNL
Sbjct: 320 FVASK--------------IYP----GVAGEFKPTDCSEATGNLHLLVAAGPFSTSDNLS 361
Query: 372 FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEY 431
EPL++LI K+ +P ILLGPFVD EH QIK G+ S+D++F +I++ + E
Sbjct: 362 LEPLEDLIKVIKKTRPDACILLGPFVDVEHGQIKDGSLGESYDKVFS-DIVQAIVRKTES 420
Query: 432 MGSEVRAILVPSIRDANHDFVLPQPPFD--IQPPDIIHQITSLTNPGTFEANQIKVGCCT 489
+G E+ I PS+RDA+H F+ PQPP+ P +H + P N I + +
Sbjct: 421 VGCEL--IFQPSLRDAHHHFIYPQPPYSEIKNQPKRVHFV---AEPEMININGINIATTS 475
Query: 490 VDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQE 549
D+L LS EE+S C S+DR+ I FYPLYP +E +P+D+ +
Sbjct: 476 TDILFHLSREEIS-CPPG--SSDRLGRLVRHILTQ---HNFYPLYPASEEVPVDYEKFHQ 529
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+ P I + PS +++F+K E + VC+NPG L G+ GT+A +
Sbjct: 530 YGKMGCAPHIFVCPSRLRFFVK-----------EIEGAVCINPGLLTSGQVGGTYARL 576
>gi|302824723|ref|XP_002994002.1| hypothetical protein SELMODRAFT_23326 [Selaginella moellendorffii]
gi|300138164|gb|EFJ04942.1| hypothetical protein SELMODRAFT_23326 [Selaginella moellendorffii]
Length = 241
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 159/252 (63%), Gaps = 14/252 (5%)
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--SSFDE 415
I+A+GPFTT+DNL FEPL EL++YA+ K+P +L+L+G F D+EHP +K+G TD D
Sbjct: 1 IVASGPFTTSDNLSFEPLMELLAYARNKRPNVLLLMGLFFDAEHPHVKQGITDRVGRLDL 60
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD-IQPPDIIHQITSLTN 474
+F E+ + L+DY +++G+ R IL+PS RD HD + PQPPF+ D QI+ L N
Sbjct: 61 LFQ-ELRKILEDYCQFLGAGARVILIPSTRDVFHDRIFPQPPFNSFMFEDSSQQISLLPN 119
Query: 475 PGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLY 534
P F +++ +GCCT D+L+ LS EE +R + GTS+DRM L L+G FYPL+
Sbjct: 120 PSVFRLDEVSIGCCTTDILRHLSSEEAAR-NPPGTSSDRMS--RLGAQLVGQR-GFYPLF 175
Query: 535 PPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGR 594
PPA G L+ ++ AL PDII+L SD+ F+KV E+ + +NPGR
Sbjct: 176 PPALGTCLNLAVNPSALDFPCTPDIIVLSSDLVPFVKV------EPRTEKLTTLLLNPGR 229
Query: 595 LAKGEGSGTFAE 606
LAKG GTF E
Sbjct: 230 LAKGAMGGTFVE 241
>gi|355712602|gb|AES04403.1| polymerase , alpha 2 [Mustela putorius furo]
Length = 594
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 220/419 (52%), Gaps = 47/419 (11%)
Query: 192 SLMVHGSGPEPGCRF---MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G GPE R M+ + D + L +I + + L E V +Q
Sbjct: 188 SLKVLG-GPESLTRSYKSMFQKLPDIRDVLTCKIEELGSELKEHYKIEAFAPVLVPAQEP 246
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 247 ITLLGQIGCDTNGKLNSKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTT 306
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G IA+KL + +PLP + +Q + +++A GP+TT+D
Sbjct: 307 GRKFIATKLYEGLPLPFYQPTEEDGDFEQNM-----------------VLVACGPYTTSD 349
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ ++PL +LI+ R P + ILLGPF+D++H Q++ S F++IF + LR + +
Sbjct: 350 SITYDPLLDLIAVINRDLPDVCILLGPFLDAKHEQVESCLLTSPFEDIFK-QCLRTIIEG 408
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIH----QITSLTNPGTFEANQIK 484
GS R + VPS+RD + + V PQPPF D++ ++ ++ P + N +
Sbjct: 409 TRSSGS--RLVFVPSVRDVHREPVYPQPPFSYS--DLLRDDRKRVQFVSEPCSLAVNGVI 464
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
+G + D+L + EE+S S G S+ I ++ +YPLYPP E + +D+
Sbjct: 465 LGLTSTDLLFHMGAEEIS--STSGPSDRLSRILKHILTQRS----YYPLYPPQEDMAIDY 518
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGT 603
+ PD+ I+PS++KYF+K + LG C+CVNPGRL KG+ GT
Sbjct: 519 ENFYTYAQLPVTPDVFIIPSELKYFVKDV-LG----------CICVNPGRLTKGQVGGT 566
>gi|344295886|ref|XP_003419641.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B-like
[Loxodonta africana]
Length = 597
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 216/410 (52%), Gaps = 41/410 (10%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L ++ + + L E T V +Q + +G I CD +G LN+K
Sbjct: 208 MFQKLSDIREVLTCKVEELGSELKEHYKIEAFTPVQVPAQEPVTLLGQIGCDSNGKLNNK 267
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G LIA+KL + +PLP
Sbjct: 268 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINSTGRKLIATKLYEGMPLPFH 327
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q + +++A GP+TT+D++ ++PL +L++ +
Sbjct: 328 QPTEEDGDFEQKM-----------------VLVACGPYTTSDSITYDPLLDLVTVINHDR 370
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ SSF+++F + LR + + GS + + VPS+RD
Sbjct: 371 PDVCILFGPFLDAKHEQVENCLLTSSFEDVFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 427
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D ++ ++ P + N + G + D+L + EE+S
Sbjct: 428 VHHEPVYPQPPFSYTDLSRED-KERVQFVSEPCSLSINGVIFGLTSTDLLFHMGSEEISS 486
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S R+ + L +YPLYPP E + +D+ + PD+ I+P
Sbjct: 487 SSGTSDRFSRILKHVLT------QRSYYPLYPPQEDMAIDYENFYAYAQLPVTPDVFIIP 540
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSP 613
S+++YF+K + LG CVCVNPGRL KG+ GTF +Y P
Sbjct: 541 SELRYFVKDI-LG----------CVCVNPGRLTKGQVGGTFGRLYLRRQP 579
>gi|440907401|gb|ELR57555.1| DNA polymerase alpha subunit B [Bos grunniens mutus]
Length = 604
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 210/388 (54%), Gaps = 36/388 (9%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP ++M+ + D L +I + + L E V +Q
Sbjct: 194 SLKVLGH-PEPLTGSYKYMFQKLPDIREVLTCKIEELGSELKEHYKIEAFAPILVPAQEP 252
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ +EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 253 VTLLGQIGCDSNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYSLFPGQVVVMEGINTT 312
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A++L + +PLP H ++ D E+ +++A GP+TT+D
Sbjct: 313 GRKLVATRLYEGVPLP------FHQPDEEDGDS-----------EQFMVLVACGPYTTSD 355
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ F+PL +LI+ R +P + IL GPF+D++H Q++ SSF+++F + LR + +
Sbjct: 356 SITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDVFK-QCLRTIIEG 414
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----ITSLTNPGTFEANQIK 484
GS + I+VPS+RD +H+ V PQPPF D++ + + ++ P T N +
Sbjct: 415 TRSSGSHL--IIVPSLRDVHHEPVYPQPPFSCS--DLLREDKKRVRLVSEPCTLSINGVI 470
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
G + D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 FGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILRHILTQRS----YYPLYPPQEDMAIDY 524
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKV 572
+ PD+ I PS+++YF+KV
Sbjct: 525 ENFYLYAQLPVTPDVFIAPSELRYFVKV 552
>gi|75057604|sp|Q58D13.1|DPOA2_BOVIN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|61554916|gb|AAX46631.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Bos taurus]
Length = 604
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 210/388 (54%), Gaps = 36/388 (9%)
Query: 192 SLMVHGSGPEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
SL V G PEP ++M+ + D L +I + + L E V +Q
Sbjct: 194 SLKVLGH-PEPLTGSYKYMFQKLPDIREVLTCKIEELGSELKEHYKIEAFAPILVPAQEP 252
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
+ +G I CD +G LN KSV+L+ +EHS G ++ +DL +L E+SLFPGQVV +EG N +
Sbjct: 253 VTLLGQIGCDSNGKLNHKSVILEGDLEHSSGAQIPVDLSELKEYSLFPGQVVVMEGINTT 312
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G L+A++L + +PLP H ++ D E+ +++A GP+TT+D
Sbjct: 313 GRKLVATRLYEGVPLP------FHQPDEEDGDS-----------EQFMVLVACGPYTTSD 355
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
++ F+PL +LI+ R +P + IL GPF+D++H Q++ SSF+++F + LR + +
Sbjct: 356 SITFDPLLDLITIINRDRPDVCILFGPFLDAKHEQVESCLLTSSFEDVFK-QCLRTIIEG 414
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----ITSLTNPGTFEANQIK 484
GS + I+VPS+RD +H+ V PQPPF D++ + + ++ P T N +
Sbjct: 415 TRSSGSHL--IIVPSLRDVHHEPVYPQPPFSCS--DLLREDKKRVRLVSEPCTLSINGVI 470
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDF 544
G + D+L + EE+S S GTS+ I ++ +YPLYPP E + +D+
Sbjct: 471 FGLTSTDLLFHMGAEEIS--SSSGTSDRFSRILRHILTQRS----YYPLYPPQEDMAIDY 524
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKV 572
+ PD+ I PS+++YF+KV
Sbjct: 525 ENFYLYAQLPVTPDVFIAPSELRYFVKV 552
>gi|47225240|emb|CAG09740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 193/374 (51%), Gaps = 61/374 (16%)
Query: 242 TVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVG 301
+ ++ ++ +G ICCD G LN +SVLL++ + GGQ+V + L +L E+SLFPGQ
Sbjct: 15 STPAKDSITVLGQICCDSKGKLNAQSVLLEAGPDQ-GGQQVPVGLSELKEYSLFPGQ--- 70
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA 361
+PLP D+ M + E +++++A
Sbjct: 71 ------------------GVPLPF-YTSDLGGDMSK---------------EPVNILVAC 96
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEI 421
GP+T +D+L F+PL +LI R P + ILLGPFVDS+H QI+K +FD IF
Sbjct: 97 GPYTPSDSLTFDPLLDLIHVITRDGPDVCILLGPFVDSKHEQIEKAQVTETFDAIFS-RC 155
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFE 479
+ + D + G ++ + VPS RD +H + PQPPF + D ++T + +P T
Sbjct: 156 IESIVDGTKSTGCQL--VFVPSQRDVHHHCIYPQPPFALPNLSKDQSQRVTLVPDPCTLL 213
Query: 480 ANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEG 539
+ + G + D+L + EE+S C GT +DR +S + M FYPLYPP E
Sbjct: 214 IDNVAFGITSTDILFHMGAEEIS-C---GTGSDR---FSRILRHMLTQRSFYPLYPPVED 266
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
+ +DF Q + PD++ILPS+++YFIK + C+CVNPGRL KG+
Sbjct: 267 VNMDFEKFQSFGQMPITPDVLILPSELRYFIK-----------DVIGCICVNPGRLTKGQ 315
Query: 600 GSGTFAEIYYHGSP 613
GT+ + H SP
Sbjct: 316 VGGTYGRLLVHRSP 329
>gi|302850345|ref|XP_002956700.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
gi|300258061|gb|EFJ42302.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
Length = 1377
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 190/390 (48%), Gaps = 40/390 (10%)
Query: 245 SQRTLFAVGMICCDGDGH-LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + ++ G + + +G LN +S+LL+ E SGG RVRLD+ L + LFPGQ +
Sbjct: 361 SHQPVWVAGRVLAETEGAPLNSESLLLEGCREASGGARVRLDVSCLPAYRLFPGQSICAY 420
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G NP+G IA KLV + S SR +S+++AAGP
Sbjct: 421 GLNPTGGKFIAQKLVTHV-----PPPPPPSSTMVTAGATAGPNGAASREGGLSLVVAAGP 475
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILR 423
+ +++L + PL+EL+SY P +L+LLGPFVD EHP + D + + E++R
Sbjct: 476 YCLSEDLSYSPLEELLSYCNAHPPDVLLLLGPFVDQEHPGLL--AADRTAESFLREEVVR 533
Query: 424 RLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD-----IQPPDIIHQITSLTNPGTF 478
RL + + + AI+ P++RD VLPQPP + PPD + +L NP T
Sbjct: 534 RLAVWRAEHPAAMVAIM-PAVRDLTAMPVLPQPPMTAVAQAVGPPD---KAIALQNPATV 589
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE 538
+ VG C+ D+LK LS E SR + T+ + +L ++G +YPLYP
Sbjct: 590 SLGPLLVGACSTDLLKALSASEHSRMAPGTTAGGGERLPALASHVLG-QRSYYPLYPAPP 648
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVL---------------------SLGG 577
G LD S + L + PD+++LPSD+ F KVL S G
Sbjct: 649 GTCLDTSHYSQ-LQLPVAPDVLLLPSDLAPFAKVLTPATWMAGAPPDFMEAVNRTGSTGA 707
Query: 578 RNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
V +NPGRL++G GTFA +
Sbjct: 708 AAAVMSTAPVVVINPGRLSRGSAGGTFAHV 737
>gi|194388416|dbj|BAG60176.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 203/382 (53%), Gaps = 34/382 (8%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 1 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 60
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 61 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFY 120
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
+ +Q++ +++A GP+TT+D++ ++PL +LI+ +
Sbjct: 121 QPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINHDR 163
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P + IL GPF+D++H Q++ S F++IF + LR + + GS + + VPS+RD
Sbjct: 164 PDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFVPSLRD 220
Query: 447 ANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 221 VHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS- 278
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
S GTS+ I ++ +YPLYPP E + +D+ + PD++I+P
Sbjct: 279 -SSSGTSDRFSRILKHILTQRS----YYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIP 333
Query: 564 SDMKYFIKVLSLGGRNEGEEQK 585
S+++YF+KV G N QK
Sbjct: 334 SELRYFVKV----GLNSAFSQK 351
>gi|301114883|ref|XP_002999211.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
gi|262111305|gb|EEY69357.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
Length = 624
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 168/617 (27%), Positives = 279/617 (45%), Gaps = 73/617 (11%)
Query: 19 EGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAI 78
E + C++ C +++ D+ + W+ Y +N+QL D + F HL+ +Q
Sbjct: 20 EEDAASTCVSICTEFDMSSDDMAAQWDAYSMNQQLS-GAANSDGLVAFRSHLKQQQNAKA 78
Query: 79 IKEEPSLHIYSSKDVDM-ILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSD 137
P+ + ++ E E ++D L + LYS + S +A +SS
Sbjct: 79 QTTTPATASQKRRHSKTPVVKREAE--SQDKLES------LYS--VKSPEGKHARSFSSP 128
Query: 138 KPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTED---DIIKRIK-TGKKCSL 193
S V +R E + ++ + P + ++ D + K+I+ TG
Sbjct: 129 AGSNKV----QRKEGMFSPSSMQSPPGSSYEKRTDAGKSVADFNAHLRKQIEGTGANTGK 184
Query: 194 MVHGSGP------EPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTV-ASQ 246
V P P +MY R AL+ ++ ++ LV E P S
Sbjct: 185 PVDVKAPFPSRNLAPNSSYMYTPLFQRAIALDEQLVEYEE-LVKETFKLEALKPVGDPSP 243
Query: 247 RTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGS 305
+ VG I C+ +G LN ++ S + GGQRV LDL + F +FPG++V +EG
Sbjct: 244 AQVTVVGRIVCEAAEGKLNPSVAQIEGSRKTCGGQRVLLDLSAVPNFQIFPGKIVALEGV 303
Query: 306 NPSGHCLIASK-LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
P +A K ++ IP P P+ + E H + + ++ A GPF
Sbjct: 304 FPDTRSPLAVKRFLEPIPAPP---ATSSPARIREFQSE-HG-------KPVRVLTACGPF 352
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS-----SFDEIFHL 419
TTT N+ + PL +L+ A ++P +LIL+GPF+DS H + G SF+EIF
Sbjct: 353 TTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVKYDGMMLSFEEIFLF 412
Query: 420 EILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD-------IQPPDIIHQITSL 472
+++ L + + ++ ++VPS+RDANH++V PQPP + + + ++ +
Sbjct: 413 KVMTLLNNVLS-QDERIQIVIVPSLRDANHEYVYPQPPLNKKKACEAFEVAEYAKRVHFM 471
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
+NP TF N + G +DV+ QLS E+ R D+ + L ++ FYP
Sbjct: 472 SNPSTFSINGVVFGTSALDVVVQLSSNELYR----AQIRDQHRLLRLCEQVVD-QRSFYP 526
Query: 533 LYPP--AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
++PP + P+D ++ PDI++LPS + F GR K +C+
Sbjct: 527 MFPPPASSEAPIDLRYRKQ-FQFEQTPDILLLPSILNRFC------GR-----VKDSICI 574
Query: 591 NPGRLAKGEGSGTFAEI 607
NPG+L KGE GTFA I
Sbjct: 575 NPGQLCKGESGGTFAHI 591
>gi|343173004|gb|AEL99205.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 140
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 113/142 (79%), Gaps = 3/142 (2%)
Query: 406 KGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI 465
K T D SFDE+FH EI+ RL+D+VEYMGS R +LVPSIRDANHDFV PQPPFDI PP++
Sbjct: 1 KATFDRSFDEVFHQEIITRLRDHVEYMGSSTRVLLVPSIRDANHDFVFPQPPFDIYPPEL 60
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMG 525
QI+SLTNPG F+A+++ +GCC+VD+LK LSGEE+SR KDGTS DR+ L ++G
Sbjct: 61 KDQISSLTNPGIFDADKVTIGCCSVDILKHLSGEEISRNPKDGTSKDRLS--RLGTHIIG 118
Query: 526 PAFFFYPLYPPAEGIPLDFSLA 547
FYPLYPPAEG+PLDFS+A
Sbjct: 119 -QHSFYPLYPPAEGVPLDFSVA 139
>gi|346466585|gb|AEO33137.1| hypothetical protein [Amblyomma maculatum]
Length = 543
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 186/360 (51%), Gaps = 46/360 (12%)
Query: 250 FAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSG 309
F G + CD G LN S++L+ S SG V+LD+ KL ++SLFPGQV+ +G+NP+
Sbjct: 203 FVTGRVLCDSCGKLNASSLILEGSESSSG-HSVKLDVSKLTQYSLFPGQVIVGKGTNPTQ 261
Query: 310 HCLIASKLVD--QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTT 367
++ +L D +P P A PS+K L +++AAGPFTT+
Sbjct: 262 ETVVLKELFDGKMLPFPSQA-----PSLKGPL----------------QLVVAAGPFTTS 300
Query: 368 DNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQD 427
D L FEPL + +Y + QP + I++GPFVD H I+KG +D +F +I L +
Sbjct: 301 DTLSFEPLADFTAYIIKHQPHVCIMMGPFVDCRHELIQKGNLPDEYDSVFQSQI-NALAN 359
Query: 428 YVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGC 487
++ +++ +LVPS D +HD+V P PPF + IT NP + VG
Sbjct: 360 ALQNTRTQI--VLVPSDLDVHHDYVYPTPPFRLGKK--YENITCAPNPCLLDVGGYIVGA 415
Query: 488 CTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLA 547
+VDVL L EE+S K R+ + L FYPLYPP+E I +D S
Sbjct: 416 TSVDVLMHLGREEISFSPKMTDRLSRLTKHILT------QHSFYPLYPPSEDINVDLSHL 469
Query: 548 QEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++ ++ P +++LPSD++ F+K + + CVCVNP LAKG G F I
Sbjct: 470 DDSGRLTVTPHLLVLPSDLRGFVK-----------DVEGCVCVNPEHLAKGVVGGCFGRI 518
>gi|343173006|gb|AEL99206.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 140
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
Query: 406 KGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI 465
K T D SFDE+FH EI+ RL D+VEYMGS R +LVPSIRDANHDFV PQPPFDI PP++
Sbjct: 1 KATFDRSFDEVFHQEIITRLGDHVEYMGSSTRVLLVPSIRDANHDFVFPQPPFDIHPPEL 60
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMG 525
QI+SLTNPG F+A+++ +GCC+VD+LK LSGEE+SR KDGTS +R+ L ++G
Sbjct: 61 KDQISSLTNPGIFDADKVTIGCCSVDILKHLSGEEISRNHKDGTSKNRLS--RLATHIIG 118
Query: 526 PAFFFYPLYPPAEGIPLDFSLA 547
FYPLYPPAEG+PLDFS+A
Sbjct: 119 -QHSFYPLYPPAEGVPLDFSVA 139
>gi|148701242|gb|EDL33189.1| polymerase (DNA directed), alpha 2, isoform CRA_b [Mus musculus]
Length = 608
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 202/377 (53%), Gaps = 31/377 (8%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 241 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 300
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 301 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 360
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 361 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVACGPYTTSDSITYDPLL 403
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LI+ R QP + IL GPF+D++H Q++ S F+++F + LR + + GS +
Sbjct: 404 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK-QCLRTVIEGTRSSGSHL 462
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF + ++ ++ P + N + G + D+L
Sbjct: 463 --VFVPSLRDVHHEPVYPQPPFTFSELSREDKKRVQFVSEPCSLSINGVMFGLTSTDLLF 520
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ S GTS DR +S + + +YPLYPP E + +D+ +
Sbjct: 521 HIGAEEI--FSSSGTS-DR---FSRVLKHILTQRSYYPLYPPHEDMAIDYENFYTYAQLP 574
Query: 555 TIPDIIILPSDMKYFIK 571
PD+ I+PS+++YF+K
Sbjct: 575 VTPDVFIVPSELRYFVK 591
>gi|255708463|ref|NP_001157529.1| DNA polymerase alpha subunit B isoform 2 [Mus musculus]
gi|26352896|dbj|BAC40078.1| unnamed protein product [Mus musculus]
Length = 566
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 202/377 (53%), Gaps = 31/377 (8%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 199 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
+LI+ R QP + IL GPF+D++H Q++ S F+++F + LR + + GS +
Sbjct: 362 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFK-QCLRTVIEGTRSSGSHL 420
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ VPS+RD +H+ V PQPPF + ++ ++ P + N + G + D+L
Sbjct: 421 --VFVPSLRDVHHEPVYPQPPFTFSELSREDKKRVQFVSEPCSLSINGVMFGLTSTDLLF 478
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS 554
+ EE+ S GTS DR +S + + +YPLYPP E + +D+ +
Sbjct: 479 HIGAEEI--FSSSGTS-DR---FSRVLKHILTQRSYYPLYPPHEDMAIDYENFYTYAQLP 532
Query: 555 TIPDIIILPSDMKYFIK 571
PD+ I+PS+++YF+K
Sbjct: 533 VTPDVFIVPSELRYFVK 549
>gi|348683854|gb|EGZ23669.1| hypothetical protein PHYSODRAFT_480522 [Phytophthora sojae]
Length = 629
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 169/623 (27%), Positives = 283/623 (45%), Gaps = 80/623 (12%)
Query: 19 EGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAI 78
E + C++ C + L D+ + W+ Y +N+QL D + F HL+ +Q +A
Sbjct: 20 EEDAASTCVSICTEFGLSSDDMAAQWDAYSMNQQLS-GAASADGLVAFRSHLKQQQAKAK 78
Query: 79 IKEEPSLHIYS------SKDVDMILNDEDENIAEDILGTPPDNLK----LYSDALDSTYK 128
KE + S ++ D + ++D LG+ N+K ++ S
Sbjct: 79 AKETAPVPASQKRRHPKSAATPVVKRDTE---SQDALGSLYSNMKSPEGKHARPFSSPTG 135
Query: 129 ANANGYSSD--KPSKLVTPFG----RRTE--KLVVKFNINNLPNTENGCIEHDDENTEDD 180
+N +SD P+ L +P G +RT+ K V +FN + +E NT
Sbjct: 136 SNKVQRTSDMFSPTSLQSPPGNSYEKRTDAGKTVSEFNAH-----LRKQLEGQGPNTGRP 190
Query: 181 IIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTD 240
+ K S P +MY R AL+ ++ ++ + EE
Sbjct: 191 V--------KVSAPFPSRNLAPNASYMYTPLFQRAIALDEQLVEYEELVKEKFKLEELKP 242
Query: 241 PTVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQV 299
S + VG I C+ +G LN V L+ + + GGQRV LDL + F +FPG++
Sbjct: 243 VGDPSPAQVAVVGRIVCEAAEGKLNPSVVQLEGTRKTCGGQRVLLDLSGVPNFQVFPGKM 302
Query: 300 VGIEGSNPSGHC-LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMI 358
V +EG P + + ++ IP P P+ + + E H + + ++
Sbjct: 303 VALEGVFPDTRSPMTVKRFLEPIPAPPATST---PARIKEIQGE-HG-------KPVRVL 351
Query: 359 IAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS-----SF 413
A GPFTTT N+ + PL +L+ A ++P +LIL+GPF+DS H + G SF
Sbjct: 352 TACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVRYDGMMLSF 411
Query: 414 DEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD-------IQPPDII 466
+EIF +++ L + +E ++ ++VPS+RDANH++V PQPP + + +
Sbjct: 412 EEIFLFKVMTLLNNVLE-KDQRIQIVIVPSLRDANHEYVYPQPPLNKKKACEAFEASEYA 470
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
++ ++NP TF N + G +DV+ QLS E+ R ++ N + + +
Sbjct: 471 KRVHFMSNPSTFSINGVVFGTSALDVVVQLSSNELFR-AQSRNHNRLLRLCEEIVDQRS- 528
Query: 527 AFFFYPLY--PPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQ 584
+YP++ PP+ P+D ++ PDI++LPS + F GR
Sbjct: 529 ---YYPMFPPPPSSEAPIDLRYMKQ-FQFEQTPDILLLPSILNRFC------GR-----V 573
Query: 585 KKCVCVNPGRLAKGEGSGTFAEI 607
K + +NPG+L KGE GTFA I
Sbjct: 574 KDSISINPGQLCKGESGGTFAHI 596
>gi|325180869|emb|CCA15279.1| DNA polymerase subunit alpha B putative [Albugo laibachii Nc14]
Length = 624
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 166/620 (26%), Positives = 272/620 (43%), Gaps = 68/620 (10%)
Query: 11 KNGF---NFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFM 67
+N F N E L + C +++L +L + W+ + +N Q ++ +D
Sbjct: 10 RNAFAACNLDVEETALPQFQCLCADFSLTLEELTAEWDAFSMNHQFQDAA----NLDMLS 65
Query: 68 LHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTY 127
+ + + +E S + I E L P S +++
Sbjct: 66 MFRSSMTQRKGAQESRKRKQQSRSSLTPIFKRE--------LRLSPSRSTPKSKRKSASF 117
Query: 128 KANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKT 187
A +NG P+ + +P G N +N N H ++ K I+
Sbjct: 118 SA-SNGSELFSPNSIASPPGNTYA------NRSNAGTIVNEFNAHLKPKLVQEMQKPIRA 170
Query: 188 GKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQR 247
+ S + +M+ R AL+ ++ ++ + EE S
Sbjct: 171 AQIASDRSDTMAID--ATYMFTPLYQRALALDQQLEEYEELVKVKYALEELGAIGNPSSA 228
Query: 248 TLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSN 306
+ VG I C+ +G +N V L+ S GGQRV LDL L F LFPG++V +EG
Sbjct: 229 IVTIVGRILCEASEGRMNANVVELEGSRRSCGGQRVLLDLSGLSSFQLFPGKIVALEGVY 288
Query: 307 PSGHCLIASK-LVDQIPLPVDAVV--DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
+A K +D +P PV D+ P + ++ E H + + +A+GP
Sbjct: 289 ADVRGSMAVKRFLDSLPAPVATSRKEDLEPFLTES---EFH---------PLRIFLASGP 336
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS-----SFDEIFH 418
FTT DN+ F+PL +L+ +++P ++IL+GPFVD+ HP K G SF++IF
Sbjct: 337 FTTADNIAFQPLDDLLRIVIKERPHVVILIGPFVDASHPSFKDGQAMYDGMLLSFEDIFI 396
Query: 419 LEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQP-PDII-----HQITSL 472
++L L D +E++ ILVPS+RDA+H FV PQPPF Q D I +++ +
Sbjct: 397 FKVLASL-DKALAPHTELQFILVPSLRDAHHHFVYPQPPFHPQTKKDAIDNAHANRVHFM 455
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
NP TF N + G ++DV+ +LS E+ R SN + + I+ F P
Sbjct: 456 ANPCTFSINNVLFGVSSLDVILELSSNELYRAPATQQSNRLLRLSEQVITQKS----FCP 511
Query: 533 LYPPAEGIPLDFSLA-QEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
+PP+ + L Q+ + PDI+ILPS + F GR + + +N
Sbjct: 512 CFPPSSQTEMSLDLRFQKCFQLHRTPDILILPSILSRFT------GR-----VRDSIILN 560
Query: 592 PGRLAKGEGSGTFAEIYYHG 611
PG++ KG+ GT+A + G
Sbjct: 561 PGQMCKGQSGGTYAVLTIDG 580
>gi|403294139|ref|XP_003938060.1| PREDICTED: DNA polymerase alpha subunit B [Saimiri boliviensis
boliviensis]
Length = 662
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 222/466 (47%), Gaps = 99/466 (21%)
Query: 207 MYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDK 266
M+ + D L +I + + L E T +Q + +G I CD +G LN+K
Sbjct: 209 MFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNK 268
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
SV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N SG L+A+KL + + LP
Sbjct: 269 SVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTSGRKLVATKLYEGVALPF- 327
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
P+ + D + T+V+ +A GP+TT+D++ ++PL +LI+ +
Sbjct: 328 ----YQPTEE---DGDFEQTMVL---------VACGPYTTSDSITYDPLLDLIAVINHDR 371
Query: 387 PQLLILLGPFVDSEH-----------------PQIK---KGTTDSSFD----------EI 416
P + IL GPF+D++H PQ++ +G F+ +
Sbjct: 372 PDVCILFGPFLDAKHEQVECQRLKEVGIGGKMPQLRALYQGVAGRLFNACKLHLHKRFSV 431
Query: 417 FHLEILRRLQD-------YVEYMGSEVRAIL------------------------VPSIR 445
F +E Q+ V+ G E+ I+ VPS+R
Sbjct: 432 FSVESHTEQQESVPGRLSLVQMDGCELEQIVLHFQGPMGNSISVHNRLSGSHLVFVPSLR 491
Query: 446 DANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
D +H+ V PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S
Sbjct: 492 DVHHEPVYPQPPFSYSDLSREDK-KQVHFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS 550
Query: 503 RCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIIL 562
S GTS+ I ++ +YPLYPP E + +D+ + PDI I+
Sbjct: 551 --SSSGTSDRFSRILKHILTQRS----YYPLYPPQEEMAIDYETFYVYAQLPVTPDIFII 604
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
PS+++YF+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 605 PSELRYFVKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 639
>gi|357628416|gb|EHJ77759.1| DNA-directed DNA polymerase alpha 2 [Danaus plexippus]
Length = 586
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 197/408 (48%), Gaps = 45/408 (11%)
Query: 204 CRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHL 263
++ ++ ++ + +N IR + ++ + E +Q + G I CD D L
Sbjct: 199 AKYGFELLHEKASVFDNHIRYISQCIMKKNGFSETVSVRHKTQTEVLVAGRIECDADARL 258
Query: 264 NDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL 323
N KSV+LQ + E S Q V LDL + ++SLFPGQVV + G NP G+ +A +L
Sbjct: 259 NSKSVILQGTWEDSLSQTVPLDLDSVQQYSLFPGQVVVVRGINPRGNKFVARELFCDAAR 318
Query: 324 PV-DAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYA 382
PV D D+ ++K L SM++AAGP+TT++N+ +EPLK+ I+Y
Sbjct: 319 PVPDPTSDITNTLKGTL----------------SMVVAAGPYTTSNNMSYEPLKDFIAYL 362
Query: 383 KRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSE---VRAI 439
+P ++I+ GPFVD EH ++K + ++ F +L D + +G+ +
Sbjct: 363 NTHKPHVVIMTGPFVDCEHEKVKDNSMAETYKSFFD-----KLIDSLADIGNTSPFTKIY 417
Query: 440 LVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGE 499
+V S +DA H + P PP+ + I L +P T N VG + DVL ++ E
Sbjct: 418 IVSSHKDAFHVNIYPTPPYSSRKK--YPNIQFLPDPSTLNINGYIVGITSYDVLMSINQE 475
Query: 500 EMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDI 559
E+S G+ D++ S + +YP + D SL + P I
Sbjct: 476 EISH----GSVGDKLSRLSGHVLRQQ---CYYPTAGSLGSLAADGSLWAAHAQLPATPHI 528
Query: 560 IILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+++PS+ +YF+K E C+ +NP L+KG G GTFA +
Sbjct: 529 LVVPSNFRYFVK-----------EVNGCIVINPEHLSKGAGGGTFARL 565
>gi|321465942|gb|EFX76940.1| hypothetical protein DAPPUDRAFT_321802 [Daphnia pulex]
Length = 476
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 46/422 (10%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDG--HL 263
+M+ R D+F+ LE +I + + EE V +G ICCD L
Sbjct: 97 YMFSRMRDKFDMLEEQINVIGDLIKGKLGIEEFESNNVLKSDAFQTIGRICCDATSGSRL 156
Query: 264 NDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL 323
N S+LL+ + S GQ V LD+ +L EFS FPGQVV +EGSNP+G ++ + +
Sbjct: 157 NTASLLLEGTRMISSGQSVPLDVSQLKEFSFFPGQVVAVEGSNPTGKKMVVTSVTTP--- 213
Query: 324 PVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAK 383
P++ V S++ L+ +++A GPFT +D+L F PL E I
Sbjct: 214 PINPVFKTDVSLEGPLN----------------VMVACGPFTLSDDLEFAPLVEFIQQIN 257
Query: 384 RKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPS 443
P L+I++GPF+D ++ +++ G D ++ E F + +++ LQ + + V+ ++PS
Sbjct: 258 TILPHLVIIMGPFLDVKNKKVESGELDHTYQEQFEI-VMKELQTKIS---NHVQVCVIPS 313
Query: 444 IRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
RD ++ V P PPF Q + + ++P + + + D+L LS EE+S
Sbjct: 314 WRDVHYRAVYPTPPF--QQENKLPNFHFFSDPCVLNVEGVFIALTSTDILFHLSKEEISV 371
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
R+ +S + FYPL PPAE + +D A + ++ P ++++P
Sbjct: 372 APPGSDRMGRL------VSHLFSQQSFYPLNPPAEEMSVDMEHADDYCKLTFTPHLLLVP 425
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA--EIYYHGSPEMMNASII 621
SD+++FIK ++ CV +N R KG GT++ +I GS + A ++
Sbjct: 426 SDLRFFIKNVN-----------GCVVINSERAVKGISGGTYSRLQITGEGSSVQVKAEVV 474
Query: 622 SI 623
I
Sbjct: 475 RI 476
>gi|430812479|emb|CCJ30096.1| unnamed protein product [Pneumocystis jirovecii]
Length = 629
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 159/622 (25%), Positives = 278/622 (44%), Gaps = 89/622 (14%)
Query: 21 EVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQ--------N 72
E+L +CL+ Y++ P++L WE + L + +E + + + F +Q +
Sbjct: 27 EILMECLSILKLYSISPTELFYRWESWCL-KMGNEPELVLENIQLFKRDMQYILEKRSNS 85
Query: 73 EQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANAN 132
++K+++ ++ + + YS V + +I+ +N K S+ LDS++ +
Sbjct: 86 KKKQSVYYKDYNNNDYSPDLVHESSESYKMQVFSNIMSNKFENSKKLSNFLDSSHSSG-- 143
Query: 133 GYSSDKPSKLVTPFGRRTEKLVVKFNINN----LPNTENGCIEHDDENTEDDIIKRIKTG 188
P G + FNI+ + T N I + ++ D +
Sbjct: 144 -----------IPIGNNNYISITSFNISTNSGKVMETLNSHISFCNIRSDMD-----EKQ 187
Query: 189 KKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTD----PTVA 244
KK SL+ + + + MY + + L+++I L+ Y+ D P
Sbjct: 188 KKISLIANFDPKKYSFKIMYQKLSEASEVLDDKIDMFTEELIKH--YDLSQDDFGNPAHI 245
Query: 245 SQRTLFAVGMICCDGD--GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGI 302
S + AVG I CD D G LN S++L++S G RV L + L ++LFPGQ++G+
Sbjct: 246 SHNEIVAVGRIICDSDSGGRLNTTSIILETSRRFGAGSRVLLHVDSLRSYALFPGQILGV 305
Query: 303 EGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAG 362
+G N SG + + LP A D + +++++ P++I +A+G
Sbjct: 306 KGINSSGSYFSVREFLMLPLLPFSAT--------SLSDFKRYNSLLNGMPQKI--FVASG 355
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--------SSFD 414
P+T DN+ FEPL EL + + ++P + I +GPF+D HP I G + S D
Sbjct: 356 PYTVNDNILFEPLTELCNKIQEEKPDVSIFIGPFLDIRHPLISTGNFNIPSLKDDIGSLD 415
Query: 415 EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSL 472
++F I +L I++P ++DA H PQ F+ + + I +
Sbjct: 416 DLFKHCISSKLTRL------NCLVIMIPHVQDACCKHA-AWPQDCFNKKSLGLEKNIKCM 468
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
NP F N++ +G + D+L LS E+ + + R+ + + FYP
Sbjct: 469 PNPALFSLNEVIIGISSNDILMSLSKSEIIKSPLYSNALARLSYHVIQ------QRHFYP 522
Query: 533 LYPPA------EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKK 586
L+P +G LD + +PDI+ILPSD++YF K++S
Sbjct: 523 LFPGTAYESLIDGANLDIAFMGLGEFSDVLPDILILPSDLQYFAKIIS-----------D 571
Query: 587 CVCVNPGRLAKGEGSGTFAEIY 608
V +NPGRLAK + GT+A +Y
Sbjct: 572 TVVINPGRLAKKQAFGTYAVMY 593
>gi|126338934|ref|XP_001379826.1| PREDICTED: DNA polymerase alpha subunit B [Monodelphis domestica]
Length = 878
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 183/331 (55%), Gaps = 28/331 (8%)
Query: 243 VASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGI 302
V +Q + +G I CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +
Sbjct: 254 VPAQEPVTVLGQIGCDSNGKLNPKSVILEGDREHSLGVQIPVDLSELKEYSLFPGQVVVM 313
Query: 303 EGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAG 362
+G+N +G IA+KL + PLP Q +++ S ++ +++A G
Sbjct: 314 DGTNSTGKRFIATKLYEGAPLP----------FYQPTEEDGDS-------DQRMVLVACG 356
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEIL 422
P+TT+D++ ++P+ +LI R QP + ILLGPF+D++H Q++ SF+E+F + L
Sbjct: 357 PYTTSDSITYDPMMDLIGVISRDQPDVCILLGPFLDAKHEQVENCQLTISFEEVFK-KCL 415
Query: 423 RRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEA 480
+ + G+ + + VPS+RD +H V PQPPF P + ++ +++P T
Sbjct: 416 WSIIEGTRSSGTHL--VFVPSLRDVHHQPVYPQPPFSYPELPKEDKQRVHFVSDPCTLSV 473
Query: 481 NQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGI 540
N + +G + D+L + EE+S S R+ + L +YPLYPP E +
Sbjct: 474 NGVVLGLTSTDLLFHMGAEEISSSSSTSDRFSRILKHILT------QRSYYPLYPPFEEM 527
Query: 541 PLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
+DF + PD+ I+PS+++YF+K
Sbjct: 528 SIDFEHFYSYAQLPVTPDVFIVPSELRYFVK 558
>gi|307110154|gb|EFN58390.1| hypothetical protein CHLNCDRAFT_10114, partial [Chlorella
variabilis]
Length = 311
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 166/304 (54%), Gaps = 23/304 (7%)
Query: 252 VGMICCDGDG-HLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
VG +CCD +G LN +S+LL+ S + S G R RLD+ LFPGQVV + G+NPSGH
Sbjct: 1 VGRVCCDTEGGRLNAQSLLLEGSQKTSQGARARLDVSHCPTNRLFPGQVVAMLGTNPSGH 60
Query: 311 CLIASKLV---DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTT 367
C++AS+L+ PLP ++ +++ + + + ++ AAGPFT++
Sbjct: 61 CIVASQLLPGAAAAPLPCTSL------------EQLATYATATGARGVLVVAAAGPFTSS 108
Query: 368 DNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQD 427
++L + PL L+ Y +P +L+L+GPFVD EHP ++ G + +FD+I+ +L ++
Sbjct: 109 EDLEYAPLGALLDYCAGAKPDVLLLVGPFVDEEHPLVRGGLLEETFDDIYASRVLGQISR 168
Query: 428 YVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGC 487
+ + +G + +LVPS RD +H VLPQPP D + T+L NP T N+ VG
Sbjct: 169 FSKRVGGCTQVLLVPSTRDVHHHPVLPQPPLD-ELQAAAQSATALANPVTLRCNEAVVGV 227
Query: 488 CTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLA 547
D L EEM +N+R+ + + ++P++PP G PLD S A
Sbjct: 228 GAADWLMACIREEMPL---SVAANERLTALAAHLPAQS---SYFPIFPPPLGTPLDCSKA 281
Query: 548 QEAL 551
AL
Sbjct: 282 GAAL 285
>gi|388579274|gb|EIM19600.1| DNA polymerase alpha, subunit B [Wallemia sebi CBS 633.66]
Length = 560
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 238/532 (44%), Gaps = 94/532 (17%)
Query: 122 ALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDI 181
A DST KA+ + + S K L+T NT NG +E N+ D
Sbjct: 51 ASDSTPKASQSNFVSRKNPGLIT-------------------NTLNGHLEIAPNNSVFDT 91
Query: 182 IKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANAL--VSSGLYE-EP 238
+ L+ S + R+M+++ +R L+ RI AN + G +E E
Sbjct: 92 --------RVGLLSAVSLKKYKYRYMFEKLSERSAVLDERIDYFANRVKEFYKGSFEIEI 143
Query: 239 TDPTVASQRTLFAVGMICCDGD-GHLNDKSVLLQSSVEHSGGQRVRLDLHK--------- 288
DP + +Q +G IC + D L++ S++L++S G RV L
Sbjct: 144 GDPGMMNQSQTICIGRICKETDITKLDEDSIILETSKSLGSGARVPLRFSNECKVRGVPK 203
Query: 289 -LGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTV 347
G LFPG++VG+ GSN ++ PL V H Q L HST
Sbjct: 204 GSGGIRLFPGRIVGVLGSNRGAGYFGVEEIFTMPPL---GTVKTH---SQELYDMQHSTE 257
Query: 348 VISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKG 407
+ +S+I+AAGP+T NL +EP L++ +RKQP ++ILLGPFVD+ HP IKKG
Sbjct: 258 SLGS-SPMSVIVAAGPYTLDSNLDYEPFDALMTQVERKQPDVVILLGPFVDANHPMIKKG 316
Query: 408 TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVL-PQPPFDIQ----P 462
D +++F + I RL +E A+L+PS+RD +V+ PQ + P
Sbjct: 317 EVDLLTEDLFKMRIGSRLTRALEN-AKGCTAVLIPSVRDLITPYVVYPQNALPLNNLGLP 375
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKD----------GTSND 512
P + ++NP +F N++ G VD + EE + K+ T ND
Sbjct: 376 PR--QRCKCVSNPASFHVNEVLFGISNVDNFMHIRKEEFFKPLKEADEEENETNGATLND 433
Query: 513 RMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIS--------------TIPD 558
M+ DI +YP++P + + D +L L ++ IPD
Sbjct: 434 NMKNLCSDIIDQQ---IYYPMFPAPKELSQDVNLDVSHLELANFPNGKTSEDADERVIPD 490
Query: 559 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
I+ILPS +K F KV+ + +CVNP A+G+ SGTFA + H
Sbjct: 491 ILILPSILKNFAKVVD-----------QTICVNPWPTARGKNSGTFAHLSIH 531
>gi|384488367|gb|EIE80547.1| hypothetical protein RO3G_05252 [Rhizopus delemar RA 99-880]
Length = 512
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 210/383 (54%), Gaps = 30/383 (7%)
Query: 196 HGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMI 255
H P R+M+++ ++ + + +R+ L+S L+E+ + P SQ F G I
Sbjct: 156 HLQKPIEPYRYMFEKIREKADEMNDRL-DFMGQLLSDKLHEKFSAPIQQSQVATFTFGRI 214
Query: 256 CCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIA 314
C D +G LN +SV+L++S E G+R++LDL KL ++SLFPGQ+VG++G N +G+
Sbjct: 215 CSDASEGKLNAESVMLETSKELGMGKRIKLDLSKLQDYSLFPGQIVGVQGFNRNGNSF-Q 273
Query: 315 SKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEP 374
+ + PLP ++P+ + ++ + + I +I AAGPFT +L F+P
Sbjct: 274 VECIHMPPLPQK----INPA---------NLELISNGGKPIEIITAAGPFTLDGDLSFKP 320
Query: 375 LKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGS 434
L+ LI ++P +++L+GPFV ++HP I KG + +++F ++ +L+ ++ S
Sbjct: 321 LESLIQMCMEERPDIVLLMGPFVSAKHPLIAKGKITTLPEDLFREQVEVKLKHLLD-ACS 379
Query: 435 EVRAILVPSIRDANHDF-VLPQPPF-DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDV 492
+ +L+P D + + PQPP D+Q P +I L+NP + N V +DV
Sbjct: 380 NTQVLLLPHADDIIQTYPLFPQPPLKDLQHP----RIHLLSNPSSISVNGHVVSLANIDV 435
Query: 493 LKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALT 552
L +L+ +E+ + S +DR +S + + +YPL+P AE +D S + +
Sbjct: 436 LFRLAKQEIFKSS---VHSDR---FSRLVQHLIQQHTYYPLFPHAEEDSIDSSRLLD-IQ 488
Query: 553 ISTIPDIIILPSDMKYFIKVLSL 575
IS PDI+I+PS KYF+K + L
Sbjct: 489 ISWKPDILIIPSQFKYFVKAVML 511
>gi|428184561|gb|EKX53416.1| DNA polymerase alpha subunit B, partial [Guillardia theta CCMP2712]
Length = 731
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 166/653 (25%), Positives = 289/653 (44%), Gaps = 119/653 (18%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
E EI F+ G + + E++ +C+ C ++ +DL WE + +D + +
Sbjct: 6 EAEIVNTFKALGHDIQGQDELIGQCVELCETFDFSATDLGFRWESHADQLAID-GPPRVE 64
Query: 62 EMDGFMLHLQ---NEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKL 118
+ L +++ + + +Y+ + + M+ +A + G +LKL
Sbjct: 65 HLQALKLSFSRKSDKKGQRTSRRVGVSKLYTKESISMLQESLSSTMAANYGGDV--HLKL 122
Query: 119 YSDALDS----------TYKANANGYSSDK-------PSKLVTPFGR---------RTEK 152
+++ + +AN SS K PS+LV+P G R+ K
Sbjct: 123 EANSANQLPKDSFVTPLKRRANFQASSSSKLRCLPSTPSQLVSPMGETPDSAKYSGRSNK 182
Query: 153 LVVKFNINN-LPNT-ENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDR 210
L V ++N LP+ G E R + + L +G G R+M+++
Sbjct: 183 LQVFQSVNEALPSAPSRGSSESS----------RCEVKQLQGLTDNGRG---FGRYMFEK 229
Query: 211 TEDRFNALENRIRKHANALVSSGLYEEPTDPT----------VASQRTLFAVGMICCDGD 260
E + +L NR+ ++ + +V + +E + SQ + G IC +GD
Sbjct: 230 VEQKCISLRNRLMENTDRIVENEKLKEKAEKAGESFSLSPVNAPSQDLAWFCGRICVEGD 289
Query: 261 -GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
G +N SV +E G+RV+LDL + GEF++FPGQ+V I G+N G+C++A +
Sbjct: 290 SGLINATSVF----IEGVNGRRVKLDLSRSGEFAVFPGQIVVIHGTNADGNCIVAHSIHS 345
Query: 320 QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI 379
+P+ P+ + A+ E + +P +S++ A+GP+TT+ +L + PL +L+
Sbjct: 346 DASVPLMKT----PAGQMAIFNETKE-FLGGQP--LSIVAASGPYTTSADLNYSPLDDLL 398
Query: 380 SYAKRKQPQLLILLGPFVDSEHPQI--KKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVR 437
Y +++ P +L+L GPFVD +H + K T F + L + VR
Sbjct: 399 EYVRKESPDVLVLCGPFVDYQHRLLDPSKAGTPGGFSNGDPPDTL-----------TLVR 447
Query: 438 AILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
+L +A D+ + + NP F N++ VG T D+++ +
Sbjct: 448 NVLHSDQENA----------MDV-------SLCMMGNPCMFRINEVVVGVTTTDIVRHIC 490
Query: 498 GEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIP 557
G C ++ DR+ S I+ + FYPL+PPAEG L S L P
Sbjct: 491 G-----CESSISNGDRI---SRVINHLIQQKSFYPLFPPAEGAQLAMSNYHH-LEFQNTP 541
Query: 558 DIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
D++I+PS + + K S +CVNPGRL KG +GTFA++ H
Sbjct: 542 DVLIVPSHLCAYAKRAS-----------DVLCVNPGRLVKGNTAGTFAKLTIH 583
>gi|380025274|ref|XP_003696402.1| PREDICTED: DNA polymerase alpha subunit B-like [Apis florea]
Length = 531
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 198/406 (48%), Gaps = 55/406 (13%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA--------SQRTLFAVGMICC 257
+MY+ + L NR + L + P++ + SQ T G I
Sbjct: 139 YMYEMLFKQGVFLSNRCKSFGERLCYTWNEMGPSNSNMRYVRNIMCISQTTFRTWGRIFI 198
Query: 258 DGDGHLNDKSVLLQSSVEHSGGQR---VRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIA 314
D K V+L+ S + G + +RLDL + +SLFPGQ++ +EG N +G LI
Sbjct: 199 MDDTSTGSKIVMLEGSKTNVGEKNAPVIRLDLSGVKHYSLFPGQIIAVEGFNTTGDTLIV 258
Query: 315 SKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEP 374
+L V + K ++D +I+ +A GPFT++DNL ++P
Sbjct: 259 KQLF------VKGYAQLFDEPKLSIDIKIY--------------VAVGPFTSSDNLNYQP 298
Query: 375 LKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGS 434
L +L++ ++P +LIL+GPF++ HP+IKK T ++ + F +++ LQ Y++ G
Sbjct: 299 LWDLMNRVVEEEPNILILIGPFIEYTHPEIKKCTLKETYQDFFDTILMKILQ-YLQ--GK 355
Query: 435 EVRAILVPSIRDANHDFVLPQPPFDIQPPDI---IHQITSLTNPGTFEANQIKVGCCTVD 491
R +LV S RDA+HD + P P F I I + + S+ +P + + +G +VD
Sbjct: 356 STRIVLVSSNRDAHHDSIFPTPEFIINTNKIGSNVANLYSMPDPCIINIDNLYIGITSVD 415
Query: 492 VLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEAL 551
+L+ L +E+S + DR+ + I FYPLYPP G+ LD +L +
Sbjct: 416 ILRHLGQQEVS----NTPGMDRLGRLADHILSQTT---FYPLYPPLSGLNLDTTLWTKYA 468
Query: 552 TISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
P I+ILPSD+KY+ K L+ KC+ +NP RL K
Sbjct: 469 CFERQPHILILPSDVKYYCKSLN-----------KCLVLNPERLRK 503
>gi|412987890|emb|CCO19286.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 243/527 (46%), Gaps = 83/527 (15%)
Query: 109 LGTPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPN---- 164
L T ++L+++ + +D + + ++P L TPF TE N NLP+
Sbjct: 151 LMTMGEHLEMHDEDVDGKMEVKEVSAAEEEPL-LKTPFKETTEN----NNSMNLPSAFSV 205
Query: 165 ---TENGCIEHDDENTEDDIIKRIKTG------------KKCSLMVHGSGPEP-GCRFMY 208
T + + + +++K I G K+ +L + S P FM
Sbjct: 206 EMKTPGSYRKAKKKTSSSELVKTIFEGSSFKSSSSSNAEKEITLKIQTSSSSPHSTLFMR 265
Query: 209 DRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSV 268
DR ED+ L+N+ ++ E+ +G +CCD +D+
Sbjct: 266 DRIEDKVALLKNKFKELKEEEEQEEEEEQKGQ----------IIGRVCCDS----SDRQE 311
Query: 269 LLQSSVEHSGGQRVRLDLHKL-GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDA 327
L +E S G RV+L+L + E+SLFPGQ+V G+NP+G+C +A +
Sbjct: 312 L---QLESSDGSRVKLELRSVENEYSLFPGQIVKCVGANPTGYCFVAKE----------- 357
Query: 328 VVDVH--PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
+D + +KQ Q+I T M++ +GPFT D+L +EPL +++ A K
Sbjct: 358 -IDCYYFKQIKQEQHQQIQKT---------EMLLFSGPFTANDDLMYEPLDDVLHEASSK 407
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIR 445
P +++L+GPFV E+ T++ ++ + F ++++++ + + ++ +LVPS++
Sbjct: 408 NPSIVLLMGPFVSDENIN-HALTSNITYKQAFEQIVMKKVEAFAKQYPNK-HVVLVPSVK 465
Query: 446 DANHDF-VLPQPP-FDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
DA H + PQPP F+ +H + NP FE N I+V T D+LK LSG E
Sbjct: 466 DAFHRYCAFPQPPFFETSKCKNVHFV---ANPSAFEVNGIRVAVSTCDILKHLSGFERGG 522
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTIST---IPDII 560
K T + + + S M YPL+PP + A L + +PD+I
Sbjct: 523 KGKTSTEQQQTDRMTRLCSHMVGQMSMYPLFPPHPDAKFESHDATVPLRVGMDERVPDLI 582
Query: 561 ILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+L SD L+ GG K + VNPG++ +G +GTF +I
Sbjct: 583 VLTSD-------LAAGGWKNALSGNKTMFVNPGKVCRGVNAGTFCKI 622
>gi|167537209|ref|XP_001750274.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771264|gb|EDQ84933.1| predicted protein [Monosiga brevicollis MX1]
Length = 952
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 158/641 (24%), Positives = 272/641 (42%), Gaps = 101/641 (15%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
E++ F+ +D + L+ C T C NY +K LV W + + +L E D
Sbjct: 5 EDLVQAFRAQAIKNLD-ADTLESCATICTNYGMKAHQLVDRWSTFCIRAELPEKP-SVDS 62
Query: 63 MDGFMLHLQNE-QKEAIIKEEPS-------LHIY-SSKDVDMILNDEDENIAEDILG--- 110
+ L E Q+EA + P L + ++ ++ ++++ ++
Sbjct: 63 LRILTAELAKETQQEAEVPATPRSGGAGGMLSAFGANTEITAKVSEKQQSRKRSSQRRHQ 122
Query: 111 -TPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGC 169
P + +D ST + + PS V + R K V+ N P +
Sbjct: 123 FAEPTPKRAGADNSPSTPTRGTSASPASTPS--VKSYEERLNKDRVEVTFN--PAKRSTT 178
Query: 170 IEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANAL 229
+ D+ T ++ V + E RFMY++ DR ++ I L
Sbjct: 179 APNRDQRT------------PLTVAVFPNALEKTYRFMYEKLLDRAAIVDLLIDDRTEQL 226
Query: 230 VSSGLYEEPTDPTVA--------SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQR 281
+ +P P V +Q + +V D +VL+ V G
Sbjct: 227 IKKNKLLQPAVPAVGDDPKKEQETQERMASVAAPTQD--------NVLVAGRVCVDAGDD 278
Query: 282 VRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP---------VDAVVDVH 332
RL H + +VV +EGSN +G C+ A + P +D +
Sbjct: 279 GRLTAHNMVL------EVVAVEGSNSAGDCIHAKSIFSDASAPHARTRPSELLDYYFKDN 332
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
S +QALD +++A GPF+T+DNL ++PL +L+ + P +LIL
Sbjct: 333 SSEEQALD----------------IMVATGPFSTSDNLGYQPLIDLLVVVENNAPDVLIL 376
Query: 393 LGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV 452
LGPF+D E+ ++++ D +F ++F E++ ++ VE + S I +PS+RDA+HDFV
Sbjct: 377 LGPFIDIENKKVERADLDQTFTQLFD-EMIEKVWAKVEPL-SHTHVIFIPSLRDAHHDFV 434
Query: 453 LPQPPFDIQPPDIIHQ--ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTS 510
PQ P ++ Q I NP TF+ ++ G D+L LS +E S
Sbjct: 435 YPQGPLSSSHAKLLEQERIFWFPNPCTFKIQELVFGVSNTDILMHLSKQE----SAHNAG 490
Query: 511 NDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFI 570
+DRM + + +YPL PP + +PL+++ + + + PD++++PSD+++FI
Sbjct: 491 SDRMARLAHHLIQQRS---YYPLLPPDQSVPLNYAHI-DHVAMPVTPDVLLVPSDLRFFI 546
Query: 571 KVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHG 611
K E + +NPGRL K GT+ + H
Sbjct: 547 K-----------EVNGSLIMNPGRLTKYTMGGTYGRMVIHA 576
>gi|328857937|gb|EGG07051.1| hypothetical protein MELLADRAFT_77651 [Melampsora larici-populina
98AG31]
Length = 636
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 207/444 (46%), Gaps = 58/444 (13%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHL 263
R+M+++ DR + L+ ++ +N L EE +DP+V SQ ++AVG IC + D +
Sbjct: 187 RYMFEKLSDRSDVLDQKLEYFSNILADWHGIEEWSDPSVVSQEDIWAVGRICAETQDTKV 246
Query: 264 NDKSVLLQSSVEHSGGQRVRLDLHKL----------GEFSLFPGQVVGIEGSNPSGHCLI 313
+D + L++S G+RV L + G LFPG ++G++G N G
Sbjct: 247 SDNACWLETSRLGGYGRRVWLKWDEALKVHGVGSGEGGVGLFPGAIIGVKGRNGGGTYFS 306
Query: 314 ASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE--ISMIIAAGPFTTTDNLY 371
+++ P VD ++ L + + S EE I IA GPFTT DNL
Sbjct: 307 VQEILTMPP------VDPPTTLPTKLVEYLPSV------EETPIKFAIACGPFTTDDNLD 354
Query: 372 FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEY 431
F PL L++ + L+ILLGPF+DS HP IK G D + +F +I RL +
Sbjct: 355 FLPLDALLTQLATEHLDLVILLGPFIDSNHPLIKTGDIDDTPSTLFREKIATRLIK-LRT 413
Query: 432 MGSEVRAILVPSIRD--ANHDFVLPQPPFDIQPP--DIIHQITSLTNPGTFEANQIKVGC 487
+ R L+PS+RD A H PQ P + + P + I L NP T N++ +G
Sbjct: 414 SSPQTRIYLIPSLRDIIAPHA-AYPQSPLNFRDPALGLTSDIKCLPNPITITINEVVIGI 472
Query: 488 CTVDVLKQLSGEEMSR---CSKDGTSNDRMEIYSLDISLMGPAFF-----FYPLYPPAEG 539
VDVL + EE + DG SN+ + + DI FYPL+P G
Sbjct: 473 NNVDVLMSIRKEEFFKPALVQDDGESNEGPDPNARDIISRACRHVMRQRSFYPLFPATLG 532
Query: 540 IPLD---FSLAQEALTISTIP---DIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPG 593
+D + L I P DI+I+P+ F K++ V VNP
Sbjct: 533 AGIDQVNLDVTHHEL-IKYDPVGADILIMPTSFTAFAKIVD-----------STVIVNPR 580
Query: 594 RLAKGEGSGTFAEIYYHGSPEMMN 617
+L KG+G+GT+A HG PE N
Sbjct: 581 QLCKGQGTGTYARFTIHG-PEKTN 603
>gi|149575496|ref|XP_001519697.1| PREDICTED: DNA polymerase alpha subunit B, partial [Ornithorhynchus
anatinus]
Length = 439
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 153/261 (58%), Gaps = 24/261 (9%)
Query: 243 VASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGI 302
V +Q + +G I CD +G LN KSV+L+ EHS G +V LDL +L E+SLFPGQVV +
Sbjct: 127 VPAQEPVTVLGQIGCDSNGKLNPKSVILEGDREHSLGAQVPLDLSELQEYSLFPGQVVVM 186
Query: 303 EGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAG 362
EG+N +G LIA+KL +PLP Q+ +++ PE+ ++ A+G
Sbjct: 187 EGTNTTGKKLIATKLYQGVPLP----------FHQSAEED---------PEQRMVVAASG 227
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEIL 422
P+TT+D++ ++P+ +LI+ R +P + IL GPF+D++H Q++ S F+++F + L
Sbjct: 228 PYTTSDSITYDPMMDLIAVINRDRPDVCILFGPFLDAKHEQVESCQLTSPFEDVFK-QCL 286
Query: 423 RRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ--PPDIIHQITSLTNPGTFEA 480
R + + GS + + VPS+RD +HD V PQPPF P + ++ +++P T
Sbjct: 287 RTIIEGTRSSGSHL--VFVPSLRDVHHDLVYPQPPFSCYELPKEDRQRVLFVSDPCTLSV 344
Query: 481 NQIKVGCCTVDVLKQLSGEEM 501
N + G + D+L + EE+
Sbjct: 345 NGVVFGLTSTDLLFHMGSEEI 365
>gi|213405225|ref|XP_002173384.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
gi|212001431|gb|EEB07091.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 220/496 (44%), Gaps = 71/496 (14%)
Query: 130 NANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGK 189
NA G S+ KP +L G+ E L H N +++ + T +
Sbjct: 103 NAVGDSASKPVELSKESGKVLEIL------------------HPRPNNAENLNRAEHTTQ 144
Query: 190 KCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSS-GLY-EEPTDPTVASQR 247
S++ + R+MY + +D L++RI + G+ EE +P +Q
Sbjct: 145 SVSIVPEFEAAKFHYRYMYQKLQDSSEVLDDRIDAFSELTCQVLGIQDEELANPGELTQD 204
Query: 248 TLFAVGMICCDGD---GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
T+ VG I D G LN +S+LL++S G RV L L L FS+FPG+VV ++G
Sbjct: 205 TVIVVGRIVLDSSAPGGRLNAQSILLETSRRLGAGCRVPLRLDNLSGFSIFPGKVVALKG 264
Query: 305 SNPSGHCLIASKLVDQIPLPVDAVVDVHP-SMKQALDQEIHSTVVISRPEEISMIIAAGP 363
SNPSG AS+ V PLP+ A D P S A+D +T V ++A+GP
Sbjct: 265 SNPSGKVFTASEFVKIPPLPL-ATSDAQPTSDDMAVDAMSQNTRV---------LLASGP 314
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS----SFDEIFHL 419
+ DN + PL+ + + ++QP +IL+GPF+D HP I+ G + S + IF
Sbjct: 315 WCVRDNFEYTPLRAFVEHVVQEQPDAVILMGPFIDVHHPFIEIGVIPNAKADSVEGIF-- 372
Query: 420 EILRRLQDYVEYMGSEVR--AILVPSIRDANHDF-VLPQPPFDIQPPDIIHQITSLTNPG 476
Q +V + S + IL+P + + D V PQ D + NP
Sbjct: 373 ------QQFVTPILSRITCPCILIPHMNELVTDHPVWPQDSLDPNLLKLPSNFKCFPNPS 426
Query: 477 TFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP- 535
F N + G T D+L +S EE+ R K +++ S + FYPL+P
Sbjct: 427 VFSINDTRFGISTNDILLHMSKEELFRSPK------HTNLFTRLASNIIQQRHFYPLFPG 480
Query: 536 ----PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
LD S I+ P I+ILPS++ +F K + + V VN
Sbjct: 481 GSMEKGNSSNLDISHLPLGEFINVTPKILILPSELHHFAK-----------DVENVVSVN 529
Query: 592 PGRLAKGEGSGTFAEI 607
PG+ KG G+FA I
Sbjct: 530 PGKATKGVSFGSFARI 545
>gi|159463398|ref|XP_001689929.1| DNA polymerase alpha subunit two [Chlamydomonas reinhardtii]
gi|158283917|gb|EDP09667.1| DNA polymerase alpha subunit two [Chlamydomonas reinhardtii]
Length = 722
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 189/387 (48%), Gaps = 49/387 (12%)
Query: 245 SQRTLFAVGMICCDGDGH-LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + ++ G + + +G LN +S+LL+ E SGG RVRLD+ L + LFPGQ V
Sbjct: 341 SHQPVWVAGRVLAEAEGAPLNGESLLLEGCREASGGARVRLDVSCLPGYRLFPGQSVCAY 400
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G NP+G IA +LV + + +R +S+++AAGP
Sbjct: 401 GLNPTGSRFIAQRLVTHV----------------PPPPAASALPEAARSGGLSLVVAAGP 444
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILR 423
F +D+L + PL+EL++ P +L+LLGPFVD+EHP + G+ D + + +F E+LR
Sbjct: 445 FCLSDDLSYSPLEELLAACSASPPGVLMLLGPFVDAEHPGLASGSADRTAEAVFREEVLR 504
Query: 424 RLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD-----IQPPDIIHQITSLTNPGTF 478
RL + G+ L+P++RD V+PQPP + P D ++ +L NP T
Sbjct: 505 RLAAWRTAAGASTTLALMPAVRDVTAVPVVPQPPMTAAAAAVGPAD---KVVALQNPATA 561
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRME-IYSLDISLMGPAFFFYPLYPPA 537
+ V + DVLK LS E++R +E + +L ++G FYPLYP
Sbjct: 562 TMGPLVVAAGSGDVLKALSAAELARVPPAAAGAPPVERLPALAGHVLG-QRSFYPLYPAP 620
Query: 538 EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKK----------- 586
G LD S + + D+++LPSD+ F KVL R E
Sbjct: 621 LGTCLDTSHYSQLSLAAAP-DLLLLPSDLAPFAKVL----RPESWAASAPPGLVAAGGCA 675
Query: 587 ------CVCVNPGRLAKGEGSGTFAEI 607
V VNPGRL++G G+FA +
Sbjct: 676 AAAAAPVVVVNPGRLSRGGAGGSFAHV 702
>gi|328788469|ref|XP_001120826.2| PREDICTED: DNA polymerase alpha subunit B [Apis mellifera]
Length = 582
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 151/606 (24%), Positives = 266/606 (43%), Gaps = 86/606 (14%)
Query: 17 VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKE 76
+ + ++ KC+ FC YN+ + W Y + LD + ++ + L+ +
Sbjct: 10 ISDKSIIDKCVQFCHVYNIDEEKFLELWVAYTITHSLDINPTINNLIQFEDEELKKNNEC 69
Query: 77 AIIKEEPSLHIYSSKDVDMILND--EDENIAEDILGTPPDNLKLYSDALDSTYKANA--- 131
+ + ++H + + I+N+ E N E + S L++ K A
Sbjct: 70 VVTQTISNIHTLDIQPKEDIINNVLELYNTGECSTSKQIKRARSPSAELENDTKLRAIEQ 129
Query: 132 ----NGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKT 187
+ Y+S+ + +P K+++ F PN +N ++D E +
Sbjct: 130 IFPSSIYTSNLNVPIRSPNNTVKAKILLYFG----PNIQNWKTQNDYEVS---------- 175
Query: 188 GKKCSLMVHGSGPE--PGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVAS 245
+V P +MY+ + L +R + L + P++ +
Sbjct: 176 ------IVQADNPHIPKDAVYMYEMLFKQGVFLSSRCKSFGERLCYTWNEMGPSNSNMRY 229
Query: 246 QRTLFAV--------GMICCDGDGHLNDKSVLLQSSVEHSGGQR---VRLDLHKLGEFSL 294
R + + G I D K V+L+ S + G + +RLDL + +SL
Sbjct: 230 VRNIMCISQTAFRTWGRIFIMDDTSTGSKIVMLEGSKTNVGEKNAPIIRLDLSGVKHYSL 289
Query: 295 FPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
FPGQ++ +EG N +G LI +L V + K ++D +I+
Sbjct: 290 FPGQIIAVEGFNTTGDTLIVKQLF------VKGYAQLFDEPKLSVDIKIY---------- 333
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFD 414
+A GPFT +DNL ++PL +L++ ++P +LIL+GPF++ HP+IK T ++
Sbjct: 334 ----VAVGPFTPSDNLNYQPLWDLMNRVAEEEPNILILIGPFIEYTHPEIKNCTLKETYQ 389
Query: 415 EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI---IHQITS 471
+ F +++ LQ Y++ G R +LV S RDA+HD + P P F I I + S
Sbjct: 390 DFFDAILMKILQ-YLQ--GKSTRIVLVSSNRDAHHDSIFPTPEFIINTNKIGSNSANLYS 446
Query: 472 LTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFY 531
+ +P + + +G +VD+L+ L +E+S + DR+ + I FY
Sbjct: 447 MPDPCIINVDNLHIGITSVDILRHLGQQEVS----NTPGMDRLGRLADHILSQTT---FY 499
Query: 532 PLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
PLYPP G+ LD +L + P I+ILPSD+K++ K+L NE + +N
Sbjct: 500 PLYPPFSGLNLDTTLWTKYACFERQPHILILPSDVKHYCKLL-----NES------LVLN 548
Query: 592 PGRLAK 597
P RL K
Sbjct: 549 PERLRK 554
>gi|392579381|gb|EIW72508.1| hypothetical protein TREMEDRAFT_66921 [Tremella mesenterica DSM
1558]
Length = 708
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 211/435 (48%), Gaps = 44/435 (10%)
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICC--DGD 260
G R+M+++ R AL++ I A+ + S E DP AS+ ++AVG I
Sbjct: 263 GYRYMFEKISQRSEALDDMIDDFADIIKDSYGITELGDPHFASEEDIYAVGRILSPPTDS 322
Query: 261 GHLNDKSVLLQSSVEHSGGQRVRLDLHK----------LGEFSLFPGQVVGIEGSNPSGH 310
++ +++ L+SS G+RV+L + F LFPG ++ ++G N G
Sbjct: 323 SKVSTQALYLESSRLLGSGRRVQLRFSPGIKVRGGAAGVKSFGLFPGCLICVKGRNGGGG 382
Query: 311 CLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNL 370
+A +++ P P+ H + L H + +P I ++ AAGPFT D+L
Sbjct: 383 VFVADEVLLPPPSPM------HLTTVPDLLAMQHGDKLAGQP--IFIMTAAGPFTLDDDL 434
Query: 371 YFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
+ PL+ L+ ++P +L+LLGPFVD+ HP I G + +EIF ++ RLQ +E
Sbjct: 435 LYHPLEALVEVVIAERPDVLVLLGPFVDANHPFIANGAVLQTSEEIFKDQVGSRLQRIIE 494
Query: 431 YMGSE-VRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCC 488
GS IL PS+RD + PQ D + I ++ ++ NP TF N+I +
Sbjct: 495 --GSPGTMIILSPSVRDTVSKHMAFPQAMLDKELLGIPKRVRTIPNPCTFSINEITISLS 552
Query: 489 TVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFF------FYPLYPPAEGIPL 542
+VDVL L EE+ + +++ + ++ + + G FYP++PP E
Sbjct: 553 SVDVLFHLRREELVQRAEEAEPDSELKGQEVKDPMAGLVRHVLGQRTFYPIFPPPEVHAT 612
Query: 543 DFSL---AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
+ +L L +S+ PD++ILPS +++F K++ + +NP L++
Sbjct: 613 EVNLDVTHHVLLKMSSAPDVLILPSKLRHFSKIVD-----------STLVINPSHLSRPH 661
Query: 600 GSGTFAEIYYHGSPE 614
GTFA++ H P
Sbjct: 662 TGGTFAKLVVHPLPR 676
>gi|189240313|ref|XP_001807778.1| PREDICTED: similar to polymerase (DNA-directed), alpha (70kD)
[Tribolium castaneum]
gi|270011548|gb|EFA07996.1| hypothetical protein TcasGA2_TC005585 [Tribolium castaneum]
Length = 539
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 205/433 (47%), Gaps = 74/433 (17%)
Query: 204 CRFMYDRTEDRFNAL--------ENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMI 255
C++M + D+ +AL + I++H L L + TV G +
Sbjct: 158 CKYMTESYLDKSSALCEMSRFVIVDIIKRHNLELTYEKLNTYSPEMTVC--------GKL 209
Query: 256 CCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIAS 315
+ D L S+ L+ + G+ ++L+L KL + SLF GQ V I G +I++
Sbjct: 210 YSNADDELEPNSIELEGHPDVYKGKTIKLNLSKLDKISLFSGQNVVI-----CGQGMIST 264
Query: 316 KLVDQI----PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLY 371
+V++I PLP IS E + +++AAGPFT +DNL
Sbjct: 265 FMVEKIYTGDPLP-------------------KPQTAISLNETLQIVVAAGPFTLSDNLL 305
Query: 372 FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIK--KGTTDSSFDEIFHLEILRRLQDYV 429
+EPL L Y + +P LL+L+GPFVD H +K T DS F+ I ++ RL+
Sbjct: 306 YEPLDSLSKYVVQFKPNLLVLMGPFVDKSHSCLKALNETYDSFFENIIS-GVMERLK--- 361
Query: 430 EYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCT 489
G+ V +LVPS +DA++ + P PF ++ + + NP + + + +G T
Sbjct: 362 ---GTGVHVVLVPSHKDAHNHVIFPSIPFRLR--RRYENLHLVPNPFILDIDGVTIGGST 416
Query: 490 VDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQE 549
D+L LS E S+ + D DR+ IS + FYPLYPP I +D L ++
Sbjct: 417 ADILFHLSKAECSKGTHDVPRVDRL------ISHIFHQRCFYPLYPPDNDIRVDHGLVEQ 470
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA--EI 607
+ T PDI+ LPS +K+F+KV + V VNP L+KG +G+FA E+
Sbjct: 471 HAMLETAPDIMFLPSRLKHFVKVC-----------EDSVVVNPASLSKGNSAGSFARLEV 519
Query: 608 YYHGSPEMMNASI 620
G+ +N I
Sbjct: 520 RAKGAQRPLNERI 532
>gi|223998634|ref|XP_002288990.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976098|gb|EED94426.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 719
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 184/732 (25%), Positives = 291/732 (39%), Gaps = 169/732 (23%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
++ EI + F G + ++ K + L P L +WE + L R +D + D
Sbjct: 5 LKNEITSAFTTVGLTSL-PAPLVTKLTGLSTSLRLTPRQLAEAWEAHSLTRNVD--VLDD 61
Query: 61 DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVD-------MILNDEDENIAEDILGTPP 113
G+ + A+ KE S + +S VD M + + A TP
Sbjct: 62 VTFGGY--------QSALAKEAESKGLIASSSVDSKRNVVVMQSSGLGKRTAPHSSVTPS 113
Query: 114 DNLKLYS----DALDSTYKANANGYSSDKPSKLVTPFGR--------------------- 148
K + A +T A+ +G S+ L TP G+
Sbjct: 114 PMAKRGAQTPQSASGATAPADRSGLSAV--DNLTTPSGKVPISPGMKHPGVASANQITPT 171
Query: 149 -----------RTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHG 197
T LV +N N+LP +E + +N ++ T K C++ H
Sbjct: 172 AKSAPKYQDRTGTGSLVTSYNPNSLPT----AVEVNAQNADN-----ATTQKTCTIQYHP 222
Query: 198 SG--PEPGC-----RFMYDRTEDRFNALENRI----------------------RKHANA 228
S P+P R M+ R ALE+RI +H +A
Sbjct: 223 SSTHPQPPTKSTPFRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSA 282
Query: 229 LVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLH 287
V T + Q + VG IC + +G LN S+ L+ S + S G R+ LDL+
Sbjct: 283 EVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLN 342
Query: 288 KL-------GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALD 340
L +S FPGQ+V +EG N SG + AS+L + +P PV+ + K+ +
Sbjct: 343 SLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVE-----KSTAKELIK 397
Query: 341 QEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSE 400
P +S++ GPFTT DNL ++PL +++ QP ++I+ GPFVD
Sbjct: 398 YNYGPDGQNGMP--LSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGR 455
Query: 401 HPQIKKG---TTDS-------SFDEIFHLEILRRLQD-YVEYMGSEVRAILVPSIRDANH 449
P ++ G TD S++ +F + L++ Y + + +LVPS D
Sbjct: 456 QPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMIC 515
Query: 450 DFVLPQPPF------------------------------DIQPPDIIHQITSLTNPGTFE 479
+ V PQPP +I+ + ++ ++NP T +
Sbjct: 516 ESVYPQPPLVNQEVTSGVKKFNDEFGNLGLNYVEIAGRENIKTSERTKRVHCVSNPCTLK 575
Query: 480 ANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEG 539
N++ VG + DVL +S +E + G R+ + + +YPL+P A+G
Sbjct: 576 INELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQ------QRSYYPLFPAAKG 629
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFI-KVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
LD S + E + PDI+I+PS + F KVL V VNPG L K
Sbjct: 630 ACLDLSRSDE-WEMPVQPDILIVPSKLTTFARKVLD-----------TTVVVNPGELTKN 677
Query: 599 EGSGTFAEIYYH 610
GT+A I H
Sbjct: 678 TTGGTYAVIDVH 689
>gi|321265257|ref|XP_003197345.1| alpha DNA polymerase [Cryptococcus gattii WM276]
gi|317463824|gb|ADV25558.1| Alpha DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 718
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 205/437 (46%), Gaps = 56/437 (12%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
R+M+++ +R AL++ I ++A+A+ + E DP S +++ VG I + +
Sbjct: 272 RYMFEKLSERSEALDDAIDEYADAIKDAYGLSELGDPHFVSDESIYTVGRILSNTTSSKS 331
Query: 265 DKSVL-----LQSSVEHSGGQRVRLDLHK-----------LGEFSLFPGQVVGIEGSNPS 308
DK L LQSS G+R+ L+L + + FSL+ G +V I+G N
Sbjct: 332 DKVALKNSFHLQSSRLIGAGKRIALELLEEKLQVRGGAPGVKGFSLYSGCLVCIKGRNGG 391
Query: 309 GHCLIASKLVDQIP-----LPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G +A +++ P P ++D K + E +S+++AAGP
Sbjct: 392 GSKFVAEEILLLPPSLLPQTPASELIDFQYGDKM-------------KGEPLSLVVAAGP 438
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILR 423
+T +NL FEP + L+ +P + ILLGPF+DS+HP IK + EIF +I R
Sbjct: 439 YTVNENLLFEPFETLVDKVLEDRPDVFILLGPFIDSQHPIIKSCAVTETPQEIFRKQISR 498
Query: 424 RLQDYVEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
RLQ V S V ILVPS+RD +H PQ + + + ++ +L NP TF N+
Sbjct: 499 RLQKVVTQSPSTV-IILVPSVRDIVSHHMAFPQSMLEKEYLGLPKKVKALPNPCTFSVNE 557
Query: 483 IKVGCCTVDVLKQLSGEEMS-RCSKDGTSNDRMEIYSLD-----ISLMGPAFFFYPLYPP 536
+ + +VD+L L R + D I + D I + FYP++PP
Sbjct: 558 VTISLSSVDILFHLGQAHAPIRAQEADPDPDMNGIPAPDPLANHIRQVLGQRSFYPIFPP 617
Query: 537 AEGIPLDFSL---AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPG 593
E + + +L L + PDI+ILPS + F K++ + +NP
Sbjct: 618 PEDVAGEVNLDVTHYPLLKMDQAPDILILPSRLNKFAKIVD-----------STLVINPS 666
Query: 594 RLAKGEGSGTFAEIYYH 610
+A+ +G +A+I H
Sbjct: 667 HIARARATGHYAKIIIH 683
>gi|19075265|ref|NP_587765.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe 972h-]
gi|6015008|sp|O74946.1|DPOA2_SCHPO RecName: Full=DNA polymerase alpha subunit B
gi|3169066|emb|CAA19261.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe]
Length = 574
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 195/421 (46%), Gaps = 54/421 (12%)
Query: 205 RFMYDRTEDRFNALENRI--------RKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
R MY + D L++RI RK+ +S P++ T + + +
Sbjct: 159 RIMYQKLYDSSEVLDDRIELFSALTCRKYN---ISDEDLANPSELTQEPVVVVGRIVVES 215
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
+ G LN S+LL+SS G RVRL + L +S+FPGQ+V ++GSNPSG+ IA
Sbjct: 216 TNLGGRLNQNSILLESSRRLGAGVRVRLKVDDLPSYSIFPGQIVSVKGSNPSGNMFIAK- 274
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
+ + + QE + V + + IS+ IA+GP++ D+L F PLK
Sbjct: 275 ---------EILPIPPLPFPSSSKQEHATFVANTNNQPISIYIASGPWSLRDDLSFSPLK 325
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIK----KGTTDSSFDEIFHLEILRRLQDYVEYM 432
+ISY + L+IL GPF+D H I+ GT+ +S +E+F + L
Sbjct: 326 SMISYVNKNPVDLVILCGPFLDINHILIRTGNITGTSATSLEELFKERVTPILSQLT--- 382
Query: 433 GSEVRAILVPSIRDANHDF-VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVD 491
IL+P I DA D PQ F+ + NP F N + G T D
Sbjct: 383 ---CPCILIPHINDAASDHPAWPQDAFNRVALGLPSNFKCFPNPCMFSINDVVFGVSTND 439
Query: 492 VLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA---EGIPLDFSLAQ 548
+L S EE+ R G R+ +S + FYPL+P + P + +A
Sbjct: 440 ILLHTSREELFRLPSHGNLFARL------VSHVLHQRHFYPLFPGGSLEKCNPSNLDIAH 493
Query: 549 EALT--ISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAE 606
L ++T+PDI+ILPSD++YF+K + + V +NPG+ KG GTFA+
Sbjct: 494 LKLGEFLNTMPDILILPSDLRYFVKNV-----------ENVVSLNPGKATKGINLGTFAK 542
Query: 607 I 607
+
Sbjct: 543 L 543
>gi|193787682|dbj|BAG52888.1| unnamed protein product [Homo sapiens]
Length = 295
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 167/310 (53%), Gaps = 41/310 (13%)
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA 361
+EG N +G L+A+KL + +PLP + +Q++ +++A
Sbjct: 1 MEGINTTGRKLVATKLYEGVPLPFYQPTEEDADFEQSM-----------------VLVAC 43
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEI 421
GP+TT+D++ ++PL +LI+ +P + IL GPF+D++H Q++ S F++IF +
Sbjct: 44 GPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFK-QC 102
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF---DIQPPDIIHQITSLTNPGTF 478
LR + + GS + + VPS+RD +H+ V PQPPF D+ D Q+ ++ P +
Sbjct: 103 LRTIIEGTRSSGSHL--VFVPSLRDVHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPCSL 159
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE 538
N + G + D+L L EE+S S GTS+ I ++ +YPLYPP E
Sbjct: 160 SINGVIFGLTSTDLLFHLGAEEIS--SSSGTSDRFSRILKHILTQRS----YYPLYPPQE 213
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
+ +D+ + PD++I+PS+++YF+K + LG CVCVNPGRL KG
Sbjct: 214 DMAIDYESFYVYAQLPVTPDVLIIPSELRYFVKDV-LG----------CVCVNPGRLTKG 262
Query: 599 EGSGTFAEIY 608
+ GTFA +Y
Sbjct: 263 QVGGTFARLY 272
>gi|380796161|gb|AFE69956.1| DNA polymerase alpha subunit B, partial [Macaca mulatta]
Length = 297
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 168/312 (53%), Gaps = 41/312 (13%)
Query: 300 VGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMII 359
V +EG N +G L+A+KL + +PLP + +Q++ +++
Sbjct: 1 VIMEGINTTGRKLVATKLYEGVPLPFYQPTEEDGDFEQSM-----------------VLV 43
Query: 360 AAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHL 419
A GP+TT+D++ ++PL +LI+ +P + IL GPF+D++H Q++ S F++IF
Sbjct: 44 ACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFK- 102
Query: 420 EILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF---DIQPPDIIHQITSLTNPG 476
+ LR + + GS + + VPS+RD +H+ V PQPPF D+ D Q+ ++ P
Sbjct: 103 QCLRTIIEGTRSSGSHL--VFVPSLRDVHHEPVYPQPPFSYSDLSRED-KKQVQFVSEPC 159
Query: 477 TFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP 536
+ N + G + D+L L EE+S S GTS+ I ++ +YPLYPP
Sbjct: 160 SLSINGVIFGLTSTDLLFHLGAEEIS--SSSGTSDRFSRILKHILTQRS----YYPLYPP 213
Query: 537 AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLA 596
E + +D+ + PD++I+PS+++YF+K + LG CVCVNPGRL
Sbjct: 214 QEDMAIDYETFYVYAQLPVTPDVLIIPSELRYFVKDV-LG----------CVCVNPGRLT 262
Query: 597 KGEGSGTFAEIY 608
KG+ GTFA +Y
Sbjct: 263 KGQVGGTFARLY 274
>gi|405123604|gb|AFR98368.1| alpha DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 687
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 214/432 (49%), Gaps = 46/432 (10%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
R+M+++ +R AL++ I ++A+A+ + E DP S +++ VG + + +
Sbjct: 241 RYMFEKLSERSEALDDSIDEYADAIKDAYGISELGDPHFVSDESIYTVGRVLSNTTSSKS 300
Query: 265 DKSVL-----LQSSVEHSGGQRVRLDLHK-----------LGEFSLFPGQVVGIEGSNPS 308
DK+ L LQSS G+R+ L+L + + FSL+ G +V ++G N
Sbjct: 301 DKAALKNSFHLQSSRLIGAGKRIALELPEERLKVRGGAPGVKGFSLYSGCLVCVKGRNGG 360
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G + V+++ L +++ P+ + +D + + + E +S+++AAGP+T +
Sbjct: 361 GSKFV----VEEVLLLPPSLLPQTPA-SELMDFQYGDKL---KGEPLSLMVAAGPYTLNE 412
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
NL+FEP + L+ +P +LILLGPF+DS+HP IK + EIF +I RLQ
Sbjct: 413 NLFFEPFETLVDKVLEDRPDVLILLGPFIDSQHPIIKSCAVTETPQEIFRKQISSRLQKV 472
Query: 429 VEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGC 487
V S V IL+PS+RD +H PQ + + + ++ +L NP TF N++ +
Sbjct: 473 VTQSPSTV-IILIPSVRDVVSHHMAFPQSMLEKEYLALPKKVKALPNPCTFSVNEVTISL 531
Query: 488 CTVDVLKQLSGEEMSRCSKDGTSNDRM------EIYSLDISLMGPAFFFYPLYPPAEGIP 541
+VD+L L +++ ++ M + + I + FYP++PP E +
Sbjct: 532 SSVDILFHLGQAHAPIRAQEADADPNMSGSPAPDPLANHIRQVLGQRSFYPIFPPQEDVA 591
Query: 542 LDFSL---AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
+ +L L + PDI+ILPS + F K++ + +NP +A+
Sbjct: 592 GEVNLDVTHYPLLKMDQAPDILILPSRLNKFAKIVD-----------STLVINPSHIARA 640
Query: 599 EGSGTFAEIYYH 610
+G +A+I H
Sbjct: 641 RATGHYAKIIVH 652
>gi|58261876|ref|XP_568348.1| alpha DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118395|ref|XP_772211.1| hypothetical protein CNBM1300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254819|gb|EAL17564.1| hypothetical protein CNBM1300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230521|gb|AAW46831.1| alpha DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 737
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 53/444 (11%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
R+M+++ +R AL++ I ++A+A+ + E DP S +++ VG + + +
Sbjct: 274 RYMFEKLSERSEALDDSIDEYADAIKDAYGLSELGDPHFVSDESIYTVGRVLSNTTSSKS 333
Query: 265 DKSVL-----LQSSVEHSGGQRVRLDLHK-----------LGEFSLFPGQVVGIEGSNPS 308
DK+ L LQSS G+R+ L+L + + FSL+ G +V ++G N
Sbjct: 334 DKTALKNSFHLQSSRLIGAGKRIALELPEEKLKVRGGAPGVKGFSLYSGCLVCVKGRNGG 393
Query: 309 GHCLIASK--LVDQIPL----PVDAVVDVHPSMKQALDQEIHSTVV------ISRPEEIS 356
G + + LV L + V + PS+ L Q S ++ + E +S
Sbjct: 394 GSKFVVEEVLLVRAFRLLELNHLTCSVQLPPSL---LPQTPASELIDFQYGDKLKGEPLS 450
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEI 416
+++AAGP+T +NL FEP + L+ +P +LILLGPFVDS+HP IK + EI
Sbjct: 451 LMVAAGPYTLNENLLFEPFETLVDKVLEDRPDVLILLGPFVDSQHPIIKSCAVTETPQEI 510
Query: 417 FHLEILRRLQDYVEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPDIIHQITSLTNP 475
F +I RLQ V S V IL+PS+RD +H PQ + + + ++ +L NP
Sbjct: 511 FRKQISSRLQKVVTQSPSTV-IILIPSVRDVVSHHMAFPQSMLEKEYLGLPKKVKALPNP 569
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM------EIYSLDISLMGPAFF 529
TF N++ + +VD+L L +++ ++ M + + I +
Sbjct: 570 CTFSVNEVTISLSSVDILFHLGQAHAPIRAQEADADPGMSGSPAPDPLANHIRQVLGQRS 629
Query: 530 FYPLYPPAEGIPLDFSL---AQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKK 586
FYPL+PP E + + +L L + PDI+ILPS + F+K++
Sbjct: 630 FYPLFPPQEDVAGEVNLDVTHYPLLKMDQAPDILILPSRLNKFVKIVD-----------S 678
Query: 587 CVCVNPGRLAKGEGSGTFAEIYYH 610
+ +NP +A+ +G +A++ H
Sbjct: 679 TLVINPSHIARARATGHYAKVIIH 702
>gi|328769006|gb|EGF79051.1| hypothetical protein BATDEDRAFT_12741 [Batrachochytrium
dendrobatidis JAM81]
Length = 501
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 217/466 (46%), Gaps = 67/466 (14%)
Query: 190 KCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTD----PTVAS 245
+C L + G R+MY++ ++ L+ +I A + + ++P D P
Sbjct: 25 QCELSLVPGQQTDGYRYMYEKLTEKGELLDAQIEYFAKIIANQYQQDDPMDLICNPAQPR 84
Query: 246 QRTLFAVGMICCDG--DG-HLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFS----LFPGQ 298
VG IC D DG LN SV+L+ S + G R+++DL K+ + S LFPGQ
Sbjct: 85 NEPGLVVGRICSDSFQDGVALNAHSVMLECSRNNGSGLRIKVDLSKILDSSQPCTLFPGQ 144
Query: 299 VVGIEGSNPSGHCLIASKLVDQI--PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
+VG +NPSG L S ++ P P + ++ SM +A + T I
Sbjct: 145 IVGFVATNPSGQQLHVSYIIYPTLPPRPTTNLSEIK-SMYRAENGLNKRT--------IH 195
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDE 415
+++A+GPFT D+L +EPL+ L+ ++ P ++IL+GPFVD +HP I G D+
Sbjct: 196 IVVASGPFTLVDSLTYEPLEALVVDVIEKDAPDVVILMGPFVDIDHPLIVSGNVMEDVDD 255
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITS--- 471
IF ++ +R+ D + ++ ILVPSIRDA ++V PQPP I Q+
Sbjct: 256 IFREQVAKRI-DRMRDARPGLQVILVPSIRDACTEWVAFPQPPLASGITTEIAQLRKKNL 314
Query: 472 ------------LTNPGTFEANQIKVGCCTVDVLKQLS-GEEMSRC---------SKDGT 509
NP F N+I T D++ L+ + M R D +
Sbjct: 315 GLTTDSQRGLYLFPNPVQFRLNEIVFAVSTSDIVFDLAESQYMCRSGPKTHLKSFGNDSS 374
Query: 510 SNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEA-----LTISTIPDIIILPS 564
+ ++ S + + FYP++P + LD S Q+ L + IPDI+I+ S
Sbjct: 375 AGHVLDRLSTCFNHVLRHRSFYPMFPSSSNACLD-STHQDGEYAGPLILQVIPDILIVSS 433
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
++Y RN + C+C+NPG + KG GT+A + H
Sbjct: 434 RLQYM-------ARNV----QDCLCINPGMMTKGRNGGTYARLCIH 468
>gi|194745768|ref|XP_001955359.1| GF16278 [Drosophila ananassae]
gi|190628396|gb|EDV43920.1| GF16278 [Drosophila ananassae]
Length = 601
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 163/656 (24%), Positives = 282/656 (42%), Gaps = 128/656 (19%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
M+ EIK +F + G D V+++C+ I YN+ ++ V W + L+ E
Sbjct: 1 MDAEIKQQFDEMGVEPADA--VVERCVDLAITYNVSDATEFVEQWMAFSLSHLHGEDPTT 58
Query: 60 DD--EMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILND---EDENIAEDILG---- 110
D+ E + +L L+ ++ + + + Y++ + + + ED+ + ED +G
Sbjct: 59 DNLGEFERKVLQLRKDKIASKTAAQ-KVKSYAAPETNSLATYGLIEDDPMMEDYMGDSVA 117
Query: 111 --------------TPPDNLK---LYSDA--LDSTYKANANGYSSD----KPSKLVTPFG 147
T P LK L+S A + K N G + KP +V FG
Sbjct: 118 DSSAMHTPKSKKEATRPAGLKGGVLFSPASFTPQSAKKNQTGTPGNAVKGKPGDIVDSFG 177
Query: 148 RRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFM 207
P +G D +++++ K L V G +M
Sbjct: 178 H--------------PKLLSGSNWQSDMEHTLPVVQKL-LHKDAPLTVANLG------YM 216
Query: 208 YDRTEDRFNALENRIRKHANALVSSGLYEE--------PTDP-TVASQRTLFAVGMICCD 258
D +R + L +R+ AL+ L + P D T+ + L AVGMI +
Sbjct: 217 NDLLSERCDDLHDRLVDTGRALIDRKLGPDGAAECSWYPQDKHTLEALHLLHAVGMIHSE 276
Query: 259 GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
DG L+ S L S + + L+ ++ S+FPGQVV +G P G+ +
Sbjct: 277 DDGPLDPHSAFLAVS-DIDNNSFLSLNFSRIKSCSIFPGQVVLAKGFIPKGNSFVV---- 331
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP------EEISMIIAAGPFTTTDNLYF 372
+EIH+ ++ P E+ ++AAGPFT + +L +
Sbjct: 332 ----------------------EEIHTERKLTPPNPLKVDRELQFVVAAGPFTDSTDLCY 369
Query: 373 EPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYM 432
EPL +L++Y K +P +L+L GPF+D++H + G +FD F + + ++ +
Sbjct: 370 EPLHDLLNYLKDHRPDVLVLTGPFLDADHKTV--GELAETFDSFFE----KMIAGIMDVV 423
Query: 433 GSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDV 492
G ++V S +DA V P PP ++ + L +P + + I +G + DV
Sbjct: 424 GPHTTVLMVSSQKDAMAHSVYPTPPPTLR--KSYPNLHMLPDPSIVDLDGITLGVTSTDV 481
Query: 493 LKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEAL 551
+ L E++ + +RM + G FYP+YPPA E +P D LA +
Sbjct: 482 VDHLLSHELA-----ANAGERMHRAINHLFHQGS---FYPIYPPADEDMPYDSQLALKYA 533
Query: 552 TISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
I +P+++ILP D ++FI+++S C+ +NPGR++ +G GTFA
Sbjct: 534 QIRQLPNVLILPGDQRHFIRLVS-----------DCLVINPGRVSDSKG-GTFARF 577
>gi|332249812|ref|XP_003274050.1| PREDICTED: DNA polymerase alpha subunit B [Nomascus leucogenys]
Length = 582
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 57/326 (17%)
Query: 293 SLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP 352
SLFPGQVV +EG N +G L+A+KL + +PLP + +Q++
Sbjct: 281 SLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYQPTEEDADFEQSM------------- 327
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSS 412
+++A GP+TT+D++ ++PL +LI+ +P + IL GPF+D++H Q++ G
Sbjct: 328 ----VLVACGPYTTSDSITYDPLLDLIAVVNHDRPDVCILFGPFLDAKHEQVEDG----- 378
Query: 413 FDEIFHLEILR-------RLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF---DIQP 462
F++ ++ L E S + VPS+RD +H+ V PQPPF D+
Sbjct: 379 FEKCLMTYAVKSCETPNISLLPEFERSCSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSR 438
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDIS 522
D Q+ ++ P + N + G + D+L L EE+S Y
Sbjct: 439 ED-KKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEISXXXXXXXXXLTQRSY----- 492
Query: 523 LMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGE 582
YPLYPP E + +D+ + PD++I+PS+++YF+K + LG
Sbjct: 493 --------YPLYPPQEDMAIDYETFYVYAQLPVTPDVLIIPSELRYFVKDV-LG------ 537
Query: 583 EQKKCVCVNPGRLAKGEGSGTFAEIY 608
CVCVNPGRL KG+ GTFA +Y
Sbjct: 538 ----CVCVNPGRLTKGQVGGTFARLY 559
>gi|296420101|ref|XP_002839619.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635802|emb|CAZ83810.1| unnamed protein product [Tuber melanosporum]
Length = 652
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 193/396 (48%), Gaps = 65/396 (16%)
Query: 240 DPTVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+P+ AS + AVG I CD DG L+ SVLL++S + G RVRL L + +S FPGQ
Sbjct: 264 NPSTASPSEIIAVGRISCDTLDGKLSPSSVLLEASRKMGAGSRVRLKLDAVLSYSFFPGQ 323
Query: 299 VVGIEGSNPSGHCLIASKLVD--QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
+ + G N SG L +++D ++P P + P++ + + ++
Sbjct: 324 IAAVRGVNASGEYLAVREILDIPRLPPPTSS-----PNVLLETANRLSAG-------GLN 371
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD------ 410
+++A+GP+TT DNL+FE L E+ + A P +LIL GPF+D++HP I+ G D
Sbjct: 372 IVVASGPYTTDDNLHFEALSEICNKAAESCPDVLILTGPFIDADHPLIRTGDFDFEIPDR 431
Query: 411 -----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPD 464
S +++F I +++ M +LVPS+RD + PQ F + +
Sbjct: 432 EYGDGGSMEDLFRERISPKIRLVQRSM-----VLLVPSVRDVVSGHISFPQEQFKRRQLE 486
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRME---IYSLDI 521
+ + + L NP TF N+I T D+L ++ +E+SR +D R IY ++
Sbjct: 487 LPN-VRCLPNPATFSINEIVFSVSTNDILFHMTSQEISRNPQDTNPTARFSKALIYQRNL 545
Query: 522 SLMGPAFFFYPLYP---------PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
YPL+P A G LD + A +S PD+++LPS + KV
Sbjct: 546 ---------YPLFPGPSKEQLPRGATGPNLDVPNLRLADLVSLAPDVLVLPSMLASSAKV 596
Query: 573 LSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
+ + +NPG L+K G G++AE++
Sbjct: 597 VD-----------GVLVLNPGFLSKRMGPGSYAEMH 621
>gi|195394642|ref|XP_002055951.1| GJ10668 [Drosophila virilis]
gi|194142660|gb|EDW59063.1| GJ10668 [Drosophila virilis]
Length = 600
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 163/664 (24%), Positives = 286/664 (43%), Gaps = 108/664 (16%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQL--DEST 57
M+ E+K +F + G D VL+KC+ + Y++ ++ V W + L+ D +
Sbjct: 1 MDSELKHQFDEMGVEPSDA--VLEKCIELALTYSIHDATEFVEQWMAFSLSHLNGDDPTP 58
Query: 58 VKDDEMDGFMLHLQNEQKEAI-----IKEEPS-LHIYSSKDVDMILNDEDENIAEDILG- 110
E + +L ++ E+ K +PS L S +I ED+ + +D +G
Sbjct: 59 ANLGEFERKVLQVKREKVGTTKLTHHTKSQPSALETSSLATYGLI---EDDPMMDDYVGD 115
Query: 111 ---TPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVK---------FN 158
T P K ++ ++ + +S P+ +RT +
Sbjct: 116 STSTQPHTPKARNERARTSIMKSGMVFS---PASYTPQSAKRTPAATTSTITGKPGDIVD 172
Query: 159 INNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGP--EPGCRFMYDRTEDRFN 216
P GC ++++ ++H P R+M D DR +
Sbjct: 173 TFGHPKLLAGCTWQSQVEQPLPVVQK---------LLHNDVPLTVANLRYMNDLLYDRCD 223
Query: 217 ALENRIRKHANALVSSGLYEE--------PTDP-TVASQRTLFAVGMICCDGDGHLNDKS 267
L +R+ ALV L + P D T+ + L AVGMI D DG L+ S
Sbjct: 224 DLHDRLVDIGQALVDKKLGAKGAAECSWYPQDRHTLDALHVLHAVGMIHSDDDGPLDAHS 283
Query: 268 VLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDA 327
LL +V ++ + + L+ ++ S+FPGQVV +G P G + ++ D
Sbjct: 284 ALL--AVLNTDEKCLALNFSQIKSASIFPGQVVLAKGFIPRGDTFVVEEIY------TDR 335
Query: 328 VVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQP 387
+ + P +K + R ++ ++AAGP+T + +L++EPL EL+ Y K +P
Sbjct: 336 KLTLPPPLK------------VDR--DVQFVVAAGPYTHSTDLFYEPLHELLKYLKEHRP 381
Query: 388 QLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA 447
+L+L GPFVD+EH + G +FD F + + ++ +GS +LV +DA
Sbjct: 382 DVLLLTGPFVDAEHKLV--GDLAETFDSFFE----KMISGIMDVVGSSTTVLLVSCQKDA 435
Query: 448 NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKD 507
V P P ++ + L +P + + + +G + DVL L E +
Sbjct: 436 MAPAVYPTPSLALR--KTYPNLHMLPDPSLVDLDGVTLGVTSTDVLDHLLSHEFA----- 488
Query: 508 GTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPDIIILPSDM 566
+ +RM I+ + FYP+ PPA E + D LAQ+ + +P+++ILPSD
Sbjct: 489 ANAGERMH---RAINHLFNQGSFYPICPPADENMSYDSQLAQKYAQLKQLPNVLILPSDQ 545
Query: 567 KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYY-------HGSPEMMNAS 619
++FI++++ C+ +NPGRL+ +G GTFA P M N+
Sbjct: 546 RHFIRLVN-----------DCLVINPGRLSDNKG-GTFARFLVTPTAPTASSKPNMFNSV 593
Query: 620 IISI 623
+ +
Sbjct: 594 VCQV 597
>gi|195054929|ref|XP_001994375.1| GH16851 [Drosophila grimshawi]
gi|193892138|gb|EDV91004.1| GH16851 [Drosophila grimshawi]
Length = 603
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 163/639 (25%), Positives = 280/639 (43%), Gaps = 95/639 (14%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNR-QLDESTV 58
M+ E+K +F + G VL KC+ ++Y++ ++ V W + L+ D+ T
Sbjct: 1 MDTELKQQFDEMGVE--PSVAVLDKCVELSLSYSIHDATEFVEQWMAFSLSHLHGDDPTP 58
Query: 59 KD-DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDM---------ILNDE---DENIA 105
++ E + +L ++ E+ A K+ H S+ M +L DE D+ ++
Sbjct: 59 ENLGEFERKVLQVRREKGGA--KKSTQQHNIKSQTAAMETSSLASYGLLEDEPMMDDYVS 116
Query: 106 EDILGTP----PDNLKLYSDALDSTYKANANGYSSDKPSKL-VTPFGRRTEKLVVKFNIN 160
E P N S AL S + Y+ + TP K +
Sbjct: 117 ESAATQPHTPKAHNQHPRSSALKSGVLFSPASYTHQSAKRTPATPIATSMGKPGDIVDTF 176
Query: 161 NLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGP--EPGCRFMYDRTEDRFNAL 218
P C H ++++ ++H P R+M D +R + L
Sbjct: 177 GHPRLLAACTWHSQLEQSLPVVQK---------LLHNDAPLTMSNLRYMNDLLYERCDDL 227
Query: 219 ENRIRKHANALVSSGLYEE--------PTDP-TVASQRTLFAVGMICCDGDGHLNDKSVL 269
+R+ ALV L + P D T+ + L AVGMI D DG L+ S L
Sbjct: 228 HDRLVDIGQALVDKKLGAKGAAECSWYPQDRHTLDALHVLHAVGMIHSDDDGPLDAHSAL 287
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
L +V ++ + + L+ ++ S+FPGQVV +G P G + ++ D +
Sbjct: 288 L--AVLNTDEKFLSLNFSQIKSASIFPGQVVLAKGFIPRGDTFVVEEIY------TDRKL 339
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
+ P +K LD+++ ++AAGP+T +L+++PL +L+ Y K +P +
Sbjct: 340 TLPPPLK--LDRDVQ------------FVVAAGPYTHITDLFYDPLHDLLKYLKEHRPDV 385
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANH 449
L+L GPFVD+EH + G +FD F + + +E +GS ++V +DA
Sbjct: 386 LLLTGPFVDAEHKLV--GELAETFDSFFE----KMVTGIMEVVGSSTTVLMVSCQKDAMT 439
Query: 450 DFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGT 509
V P P ++ + L +P + + + +G + DVL L E +
Sbjct: 440 PAVYPTPSLPLR--KTYPNLHMLPDPSLVDLDGLTLGVSSTDVLDHLLSYEFAT-----N 492
Query: 510 SNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPDIIILPSDMKY 568
+ +RM I+ + FYPL PPA E + D LAQ+ + +P+I+ILPSD ++
Sbjct: 493 AGERMH---RAINHLFNQGSFYPLCPPADENMSYDSQLAQKYAQLKQLPNILILPSDQRH 549
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
FI++++ C+ +NPGRL+ +G GTFA
Sbjct: 550 FIRLVN-----------DCLVINPGRLSDNKG-GTFARF 576
>gi|389641335|ref|XP_003718300.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
gi|351640853|gb|EHA48716.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
Length = 666
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 170/665 (25%), Positives = 276/665 (41%), Gaps = 91/665 (13%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
EE+ F G E +V+ + + + L P DL WE Y + +DE K D
Sbjct: 7 EELNERFAPGGKPL--EVDVMGELQSIMRLHLLSPQDLFFKWESYCIKMDMDEMRPKYDT 64
Query: 63 MDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDA 122
+ GF LQ+ + + H+ + K + + D+ G L +
Sbjct: 65 IRGFKQDLQDALERN--NRSQAAHVKTEKRMGATPRAGGKGAGGDVFGM----LDGLVPS 118
Query: 123 LDSTYKANANGYS--------------SDKPSKLVTPFGRRTEKLVV----KFNINNLPN 164
T K N +G + S+ P+ + R+ + L FN P
Sbjct: 119 TPGTSKLNKSGSARRKNMETPSMSRVKSEHPASSPSTLERQLDSLGALTPSSFNDRANPG 178
Query: 165 TENGCIEHDDENTEDDII----KRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALEN 220
+ + E I RIK L + G R M + + L++
Sbjct: 179 EIIEVLNNQLPAAEPPIAPFSESRIKLTAASDLK------KLGYRPMAMKLSEASEILDD 232
Query: 221 RIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHS 277
RI + N ++ +E + A+Q T + VG I D +G LN S++L++S
Sbjct: 233 RIEEFTNFVMQHHNLDESAFGSAANQSTSEIICVGRIASDTSEGRLNAASLVLETSRRSG 292
Query: 278 GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAV-----VDVH 332
GG R L+L KL + FPGQ+V + G+N SGH S+++ QIPL +A ++ H
Sbjct: 293 GGLRAPLNLQKLPGYQFFPGQIVALRGTNASGHEFNVSEVL-QIPLLPNAASTPEALEAH 351
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
+Q L + S P ++++ A+GP++ DNL FEPL + + A L+L
Sbjct: 352 ---RQRLQGGPDAMDSDSDPMPLNVMFASGPYSADDNLDFEPLHTICNQAADTYADALVL 408
Query: 393 LGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILV 441
GPF+D +HP I G D ++ +F I L + + +V +L+
Sbjct: 409 TGPFIDIDHPLIAAGDFDLPEDANIDPDQATMATLFKYMISPAL-NQLAASNPQVTILLI 467
Query: 442 PSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE 500
PS+RDA V PQ F + + + NP TF N+ VG + DVL QL G
Sbjct: 468 PSVRDAIDKHVSWPQDAFPRKDLGLPKAAKIVGNPMTFSINETLVGISSQDVLYQLQGGV 527
Query: 501 MSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEGIPLDFS 545
++ G + D M+ S + ++PL+PP A G LD S
Sbjct: 528 LA----GGKAPDGMDRLSRLARNVIEQRHYFPLFPPMDRSKLPKTGTAEELALGSVLDVS 583
Query: 546 LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA 605
+ ++ PD+++LPS M F +V+ + + +N G L+K G GT+A
Sbjct: 584 YLKLGEMVNVRPDVLVLPSAMPPFARVV-----------ESVLIINSGYLSKRRGPGTYA 632
Query: 606 EIYYH 610
+ +
Sbjct: 633 RMTLY 637
>gi|440466804|gb|ELQ36048.1| DNA polymerase subunit alpha B [Magnaporthe oryzae Y34]
gi|440480288|gb|ELQ60962.1| DNA polymerase subunit alpha B [Magnaporthe oryzae P131]
Length = 666
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 170/665 (25%), Positives = 276/665 (41%), Gaps = 91/665 (13%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
EE+ F G E +V+ + + + L P DL WE Y + +DE K D
Sbjct: 7 EELNERFAPGGKPL--EVDVMGELQSIMRLHLLSPQDLFFKWESYCIKMDMDEMRPKYDT 64
Query: 63 MDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDA 122
+ GF LQ+ + + H+ + K + + D+ G L +
Sbjct: 65 IRGFKQDLQDALERN--NRSQAAHVKTEKRMGATPRAGGKGAGGDVFGM----LDGLVPS 118
Query: 123 LDSTYKANANGYS--------------SDKPSKLVTPFGRRTEKLVV----KFNINNLPN 164
T K N +G + S+ P+ + R+ + L FN P
Sbjct: 119 TPGTSKLNKSGSARRKNMETPSMSRVKSEHPASSPSTLERQLDSLGALTPSSFNDRANPG 178
Query: 165 TENGCIEHDDENTEDDII----KRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALEN 220
+ + E I RIK L + G R M + + L++
Sbjct: 179 EIIEVLNNQLPAAEPPIALFSESRIKLTAASDLK------KLGYRPMAMKLSEASEILDD 232
Query: 221 RIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHS 277
RI + N ++ +E + A+Q T + VG I D +G LN S++L++S
Sbjct: 233 RIEEFTNFVMQHHNLDESAFGSAANQSTSEIICVGRIASDTSEGRLNAASLVLETSRRSG 292
Query: 278 GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAV-----VDVH 332
GG R L+L KL + FPGQ+V + G+N SGH S+++ QIPL +A ++ H
Sbjct: 293 GGLRAPLNLQKLPGYQFFPGQIVALRGTNASGHEFNVSEVL-QIPLLPNAASTPEALEAH 351
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
+Q L + S P ++++ A+GP++ DNL FEPL + + A L+L
Sbjct: 352 ---RQRLQGGPDAMDSDSDPMPLNVMFASGPYSADDNLDFEPLHTICNQAADTYADALVL 408
Query: 393 LGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILV 441
GPF+D +HP I G D ++ +F I L + + +V +L+
Sbjct: 409 TGPFIDIDHPLIAAGDFDLPEDANIDPDQATMATLFKYMISPAL-NQLAASNPQVTILLI 467
Query: 442 PSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE 500
PS+RDA V PQ F + + + NP TF N+ VG + DVL QL G
Sbjct: 468 PSVRDAIDKHVSWPQDAFPRKDLGLPKAAKIVGNPMTFSINETLVGISSQDVLYQLQGGV 527
Query: 501 MSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEGIPLDFS 545
++ G + D M+ S + ++PL+PP A G LD S
Sbjct: 528 LA----GGKAPDGMDRLSRLARNVIEQRHYFPLFPPMDRSKLPKTGTAEELALGSVLDVS 583
Query: 546 LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA 605
+ ++ PD+++LPS M F +V+ + + +N G L+K G GT+A
Sbjct: 584 YLKLGEMVNVRPDVLVLPSAMPPFARVV-----------ESVLIINSGYLSKRRGPGTYA 632
Query: 606 EIYYH 610
+ +
Sbjct: 633 RMTLY 637
>gi|440635697|gb|ELR05616.1| hypothetical protein GMDG_01806 [Geomyces destructans 20631-21]
Length = 669
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 167/656 (25%), Positives = 279/656 (42%), Gaps = 77/656 (11%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYL-----NRQLDEST 57
EE+ A F N E +V+ + + +++ P +L WE Y + + +LD T
Sbjct: 7 EELSALFATTLVNKKLEADVIAELQSIMRLHSIPPQELFYKWESYSMKIGTDDMKLDIET 66
Query: 58 V---KDDEMDGFMLHLQNEQKEAIIKEEPSL--HIYSSKDVDMILNDEDENIAEDILGTP 112
V K D DG +N+ + + + +I S+ DV +L+ N G+
Sbjct: 67 VRALKKDIQDGLERESRNKSNVRSVDKRVATPRNISSTGDVFNMLDGLVPNTPRTAPGSA 126
Query: 113 PDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKL---VVKFNINNLPNTENGC 169
+ K + + + + P + TP+ ++ V FN + PN
Sbjct: 127 ANGSKRKINQYQTPSISRVKQEPASSPPEFKTPYKPGEKEYGGPTVAFN--DRPNAGQTV 184
Query: 170 IEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANAL 229
+ + + + L+ + + + M ++ + L++RI + +
Sbjct: 185 EILNSQLPAPSPPIAPFSSPRIKLIANSDLKKLSYKPMAMKSSESSEILDDRIDELMALI 244
Query: 230 VSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDL 286
+ + + AS+ + A+G I D DG LN S++L++S G RV L L
Sbjct: 245 KTHHTLPDSAFGSAASKSVDEIVAIGRIASDSADGKLNTASLVLETSRRMGNGLRVPLRL 304
Query: 287 HKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIH-- 344
+ F FPGQ+V + G N SG S++++ LPV A S Q L+ I
Sbjct: 305 GAVASFQFFPGQIVALRGINASGEEFTVSEVLEIPLLPVAA------STPQGLETHIQRL 358
Query: 345 -----STVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDS 399
+ S ++++I AGP+TT DNL FEPL L S A LIL+GPF+D+
Sbjct: 359 RGGPDAMDDDSAAAPLNILIGAGPYTTDDNLDFEPLHALCSQAADTYADALILVGPFLDT 418
Query: 400 EHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDAN 448
EHP + G D ++ +F I R LQ S + +L+PS+RDA
Sbjct: 419 EHPLLASGDFDLPPEANSDPDTTTLKTVFEHLISRPLQSLAAANPS-ITILLIPSVRDAI 477
Query: 449 HDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS-RCSK 506
V PQ PF + + + NP T N+I G + D+L +L EE++ +
Sbjct: 478 SAHVSWPQEPFSRKDLGLPKLAKVVGNPMTVSINEIVTGISSQDILSELRHEEVTGGVPQ 537
Query: 507 DGTSNDRMEIYSLDISLMGPAFFFYPLYPP-----------AEGIP----LDFSLAQEAL 551
G R+ Y ++ F+PLYPP EG P LD S +
Sbjct: 538 AGGILARLPKYIIE------QRHFFPLYPPVDRKLLLRTGTVEGSPPGAMLDVSYVKLGE 591
Query: 552 TISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++ PD++I+PS + F KV+ + + VNPG +A+ + +GT+A +
Sbjct: 592 MLNVRPDLLIVPSALPPFAKVV-----------ESVLVVNPGVVARRKATGTYARV 636
>gi|195503826|ref|XP_002098816.1| GE23725 [Drosophila yakuba]
gi|194184917|gb|EDW98528.1| GE23725 [Drosophila yakuba]
Length = 609
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 171/664 (25%), Positives = 280/664 (42%), Gaps = 136/664 (20%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
MEEE+K +F + G D VL +C I YN+ ++ V W + L+ E
Sbjct: 1 MEEELKQQFDEMGVEPADP--VLGRCAELAITYNIHDATEFVEQWMAFSLSHLHGEDPAI 58
Query: 60 DD--EMDGFMLHLQNEQK-------------EAIIKEEPSLHIYSSKDVDMILND--EDE 102
++ + + +L L+ ++ + ++E SL Y + D +++D +
Sbjct: 59 ENLGDFERKVLQLRKDKAGSKATAQRAKSYAPSAVQETSSLATYGVMEDDPMIDDYVSES 118
Query: 103 NIAEDILGTP--------PDNLK---LYSDALDSTYKANAN---GYSSD----KPSKLVT 144
+ +L TP NLK L+S A + A G S+ KP +V
Sbjct: 119 AVDSSVLHTPKAKKDLGRSSNLKGGVLFSPASYTPQSAKRKAELGTPSNSVAGKPGDIVD 178
Query: 145 PFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPE--P 202
FG KL+ ++ +EH T+ ++H P
Sbjct: 179 TFGH--PKLLAG-------SSWQSQVEHTVPVTQK--------------LLHNDAPLTIA 215
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEE--------PTDPTV-ASQRTLFAVG 253
+M D DR + L R + ALV L + P D V S L AVG
Sbjct: 216 NLGYMNDLLADRCHNLRIRFNQTGPALVDKKLGQAGAAECIWYPQDRQVLQSAGGLHAVG 275
Query: 254 MICCDGDGHLNDKS---VLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
MI + DG L+ S V+L VE + L+ ++ S+FPGQVV +G P G
Sbjct: 276 MIHSEDDGPLDAYSAFMVVLDDDVEDEMDPTLTLNFSRVKSASIFPGQVVLAKGFIPRGK 335
Query: 311 CLIAS------KLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
+ KL PL +D E+ ++A+GPF
Sbjct: 336 TFMVEEIHTERKLTPANPLQID--------------------------RELQFVVASGPF 369
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR 424
T + +L++EPL +L+ Y K +P +L+L GPF+D++H + G +FD F +
Sbjct: 370 TDSTDLFYEPLHDLLKYIKDHRPDVLVLTGPFLDADHKMV--GELAETFDTFFE----KM 423
Query: 425 LQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIK 484
+ +E +GS ++V S +DA V P PP ++ + L +P + + I
Sbjct: 424 IAGIMEAIGSHTAVLVVTSQKDAMALSVYPTPPPTLR--RTYPNLYMLPDPSLVDLDGIT 481
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLD 543
+G + DV+ L E + + +RM + G FYPLYPPA E + D
Sbjct: 482 LGVTSTDVVDHLLSHEFAV-----NAGERMHRAINHLFHQGS---FYPLYPPADEDMAYD 533
Query: 544 FSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGT 603
LA + + +P+++ILPSD ++F+++++ C+ +NPGR+A +G GT
Sbjct: 534 SQLALKYAQLKQLPNVLILPSDQRHFVRLVN-----------DCLVINPGRVADKKG-GT 581
Query: 604 FAEI 607
FA
Sbjct: 582 FARF 585
>gi|16768544|gb|AAL28491.1| GM08365p [Drosophila melanogaster]
Length = 609
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 165/649 (25%), Positives = 266/649 (40%), Gaps = 106/649 (16%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
MEEE+K +F + G D VL +C I YN+ ++ V W + L+ E
Sbjct: 1 MEEELKQQFDEMGVEPADA--VLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAI 58
Query: 60 DDEMDGFMLHLQNEQKEA---------------IIKEEPSLHIYSSKDVDMILNDEDENI 104
++ D LQ + +A +++ SL Y + D +L+D
Sbjct: 59 ENLGDFERKVLQLRKDKAGYKATGQKAKSYGSPSVQDTSSLATYGVMEDDPMLDDYVSES 118
Query: 105 AEDILGTPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFN-INNLP 163
A D K SD AN G + P+ +R L N + P
Sbjct: 119 AVDSSALHTPKAKKQSD-----RTANLKGAALFSPASYTPQSAKRKAGLETPSNSVAGKP 173
Query: 164 NTENGCIEHDD----ENTEDDIIKRIKTGKKCSLMVHGSGPE--PGCRFMYDRTEDRFNA 217
H + + + + +K ++H P +M D DR +
Sbjct: 174 GDIVDTFGHPKLLAGSSWQSQMEHTVPVTQK---LLHNDAPLTIANLGYMNDLLTDRCHN 230
Query: 218 LENRIRKHANALVSSGLYEE--------PTDPTV-ASQRTLFAVGMICCDGDGHLNDKSV 268
L R + ALV L + P D V S L AVGMI + DG L+ S
Sbjct: 231 LRVRFNQTGPALVDKKLGQAGAAECIWYPQDRQVLQSAGGLHAVGMIHSEDDGPLDAHSA 290
Query: 269 ---LLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIAS------KLVD 319
+L VE + L+ ++ S+FPGQVV +G P G + KL
Sbjct: 291 FMAVLDDDVEDEMDPTLTLNFSRVKSASIFPGQVVLAKGFIPRGKTFMVEEIHTERKLTP 350
Query: 320 QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI 379
PL +D E+ ++A+GPFT + +L++EPL +L+
Sbjct: 351 ATPLQID--------------------------RELQFVVASGPFTDSTDLFYEPLHDLL 384
Query: 380 SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAI 439
Y K +P +L+L GPF+D++H + G +FD F + + +E +GS +
Sbjct: 385 KYLKDHRPDVLVLTGPFLDADHKMV--GELAETFDTFFE----KMIGGIMESIGSHTAVL 438
Query: 440 LVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGE 499
+V S +DA V P PP ++ + L +P + + + +G + DV+ L
Sbjct: 439 VVTSQKDAMALSVYPTPPPSLR--RTYPNLYMLPDPSLVDLDGLTLGVTSTDVVDHLLSH 496
Query: 500 EMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPD 558
E + + +RM + G FYPLYPPA E + D LA + + +P+
Sbjct: 497 EFAV-----NAGERMHRVINHLFHQGS---FYPLYPPADEDMAYDSQLALKYAQLKQLPN 548
Query: 559 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++ILPSD ++FI++++ C+ +NPGR+A +G GTFA
Sbjct: 549 VLILPSDQRHFIRLVN-----------DCLVINPGRVADKKG-GTFARF 585
>gi|452845614|gb|EME47547.1| hypothetical protein DOTSEDRAFT_59988 [Dothistroma septosporum
NZE10]
Length = 667
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 211/454 (46%), Gaps = 101/454 (22%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEP----TDPTVASQRTLFAVGMICCDG-DGHLNDK 266
+DR + R++K+ YE P +P S + AVG I CD +G LN
Sbjct: 224 DDRIDTFTERMQKY---------YELPDSAFGNPAAQSTAEIVAVGRIACDTPNGKLNAA 274
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
S++L++S G RV L + LG F FPG++V ++GSN SG A+++ +P+P+
Sbjct: 275 SLVLETSRRMGAGMRVPLKMESLG-FDFFPGKIVALKGSNVSGEFFAATEV---LPMPL- 329
Query: 327 AVVDVHPSMKQALDQEIHSTVVI-----SRPEEISMIIAAGPFTTTDNLYFEPLKELISY 381
+ P+ + D E+H+ + +RP +SM+I +GP+TT +L F PL L+
Sbjct: 330 ----LPPAASRTEDIEMHNDRLAGADGETRP--LSMLIGSGPYTTDLDLSFAPLYALLEK 383
Query: 382 AKRKQPQLLILLGPFVDSEHPQIKKGTTD-------------SSFDEIFHLEILRRLQDY 428
A+ + +L+L GPF+D EHP + G + ++ ++F + + LQ
Sbjct: 384 AESDRADVLVLTGPFLDIEHPVVASGDFEPYVPSDAKIQPDQATILDVFRMFVSEPLQKL 443
Query: 429 VEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
+ + + + ++VPS+RDA V +P+P + Q+ + NP N+
Sbjct: 444 AQAVPT-ITIVMVPSMRDAISKHVSWPQDRVPRPQLALP-----RQVQFVANPMALSINE 497
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSND----RMEIYSLDISLMGPAFFFYPLYPPAE 538
+ VG + DVL +L E + + SND R+ + L+ S F+P++PPA
Sbjct: 498 MLVGMSSQDVLSELRRENVYQAGNGQRSNDDLLGRLSNHILEQS------HFFPVFPPAA 551
Query: 539 -------------------------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVL 573
G +D + + PD++ILPS + F KV+
Sbjct: 552 REDLPRPTAIPYEIPPPGGEERVAMGANIDLTYYKLGEFWQVRPDLLILPSVLNPFAKVV 611
Query: 574 SLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+ +C+NPG L+K G+GT+A +
Sbjct: 612 N-----------GVMCINPGTLSKKRGAGTYALV 634
>gi|449301784|gb|EMC97793.1| hypothetical protein BAUCODRAFT_67553 [Baudoinia compniacensis UAMH
10762]
Length = 669
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 210/451 (46%), Gaps = 74/451 (16%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLL 270
+DR + + I+ H + L S +P S + VG I CD G LN S++L
Sbjct: 226 DDRIDTFTDLIQAH-HKLPDSAF----GNPAAQSTAEVVTVGRIACDDPSGKLNAASIVL 280
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD--QIPLPVD-- 326
+ S + G RV L + +FPG++V + G+N SG ++++ ++P P
Sbjct: 281 EGSRRMAAGLRVPLKFAAGVGYDVFPGKIVALRGTNVSGEYFSVAEVLSMPRLPPPASSP 340
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
A +D+H + D E +RP +SM++A+GP+TT + F PL L++ AK +
Sbjct: 341 ADIDIHNDRLTSADGE-------TRP--LSMLVASGPYTTDIDFSFAPLHALLATAKEQN 391
Query: 387 PQLLILLGPFVDSEHPQIKKGTTD-------------SSFDEIFHLEILRRLQDYVEYMG 433
+L+L GPF+D EHP + G + ++ +++F + I + +QD V +
Sbjct: 392 TDVLVLAGPFLDLEHPVVASGDFEDHLPADAKIEPDRATLNDLFRILIAQPIQDLVRAVP 451
Query: 434 SEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDV 492
+ + I+VPS+RDA N PQ F + Q+ +TNP N++ + T DV
Sbjct: 452 T-ITIIMVPSLRDAINKHTAWPQDRFPRAALGLPKQVHVVTNPIMLSINEMILAVSTQDV 510
Query: 493 LKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------- 536
L +L E + + K ND + + L +++ FF P++PP
Sbjct: 511 LSELRKENVYQAGKGQAFNDDL-LARLTGAVIDQQHFF-PVFPPQSRVDLPRPATIPGEV 568
Query: 537 ---------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKC 587
A G LD S + + PD+++LPS + F+KV+ EG
Sbjct: 569 PALGEEERMAVGACLDLSYLKLGEWLKVRPDVLVLPSVLNPFVKVV------EG-----V 617
Query: 588 VCVNPGRLAKGEGSGTFAEIYYHGSPEMMNA 618
C+NPG L+K G G FA + P +++A
Sbjct: 618 TCINPGTLSKKRGPGHFAAMTIQ--PRVISA 646
>gi|451851852|gb|EMD65150.1| hypothetical protein COCSADRAFT_141761 [Cochliobolus sativus
ND90Pr]
Length = 695
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 166/668 (24%), Positives = 281/668 (42%), Gaps = 110/668 (16%)
Query: 20 GEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNE-QKEAI 78
+VL + + C Y++ P +L W+ Y + +E+ + F +Q+ ++E+
Sbjct: 25 ADVLAELQSMCRLYSISPEELDFKWQAYNMKMGGEENKMDVKTAQDFKKTIQDALERESR 84
Query: 79 IKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANAN----GY 134
K + + + + +I E ++ P S ST K AN G
Sbjct: 85 GKAQQRNEVKRGQPTPRAKGGDMYDILEGLVPNTP-RPSAPSGVNGSTVKRKANFQTPGG 143
Query: 135 SSDKPSKLVTPFGRRTEK----------LVVKFNINNLPNTEN---GCIEHDDENTEDDI 181
++K ++ +P G T K + N N++ TE G I + +E+
Sbjct: 144 KANKAHEMSSPGGFMTPKAETSGGPVFDFASRTNANDI--TEQFMQGDIAIPEPPSEEPK 201
Query: 182 IKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPT-- 239
RIK L + + R M + + L++RI + + L S +E
Sbjct: 202 EPRIK------LKANTDMSKFSYRTMAMKLSEASEVLDDRIDEFRDILRESAGLDESAFG 255
Query: 240 DPTVASQRTLFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+P AS + AVG I CD +G LN S++L+ S H G+RV L++ L ++ FPGQ
Sbjct: 256 NPNYASPSEIIAVGRIACDTSEGKLNTASLVLEGSRRHGSGRRVPLNIEGLQSYNFFPGQ 315
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI--- 355
+V + G+N SG + S+++ LP+ P A++ T S P+ +
Sbjct: 316 IVALRGTNASGDSFVVSEVLS---LPLLNPPATKPDELDAINARYFDTP-DSDPDNVRPL 371
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD----- 410
+++IA+GP+TT NL F PL + A +IL+GPF+D+EHPQI+ G D
Sbjct: 372 TLMIASGPYTTEQNLDFAPLHAFLDKAAEAYADSIILIGPFLDAEHPQIRSGDFDAPPGV 431
Query: 411 ----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF-VLPQPPF---DIQP 462
++ ++F I +Q + + + + +LVPS+RDA+H PQ F ++
Sbjct: 432 SPDQATMTDLFRHHISSAIQSFNKRVPT-CNILLVPSLRDAHHHHAAFPQDKFIKKELSF 490
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDIS 522
+ +TNP T N++ VG ++D L L EE++ T+ IY
Sbjct: 491 GAAGKMVQCVTNPMTVSMNEMTVGMSSLDNLDMLRREELAGGKARATN-----IYERCAR 545
Query: 523 LMGPAFFFYPLYPPAE-------------------------------------------G 539
+ F PL+PP G
Sbjct: 546 NLIEQRSFLPLFPPTGREKQQFMPTPIEEKVMKNNTANGEGKEGEEADEEQAPSPFLPLG 605
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
LD S + ++ PDI+I PS ++ +KV+ + + VNPG LAK
Sbjct: 606 TMLDTSYLKLGEMLNVRPDILITPSVLQGTVKVV-----------ESVLIVNPGTLAKRR 654
Query: 600 GSGTFAEI 607
+GT+A +
Sbjct: 655 AAGTYARV 662
>gi|383863803|ref|XP_003707369.1| PREDICTED: DNA polymerase alpha subunit B-like [Megachile
rotundata]
Length = 593
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 51/370 (13%)
Query: 245 SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQR---VRLDLHKLGEFSLFPGQVVG 301
SQ G I D + K V+L+ G + +RLDL + +S+FPGQ++
Sbjct: 248 SQTPFRTWGKILTMFDKSVESKIVMLEGCKRCKGEKNAPVMRLDLSGIKYYSVFPGQILA 307
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA 361
+E N SG+ L+ +L + P+ +V P++ + ++ + +A
Sbjct: 308 VEAINTSGNTLVVKELFVKGHAPLASV----PNLLK----------------DLRIYVAV 347
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEI 421
GPFT ++NL ++PL +L+ ++P +LIL+GPF++ HP+IKK T ++ E F +I
Sbjct: 348 GPFTASNNLNYQPLWDLMERVSEEEPNVLILVGPFIEYTHPEIKKCTLKDTYQEFFD-KI 406
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI---IHQITSLTNPGTF 478
L R+ ++ G + +LVPS RD +HD V P P F + I + + S+ +P
Sbjct: 407 LARITQCLQ--GKDTHVVLVPSNRDVHHDPVYPTPEFILNTHRIGSNMANVYSMPDPCII 464
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE 538
+K+G +VDVL+ L E+S S DR + L ++ A FYPL+P
Sbjct: 465 SVEGLKIGITSVDVLRHLGQHEVSNMS----GMDR--VGRLADHVLSQA-TFYPLHPAPS 517
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
G+ D +L ++ P I+ILPSD+KY+ K + NE + +NP RL K
Sbjct: 518 GLNCDSTLLKKYACFKRQPHIMILPSDIKYYCKPI-----NES------LILNPERLQK- 565
Query: 599 EGSGTFAEIY 608
T+A++Y
Sbjct: 566 ---YTYAKLY 572
>gi|345489814|ref|XP_001601850.2| PREDICTED: DNA polymerase alpha subunit B-like [Nasonia
vitripennis]
Length = 605
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 155/645 (24%), Positives = 281/645 (43%), Gaps = 82/645 (12%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVY---YLNRQLDEST 57
++EE+ +FQ G + + + E+L+KC+ C YN+ +LV+ W + +L+ L+ +
Sbjct: 3 VKEELLEKFQITGCDNLSD-EILEKCIELCHWYNIDEEELVNMWVAFGVGHLDGNLEPTV 61
Query: 58 VKDDEMDGFMLHLQNEQKEAIIKEEPSLH-IYSSKDVDMILNDEDENIAEDILGTPPDNL 116
DEM N + + +P YS D DE+ + TP D L
Sbjct: 62 RALDEMKHVTPRNINRNPDTSNRTQPEQRDRYSIPSTSNAPMDVDESEIVGMYATP-DQL 120
Query: 117 KLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDE- 175
+ + +G S K + +P + E + NN +
Sbjct: 121 AVLQAPGPRSPDLEDSGPSGCKEEEARSP--QTGECTLPPLEPNNTTTATQLTSTQSGKI 178
Query: 176 -NTEDDIIKRIKTGKKCSLMVHGSGPE--PGCRFMYDRTEDRFNALENRIRKHANALVSS 232
+T I KK ++ +GP R+M++ + + + R + +++
Sbjct: 179 LSTFGTKISTWVNNKKMRYLIRRAGPHVPKDARYMFELLKSTSD-IRTRACRSIGQRINA 237
Query: 233 GLYEEPTDPTVAS-------QRTLFAVGMICCDGDGHLNDKSVLLQ--------SSVEHS 277
E+ D + + Q++ G +C D + ++ + +L+ ++V+
Sbjct: 238 VWAEQKKDDMLVTWNVRTKQQKSYRTWGRVCFDSENKQSNPTAMLEGCRKPPKSNNVDAK 297
Query: 278 GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQ 337
V LD+ L E LFPGQ+V +EG N + ++++ VH
Sbjct: 298 LWPLVELDVSDLRECCLFPGQIVAVEGLNLT-----------------ESLMKVHDIFTS 340
Query: 338 ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFV 397
+ ++ +E+ +I+AAGPFT +++L + PL EL+ +P LL+L+GPF+
Sbjct: 341 GFIPAANPPSLV---DELKIIVAAGPFTHSNDLDYRPLWELMDKVAEDEPHLLVLIGPFL 397
Query: 398 DSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPP 457
D HP + + E F ++ R++ Y+ G + +LV S RDA+H V P P
Sbjct: 398 DYNHPNFQDDELVVPYQEYFD-RLISRVKSYL--AGKCTQVVLVASNRDAHHHPVYPTPE 454
Query: 458 F----DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDR 513
+ +Q PD I L +P T + N +++G ++D L L+ E++ R
Sbjct: 455 YSLHKSVQSPD----IHVLPDPCTLDINGLRLGITSIDCLMHLARSEVALTQSSPDKLTR 510
Query: 514 MEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVL 573
+ Y L+ + +YPLYPPA+ I +D L ++ ++ P ++ LPSDM++F K +
Sbjct: 511 LGNYILNQAC------YYPLYPPAKEINVDSELWEKYAFLNEKPHVLFLPSDMRHFCKSI 564
Query: 574 SLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNA 618
+ V +NP RL+K T+A + H P M N
Sbjct: 565 N-----------DSVILNPERLSK----RTYARM--HIEPPMGNG 592
>gi|195449186|ref|XP_002071963.1| GK22573 [Drosophila willistoni]
gi|194168048|gb|EDW82949.1| GK22573 [Drosophila willistoni]
Length = 616
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 175/664 (26%), Positives = 290/664 (43%), Gaps = 132/664 (19%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEV-LKKCLTFCINYNLK-PSDLVSSWEVYYLNR-QLDEST 57
M+ EIK +F + G V+ EV L KC+ ++YN+ ++ V W + L+ DE T
Sbjct: 1 MDAEIKQQFDEMG---VEPTEVVLDKCMELALSYNVNDATEFVEQWMAFSLSHLHGDEPT 57
Query: 58 VKD-DEMDGFMLHL--------QNEQK-EAIIKEEPS-----------LHIYSSKDVDMI 96
+++ E + +L L QN QK + P+ L Y K+ + +
Sbjct: 58 IENLGEFERKVLQLRRDKVGSRQNNQKSRSSTLSTPTVASASIIDSSSLATYGVKEDESM 117
Query: 97 L----NDEDENIAEDILGTPPDN--------LK---LYSDALDSTYKANANGYSSD---- 137
L + +N + + TP N LK L+S A + + A S+D
Sbjct: 118 LGLNYDYSADNGPDSAMHTPKANKNSARTGSLKSGVLFSPASYTPHSAKRTPTSTDTVVG 177
Query: 138 KPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHG 197
+P +V FG KL+ ++ +EH T+ M+H
Sbjct: 178 RPGDIVDTFGH--PKLISG-------SSWQAQVEHSVPVTQK--------------MLHK 214
Query: 198 SGPEPG---CRFMYDRTEDRFNALENRIRKHANALVSSGLYEE--------PTDP-TVAS 245
P C +M+D +R N L +R LV L E P D ++ +
Sbjct: 215 ESPLTADNLC-YMHDLLSERCNDLYDRFLDIGEGLVEKKLGAEGAAECNWYPQDRHSLEA 273
Query: 246 QRTLFAVGMICCDGDGHLNDKSVLLQS-SVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
L AVGM+ + DG L+ S LL + + L+ ++ S+FPGQVV ++G
Sbjct: 274 LHMLHAVGMVHSEDDGPLDPHSALLAVLDADEPQNSFLTLNFSRIKSASIFPGQVVLLKG 333
Query: 305 SNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
P G+ + ++ + L P + LD+E+ ++AAGPF
Sbjct: 334 FVPKGNTFVVEEIYTERKLT--------PPLPLKLDRELQ------------FVVAAGPF 373
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR 424
T + +L+++PL +L+ Y K +P +L+L GPFV++EH + + FD F I+
Sbjct: 374 THSTDLFYDPLHDLLKYLKDHRPDVLLLTGPFVEAEHKMVAE--LAEGFDSFFEKMIV-- 429
Query: 425 LQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIK 484
+E +G + ++V S RDA V P PP ++ I + L +P + + I
Sbjct: 430 --GIMEVVGCHTQVLMVSSQRDAMAHSVYPTPPPVMR--RIYPNLHLLPDPSIVDLDGIT 485
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLD 543
VG + D++ L E + + +R+ + G FYP+ PP E + D
Sbjct: 486 VGVTSTDIVSHLLSHEFAL-----NAGERLHRAINHLFNQGS---FYPMCPPGDENMCYD 537
Query: 544 FSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGT 603
LAQ+ + +P+I+ILPSD ++FI+++S C+ +NPGRLA +G GT
Sbjct: 538 SLLAQKYAQLKQLPNILILPSDQRHFIRLVS-----------DCLVINPGRLANTKG-GT 585
Query: 604 FAEI 607
FA
Sbjct: 586 FARF 589
>gi|156059150|ref|XP_001595498.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980]
gi|154701374|gb|EDO01113.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 664
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 192/408 (47%), Gaps = 64/408 (15%)
Query: 242 TVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ ASQ T + AVG I CD +G LN S++L++S G R+ L + K+ F FPGQ
Sbjct: 252 SAASQSTNEIVAVGRIACDSAEGKLNPSSIVLETSRRMGAGLRIPLKIDKMRGFQFFPGQ 311
Query: 299 VVGIEGSNPSGHCLIASKLVD--------QIPLPVDAVVDVHPSMKQALDQEIHSTVVIS 350
+V ++G N SG S++++ P +D V A+D + S
Sbjct: 312 IVALKGINASGEDFTVSEILEPPLLGVAASTPASLDDHVRRLRGGSDAMDDD-------S 364
Query: 351 RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD 410
P +++II +GPFT DNL FEPL + S A +L+L GPF+D +HP I G D
Sbjct: 365 DPAPLNIIIGSGPFTADDNLDFEPLHAICSQAADNYADVLVLTGPFLDIDHPLIASGDFD 424
Query: 411 -----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPF 458
++ IF L I S + +L+PS++DA + PQ PF
Sbjct: 425 LPEEVLANPDSATMTAIFKLLITPAFTQLTSSHPS-ITILLIPSVKDAIDRHAAWPQEPF 483
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM-SRCSKDGTSNDRMEIY 517
+ + + + NP T N+I +G + D+L +L EE+ +D T R+ Y
Sbjct: 484 PRKDFGLPKAVRVVGNPMTIALNEIVMGISSQDILYELRHEEIVGGKPQDSTLLARLPKY 543
Query: 518 SLDISLMGPAFFFYPLYPPAE-----------GIP----LDFSLAQEALTISTIPDIIIL 562
++ F+PL+PP + GIP LD S + I+ PD++++
Sbjct: 544 LIE------QRHFFPLFPPVQRSQLPKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVV 597
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
PS + F KV+ + + +NPG L+K + +GT+A++ +
Sbjct: 598 PSSLPPFAKVV-----------ESVLVINPGYLSKRKAAGTYAKLTVY 634
>gi|340905257|gb|EGS17625.1| DNA polymerase alpha-primase complex-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 718
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 198/439 (45%), Gaps = 64/439 (14%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLL 270
+DR +R+H N + + +P S + AVG I CD +G LN SV+L
Sbjct: 276 DDRIEEFITLVREHHN--IDDSAF---GNPAAQSTSEIVAVGRIACDSLEGKLNPSSVVL 330
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDA--- 327
++S G RV L L +L + LFPGQ++ G N SG A +++ LP A
Sbjct: 331 ETSRRTGAGLRVPLGLSRLKSYQLFPGQIIACRGINSSGKEFTAHEILSLPLLPNAASSP 390
Query: 328 -VVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
V+ H S + D + T S ++++IA+GP+T DNL FEPL L + A
Sbjct: 391 DVLQSHISRLRGRDPDAMDTDDASPAPPLNIMIASGPYTADDNLLFEPLATLCAEAADSY 450
Query: 387 PQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSE 435
LL+L GPF+D+EHP + G D ++ +F I S
Sbjct: 451 TDLLLLTGPFLDAEHPLLSTGDFDLPAEANIDPDKATMSTVFRCLISPHFHRLASANPS- 509
Query: 436 VRAILVPSIRD--ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
V +LVPS+RD A H PQ F + + + + NP T N++ +G + D+L
Sbjct: 510 VTVLLVPSVRDLLAKH-VSWPQEAFSRKELGLPKCVKIVGNPSTVNVNEMVLGVSSQDIL 568
Query: 494 KQLSGEEM-SRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE---------GIP-- 541
+L EE+ S G S R Y ++ F+PL+PP + GIP
Sbjct: 569 WELRHEELVSAGVGTGDSLSRACRYLIE------QRHFFPLFPPTDRRKLPKTGGGIPGT 622
Query: 542 ----------LDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
LD S + + PD++++PS + F KV+ + + +N
Sbjct: 623 EGAGIPPGAMLDISYLKLGEFLHVRPDVLVVPSALSPFAKVV-----------ESVLVIN 671
Query: 592 PGRLAKGEGSGTFAEIYYH 610
PG L+K G+GT+A++ +
Sbjct: 672 PGTLSKRRGAGTYAKMLVY 690
>gi|290982320|ref|XP_002673878.1| DNA polymerase alpha subunit B [Naegleria gruberi]
gi|284087465|gb|EFC41134.1| DNA polymerase alpha subunit B [Naegleria gruberi]
Length = 544
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 65/431 (15%)
Query: 198 SGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICC 257
SGP ++MYD+ + + L R+ ++ E S + +G I
Sbjct: 137 SGP---VKYMYDKLYKQASVLLERLEDVGAKILEYHNIESAKPLNYHSDQPEVYIGRILA 193
Query: 258 D---GDGHLNDKSVLLQ--SSVEHSGGQRVRLDLHKLG-----EFSLFPGQVVGIEGSNP 307
+ GD LN S+LL+ ++ E S + ++L K G +LFPGQ+V I+G N
Sbjct: 194 ESVTGDDKLNPASILLEGLTNAETSDCKVIKLSFDKFGLDSGVSQTLFPGQIVAIKGLN- 252
Query: 308 SGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTT 367
S L K+ PL D Q D++ ++I +++A GPFT
Sbjct: 253 SVQGLKVEKIYTGAPL------DAPEDQPQPSDEK----------KKIKIMVACGPFTLQ 296
Query: 368 DNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQD 427
N+ ++PLK LI+ + +P +L+L+GPF+ ++ +K G D +F+ F + +L+
Sbjct: 297 HNVLYDPLKNLITLVETNEPNVLVLVGPFLSEDNALVKSGFMDETFESTFENRFIAKLKT 356
Query: 428 YVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEA-----NQ 482
+ ++ R IL+PS++D N DFV PQP +I+ + +I S NP TF N
Sbjct: 357 ----IETDCRVILIPSLKDVNSDFVFPQPAIEIE--NGSSKIQSFPNPSTFSISSPSFNP 410
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPL 542
IK+G ++D +K + +E + G D+ E Y + + ++YP P+ IPL
Sbjct: 411 IKIGVTSIDAIKTIKEKEYTF----GYVEDQTEHY---LKAVLEQQYYYPRLLPSSEIPL 463
Query: 543 DFSL---AQEALTISTIPDIIILPSD-MKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
D SL + +L I P+IIILPSD ++ KV+S + +NP RL
Sbjct: 464 DHSLLNGTKSSLKIEESPNIIILPSDHLETCCKVIS-----------NTIVINPTRLCNN 512
Query: 599 EG--SGTFAEI 607
+ G++A I
Sbjct: 513 QNRKEGSYAII 523
>gi|221459889|ref|NP_733206.3| DNA polymerase alpha 73kD [Drosophila melanogaster]
gi|229462839|sp|Q9VB62.2|DPOA2_DROME RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 73 kDa subunit
gi|220903233|gb|AAF56680.4| DNA polymerase alpha 73kD [Drosophila melanogaster]
Length = 609
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 165/649 (25%), Positives = 265/649 (40%), Gaps = 106/649 (16%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
MEEE+K +F + G D VL +C I YN+ ++ V W + L+ E
Sbjct: 1 MEEELKQQFDEMGVEPADA--VLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAI 58
Query: 60 DDEMDGFMLHLQNEQKEA---------------IIKEEPSLHIYSSKDVDMILNDEDENI 104
++ D LQ + +A +++ SL Y + D +L+D
Sbjct: 59 ENLGDFERKVLQLRKDKAGYKATGQKAKSYGSPSVQDTSSLATYGVMEDDPMLDDYVSES 118
Query: 105 AEDILGTPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFN-INNLP 163
A D K SD AN G + P+ +R L N + P
Sbjct: 119 AVDSSALHTPKAKKQSD-----RTANLKGAALFSPASYTPQSAKRKAGLETPSNSVAGKP 173
Query: 164 NTENGCIEHDD----ENTEDDIIKRIKTGKKCSLMVHGSGPE--PGCRFMYDRTEDRFNA 217
H + + + + +K ++H P +M D DR +
Sbjct: 174 GDIVDTFGHPKLLAGSSWQSQMEHTVPVTQK---LLHNDAPLTIANLGYMNDLLTDRCHN 230
Query: 218 LENRIRKHANALVSSGLYEE--------PTDPTV-ASQRTLFAVGMICCDGDGHLNDKSV 268
L R + ALV L + P D V S L AVGMI + DG L+ S
Sbjct: 231 LRVRFNQTGPALVDKKLGQAGAAECIWYPQDRQVLQSAGGLHAVGMIHSEDDGPLDAHSA 290
Query: 269 ---LLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIAS------KLVD 319
+L VE + L+ ++ S+FPGQVV +G P G + KL
Sbjct: 291 FMAVLDDDVEDEMDPTLTLNFSRVKSASIFPGQVVLAKGFIPRGKTFMVEEIHTERKLTP 350
Query: 320 QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI 379
PL +D E+ ++A+GPFT + +L++EPL +L+
Sbjct: 351 ATPLQID--------------------------RELQFVVASGPFTDSTDLFYEPLHDLL 384
Query: 380 SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAI 439
Y K +P +L+L GPF+D++H + G +FD F + + +E +GS +
Sbjct: 385 KYLKDHRPDVLVLTGPFLDADHKMV--GELAETFDTFFE----KMIGGIMESIGSHTAVL 438
Query: 440 LVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGE 499
+V S +DA V P PP ++ + L +P + + +G + DV+ L
Sbjct: 439 VVTSQKDAMALSVYPTPPPALR--RTYPNLYMLPDPSLVDLDGFTLGVTSTDVVDHLLSH 496
Query: 500 EMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPD 558
E + + +RM + G FYPLYPPA E + D LA + + +P+
Sbjct: 497 EFAV-----NAGERMHRAINHLFHQGS---FYPLYPPADEDMAYDSQLALKYAQLKQLPN 548
Query: 559 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++ILPSD ++FI++++ C+ +NPGR+A +G GTFA
Sbjct: 549 VLILPSDQRHFIRLVN-----------DCLVINPGRVADKKG-GTFARF 585
>gi|358392300|gb|EHK41704.1| hypothetical protein TRIATDRAFT_134831 [Trichoderma atroviride IMI
206040]
Length = 654
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 203/434 (46%), Gaps = 64/434 (14%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLL 270
+DR + + +R+H N L S T AS + AVG I D +G LN S++L
Sbjct: 222 DDRIDDFIDLVREHHN-LEDSAFGNAAT----ASTTEVVAVGRIASDALEGKLNAASIVL 276
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDA--- 327
++S G RV L L + ++ FPGQ+V + GSN +G I +++D LP A
Sbjct: 277 ETSRRMGRGLRVPLKLDGIRGWNFFPGQIVALRGSNITGDEFIVKEILDMPLLPSAASSP 336
Query: 328 -VVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
++ H ++ L + + S P +S+I AAGP+T DNL +EPL+ L + A
Sbjct: 337 SALEAH---REKLKGDPDAMDSDSAPTPLSIIYAAGPYTADDNLDYEPLQALCNQAADTY 393
Query: 387 PQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIF-HL--EILRRLQDYVEYM 432
LIL GPF+D +HP I G D ++ + +F HL L RL ++
Sbjct: 394 ADALILTGPFLDIDHPLIATGDFDLPEEATYDSDTANMNTVFKHLVAPALSRLASANPHL 453
Query: 433 GSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVD 491
ILVPS+RD N PQ + + + ++NP T N++ +G + D
Sbjct: 454 ----TVILVPSVRDVLNKHVSWPQDTIPRRELGLPKSVRIVSNPMTLSINEVVLGLSSQD 509
Query: 492 VLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP--------------- 536
VL +L EE+++ + G R+ Y ++ F+P++PP
Sbjct: 510 VLYELRNEEVTKGAPAGDLMRRLCRYLVE------QRHFFPVFPPTDRSRLPKTGTQHGL 563
Query: 537 AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLA 596
A G LD S + ++ PD++++PS + F KV+ + + +NPG L+
Sbjct: 564 ATGAMLDVSYLKLGEMVNVRPDVMLMPSSLPPFAKVV-----------ESVLAINPGSLS 612
Query: 597 KGEGSGTFAEIYYH 610
K G GT+A + +
Sbjct: 613 KRRGPGTYARMTLY 626
>gi|194907522|ref|XP_001981570.1| GG11537 [Drosophila erecta]
gi|190656208|gb|EDV53440.1| GG11537 [Drosophila erecta]
Length = 609
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 169/664 (25%), Positives = 278/664 (41%), Gaps = 136/664 (20%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
MEEE+K +F + G D VL +C I YN+ ++ V W + L+ E
Sbjct: 1 MEEELKQQFDEMGVEPADP--VLGRCAELAITYNIHDATEFVEQWMAFSLSHLHGEDPAI 58
Query: 60 DD--EMDGFMLHLQNEQKEAI-------------IKEEPSLHIYSSKDVDMILND--EDE 102
++ + + +L L+ ++ + ++E SL Y + D +++D +
Sbjct: 59 ENLGDFERKVLQLRKDKAGSKPTTQRPKSYAPSDVQETSSLATYGVMEDDPMIDDYFSES 118
Query: 103 NIAEDILGTP--------PDNLK---LYSDALDSTYKA-------NANGYSSDKPSKLVT 144
+ +L TP NLK L+S A + A + + KP +V
Sbjct: 119 AVDSSVLHTPKAKKDVGRTSNLKGGVLFSPASYTPQSAKRKAGLETPSNSVAGKPGDIVD 178
Query: 145 PFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGC 204
FG KLV ++ +EH T+ ++H P
Sbjct: 179 TFGH--PKLVAG-------SSWQSQMEHTVPVTQK--------------LLHNDAPLTIA 215
Query: 205 RFMY--DRTEDRFNALENRIRKHANALVSSGLYEE--------PTDPTV-ASQRTLFAVG 253
F Y D DR + L R + ALV L + P D V S L AVG
Sbjct: 216 NFGYMNDLLTDRCHNLRVRFNQTGPALVDKKLGQAGAAECIWYPQDRQVLQSAGGLHAVG 275
Query: 254 MICCDGDGHLNDKS---VLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
MI + DG L+ S V++ VE + L+ ++ S+FPGQVV +G P G
Sbjct: 276 MIHSEDDGPLDAYSAFMVVIDDDVEDEMDPTLTLNFSRVKSASIFPGQVVLAKGFIPRGK 335
Query: 311 CLIAS------KLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
+ KL PL +D E+ ++A+GPF
Sbjct: 336 TFMVEEIHTERKLTPATPLQID--------------------------RELQFVVASGPF 369
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR 424
T + +L++EPL +L+ Y K +P +L+L GPF+D++H + G +FD F +
Sbjct: 370 TDSTDLFYEPLHDLLKYIKDHRPDVLVLTGPFLDADHKMV--GELAETFDTFFE----KM 423
Query: 425 LQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIK 484
+ +E +GS ++V S +DA V P PP ++ + L +P + + I
Sbjct: 424 IAGIMEAVGSHTAVLMVTSQKDAMALSVYPTPPPTLR--RNYPNLYMLPDPSLVDLDGIT 481
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLD 543
+G + V+ L E + + +RM + G FYPLYPPA E + D
Sbjct: 482 LGVTSTYVVDHLLSHEFAV-----NAGERMHRAINHLFHQGS---FYPLYPPADEDMAYD 533
Query: 544 FSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGT 603
LA + + +P+++ILPSD ++F+++++ C+ +NPGR+A +G GT
Sbjct: 534 SQLALKYAQLKQLPNVLILPSDQRHFVRLVN-----------DCLVINPGRVADKKG-GT 581
Query: 604 FAEI 607
FA
Sbjct: 582 FARF 585
>gi|195112560|ref|XP_002000840.1| GI10451 [Drosophila mojavensis]
gi|193917434|gb|EDW16301.1| GI10451 [Drosophila mojavensis]
Length = 597
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 158/628 (25%), Positives = 282/628 (44%), Gaps = 78/628 (12%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNR-QLDESTV 58
ME E++ +F + G VL+KC+ + Y++ ++ V W + L+ DE T
Sbjct: 1 MEAELQQQFDEMGIE--PSAAVLEKCMELALTYSINDATEFVEQWMAFSLSHLNGDEPTN 58
Query: 59 KD-DEMDGFMLHLQ-----NEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTP 112
++ E + +L ++ N++ K +P+ SS ++ ED+ + ++ +G
Sbjct: 59 ENLGEFERKVLQVKREKVGNKKTTHYTKSQPAALEASSLATYGLI--EDDPMMDEYVGKS 116
Query: 113 PDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEH 172
AL+ + + S P+ +RT V N P H
Sbjct: 117 GSPQPKTPKALNKQSRLKSGAAFS--PASFTPQSAKRTPAADVA-TTNGKPGDIVDSFGH 173
Query: 173 DDENTEDDIIKRI-KTGKKCSLMVHGSGPE--PGCRFMYDRTEDRFNALENRIRKHANAL 229
+I +T ++H P R+M D DR + L +RI AL
Sbjct: 174 PKLIAACTWQSKIEQTLPVVQKLLHNDAPLTISNLRYMNDLLYDRCDELHDRIVDIGQAL 233
Query: 230 V-----SSGLYEEPTDP----TVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQ 280
V S+G E P T+ + L AVGMI D DG L+ S LL +V ++ +
Sbjct: 234 VEKKLGSTGAAECSWYPQDRHTLDALHVLHAVGMIHSDDDGPLDAHSALL--AVLNTDEK 291
Query: 281 RVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALD 340
+ L+ ++ S+FPGQVV +G P G + ++ D + P +K +D
Sbjct: 292 CLALNFSQIKSASIFPGQVVLAKGFIPRGDTFVVEEIY------TDRKLTPPPPLK--VD 343
Query: 341 QEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSE 400
+++H ++AAGP+T + +L+++P+ +L+ Y +P +L+L GPF+D+E
Sbjct: 344 RDVH------------FVVAAGPYTHSTDLFYDPMHQLLKYLLEHRPDVLLLTGPFLDAE 391
Query: 401 HPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDI 460
H + + +F+ F + + +E +G+ +LV S +DA V P P +
Sbjct: 392 HKLVVE--LAETFESFFE----KMIAGIMEAVGTSTTVLLVSSQKDAMTPAVYPTPSPMV 445
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
+ + L +P + + I +G + DV+ L +E + + +RM
Sbjct: 446 R--KTYPNLHMLPDPSLVDLDGITLGVSSTDVIDHLLSQEFA-----ANAGERMH---RA 495
Query: 521 ISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 579
I+ + FYP+ PPA E + D LAQ+ + +P+++ILPSD ++FI++++
Sbjct: 496 INHLFNQGTFYPICPPADENMSYDSQLAQKYAQLKQLPNVLILPSDQRHFIRLVN----- 550
Query: 580 EGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
C+ +NPGRLA +G GTFA
Sbjct: 551 ------DCLVINPGRLADNKG-GTFARF 571
>gi|332023529|gb|EGI63765.1| DNA polymerase alpha subunit B [Acromyrmex echinatior]
Length = 573
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/607 (23%), Positives = 256/607 (42%), Gaps = 105/607 (17%)
Query: 17 VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKE 76
++ VL KC FC NY++ L W + +N D D+
Sbjct: 18 IENDAVLDKCFEFCNNYDVDLDKLTELWLTFCVNNDADIQPTIDN--------------- 62
Query: 77 AIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSS 136
+IK E H+ KD + + +EN +D+L S Y +G SS
Sbjct: 63 -LIKME---HLILKKDYKLKESHYNEN--DDVL---------------SMYGCTESGPSS 101
Query: 137 DK----PSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDD---------IIK 183
+ P V R + +++ + TEN + + N D ++
Sbjct: 102 KRARRSPEVEVDADTRADKTRAAEYSFSPATCTENSSVSSNQRNITDKKILLSIGETVLS 161
Query: 184 RIKTGKKCSLMVHGSGPE--PGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDP 241
+TG + P R+MY+ + + L + + + L + L +
Sbjct: 162 WKRTGNFDVQVTKSDEPHVPSDARYMYEVLSRQGHILTHVCQNLGSRLFKTWLKASGNNT 221
Query: 242 TVASQRTLFAVGMICCDGDGHLNDK-----SVLLQSSVEH---SGGQRVRLDLHKLGEFS 293
+ + + V G +N K +V L+ S SG + LD + ++S
Sbjct: 222 ELRYVKNVRNVSQTNFRTFGRINAKKDTTNTVTLEGSTRRKGISGADTIELDFRNVKQYS 281
Query: 294 LFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPE 353
+F GQ+V +E NP G L ++ + P+ P+++
Sbjct: 282 VFSGQIVAVEAINPVGDTLYVKEIFAKSYAPLAFT----PTLES---------------- 321
Query: 354 EISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSF 413
+++ +AAGPFT + N++++ L +L+ +P +LIL+GPF++ HP+I+ +
Sbjct: 322 RVNIFVAAGPFTPSSNMHYQALWDLMERVASDEPHVLILIGPFLEYTHPEIQDNVIKDTH 381
Query: 414 DEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLT 473
E+F +IL R+ +E + I++ S RD +H+ + P P + I + ++L
Sbjct: 382 QELFE-KILTRI---MESTRRNTQVIVIASNRDIHHEPIFPTPQYTIFNRKLSQNYSNLK 437
Query: 474 ---NPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF 530
+P + +K+G +VDV+K + EE+S S D S R+ + L + F
Sbjct: 438 VMPDPCILDIADLKIGITSVDVIKHIGKEEISNVSGDRLS--RLVNHVLTQTC------F 489
Query: 531 YPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
YP+YPP+E + +D L ++ P ++ILPSDM+ + KV++ +C+ V
Sbjct: 490 YPVYPPSEDLNVDTELWEKCAFFDQQPHLLILPSDMRCYCKVIN-----------ECMIV 538
Query: 591 NPGRLAK 597
NP R+ K
Sbjct: 539 NPERMHK 545
>gi|154304222|ref|XP_001552516.1| hypothetical protein BC1G_08381 [Botryotinia fuckeliana B05.10]
Length = 726
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 191/408 (46%), Gaps = 64/408 (15%)
Query: 242 TVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ ASQ T + +VG I CD +G LN S++L++S G R+ L + K+ F FPGQ
Sbjct: 258 SAASQSTNEIVSVGRIACDSAEGKLNPSSIVLETSRRMGAGLRIPLKVDKMSGFQFFPGQ 317
Query: 299 VVGIEGSNPSGHCLIASKLVD--------QIPLPVDAVVDVHPSMKQALDQEIHSTVVIS 350
+V ++G N SG S++++ P +D V A+D++ S
Sbjct: 318 IVALKGINASGEHFTVSEILEPPLLGVAASTPAGLDEHVRRLRGGPDAMDED-------S 370
Query: 351 RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD 410
P +++II +GPFT DNL FEPL + S A +LIL GPF+D +HP I G D
Sbjct: 371 DPAPLNIIIGSGPFTADDNLDFEPLHAICSQAADTYADVLILTGPFLDIDHPLIASGDFD 430
Query: 411 -----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPF 458
++ IF I + ++VPS++DA + PQ PF
Sbjct: 431 LPEEALADPDTATMSAIFKHLITPAFTQLAS-THPRITILIVPSVKDAIDKHAAWPQEPF 489
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIY 517
+ + + + NP T N+I +G + D+L +L EE + +D T R+ Y
Sbjct: 490 PRKDVGLPKAVRVIGNPMTIALNEIVMGISSQDILYELRHEEIIGGKPQDPTLLARLPKY 549
Query: 518 SLDISLMGPAFFFYPLYPPAE-----------GIP----LDFSLAQEALTISTIPDIIIL 562
++ F+PL+PP + GIP LD S + I+ PD++++
Sbjct: 550 LIE------QRHFFPLFPPVQRTQLPKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVV 603
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
PS + F KV+ + + +NPG L+K G+GT+A++ +
Sbjct: 604 PSSLPPFAKVV-----------ESVLVINPGYLSKRRGAGTYAKLTVY 640
>gi|347828114|emb|CCD43811.1| similar to DNA polymerase alpha/primase associated subunit
[Botryotinia fuckeliana]
Length = 670
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 191/408 (46%), Gaps = 64/408 (15%)
Query: 242 TVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ ASQ T + +VG I CD +G LN S++L++S G R+ L + K+ F FPGQ
Sbjct: 258 SAASQSTNEIVSVGRIACDSAEGKLNPSSIVLETSRRMGAGLRIPLKVDKMSGFQFFPGQ 317
Query: 299 VVGIEGSNPSGHCLIASKLVD--------QIPLPVDAVVDVHPSMKQALDQEIHSTVVIS 350
+V ++G N SG S++++ P +D V A+D++ S
Sbjct: 318 IVALKGINASGEHFTVSEILEPPLLGVAASTPAGLDEHVRRLRGGPDAMDED-------S 370
Query: 351 RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD 410
P +++II +GPFT DNL FEPL + S A +LIL GPF+D +HP I G D
Sbjct: 371 DPAPLNIIIGSGPFTADDNLDFEPLHAICSQAADTYADVLILTGPFLDIDHPLIASGDFD 430
Query: 411 -----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPF 458
++ IF I + ++VPS++DA + PQ PF
Sbjct: 431 LPEEALADPDTATMSAIFKHLITPAFTQLASTH-PRITILIVPSVKDAIDKHAAWPQEPF 489
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIY 517
+ + + + NP T N+I +G + D+L +L EE + +D T R+ Y
Sbjct: 490 PRKDVGLPKAVRVIGNPMTIALNEIVMGISSQDILYELRHEEIIGGKPQDPTLLARLPKY 549
Query: 518 SLDISLMGPAFFFYPLYPPAE-----------GIP----LDFSLAQEALTISTIPDIIIL 562
++ F+PL+PP + GIP LD S + I+ PD++++
Sbjct: 550 LIE------QRHFFPLFPPVQRTQLPKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVV 603
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
PS + F KV+ + + +NPG L+K G+GT+A++ +
Sbjct: 604 PSSLPPFAKVV-----------ESVLVINPGYLSKRRGAGTYAKLTVY 640
>gi|358388584|gb|EHK26177.1| hypothetical protein TRIVIDRAFT_73573 [Trichoderma virens Gv29-8]
Length = 649
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 200/431 (46%), Gaps = 58/431 (13%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLL 270
+DR + + +R+H S Y + AS + AVG I D +G LN S++L
Sbjct: 217 DDRIDDFVDLVREH-----HSLEYSAFGNAATASTSEIVAVGRIASDSLEGKLNAASIVL 271
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDA--- 327
++S G RV L L + +S FPGQ+V + GSN +G I +++D LP A
Sbjct: 272 ETSRRMGRGLRVPLKLDGVQSWSFFPGQIVALRGSNITGDEFIVKEILDMPLLPSAASSP 331
Query: 328 -VVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
++ H ++ L + + S P +S+I AAGP+T DNL +EPL+ L + A
Sbjct: 332 AALEAH---REKLRGDPDAMDADSDPAPLSIIYAAGPYTADDNLDYEPLQALCNQAADTY 388
Query: 387 PQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSE 435
L+L GPF+D +HP I G D ++ + +F + L +
Sbjct: 389 ADALVLTGPFLDIDHPLIATGDFDLPEDATYDPDTANMNTVFKYLVAPALS-RLASANPH 447
Query: 436 VRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
+ ILVPS+RD V PQ + + + ++NP T N++ +G + DVL
Sbjct: 448 ITVILVPSVRDVLDKHVSWPQDTIPRRELGLPKSVRIVSNPMTLSMNEVVLGLSSQDVLY 507
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEG 539
+L EE+S+ + G R+ + ++ ++P++PP A G
Sbjct: 508 ELRSEEISKGAPPGELMRRLCRHLVE------QRHYFPVFPPTDRSRLPKTGTEDGLATG 561
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
LD S + +S PD++++PS + F KV+ + + +NPG L+K
Sbjct: 562 AMLDVSYLKLGEMVSVRPDVMLMPSFLPPFAKVV-----------ESVLAINPGSLSKRR 610
Query: 600 GSGTFAEIYYH 610
G+GT+A + +
Sbjct: 611 GAGTYARMTLY 621
>gi|451995337|gb|EMD87805.1| hypothetical protein COCHEDRAFT_1227110 [Cochliobolus
heterostrophus C5]
Length = 695
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 167/677 (24%), Positives = 280/677 (41%), Gaps = 128/677 (18%)
Query: 20 GEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQN------- 72
+VL + + C Y++ P +L W+ Y + +E+ + F +Q+
Sbjct: 25 ADVLAELQSMCRLYSISPEELDFKWQAYNMKMGGEENKMDVKTAQDFKKTIQDALERESR 84
Query: 73 ---EQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKA 129
+Q+ + + +P+ DM+ E ++ P S ST K
Sbjct: 85 GKAQQRNEVKRGQPTPRAKGGDMYDML---------EGLVPNTP-RPSAPSGVNGSTVKR 134
Query: 130 NAN----GYSSDKPSKLVTPFGRRTEK----------LVVKFNINNLPNTEN---GCIEH 172
AN G ++K ++ +P G T K + N N++ TE G I
Sbjct: 135 KANFQTPGGKANKAHEMSSPGGFMTPKAETSGGPVFDFASRTNANDI--TEQFMQGDIAI 192
Query: 173 DDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVS- 231
+ +E+ RIK + R M + + L++RI + + L
Sbjct: 193 PEPPSEEPKEPRIKLKANTDMSKFS------YRTMAMKLSEASEVLDDRIDEFRDILKEF 246
Query: 232 SGLYEEP-TDPTVASQRTLFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKL 289
+GL E +P AS + AVG I CD +G LN S++L+ S H G+RV L++ L
Sbjct: 247 AGLDESAFGNPNYASPSEIIAVGRIACDTSEGKLNTASLVLEGSRRHGSGRRVPLNVEGL 306
Query: 290 GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVI 349
++ FPGQ+V + G+N SG + S+++ LP+ P A++ T
Sbjct: 307 QSYNFFPGQIVALRGTNASGDSFVVSEVLS---LPLLNPPATKPDELDAINARYLDTP-D 362
Query: 350 SRPEEI---SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKK 406
S P+ + +++IA+GP+TT NL F PL + A +IL+GPF+D+EHPQI+
Sbjct: 363 SDPDNVRPLTLMIASGPYTTEQNLDFAPLHAFLDKAAEAYADSIILVGPFLDAEHPQIRS 422
Query: 407 GTTD---------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF-VLPQP 456
G D ++ ++F I +Q + + + + +LVPS+RDA+H PQ
Sbjct: 423 GDFDAPPGVNPDQATMTDLFRHHISSAIQSFHKRVPT-CNVLLVPSLRDAHHHHAAFPQD 481
Query: 457 PF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDR 513
F ++ + +TNP T N++ VG ++D L L EE++ T+
Sbjct: 482 KFIKKELGFGAAGKMVQCVTNPMTVSMNEMTVGMSSLDNLDMLRREELTGGKARATN--- 538
Query: 514 MEIYSLDISLMGPAFFFYPLYPPAE----------------------------------- 538
IY M F PL+PP
Sbjct: 539 --IYERGARNMIEQRSFLPLFPPTGREKQQFMPTPIEEKVMKNNTANGERKEGEEVDEEQ 596
Query: 539 --------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
G LD S + ++ PDI+I PS ++ +KV+ + + V
Sbjct: 597 APSPFLPLGTMLDTSYLKLGEMLNVRPDILITPSVLQGTVKVV-----------ESVLIV 645
Query: 591 NPGRLAKGEGSGTFAEI 607
NPG L+K +GT+A +
Sbjct: 646 NPGTLSKRRAAGTYARV 662
>gi|367006837|ref|XP_003688149.1| hypothetical protein TPHA_0M01400 [Tetrapisispora phaffii CBS 4417]
gi|357526456|emb|CCE65715.1| hypothetical protein TPHA_0M01400 [Tetrapisispora phaffii CBS 4417]
Length = 667
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 192/406 (47%), Gaps = 73/406 (17%)
Query: 240 DPTVASQRTLFAVGMICCD---GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D +G LN S+ L++S G+RVRL+ K+ E SLF
Sbjct: 261 DPTIQSQSEIYAVGRIVPDSPTAEGFLNIDSLALEASRLMGIGRRVRLNFSKINECSLFC 320
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ++ ++G N G + ++++ +P P V V ++I ++ +I + +
Sbjct: 321 GQIIVLKGKNADGDYFMVDEILN-LPYPDSPVSTV---------EDIENSNMIQNGKSMK 370
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDS---- 411
+II +GP+ ++ +P+KE + K +P LI+ GPF+D I KG
Sbjct: 371 VIITSGPYFPENDFNVQPIKEFVDKINNKIKPHTLIMFGPFIDITQNCIAKGAIPQFHGV 430
Query: 412 -----SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDI 465
+ DEIF + L + + S ++ ILVPS RDA +H PQ FD + +
Sbjct: 431 TQQPRTLDEIF----TKVLVPLLSGINSSIQVILVPSTRDAISHHAAYPQDSFDRKKLQL 486
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDISL 523
TNP TF+ N++ GC VD+ K L +E+++ N DR+ + L
Sbjct: 487 PKNFKCFTNPSTFQLNEVFFGCSNVDIYKDL--KEVAKGGNTAMRNRFDRVSEHVLQQRR 544
Query: 524 MGPAFFFYPLYPPA------------------EGIPLD---FSLAQEALTISTIPDIIIL 562
+YP++P G L+ L + IS PD+II+
Sbjct: 545 ------YYPVFPGGIRKTAKILENKKKVIEHISGADLEVPYLGLTEFVGEIS--PDVIIM 596
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK-GEGSGTFAEI 607
PS+M++F +V+ + V +NPGR + G GTFAE+
Sbjct: 597 PSEMQHFARVV-----------QNVVMINPGRFVRPNGGRGTFAEM 631
>gi|195349906|ref|XP_002041483.1| GM10379 [Drosophila sechellia]
gi|194123178|gb|EDW45221.1| GM10379 [Drosophila sechellia]
Length = 609
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 168/662 (25%), Positives = 275/662 (41%), Gaps = 132/662 (19%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
MEEE+K +F + G D VL +C I YN+ ++ V W + L+ E
Sbjct: 1 MEEELKQQFDEMGVEPADS--VLGRCAELAITYNIHDATEFVEQWMAFSLSHLHGEDPAI 58
Query: 60 DDEMDGFMLHLQNEQKEAI---------------IKEEPSLHIYSSKDVDMILND--EDE 102
++ D LQ + +A +++ SL Y + D +L+D +
Sbjct: 59 ENLGDFERKVLQLRKDKACSKTTGQTVKSYGSPSVQDTNSLVTYGVMEDDRMLDDYVSES 118
Query: 103 NIAEDILGTP--------PDNLK---LYSDALDSTYKANANG-------YSSDKPSKLVT 144
+ L TP NLK L+S A + A + KP +V
Sbjct: 119 AVDSSALHTPKAKKESVRSSNLKGGVLFSPASYTPQSAKRKAGLETPSNSVAGKPGDIVD 178
Query: 145 PFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGC 204
FG KL+ ++ +EH T+ + + SL + G
Sbjct: 179 TFGH--PKLLAG-------SSWQSQMEHTVPVTQKLL------HNEASLTIANLG----- 218
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEE--------PTDPTV-ASQRTLFAVGMI 255
+M D DR + L R + ALV L + P D V S L A+GMI
Sbjct: 219 -YMNDLLTDRCHNLRVRFDQTGPALVDKKLGQAGAAECIWYPQDRQVLQSAGGLHALGMI 277
Query: 256 CCDGDGHLNDKSV---LLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCL 312
+ DG L+ S +L +E + L+ ++ S+FPGQVV +G P G
Sbjct: 278 HSEDDGPLDAHSAFMAVLDDDIEDEMDPTLTLNFSRVKSASIFPGQVVLAKGFIPRGKTF 337
Query: 313 IAS------KLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTT 366
+ KL PL +D E+ ++A+GPFT
Sbjct: 338 MVEEIHTERKLTPATPLQID--------------------------RELQFVVASGPFTD 371
Query: 367 TDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQ 426
+ +L++EPL +L+ Y K +P +L+L GPF+D++H + G +FD F + +
Sbjct: 372 STDLFYEPLHDLLKYLKDHRPDVLVLTGPFLDADHKMV--GELAETFDTFFE----KMIG 425
Query: 427 DYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVG 486
+E +GS ++V S +DA V P PP ++ + L +P + + + +G
Sbjct: 426 GIMEAIGSHTAVLVVTSQKDAMALSVYPTPPPTLR--RTYPNLYMLPDPSLVDLDGLTLG 483
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFS 545
+ DV+ L E + + +RM + G FYPLYPPA E + D
Sbjct: 484 VTSTDVVDHLLSHEFAV-----NAGERMHRAINHLFHQGS---FYPLYPPADEDMAYDSQ 535
Query: 546 LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA 605
LA + + +P+++ILPSD ++F+++++ C+ +NPGR+A +G GTFA
Sbjct: 536 LALKYAQLKQLPNVLILPSDQRHFVRLVN-----------DCLVINPGRVADKKG-GTFA 583
Query: 606 EI 607
Sbjct: 584 RF 585
>gi|452985626|gb|EME85382.1| hypothetical protein MYCFIDRAFT_42760 [Pseudocercospora fijiensis
CIRAD86]
Length = 661
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 200/419 (47%), Gaps = 86/419 (20%)
Query: 240 DPTVASQRTLFAVGMICCDGD-GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+P S + AVG I CD G LN +S+ L++S G RV L + + FPG+
Sbjct: 245 NPAAQSANEIIAVGRIACDQPIGKLNAQSLALETSRRMGAGMRVPLRMADGASYDFFPGK 304
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVI-----SRPE 353
+V ++G+N SG A+++ IP+P+ + + + D E+H+ ++ SRP
Sbjct: 305 IVALKGTNVSGEYFAATEV---IPMPI-----LPSAASRVEDIEVHNDRLVGTDGESRP- 355
Query: 354 EISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--- 410
+SM++A+GP+TT ++L F PL L+ A+R++ +++L+GPF+D EHP I G +
Sbjct: 356 -LSMLVASGPYTTENDLSFAPLYTLLEKAERERTDVVVLIGPFLDLEHPVIASGDFEDHL 414
Query: 411 ----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LP 454
++ ++F + I +Q + + + + I+VPS+RDA V +P
Sbjct: 415 PSGAKIEPDQATLTDVFRVLISGAIQKLAQAVPT-ITIIMVPSMRDAISKHVAWPQDRVP 473
Query: 455 QPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQL-SGEEMSRCSKDGTSNDR 513
+PP + Q+ + NP N++ VG + DVL ++ SG + DG R
Sbjct: 474 KPPLGLP-----RQVQFVANPMALSINEMVVGMSSQDVLSEIRSGNVYHKV--DGDMMGR 526
Query: 514 MEIYSLDISLMGPAFFFYPLYPP-------------------------AEGIPLDFSLAQ 548
+ + ++ S ++P++PP A G +D + +
Sbjct: 527 LAGHVIEQS------HYFPVFPPQAREDLPKPTGIEGEIPEPGGEERYAMGANIDLAYYK 580
Query: 549 EALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
PD++ILPS + F + + EG +C+NPG L+K G GTFA +
Sbjct: 581 LGEFWLARPDVLILPSTLMPFARFI------EG-----VLCINPGSLSKRRGPGTFAAL 628
>gi|346975446|gb|EGY18898.1| DNA polymerase subunit alpha B [Verticillium dahliae VdLs.17]
Length = 658
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 55/403 (13%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S GGQRV L++ + G FS FPGQ
Sbjct: 250 SAANQSTTPVIAVGRIASDSPEGKLNAASIVLETSRRTGGGQRVPLNMGQRG-FSFFPGQ 308
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLP----VDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
+V ++G N SG + ++D LP + A + H ++ L + + S P
Sbjct: 309 IVAVKGINSSGSEFLVEDVLDIPLLPNAASLPATLAAH---RERLRGDPDAMDSDSDPAP 365
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFD 414
++++ A+GP+T DNL FEPL+ L S A +IL GPF+D+EHP I G D D
Sbjct: 366 LNILFASGPYTADDNLDFEPLQALCSRAADTYADAVILAGPFIDAEHPLIAMGDFDLPED 425
Query: 415 EIFHLE----------ILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPP 463
+ + + + + V +LVPS+RD V PQ F +
Sbjct: 426 AVIDPDTATMTTVFKYLFTPALNRLAAANPAVTVLLVPSVRDMIDKHVSWPQDTFAKKDL 485
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDIS 522
+ I ++NP T N+ +G + D L +L EE ++ KD R+ Y L+
Sbjct: 486 GLHKAIRIISNPMTLSVNETVMGLSSQDALWELRHEEVVAGKPKDTVLLSRLCRYLLE-- 543
Query: 523 LMGPAFFFYPLYPPA-----------EGIP----LDFSLAQEALTISTIPDIIILPSDMK 567
++PL+PPA EG+P LD S + ++ PD++++PS +
Sbjct: 544 ----QRHYFPLFPPADRSKLPKTGTEEGLPPGAMLDVSYLKLGEMVNVRPDLLLVPSFLP 599
Query: 568 YFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F KV+ + + +NPG L+K G+GT+A + +
Sbjct: 600 PFAKVV-----------ESVLVINPGVLSKRRGAGTYARMTLY 631
>gi|296809716|ref|XP_002845196.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
gi|238842584|gb|EEQ32246.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
Length = 664
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 170/654 (25%), Positives = 268/654 (40%), Gaps = 105/654 (16%)
Query: 21 EVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNE-QKEAII 79
+VL + L+ + ++P +L WE Y L +E+ + D + F LQ+ ++E+
Sbjct: 23 DVLGELLSILQLHAIEPQELFYKWESYCLKMAGEETGLNLDSVRSFKRSLQDAIERESRA 82
Query: 80 K------EEPSLHIYSSKDV--------DMILNDEDENIAEDILGTPPDNLKLYSDALDS 125
K E+ S+ +S+ DM L+D N + + P + A D+
Sbjct: 83 KTQMRGAEKRSIGAATSRPAAGGNQGIFDM-LDDFAPNTPKRN-ASGPTGSSIKRKAFDT 140
Query: 126 TYKANAN-GYSSDKPSKLVTPF--------GRRTEKLVVKFNINNLPNTENGCIEHDDEN 176
+ +N G D P + TP G + N + T N I
Sbjct: 141 PTNSRSNKGVKLDSPGNVKTPSRPIDGAANGTSLTPFSARQNSGQVIETLNPHINMASAP 200
Query: 177 TEDDIIKRIKTG-----KKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVS 231
RIK KK S + DR D F + + K ++
Sbjct: 201 PAPYADSRIKLTANTDIKKFSYRPMAMKLSEASEILDDRI-DEFMMIVQKHHKLEDSAFG 259
Query: 232 SGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLG 290
+ ++ S R + AVG I D +G LN S++L++S G RV L + L
Sbjct: 260 NAAHQ--------STREIIAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDLLP 311
Query: 291 EFSLFPGQVVGIEGSNPSGHCLIASKL--VDQIPLPVDAVVDVHPSMKQALDQEIHSTVV 348
+ FPGQ+V + G N SG ++ + ++PLP+ +V +A ++++ S
Sbjct: 312 HINFFPGQIVALRGINASGEYFTVYEVLTIPRLPLPISLPAEV-----KATNEKLDSF-- 364
Query: 349 ISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGT 408
+ ++ + AAGP+TT DNL FEPL L A + LIL GPF+D EHP I G
Sbjct: 365 --GDQPLNYMFAAGPYTTDDNLAFEPLNALCEKAAEECADALILTGPFIDLEHPLIASGD 422
Query: 409 TD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV----- 452
D ++ +F I R L + + IL+PS+RDA V
Sbjct: 423 FDLPELKGLDPDTATLTTLFKHCISRPLTQLASKV-PNIYIILIPSVRDAVSKHVSWPQE 481
Query: 453 -LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN 511
LP+ + P Q +TNP N++ VG C D L +L EE+ G
Sbjct: 482 ILPKRELGLPP----KQARVVTNPVAISLNEVMVGLCASDTLYELRREEVV-----GGRP 532
Query: 512 DRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTI--------------- 556
++ S + F P++PP L S E+L I ++
Sbjct: 533 SESDLLSRLPRYLIEQRHFSPVFPPTARENLPKSGVDESLQIGSMLDTRYLRLGDWWKAR 592
Query: 557 PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
PDI+I PS + FIKV+ + + +NPG+L+K G GT+A+I H
Sbjct: 593 PDILITPSVLPGFIKVV-----------ESVLVINPGKLSKRRGPGTYAQIAVH 635
>gi|429851305|gb|ELA26503.1| DNA polymerase alpha primase associated subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 724
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 56/400 (14%)
Query: 243 VASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE-FSLFPGQ 298
ASQ T + AVG I D +G LN S++L+ S GGQRV L++ + + FS FPGQ
Sbjct: 316 AASQSTTAVIAVGRIASDAPEGKLNAPSLVLELSRRMGGGQRVSLNMRSVKKGFSFFPGQ 375
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLP----VDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
+V ++G N SG+ + ++++ LP A + H ++ L + + S P
Sbjct: 376 IVALKGINTSGNEYLVEEVLEVPLLPNAASTPATLAAH---REKLRGDPDAMDTDSDPAP 432
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD---- 410
+++I A+GP+T DNL FEPL L A L+L GPF+DSEHP I G D
Sbjct: 433 LNVIYASGPYTADDNLDFEPLHALCDQAADTYADALVLTGPFIDSEHPLIAMGDFDLPEE 492
Query: 411 -------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQP 462
++ +F L V S + +L+PS+RD V PQ +
Sbjct: 493 AVIDPDTATMSTVFKYLFSPALNRLVSANPS-ITILLIPSVRDVIDKHVSWPQDSVLKKD 551
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDIS 522
+ +TNP T N++ +G + D+L QL EE++ D R+ + L+
Sbjct: 552 LGLPKTARIVTNPMTLSMNEMVMGISSQDILWQLKHEELAARPSDTNPLSRLSRHLLE-- 609
Query: 523 LMGPAFFFYPLYPPA-----------EGIP----LDFSLAQEALTISTIPDIIILPSDMK 567
F+PL+PP EG+P LD S + ++ PD++I+PS +
Sbjct: 610 ----QRHFFPLFPPTDRQKLPKTGTEEGMPPGAMLDLSYLKLGEMVNVRPDVLIVPSFLP 665
Query: 568 YFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
F KV+ + + +NPG L+K G+GT+A +
Sbjct: 666 PFAKVV-----------ESVLVINPGYLSKRRGAGTYARL 694
>gi|303314407|ref|XP_003067212.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106880|gb|EER25067.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037495|gb|EFW19432.1| DNA polymerase alpha/primase associated subunit [Coccidioides
posadasii str. Silveira]
Length = 657
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 185/398 (46%), Gaps = 60/398 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++ + S G RV L + L LFPGQ+V I+
Sbjct: 259 STRKVIAVGRIASDSMEGRLNTASLVFEMSRRTGAGLRVPLKVDSLPSVQLFPGQIVAIK 318
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG A +++ LP A P + ++++ + S +++++A+GP
Sbjct: 319 GINASGEYFSALEVLQPPFLPPAAS---SPEIISSINERLSE----SGSAPLNILVASGP 371
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FEPL EL + A + L+L GPF+D EHP I G D ++
Sbjct: 372 YTTDDNLNFEPLNELCAKAAEQSIDTLVLTGPFLDIEHPLIATGDFDLPEINGLDPDTAT 431
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQ---PPFDIQPPDIIHQ 468
+F I R L + S + +LVPS+RDA N PQ P ++ P Q
Sbjct: 432 LSVLFRYCISRPLHRLAMAVPS-ITIVLVPSVRDAVNRHVSWPQDMLPRLELGLP---KQ 487
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPA 527
+ + NP T N+ G C+ DVL +L EE + +G R+ Y ++
Sbjct: 488 VRMVPNPVTISLNESVFGLCSYDVLYELRREEVLGGKPTEGNLLTRLSRYLIE------Q 541
Query: 528 FFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
F P++PP A G LD + + PD++I+PS + F+KV
Sbjct: 542 RHFSPVFPPSAREHLPKSGTENGIATGAMLDLRYLKLGEWWNVQPDVLIIPSVLPPFVKV 601
Query: 573 LSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ EG + +NPG ++K G GT+A++ H
Sbjct: 602 I------EG-----VLVINPGTVSKRRGPGTYAQLAVH 628
>gi|302408437|ref|XP_003002053.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
gi|261358974|gb|EEY21402.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
Length = 593
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 193/403 (47%), Gaps = 55/403 (13%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S GGQRV L++ + G FS FPGQ
Sbjct: 185 SAANQSTSPVIAVGRIASDSPEGKLNAASIVLETSRRTGGGQRVPLNMGQRG-FSFFPGQ 243
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLP----VDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
+V ++G N SG + ++D LP + A + H ++ L + + S P
Sbjct: 244 IVAVKGINSSGSEFLVEDVLDMPLLPNAASLPATLAAH---RERLRGDPDAMDSDSDPAP 300
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFD 414
++++ A+GP+T DNL FEPL+ L S A +IL GPF+D+EHP I G D D
Sbjct: 301 LNVLFASGPYTADDNLDFEPLQALCSRAADTYADAVILTGPFIDAEHPLIAMGDFDLPED 360
Query: 415 EIFHLE----------ILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPP 463
+ + + + + V +LVPS+RD V PQ F +
Sbjct: 361 AVIDPDTATMTTVFKYLFTPALNRLAAANPAVTILLVPSVRDIIDKHVSWPQDTFAKKDL 420
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDIS 522
+ I ++NP T N+ +G + D L +L EE+ KD R+ Y L+
Sbjct: 421 GLHKAIRIISNPMTLSVNETVMGLSSQDALWELRHEEVVVGKPKDTVLLSRLCRYLLE-- 478
Query: 523 LMGPAFFFYPLYPPA-----------EGIP----LDFSLAQEALTISTIPDIIILPSDMK 567
++PL+PPA EG+P LD S + ++ PD++++PS +
Sbjct: 479 ----QRHYFPLFPPADRSKLPKTGTEEGLPPGAMLDVSYLKLGEMVNVRPDLLLVPSFLP 534
Query: 568 YFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F KV+ + + +NPG L+K G+GT+A + +
Sbjct: 535 PFAKVV-----------ESVLVINPGVLSKRRGAGTYARMTLY 566
>gi|119174579|ref|XP_001239649.1| hypothetical protein CIMG_09270 [Coccidioides immitis RS]
gi|392869843|gb|EAS28372.2| DNA polymerase alpha/primase associated subunit [Coccidioides
immitis RS]
Length = 657
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 185/398 (46%), Gaps = 60/398 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++ + S G RV L + L LFPGQ+V I+
Sbjct: 259 STREVIAVGRIASDSMEGRLNTASLVFEMSRRTGAGLRVPLKVDSLPSVQLFPGQIVAIK 318
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG A +++ LP A P + ++++ + S +++++A+GP
Sbjct: 319 GINASGEYFSALEVLQPPFLPPAAS---SPEIISSINERLSE----SGSAPLNILVASGP 371
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FEPL EL + A + L+L GPF+D EHP I G D ++
Sbjct: 372 YTTDDNLNFEPLNELCAKAAEQSIDTLVLTGPFLDIEHPLIATGDFDLPEINGLDPDTAT 431
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQ---PPFDIQPPDIIHQ 468
+F I R L + S + +LVPS+RDA N PQ P ++ P Q
Sbjct: 432 LSVLFRYCISRPLHRLAMAVPS-ITIVLVPSVRDAVNRHVSWPQDMLPRLELGLP---KQ 487
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPA 527
+ + NP T N+ G C+ DVL +L EE + +G R+ Y ++
Sbjct: 488 VRMVPNPVTISLNESVFGLCSYDVLYELRREEVLGGKPTEGNLLTRLSRYLIE------Q 541
Query: 528 FFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
F P++PP A G LD + + PD++I+PS + F+KV
Sbjct: 542 RHFSPVFPPSAREHLPKSGTENGIATGAMLDLRYLKLGEWWNVQPDVLIIPSVLPPFVKV 601
Query: 573 LSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ EG + +NPG ++K G GT+A++ H
Sbjct: 602 I------EG-----VLVINPGTVSKRRGPGTYAQLAVH 628
>gi|115387293|ref|XP_001211152.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195236|gb|EAU36936.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 660
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 184/396 (46%), Gaps = 56/396 (14%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
SQ + AVG I D +G LN S++L++S G RV L + L +LFPGQ+V +
Sbjct: 262 SQNEIVAVGRIASDSLEGKLNTASLVLETSRRTGAGIRVPLKVDSLPSVNLFPGQIVALR 321
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVH-PSMKQALDQEIHSTVVISRPEEISMIIAAG 362
G N SG+ ++ LP A V + LD+ S ++++IA+G
Sbjct: 322 GINASGNYFSVKDVLPTPLLPSAASSAVTIDGINDRLDEAGSS--------PLNVLIASG 373
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
P+TT D+L FEPL E+ A LIL+GPF+D EHP + G D +
Sbjct: 374 PYTTDDSLDFEPLNEICQKAADSYADGLILMGPFLDIEHPLLASGDFDLPETDSYDPDTA 433
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQIT 470
+ +F I LQ + S + ++VPS+RDA V PQ + + Q+
Sbjct: 434 TLTTVFRHYISTPLQRLAAAVPS-ITIVMVPSVRDAVSKHVSWPQEQLPKKEFGLPKQVR 492
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPAFF 529
++NP T N+ +G C+ DVL +L EE + K+G R+ Y ++
Sbjct: 493 MVSNPVTLSLNETVIGMCSHDVLYELRREEAIHGRPKEGNLLTRLPKYLIE------QRH 546
Query: 530 FYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLS 574
FYP+YPP A G LD S + + PD++++PS + F+KV+
Sbjct: 547 FYPIYPPTAREALPKPGTEDGVATGAMLDTSYLKLGEWCNVRPDVLLVPSMLPPFVKVVD 606
Query: 575 LGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ +NPG L+K +GT+A++ H
Sbjct: 607 -----------SVLVINPGTLSKRRAAGTYAQMAIH 631
>gi|378726669|gb|EHY53128.1| DNA polymerase alpha subunit B [Exophiala dermatitidis NIH/UT8656]
Length = 662
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 203/429 (47%), Gaps = 62/429 (14%)
Query: 213 DRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVL 269
D L++RI + + +E A+Q T + AVG I D +G LN S++
Sbjct: 230 DSSEVLDDRIDDFMALIQQAHNLDESAFGNAAAQSTSEIVAVGRIASDTPEGKLNSASLV 289
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
L+ S G RV L + L + FPGQ+V + G+N SG +++ LP+ +
Sbjct: 290 LEMSRRMGAGLRVPLKVDALPSYQFFPGQIVAVRGTNASGLYFTVKEILSAPRLPMPSST 349
Query: 330 DVHPSMKQALDQEIH-STVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQ 388
P+ +A++Q++ S S ++++IA+GP+T DNL FEP +EL A
Sbjct: 350 ---PNQIEAINQKLGVSDDSDSSSPPLNIMIASGPYTAEDNLDFEPFQELCQKAAENMVD 406
Query: 389 LLILLGPFVDSEHPQIKKGTTD----------SSFDEIFHLEILRRLQDYVEYMGSEVRA 438
LIL GPF+D EHP + G D +S +F L I LQ + S +
Sbjct: 407 ALILTGPFLDIEHPMLASGDFDLPDIRGLDQGASMAALFRLWIAGPLQRLCSAVPS-ITV 465
Query: 439 ILVPSIRDANHDFV-LPQ---PPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
++VPS+RDA V PQ P D+ P Q+T L NP N++ +G + D+L
Sbjct: 466 LIVPSVRDAISKHVSWPQERPPRKDLALP---KQVTMLPNPCYVSLNEVVIGISSQDILY 522
Query: 495 QLSGEEMSRCSKDGTSND---RMEIYSLDISLMGPAFFFYPLYPP-------------AE 538
+LS E++S G +D R+ + +D F+PL+PP A
Sbjct: 523 ELSREQLSH----GAGSDLLTRLPSFLID------QRHFFPLFPPMSRDKLSSNGVVKAT 572
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
G LD + ++ PD+++LPS + IKV+ + +NPG+L+K
Sbjct: 573 GACLDVGYLKLGEWMAVKPDVLVLPSILTPSIKVVD-----------GVMIINPGQLSKR 621
Query: 599 EGSGTFAEI 607
+ +GT++++
Sbjct: 622 KAAGTYSQM 630
>gi|367025023|ref|XP_003661796.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
gi|347009064|gb|AEO56551.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
Length = 658
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 206/443 (46%), Gaps = 69/443 (15%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSV 274
L+ RI + A ++ EE + ASQ T + AVG I D +G LN S++L++S
Sbjct: 219 LDVRIEEFAAEVMRHHKLEELAFGSPASQSTAEIIAVGRIASDSLEGKLNAASLVLETSR 278
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL------PVDAV 328
G RV L+L KL + FPGQ+V + G N SG +++ +IPL P DA+
Sbjct: 279 RMGNGLRVPLNLGKLKAYQFFPGQIVALRGINSSGREFTVHEVL-EIPLLPSAASPPDAL 337
Query: 329 VDVHPSMK---QALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
++ A+D + T+ ++++ A+GP+T DNL FEPL L S A
Sbjct: 338 ASHLARLRGGPDAMDSDETPTL------PLTVLFASGPYTADDNLDFEPLHTLCSEAADT 391
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTD----SSFD-------EIFHLEILRRLQDYVEYMGS 434
++L GPF+D EHP I G D +S+D +F I + V S
Sbjct: 392 FVDAVVLTGPFIDVEHPLIATGDFDLPAEASYDPDAATMTTVFKYLISPAINRLVAANPS 451
Query: 435 EVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
V ILVPS+RD V PQ F + + + + NP T N++ +G + D L
Sbjct: 452 -VTVILVPSVRDVLDKHVSWPQDAFPRRELGLHKSVKIVGNPMTLRMNEMVLGVSSQDAL 510
Query: 494 KQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE--------------- 538
+L EE+ ++ + R+ Y ++ F+PL+PPA+
Sbjct: 511 WELRSEELVGGARAADALSRVSRYLVEQR------HFFPLFPPADRRRLPKTGAADAAGG 564
Query: 539 ----GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGR 594
G LD S + I PD++++PS + F KV+ + + +NPG
Sbjct: 565 GLPPGAMLDVSYLKLGEMIDVRPDVLVVPSALPPFAKVV-----------ESVLVINPGY 613
Query: 595 LAKGEGSGTFAEI-YYHGSPEMM 616
L+K + +GT+A++ Y SPE M
Sbjct: 614 LSKRKAAGTYAKMTLYPPSPEDM 636
>gi|390603438|gb|EIN12830.1| DNA polymerase alpha subunit B [Punctularia strigosozonata
HHB-11173 SS5]
Length = 580
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 198/420 (47%), Gaps = 53/420 (12%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD------ 258
R+MY++ +R N L+N+I A + S E DP+ S T VG I D
Sbjct: 153 RYMYEKVLERGNVLDNKIDDFAELVQSQYNIAELGDPSDTSGETT-VVGRIVLDFESGST 211
Query: 259 GDGHLNDKSVLLQSSVEHSGGQRVRLD----------LHKLGEFSLFPGQVVGIEGSNPS 308
G +N+ S++L+SS G RV L + G LFPG +V + G+N
Sbjct: 212 GGVKINEASLVLESSRLMGSGARVPLRFEPNVKIRGFVKGAGGAGLFPGALVALRGTNGG 271
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G S+++ PLP S K ++ E + + SM +A+GPFT+
Sbjct: 272 GGSFTVSEILANPPLP--------SSRKVSVKTEAGAN------DGFSMAVASGPFTSDA 317
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
+L ++P + L+ K +P +++L GPFVD HP+I+ G D S ++F + L+++
Sbjct: 318 DLKYKPWRTLLDALKLSKPAVVLLNGPFVDLSHPRIQDGDIDESPAQLFARVFVEPLREF 377
Query: 429 VEYMGSEVRAILVPSIRDANHDF-VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGC 487
++ + A+LVPS+RD D V PQ +I L NP F N + G
Sbjct: 378 LDSSPGSI-ALLVPSVRDMVSDHAVFPQAELSSH-LSTDSRIRLLPNPCRFSINGVSFGT 435
Query: 488 CTVDVLKQLSGEE-MSRCSKD----GTSNDRMEIYSLDISLMGPAFFFYPLYPP----AE 538
+VDVL L EE + RC+++ G S + +L L+ FYP++P A
Sbjct: 436 TSVDVLFHLRKEEFLKRCAEEVDPIGESGANDAMANLCRHLLHQR-SFYPIFPVPFDMAH 494
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
+ LD S + + PD++I+PS +K+F KVL+ G VNP ++KG
Sbjct: 495 EVNLDVSHSALLEIKDSAPDVLIVPSRLKHFSKVLAEAG---------VTAVNPAFVSKG 545
>gi|119478574|ref|XP_001259389.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
gi|119407543|gb|EAW17492.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
Length = 664
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 187/399 (46%), Gaps = 55/399 (13%)
Query: 242 TVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVV 300
+ S + AVG I D +G LN S++L++S G RV L+L + + FPGQ+V
Sbjct: 262 AIQSTSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGLRVPLNLDSVPSANFFPGQIV 321
Query: 301 GIEGSNPSGHCLIASKLVDQIPLPVDAVVDV-HPSMKQALDQEIHSTVVISRPEEISMII 359
++G N SG+ +++ LP A V S+ Q L++ P ++++I
Sbjct: 322 ALKGINASGNYFSVKEVLPPPLLPPAASSPVTMDSINQRLEEA-------GSPSPLNVLI 374
Query: 360 AAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--------- 410
A+GP+T DNL FEPL E+ A L+L+GPF+D EHP + G D
Sbjct: 375 ASGPYTADDNLAFEPLHEICQKAAETYADSLVLMGPFLDIEHPLLASGDFDLPNMKGFDP 434
Query: 411 --SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIH 467
++ +F I LQ V + S + +++PS+RDA V PQ + +
Sbjct: 435 DTATLATVFRHCITAPLQKLVAAVPS-ITIVMIPSVRDALSKHVSWPQEQLPKKELGLPK 493
Query: 468 QITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGP 526
Q+ ++NP T N+ +G C+ DVL L EE+ K+G+ R+ Y ++
Sbjct: 494 QVRMVSNPVTLSFNETVIGMCSYDVLYDLRREEVLHGKPKEGSLLTRLPKYLIE------ 547
Query: 527 AFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
F P++PP A G LD S ++ + PD++I PS + F+K
Sbjct: 548 QRHFLPMFPPSSRENLPKPATENGVATGAMLDLSYSKLGEWWNVRPDVLITPSLLPPFVK 607
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ + +NPG L+K +GT+A++ H
Sbjct: 608 VVD-----------SVLVINPGTLSKRRAAGTYAQMAIH 635
>gi|198451445|ref|XP_001358373.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
gi|198131493|gb|EAL27512.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
Length = 609
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 161/656 (24%), Positives = 281/656 (42%), Gaps = 123/656 (18%)
Query: 1 MEEEIKAEFQKNGFNFVDEGE-VLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDES-- 56
M+ EIK +F + G V+ E VL KC+ I Y+++ ++ V W + L+ E
Sbjct: 1 MDTEIKQQFDEIG---VEPSEAVLDKCMELAITYSIEDATEFVEQWMAFSLSHLHGEDPT 57
Query: 57 ------------TVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDED-EN 103
+K D++ GF Q A + SL Y + D + D E+
Sbjct: 58 PENLGEFERKVLQLKKDKV-GFKTSTQKTYSPAPVVAPSSLSTYGVIEDDPMTYDYGIES 116
Query: 104 IAEDILGTPPDNLK------------LYSDALDSTYKANANGYSSDKPSKLVTPFGRRTE 151
+ + + P + K L+S A + A + + T GR +
Sbjct: 117 LTDSSMMHTPKSKKDPSRSSALKGGVLFSPASYTPQSAKRTPAAGTRTPSTTTVAGRPGD 176
Query: 152 KLVVKFNINNL--PNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYD 209
+V F L T +EH + +R+ ++ L + G +M D
Sbjct: 177 -IVDTFGHPKLLAGTTWQAKLEHSLP-----VSQRL-LHQEAPLTLSNLG------YMND 223
Query: 210 RTEDRFNALENRIRKHANALVSSGLYEE--------PTD-PTVASQRTLFAVGMICCDGD 260
D+ + L +R+ + ALV L E P D T+ + L+AVGMI + D
Sbjct: 224 LLSDKCDNLYDRLEETGRALVEKKLGVEGAAECSWYPQDGQTLQALHMLYAVGMIHSEDD 283
Query: 261 GHLNDKSVLLQSSVEHSGGQRVRLDLH--KLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
G L+ S L + G + LDL+ ++ S+FPGQVV +G P G+ +
Sbjct: 284 GPLDAHSAFLAVT---DGEESSFLDLNFTRIKSASIFPGQVVLAKGFIPKGNSFVV---- 336
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP------EEISMIIAAGPFTTTDNLYF 372
+EIH+ ++ P E+ ++AAGP+T + +L++
Sbjct: 337 ----------------------EEIHTERKLTPPSPLKVDRELQFVVAAGPYTHSTDLFY 374
Query: 373 EPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYM 432
+PL +L+ Y K +P +L+L+GPFVD++H + + +FD F + + ++ +
Sbjct: 375 DPLHDLLKYLKDHRPDVLVLVGPFVDADHKLVAE--MAETFDSFFE----KMISGIMDVV 428
Query: 433 GSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDV 492
G +++ S +DA V P PP ++ + L +P + + I +G + DV
Sbjct: 429 GGHTTVLMISSQKDAMSHTVYPTPPPALR--KTYPNLHLLPDPSMVDLDGITLGVTSTDV 486
Query: 493 LKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEAL 551
+ L E + + +RM + G FYP+YPP E + D LA +
Sbjct: 487 VDHLLSHEFA-----ANAGERMHRAINHLFNQGS---FYPMYPPGDENMSYDTQLALKYA 538
Query: 552 TISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+ +P++++LP D ++FI+++S C+ +NPGRL+ +G GTFA
Sbjct: 539 QLRQLPNVLLLPGDQRHFIRLVS-----------DCLVINPGRLSDKKG-GTFARF 582
>gi|449549021|gb|EMD39987.1| hypothetical protein CERSUDRAFT_103890 [Ceriporiopsis subvermispora
B]
Length = 589
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 163/669 (24%), Positives = 263/669 (39%), Gaps = 163/669 (24%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
E ++ E ++ N +++ +L +C+ FC YNL DL+ W
Sbjct: 6 EARLRKEIVQHFGNTIEDA-LLPECVKFCQMYNLGGQDLLFKW----------------- 47
Query: 62 EMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSD 121
EA+ + L ++++ + P K+ D
Sbjct: 48 --------------EALTYGQLGLKVFNATTL------------------PALKAKIQRD 75
Query: 122 ALDSTYKANANGYSSDKPSKLVTPFGRR---TEKLVVKFNINNLPNTENGCIEHDDENTE 178
A A AN + L P RR T + + + + + + D T
Sbjct: 76 A------AKANAKKQQSKATLSGPLNRRFGGTGRPGARMGLGAMGLPQQPTVRRQDGFT- 128
Query: 179 DDIIKRIKTGKKCSLMVHG------SGPE--------PGCRFMYDRTEDRFNALENRIRK 224
T ++ S+ V G +GPE R+M+++ +R AL++RI
Sbjct: 129 -------FTMEERSMPVAGPSRVRFAGPEMDEQSRKRRAYRYMFEKISERSEALDDRIDD 181
Query: 225 HANALVSSGLYEEPTDPTVASQRTLFAVGMICCD-----GDGHLNDKSVLLQSSVEHSGG 279
+ + EE DP V+++ + VG + D G LN+ S+ +SS G
Sbjct: 182 FGELVKAHYNLEELGDPAVSTEEDVVVVGRVTFDSESISGSVKLNEASLAFESSRMMGAG 241
Query: 280 QRV--RLDLH--------KLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
RV R D + L LFPG +V ++G N G +A++++ P PV
Sbjct: 242 ARVPIRFDPNVKIRGGKAGLSTVGLFPGAIVALKGKNGGGGYFLATEIISLPPAPV---- 297
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
P +E S+ V IA GPFT +L + P ++S K +P +
Sbjct: 298 ---PPRTSVKSEEGQSSFVAH--------IACGPFTPDSDLQYAPWHNMLSRIKSDKPAV 346
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANH 449
++L+GPFVDS HP IK G D++ E+F + L+D+++ + ++VPS RD
Sbjct: 347 ILLVGPFVDSAHPLIKIGDVDATPAEMFQQHFVEPLRDFLDTAPGSI-VLIVPSTRDIIS 405
Query: 450 DF-VLPQPP----FDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC 504
D V PQP F P +I L NP F N + G +VDV+ L EE +
Sbjct: 406 DHAVFPQPELSADFSGDP-----RIKLLPNPARFAINDVSFGVSSVDVVFHLRKEEFLKR 460
Query: 505 SK--DGTSNDRMEIYSLDISLMGPAFF------FYPLYPPAEGIPLDFS----------- 545
+ D + +E + ++ FYP++P +PLD S
Sbjct: 461 GQEVDPVPAEVIEGQAAADPMVNSCRHLLQQRSFYPIFP----VPLDLSHEVNLDVAHWA 516
Query: 546 ---LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSG 602
L + T PD++I PS +K+F KV+ V +NP K G
Sbjct: 517 GLRLGGDGAEEDTAPDVLITPSRLKHFSKVVD-----------GTVAINPSYSTK----G 561
Query: 603 TFAEIYYHG 611
FA + Y G
Sbjct: 562 MFATLNYSG 570
>gi|402081810|gb|EJT76955.1| DNA polymerase subunit alpha B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 674
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 198/435 (45%), Gaps = 50/435 (11%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSV 274
L++RI A ++ EE + A Q + VG + D +G LN S++L++S
Sbjct: 231 LDDRIEDFAQLVMEHHKLEESAFGSAADQSPTEIICVGRVASDVTEGKLNAASLVLETSR 290
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP-----VDAVV 329
GG RV L+L +L + LFPGQ+V + G+NPSG +++++ +P +A+
Sbjct: 291 RGGGGLRVPLNLQRLPGYQLFPGQIVAVRGTNPSGKEFAVAEMLEMPLMPNAASTREALA 350
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
+ H ++ A + S P ++++ A+GP+T DNL FEPL L A
Sbjct: 351 EHHQRLRAAGSDAMDSDDGGGDPMPLNVMFASGPYTADDNLDFEPLHALCERAADTYADA 410
Query: 390 LILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRA 438
L+L GPF+D +HP + G D ++ +F + L V V
Sbjct: 411 LVLNGPFIDIDHPLVASGDFDLPDDASVDPDAATLSTLFRYLVSPALARLVA-ANPHVAV 469
Query: 439 ILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
ILVPS+RDA V PQ F + + + NP T N+ VG + DVL +L
Sbjct: 470 ILVPSVRDAVAKHVSWPQEGFARKELGLPKSARVVGNPMTLSINEALVGVSSQDVLYELG 529
Query: 498 GEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEGIPL 542
++ + + + +SL + ++P++PP A G L
Sbjct: 530 NAALAGGRQP-GGGGQQDKFSLLSRHVIEQRHYFPVFPPLDRKRLPRTGTAEGLATGAVL 588
Query: 543 DFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSG 602
D S + ++ PD+++LPS + F +V+ + + +NPG L+K G G
Sbjct: 589 DVSYLKLGDMVNVRPDVLVLPSALPPFARVV-----------ESVLVINPGYLSKRRGPG 637
Query: 603 TFAE--IYYHGSPEM 615
T+A +Y H + E+
Sbjct: 638 TYARMTLYPHSAAEL 652
>gi|320591675|gb|EFX04114.1| DNA polymerase alpha primase associated subunit [Grosmannia
clavigera kw1407]
Length = 690
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 162/671 (24%), Positives = 278/671 (41%), Gaps = 112/671 (16%)
Query: 19 EGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAI 78
E +V+ + + + L +L WE Y + L+ + + + + F LQ+ +
Sbjct: 21 EPDVVMQLQSIMKMHGLPVQELFYKWEAYCIKMDLEAAAMSMERLRAFKQDLQDALERRN 80
Query: 79 IKEEPSLHIYSSKDVDMI-LNDEDENIAE-----DILG--TPPDNLKLYSDALDSTYKAN 130
+++PSL ++ ++ L N A+ D+L P + K + + S K+
Sbjct: 81 QEQQPSLSVHKKPKSEVRRLAATQRNAAKQGGVFDMLDGLVPGTSAKTGGNNVGSGKKST 140
Query: 131 AN---------GYSSD--KPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTED 179
+ G S D PSKL G FN D +N D
Sbjct: 141 PSVSRVKSEYMGSSPDHKTPSKLADQLGAMGAIAPSSFN--------------DRQNAGD 186
Query: 180 --DIIKR--------IKTGKKCSLMVHGSGPEP--GCRFMYDRTEDRFNALENRIRKHAN 227
+I+ R I + + + G+ + G + M + + L++RI +
Sbjct: 187 VIEILNRQLPAAERPIAPYAEPRVKLTGASDQKKLGYKPMAMKLSEASEILDDRIDEFTK 246
Query: 228 ALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRL 284
++ ++ ASQ T + AVG I D G LN S +L++S GG RV L
Sbjct: 247 LVLDHHKLDDDEIGNAASQGTAEIVAVGRIASDSASGKLNAASAVLETSRRRGGGLRVPL 306
Query: 285 DLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQ------- 337
DL +L F FPGQ+V + G+N SGH S+++ ++PL +A + M
Sbjct: 307 DLGRLKGFQFFPGQIVALRGTNSSGHAFAVSQVL-ELPLLPNAASSLTALMGHREKMRGH 365
Query: 338 --------ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
+ ++ + +++I A+GP+T DNL FEPL L S A
Sbjct: 366 GGGDGDEDDMMDVDGNSNTQNALAPLNIIYASGPYTADDNLDFEPLHALCSKAADTGVDA 425
Query: 390 LILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRA 438
++L GPF+D++HP I G D ++ +F + LQ + V
Sbjct: 426 VVLAGPFLDADHPLIATGDFDLPEDAVVEPDAATMATVFRYLVAPALQQ-LTTANPAVMV 484
Query: 439 ILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
+LVPS+RD + PQ F + + + + NP T N++ +G + DVL +L
Sbjct: 485 LLVPSVRDVLDRHVSWPQDAFSRRDLGLPKAVRIVGNPMTLSINEMVLGVSSQDVLYELR 544
Query: 498 GEEMSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP-----------------AEG 539
EE+S D + R Y L+ ++PL+PP A G
Sbjct: 545 HEELSGGRLADANAMSRACRYLLEQR------HYFPLFPPVDRRSLPRTGVADTDFVATG 598
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
LD S + ++ PD++++PS + F +V+ + + +NPG L+K
Sbjct: 599 AMLDTSYLKLGEMVNVRPDVLVVPSALPPFARVV-----------ESVLVINPGYLSKRR 647
Query: 600 GSGTFAEIYYH 610
G+GT+A + +
Sbjct: 648 GAGTYARMTLY 658
>gi|256083451|ref|XP_002577957.1| transforming growth factor-beta receptor type I [Schistosoma
mansoni]
gi|353230170|emb|CCD76341.1| putative transforming growth factor-beta receptor type I
[Schistosoma mansoni]
Length = 620
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 188/362 (51%), Gaps = 54/362 (14%)
Query: 262 HLNDKSVLLQSSVEHSGGQR--VRLDL---HKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
H ++ +++ VE SG + V LDL L +S++ GQ + I G NP+GH L A +
Sbjct: 262 HASNVALVGLRRVERSGSETDAVPLDLGFSKDLSCYSIYSGQPLLIRGVNPTGHSLGAME 321
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
+ QIP+ ++ +H +++A GP+T +++ L
Sbjct: 322 IF-QIPISKPPFIN-----PDKCSGNLH------------IMVACGPYTLSNSHDPTGLF 363
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
L+ K+ +P +LILLGPFVDSEHP I + ++++++E+F + + ++ ++ +
Sbjct: 364 NLLRCVKQCKPHVLILLGPFVDSEHPGI-QSYSETTYEELFQSRV-NSVSEWCSHLS--I 419
Query: 437 RAILVPSIRDANHDFVLPQPPFDIQ-----PPDIIHQITSLTNPGTFEANQIKVGCCTVD 491
R I++ S R+ +HD V P PP D P +IH +P F+ + G +VD
Sbjct: 420 RLIIISSWRELHHDPVYPTPPIDKSWIEKTPHLVIH---FAPDPCLFQIGEYVFGLTSVD 476
Query: 492 VLKQLSGEEMSR-CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEA 550
+LK LS EE+S CS +DR I L ++ + FYP++PP +G+PLD+ L +
Sbjct: 477 ILKDLSCEEISAGCS----GSDR--ITRLCRHILASS-SFYPVHPPDDGLPLDYPLWSQY 529
Query: 551 LTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
S P +ILPS ++ F+K + +C+NPG +++GE G++AEI +
Sbjct: 530 AQFSVTPHCLILPSKLRQFVKNV-----------DGVLCINPGYVSRGEAFGSYAEIVVN 578
Query: 611 GS 612
G+
Sbjct: 579 GN 580
>gi|67541370|ref|XP_664459.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
gi|40739064|gb|EAA58254.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
Length = 905
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 188/396 (47%), Gaps = 52/396 (13%)
Query: 242 TVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVV 300
V S + AVG I D +G LN S++L++S G+RV L++ + + FPGQ+V
Sbjct: 506 AVQSTNEIVAVGRIASDSPEGKLNPASLVLETSRRSGAGRRVPLNVDSIPSVNFFPGQIV 565
Query: 301 GIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIA 360
+ G N SG+ + K V PL AV V P+++ ++ S P ++++IA
Sbjct: 566 ALLGINASGNYF-SVKEVLPPPLLPPAVSSV-PTIESTNERLSEGG---SSP--LNVMIA 618
Query: 361 AGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD---------S 411
GP+T DNL FEPLKE+ A LILLGPF+D EHP + G + +
Sbjct: 619 CGPYTADDNLDFEPLKEICHKAAEGYADGLILLGPFLDLEHPLLASGDFELPESIDPDTA 678
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQIT 470
+ +F I LQ + S + LVPS+RDA V PQ + + Q
Sbjct: 679 TLTTVFKHYISTPLQQLAAAVPS-ITIALVPSVRDAVSKHVSWPQEQLPKKELGLPKQAR 737
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPAFF 529
++NP TF N+ +G C+ DVL +L EE + K+G R+ Y ++
Sbjct: 738 MVSNPVTFSLNETVIGMCSHDVLYELRREEALHGKPKEGNLLTRLVKYLIE------QRH 791
Query: 530 FYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLS 574
F P++PP A G LD S ++ + PDI+I+PS + F+KV+
Sbjct: 792 FLPIFPPSSRDALPRPGFEGGLATGAALDVSYSKLGEWWNVRPDILIVPSMLPPFVKVVD 851
Query: 575 LGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ +NPG L+K +GTFA++ H
Sbjct: 852 -----------SILTINPGTLSKRRAAGTFAQMAIH 876
>gi|169779341|ref|XP_001824135.1| DNA polymerase alpha/primase associated subunit [Aspergillus oryzae
RIB40]
gi|83772874|dbj|BAE63002.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 651
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 187/402 (46%), Gaps = 60/402 (14%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S G RV L + L + FPGQ
Sbjct: 248 SAATQSTSEIVAVGRIASDSMEGKLNPASLVLETSRRTGAGVRVPLKVDTLPSVNFFPGQ 307
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPL--PVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
+V + G N SG+ + K V PL P + V + + L++ S ++
Sbjct: 308 IVALRGINASGNYF-SVKEVLSTPLLPPAASSVPTMEGINERLEEAGSSP--------LN 358
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD------ 410
++I++GP+T DNL FEPL E+ A L+L+GPF+D EHP + G D
Sbjct: 359 IMISSGPYTADDNLDFEPLNEICQKAAESYADGLVLMGPFLDIEHPLVASGDFDLPETNG 418
Query: 411 -----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPD 464
++ +F I LQ V + S + ++VPS+RDA V PQ +
Sbjct: 419 YDPDTATLTTVFRHCITTPLQRLVAAVPS-ITIVMVPSVRDAVSKHVSWPQEQLPKKELG 477
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISL 523
+ Q+ ++NP T N+ +G C+ DVL +L EE + K+G R+ Y ++
Sbjct: 478 LPKQVRMVSNPVTLSLNETVIGLCSHDVLYELRREEALHGKPKEGNLLTRLSKYLVE--- 534
Query: 524 MGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKY 568
F P++PP A G LD S + + PD++I+PS +
Sbjct: 535 ---QRHFNPVFPPSSRDALPKPGIENGLATGATLDVSYMKLGEWWNVRPDVLIVPSMLPP 591
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F+KV+ + +NPG L+K GT+A++ H
Sbjct: 592 FVKVVD-----------SVLVINPGTLSKRRAPGTYAQMAIH 622
>gi|391870358|gb|EIT79543.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Aspergillus oryzae 3.042]
Length = 651
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 187/402 (46%), Gaps = 60/402 (14%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S G RV L + L + FPGQ
Sbjct: 248 SAATQSTSEIVAVGRIASDSMEGKLNPASLVLETSRRTGAGVRVPLKVDTLPSVNFFPGQ 307
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPL--PVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
+V + G N SG+ + K V PL P + V + + L++ S ++
Sbjct: 308 IVALRGINASGNYF-SVKEVLSTPLLPPAASSVPTMEGINERLEEAGSSP--------LN 358
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD------ 410
++I++GP+T DNL FEPL E+ A L+L+GPF+D EHP + G D
Sbjct: 359 IMISSGPYTADDNLDFEPLNEICQKAAESYADGLVLMGPFLDIEHPLVASGDFDLPETNG 418
Query: 411 -----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPD 464
++ +F I LQ V + S + ++VPS+RDA V PQ +
Sbjct: 419 YDPDTATLTTVFRHCITTPLQRLVAAVPS-ITIVMVPSVRDAVSKHVSWPQEQLPKKELG 477
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISL 523
+ Q+ ++NP T N+ +G C+ DVL +L EE + K+G R+ Y ++
Sbjct: 478 LPKQVRMVSNPVTLSLNETVIGLCSHDVLYELRREEALHGKPKEGNLLTRLSKYLVE--- 534
Query: 524 MGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKY 568
F P++PP A G LD S + + PD++I+PS +
Sbjct: 535 ---QRHFNPVFPPSSRDALPKPGIENGLATGATLDVSYMKLGEWWNVRPDVLIVPSMLPP 591
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F+KV+ + +NPG L+K GT+A++ H
Sbjct: 592 FVKVVD-----------SVLVINPGTLSKRRAPGTYAQMAIH 622
>gi|70997197|ref|XP_753352.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
gi|66850988|gb|EAL91314.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
Length = 617
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 189/405 (46%), Gaps = 51/405 (12%)
Query: 243 VASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVG 301
+ S + AVG I D +G LN S++L++S G RV L+L + + FPGQ+V
Sbjct: 198 IQSTSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGLRVPLNLDSIPSANFFPGQIVA 257
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVH-PSMKQALDQEIHSTVVISRPEEISMIIA 360
+ G N SG+ +++ LP A V ++ Q L+Q P ++++IA
Sbjct: 258 LRGINASGNYFSVKEVLPPPLLPPAASSPVSVDTINQRLEQA-------GSPSPLNVLIA 310
Query: 361 AGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD---------- 410
+GP+T DNL FEPL E+ A L+L+GPF+D EHP + G D
Sbjct: 311 SGPYTADDNLAFEPLHEICQKAAETYADSLVLMGPFLDIEHPLLASGDFDLPEMEGFDPD 370
Query: 411 -SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQ 468
++ +F I LQ V + S + +++PS+RDA V PQ + + Q
Sbjct: 371 TATLATVFRHFITVPLQKLVAAVPS-ITIVMIPSVRDALSKHVSWPQEQLSKKELGLPKQ 429
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGPA 527
+ ++NP T N+ +G C+ DVL L EE+ K+G+ R+ Y ++
Sbjct: 430 VRMVSNPVTLSFNETVIGMCSYDVLYDLRREEVLHGKPKEGSLLTRLPKYLIE------Q 483
Query: 528 FFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK- 571
F P++PP A G LD S ++ + PD++I PS + F+K
Sbjct: 484 RHFLPMFPPSSRENLPKPATENGVATGAMLDLSYSKLGEWWNVRPDVLITPSLLPPFVKV 543
Query: 572 -----VLSLGGRNE-GEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
VLSL + + +NPG L+K +GT+A++ H
Sbjct: 544 FPQCLVLSLFILTSVAQVVDSVLVINPGTLSKRRAAGTYAQMAIH 588
>gi|340517616|gb|EGR47860.1| hypothetical protein TRIREDRAFT_79187 [Trichoderma reesei QM6a]
Length = 664
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 202/434 (46%), Gaps = 58/434 (13%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG-DGHLNDKSVLL 270
+DR + + +R+H N L S T AS + AVG I D +G LN S++L
Sbjct: 232 DDRIDDFIDLVREHHN-LEDSAFGNAAT----ASTTEVVAVGRIASDSLEGKLNAASIVL 286
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD-QIPLPVDAVV 329
++S G RV L L + +S FPGQ+V + GSN +G I ++++ + + +
Sbjct: 287 ETSRRTGRGLRVPLKLDAIQSWSFFPGQIVALRGSNITGDEFIVKEILEVPLLPSAASSL 346
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
+ ++ L + + S P ++++ AAGP+T DNL +EPL+ L S A
Sbjct: 347 AALEAHREKLKGDPDAMDSDSDPAPLTILYAAGPYTADDNLDYEPLQALCSQAADTYADA 406
Query: 390 LILLGPFVDSEHPQIKKGTTD----SSFD-------EIF-HL--EILRRLQDYVEYMGSE 435
L+L GPF+D +HP I G D +S+D +F HL L RL ++
Sbjct: 407 LVLTGPFLDIDHPLIATGDFDLPEEASYDPDTANMNTVFKHLVAPALNRLASANPHL--- 463
Query: 436 VRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
ILVPS+RD V PQ + + + ++NP T N++ VG + DVL
Sbjct: 464 -TVILVPSVRDVLDKHVSWPQDTIPRRELGLPKSVRIVSNPMTLSMNEVVVGLSSQDVLY 522
Query: 495 QLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEG 539
+L EE+S+ + G R+ + ++ F+P++PP A G
Sbjct: 523 ELRSEEVSKGAPAGDLMRRLSRHLIE------QRHFFPVFPPTDRSRLPRTGTEEGLATG 576
Query: 540 IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
LD S + ++ PD+++ PS + F +V+ + + +NPG L+K
Sbjct: 577 AMLDVSYLKLGEMVNVRPDVLLTPSSLPPFARVV-----------ESVLAINPGSLSKRR 625
Query: 600 GSGTFAEIYYHGSP 613
G GT+A + + P
Sbjct: 626 GPGTYARMTLYPPP 639
>gi|259480453|tpe|CBF71599.1| TPA: DNA polymerase alpha/primase associated subunit
(AFU_orthologue; AFUA_5G13020) [Aspergillus nidulans
FGSC A4]
Length = 682
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 188/396 (47%), Gaps = 52/396 (13%)
Query: 242 TVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVV 300
V S + AVG I D +G LN S++L++S G+RV L++ + + FPGQ+V
Sbjct: 283 AVQSTNEIVAVGRIASDSPEGKLNPASLVLETSRRSGAGRRVPLNVDSIPSVNFFPGQIV 342
Query: 301 GIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIA 360
+ G N SG+ + K V PL AV V P+++ ++ S P ++++IA
Sbjct: 343 ALLGINASGNYF-SVKEVLPPPLLPPAVSSV-PTIESTNERLSEGG---SSP--LNVMIA 395
Query: 361 AGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD---------S 411
GP+T DNL FEPLKE+ A LILLGPF+D EHP + G + +
Sbjct: 396 CGPYTADDNLDFEPLKEICHKAAEGYADGLILLGPFLDLEHPLLASGDFELPESIDPDTA 455
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQIT 470
+ +F I LQ + S + LVPS+RDA V PQ + + Q
Sbjct: 456 TLTTVFKHYISTPLQQLAAAVPS-ITIALVPSVRDAVSKHVSWPQEQLPKKELGLPKQAR 514
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPAFF 529
++NP TF N+ +G C+ DVL +L EE + K+G R+ Y ++
Sbjct: 515 MVSNPVTFSLNETVIGMCSHDVLYELRREEALHGKPKEGNLLTRLVKYLIE------QRH 568
Query: 530 FYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLS 574
F P++PP A G LD S ++ + PDI+I+PS + F+KV+
Sbjct: 569 FLPIFPPSSRDALPRPGFEGGLATGAALDVSYSKLGEWWNVRPDILIVPSMLPPFVKVVD 628
Query: 575 LGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ +NPG L+K +GTFA++ H
Sbjct: 629 -----------SILTINPGTLSKRRAAGTFAQMAIH 653
>gi|242083288|ref|XP_002442069.1| hypothetical protein SORBIDRAFT_08g009080 [Sorghum bicolor]
gi|241942762|gb|EES15907.1| hypothetical protein SORBIDRAFT_08g009080 [Sorghum bicolor]
Length = 157
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 103/153 (67%), Gaps = 10/153 (6%)
Query: 266 KSVLLQSSVEHSGGQRV-RLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
KS+ +V +S G V DL L FSLFPGQVVGIEG NPSGHC +ASKL+ IP+
Sbjct: 2 KSLSCYRAVFNSPGDSVCAFDLKDLDHFSLFPGQVVGIEGHNPSGHCFVASKLIYSIPVS 61
Query: 325 VDAVVDVHPSM-KQALDQEIHSTV---VISRPEEISMIIAAGPFTTTDNLYFEPLKELIS 380
VDA + PS KQA+D E + +SR E+S +I AGP+T TDNL FEPL+EL+S
Sbjct: 62 VDAQL---PSANKQAIDNESNQNSDAGTLSR--ELSSVITAGPYTRTDNLLFEPLQELLS 116
Query: 381 YAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSF 413
YA RKQPQLLIL GPF+DS+HP IK +F
Sbjct: 117 YACRKQPQLLILTGPFIDSDHPDIKMELLTRAF 149
>gi|358336737|dbj|GAA55174.1| DNA polymerase alpha subunit B [Clonorchis sinensis]
Length = 823
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 174/355 (49%), Gaps = 58/355 (16%)
Query: 270 LQSSVEHSGGQRVRLDLHKLG-EFSLFPGQVVGIEGSNPSGHCLIASKLVDQ--IPLPVD 326
+QSS+E G R+ L FSL+ GQ V + SNP+G L + L +P P
Sbjct: 486 VQSSME--GVTRLEFPLSDRSISFSLYAGQPVVVRASNPTGQLLCVTDLFSAPVVPPPEY 543
Query: 327 AVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
A S K AL S+++A GP+T + + L L+ K+ +
Sbjct: 544 A------SPKNAL----------------SVMVACGPYTLSASNDPSLLLTLLRAVKKNR 581
Query: 387 PQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD 446
P +LI++GPFVD +H ++ DS+++E+FH I + +Y ++ +V ++VPS R+
Sbjct: 582 PHVLIMIGPFVDCQHSAVQV-YRDSTYEELFHTRI-NSVAEYCSHL--DVHLVIVPSWRE 637
Query: 447 ANHDFVLPQPPFDI----QPPDIIHQITS---LTNPGTFEANQIKVGCCTVDVLKQLSGE 499
+HD V P PPFD Q P++I + +P F G +VDV LS E
Sbjct: 638 MHHDPVYPTPPFDQSWTQQTPELISAYRNAHFFWDPCLFRIGDYVFGVTSVDVPFHLSCE 697
Query: 500 EMS-RCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPD 558
E+S CS D S + S + FYP++PP++ +PLD+ L + P
Sbjct: 698 EISSNCSGDRISRLCQHLLS--------SGSFYPIHPPSDDLPLDYPLWNRRARMPVTPH 749
Query: 559 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSP 613
+I+PS ++ F+K + K +C+NPG +++G+ SG++A + H P
Sbjct: 750 CLIVPSRLRQFVK-----------DVKGVLCINPGHVSRGQSSGSYAVLTIHKEP 793
>gi|159126923|gb|EDP52039.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus A1163]
Length = 617
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 189/405 (46%), Gaps = 51/405 (12%)
Query: 243 VASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVG 301
+ S + AVG I D +G LN S++L++S G RV L+L + + FPGQ+V
Sbjct: 198 IQSTSEIIAVGRIASDSLEGKLNPASLVLETSRRTGAGLRVPLNLDSIPSANFFPGQIVA 257
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVH-PSMKQALDQEIHSTVVISRPEEISMIIA 360
+ G N SG+ +++ LP A V ++ Q L+Q P ++++IA
Sbjct: 258 LRGINASGNYFSVKEVLPPPLLPPAASSPVSVDTINQRLEQA-------GSPSPLNVLIA 310
Query: 361 AGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD---------- 410
+GP+T DNL FEPL E+ A L+L+GPF+D EHP + G D
Sbjct: 311 SGPYTADDNLAFEPLHEICQKAAETYADSLVLMGPFLDIEHPLLASGDFDLPEMEGFDPD 370
Query: 411 -SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQ 468
++ +F I LQ V + S + +++PS+RDA V PQ + + Q
Sbjct: 371 TATLATVFRHFITVPLQKLVAAVPS-ITIVMIPSVRDALSKHVSWPQEQLPKKELGLPKQ 429
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGPA 527
+ ++NP T N+ +G C+ DVL L EE+ K+G+ R+ Y ++
Sbjct: 430 VRMVSNPVTLSFNETVIGMCSYDVLYDLRREEVLHGKPKEGSLLTRLPKYLIE------Q 483
Query: 528 FFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK- 571
F P++PP A G LD S ++ + PD++I PS + F+K
Sbjct: 484 RHFLPMFPPSSRENLPKPATENGVATGAMLDLSYSKLGEWWNVRPDVLITPSLLPPFVKV 543
Query: 572 -----VLSLGGRNE-GEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
VLSL + + +NPG L+K +GT+A++ H
Sbjct: 544 FPQCLVLSLFILTSVAQVVDSVLVINPGTLSKRRAAGTYAQMAIH 588
>gi|317035177|ref|XP_001401243.2| DNA polymerase alpha/primase associated subunit [Aspergillus niger
CBS 513.88]
Length = 660
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 202/435 (46%), Gaps = 56/435 (12%)
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG- 259
G + M R + L++RI + +E T + A+Q T + AVG I D
Sbjct: 220 GYKPMAMRLAEASEILDDRIDEFMALFEKQYGSDEITFGSAATQSTSEIVAVGRIASDSM 279
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
+G LN S++L++S G RV L L + + FPGQ+V + G N SG+ ++
Sbjct: 280 EGKLNAASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRGINASGNYFSVKEV-- 337
Query: 320 QIPLPVDAVVDVHPSMKQALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
+P P+ + P+ ++ E I+ + + P +++++AAGP+T DNL +EPLKE+
Sbjct: 338 -LPTPL-----LPPAASSVVNLETINQRLEDAGPAPLNILVAAGPYTADDNLDYEPLKEI 391
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQD 427
A L+LLGPF+D EHP + G D + +F I LQ
Sbjct: 392 CRKAADSYADGLVLLGPFLDIEHPLLASGDFDLPEINGVDPDTVTLTTVFRHCISAPLQR 451
Query: 428 YVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVG 486
V + S V +LVPS+RDA V PQ + + Q+ ++NP T N+ +G
Sbjct: 452 LVAAVPS-VTIVLVPSVRDAVSKHVSWPQEQLPKKELGLPKQVRMVSNPVTLSLNETVIG 510
Query: 487 CCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP--------- 536
C+ DVL +L EE+ +G R+ Y ++ F P++P
Sbjct: 511 MCSHDVLYELRREEVLHGKPTEGNLLTRLPKYMIE------QRHFQPMFPTSSRDMLPRA 564
Query: 537 ----AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
A G +D S ++ + PD++I PS + F+KV+ +NP
Sbjct: 565 GTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVVD-----------SVTVINP 613
Query: 593 GRLAKGEGSGTFAEI 607
G L+K G+GT+A++
Sbjct: 614 GTLSKRRGAGTYAQM 628
>gi|350639647|gb|EHA28001.1| DNA polymerase [Aspergillus niger ATCC 1015]
Length = 650
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 202/435 (46%), Gaps = 56/435 (12%)
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG- 259
G + M R + L++RI + +E T + A+Q T + AVG I D
Sbjct: 210 GYKPMAMRLAEASEILDDRIDEFMALFEKQYGSDEITFGSAATQSTSEIVAVGRIASDSM 269
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
+G LN S++L++S G RV L L + + FPGQ+V + G N SG+ ++
Sbjct: 270 EGKLNAASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRGINASGNYFSVKEV-- 327
Query: 320 QIPLPVDAVVDVHPSMKQALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
+P P+ + P+ ++ E I+ + + P +++++AAGP+T DNL +EPLKE+
Sbjct: 328 -LPTPL-----LPPAASSVVNLETINQRLEDAGPAPLNILVAAGPYTADDNLDYEPLKEI 381
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQD 427
A L+LLGPF+D EHP + G D + +F I LQ
Sbjct: 382 CRKAADSYADGLVLLGPFLDIEHPLLASGDFDLPEINGVDPDTVTLTTVFRHCISAPLQR 441
Query: 428 YVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVG 486
V + S V +LVPS+RDA V PQ + + Q+ ++NP T N+ +G
Sbjct: 442 LVAAVPS-VTIVLVPSVRDAVSKHVSWPQEQLPKKELGLPKQVRMVSNPVTLSLNETVIG 500
Query: 487 CCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP--------- 536
C+ DVL +L EE+ +G R+ Y ++ F P++P
Sbjct: 501 MCSHDVLYELRREEVLHGKPTEGNLLTRLPKYMIE------QRHFQPMFPTSSRDMLPRA 554
Query: 537 ----AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
A G +D S ++ + PD++I PS + F+KV+ +NP
Sbjct: 555 GTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVVD-----------SVTVINP 603
Query: 593 GRLAKGEGSGTFAEI 607
G L+K G+GT+A++
Sbjct: 604 GTLSKRRGAGTYAQM 618
>gi|134081927|emb|CAK97193.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 202/435 (46%), Gaps = 56/435 (12%)
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG- 259
G + M R + L++RI + +E T + A+Q T + AVG I D
Sbjct: 159 GYKPMAMRLAEASEILDDRIDEFMALFEKQYGSDEITFGSAATQSTSEIVAVGRIASDSM 218
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
+G LN S++L++S G RV L L + + FPGQ+V + G N SG+ ++
Sbjct: 219 EGKLNAASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRGINASGNYFSVKEV-- 276
Query: 320 QIPLPVDAVVDVHPSMKQALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
+P P+ + P+ ++ E I+ + + P +++++AAGP+T DNL +EPLKE+
Sbjct: 277 -LPTPL-----LPPAASSVVNLETINQRLEDAGPAPLNILVAAGPYTADDNLDYEPLKEI 330
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQD 427
A L+LLGPF+D EHP + G D + +F I LQ
Sbjct: 331 CRKAADSYADGLVLLGPFLDIEHPLLASGDFDLPEINGVDPDTVTLTTVFRHCISAPLQR 390
Query: 428 YVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVG 486
V + S V +LVPS+RDA V PQ + + Q+ ++NP T N+ +G
Sbjct: 391 LVAAVPS-VTIVLVPSVRDAVSKHVSWPQEQLPKKELGLPKQVRMVSNPVTLSLNETVIG 449
Query: 487 CCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP--------- 536
C+ DVL +L EE+ +G R+ Y ++ F P++P
Sbjct: 450 MCSHDVLYELRREEVLHGKPTEGNLLTRLPKYMIE------QRHFQPMFPTSSRDMLPRA 503
Query: 537 ----AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
A G +D S ++ + PD++I PS + F+KV+ +NP
Sbjct: 504 GTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVVD-----------SVTVINP 552
Query: 593 GRLAKGEGSGTFAEI 607
G L+K G+GT+A++
Sbjct: 553 GTLSKRRGAGTYAQM 567
>gi|407923832|gb|EKG16895.1| DNA polymerase alpha/epsilon subunit B [Macrophomina phaseolina
MS6]
Length = 681
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 183/418 (43%), Gaps = 70/418 (16%)
Query: 240 DPTVASQRTLFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+P S + AVG I D +G LN S++L++S G RV L + L ++ FPGQ
Sbjct: 251 NPASQSTSDIVAVGRIASDSAEGRLNAASLVLETSRRTGAGLRVPLKVENLPLYNFFPGQ 310
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQAL-----DQEIHSTVVISRPE 353
+V + GSNP+G + ++++ LPV A + A D +I + +RP
Sbjct: 311 IVALRGSNPAGSFFMVKEILEMPLLPVAASTPSELDLANARLASTGDMDIDDSESSTRP- 369
Query: 354 EISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--- 410
+S ++A+GP+T L F L L+ A +P LL+L GPF+D EHP + G D
Sbjct: 370 -LSFMVASGPYTPGHVLDFAALNALMENALESRPDLLVLSGPFLDIEHPSVINGDFDIPE 428
Query: 411 --------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQ 461
++ ++F I + + S + I+ PS+RDA N PQ Q
Sbjct: 429 SAIPNPDKATLKDVFRYHISQPINQLAAQHPS-ITIIIQPSVRDAINKHVSYPQDRLKRQ 487
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTS-NDRMEIYSLD 520
+ Q + +TNP T N+I VG ++DVL L EE C D + M + +
Sbjct: 488 EFGLPRQASIVTNPVTISINEIIVGINSLDVLDMLRREE---CVSDKARMTNAMARWGAN 544
Query: 521 ISLMGPAFFFYPLYPPAE-------------------------------GIPLDFSLAQE 549
I F P++PP G PLD S +
Sbjct: 545 IISQRS---FCPVFPPTAREAYPKIEADRDIAVAAEGGEGAEKLDLLPIGAPLDTSFLKL 601
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++ PD++I PS + F KV++ + +NPG L+K G GTFA +
Sbjct: 602 TEWLNVRPDLLITPSALTPFAKVIN-----------SVLMINPGTLSKKRGPGTFARM 648
>gi|238499981|ref|XP_002381225.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
gi|220692978|gb|EED49324.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
Length = 651
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 187/402 (46%), Gaps = 60/402 (14%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S G RV L + L + FPGQ
Sbjct: 248 SAATQSTSEIVAVGRIASDSMEGKLNPASLVLETSRRTGAGMRVPLKVDTLPSVNFFPGQ 307
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPL--PVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
+V + G N SG+ + K V PL P + V + + L++ S ++
Sbjct: 308 IVALRGINASGNYF-SVKEVLSTPLLPPAASSVPTMEGINERLEEAGSSP--------LN 358
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD------ 410
++I++GP+T DNL FEPL ++ A L+L+GPF+D EHP + G D
Sbjct: 359 IMISSGPYTADDNLDFEPLNKICQKAAESYADGLVLMGPFLDIEHPLVASGDFDLPETNG 418
Query: 411 -----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPD 464
++ +F I LQ V + S + ++VPS+RDA V PQ +
Sbjct: 419 YDPDTATLTTVFRHCITTPLQRLVAAVPS-ITIVMVPSVRDAVSKHVSWPQEQLPKKELG 477
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISL 523
+ Q+ ++NP T N+ +G C+ DVL +L EE + K+G R+ Y ++
Sbjct: 478 LPKQVRMVSNPVTLSLNETVIGLCSHDVLYELRREEALHGKPKEGNLLTRLSKYLVE--- 534
Query: 524 MGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKY 568
F P++PP A G LD S + + PD++I+PS +
Sbjct: 535 ---QRHFNPVFPPSSRDALPKPGIENGLATGATLDVSYMKLGEWWNVRPDVLIVPSMLPP 591
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F+KV+ + +NPG L+K GT+A++ H
Sbjct: 592 FVKVVD-----------SVLVINPGTLSKRRAPGTYAQMAIH 622
>gi|365982203|ref|XP_003667935.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
gi|343766701|emb|CCD22692.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
Length = 705
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 190/404 (47%), Gaps = 69/404 (17%)
Query: 239 TDPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
+DPT+ SQ ++ VG I D +G LN +S+ L++S G+RVRLDL + E SLF
Sbjct: 298 SDPTIQSQSEIYTVGRIVPDSPTFEGRLNTESIALETSRILGIGRRVRLDLSNIKELSLF 357
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQI-PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
GQ+VG+ G N + LVD+I LP +P + ++EI E
Sbjct: 358 CGQIVGLRGKNANNENF----LVDEILSLP-------YPDAPVSTEEEIKGFQENFNNET 406
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDS-- 411
+ +I+ +GP+ + N+ PL + + + +P ++I+ GPF+D +P I G+ +
Sbjct: 407 MKVIVTSGPYFSETNIDMTPLIDFVDKINNQVKPHVVIMFGPFIDLTNPLISSGSIPTFP 466
Query: 412 -------SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPP 463
+ DE+F + + ++ + S+++ IL+P RDA + PQ FD +
Sbjct: 467 NLKIQPKTLDELF----TKVMTPILKTINSQIQVILIPCTRDALSQHASYPQDSFDRKQL 522
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDI 521
+ TNP TF+ N+ GC VD+ K L +E+++ + + N DR+ + L
Sbjct: 523 QLPKNFKCFTNPSTFQLNETFFGCSNVDIFKDL--KEVTKGGETSSRNRFDRISEHILQQ 580
Query: 522 SLMGPAFFFYPLYPPA----------------EGIPLDFS-LAQEALTISTIPDIIILPS 564
+YP++P G L+ L + PD++I PS
Sbjct: 581 RR------YYPIFPGGTRNVKIDKEKKIFKHIAGADLEVPYLGLTEFVGNVTPDVMIFPS 634
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE-GSGTFAEI 607
+M F +V+ + + +NPGR K + G GTFA+I
Sbjct: 635 EMPRFARVI-----------QNVIMINPGRFIKQKGGKGTFAQI 667
>gi|401884944|gb|EJT49076.1| alpha DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 495
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 200/441 (45%), Gaps = 52/441 (11%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICC--DGDGH 262
R+M+++ R AL+ +I A ++ + E DP V ++ + VG I
Sbjct: 54 RYMFEKMSARSEALDEQIDTFAFTIMDAYGLTELGDPHVPAEDATYTVGRILSPPTDSNK 113
Query: 263 LNDKSVLLQSSVEHSGGQ----------RVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCL 312
S+ LQSS + GG +VR + F LFPG +V ++G N G
Sbjct: 114 ATVGSLYLQSSRQFGGGNIVPLRFSPDVKVRGGAPGVRGFGLFPGCLVCVKGRNGGGDAY 173
Query: 313 IASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMII--AAGPFTTTDNL 370
+A D++ +P + + +L EI R + M I AGP+T +NL
Sbjct: 174 VA----DEVLMPPAQI------LPSSLPDEIVQYQQGERLGGLPMSIYSCAGPYTLDNNL 223
Query: 371 YFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
+EPL L+ ++P +I+LGPFVD+ HP I G + E+F +I RL E
Sbjct: 224 EYEPLDALVDVVCDERPDAVIMLGPFVDAHHPAIASGALRQTPVELFRQQIASRLARINE 283
Query: 431 YMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCT 489
V IL+PS+RD + PQ + + ++ L NP TF N++ + +
Sbjct: 284 ESPGTV-VILIPSVRDLLSRHAAFPQAMLERDGLGLSKRVKVLPNPCTFSLNEVVISTSS 342
Query: 490 VDVLKQLSGEEMSRCSKDGTSNDRMEI---------YSLDISLMGPAFFFYPLYPPAEGI 540
VD L L EE+ + +++ + + +L ++G FYPL+P E +
Sbjct: 343 VDTLFHLRREELFQRAEEAEPDPSTPVNRNPQGDAMANLVRHVLG-QRSFYPLFPAPEAL 401
Query: 541 P----LDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLA 596
LD + + T PD++ILPS +++F K++ + + VNPG L+
Sbjct: 402 AHEVNLDVTHWDQMSLGDTAPDVLILPSKLRHFSKIV-----------DETLVVNPGHLS 450
Query: 597 KGEGSGTFAEIYYH-GSPEMM 616
+ GTFA+I H SPE +
Sbjct: 451 RANAPGTFAKITVHPSSPERL 471
>gi|189200140|ref|XP_001936407.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983506|gb|EDU48994.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 694
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 204/456 (44%), Gaps = 87/456 (19%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEP-TDPTVASQRTLFAVGMICCD-GDGHLNDKSVL 269
+DR + + +R+ S+GL E +P S + AVG I D +G LN +++
Sbjct: 233 DDRIDEFRDLVRE------SAGLDESAFGNPNYPSPNEIIAVGRIASDTSEGKLNTATIV 286
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
L+ S + G+RV L++ L + FPGQ+V + G+N SG + S+++ LP+
Sbjct: 287 LEGSRRYGSGRRVPLNVEGLSSYDFFPGQIVALRGTNASGDSFVVSEVLS---LPLLNPP 343
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEI---SMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
P A++ T S PE + +M+IA+GP+TT NL F PL + A
Sbjct: 344 ATKPDELDAINTRYLDTP-DSDPENVRPLTMMIASGPYTTDQNLDFAPLHAFLDNAAEAY 402
Query: 387 PQLLILLGPFVDSEHPQIKKGTTD---------SSFDEIFHLEILRRLQDYVEYMGSEVR 437
+IL+GPF+D+EHPQI+ G D ++ ++F I +Q + + + +
Sbjct: 403 ADSIILVGPFLDAEHPQIRSGDFDVPPNASPDQATMTDLFRYHISSAIQGFNKRVPT-CN 461
Query: 438 AILVPSIRDANHDF-VLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
+LVPS+RDA+H PQ F ++ + +TNP T N++ V ++D L
Sbjct: 462 VLLVPSLRDAHHHHAAFPQDKFIKKELGFGAAGKMVQCVTNPMTVSMNEMTVAMSSIDNL 521
Query: 494 KQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP----------------- 536
L EE++ K T+N IY + F PL+PP
Sbjct: 522 DMLRKEELA-GGKARTTN----IYERCARNVIEQRSFLPLFPPTGREKQQFMPVPIEEKV 576
Query: 537 --------------AE-----------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
AE G LD S + ++ PDI+I PS ++ +K
Sbjct: 577 MKNGTGNEQGEGNGAEEEQTPSPFLPLGTMLDTSYLKLGEMLNVRPDILITPSVLQGTVK 636
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
V+ + + +NPG LAK +GT+A +
Sbjct: 637 VV-----------ESVLVINPGTLAKRRAAGTYARV 661
>gi|50553420|ref|XP_504121.1| YALI0E18832p [Yarrowia lipolytica]
gi|49649990|emb|CAG79716.1| YALI0E18832p [Yarrowia lipolytica CLIB122]
Length = 608
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 196/424 (46%), Gaps = 66/424 (15%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYE---EPTDPTVASQRTLFAVGMICCDG-- 259
+ MY + + L+ +I ++ + V GL + E +P+++ Q ++ G I D
Sbjct: 203 KTMYQKVSEASETLDEQIEQYMDWCVQKGLVKSNAEFKNPSLSDQNSIVCAGRIVLDTPE 262
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
L D SVLL++ G RV+L+L L SL PGQ++ ++G N SG + +++
Sbjct: 263 TVRLTDASVLLETPRSRGGALRVKLNLSLLPSVSLIPGQLLALKGVNSSGREFVVEEILK 322
Query: 320 QIPLPVDAVVDVH--PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKE 377
P P V +V PS+ Q IIAAGP+TTT +L F PLK+
Sbjct: 323 LDPPPFRQVDNVAETPSLTQ--------------------IIAAGPYTTTKDLDFLPLKD 362
Query: 378 LISYAKRKQPQ-LLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV 436
L++ QP ILLGPF+DS HP + +G+ + +E L R +
Sbjct: 363 LLA-----QPADTFILLGPFIDSVHPLVAQGSFSVPGKMVATVEDLFRHKIAPLLNACPA 417
Query: 437 RAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQ 495
+ IL+PS RD+ + PQP + ++ + TNP F N++ G +D+++
Sbjct: 418 QIILIPSTRDSVSAHLAFPQPALARKALNLGKNVICRTNPAQFSINELMFGTANLDIVRA 477
Query: 496 LSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALT--- 552
++ E+++ S++ + R Y ++ + YPL P + + + LT
Sbjct: 478 VAQSELNKGSQEDFMS-RAGRYVVEQRSL------YPLLPGPQAKQPGVAEENQTLTYHH 530
Query: 553 -----------ISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS 601
+ PDIII+PS ++ F++V++ V +NPG L + +
Sbjct: 531 LDKAYLGLCDFVDVSPDIIIMPSQVQAFVRVVN-----------SIVIINPGYLTRMDSG 579
Query: 602 GTFA 605
G++A
Sbjct: 580 GSYA 583
>gi|307201565|gb|EFN81327.1| DNA polymerase subunit alpha B [Harpegnathos saltator]
Length = 470
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 45/338 (13%)
Query: 277 SGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMK 336
S + LD + +S+F GQ+V +E +NP G L ++ + P P+
Sbjct: 161 SVADSIELDFRNVKHYSVFSGQIVAVEATNPVGDVLYVKEIFAKAYAP--------PACA 212
Query: 337 QALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF 396
++ + ++ +AAGPFT ++N++++PL +L+ +P +L+L+GPF
Sbjct: 213 PRIEANV------------NIFVAAGPFTASNNMHYQPLWDLMEKVASDEPHILVLVGPF 260
Query: 397 VDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQP 456
++ HP+I+ G + E+F + L +E + +LV S RDA+H+ + P P
Sbjct: 261 LEYTHPEIQDGLVKDTHQELFE----KTLTRIMESAKRSTQVVLVTSNRDAHHEPIFPTP 316
Query: 457 PFDIQPPDIIHQITSLT---NPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDR 513
+ + ++ ++L +P + +K+G +VDV+K + EE+S S DR
Sbjct: 317 QYTVFDKKLLQNYSNLKLMPDPCILDIFGLKIGVTSVDVIKHIGKEEISNIS----GMDR 372
Query: 514 MEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVL 573
+ + D L FYP+YP +E + +D L ++ P I+ILPSDM+ + KV+
Sbjct: 373 LSRLA-DHVLAQTC--FYPVYPSSEDLNVDTELWEKYAFFDQQPHILILPSDMRCYCKVI 429
Query: 574 SLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHG 611
+CV +NP R+ K + + +HG
Sbjct: 430 -----------HECVILNPERMHKNTYARLCVKPVFHG 456
>gi|353237594|emb|CCA69563.1| related to POL12 (DNA-directed DNA polymerase alpha)
[Piriformospora indica DSM 11827]
Length = 487
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 195/412 (47%), Gaps = 58/412 (14%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
R+M++R +R L++RI + A + + E+ DP S + VG ICCDGD LN
Sbjct: 78 RYMHERIAERSTVLDDRIDEFAELVRTHYKLEDIGDPASTSDEDVIVVGRICCDGDTKLN 137
Query: 265 DKSVLLQSSVEHSGGQRVRL----DLHKLGEFS---LFPGQVVGIEGSNPSGHCLIASK- 316
+ SV L++S G RV L ++ G+ S L+PG +V ++G N +G S+
Sbjct: 138 EASVELETSRLMGAGARVALKFDPNVSSNGDSSMLPLYPGAIVALKGRNETGSWFQVSQI 197
Query: 317 -LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPL 375
++ +PL +D+ HP ISM IAAGPF + D+L +
Sbjct: 198 LMLPLLPLDIDSNRQEHP---------------------ISMAIAAGPF-SGDDLQYTHF 235
Query: 376 KELISYAKRKQPQLLIL-LGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGS 434
+ P ++L +GPFVD +P+I++G D + +++F IL L+ +++
Sbjct: 236 DTFLQTINGSAPNWILLQIGPFVDVNNPRIREGDVDLAPNDLFRQRILSPLRTFLDAHPG 295
Query: 435 EVRAILVPSIRD-ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
A++V S+RD +H V PQPP + +I L NP TF + ++ +VDVL
Sbjct: 296 TT-ALIVSSVRDLISHHAVYPQPPLQLPQSS---RIVVLPNPCTFTIDHVRFSVTSVDVL 351
Query: 494 KQLSGEEM-SRCSKDGTSN--DRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSL---A 547
L + + + GT D+M I S + FYPL+P + D +L
Sbjct: 352 FHLQRQLLRKKVIPTGTPPPIDQMSILG---SCVLEQRSFYPLFPAEPELHADVNLDVSH 408
Query: 548 QEALTISTI-PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
E L + + PD++ILPS++ F KV+ +NP +KG
Sbjct: 409 SELLKLEDVAPDVLILPSNLGKFHKVV-----------HGTTVINPAFASKG 449
>gi|121713938|ref|XP_001274580.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
gi|119402733|gb|EAW13154.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
Length = 668
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 186/402 (46%), Gaps = 56/402 (13%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG + D +G LN S++L++S G RV L+L + + FPGQ
Sbjct: 261 SAATQSTSEIIAVGRVASDSLEGKLNTASLVLETSRRTGAGLRVPLNLDSIPSANFFPGQ 320
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAV--VDVHPSMKQALDQEIHSTVVISRPEEIS 356
+V + G N SG+ +++ LP A VD+ S+ Q LD+ S+ ++
Sbjct: 321 IVALRGINASGNYFTVKEVLSPPLLPPAASSPVDIE-SINQRLDEAGSSS-------PLN 372
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD------ 410
+ IA+GP+T DNL FEPL+E+ A +L+GPF+D EHP + G D
Sbjct: 373 VFIASGPYTADDNLGFEPLQEICQKAAESYADSFVLMGPFLDIEHPLLASGDLDLPEIQG 432
Query: 411 -----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPD 464
++ +F I LQ + S + +++PS+RDA V PQ +
Sbjct: 433 IDPDTATLTTVFRHCIAAPLQKLAAAVPS-ITIVMIPSVRDALSKHVSWPQERLPKKELG 491
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISL 523
+ Q+ ++NP T N+ +G C+ DVL L EE+ K+G R+ Y ++
Sbjct: 492 LPKQVRMVSNPVTLSFNETVIGMCSYDVLYDLRREEVLHGRPKEGNLLTRLPKYLIE--- 548
Query: 524 MGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKY 568
F PL+P A G LD S + + PD++I PS +
Sbjct: 549 ---QRHFMPLFPSTARENLPRPGTENGTATGAMLDVSYFKLGEWWNVRPDVLITPSLLPP 605
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F+K+ + + +NPG L+K +GT+ ++ H
Sbjct: 606 FVKL--------NQVVDSVLVINPGTLSKRRAAGTYTQMAIH 639
>gi|408397989|gb|EKJ77126.1| hypothetical protein FPSE_02770 [Fusarium pseudograminearum CS3096]
Length = 655
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 188/407 (46%), Gaps = 60/407 (14%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S G RV L + + +S FPGQ
Sbjct: 243 SAAAQSTTEVVAVGRIASDSPEGKLNAASLVLETSRRTGMGLRVPLKMDSIRSWSFFPGQ 302
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDA----VVDVHPSMKQ----ALDQEIHSTVVIS 350
+V G+N SG + +++D LP A ++ H + A+D++ S
Sbjct: 303 IVAFRGTNASGSEFVVKEVLDMPILPSAASSASTLEAHREKFRGGPDAMDED-------S 355
Query: 351 RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD 410
P ++++ A+GP+T DNL FEPL L S A L+L GPF+D +HP I G D
Sbjct: 356 EPAPLNILYASGPYTADDNLDFEPLHALCSQAADTYADALVLTGPFLDIDHPLIATGDFD 415
Query: 411 ----SSFD-------EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPF 458
++FD +F + + + ++ +LVPS+RD V PQ
Sbjct: 416 LPEEANFDPDTATMSTVFKYLVAPAF-NRLASSNPQITIVLVPSVRDVLSKHVSWPQDTI 474
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
+ + + +TNP T N++ +G + D+L QL EE+ S D M S
Sbjct: 475 PRKELGLPKAVRIVTNPMTLSINEVVLGVSSQDILSQLRSEEVVSRGGAQPSGDLM---S 531
Query: 519 LDISLMGPAFFFYPLYPPAE---------------GIPLDFSLAQEALTISTIPDIIILP 563
+ ++PL+PP E G LD S + ++ PD++++P
Sbjct: 532 RLCRYLVEQRHYFPLFPPTERSKLPKTGTEDGVATGAVLDLSYLELGEMVNVRPDVMVVP 591
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
S + F KV+ + + +NPG L+K G+GT+A + +
Sbjct: 592 SLLPPFAKVV-----------ESVLLINPGYLSKRRGAGTYARMTLY 627
>gi|190408861|gb|EDV12126.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae RM11-1a]
Length = 705
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 190/418 (45%), Gaps = 84/418 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 285 DPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFL 344
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 345 GQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQASLEGSSLK 394
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG-------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 395 VIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 454
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DIQ 461
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +Q
Sbjct: 455 KTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKALQ 509
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 LPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVSE 562
Query: 522 SLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI---- 556
++ +YP++P + P D S +E L +S +
Sbjct: 563 HILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTE 621
Query: 557 ------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 622 FVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 668
>gi|406694680|gb|EKC98004.1| alpha DNA polymerase [Trichosporon asahii var. asahii CBS 8904]
Length = 495
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 200/441 (45%), Gaps = 52/441 (11%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICC--DGDGH 262
R+M+++ R AL+ +I A ++ + E DP V ++ + VG I
Sbjct: 54 RYMFEKMSARSEALDEQIDTFAFTIMDAYGLTELGDPHVPAEDATYTVGRILSPPTDSNK 113
Query: 263 LNDKSVLLQSSVEHSGGQ----------RVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCL 312
S+ LQSS + GG +VR + F LFPG +V ++G N G
Sbjct: 114 ATVGSLYLQSSRQFGGGNIVPLRFSPDVKVRGGAPGVRGFGLFPGCLVCVKGRNGGGDAY 173
Query: 313 IASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMII--AAGPFTTTDNL 370
+A D++ +P + + +L EI R + M I AGP+T +NL
Sbjct: 174 VA----DEVLMPPAQI------LPSSLPDEIVQYQQGERLGGLPMSIYSCAGPYTLDNNL 223
Query: 371 YFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
+EPL L+ ++P +I+LGPFVD+ HP I G + E+F +I RL E
Sbjct: 224 EYEPLDALVDVVCDERPDAVIMLGPFVDAHHPAIASGALRQTPVELFRQQIASRLARINE 283
Query: 431 YMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCT 489
V IL+PS+RD + PQ + + ++ L NP TF N++ + +
Sbjct: 284 ESPGTV-VILIPSVRDLLSRHAAFPQAMLERDGLGLSKRVKVLPNPCTFSLNEVVISTSS 342
Query: 490 VDVLKQLSGEEMSRCSKDGTSNDRMEI---------YSLDISLMGPAFFFYPLYPPAEGI 540
VD L L EE+ + +++ + + +L ++G FYPL+P E +
Sbjct: 343 VDTLFHLRREELFQRAEEAEPDPSTPVNRNPQGDAMANLVRHVLG-QRSFYPLFPAPEAL 401
Query: 541 P----LDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLA 596
LD + + T PD++ILPS +++F K++ + + VNPG L+
Sbjct: 402 AHEVNLDVTHWDQMSLGDTAPDVLILPSKLRHFSKIVD-----------ETLVVNPGHLS 450
Query: 597 KGEGSGTFAEIYYHGS-PEMM 616
+ GTFA+I H S PE +
Sbjct: 451 RANAPGTFAKITVHPSTPERL 471
>gi|256272739|gb|EEU07712.1| Pol12p [Saccharomyces cerevisiae JAY291]
gi|259144812|emb|CAY77751.1| Pol12p [Saccharomyces cerevisiae EC1118]
Length = 705
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 190/418 (45%), Gaps = 84/418 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 285 DPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFL 344
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 345 GQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQASLEGSSLK 394
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG-------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 395 VIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 454
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DIQ 461
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +Q
Sbjct: 455 KTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKALQ 509
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 LPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVSE 562
Query: 522 SLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI---- 556
++ +YP++P + P D S +E L +S +
Sbjct: 563 HILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTE 621
Query: 557 ------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 622 FVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 668
>gi|349576345|dbj|GAA21516.1| K7_Pol12p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 705
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 190/418 (45%), Gaps = 84/418 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 285 DPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFL 344
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 345 GQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQANLEGSSLK 394
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG-------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 395 VIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 454
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DIQ 461
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +Q
Sbjct: 455 KTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKALQ 509
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 LPK--RNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVSE 562
Query: 522 SLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI---- 556
++ +YP++P + P D S +E L +S +
Sbjct: 563 HILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTE 621
Query: 557 ------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 622 FVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 668
>gi|330931777|ref|XP_003303534.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
gi|311320427|gb|EFQ88380.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
Length = 694
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 202/456 (44%), Gaps = 87/456 (19%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEP-TDPTVASQRTLFAVGMICCD-GDGHLNDKSVL 269
+DR + + +R+ S+GL E +P S + AVG I D +G LN +++
Sbjct: 233 DDRIDEFRDLVRE------SAGLDESVFGNPNYPSPNEIIAVGRIASDTSEGKLNTATIV 286
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
L+ S H G+RV L++ L + FPGQ+V + G+N SG + S+++ LP+
Sbjct: 287 LEGSRRHGSGRRVPLNVEGLSSYDFFPGQIVALRGTNASGDSFVVSEVLS---LPLLNPP 343
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEI---SMIIAAGPFTTTDNLYFEPLKELISYAKRKQ 386
P A++ T S PE + +++IA+GP+TT NL F PL + A
Sbjct: 344 ATKPDELDAINTRYLDTP-DSDPENVRPLTIMIASGPYTTDQNLDFAPLHTFLDNAAEAY 402
Query: 387 PQLLILLGPFVDSEHPQIKKGTTD---------SSFDEIFHLEILRRLQDYVEYMGSEVR 437
+IL+GPF+D+EHPQ++ G D ++ ++F I +Q + + + +
Sbjct: 403 ADSIILVGPFLDAEHPQVRSGDFDVPPNASPDQATMTDLFRYHISSAIQSFNKRVPT-CN 461
Query: 438 AILVPSIRDANHDF-VLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
+LVPS+RDA+H PQ F ++ + +TNP T N++ V ++D L
Sbjct: 462 VLLVPSLRDAHHHHAAFPQDKFIKKELGFGAAGKMVQCVTNPMTVSMNEMTVAMSSIDNL 521
Query: 494 KQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE--------------- 538
L EE++ K T+N IY + F PL+PP
Sbjct: 522 DMLRREELA-GGKARTTN----IYERCARNVIEQRSFLPLFPPTGREKQQFMPVSIEEKV 576
Query: 539 ---------------------------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
G LD S + ++ PDI+I PS ++ +K
Sbjct: 577 MKNGTGNEQGEGEGAEEEQTPSPFLPLGTMLDTSYLKLGEMLNVRPDILITPSVLQGTVK 636
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
V+ + + +NPG LAK +GT+A +
Sbjct: 637 VV-----------ESVLVINPGTLAKRRAAGTYARV 661
>gi|46125287|ref|XP_387197.1| hypothetical protein FG07021.1 [Gibberella zeae PH-1]
Length = 655
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 190/408 (46%), Gaps = 62/408 (15%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S G RV L + + +S FPGQ
Sbjct: 243 SAAAQSTTEVVAVGRIASDSPEGKLNAASLVLETSRRTGMGLRVPLKMDSVRSWSFFPGQ 302
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDA----VVDVHPSMKQ----ALDQEIHSTVVIS 350
+V G+N SG + +++D LP A ++VH + A+D++ S
Sbjct: 303 IVAFRGTNASGSEFVVKEILDMPILPSAASSASTLEVHREKFRGGPDAMDED-------S 355
Query: 351 RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD 410
P ++++ A+GP+T DNL FEPL L S A L+L GPF+D +HP I G D
Sbjct: 356 EPAPLNILYASGPYTADDNLDFEPLHALCSQAADTYADALVLTGPFLDIDHPLIATGDFD 415
Query: 411 ----SSFD-------EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPF 458
++FD +F + ++ +LVPS+RD V PQ
Sbjct: 416 LPEEANFDPDTVTMSTVFKYLVAPAFSRLASS-NPQITIVLVPSVRDVLSKHVSWPQDTI 474
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIY 517
+ + + +TNP T N++ +G + D+L QL EE +SR G + ++
Sbjct: 475 PRKELGLPKAVRIVTNPMTLSINEVVLGVSSQDILSQLRSEEVVSR----GGAQPGGDLM 530
Query: 518 SLDISLMGPAFFFYPLYPPAE---------------GIPLDFSLAQEALTISTIPDIIIL 562
S + ++PL+PP E G LD S + ++ PD++++
Sbjct: 531 SRLCRYLVEQRHYFPLFPPTERSKLPKTGTEDGVATGAVLDLSYLELGEMVNVRPDVMVV 590
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
PS + F KV+ + + +NPG L+K G+GT+A + +
Sbjct: 591 PSLLPPFAKVV-----------ESVLLINPGYLSKRRGAGTYARMTLY 627
>gi|6319436|ref|NP_009518.1| Pol12p [Saccharomyces cerevisiae S288c]
gi|585063|sp|P38121.1|DPOA2_YEAST RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase I subunit B; AltName: Full=DNA polymerase
alpha:primase complex p86 subunit; Short=Pol
alpha-primase complex p86 subunit; AltName: Full=DNA
polymerase-primase complex p74 subunit
gi|511143|emb|CAA52761.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536045|emb|CAA84855.1| POL12 [Saccharomyces cerevisiae]
gi|285810299|tpg|DAA07084.1| TPA: Pol12p [Saccharomyces cerevisiae S288c]
gi|392301181|gb|EIW12270.1| Pol12p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1583516|prf||2120451C ORF YBL0415
Length = 705
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 190/418 (45%), Gaps = 84/418 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 285 DPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFL 344
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 345 GQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQANLEGSSLK 394
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG-------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 395 VIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 454
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DIQ 461
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +Q
Sbjct: 455 KTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKALQ 509
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 LPK--RNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVSE 562
Query: 522 SLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI---- 556
++ +YP++P + P D S +E L +S +
Sbjct: 563 HILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTE 621
Query: 557 ------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 622 FVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 668
>gi|212529860|ref|XP_002145087.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
gi|210074485|gb|EEA28572.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
Length = 654
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 156/641 (24%), Positives = 262/641 (40%), Gaps = 89/641 (13%)
Query: 21 EVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIK 80
++L + + + + P +L WE Y + D++ + + + F +Q+ +
Sbjct: 23 DILTELQSMLRLHGITPQELFYKWESYSMKMGADDTKLDLNTVRAFKRDVQDSLERET-- 80
Query: 81 EEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDKPS 140
K+ + N++ + D ++ D T ++ NG S+ + S
Sbjct: 81 --------RGKNHQVRGNEKKPGVTATPRAGKADVFGMFDDLTPGTPQSRMNG-SAKRKS 131
Query: 141 KLVTPFG---RRTEKLVVKFNINNLPNTENGC--IEHDDENTEDDIIKRIKTGKKCSLMV 195
TP G RTE I NG + + +I+ +
Sbjct: 132 NFETPSGPKIGRTEGNGTPTGIKTPSANTNGVQSVAFAERQNPGQVIETLNAYLDLPKTP 191
Query: 196 HGSGPEPGCR---------FMYDRTEDRFNA----LENRIRKHANALVSSGLYEEPTDPT 242
PEP R F Y R N L++R+ + + Y + T +
Sbjct: 192 MAPFPEPRIRPTANTDLKKFGYKPMSMRLNEASEILDDRLDEFTDLFEKH--YPDITFGS 249
Query: 243 VASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQV 299
A+Q T + AVG I D +G LN S++L++S G RV L + L FPGQV
Sbjct: 250 AATQSTSEIVAVGRIASDSLEGKLNVASLVLETSRRTGAGLRVPLKVDALPSVQFFPGQV 309
Query: 300 VGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMII 359
V + G N SG +++ LP+ PS +++ + V + +P +++
Sbjct: 310 VALRGINASGEYFSVKEVLS---LPLLPTAASSPSTLDTINERLGG-VDVDQP--LNIFY 363
Query: 360 AAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--------- 410
AAGP+T DNL FEPL+EL A + L+LLGPF+D EHP I G D
Sbjct: 364 AAGPYTADDNLDFEPLQELCKKAAEEYADALLLLGPFIDLEHPLIATGDFDLPYIPGLDP 423
Query: 411 --SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIH 467
++ +F I + L + S + +L+PS+RDA V PQ + +
Sbjct: 424 ETATLTTLFRYCISKPLHQLCAAVPS-ITIMLMPSVRDAVSKHVSWPQEQLPKKELGLPK 482
Query: 468 QITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDISLMG 525
Q ++NP T N+ +G C+ DVL L EE+ + +N R+ Y ++
Sbjct: 483 QARVVSNPVTLSLNETVIGMCSHDVLYDLRKEEV-LGGRPAEANLLTRLPKYIIE----- 536
Query: 526 PAFFFYPLYPPAE----------------GIPLDFSLAQEALTISTIPDIIILPSDMKYF 569
F P++PP+ G +D S + + PDI+I PS + F
Sbjct: 537 -QRHFAPMFPPSSRDTLPKSGGPDSMLPIGGMMDVSYLKLGDWWNVRPDILITPSMLPPF 595
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+KV+ + + +NPG L+K +GT+A + +
Sbjct: 596 VKVV-----------ESVLVINPGTLSKRRAAGTYANMALY 625
>gi|323338794|gb|EGA80009.1| Pol12p [Saccharomyces cerevisiae Vin13]
Length = 565
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 190/419 (45%), Gaps = 84/419 (20%)
Query: 239 TDPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 144 ADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFF 203
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 204 LGQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQASLEGSSL 253
Query: 356 SMIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 254 KVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQ 313
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DI 460
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +
Sbjct: 314 FKTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKAL 368
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
Q P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 369 QLPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVS 421
Query: 521 ISLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI--- 556
++ +YP++P + P D S +E L +S +
Sbjct: 422 EHILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLT 480
Query: 557 -------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 481 EFVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 528
>gi|151946359|gb|EDN64581.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae YJM789]
Length = 705
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 190/418 (45%), Gaps = 84/418 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 285 DPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFL 344
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 345 GQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQANLEGSSLK 394
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG-------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 395 VIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 454
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DIQ 461
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +Q
Sbjct: 455 KTQPKTLDELF----LKLFTPILKTISPYIQTVLIPSTKDAISNHA-AYPQASLIRKALQ 509
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 LPK--RNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVSE 562
Query: 522 SLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI---- 556
++ +YP++P + P D S +E L +S +
Sbjct: 563 HILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTE 621
Query: 557 ------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 622 FVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 668
>gi|323356256|gb|EGA88060.1| Pol12p [Saccharomyces cerevisiae VL3]
Length = 550
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 190/419 (45%), Gaps = 84/419 (20%)
Query: 239 TDPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 129 ADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFF 188
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 189 LGQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQASLEGSSL 238
Query: 356 SMIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 239 KVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQ 298
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DI 460
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +
Sbjct: 299 FKTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKAL 353
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
Q P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 354 QLPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVS 406
Query: 521 ISLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI--- 556
++ +YP++P + P D S +E L +S +
Sbjct: 407 EHILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLT 465
Query: 557 -------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 466 EFVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 513
>gi|18376383|emb|CAD21272.1| related to POL12 (DNA-directed DNA polymerase alpha) [Neurospora
crassa]
Length = 667
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 68/436 (15%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSV 274
L++RI + ++ +E + A Q T + AVG + D +G LN S++L++S
Sbjct: 227 LDDRIDDFTSLVLEHYKLDESVFGSAAMQSTTEIVAVGRVASDTSEGKLNAASLVLETSR 286
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPS 334
+ GG RV L++ KL + FPGQ+V + G+N +G ++++ ++PL +A +
Sbjct: 287 KLGGGFRVPLNVSKLKGYQFFPGQIVALRGTNTTGREFTVNEVI-RMPLMGNAASTLETM 345
Query: 335 MKQ---------ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
A+D + + P +++I A+GP+T DNL FEPL I+ A
Sbjct: 346 AAHRERLRGGPDAMDTDDEN------PMPLNVIFASGPYTADDNLDFEPLHTFINEAADT 399
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGS 434
+IL GPF+D+EHP I G D ++ + +F I L V
Sbjct: 400 YADAVILTGPFIDAEHPLIASGDFDLPEEAVYDPDAATLNTVFKYLISPALNRLVS-ANP 458
Query: 435 EVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
V +LVPS+RD + PQ PF + + I L NP T N+ VG + D L
Sbjct: 459 HVTILLVPSVRDVIDRHVSWPQDPFPRKELGLHKSIKILGNPMTLSLNETLVGISSQDAL 518
Query: 494 KQLSGEEMSRCSKDGTSN-DRMEIYSLDISLMGPAFFFYPLYPP---------------- 536
+L EE+ + + T+ R+ Y ++ ++PL+PP
Sbjct: 519 WELKHEELIGGTVEDTNGLSRVARYLIE------QRHYFPLFPPTDRTKLPKTGRQVIDG 572
Query: 537 --AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGR 594
A G LD S + ++ PD++I+PS + F KV+ + + +NPG
Sbjct: 573 QAAPGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKVI-----------ESVLVINPGY 621
Query: 595 LAKGEGSGTFAEIYYH 610
L++ + +GT+A + +
Sbjct: 622 LSQRKRAGTYARMTLY 637
>gi|323334744|gb|EGA76117.1| Pol12p [Saccharomyces cerevisiae AWRI796]
Length = 550
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 190/419 (45%), Gaps = 84/419 (20%)
Query: 239 TDPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 129 ADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFF 188
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 189 LGQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQASLEGSSL 238
Query: 356 SMIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 239 KVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQ 298
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DI 460
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +
Sbjct: 299 FKTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKAL 353
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
Q P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 354 QLPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVS 406
Query: 521 ISLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI--- 556
++ +YP++P + P D S +E L +S +
Sbjct: 407 EHILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGTDLDVSYLGLT 465
Query: 557 -------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 466 EFVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 513
>gi|327292604|ref|XP_003231000.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
gi|326466806|gb|EGD92259.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
Length = 664
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 181/399 (45%), Gaps = 61/399 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++L++S G RV L + KL + FPGQ+V +
Sbjct: 265 STREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALR 324
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG + D + +P+ + PS +A ++++ S + ++ + AAGP
Sbjct: 325 GINASGEYFT---VFDVLTIPLLPLPVSLPSEVEATNEKLDSF----GDQPLNYMFAAGP 377
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FE L L A + LILLGPF+D EHP I G D ++
Sbjct: 378 YTTDDNLAFEALNTLCEKAAEECVDTLILLGPFIDLEHPLIASGDFDLPELKGLDPDTAT 437
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDII 466
+F I R L + + IL+PS+RDA V LP+ + P
Sbjct: 438 LTTLFQHCISRPLTQLASKV-PNIYIILIPSVRDAVSKHVSWPQEILPKKELGLPP---- 492
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
Q +TNP N+I VG C D L +L EE+ G ++ S +
Sbjct: 493 KQAKVVTNPVAISLNEIMVGLCASDSLYELRREEVV-----GGRPSESDLLSRLPRYLIE 547
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTI---------------PDIIILPSDMKYFIK 571
F P++PP L S +E L I ++ PDI+I PS + F+K
Sbjct: 548 QRHFSPVFPPTARENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILITPSVLPGFVK 607
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ + + +NPG+L+K G GT+A+I H
Sbjct: 608 VV-----------ESVLVINPGKLSKRRGPGTYAQIAVH 635
>gi|207347854|gb|EDZ73899.1| YBL035Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 634
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 190/419 (45%), Gaps = 84/419 (20%)
Query: 239 TDPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 213 ADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFF 272
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 273 LGQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQASLEGSSL 322
Query: 356 SMIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 323 KVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQ 382
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DI 460
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +
Sbjct: 383 FKTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKAL 437
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
Q P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 438 QLPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVS 490
Query: 521 ISLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI--- 556
++ +YP++P + P D S +E L +S +
Sbjct: 491 EHILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLT 549
Query: 557 -------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 550 EFVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 597
>gi|255715665|ref|XP_002554114.1| KLTH0E14608p [Lachancea thermotolerans]
gi|238935496|emb|CAR23677.1| KLTH0E14608p [Lachancea thermotolerans CBS 6340]
Length = 653
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 190/405 (46%), Gaps = 69/405 (17%)
Query: 239 TDPTVASQRTLFAVGMICCD---GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
+DPT+ SQ + AVG I D DG LN +S+ L++S G+R+ L+L + E SLF
Sbjct: 245 SDPTIQSQSEITAVGRIVPDSPAADGMLNTESLALETSRLTGIGRRIPLNLERTKEVSLF 304
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
PGQ+VG+ G N SG + + + QIP H + + + E+ S + +
Sbjct: 305 PGQIVGVRGKNASGDYFVVEEFL-QIP---------HLNSPVSTEGELQSFNEDLDGKSM 354
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG------- 407
+++ GP+T ++ L F L++ + +P ++I+ GPF+D HP + G
Sbjct: 355 KVVVTNGPYTASNCLDFGNLEDFVERLNDGVKPHVVIMFGPFLDVTHPLVASGRIPEFPG 414
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPD 464
+ DE+F + + + + S+++ +LVPS D A++ PQ FD +
Sbjct: 415 VKVQPKTLDEVF----TKIISPILRKINSKIQVVLVPSTTDTASNHAAYPQDCFDRKQLQ 470
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSG--EEMSRCSKDGTSNDRMEIYSLDIS 522
+ TNP TF+ N++ VGC VD K + + + CSK+ DR+ + L
Sbjct: 471 LPKNFKCFTNPSTFQLNELFVGCSNVDAFKDIKEVVKGGATCSKN--RFDRIAEHILSQR 528
Query: 523 LMGPAFFFYPLYPPA------------------EGIPLDFS-LAQEALTISTIPDIIILP 563
FYPL+P A G L+ S L + +PD++I+P
Sbjct: 529 R------FYPLFPGALKRRKLRLEDGHDVWEHVSGADLEVSYLGLTEFVANLLPDLVIIP 582
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG-SGTFAEI 607
S++ YF +V+ + + +NPG + G GTFA++
Sbjct: 583 SELSYFTRVV-----------QNVLFINPGMFIRPTGLRGTFAQL 616
>gi|350417323|ref|XP_003491366.1| PREDICTED: DNA polymerase alpha subunit B-like [Bombus impatiens]
Length = 593
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 159/319 (49%), Gaps = 44/319 (13%)
Query: 282 VRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQ 341
+ L+L + +S+F GQ+V +EG + L +KL + P+ V +
Sbjct: 288 LHLNLKAIKHYSVFTGQIVAVEGIITTEDTLTVNKLFVKGYAPLFDVPKIS--------- 338
Query: 342 EIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEH 401
++I + +AAGPFT +DNL ++PL +L+ +P +LIL+GPFV+ H
Sbjct: 339 -----------KDIKIYVAAGPFTPSDNLNYQPLWDLMERVVEDEPNMLILVGPFVEYTH 387
Query: 402 PQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ 461
P+IKK + +F + F +L ++ Y++ G R ILVPS RD +H V P P F +
Sbjct: 388 PEIKKCSLKETFQDFFD-TLLTKILQYLQ--GKSTRIILVPSNRDVHHHPVFPTPEFILN 444
Query: 462 PPDI---IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
+ I S+ +P + + +G +VDVL+ L +E+S + DR+ +
Sbjct: 445 TNKLGSSTTNICSMPDPCIINVDGLHIGVTSVDVLRHLGQQEVS----NTPGMDRLGRLA 500
Query: 519 LDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGR 578
+ FYP+YPP G+ LD L ++ P ++ILPSD++++ K L+
Sbjct: 501 EHVLSQSS---FYPVYPPPPGLNLDTRLWKQYACFERQPHVLILPSDVRHYCKPLN---- 553
Query: 579 NEGEEQKKCVCVNPGRLAK 597
+C+ +NP RL K
Sbjct: 554 -------ECLVLNPERLQK 565
>gi|239781862|pdb|3FLO|A Chain A, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781865|pdb|3FLO|C Chain C, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781868|pdb|3FLO|E Chain E, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781871|pdb|3FLO|G Chain G, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
Length = 460
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 190/419 (45%), Gaps = 84/419 (20%)
Query: 239 TDPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 39 ADPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFF 98
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 99 LGQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQANLEGSSL 148
Query: 356 SMIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG------- 407
+I+ GP+ DN E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 149 KVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQ 208
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DI 460
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +
Sbjct: 209 FKTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKAL 263
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
Q P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 264 QLPK--RNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVS 316
Query: 521 ISLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI--- 556
++ +YP++P + P D S +E L +S +
Sbjct: 317 EHILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLT 375
Query: 557 -------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 376 EFVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 423
>gi|340714315|ref|XP_003395675.1| PREDICTED: DNA polymerase alpha subunit B-like [Bombus terrestris]
Length = 593
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 159/319 (49%), Gaps = 44/319 (13%)
Query: 282 VRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQ 341
+ L+L + +S+F GQ+V +EG + L +KL + P+ V +
Sbjct: 288 LHLNLKGIKHYSVFTGQIVAVEGIITTEDTLTVNKLFVKGYAPLFDVPKIS--------- 338
Query: 342 EIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEH 401
++I + +AAGPFT +DNL ++PL +L+ +P +LIL+GPFV+ H
Sbjct: 339 -----------KDIKIYVAAGPFTPSDNLNYQPLWDLMERVVEDEPNMLILVGPFVEYTH 387
Query: 402 PQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ 461
P+IKK + +F + F +L ++ Y++ G R ILVPS RD +H V P P F +
Sbjct: 388 PEIKKCSLKETFQDFFD-TLLTKILQYLQ--GKSTRIILVPSNRDVHHHPVFPTPEFILN 444
Query: 462 PPDI---IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
+ I S+ +P + + +G +VDVL+ L +E+S + DR+ +
Sbjct: 445 TNKLGSNTTNICSMPDPCIINVDGLHIGVTSVDVLRHLGQQEVS----NTPGMDRLGRLA 500
Query: 519 LDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGR 578
+ FYP+YPP G+ LD L ++ P ++ILPSD++++ K L+
Sbjct: 501 EHVLSQSS---FYPVYPPPPGLNLDTRLWKQYACFERQPHVLILPSDVRHYCKPLN---- 553
Query: 579 NEGEEQKKCVCVNPGRLAK 597
+C+ +NP RL K
Sbjct: 554 -------ECLVLNPERLQK 565
>gi|453087977|gb|EMF16018.1| DNA polymerase alpha, subunit B [Mycosphaerella populorum SO2202]
Length = 665
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 79/418 (18%)
Query: 240 DPTVASQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+P S + AVG I CD G LN S++L++S G RV L L + F FPG+
Sbjct: 244 NPAAQSTSDIVAVGRIACDQPTGKLNASSIVLETSRRMGAGMRVPLKLDGV-TFDFFPGK 302
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE---I 355
+V + G+N SGH + ++ +P+P+ + P+ + D ++H+ + S E +
Sbjct: 303 IVALRGTNVSGHHFLVREV---LPMPL-----LPPAASRPEDIDVHNDRLTSADGETRPL 354
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD----- 410
M++AAGP+TT +L F PL L+ A ++ +L+L+GPF+D EHP + G +
Sbjct: 355 HMLLAAGPYTTESDLSFAPLYTLLERATTERADVLVLMGPFLDLEHPVVASGDFEQHLPA 414
Query: 411 --------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQP 456
++ ++F + I +Q + + + + I+VPS+RDA V +P+P
Sbjct: 415 DAKIEPDQATLTDVFRVLISSAIQRLAQAVPT-MTIIMVPSMRDAISKHVSWPQDRVPKP 473
Query: 457 PFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQL--SGEEMSRCSKDGTSNDRM 514
+ Q+ + NP N++ G + DVL +L S S +ND +
Sbjct: 474 QLGLP-----RQVQFVANPMALFLNEMIFGMSSQDVLSELHRSSAAQSATGDKPLNNDLL 528
Query: 515 EIYSLDISLMGPAFFFYPLYPP-------------------------AEGIPLDFSLAQE 549
S I ++P++PP A G LD S +
Sbjct: 529 ARLSEQIIEQS---HYFPIFPPMAREDLPKPAAIPDEVPEPGGEERMALGANLDLSYYKL 585
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
PD+++LPS + F + + + +C+NPG L+K G+GTFA +
Sbjct: 586 GEFWQARPDVLLLPSTLMPFARFI-----------QGVLCINPGTLSKKRGAGTFASL 632
>gi|342880849|gb|EGU81867.1| hypothetical protein FOXB_07662 [Fusarium oxysporum Fo5176]
Length = 655
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 192/414 (46%), Gaps = 68/414 (16%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ A+Q T + AVG I D +G LN S++L++S G RV L + + +S FPGQ
Sbjct: 243 SAAAQSTTEVVAVGRIASDSSEGKLNAASLVLETSRRTGMGLRVPLKVDNIRSWSFFPGQ 302
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQ-----------ALDQEIHSTV 347
+V G+N SG+ + ++++ LP A + PS + A+D++
Sbjct: 303 IVAFRGTNASGNEFVVKEVLEVPLLPSAASL---PSALEGHRERFRGGPDAMDED----- 354
Query: 348 VISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKG 407
S P ++++ A+GP+T DNL FEPL L S A L+L GPF+D +HP I G
Sbjct: 355 --SEPAPLNILYASGPYTADDNLDFEPLHALCSQAGDTYADALVLTGPFLDIDHPLIATG 412
Query: 408 TTD----SSFD-------EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQ 455
D ++FD +F + + + ++ ILVPS+RD V PQ
Sbjct: 413 DFDLPEEANFDPDTATMSTVFKYLVAPAF-NRLAASNPQITIILVPSVRDVLSKHVSWPQ 471
Query: 456 PPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRM 514
+ + + +TNP T N++ +G + D+L QL EE +SR G
Sbjct: 472 DSIPRKELGLPKMVRIVTNPMTLSINELVLGVSSQDILSQLRSEEVVSR----GGGQPGT 527
Query: 515 EIYSLDISLMGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDI 559
++ S + ++PL+PP A G LD S + ++ PD+
Sbjct: 528 DLMSRLCRYLVEQRHYFPLFPPTDRSKLPKTGTEDGLATGAALDLSYLELGEMVNVRPDV 587
Query: 560 IILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSP 613
+I+PS + F KV+ + + +NPG L+K G+GT+A + + P
Sbjct: 588 MIVPSLLPPFAKVV-----------ESVLLINPGYLSKRRGAGTYARMTLYPPP 630
>gi|145352257|ref|XP_001420468.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580702|gb|ABO98761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 248
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 137/262 (52%), Gaps = 28/262 (10%)
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS-SFDE 415
+I+A+GPF+ + +L +EPL +++ Y + + P L+L GP VD+E+ +K+ ++DE
Sbjct: 1 VIVASGPFSCSSDLKYEPLNDMLDYVREENPDALVLCGPLVDAENAFVKRAECGGLTYDE 60
Query: 416 IFHLEILRRLQDYVEYMGSEVR--AILVPSIRDANHDFVLPQPPFDIQP-----PDIIHQ 468
+ + ++ +++D + + +R I VPSIRD D V PQP + +
Sbjct: 61 VAKV-VVDKIEDKL-FKDETIRTKVIFVPSIRDVTLDPVFPQPAASLDAYVSADAARAKR 118
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAF 528
S +NPGTF N I C+ DVLK LS +E+ SK DR+ + + G A
Sbjct: 119 AFSASNPGTFTINGIVFSACSHDVLKHLSAQEI---SKGFVPKDRLARLAKHVLTQGCA- 174
Query: 529 FFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCV 588
YPLYPP LD ++ LT PD++I+PSD+K F E+ V
Sbjct: 175 --YPLYPPDASACLDARYGED-LTFKQTPDVLIMPSDLKTF-----------AEDIDGVV 220
Query: 589 CVNPGRLAKGEGSGTFAEIYYH 610
CVNPGRLA+G G A+I H
Sbjct: 221 CVNPGRLARGAVGGGLAKIVVH 242
>gi|198420427|ref|XP_002131276.1| PREDICTED: similar to Polymerase (DNA directed), alpha 2 (70kD
subunit) [Ciona intestinalis]
Length = 535
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 199/425 (46%), Gaps = 50/425 (11%)
Query: 185 IKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA 244
+ G + + V G + G ++M+ R ++ + + I + ++ E P
Sbjct: 144 VWRGGRGRVKVTWEGRKKG-KYMFQRMQESCDVNNDHIEIGGSLIMEENKEIESYAPCGG 202
Query: 245 -SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
SQ + +G + + L SV L+ S G+ + + L EFSLFPG++V +
Sbjct: 203 NSQTPVVIMGRVRSEDGAKLTPHSVALEGDRGVSSGRVGVVGVEGLTEFSLFPGKLVAMR 262
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N G SK+ + +P V + + D S+ + ++++A+GP
Sbjct: 263 GVNIDGRKFHVSKIFN-LPRRVGRM--------RVGDG--------SKEDHFTIMVASGP 305
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILR 423
FTT+D+ +PL + + + QP L I +GP V+ + G T + + + I+
Sbjct: 306 FTTSDSDDHKPLLDFLDVVTKMQPSLTIFIGPLVE----KATSGKTYADSAKFWTSHIIN 361
Query: 424 RLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEAN-Q 482
+ D E + VPS RD H V PQPP++I +H + +NP T N +
Sbjct: 362 TISDITE-------VVFVPSQRDLFHHPVYPQPPYNIPGSTKVHFV---SNPATIIVNDK 411
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPL 542
IK+G + D+L L E+SR + +DR+ I G FYPLYPP + + L
Sbjct: 412 IKIGVSSTDILFHLVATEISRSAT--KKSDRIGRLVSHILNQGS---FYPLYPPDKSVNL 466
Query: 543 DFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSG 602
D +++ I D+++LPS++++FIK + G +C+NPGR+ KG+ G
Sbjct: 467 DLLSSEDHGRIPPDVDLVLLPSNLQHFIK--DVAGH---------ICINPGRIVKGKSGG 515
Query: 603 TFAEI 607
T+A I
Sbjct: 516 TYARI 520
>gi|156836867|ref|XP_001642474.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156113008|gb|EDO14616.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 670
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 65/417 (15%)
Query: 240 DPTVASQRTLFAVGMICCD---GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++ VG I D +G LN +S+ L++S G+RVRLDL K+ E +LF
Sbjct: 264 DPTIQSQSEIYTVGRIVPDSPTAEGFLNTESLALETSRSGGIGRRVRLDLTKVAELTLFC 323
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + ++ I LP +P + +I + ++ + +
Sbjct: 324 GQLVAFKGKNANGDYFMVEEI---ISLP-------YPDSPVSTSDDIQESQLLLDNKSMK 373
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG-------- 407
++I +GP+ ++ E L + + +P +LI+ GPFVD +P + KG
Sbjct: 374 VVITSGPYFPDNSFDLEYLVSFVEKINNEIKPHILIMFGPFVDVTNPLVAKGAIPNFPNL 433
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDI 465
+ + DEIF + L++ + S+++ IL+PS RD+ + PQ D + +
Sbjct: 434 KSQPKTLDEIFTKVFVPLLKN----INSKIQIILIPSTRDSVSKHAAYPQDSLDRKLLQL 489
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMG 525
TNP TF+ N++ GC VD+ K +M +K G ++ R + ++
Sbjct: 490 PKNFKCFTNPSTFQLNEVFFGCSNVDLFK-----DMKEITKGGNTSMRNRFDRVSEHMLQ 544
Query: 526 PAFFFYPLYPPA-----------------EGIPLDFS-LAQEALTISTIPDIIILPSDMK 567
+YP+ P G LD L PD+II+PS+++
Sbjct: 545 QR-RYYPVLPGGIKKQPITENGKKRYVHISGADLDVPYLGLTEFIGGFAPDVIIVPSELQ 603
Query: 568 YFIKVLSLGGRNEGEEQKKCVCVNPGRLAK-GEGSGTFAEIYYHGSPEMMNASIISI 623
YF +V+ + V +NPGR + G GTF ++ SP + N + +
Sbjct: 604 YFARVI-----------QNVVVINPGRFVRPNGGRGTFIQMTIE-SPNLENGKLTKM 648
>gi|365767038|gb|EHN08526.1| Pol12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 705
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 190/418 (45%), Gaps = 84/418 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 285 DPTIQSQSEIYAVGRIVPDSPTYDKFLNPESLSLETSRMGGVGRRVRLDLSQVNELSFFL 344
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V +G N +G + + +PLP +P+ + QE+ +
Sbjct: 345 GQIVAFKGKNANGDYFTVNSI---LPLP-------YPNSPVSTSQELQEFQTSLEGSSLK 394
Query: 357 MIIAAGPFTTTDNLYFEPLKELI-SYAKRKQPQLLILLGPFVDSEHPQIKKG-------- 407
+I+ GP+ D + E L+E I S +P +LI+ GPF+D HP I G
Sbjct: 395 VIVTCGPYFANDKVSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 454
Query: 408 -TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DIQ 461
T + DE+F L+ ++ + ++ +L+PS +DA NH PQ +Q
Sbjct: 455 KTQPKTLDELF----LKLFTPILKTISPHIQTVLIPSTKDAISNHA-AYPQASLIRKALQ 509
Query: 462 PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
P + NP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 LPK--KNFKCMANPSSFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVSE 562
Query: 522 SLMGPAFFFYPLYPPAEGI---PLDFSLAQEA------------------LTISTI---- 556
++ +YP++P + P D S +E L +S +
Sbjct: 563 HILQQR-RYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTE 621
Query: 557 ------PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPGR + G+ G++A+I
Sbjct: 622 FVGGFSPDIMIIPSELQHFARVV-----------QNVVVINPGRFIRATGNRGSYAQI 668
>gi|392566032|gb|EIW59208.1| DNA polymerase alpha subunit B [Trametes versicolor FP-101664 SS1]
Length = 530
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 203/471 (43%), Gaps = 106/471 (22%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD-----G 259
R+MY++ +R L++RI + + EE DP+ ++ + VG I D G
Sbjct: 88 RYMYEKVSERSEVLDDRIDHFGELVKAYYDVEELGDPSAVTEEEVTVVGRIVHDAESSSG 147
Query: 260 DGHLNDKSVLLQSSVEHSGGQRV----------RLDLHKLGEFSLFPGQVVGIEGSNPSG 309
LN+ S++L+SS G RV R + G +FPG +V ++G N G
Sbjct: 148 SVKLNEASLVLESSRMMGSGARVPLRFDADVKVRRGVRNGGGQGMFPGAIVALKGKNGGG 207
Query: 310 HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
++++ PL PS + E T SM IA GPFT +
Sbjct: 208 GSFYVTEILSLPPL--------DPSSGVQVKSETAET-------HFSMFIACGPFTPEAD 252
Query: 370 LYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYV 429
L + PL+ L+S K +P +++L GPF+D+ HP IK G D++ E+F E++ RL++++
Sbjct: 253 LAYRPLQNLVSKLKEAKPAVVLLTGPFIDATHPAIKVGDVDATPREMFQAELVNRLREFL 312
Query: 430 EYM-GSEVRAILVPSIRDANHDF-VLPQPPFDIQPPDII---HQITSLTNPGTFEANQIK 484
+ GS + +LVPS RD D V PQ + P + +I L NP F N +
Sbjct: 313 DASPGSTI--LLVPSTRDILSDHAVFPQ----CELPRALCNDARIRLLPNPARFTLNGVH 366
Query: 485 VGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFF------------FYP 532
V ++DVL L EE + + + + S + GP FYP
Sbjct: 367 VAASSIDVLFHLRKEEFFKRAAEVDPQSQSPASSPE----GPDAMANLCRHILQQRSFYP 422
Query: 533 LYPPAEGIPLDFS---------------------------LAQ-EALTISTIPDIIILPS 564
++P +PLD + AQ + PD++++PS
Sbjct: 423 IFP----VPLDLAHDVNLDVTHSDMMYLCPQEDESEEDDVDAQDDPARARCAPDVLVVPS 478
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYY--HGSP 613
+K+F KV+ V VNP L K T+A + Y HG+P
Sbjct: 479 RLKHFSKVVD-----------NTVAVNPSFLTK----ATYAVLEYAGHGAP 514
>gi|336269555|ref|XP_003349538.1| hypothetical protein SMAC_03126 [Sordaria macrospora k-hell]
gi|380093387|emb|CCC09045.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 666
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 199/436 (45%), Gaps = 68/436 (15%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSV 274
L++RI ++ +E + A Q T + AVG I D +G LN S++L++S
Sbjct: 226 LDDRIDDFTTLVLQHHKLDESAVGSAAMQSTTEIVAVGRIASDSSEGKLNAASLVLETSR 285
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPS 334
GG RV L++ KL + FPGQ+V + G+N +G ++++ ++PL ++A +
Sbjct: 286 RMGGGFRVPLNVSKLRGYQFFPGQIVALRGTNTTGREFTVNEVL-RMPLMLNAASTLETM 344
Query: 335 MKQ---------ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
A+D + + P +++I A+GP+T DNL FEPL LI+ A
Sbjct: 345 AAHRNRLRGGPDAMDTDDEN------PIPLNVIFASGPYTADDNLDFEPLHTLINEAADT 398
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGS 434
+IL GPF+D+EHP I G D ++ +F I L V
Sbjct: 399 YADAVILAGPFIDAEHPLIASGDFDLPEEAVYDPDAATMSTVFKYLISPALNRLVS-ANP 457
Query: 435 EVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
V +LVPS+RD + PQ F + + + + NP T N+ VG + D L
Sbjct: 458 NVTILLVPSVRDVIDRHVSWPQDAFPRKELGLHKSVKIIGNPMTLSLNETVVGISSQDAL 517
Query: 494 KQLSGEEMSRCSKDGTSN-DRMEIYSLDISLMGPAFFFYPLYPP---------------- 536
+L EE+ S + T+ R+ Y ++ ++PL+PP
Sbjct: 518 WELKHEELIGGSVEDTNGLSRVARYLIE------QRHYFPLFPPTDRTKLPKTGRQVIDG 571
Query: 537 --AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGR 594
A G LD S + ++ PD++I+PS + F KV+ + + +NPG
Sbjct: 572 QAAPGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKVI-----------ESVLVINPGY 620
Query: 595 LAKGEGSGTFAEIYYH 610
L++ + +GT+A + +
Sbjct: 621 LSQRKRAGTYARMTLY 636
>gi|322801402|gb|EFZ22063.1| hypothetical protein SINV_03428 [Solenopsis invicta]
Length = 521
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 167/337 (49%), Gaps = 48/337 (14%)
Query: 267 SVLLQSSVEHSGGQR---VRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL 323
+V+L+ S G + LD + ++S+F GQ+V +E NP G L +L
Sbjct: 148 TVILEGSTRQKGAWSAPSIALDFRDVEQYSVFSGQIVAVEAINPVGDVLYVKELFTTSYA 207
Query: 324 PVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAK 383
P ++ P +K I++ +AAGPFT +N+ ++PL +L+
Sbjct: 208 PYPSI----PMIK----------------SRINIFVAAGPFTAFNNMNYQPLWDLMEKVA 247
Query: 384 RKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPS 443
+PQLLIL+GP ++ HP I+ T++ ++ E + IL ++ ++ + + ++V S
Sbjct: 248 SDEPQLLILIGPLLEYTHPDIQNNTSNDTYREQYE-TILTKI---MKMTRNRTQVVVVVS 303
Query: 444 IRDANHDFVLPQPPFDIQPPDIIH--QITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM 501
RDA ++ V P + I+ +++ + + +P + +K+G +VDV+K + EE+
Sbjct: 304 NRDAQNEPVYPTHAYTIKDRKLLNYSNLKVMPDPCILDVESLKIGITSVDVVKHIGREEI 363
Query: 502 SRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIII 561
S S DR+ + + G FYP+YPP E + +D L ++ + P ++I
Sbjct: 364 S-----NVSGDRLRRLANHVLSQGS---FYPVYPPDEDLNVDRELWEQHTFFNQQPHLLI 415
Query: 562 LPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
LPSDM+ F K ++ +C+ +NP R+ K
Sbjct: 416 LPSDMRCFCKTIN-----------ECMVLNPERMHKN 441
>gi|336473167|gb|EGO61327.1| hypothetical protein NEUTE1DRAFT_77266 [Neurospora tetrasperma FGSC
2508]
gi|350293573|gb|EGZ74658.1| DNA polymerase alpha, subunit B [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 68/436 (15%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSV 274
L++RI + ++ +E + A Q T + AVG + D +G LN S++L++S
Sbjct: 227 LDDRIDDFTSLVLEHYKLDESVFGSAAMQSTTEIVAVGRVASDTSEGKLNAASLVLETSR 286
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPS 334
+ GG RV L++ KL + FPGQ+V + G+N +G ++++ ++PL +A +
Sbjct: 287 KLGGGFRVPLNVSKLKGYQFFPGQIVALRGTNTTGREFTVNEVI-RMPLMGNAASTLETM 345
Query: 335 M---------KQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
+ A+D + + P +++I A+GP+T DNL FEPL LI+ A
Sbjct: 346 AAHRERLRGGQDAMDTDDEN------PMPLNVIFASGPYTADDNLDFEPLHTLINEAADT 399
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGS 434
+IL GPF+D+EHP I G D ++ +F I L V
Sbjct: 400 YADAVILTGPFIDAEHPLIASGDFDLPEEAVYDPDAATLSTVFKYLISPALNRLVS-ANP 458
Query: 435 EVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
V +LVPS+RD + PQ F + + I L NP T N+ VG + D L
Sbjct: 459 HVTILLVPSVRDVIDRHVSWPQDAFPRKELGLHKSIKILGNPMTLSLNETLVGISSQDAL 518
Query: 494 KQLSGEEMSRCSKDGTSN-DRMEIYSLDISLMGPAFFFYPLYPP---------------- 536
+L EE+ + + T+ R+ Y ++ ++PL+PP
Sbjct: 519 WELKHEELIGGTVEDTNGLSRVARYLIE------QRHYFPLFPPTDRTKLPKTGRQVIDG 572
Query: 537 --AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGR 594
A G LD S + ++ PD++I+PS + F KV+ + + +NPG
Sbjct: 573 QAALGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKVI-----------ESVLVINPGY 621
Query: 595 LAKGEGSGTFAEIYYH 610
L++ + +GT+A + +
Sbjct: 622 LSQRKRAGTYARMTLY 637
>gi|425772210|gb|EKV10621.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum Pd1]
gi|425777487|gb|EKV15659.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum PHI26]
Length = 657
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 196/426 (46%), Gaps = 60/426 (14%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSV 274
L++RI + A + ++ T + A Q T + AVG I D +G LN S++L++S
Sbjct: 230 LDDRIDEFATIFQAEFNSDDVTFGSAAIQSTSEIVAVGRIASDSLEGKLNPASLVLETSR 289
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL--PVDAVVDVH 332
G+RV L + + + FPGQ+V + G NPSG +++ IPL P +
Sbjct: 290 RTGAGRRVPLKVDSVPSVNFFPGQIVALRGINPSGEYFTVKEVL-PIPLLPPAASSAVAL 348
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
++ + LD + + ++++IAAGP+T DNL FEPL+EL A L+L
Sbjct: 349 DNINERLDGDANPP--------LNVMIAAGPYTADDNLDFEPLQELCQKAAENYADSLVL 400
Query: 393 LGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILV 441
+GPF+D EHP + G D ++ +F I L + S + ++V
Sbjct: 401 MGPFLDIEHPLLASGDFDLPDIKGLDPDTATLSIMFRHCISAPLARLAAAVPS-ITIVMV 459
Query: 442 PSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE 500
PS+RDA V PQ + + Q+ ++NP T N+ G C+ DVL +L EE
Sbjct: 460 PSVRDALSRHVSWPQEQLPKKDLGLPKQVRMVSNPVTLSFNECVFGMCSHDVLSELRREE 519
Query: 501 MSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEGIPLDF 544
+ +G R+ Y ++ F+PL PP A G +D
Sbjct: 520 VLHGRPAEGNLLTRLPKYLVEQR------HFFPLLPPTARSNLPKPGFEGGMATGAMVDL 573
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTF 604
+ + PDI+I+PS + F+KV+ + +NPG L+K +G++
Sbjct: 574 PYMKLGEWWNVRPDILIVPSMLPPFVKVVD-----------SVLVINPGTLSKRRAAGSY 622
Query: 605 AEIYYH 610
A++ H
Sbjct: 623 AQMAIH 628
>gi|358374849|dbj|GAA91438.1| DNA polymerase alpha/primase associated subunit [Aspergillus
kawachii IFO 4308]
Length = 642
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 201/435 (46%), Gaps = 56/435 (12%)
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG- 259
G + M R + L++RI + +E T + A+Q T + AVG I D
Sbjct: 210 GYKPMAMRLAEASEILDDRIDEFMALFEKQYGSDEITFGSAATQSTSEIVAVGRIASDSM 269
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
+G LN S++L++S G RV L L + + FPGQ+V + G N SG+ ++
Sbjct: 270 EGKLNTASLVLETSRRTGAGIRVPLKLESVPSANFFPGQIVALRGINASGNYFSVKEV-- 327
Query: 320 QIPLPVDAVVDVHPSMKQALDQE-IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
+P P+ + P+ ++ E I+ + + +++++AAGP+T DNL +EPL+E+
Sbjct: 328 -LPTPL-----LPPAASSVVNLETINQRLEDAGSAPLNVLVAAGPYTADDNLDYEPLQEI 381
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQD 427
A L+LLGPF+D EHP + G D + +F I LQ
Sbjct: 382 CRKAADSYADGLVLLGPFLDIEHPLLASGDFDLPEINGMDPDTVTLTTVFRHCISAPLQR 441
Query: 428 YVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVG 486
V + S + +LVPS+RDA V PQ + + Q+ ++NP T N+ +G
Sbjct: 442 LVAAVPS-ITIVLVPSVRDAVSKHVSWPQEQLPKKELGLPKQVRMVSNPVTLSLNETVIG 500
Query: 487 CCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP--------- 536
C+ DVL +L EE+ +G R+ Y ++ F P++P
Sbjct: 501 MCSHDVLYELRREEVIHGKPTEGNLLTRLPKYMIE------QRHFQPMFPTSSRDMLPRA 554
Query: 537 ----AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
A G +D S ++ + PD++I PS + F+KV+ +NP
Sbjct: 555 GTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVVD-----------SVTVINP 603
Query: 593 GRLAKGEGSGTFAEI 607
G L+K G+GT+A++
Sbjct: 604 GTLSKRRGAGTYAQM 618
>gi|295670609|ref|XP_002795852.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284937|gb|EEH40503.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
Length = 634
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 166/651 (25%), Positives = 261/651 (40%), Gaps = 122/651 (18%)
Query: 33 YNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFML--------------HLQNEQKEAI 78
+++ DL W+ Y L DE+T+ D G HL+N K +
Sbjct: 4 HSMSAQDLSYKWDAYCLKMGADETTLNLDTARGLKRDVQDALERESRVKSHLRNTDKRSA 63
Query: 79 IKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDK 138
+ P S M+ +D + +P D + + KA SS K
Sbjct: 64 VSVTPRAAANSRAVFGML---------DDFVPSPQDRDTKGGNGTATKRKAAFGNPSSSK 114
Query: 139 ----------------PSKLV---------TPFGRRTEKLVVKFNINNLPNTENGCIEHD 173
P +L+ TPF R V +N+ + I
Sbjct: 115 IGRAEMGMGSPADSKTPQRLLNGDLAGIQQTPFSERQNSGQVLETLNSHLSMAQVPIAPY 174
Query: 174 DENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTE---DRFNALENRIRKHANALV 230
E RIK L G +P + + +E DR + ++KH
Sbjct: 175 QE-------ARIKPTANTELKKFGY--KPMAMHLNEASEVLDDRIDEFMAIVQKH----- 220
Query: 231 SSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLH 287
GL ++ + A+Q T + AVG I D +G LN S++L++S G RV L +
Sbjct: 221 -HGL-DDTAFGSAANQSTKEIIAVGRIASDSMEGKLNTASLVLETSRRMGAGLRVPLKVD 278
Query: 288 KLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTV 347
L +PGQ+V + G N S +++ LP A V P + Q ++ +
Sbjct: 279 SLPSVQFYPGQIVALRGINASREYFTVFEVLSVPLLPPAATV---PEIIQKINGRLGGG- 334
Query: 348 VISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKG 407
+ ++++IA+GPFT DNL FEPL+ L A + LIL GPF+D EHP + G
Sbjct: 335 --DTEQVLNILIASGPFTADDNLDFEPLRTLCIKAANEYADALILTGPFLDLEHPLLASG 392
Query: 408 TTD-----------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQ 455
D +S +F I L V + S + L+PS+RDA V PQ
Sbjct: 393 DFDLPEIKGLDPDTASLSALFRHCISAPLHQLVSAVPS-ISIFLIPSVRDAVSKHVSWPQ 451
Query: 456 PPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRM 514
+ + Q ++TNP T N+ G C+ DVL +L EE ++ +G R+
Sbjct: 452 EMLPKKELGLPRQARTVTNPVTLSLNENVFGMCSHDVLYELRQEEVLAGKPSEGGLLTRL 511
Query: 515 EIYSLDISLMGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDI 559
Y ++ F+P++PP A G LD S + + PD+
Sbjct: 512 SRYLIE------QRHFFPVFPPTSRENLPKSGLEGSIATGAMLDTSYLKLGEWWNVRPDV 565
Query: 560 IILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+I PS + F+KV+ EG + +NPG L+K + G++A++ H
Sbjct: 566 LITPSVLPPFVKVV------EG-----VLVINPGTLSKRKAPGSYAQMGLH 605
>gi|310794290|gb|EFQ29751.1| DNA polymerase alpha/epsilon subunit B [Glomerella graminicola
M1.001]
Length = 659
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 186/399 (46%), Gaps = 55/399 (13%)
Query: 243 VASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQV 299
A+Q T + AVG I D +G LN S++L+ S GG RV L++ G +S FPGQV
Sbjct: 251 AANQSTTEVIAVGRIASDAPEGKLNAASLVLEMSRRVGGGLRVALNMRNKG-YSFFPGQV 309
Query: 300 VGIEGSNPSGHCLIASKLVDQIPLP----VDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
V ++G N SG+ ++++ LP AV+ H + L + + S P +
Sbjct: 310 VALKGINTSGNEFAVEEVLEVPLLPNAASTPAVLAAH---RDRLRGDPDAMDTDSDPPPL 366
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD----- 410
+++ A+GP+T DNL FEPL L A L+L GPF+DSEHP I G D
Sbjct: 367 NVVYASGPYTADDNLDFEPLYALCDQAADTYADALVLTGPFIDSEHPLIATGDFDLPDEA 426
Query: 411 ------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPP 463
++ +F L V S + +LVPS+RD V PQ +
Sbjct: 427 AIDQDTTTMSTVFKYMFSPALNRLVSANPS-ITILLVPSVRDVIDKHVSWPQDSVLKKEL 485
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISL 523
+ +TNP T N++ +G + DVL QL EE+ G +D + L L
Sbjct: 486 GLPKTARIVTNPMTLSMNEMVMGISSQDVLWQLRHEELV----GGRPSDPALLSRLSRYL 541
Query: 524 MGPAFFFYPLYPPA-----------EGIP----LDFSLAQEALTISTIPDIIILPSDMKY 568
+ FF PL+PP EGIP LD S + ++ PD++++PS +
Sbjct: 542 LEQRHFF-PLFPPTDRPKLPKTGTEEGIPPGAMLDLSYLKLGEMVNVRPDVLVVPSFLPP 600
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
F KV+ + + +NPG L+K G+GT+A +
Sbjct: 601 FAKVV-----------ESVLMINPGYLSKRRGAGTYARL 628
>gi|326472630|gb|EGD96639.1| DNA polymerase alpha/primase associated subunit [Trichophyton
tonsurans CBS 112818]
gi|326483559|gb|EGE07569.1| DNA polymerase subunit alpha B [Trichophyton equinum CBS 127.97]
Length = 664
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 180/399 (45%), Gaps = 61/399 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++L++S G RV L + KL + FPGQ+V +
Sbjct: 265 STREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALR 324
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG + D + +P+ + PS +A ++++ S + ++ + AAGP
Sbjct: 325 GINASGEYFT---VFDVLTIPLLPLPVSLPSEVEATNEKLDSF----GDQPLNYMFAAGP 377
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FE L L A + LIL GPF+D EHP I G D ++
Sbjct: 378 YTTDDNLAFEALNTLCEKAAEECVDALILTGPFIDLEHPLIAAGDFDLPELKGLDPDTAT 437
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDII 466
+F I R L + + IL+PS+RDA V LP+ + P
Sbjct: 438 LTTLFKHCISRPLTQLASKV-PNIYIILIPSVRDAVSKHVSWPQEILPKKELGLPP---- 492
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
Q +TNP N+I VG C D L +L EE+ G ++ S +
Sbjct: 493 KQAKVVTNPVAISLNEIMVGLCASDSLYELRREEVV-----GGRPSESDLLSRLPRYLIE 547
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTI---------------PDIIILPSDMKYFIK 571
F P++PP L S +E L I ++ PDI+I PS + F+K
Sbjct: 548 QRHFSPVFPPTARENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILITPSVLPGFVK 607
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ + + +NPG+L+K G GT+A++ H
Sbjct: 608 VV-----------ESVLVINPGKLSKRRGPGTYAQVAVH 635
>gi|401626719|gb|EJS44644.1| pol12p [Saccharomyces arboricola H-6]
Length = 706
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 190/419 (45%), Gaps = 86/419 (20%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++ VG I D D LN +S+ L++S G+RVRLDL ++ E S F
Sbjct: 286 DPTIQSQSEIYTVGRIVPDSPTYDKFLNPESLALETSRMGGVGRRVRLDLSQINELSFFL 345
Query: 297 GQVVGIEGSNPSG-HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
GQ+V ++G N +G + + S L IP P V H QE S + + +
Sbjct: 346 GQIVALKGKNANGDYFTVKSSL--PIPYPNSPVSTPHEL------QEYQSNL---QGSSL 394
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG------- 407
+I+ GP+ DN E L++ IS + +P +LI+ GPF+D HP I G
Sbjct: 395 KVIVTCGPYFADDNFSLELLQDFISRINSEAKPHVLIMFGPFIDITHPLIASGKLPNFPQ 454
Query: 408 --TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPF---DI 460
+ + DE+F L+ ++ + V+ IL+PS RDA NH PQ +
Sbjct: 455 FKSQPKTLDELF----LKLFTPILKTISPHVQVILIPSTRDAISNHA-AYPQASLIRKAL 509
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
Q P + +TNP +F+ N+I GC VD K ++ K GT++ R + +
Sbjct: 510 QLPK--NNFKCVTNPASFQINEIYFGCSNVDTFK-----DLKEVIKGGTTSSRYRLDRVS 562
Query: 521 ISLMGPAFFFYPLYPPA------------------------------EGIPLDFS-LAQE 549
++ +YP++P + G LD S L
Sbjct: 563 EHILQQR-RYYPIFPGSIRTRIKSNSTSVKNEVNNTKNSEKKVYEHISGADLDVSYLGLT 621
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
PDI+I+PS++++F +V+ + V +NPG+ + G+ G++A+I
Sbjct: 622 EFVGGFSPDIMIIPSELQFFARVV-----------QNVVVINPGKFIRATGNRGSYAQI 669
>gi|366988531|ref|XP_003674032.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
gi|342299895|emb|CCC67651.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
Length = 679
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 198/421 (47%), Gaps = 74/421 (17%)
Query: 222 IRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD---GDGHLNDKSVLLQSSVEHSG 278
I+KH N S + +DPT+ SQ ++AVG + D +G LN +S+ L++S
Sbjct: 262 IQKHFNLSPS-----QFSDPTIQSQSEIYAVGRVVPDSPNAEGRLNTESLALETSRVMGI 316
Query: 279 GQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQI-PLPVDAVVDVHPSMKQ 337
G+RVRLDL K+ E S+F GQ+V ++G N +G LVD+I PLP +P
Sbjct: 317 GRRVRLDLKKVEELSMFSGQIVALKGKNANGEYF----LVDEILPLP-------YPDAPV 365
Query: 338 ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPF 396
+ ++EI + E + +II +GP+ D++ + L + ++ +P +LI+ GPF
Sbjct: 366 STEEEISESQESLEAESMKVIITSGPYFAEDSINTDLLLDFVNRLNNDIKPHVLIMFGPF 425
Query: 397 VDSEHPQIKKGTTDS---------SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA 447
+D +P I KG+ S + DEIF ++ + + + ++ IL+P RDA
Sbjct: 426 IDVTNPLIAKGSIPSFPNLKIQPKTLDEIF----IKVITPILRTINPLIQVILIPCTRDA 481
Query: 448 -NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSK 506
+ PQ FD + + +NP TF+ N+ GC +D+ K ++ +K
Sbjct: 482 ISKHASYPQDSFDRKYLQLPKNFKCFSNPSTFQLNEAFFGCSNIDIFK-----DLVETTK 536
Query: 507 DGT--SNDRMEIYSLDISLMGPAFFFYPLYPPA----------------EGIPLDFS-LA 547
G S DR + S I +YPL+P G L+ L
Sbjct: 537 GGLTFSRDRFDRISEHILQQRR---YYPLFPGKTREILASKEKKIYKHIAGADLEIPYLG 593
Query: 548 QEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAE 606
+ PD++I PS++ F +V+ + V +NPGR K +G GTFA+
Sbjct: 594 LTEFVGNVAPDVMIFPSELPCFARVV-----------QNVVIINPGRFIKHKGGRGTFAQ 642
Query: 607 I 607
+
Sbjct: 643 L 643
>gi|367015348|ref|XP_003682173.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
gi|359749835|emb|CCE92962.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
Length = 666
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 187/418 (44%), Gaps = 66/418 (15%)
Query: 240 DPTVASQRTLFAVGMICCDG--DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
DPT+ +Q + AVG I + D +N +S+ L++S G+RVRL+L + E SLF G
Sbjct: 259 DPTIQAQSEIHAVGRIVPESPSDESVNTESLALETSRMAGIGRRVRLNLTDVNEVSLFLG 318
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
Q+V ++G N G A++ +PLP +P + EI + + + +
Sbjct: 319 QIVAVKGKNADGDSFKATEF---LPLP-------YPESPVSTADEIQTHQKALNGDPLKV 368
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGT-------- 408
+ GPFT+ D+ F L + + +P LI+ GP +D HP I GT
Sbjct: 369 TVITGPFTSNDSFDFSHLTNFVERLNTEIKPHALIMFGPLIDVTHPMIAAGTLPHFPHLK 428
Query: 409 -TDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDII 466
+ D++F L+ + ++ + S ++ IL+PS RDA + PQ D + +
Sbjct: 429 SQPQTLDDLF----LKVMAPILKNIRSNIQVILIPSTRDALSKHAAYPQDSLDRKALQLP 484
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
NP TF+ N++ GC VD K + +EM + + + DR + S I
Sbjct: 485 KNFKCFANPATFQLNEVFFGCSNVDTFKDI--KEMPKGG-NTSMRDRFDRVSEHILQQR- 540
Query: 527 AFFFYPLYPPA-------------------EGIPLDFS-LAQEALTISTIPDIIILPSDM 566
+YP++P G LD L + PDII++PS+M
Sbjct: 541 --RYYPVFPGGITKKLLPNTEGGNKVYEHISGADLDVPYLGLTEFVGNFTPDIILIPSEM 598
Query: 567 KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG-SGTFAEIYYHGSPEMMNASIISI 623
+F KV ++ + +NPGR K G GT+A+I +P++ N + I
Sbjct: 599 NHFAKV-----------EQNVIMINPGRFVKPWGHQGTYADISI-SAPDLDNGKLTKI 644
>gi|50287459|ref|XP_446159.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525466|emb|CAG59083.1| unnamed protein product [Candida glabrata]
Length = 661
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 203/465 (43%), Gaps = 78/465 (16%)
Query: 185 IKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPT----D 240
++T K S+ + + R M + +D + L+ +I + G Y+ T D
Sbjct: 196 VETATKVSIAPYFDAKKYKFRTMRQKIQDAADVLDEQIEAFHELI--KGHYKLSTTDFAD 253
Query: 241 PTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
PTV SQ ++A+G + D +G N ++ L++S G+R+RLDL + E SLF G
Sbjct: 254 PTVQSQSEIYAIGRVVPDSALSEGFPNIDAIALETSRNQGIGRRIRLDLEHVSETSLFLG 313
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
Q+V I+G N +G K+ + + LP +P + EI + +
Sbjct: 314 QIVAIKGKNATGEYF---KVEEVLSLP-------YPDSPVSTANEIQEVQLSMDNAPMKA 363
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG--------- 407
+I AGP+T D F L + + +P +++ GPF+D IK+
Sbjct: 364 VITAGPYTADDKWDFSILSDFVDRINSDIKPHTIVMFGPFLDITQSCIKEANIPQFPNMK 423
Query: 408 TTDSSFDEIFH---LEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPP 463
T + DE+F+ + IL+R+ S ++ +L+PS RD + PQ FD +
Sbjct: 424 TQPKTLDEVFYKVVVPILKRID-------SNIQVVLLPSTRDVLSRHAAYPQDSFDRKML 476
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISL 523
+ NP TF+ N++ VGC VD+ K +M +K G+++ R + +
Sbjct: 477 QLPRNFKCFPNPSTFQLNEVFVGCSNVDIYK-----DMKEITKGGSTSMRNRFDRVSEHV 531
Query: 524 MGPAFFFYPLYPPAEGIPLDFS--------------------LAQEALTISTIPDIIILP 563
+ +YP++P L F L PDII++P
Sbjct: 532 LQQR-RYYPVFPGGLKKSLKFKDKTGKNIYEHISGADLDVPYLPLTEFVGGFAPDIIVIP 590
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG-SGTFAEI 607
S++++F +V+ + V +NPGR +G +GTF ++
Sbjct: 591 SELQHFARVV-----------RNVVFINPGRFVLAKGVNGTFVQL 624
>gi|380482927|emb|CCF40930.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 659
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 187/399 (46%), Gaps = 55/399 (13%)
Query: 243 VASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQV 299
A+Q T + AVG I D +G LN S++L+ S GG R+ L++ G +S FPGQV
Sbjct: 251 AANQSTTEVIAVGRIASDAPEGKLNAASLVLEMSRRVGGGLRIPLNMRNKG-YSFFPGQV 309
Query: 300 VGIEGSNPSGHCLIASKLVDQI----PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
V ++G N SG+ + ++++ A + H ++ L + + S P +
Sbjct: 310 VALKGINTSGNEFVVEEVLEVPLLPNAASTPAALIAH---REKLRGDPDAMDTDSEPAPL 366
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD----- 410
++I +GP+T DNL FEPL+ L A K L++ GPF+DSEHP I G D
Sbjct: 367 NIIYVSGPYTADDNLDFEPLQALCDQAADKYADALVMTGPFIDSEHPLIATGDFDLPEEA 426
Query: 411 ------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPP 463
++ +F L V S + +LVPS+RD V PQ +
Sbjct: 427 AIDPDSATMSAVFKYMFSPALNRLVSANPS-ITVLLVPSVRDVIDKHVSWPQDSVLKKEL 485
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISL 523
+ +TNP T N++ +G + D+L QL EE+ G +D + L +
Sbjct: 486 GLPKTARIVTNPMTLSMNEMVMGISSQDILWQLRHEELV----GGRPSDPSLLSRLSRHM 541
Query: 524 MGPAFFFYPLYPPA-----------EGIP----LDFSLAQEALTISTIPDIIILPSDMKY 568
+ FF PL+PP EGIP LD S + ++ PD++++PS +
Sbjct: 542 LEQRHFF-PLFPPTDRPKLPKTGTEEGIPPGAMLDLSYLKLGEMVNVRPDVLVVPSFLPP 600
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
F KV+ + + +NPG L+K G+GT+A++
Sbjct: 601 FAKVV-----------ESVLVINPGYLSKRRGAGTYAQL 628
>gi|302662659|ref|XP_003022981.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
gi|291186956|gb|EFE42363.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
Length = 469
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 180/399 (45%), Gaps = 61/399 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++L++S G RV L + KL + FPGQ+V +
Sbjct: 70 STREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALR 129
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG + D + +P+ + PS +A ++++ S + ++ + AAGP
Sbjct: 130 GINASGEYF---TVFDVLAIPLLPLPVSLPSEVEATNEKLDSF----GDQPLNYMFAAGP 182
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FE L L A + LIL GPF+D EHP I G D ++
Sbjct: 183 YTTDDNLAFEALNALCEKAAEECVDALILTGPFIDLEHPLIAAGDFDLPELKGLDPDTAT 242
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDII 466
+F I R L + + IL+PS+RDA V LP+ + P
Sbjct: 243 LTTLFKHCISRPLTQLASKV-PNIYIILIPSVRDAVSKHVSWPQEILPKKELGLPP---- 297
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
Q +TNP N+I VG C D L +L EE+ G ++ S +
Sbjct: 298 KQAKVVTNPVAISLNEIMVGLCASDSLYELRREEVV-----GGRPSESDLLSRLPRYLIE 352
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTI---------------PDIIILPSDMKYFIK 571
F P++PP L S +E L I ++ PDI+I PS + F+K
Sbjct: 353 QRHFSPVFPPTARENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILITPSVLPGFVK 412
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ + + +NPG+L+K G GT+A++ H
Sbjct: 413 VV-----------ESVLVINPGKLSKRRGPGTYAQVSVH 440
>gi|403217008|emb|CCK71503.1| hypothetical protein KNAG_0H00880 [Kazachstania naganishii CBS
8797]
Length = 672
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 194/405 (47%), Gaps = 69/405 (17%)
Query: 240 DPTVASQRTLFAVGMICCD---GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ SQ ++AVG I D +G LN++S+ L++S + G+R+RL L + + SLF
Sbjct: 263 DPTIQSQNVIYAVGRIVPDSPSAEGFLNEQSLSLETSRLNGIGRRIRLKLDNISDTSLFV 322
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V ++GSN +G + ++D +P P DA V + +++I+ + E
Sbjct: 323 GQIVALKGSNANGEAFLVEDILD-MPYP-DAPV--------STEEDINLYKNSLKGESAK 372
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDS---- 411
+++ AGP+ ++L L + + + +P ++I+ GPF+D + I +G +
Sbjct: 373 IVVTAGPYFPDNSLDISYLSDFVERVNNESKPHIVIMYGPFIDVTNSMIMEGRIPTFPHL 432
Query: 412 -----SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD--ANHDFVLPQPPFDIQPPD 464
+ DE+F +L L++ + +++ IL+PS RD +NH PQ FD +
Sbjct: 433 KVQPRTLDELFTRLVLPILKN----INPKIQVILIPSTRDVSSNHS-SYPQDSFDRKGLQ 487
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLM 524
+ TNP TF+ N+ GC D+ K +M K G + R + ++
Sbjct: 488 LPKNFKCFTNPSTFQLNETFFGCSNADIFK-----DMKEILKGGDISMRNRFDRIAEHML 542
Query: 525 GPAFFFYPLYP--------PAE------------GIPLDFS-LAQEALTISTIPDIIILP 563
FYP++P PA+ G+ L+ S L + PD+I++P
Sbjct: 543 QQR-RFYPVFPGSLRSITVPAKNENSKKIHKHISGVDLEVSYLGLTEFVGNFAPDVIMVP 601
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
SDM F +V+ K V +NPG+ K G+ GT A+I
Sbjct: 602 SDMSPFARVV-----------KNVVFINPGKFVKARGARGTHAQI 635
>gi|307166257|gb|EFN60471.1| DNA polymerase subunit alpha B [Camponotus floridanus]
Length = 308
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 46/319 (14%)
Query: 282 VRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQ 341
+ LD L ++S+F GQ+V +E +NP G L +++ + P + P ++
Sbjct: 5 IELDFRNLKQYSVFSGQIVAVEATNPIGDALYVNQIFAKAYAPSASA----PRLES---- 56
Query: 342 EIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEH 401
+I++ +AAGPFT N ++PL +L+ +P +LIL+GPF++ H
Sbjct: 57 ------------KINIFVAAGPFTALSNTLYQPLWDLMEKIASDEPHVLILVGPFLEYTH 104
Query: 402 PQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ 461
P+++ + E F +IL R+ +E + +LV S RDA+H+ + P P + +
Sbjct: 105 PEVQNNLIRDTHQEFFE-KILTRI---MESTKKNTQVVLVASNRDAHHEPIFPTPEYAVF 160
Query: 462 PPDIIHQITSLT---NPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
++ +L +P + +K+G +VDV+K + EE+S + D R+ +
Sbjct: 161 NKKLLQNYRNLKLMPDPCILDVAGLKIGVTSVDVIKHIGKEEISNVTGDRLG--RLADHV 218
Query: 519 LDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGR 578
L + FYP+YPP E + +D L ++ P ++ILPSDM+ + KV++
Sbjct: 219 LAQTC------FYPVYPPFEDLNVDTDLWEKHAFFDQQPHVLILPSDMRCYCKVIN---- 268
Query: 579 NEGEEQKKCVCVNPGRLAK 597
+CV +NP R+ K
Sbjct: 269 -------ECVTLNPERMHK 280
>gi|116198853|ref|XP_001225238.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
gi|88178861|gb|EAQ86329.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
Length = 657
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 186/407 (45%), Gaps = 61/407 (14%)
Query: 244 ASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVV 300
ASQ T + AVG I D +G LN S++L+SS G RV L+L KL + FPGQ+V
Sbjct: 244 ASQGTAEIVAVGRIASDSPEGKLNAASLVLESSRRLGNGLRVPLNLSKLQGYQFFPGQIV 303
Query: 301 GIEGSNPSGHCLIASKLVDQIPLPVDAVVD-----VHPSMKQALDQEIHSTVVISRPEEI 355
+ G N SG +++D IPL +A D H + + + S + P +
Sbjct: 304 ALRGINTSGRDFTVHQVLD-IPLLPNAASDPDTLASHLARLRGGPDAMDSD--DTPPPPL 360
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD----- 410
+++ A+GP+T DNL FEPL L S A ++L GPF+D+EHP + G D
Sbjct: 361 TILFASGPYTADDNLDFEPLHTLCSEAADIYADAVVLTGPFLDAEHPLLAAGDFDLPPEA 420
Query: 411 ------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPP 463
+S +F + L + + +LVPS+RD V PQ F +
Sbjct: 421 SYNADTASMSTVFKYLVTPAL-NRLAASNPSATVLLVPSVRDVLAKHVSWPQDAFPRREL 479
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM-SRCSKDGTSNDRMEIYSLDIS 522
+ + + NP T N++ +G + DVL QL EE+ G + R+ Y ++
Sbjct: 480 GLHKAVRIIGNPMTLSMNEMVLGVSSQDVLWQLRHEELVGGAGSAGDALSRLSRYLVE-- 537
Query: 523 LMGPAFFFYPLYPPAE--GIP-----------------LDFSLAQEALTISTIPDIIILP 563
F+PL+P + +P LD S + + PD++++P
Sbjct: 538 ----QRHFFPLFPAVDRKRLPKTGAVDGAGGGVPPGAMLDVSYLKLGEMVEVRPDVLVVP 593
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
S M F KV+ + +NPG L+K +G+GT+A++ +
Sbjct: 594 SAMPPFAKVVD-----------SVLAINPGSLSKRKGAGTYAKMTLY 629
>gi|406866827|gb|EKD19866.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 668
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 183/404 (45%), Gaps = 54/404 (13%)
Query: 242 TVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+ ASQ T + AVG I D G LN S++L++S G R+ L++ L F FPGQ
Sbjct: 255 SAASQSTNEVVAVGRIASDSLSGKLNASSLVLETSRRMGAGLRIPLNVTSLSGFKFFPGQ 314
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIH----STVVISRPEE 354
+V ++G N SG ++++ LP A P++ ++ Q + + S P
Sbjct: 315 IVAMKGINASGDNFAVREVLEAPLLPGAAS---PPALLESHIQRLRGGPDAMDSDSEPAP 371
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD---- 410
+S++I +GP+T DNL FEPL L S A LIL GPF+D +HP I G D
Sbjct: 372 LSIMIGSGPYTADDNLDFEPLHALCSQAADTYADALILTGPFLDIDHPLIATGDFDLPEE 431
Query: 411 -------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQP 462
++ +F I L + V +L+PS++D V PQ F +
Sbjct: 432 AMTEPDTATMTTLFKYLISPALI-RLAAANPHVTILLIPSVKDVISKHVSWPQEAFPRKD 490
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC-SKDGTSNDRMEIYSLDI 521
+ + + NP N++ VG + DVL +L E + +++ R+ Y L+
Sbjct: 491 LGLPKAVRIVGNPIIISLNEVAVGISSQDVLTELRSSETAEGRARETPILSRLSSYLLE- 549
Query: 522 SLMGPAFFFYPLYPP-----------AEGIP----LDFSLAQEALTISTIPDIIILPSDM 566
F+P++PP A GIP LD S + + PD++ILPS +
Sbjct: 550 -----QRSFFPIFPPLDRASLPKSGTASGIPTGAMLDTSYLKLGEMVRVRPDVLILPSAL 604
Query: 567 KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ F K + G V +NPG ++K GTFA + H
Sbjct: 605 QPFSKRQVVEG---------VVVINPGHVSKRRAPGTFARLTVH 639
>gi|395330969|gb|EJF63351.1| DNA polymerase alpha, subunit B [Dichomitus squalens LYAD-421 SS1]
Length = 605
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 203/459 (44%), Gaps = 91/459 (19%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGL-YEEPTDPTVASQRTLFAVGMICCD-----G 259
+MY++ +R L++RI H L+ EE DP ++ + VG + D G
Sbjct: 164 YMYEKVSERSEVLDDRI-DHIGELIKDYYNVEELGDPAAVTEEEVIVVGRVVLDAESSAG 222
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDL----------HKLGEFSLFPGQVVGIEGSNPSG 309
LN+ S++L+SS G RV+L LG LFPG +V ++G N G
Sbjct: 223 SVKLNEASLMLESSRMMGSGARVQLRFDPNVKVRKGKQGLGGQGLFPGAIVALKGKNGGG 282
Query: 310 HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
+A++++ PL P + E T +M +A GPFT+ +
Sbjct: 283 GAFLATEILSLPPL--------DPPAAALIKSETGDT-------HFTMHVACGPFTSDGD 327
Query: 370 LYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYV 429
L + PL+ LI+ K +P + +L+GPF+D+ HP IK G DS+ E F EI+ RL+D++
Sbjct: 328 LQYRPLQTLIAKLKAAKPAVTLLVGPFIDASHPSIKIGDVDSTPTETFRTEIVDRLRDFL 387
Query: 430 EYMGSEVRAILVPSIRDANHDF-VLPQPPFD-IQPPDIIHQITSLTNPGTFEANQIKVGC 487
E + +L+PS RD D V PQP + D +I L NP F N +
Sbjct: 388 ESSPGSI-VLLLPSTRDIVSDHAVFPQPELSGMLCTD--SRICLLPNPARFTVNGLHFAA 444
Query: 488 CTVDVLKQLSGEEMSRCSKD-----GTSNDRMEIYSLDISLMGPAFF----FYPLYPPAE 538
+VDVL L EE + + + G ++ + S ++ + FYP++P
Sbjct: 445 SSVDVLFHLRKEEFFKRAAEIEPLAGPADPEGQAPSDGMANLCRHVLQQRSFYPIFP--- 501
Query: 539 GIPLDFSL-----------------------AQEALTIST---IPDIIILPSDMKYFIKV 572
+PLD + A+ A+ S PD++I+PS +K+F K+
Sbjct: 502 -VPLDLAHEINLDVTHSDLLHLVPQDEDAEDAEGAVDPSRARCAPDVLIVPSRLKHFSKI 560
Query: 573 LSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHG 611
+ V +NP L K T+A + Y G
Sbjct: 561 VD-----------NTVAINPSFLTK----STYAVLEYAG 584
>gi|302497329|ref|XP_003010665.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
gi|291174208|gb|EFE30025.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
Length = 469
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 180/399 (45%), Gaps = 61/399 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++L++S G RV L + KL + FPGQ+V +
Sbjct: 70 STREVVAVGRIASDSPEGKLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALR 129
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG + D + +P+ + PS +A ++++ S + ++ + AAGP
Sbjct: 130 GINASGEYF---TVFDVLTIPLLPLPVSLPSEVEATNEKLDSF----GDQPLNYMFAAGP 182
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FE L L A + LIL GPF+D EHP I G D ++
Sbjct: 183 YTTDDNLAFEALNALCEKAAEECVDALILTGPFIDLEHPLIAAGDFDLPELKGLDPDTAT 242
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDII 466
+F I R L + + IL+PS+RDA V LP+ + P
Sbjct: 243 LTTLFKHCISRPLTQLASKV-PNIYIILIPSVRDAVSKHVSWPQEILPKKELGLPP---- 297
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
Q +TNP N+I VG C D L +L EE+ G ++ S +
Sbjct: 298 KQAKVVTNPVAISLNEIMVGLCASDSLYELRREEVV-----GGRPSESDLLSRLPRYLIE 352
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTI---------------PDIIILPSDMKYFIK 571
F P++PP L S +E L I ++ PDI++ PS + F+K
Sbjct: 353 QRHFSPVFPPTARENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILVTPSVLPGFVK 412
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ + + +NPG+L+K G GT+A++ H
Sbjct: 413 VV-----------ESVLVINPGKLSKRRGPGTYAQVAVH 440
>gi|403415195|emb|CCM01895.1| predicted protein [Fibroporia radiculosa]
Length = 1294
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 194/443 (43%), Gaps = 80/443 (18%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD----GD 260
R+MY+ DR AL+ RI + E+ +DP+ A++ + VG I D G
Sbjct: 157 RYMYETVYDRSTALDRRIDDMGQLVKEHYGIEDLSDPSAATEEIVTVVGRIVHDLETSGG 216
Query: 261 GHLNDKSVLLQSSVEHSGGQRVRLDL----------HKLGEFSLFPGQVVGIEGSNPSGH 310
LN+ S++L+SS + G RV L +G FPG +V +G N G
Sbjct: 217 AKLNEASLVLESSRQMGSGVRVSLRFDPALQIRQARQGVGSIGFFPGAIVACKGKNGGGG 276
Query: 311 CLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNL 370
+ ++++ PLP + + S + S+ +A GPFT +L
Sbjct: 277 WFLVTEILTLPPLPPNPGIATGDSA-----------------DSFSICVACGPFTPDSDL 319
Query: 371 YFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFH--LEILRRLQDY 428
F K+L+ K ++P +L+L+GPF+D HP +K G D S ++FH ++L L+
Sbjct: 320 NFNSWKKLLDKVKVEKPTVLLLVGPFIDVNHPVVKNGEMDISAADMFHDKFQLLDFLKSS 379
Query: 429 VEYMGSEVRAILVPSIRDANHDF-VLPQPPFDIQ-PPDIIHQITSLTNPGTFEANQIKVG 486
+ M ++VPS+RDA D VLPQ PD ++ L NP F N +
Sbjct: 380 PDSM-----VLIVPSVRDAISDHAVLPQCELGSGFAPD--PRVLMLPNPCRFSLNGLSFA 432
Query: 487 CCTVDVLKQLSGEEMSR----------CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPP 536
+VDVL L EE + SK+ +ND M I FYPL+P
Sbjct: 433 ITSVDVLFHLRKEEFVKRAQEVDPIPSVSKEEHANDLMTNTCRHILQQRS---FYPLFPA 489
Query: 537 ----AEGIPLDFS------LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKK 586
+ + LD S + S PD++I PS +K+F+K +
Sbjct: 490 PYDLSHEVNLDVSHSGGLNICTGGAEASFAPDVLITPSRLKHFVKTVD-----------S 538
Query: 587 CVCVNPGRLAKGEGSGTFAEIYY 609
+ +NP +AK GT+A I Y
Sbjct: 539 SLAINPSSVAK----GTYAMITY 557
>gi|400600867|gb|EJP68535.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 681
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 182/401 (45%), Gaps = 52/401 (12%)
Query: 249 LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNP 307
+ AVG + D +G LN S++L++S G RV L + + +S+FPGQ+V + GSN
Sbjct: 269 IVAVGRVASDSPEGRLNAASLVLETSRRTGMGFRVPLRMDAIPAWSVFPGQIVALRGSNA 328
Query: 308 SGHCLIASKLVDQIPLPVDAV-----VDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAA 361
+G + +++ IPL +A + H + D + +P +SM+ AA
Sbjct: 329 TGDEFVVKEVL-AIPLLPNAASTGSALAAHEERMRVRDPDAMMDEDDEKPAPPLSMLYAA 387
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD----------- 410
GP+T DNL FEPL L + A +L+L GPF+D +HP + G D
Sbjct: 388 GPYTADDNLDFEPLHALCAEAADTYADVLVLTGPFLDVDHPLVATGDFDLPDEALGGSSG 447
Query: 411 ----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDI 465
++ +F + L V S V ILVPS+RD V PQ + +
Sbjct: 448 DADTATMTTVFRYLVAPALARLVAAHPS-VTVILVPSVRDVLDKHVSWPQDTIPRRELGL 506
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC-SKDGTSNDRMEIYSLDISLM 524
+ ++NP T N++ +G + D L +L EE+S+ + + ++ + +
Sbjct: 507 PRSVRIVSNPMTLSINELVLGVSSQDALWELRAEELSKVGAALSSGGGGGDLMARLCRHL 566
Query: 525 GPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYF 569
F+P+YPP A G LD S + ++ PD+++ PS + F
Sbjct: 567 VEQRHFHPVYPPTDRARLPRTGTAEGTATGAVLDVSYLKLGEMVNVRPDVLLTPSALPPF 626
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
KV+ + + +NPG L+K G+GT+A + H
Sbjct: 627 AKVV-----------ESVLAINPGYLSKRRGAGTYARMTLH 656
>gi|242003174|ref|XP_002422639.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
gi|212505440|gb|EEB09901.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
Length = 460
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 184/402 (45%), Gaps = 49/402 (12%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLND 265
+M++ D + + I K ++ EE VG I CDG+G L
Sbjct: 94 YMHNSLTDYLDYWNDNIEKIGKLIIGKYSLEEEMPMNHRGVTPFILVGRIACDGEGRLKS 153
Query: 266 KSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPV 325
K++LL+ + +++ G V LDL L ++S+FPGQVV E + + L+ +L L
Sbjct: 154 KNILLEGTSDNASGTSVDLDLSVLPKYSIFPGQVVAAEVYSLTKERLVVKQLYTDTNLNF 213
Query: 326 DAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
++ + +S+++A+GP+T +D++ ++PL +L+
Sbjct: 214 FKPYEL-------------TKGGGGGGGPLSVMVASGPYTPSDSMTYQPLLDLMKEVVNV 260
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIR 445
+P LIL GPF++S+HP + + ++ F +I+ ++ +E + ++V I++ S +
Sbjct: 261 EPHALILTGPFIESDHPVFSENMLAETMED-FLEKIMEKIMKPIERLKTQV--IIINSYK 317
Query: 446 DANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS 505
+ V P P ++ ++ +P F + + G + D G +SR +
Sbjct: 318 ELTSPMVFPTPEMILKCTKSYPKLHLFPDPCLFSLDDVVFGVTSTD-----DGGRLSRLA 372
Query: 506 KDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSD 565
K FYPL PA+ +PLD +L + + + P I+ILPSD
Sbjct: 373 KHILHQKS----------------FYPL-APAKDVPLDPTL-MDHVKLDVAPHILILPSD 414
Query: 566 MKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
++YFI+ + + V VNP RLAKG GT+A +
Sbjct: 415 LRYFIQ----------KVENCTVVVNPERLAKGLIGGTYARL 446
>gi|302307213|ref|NP_983797.2| ADL299Cp [Ashbya gossypii ATCC 10895]
gi|299788891|gb|AAS51621.2| ADL299Cp [Ashbya gossypii ATCC 10895]
Length = 645
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 202/440 (45%), Gaps = 75/440 (17%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGL---YEEPTDPTVASQRTLFAVGMICCD--G 259
R M R + L+ +I +H ++V L E DPT+ SQ ++ VG I D G
Sbjct: 207 RTMRQRLLGAADVLDEQI-EHFTSVVQKDLGISSAELGDPTIQSQSSIICVGRIVPDNPG 265
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
D +N +SV +++S G+R+RL+L + E+SLFPGQ+V + G N +G +L+
Sbjct: 266 DERINMESVSIETSRAAGIGRRIRLNLKSIKEYSLFPGQIVAMRGRNANGEFFKVEELL- 324
Query: 320 QIPL---PVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
Q P PV + ++ + + ALD ++ +++ +GP+T + ++ F L+
Sbjct: 325 QFPYLNSPVSSAEEIQEA-QLALDG-----------GQMKVLVTSGPYTPSTSIDFNHLE 372
Query: 377 ELISYAKRK-QPQLLILLGPFVDSEHPQIKKG---------TTDSSFDEIFH---LEILR 423
E I +P +LI+ GPF+D HP ++ G + + DE+F ILR
Sbjct: 373 EFILRVNEHIRPHVLIMFGPFLDVTHPLVETGQIPTFPNLKSQPRTLDELFTKILCPILR 432
Query: 424 RLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
++ ++ +L+PS+RDA + PQ F + + NP TF N+
Sbjct: 433 KIN-------PRIQVVLIPSMRDAISRHTSYPQDSFSRKELQLPKNFKCYANPATFRVNE 485
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP-PAEGIP 541
+ GC D+ K + + DR+ + L+ FYP +P A+
Sbjct: 486 LFFGCSNNDIFKDMKEVPNGPINLSKNRIDRVSEHILEQRR------FYPAFPGGAKTRT 539
Query: 542 LDFS-------------LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCV 588
+D S L IPDI+I+PS++K+F +V+ K +
Sbjct: 540 IDDSKEHVSGADLEVPYLGLTEFIGGFIPDIVIIPSELKHFARVV-----------KNVM 588
Query: 589 CVNPGRLAKGEGS-GTFAEI 607
+NPG + GS GT+A++
Sbjct: 589 VINPGAFVRARGSRGTYAQL 608
>gi|255954187|ref|XP_002567846.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589557|emb|CAP95703.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 657
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 200/425 (47%), Gaps = 58/425 (13%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSV 274
L++RI + A + ++ T + A Q T + AVG I D +G LN S++L++S
Sbjct: 230 LDDRIDEFATIFQAEFKSDDITFGSAAIQSTSEIIAVGRIASDSLEGKLNPASLVLETSR 289
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL--PVDAVVDVH 332
G+RV L + + + FPGQ+V + G NPSG +++ IPL P +
Sbjct: 290 RTGAGRRVPLKVDSVPSANFFPGQIVALRGINPSGEYFTVKEVL-PIPLLPPAASSAVAL 348
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
++ + LD + + ++++IAAGP+T DNL FEPL+EL A L+L
Sbjct: 349 DNINERLDGDANP--------PLNIMIAAGPYTADDNLDFEPLQELCQKAAESYADGLVL 400
Query: 393 LGPFVDSEHPQIKKGTTD----SSFD-EIFHLEILRR--LQDYVEYMGSEVRAI---LVP 442
+GPF+D EHP + G D + D + L I+ R + + + + V +I +VP
Sbjct: 401 MGPFLDIEHPLLASGDFDLPDINGLDPDTATLSIMFRHCISAPLARLAAAVPSITIVMVP 460
Query: 443 SIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM 501
S+RDA V PQ + + Q ++NP T N+ +G + DVL +L EE+
Sbjct: 461 SVRDAVSRHVSWPQEMILKKELGLPKQTRMVSNPVTLSFNECVIGMSSHDVLSELRREEV 520
Query: 502 SRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYPP---------------AEGIPLDFS 545
+G R+ Y ++ F+PL+PP A G +D
Sbjct: 521 LHGRPAEGNLLTRLPKYLVEQR------HFFPLFPPTARSNLPRPGTEGGMATGAMVDLP 574
Query: 546 LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFA 605
+ + PDI+I+PS + F+KV+ + +NPG L+K +G++A
Sbjct: 575 YMKLGEWWNVRPDILIVPSMLPPFVKVVD-----------SVLVINPGTLSKRRAAGSYA 623
Query: 606 EIYYH 610
++ H
Sbjct: 624 QMAVH 628
>gi|374107009|gb|AEY95917.1| FADL299Cp [Ashbya gossypii FDAG1]
Length = 645
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 201/440 (45%), Gaps = 75/440 (17%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGL---YEEPTDPTVASQRTLFAVGMICCD--G 259
R M R + L+ +I +H ++V L E DPT+ SQ ++ VG I D G
Sbjct: 207 RTMRQRLLGAADVLDEQI-EHFTSVVQKDLGISSAELGDPTIQSQSSIICVGRIVPDNPG 265
Query: 260 DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
D +N +SV +++S G+R+RL+L + E+SLFPGQ+V + G N +G +L+
Sbjct: 266 DERINMESVSIETSRAAGIGRRIRLNLESIKEYSLFPGQIVAMRGRNANGEFFKVEELL- 324
Query: 320 QIPL---PVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
Q P PV ++ + + ALD ++ +++ +GP+T + ++ F L+
Sbjct: 325 QFPYLNSPVSTAEEIQEA-QLALDG-----------GQMKVLVTSGPYTPSTSIDFNHLE 372
Query: 377 ELISYAKRK-QPQLLILLGPFVDSEHPQIKKG---------TTDSSFDEIFH---LEILR 423
E I +P +LI+ GPF+D HP ++ G + + DE+F ILR
Sbjct: 373 EFILRVNEHIRPHVLIMFGPFLDVTHPLVETGQIPTFPNLKSQPRTLDELFTKILCPILR 432
Query: 424 RLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
++ ++ +L+PS+RDA + PQ F + + NP TF N+
Sbjct: 433 KIN-------PRIQVVLIPSMRDAISRHTSYPQDSFSRKELQLPKNFKCYANPATFRVNE 485
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP-PAEGIP 541
+ GC D+ K + + DR+ + L+ FYP +P A+
Sbjct: 486 LFFGCSNNDIFKDMKEVPNGPINLSKNRIDRVSEHILEQRR------FYPAFPGGAKTRT 539
Query: 542 LDFS-------------LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCV 588
+D S L IPDI+I+PS++K+F +V+ K +
Sbjct: 540 IDDSKEHVSGADLEVPYLGLTEFIGGFIPDIVIIPSELKHFARVV-----------KNVM 588
Query: 589 CVNPGRLAKGEGS-GTFAEI 607
+NPG + GS GT+A++
Sbjct: 589 VINPGAFVRARGSRGTYAQL 608
>gi|169614421|ref|XP_001800627.1| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
gi|160707341|gb|EAT82686.2| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
Length = 671
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 190/427 (44%), Gaps = 52/427 (12%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD-GDGHLNDKSVLL 270
+D+ + IR+H N L S +P S L AVG I D +G LN +++L
Sbjct: 233 DDKIDEFRELIREHMN-LDESAF----GNPNYQSPSELIAVGRIASDTSEGKLNTAALVL 287
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD 330
+ S G+RV L++ L ++ FPGQ+V ++G+N SG + S+++ LP+
Sbjct: 288 EGSRRFGSGRRVPLNVDGLVSYNFFPGQIVALKGTNASGDAFVVSEVLS---LPLLNQPA 344
Query: 331 VHPSMKQALDQEIHSTVVISRPEE-------ISMIIAAGPFTTTDNLYFEPLKELISYAK 383
P A++ + PE ++M+IA+GP+TT NL F PL + A
Sbjct: 345 TKPDELDAINAR-----YLDSPEADPDNVRPLTMMIASGPYTTDQNLDFAPLHTFLDNAA 399
Query: 384 RKQPQLLILLGPFVDSEHPQIKKGTTD---------SSFDEIFHLEILRRLQDYVEYMGS 434
+IL+GPF+D+EHPQI+ G D ++ ++F I LQ + + + +
Sbjct: 400 EAYADSIILVGPFLDAEHPQIRTGDFDPPPNSSPDQATMTDLFRHHISTALQAFSKRVPT 459
Query: 435 EVRAILVPSIRDANHDF-VLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTV 490
ILVPS+RDA+H PQ F ++ + +TNP T N++ VG ++
Sbjct: 460 -CNVILVPSLRDAHHHHAAFPQDKFIKKELGLGAAGKMVQCVTNPMTLSMNEMTVGMSSI 518
Query: 491 DVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEG---IPLDFSLA 547
D+L L EE+ G + IY + F PL+PP IP ++
Sbjct: 519 DILDMLRREELVSEKSRG-----INIYERCARNVIEQRSFLPLFPPLARDKIIPPPAAVE 573
Query: 548 QEALTISTIPDII-------ILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG 600
+ + LP L LG E + +NPG LAK
Sbjct: 574 DQVYKNGEAEEAEEDEGPSPFLPLGTMLDTSYLKLGEMLNVVES--VIVINPGTLAKRRA 631
Query: 601 SGTFAEI 607
+GT+A +
Sbjct: 632 AGTYARV 638
>gi|164426754|ref|XP_961324.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
gi|157071464|gb|EAA32088.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
Length = 645
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 191/419 (45%), Gaps = 61/419 (14%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCD-GDGHLNDKSVLLQSSV 274
L++RI + ++ +E + A Q T + AVG + D +G LN S++L++S
Sbjct: 232 LDDRIDDFTSLVLEHYKLDESVFGSAAMQSTTEIVAVGRVASDTSEGKLNAASLVLETSR 291
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPS 334
+ GG RV L++ KL + FPGQ+V + G+N +G ++++ ++PL +A +
Sbjct: 292 KLGGGFRVPLNVSKLKGYQFFPGQIVALRGTNTTGREFTVNEVI-RMPLMGNAASTLETM 350
Query: 335 MKQ---------ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
A+D + + P +++I A+GP+T DNL FEPL I+ A
Sbjct: 351 AAHRERLRGGPDAMDTDDEN------PMPLNVIFASGPYTADDNLDFEPLHTFINEAADT 404
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTD-----------SSFDEIFHLEILRRLQDYVEYMGS 434
+IL GPF+D+EHP I G D ++ + +F I L V
Sbjct: 405 YADAVILTGPFIDAEHPLIASGDFDLPEEAVYDPDAATLNTVFKYLISPALNRLVS-ANP 463
Query: 435 EVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
V +LVPS+RD + PQ PF + + I L NP T N+ VG + D L
Sbjct: 464 HVTILLVPSVRDVIDRHVSWPQDPFPRKELGLHKSIKILGNPMTLSLNETLVGISSQDAL 523
Query: 494 KQLSGEEMSRCSKDGTSN-DRMEIYSLDISLMGPAFFFYPLYPP---------------- 536
+L EE+ + + T+ R+ Y ++ ++PL+PP
Sbjct: 524 WELKHEELIGGTVEDTNGLSRVARYLIE------QRHYFPLFPPTDRTKLPKTGRQVIDG 577
Query: 537 --AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPG 593
A G LD S + ++ PD++I+PS + F K+L+ R+ K C PG
Sbjct: 578 QAAPGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKLLTFLSRS----LKVCWSSTPG 632
>gi|242762029|ref|XP_002340296.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
gi|218723492|gb|EED22909.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
Length = 650
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 154/638 (24%), Positives = 264/638 (41%), Gaps = 87/638 (13%)
Query: 21 EVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNE-QKEAII 79
+VL + + + + P +L WE Y + D++ + D + F +Q+ ++E
Sbjct: 23 DVLTELQSMLRLHGITPQELFYKWESYSMKMGADDTKLDLDTVRAFKRDVQDSLERETRG 82
Query: 80 KEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDKP 139
K H+ ++ + A D+ G + D T ++ NG S+ +
Sbjct: 83 KNH---HVRGAEKKSGVTATPRAGKA-DVFG-------MLDDLTPGTPQSRING-SAKRK 130
Query: 140 SKLVTPFGRRTEKLVVKFNIN-NLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGS 198
S TP G + + P+T + + +++ +
Sbjct: 131 SNFETPSGPKVGRTDAGTPTGIKTPSTNIQSVAFAERQNPGQLLETLNAHLDMPKTPMVP 190
Query: 199 GPEPGCR---------FMYDRTEDRFNA----LENRIRKHANALVSSGLYEEPTDPTVAS 245
PEP R F Y R N L++R+ + + Y + + A+
Sbjct: 191 FPEPRIRPTANTDLKKFAYKPMSMRLNEASEILDDRLDEFTDLFEKQ--YPDVNFGSAAT 248
Query: 246 QRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGI 302
Q T + AVG I D +G LN S++L++S G RV L + L FPGQVV +
Sbjct: 249 QSTSEIVAVGRIASDSLEGKLNVASLVLETSRRTGAGLRVPLKVDALPSVQFFPGQVVAL 308
Query: 303 EGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAG 362
G N SG +++ LP+ P A+++++ V + +P +++ AAG
Sbjct: 309 RGINASGEYFSVKEVLS---LPLLPTAASSPDTLDAINEKLGG-VDVDQP--LNIFYAAG 362
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
P+T DNL FEPL+EL A + L+LLGPF+D EHP I G D +
Sbjct: 363 PYTADDNLDFEPLQELCKKAAEEYADALLLLGPFIDLEHPLIATGDFDLPDIPGLDPETA 422
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQIT 470
+ +F I + L + S + +L+PS+RD+ V PQ + + Q
Sbjct: 423 TLTTLFRHCISKPLHQLCAAVPS-ITIMLMPSVRDSVSKHVSWPQEQLPKKELGLPKQAR 481
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDISLMGPAF 528
++NP T N+ +G C+ DVL L EE+ + +N R+ Y ++
Sbjct: 482 VVSNPVTLSLNESVIGMCSHDVLYDLRKEEV-LGGRPAEANLLTRLPKYIIE------QR 534
Query: 529 FFYPLYPPAE----------------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
F P++PP+ G +D S + + PDI+I PS + F+KV
Sbjct: 535 HFAPMFPPSSRDSLPKSGGLDSMLPIGGMMDVSYLKLGDWWNVRPDILITPSLLPPFVKV 594
Query: 573 LSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+ + + +NPG L+K +GT+A + +
Sbjct: 595 V-----------ESVLVINPGTLSKRRAAGTYANMALY 621
>gi|363755740|ref|XP_003648085.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892121|gb|AET41268.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
Length = 652
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 190/418 (45%), Gaps = 71/418 (16%)
Query: 240 DPTVASQRTLFAVGMICCDG--DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPG 297
DPT+ SQ L G I D D LN SV +++S G+R+RL+L + E SLFPG
Sbjct: 251 DPTIQSQSALICTGRIVPDTPCDERLNMDSVAIETSRSAGIGRRIRLNLDDVKECSLFPG 310
Query: 298 QVVGIEGSNPSGHCLIASKLVD--QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
Q++ + G N +G ++++ + PV ++ D+ S + LD ++
Sbjct: 311 QLIALRGKNANGEYFKVEEILELPYLDFPVSSIQDIQES-QLTLD------------SQM 357
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDS--- 411
+++ +GP+T ++ F E + K +P +LI+ GPF+D HP IK G
Sbjct: 358 KIVVTSGPYTPKNSFDFTNFSEFVERINTKIKPHVLIMFGPFLDISHPLIKTGGIPKFPN 417
Query: 412 ------SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPD 464
+ DEIF L+ L ++ + +++ IL+PS +D V PQ F +
Sbjct: 418 LKFQPRTMDEIF----LKVLAPILKNLNPKIQVILIPSTKDVLSKHVSYPQDAFSRRELQ 473
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDIS 522
+ +TNP TF+ N++ GC D+ K + +E+ + + N DR+ + L
Sbjct: 474 LPKNFKCVTNPATFQLNELFFGCSNNDIFKDV--KEIPKGPNTLSKNRLDRVAEHILQQR 531
Query: 523 LMGPAFFFYPLYPP---------------AEGIPLDFS-LAQEALTISTIPDIIILPSDM 566
FYPL+P G L+ L IPD+II+PS++
Sbjct: 532 R------FYPLFPGNINTCKTSDDGTREHISGADLEVPYLGLTEFVGDFIPDVIIIPSEL 585
Query: 567 KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEIYYHGSPEMMNASIISI 623
+F +V+ K V +NPG + GS GT+ +I P++ N ++ +
Sbjct: 586 THFARVV-----------KNVVFINPGPFVRAGGSRGTYIQISI-SPPDVENGNVTKV 631
>gi|346325339|gb|EGX94936.1| DNA polymerase alpha/primase associated subunit [Cordyceps
militaris CM01]
Length = 667
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 184/403 (45%), Gaps = 67/403 (16%)
Query: 249 LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNP 307
+ AVG + D +G LN S++L++S G RV L+L L +S+FPGQ++ + GSN
Sbjct: 266 IVAVGRVASDAAEGRLNAASLVLETSRRTGMGFRVPLNLEALPAWSVFPGQILALRGSNA 325
Query: 308 SGHCLIASKLVDQIPLPVDA----VVDVHPSMKQALDQEIHSTVVISRPE------EISM 357
+G+ + +L+ LP A + H + D + + + E +++
Sbjct: 326 TGNEFVVQELLPLPLLPNAASTGEALAAHEERMRVRDPD---AMTVDEEEGTPPAPPLTL 382
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD------- 410
AAGP+T DNL F PL L A +L+L GPF+D++HP I G D
Sbjct: 383 FFAAGPYTADDNLDFAPLHALCEQAADTHADVLVLAGPFLDADHPLIAAGDFDLPADLPD 442
Query: 411 ---SSFDEIF-HL--EILRRLQDYVEYMGSEVRAILVPSIRD--ANHDFVLPQPPFDIQP 462
++ +F HL L RL + V +LVPS+RD A H PQ F Q
Sbjct: 443 ADAATMATVFRHLVAPALTRLATTRPH----VTVVLVPSVRDVLAKH-VSWPQEAFSRQS 497
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDIS 522
+ + ++NP T N++ + + D L L EE++R + G R+ + ++
Sbjct: 498 LGLHKAVRIVSNPMTLSVNEVVLAVSSQDALWALYAEELARAAP-GDLTARLCRHLVEQR 556
Query: 523 LMGPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMK 567
+YP+YPP A G LD S + ++ PD+++ PS +
Sbjct: 557 ------HYYPVYPPTDRARLPRTGTDDGLATGAVLDLSYLKLGEMVNVRPDVMLTPSALP 610
Query: 568 YFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F KV+ + + +NPG L+K G+GT+A + H
Sbjct: 611 PFAKVV-----------ESVLAINPGYLSKRRGAGTYARMTLH 642
>gi|396477047|ref|XP_003840181.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
gi|312216752|emb|CBX96702.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
Length = 692
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 188/429 (43%), Gaps = 86/429 (20%)
Query: 240 DPTVASQRTLFAVGMICCD-GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQ 298
+P S + AVG I D +G LN +V+L+ S + G+R L + L ++ FPGQ
Sbjct: 256 NPQYQSPNEIIAVGRIASDTSEGKLNPSTVVLEGSRRYGSGRRTPLKIEGLSSYNFFPGQ 315
Query: 299 VVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE---- 354
+V + G+N SG + S+++ +PL ++P + ++ + + P+
Sbjct: 316 IVALRGTNASGDAFVVSEVI-ALPL-------LNPPATTPTELDVIRSRYLDTPDSDPDN 367
Query: 355 ---ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD- 410
++++IA+GP+TT NL F PL + A +IL+GPF+D+EHPQI+ G D
Sbjct: 368 VRPLTIMIASGPYTTDQNLDFFPLHTFLDNAAEAYADTVILIGPFLDAEHPQIRSGDFDP 427
Query: 411 --------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF-VLPQPPF--- 458
++ ++F I LQ++ + ILVP++RDA+H PQ F
Sbjct: 428 PPNAIPDQATMTDLFKHHISSALQNF-HKRNPTCQVILVPNLRDAHHHHAAFPQDKFIKK 486
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYS 518
++ + +TNP T N++ VG ++D+L L EE++ G + + +Y
Sbjct: 487 ELGLGPAAKMVQCVTNPMTLSMNELTVGMSSIDILDMLRREELT-----GGTAKTVNLYE 541
Query: 519 LDISLMGPAFFFYPLYPPAE---------------------------------------- 538
+ F P++PP
Sbjct: 542 RCARNLLEQRNFLPVFPPTARQKQQLAPTPVDAKPFKPSTTATAADEDPDDDSPSPFLPL 601
Query: 539 GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
G LD S + A ++ PDI+I PS ++ + + + VNPG LAK
Sbjct: 602 GTMLDTSYLKLADMLNVRPDILITPSVLQ-----------GTVKVVESVLVVNPGTLAKR 650
Query: 599 EGSGTFAEI 607
+G+FA +
Sbjct: 651 RAAGSFARL 659
>gi|426195866|gb|EKV45795.1| hypothetical protein AGABI2DRAFT_179299 [Agaricus bisporus var.
bisporus H97]
Length = 588
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 58/407 (14%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGD---G 261
R+M+++ +R L+ I A+ + S ++ DP + + VG I D D
Sbjct: 158 RYMFEKQMERSENLDQMIDDAADIVRSYFKLDDIGDPGTTTDEDVVIVGRIFSDVDVEAE 217
Query: 262 HLNDKSVLLQSSVEHSGGQRVRLDLH----------KLGEFSLFPGQVVGIEGSNPSG-H 310
L + S+ L+SS SGG R+ L H FPG +V ++G N G H
Sbjct: 218 KLTESSLFLESSRMLSGGARIALKFHPALVIRNNIRGARGLGFFPGAIVALKGRNGGGGH 277
Query: 311 CLIASKLVDQIPLPVDAV-----VDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFT 365
L+ L +P P V + V P A S+I A GPFT
Sbjct: 278 FLVNEVLTLPVPNPTTPVSGENTMKVDPVESGAF----------------SLIAACGPFT 321
Query: 366 TTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRL 425
+L + L L+ AK+ +P L+L+GPFVD+ HP I+ G DS+ E+FH +I +
Sbjct: 322 AYSDLSYTFLASLVEAAKKDKPSALLLVGPFVDANHPSIRVGDLDSTPVELFHEKIYSSI 381
Query: 426 QDYVEYMGSEVRAILVPSIRD--ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQI 483
+ +++ + AIL+P +RD +NH V PQ +I + NP F+ N +
Sbjct: 382 KSFLDASPGSI-AILLPGVRDLLSNHA-VYPQSELSRDLVKNDPRIHLIPNPSRFKINDV 439
Query: 484 KVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISL---------MGPAFFFYPLY 534
G C+VDVL L EE + ++ + + ++ D+ + FYP++
Sbjct: 440 SFGACSVDVLFHLRKEEFLKLGRE--VDPVLPVHEDDVGTDVMANTCRHLLQQRSFYPIF 497
Query: 535 PPAEGIP----LDFSLAQEALTIS----TIPDIIILPSDMKYFIKVL 573
P G+ +D S + + PD++ILPS +K+F+K++
Sbjct: 498 PTPPGLAHEVNMDVSHSDGLRLVDGDNPNPPDVLILPSKLKHFVKMV 544
>gi|226295381|gb|EEH50801.1| DNA polymerase subunit alpha B [Paracoccidioides brasiliensis Pb18]
Length = 655
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 258/634 (40%), Gaps = 98/634 (15%)
Query: 33 YNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFML--------------HLQNEQKEAI 78
+++ DL W+ Y L DE+ + D G H++N K +
Sbjct: 35 HSMSAQDLSYKWDAYCLKMGADETALNLDTARGLKRDVQDALERESRVKSHVRNTDKRSA 94
Query: 79 IKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDK 138
+ P S M+ +D + +P D + + KA S+ K
Sbjct: 95 VSVTPRAAANSRAVFGML---------DDFVPSPQDRDTKGGNGTSTKRKAAFGNPSTSK 145
Query: 139 PSK----LVTPFGRRTEKLVVKFNINNLPN----TENGCIEHDDENTEDDIIKRIKTGKK 190
+ + +P +T + ++ ++ L T N + T RIK
Sbjct: 146 VGRAEMGMGSPADSKTPQRLLNGDLAGLHGQVLETLNSHLSMAQVPTAPYQEARIKPTAN 205
Query: 191 CSLMVHGSGPEPGCRFMYDRTE---DRFNALENRIRKHANALVSSGLYEEPTDPTVASQR 247
L G +P + + +E DR + ++KH GL ++ + A+Q
Sbjct: 206 TELKKFGY--KPMAMHLNEASEVLDDRIDEFMAIVQKH------HGL-DDTAFGSAANQS 256
Query: 248 T--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
T + AVG I D +G LN S++L++S G RV L + L +PGQ+V + G
Sbjct: 257 TKEIIAVGRIASDSMEGKLNTASLVLETSRRMGAGLRVPLKVDSLPSVQFYPGQIVALRG 316
Query: 305 SNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
N S +++ LP V P + + ++ + ++++IA+GPF
Sbjct: 317 INASREYFTVFEVLSVPLLPPAVTV---PEIIRKVNGRLGGG---DTERVLNILIASGPF 370
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SSF 413
T DNL FEPL+ L A + LIL GPF+D EHP + G D +S
Sbjct: 371 TADDNLDFEPLRTLCIKAANEYADALILTGPFLDLEHPLLASGDFDLPEIKGLDPDTASL 430
Query: 414 DEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSL 472
+F I L + S + L+PS+RDA V PQ + + Q ++
Sbjct: 431 SALFRHCISAPLHQLASAVPS-ISIFLIPSVRDAVSKHVSWPQEMLPKKELGLPRQARTV 489
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPAFFFY 531
TNP T N+ G C+ DVL +L EE ++ +G R+ Y ++ F+
Sbjct: 490 TNPVTLSLNENVFGMCSHDVLYELRQEEVLAGKPSEGGLLTRLSRYLIE------QRHFF 543
Query: 532 PLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLG 576
P++PP A G LD S + + PD++I PS + F+KV+
Sbjct: 544 PVFPPTSRENLPKSGLEGSIATGAMLDTSYMKLGEWWNVRPDVLITPSMLPPFVKVV--- 600
Query: 577 GRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
EG + +NPG L+K + G++A++ H
Sbjct: 601 ---EG-----VLVINPGTLSKRKAPGSYAQMGLH 626
>gi|154283103|ref|XP_001542347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410527|gb|EDN05915.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 626
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 183/399 (45%), Gaps = 59/399 (14%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G R+ L + L FPGQ+V +
Sbjct: 225 STKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALR 284
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + S E ++++IA+G
Sbjct: 285 GINASREYFTVFEVLS-------TPLLPPAASPPAIIQSINDRLGDSDAERALNILIASG 337
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L + A + LIL GPF+D EHP + G D +
Sbjct: 338 PFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASGDFDLPDEKGLDPDNA 397
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIH--Q 468
+ +F I L+ + S + LVPS+RDA V PQ + D+ Q
Sbjct: 398 TLSSLFQCYITPLLKQLASAVPS-ICIFLVPSVRDAISKHVSFPQEKLLKRDLDLFQTKQ 456
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM--SRCSKDGTSNDRMEIYSLDISLMGP 526
+ ++ NP T N+ G C+ DVL +L EE+ R S+ G R+ Y ++
Sbjct: 457 VRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLT-RLSRYLIE------ 509
Query: 527 AFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
F P++PP A G LD S + + PD++I PS + F+K
Sbjct: 510 QRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPSILPPFVK 569
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ EG + +NPG L+K + +G+FA++ H
Sbjct: 570 VV------EG-----VLVINPGTLSKRKAAGSFAQMTLH 597
>gi|325091120|gb|EGC44430.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus H88]
Length = 667
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 183/399 (45%), Gaps = 59/399 (14%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G R+ L + L FPGQ+V +
Sbjct: 266 STKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALR 325
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + S E ++++IA+G
Sbjct: 326 GINASREYFTVFEVLS-------TPLLPPAASPPAIIQSINDRLGDSDAERALNILIASG 378
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L + A + LIL GPF+D EHP + G D +
Sbjct: 379 PFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASGDFDLPDEKGLDPDNA 438
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIH--Q 468
+ +F I L+ + S + LVPS+RDA V PQ + D+ Q
Sbjct: 439 TLSSLFQCYITPLLKQLASAVPS-ICIFLVPSVRDAISKHVSFPQEKLLKRDLDLFQTKQ 497
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM--SRCSKDGTSNDRMEIYSLDISLMGP 526
+ ++ NP T N+ G C+ DVL +L EE+ R S+ G R+ Y ++
Sbjct: 498 VRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLT-RLSRYLIE------ 550
Query: 527 AFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
F P++PP A G LD S + + PD++I PS + F+K
Sbjct: 551 QRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPSILPPFVK 610
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ EG + +NPG L+K + +G+FA++ H
Sbjct: 611 VV------EG-----VLVINPGTLSKRKAAGSFAQMTLH 638
>gi|225561681|gb|EEH09961.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus G186AR]
Length = 667
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 183/399 (45%), Gaps = 59/399 (14%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G R+ L + L FPGQ+V +
Sbjct: 266 STKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALR 325
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + S E ++++IA+G
Sbjct: 326 GINASREYFTVFEVLS-------TPLLPPAASPPAIIQSINDRLGDSDAERALNILIASG 378
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L + A + LIL GPF+D EHP + G D +
Sbjct: 379 PFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASGDFDLPDEKGLDPDNA 438
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIH--Q 468
+ +F I L+ + S + LVPS+RDA V PQ + D+ Q
Sbjct: 439 TLSSLFQCYITPLLKQLASAVPS-ICIFLVPSVRDAISKHVSFPQEKLLKRDLDLFQTKQ 497
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM--SRCSKDGTSNDRMEIYSLDISLMGP 526
+ ++ NP T N+ G C+ DVL +L EE+ R S+ G R+ Y ++
Sbjct: 498 VRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLT-RLSRYLIE------ 550
Query: 527 AFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
F P++PP A G LD S + + PD++I PS + F+K
Sbjct: 551 QRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPSILPPFVK 610
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
V+ EG + +NPG L+K + +G+FA++ H
Sbjct: 611 VV------EG-----VLVINPGTLSKRKAAGSFAQMTLH 638
>gi|225677496|gb|EEH15780.1| DNA polymerase alpha 70 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 665
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 178/395 (45%), Gaps = 53/395 (13%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G RV L + L +PGQ+V +
Sbjct: 266 STKEIIAVGRIASDSMEGKLNTASLVLETSRRMGAGLRVPLKVDSLPSVQFYPGQIVALR 325
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N S +++ LP V P + + ++ + ++++IA+GP
Sbjct: 326 GINASREYFTVFEVLSVPLLPPAVTV---PEIIRKVNGRLGGG---DTERVLNILIASGP 379
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
FT DNL FEPL+ L A + LIL GPF+D EHP + G D +S
Sbjct: 380 FTADDNLDFEPLRTLCIKAANEYADALILTGPFLDLEHPLLASGDFDLPEIKGLDPDTAS 439
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITS 471
+F I L + S + L+PS+RDA V PQ + + Q +
Sbjct: 440 LSALFRHCISAPLHQLASAVPS-ISIFLIPSVRDAVSKHVSWPQEMLPKKELGLPRQART 498
Query: 472 LTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPAFFF 530
+TNP T N+ G C+ DVL +L EE ++ +G R+ Y ++ F
Sbjct: 499 VTNPVTLSLNENVFGMCSHDVLYELRQEEVLAGKPSEGGLLTRLSRYLIE------QRHF 552
Query: 531 YPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSL 575
+P++PP A G LD S + + PD++I PS + F+KV+
Sbjct: 553 FPVFPPTSRENLPKSGLEGSIATGAMLDTSYLKLGEWWNVRPDVLITPSMLPPFVKVV-- 610
Query: 576 GGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
EG + +NPG L+K + G++A++ H
Sbjct: 611 ----EG-----VLVINPGTLSKRKAPGSYAQMGLH 636
>gi|169858232|ref|XP_001835762.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116503212|gb|EAU86107.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 612
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 195/431 (45%), Gaps = 63/431 (14%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGD---- 260
R+MY++ +R L+ I A + E DP+ ++ + VG I D D
Sbjct: 167 RYMYEKISERSEVLDQIIDDFAELIRDHYDISELADPSSTTEEEVTVVGRIAQDPDVMAR 226
Query: 261 GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE----------FSLFPGQVVGIEGSNPSGH 310
L + S++++SS S G RV L L + + LFPGQ+V ++G N G
Sbjct: 227 SKLTESSMVIESSRMLSSGARVPLRLDPAIQVKGAVQGSRGYGLFPGQIVALQGKNGGGG 286
Query: 311 CLIASKLVDQIPLPVDAVVD--VHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
A+ ++ PL D + P L + STV I A GP+T+
Sbjct: 287 YFYATTILAIPPLKPSPTSDGLIDPKADPELGTKT-STVCI----------ACGPYTSDT 335
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
+L ++P + + K+P +LILLGPF+D+ HP+IK G +++S IF + ++ +
Sbjct: 336 DLLYKPWRVFLDDITPKKPNVLILLGPFIDAAHPRIKNGESETSPQSIFQARFINSIRKF 395
Query: 429 VEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDII--HQITSLTNPGTFEANQIKV 485
+ S + I +PSIRD D PQP F+ I +I NP F+ N I
Sbjct: 396 LNASPSSI-VIFIPSIRDMISDHCSFPQPEFERTFDGIAGDSRIIFQPNPCRFKINDISF 454
Query: 486 GCCTVDVLKQLSGEEMSRC--------SKDG-TSNDRMEIYSLDISLMGPAFFFYPLYPP 536
G +VDVL L EE + +++G ++D M +L L+ FYP++P
Sbjct: 455 GATSVDVLFHLRKEEYLKVGSQLQPIPAREGDLASDPMS--NLCRHLLD-QRSFYPIFPV 511
Query: 537 AEGIPLDFSLAQEAL---------TISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKC 587
E + + +L L I PD++I+PS ++ F KV+S
Sbjct: 512 PEELSHEINLDVSHLDGARIIDDGEIDYAPDVLIVPSRLRKFDKVVS-----------TT 560
Query: 588 VCVNPGRLAKG 598
+ +NP ++KG
Sbjct: 561 LAINPSSVSKG 571
>gi|398407609|ref|XP_003855270.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
gi|339475154|gb|EGP90246.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
Length = 672
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 202/449 (44%), Gaps = 83/449 (18%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD-GDGHLNDKSVLL 270
+DR ++ +++KH L S +P S + AVG I CD +G LN S++L
Sbjct: 221 DDRIDSFTEQVQKHYE-LEDSAF----GNPAAQSTAEIVAVGRIACDVPNGKLNASSLVL 275
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD 330
++S G RV L + + FPG++V + G+N G +++ +P+P+
Sbjct: 276 ETSRRMGAGMRVPLQMDPSLTYDFFPGKIVALRGTNVGGEFFRPTEV---LPIPLLPPAA 332
Query: 331 VHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLL 390
PS + + + P +++++A+GP+TT +L + PL L++ A ++P LL
Sbjct: 333 SLPSDLINHNARLEDATGNTPP--LNLLVASGPYTTDTDLSYAPLYALLNVASTQKPDLL 390
Query: 391 ILLGPFVDSEHPQIKKGTTDS-------------SFDEIFHLEILRRLQDYVEYMGSEVR 437
++ GPF+D EHPQI G S + ++F L I + L + + +
Sbjct: 391 LISGPFLDLEHPQISAGDVASLIPDSSNISPDRATLTDLFRLTISQPL-NALAAANPSMT 449
Query: 438 AILVPSIRDANHDFVLPQPPFDIQPPDII----HQITSLTNPGTFEANQIKVGCCTVDVL 493
+LVPS+RDA V P D + I ++NP N+I +G + DVL
Sbjct: 450 IVLVPSLRDAVMKTV--SWPQDRGVKKDLGLGGRNINIVSNPICLSLNEILLGTTSTDVL 507
Query: 494 KQLSGEEM-------SRCSKDGTSND---RMEIYSLDISLMGPAFFFYPLYPPA--EGIP 541
+L E + R + G ++D R+ + L+ S F+P++PPA E +P
Sbjct: 508 SELRRENVYHNAAQNGRTNGLGITDDILARLSGHILEQS------HFFPVFPPAAREDLP 561
Query: 542 LDFSLAQEALTIS-----------------------TIPDIIILPSDMKYFIKVLSLGGR 578
LA E + PD+++LPS + F KV+
Sbjct: 562 KPTRLAGEVPEVGGEEQLAMGANLDLGYLKLGEFWMARPDLLVLPSGLSPFAKVV----- 616
Query: 579 NEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+ V VNPG ++K G+GT+A +
Sbjct: 617 ------ESTVVVNPGTVSKKRGAGTYAVV 639
>gi|315042075|ref|XP_003170414.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
gi|311345448|gb|EFR04651.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
Length = 664
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 182/402 (45%), Gaps = 67/402 (16%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++L++S G RV L + KL + FPGQ+V +
Sbjct: 265 STREVIAVGRIASDSPEGRLNTASIVLETSRRTGAGLRVPLKIDKLQHINFFPGQIVALR 324
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG + D + +P+ + P+ +A ++++ S + ++ I AAGP
Sbjct: 325 GINASGEYFT---VFDTLAIPLLPLPVSLPAEVEATNEKLDSF----GDQPLNYIFAAGP 377
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FE L L A + LIL GPF+D EHP I G D ++
Sbjct: 378 YTTDDNLAFEALNTLCEKAAEECADALILTGPFIDLEHPLIASGDFDLPELKGLDPDTAT 437
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF------VLPQPPFDIQPPDII 466
+F I R L + + IL+PS+RDA +LP+ + P
Sbjct: 438 LATLFKHCISRPLTQLASKV-PNINIILIPSVRDAVSKHISWPQEILPKRELGLPP---- 492
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSND---RMEIYSLDISL 523
Q +TNP N+I VG C D L +L EE+ S + +D R+ Y ++
Sbjct: 493 KQAKVVTNPVAISLNEIMVGLCASDTLYELRREEV--VSGRPSESDLLSRLPRYLIE--- 547
Query: 524 MGPAFFFYPLYPPAEGIPLDFSLAQEALTISTI---------------PDIIILPSDMKY 568
F P++PP L S +E L I ++ PDI+I PS +
Sbjct: 548 ---QRHFSPVFPPTARENLPKSGVEENLQIGSMLDTTYLKLGDWWKARPDILITPSVLPG 604
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
F+KV + V +NPG+L+K GT+A+I H
Sbjct: 605 FVKV-----------VESVVVINPGKLSKRRSPGTYAQIAVH 635
>gi|336369696|gb|EGN98037.1| hypothetical protein SERLA73DRAFT_91246 [Serpula lacrymans var.
lacrymans S7.3]
Length = 591
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 198/476 (41%), Gaps = 103/476 (21%)
Query: 196 HGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMI 255
H P ++MY++ +R L++RI + A + E+ DP AS+ + VG I
Sbjct: 144 HEQHSAPPDKYMYEKILERSEVLDDRIDEFAGLVQKYYNIEDLGDPGSASEEVITVVGRI 203
Query: 256 CCDGD-----GHLNDKSVLLQSSVEHSGGQRV---------RLDLHKLGEFSLFPGQVVG 301
D + LN+ S+LL+SS G R+ R +G LFPG ++
Sbjct: 204 VLDAETSSSGAKLNEASLLLESSRMMGSGTRIPIRFQGTKIRGGPKGVGGMGLFPGAIIA 263
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA 361
G N G C + + + + + + +SM IA
Sbjct: 264 ARGKNGGGGCFVVEE------------------LLTLPRLKPPPLPLGNADSSLSMCIAC 305
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEI 421
GPFT +L ++P +LI K +P +++L+GPF+DS HP I+ G D + E+F I
Sbjct: 306 GPFTPDTDLEYQPFHQLIHTLKSTKPAIVLLIGPFIDSAHPYIRDGEVDRTPKEMFQTLI 365
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDANHDF-VLPQPPFD--------IQPPDIIH----- 467
L L D+++ G+ ++VPSIRD D V PQ D I P+ +
Sbjct: 366 L-NLHDFLKISGTS-NVLMVPSIRDIISDHNVFPQSELDEKLKNLENIDNPEKLEIFENP 423
Query: 468 -------QITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR--------CSKDGTSND 512
+I L+NP F N I +VDVL L E+ + S ++ND
Sbjct: 424 GNRKNHPRIHFLSNPCRFSLNGISFAVSSVDVLFHLRKNELFKRGAEVDPQSSSVLSAND 483
Query: 513 RMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS-------LAQEALTI-----STIPDII 560
M I FYP++P +PLD + E L + PD++
Sbjct: 484 PMSNLCRHILQQRS---FYPIFP----VPLDLTDEVNLDVSHSEGLKLVDGPDPVAPDVL 536
Query: 561 ILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG----------EGSGTFAE 606
I+PS +K+F KV+ V +NP L+KG + SG+F E
Sbjct: 537 IVPSRLKHFSKVVD-----------DTVSINPSFLSKGTYATVSLDDSKTSGSFVE 581
>gi|157124545|ref|XP_001654098.1| hypothetical protein AaeL_AAEL009905 [Aedes aegypti]
gi|108873944|gb|EAT38169.1| AAEL009905-PA, partial [Aedes aegypti]
Length = 513
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 150/326 (46%), Gaps = 45/326 (13%)
Query: 283 RLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQE 342
+LD K+ +S+FPG+ V ++G NP G+ K+ +I L + P L +E
Sbjct: 209 KLDFSKMKAWSVFPGETVVLKGVNPRGNAFEVQKVHYEINLEL-------PKAPMELGKE 261
Query: 343 IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHP 402
+ SM+IA+GP+T D+L +E L +L++Y K P +LIL GPF D +P
Sbjct: 262 L------------SMVIASGPYTAKDDLLYEKLSDLLTYCKNNCPDVLILTGPFGDISNP 309
Query: 403 QIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQP 462
T ++DE F I+ + + + ++V D FV P P+ +
Sbjct: 310 LF--STIAETYDEYFEKLIINIMSS----VSTNTEVLIVSHHDDLMSMFVYPSFPYQLYS 363
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDIS 522
+ L +P N +++G T D++K L C + + + +I +
Sbjct: 364 A-TFPNLRFLPDPCIVSINGLEIGITTADIIKDL-------CDDEESGGPKGDIIKRAFN 415
Query: 523 LMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGE 582
M FYPL PP+ +PLD L I +P+I+I P D+K ++K
Sbjct: 416 YMFHHKTFYPLNPPSVNLPLDMDLLSVFGNIPRVPNIMICPGDLKCYVK----------- 464
Query: 583 EQKKCVCVNPGRLA-KGEGSGTFAEI 607
E +CVCVNP L + G GTFA +
Sbjct: 465 ELHRCVCVNPQHLMDQTSGEGTFARV 490
>gi|410082157|ref|XP_003958657.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
gi|372465246|emb|CCF59522.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
Length = 679
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 192/408 (47%), Gaps = 75/408 (18%)
Query: 240 DPTVASQRTLFAVGMICCD---GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPTV SQ +++ VG I D +G LN +S+ L++S G+RVRLDL + E SLF
Sbjct: 270 DPTVQSQSSVYCVGRIVPDTITSEGFLNPESLSLETSRVSGIGRRVRLDLSNIEETSLFA 329
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEI--HSTVVISRPEE 354
GQ+VG+ G N +G ++++ LP +P + ++E+ + T++ ++ E+
Sbjct: 330 GQIVGLRGKNANGDSFSVEEILE---LP-------YPEFPVSTEEELLEYKTLLDNKSEK 379
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTT---- 409
I ++ +GP+ +N L+E + ++ +P ++I+ GPF+D +P I G
Sbjct: 380 I--LVTSGPYIPDNNFDLSHLEEFVERVNQEIKPHIIIMFGPFIDVTNPIIMAGNIPHFQ 437
Query: 410 -----DSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPP 463
+ +E+F + + ++ + + IL+PS +DA + PQ FD +
Sbjct: 438 NLKQQPRTLNELF----TKLITPILKKINPSTQVILIPSTKDALSQHASYPQDSFDRRIL 493
Query: 464 DIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDI 521
+ TNP TF+ N+ C VD+ K + +E+++ K SN DR+ + L
Sbjct: 494 QLPKNFKCFTNPSTFQLNETFFSCSNVDIFKDM--KEVTKGGKTSMSNRFDRISTHLLQQ 551
Query: 522 SLMGPAFFFYPLYPPA--------------------EGIPLDFS-LAQEALTISTIPDII 560
FYP++P + G L+ S L + DI+
Sbjct: 552 RR------FYPVFPGSIKSMTIPDPNTKDTKSYKHVSGADLEVSYLGLTEFIGNLASDIL 605
Query: 561 ILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
I+PS+M F + + K + +NPG+ + +G GT+A+I
Sbjct: 606 IIPSEMHAFARCV-----------KNVIFINPGKFIRMKGGRGTYAQI 642
>gi|345560327|gb|EGX43452.1| hypothetical protein AOL_s00215g188 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 187/424 (44%), Gaps = 51/424 (12%)
Query: 203 GCRFMYDRTEDRFNALENRIRKHANALVSSGLY--EEPTDPTVASQRTLFAVGMICCD-- 258
G + MY + L++RI ++A A+ E+ +P + VG I D
Sbjct: 208 GYKPMYQKLVAGSQVLDDRIEEYAVAIQKEHNIPNEDFCNPCSKLPEEVVVVGRIVTDVM 267
Query: 259 -GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKL 317
N+ S+LL++S G RVRLDL L ++ +PG V + NP+ L+ +
Sbjct: 268 ESQKRSNEASLLLEASRGDGEGGRVRLDLSALKGYAFYPGMTVAFKAMNPTADKLLVKSV 327
Query: 318 VDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKE 377
+ P PS +++E ++ IAAGP+TT DNL FE L E
Sbjct: 328 LTP---PTYFGAGSKPS---DMEEEFRKLAA----GNFNVFIAAGPYTTDDNLDFEGLTE 377
Query: 378 LISYAKRKQPQLLILLGPFVDSEHPQIKKGT--------TDSSFDEIFHLEILRRLQDYV 429
L+ +P + L GPF+D+EHP++K G + +++F +I +L
Sbjct: 378 LVDKIVETEPDAVFLSGPFIDTEHPKVKLGDFPVDMNNFSGYVLEDLFKEKITSQLNRIT 437
Query: 430 EYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCC 488
+ M +LVPS RDA V PQ F + + + LTNP N+I+ G
Sbjct: 438 KSM-----VLLVPSTRDAVSKHVSFPQDRFQRKLLGLQPNVQLLTNPCMIALNEIQFGIS 492
Query: 489 TVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEG------IPL 542
+ D+L L+ +E+ K N + + IS + FYPL+P E P+
Sbjct: 493 SADILFHLNMQEVKASGKGIEMNTFHRLANYVIS----SSHFYPLFPAPEASQVGYTTPV 548
Query: 543 DFSLAQEALTISTI-PDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS 601
D + A I PD++IL S + +KV++ V +NPG ++ +
Sbjct: 549 DLQWMRLAEFPGNIKPDVLILSSKLPGTVKVVN-----------GVVTINPGFMSTTRTA 597
Query: 602 GTFA 605
GT+A
Sbjct: 598 GTYA 601
>gi|23271843|gb|AAH23688.1| Pola2 protein [Mus musculus]
Length = 454
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 128/235 (54%), Gaps = 26/235 (11%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 199 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 319 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVACGPYTTSDSITYDPLL 361
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFH------LEILRRL 425
+LI+ R QP + IL GPF+D++H Q++ S F+++F +E RRL
Sbjct: 362 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFKQCLRTVIEGTRRL 416
>gi|74139710|dbj|BAE31706.1| unnamed protein product [Mus musculus]
Length = 414
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 128/235 (54%), Gaps = 26/235 (11%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 159 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 218
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 219 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 278
Query: 317 LVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLK 376
L + +PLP Q ++E S E+ +++A GP+TT+D++ ++PL
Sbjct: 279 LYEGVPLP----------FYQPTEEEGAS-------EQTMVVVACGPYTTSDSITYDPLL 321
Query: 377 ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFH------LEILRRL 425
+LI+ R QP + IL GPF+D++H Q++ S F+++F +E RRL
Sbjct: 322 DLIAIINRDQPDVCILFGPFLDAKHEQVENCKLTSPFEDVFKQCLRTVIEGTRRL 376
>gi|254585985|ref|XP_002498560.1| ZYRO0G13200p [Zygosaccharomyces rouxii]
gi|238941454|emb|CAR29627.1| ZYRO0G13200p [Zygosaccharomyces rouxii]
Length = 651
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 70/405 (17%)
Query: 240 DPTVASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
DPT+ +Q L+ VG I D + HLN++S+ L++S G+R+RLDL + E S F
Sbjct: 243 DPTIQAQSELYTVGRIVPDSSSSEDHLNEESLALETSRMGGVGRRIRLDLSNVNEVSFFC 302
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
GQ+V ++G N + S+++ +P P D S + L + +S + +P +I
Sbjct: 303 GQIVALKGKNANDEYFTVSEVL-SLPYP-----DSPTSTLEELQETSNS--MNGKPSKI- 353
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTT------ 409
+I +GP+ ++ L + + +P +L++ GPF+D + I KGT
Sbjct: 354 -VITSGPYIPDNSFSMINLDNFVERINTEIKPHVLVMFGPFIDYTNSMIAKGTIPIFPNL 412
Query: 410 ---DSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDI 465
+ DEIF ++ + ++ + S+++ I++PS RD + PQ FD + +
Sbjct: 413 KIQPKTLDEIF----IKVMAPILKNIDSQIQVIMIPSTRDTLSKHAAYPQDSFDRKALHL 468
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDISL 523
NP TF+ N++ GC VD+ K + +E++R N DR+ + L
Sbjct: 469 PKNFKCFANPSTFQLNEVFFGCSNVDIFKDM--KEVTRGGNIFLRNRFDRISEHLLQQRR 526
Query: 524 MGPAFFFYPLYPPAEGIPL-----------------DFSLAQEALTIST---IPDIIILP 563
FYP++P L D +A LT PDII++P
Sbjct: 527 ------FYPVFPGGVRKKLLPSSTNSERTYQHISGADLEVAYMGLTEFVDGFAPDIIVIP 580
Query: 564 SDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-GTFAEI 607
S++ F +V+ + V +NPGR K G+ GT+A+I
Sbjct: 581 SELPQFARVV-----------QNVVMINPGRFIKPLGAKGTYAQI 614
>gi|302911324|ref|XP_003050467.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731404|gb|EEU44754.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 656
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 192/435 (44%), Gaps = 63/435 (14%)
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT-LFAVGMICCDG-DGHLNDKSVL 269
+DR ++ I++H GL E A T + AVG I D +G LN S++
Sbjct: 221 DDRIDSFMALIQEH------HGLDEAAFGSAAAQSTTEVVAVGRIASDSTEGKLNAASLV 274
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
+ S G RV L + + + FPGQ+V + G+N SG + ++++ LP A +
Sbjct: 275 FEMSRRGGMGLRVPLKMDHVRSWCFFPGQIVALRGTNASGTEFVVKEILEIPLLPNAASL 334
Query: 330 DVHPSMKQALDQEIHSTVVI----SRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
PS + + + + P ++ + A+GP+T DNL FEPL L + A
Sbjct: 335 ---PSALEGHRERLRGGPDAMEEDAEPTPLNALFASGPYTADDNLDFEPLHALCTQAADT 391
Query: 386 QPQLLILLGPFVDSEHPQIKKGTTD----SSFD-------EIFHLEILRRLQDYVEYMGS 434
L+L GPF+D +HP I G D ++FD +F + V
Sbjct: 392 YADALVLTGPFLDIDHPLIATGDFDLPEEANFDPDTATMTTVFKYLVSPAFNRLVSS-NP 450
Query: 435 EVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
+ ILVPS+RD V PQ + + + +TNP T N++ +G + D+L
Sbjct: 451 AITIILVPSVRDVLAKHVSWPQDSIPKKELGLPKAVRIVTNPMTLSINELVLGVSSQDIL 510
Query: 494 KQLSGEE-MSRCSKD--GTSNDRMEIYSLDISLMGPAFFFYPLYPP-------------- 536
QL EE +SR G R+ Y ++ ++PL+PP
Sbjct: 511 SQLRSEEVVSRGGPQPGGDLMGRLCRYLVE------QRHYFPLFPPTDRSRLPKTGTEEG 564
Query: 537 -AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRL 595
A G LD S + ++ PD++++PS + F KV+ + + +NPG L
Sbjct: 565 IATGAVLDVSYLELGEMVNVRPDVMMVPSLLPPFAKVV-----------ESVLLINPGYL 613
Query: 596 AKGEGSGTFAEIYYH 610
+K G+GT+A + H
Sbjct: 614 SKRRGAGTYARMTLH 628
>gi|170030754|ref|XP_001843253.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867929|gb|EDS31312.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 629
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 191/458 (41%), Gaps = 91/458 (19%)
Query: 203 GCRFMYDRTEDRFNALENRI--------------RKHANALVSSGLYEEPTDPTVASQRT 248
C++MYD DR L +RI RK + EE P + T
Sbjct: 216 ACKYMYDSNYDRVLILGDRIYEGGREICQRLAEARKQQRDRGNGASAEEEVIPEDDREAT 275
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSV--EHSGGQRV-------------RLDLHKLGEFS 293
L I + +VL + +V E G R+ +LD KL +S
Sbjct: 276 LLEQVAIHHVDYPSTDVITVLGRIAVHPERQEGGRLAIVDYDEMTLRYTKLDFSKLKSWS 335
Query: 294 LFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPE 353
+FPG+ V +EG NP G+ K VH + + I +P
Sbjct: 336 VFPGETVVLEGVNPRGNLFEVRK--------------VH---YEVPLAPPPAPTTIGKP- 377
Query: 354 EISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSF 413
+ M+I A PFT DNL ++ L +L++Y P +LIL GPF G+T S
Sbjct: 378 -LHMVIGAAPFTDKDNLQYDKLSDLLAYCAENNPDVLILTGPF----------GST--SN 424
Query: 414 DEIFHLEILRRLQDYVEYMGSEVRAILVPSIR---DANHD-----FVLPQPPFDIQPPDI 465
D +F L I ++Y E + + + + P+ +NHD FV P P+ I
Sbjct: 425 DTLF-LTIAESFEEYFEKIMANIVTSVPPTTEILIVSNHDDLQSSFVYPSFPYKIS--KF 481
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMG 525
+ L +P N + V TVDV++ LS E+S S D+++ + M
Sbjct: 482 YKNLHFLPDPCVVSINGMHVAITTVDVVRDLSEAELSV----APSGDKIK---RAFNYMF 534
Query: 526 PAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQK 585
FYPL PP E +PLD L T+ +P+++I P D+K +++ +
Sbjct: 535 HHRSFYPLNPPPESVPLDVDLLHHFGTLPRVPNVMICPGDLKPYVR-----------DVN 583
Query: 586 KCVCVNPGRLAKGE-GSGTFAEIYYHGSPEMMNASIIS 622
CVCVNPG L + G GTFA + H PE A+ S
Sbjct: 584 GCVCVNPGHLTDYDSGEGTFARVVVH-PPEEPTAAPFS 620
>gi|452819415|gb|EME26474.1| DNA polymerase alpha subunit B [Galdieria sulphuraria]
Length = 638
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 178/349 (51%), Gaps = 42/349 (12%)
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
+Q V+ + +D+ + SLFPG +V EG+ A + V
Sbjct: 296 IQVIVDSTQSHLFSVDVSCIHSCSLFPGAIVLFEGTKLQDGSFQAER--------VYHTS 347
Query: 330 DVHPSMKQALDQEI-HSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQ 388
+H + K+ E+ HS I+R E+ +++A+GP+T + NL ++PLK L++ + K+P
Sbjct: 348 HLHAADKKTEHYEVKHSINAITR--EMQILVASGPYTISTNLRYDPLKRLLNKVETKKPD 405
Query: 389 LLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEV--RAILVPSIRD 446
L+IL+GPF+D H ++ G T+ S+++I + +R+ +E S + + I++P ++D
Sbjct: 406 LVILVGPFLDENHRVVENGPTEVSYEDI----MAKRVGTLLERCFSRISTKCIMIPHVQD 461
Query: 447 ANHDFVLPQPPFD------IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE 500
H F PQ +D ++ PD I L NP F + + ++ VL ++
Sbjct: 462 VFHHFTYPQKAYDSSVFFPLKKPD---NIFFLNNPAAFRFGHVYISTTSIPVL-----DD 513
Query: 501 MSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDII 560
+S S T+N + I +L +L+ FYP++PP PLD+S Q+ S+ ++
Sbjct: 514 LSSLSYIKTANQKGRITALCETLIDEE-SFYPIFPPPPQRPLDYSNVQQLKLDSSKTRLL 572
Query: 561 ILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYY 609
I+ S +K F + L + +CVNPGRL+KG +G+FA I +
Sbjct: 573 IITSSLKPFTQRL----------KNDILCVNPGRLSKGVNNGSFALISH 611
>gi|402225765|gb|EJU05826.1| DNA polymerase alpha subunit B [Dacryopinax sp. DJM-731 SS1]
Length = 570
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 186/414 (44%), Gaps = 55/414 (13%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGD--GH 262
R+MY + + L++ I + + + E+ DP A+ + VG IC D D
Sbjct: 153 RYMYGKLSQKAEILDDIIDDISELVRAHYDLEDLGDPASATDEDVVVVGRICSDADTGAK 212
Query: 263 LNDKSVLLQSSVEHSGGQRVRLDL-HKLG-------EFSLFPGQVVGIEGSNPSGHCLIA 314
L + S+LL+SS G R L H F LFPGQ+V ++G N G A
Sbjct: 213 LTESSLLLESSRMGGSGVRTPLKFEHGFSVRGKNDNGFGLFPGQIVALKGKNGGGGWFSA 272
Query: 315 SKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEP 374
S+ +++ L E S +M+IA GPFT +L + P
Sbjct: 273 SE-----------------ALEIPLLPEPPLPPTSSSTTSFNMVIACGPFTPDGDLLYRP 315
Query: 375 LKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGS 434
++L+S R +P +L+LLGPF+DS H I+KG D + +IF ++ L+ +E
Sbjct: 316 FEQLLSEVSRSKPGVLLLLGPFIDSNHSLIRKGDVDHTPLQIFRHKVAGPLRRCMES-NP 374
Query: 435 EVRAILVPSIRD-ANHDFVLPQPPF-DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDV 492
+ ++VPS+RD + PQ D + + L+NP T N + + +VDV
Sbjct: 375 GMSLVVVPSVRDLISFHSAFPQAALSDAEELGLPKATICLSNPCTALMNGVTIAASSVDV 434
Query: 493 LKQLSGEE-MSRCSKDGTSNDRMEIYSLDISLMGPAF---FFYPLYPPAEGIPLDFS--- 545
L L EE + R T D M SL G FYP++PP + + D +
Sbjct: 435 LFHLRKEEFVKRIEGSTTPLDPMA------SLAGHVLSQKSFYPIFPPTKDVSSDVNLDV 488
Query: 546 LAQEALTIS-TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
L E L I T P +++LPS +K F KV++ + +NP L++G
Sbjct: 489 LCYEFLRIGPTAPAVLVLPSMLKQFHKVVN-----------DTLVINPSFLSRG 531
>gi|444315936|ref|XP_004178625.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
gi|387511665|emb|CCH59106.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
Length = 673
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 145/640 (22%), Positives = 271/640 (42%), Gaps = 100/640 (15%)
Query: 33 YNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGF--MLHLQNEQKEAIIKEEPSLHIYSS 90
+ L P +L WE + R +T+ + ++ F L +Q E+K A + +L
Sbjct: 31 HALPPDELFIKWEQFSYQRHEQHTTLNSENVEAFKEFLQVQIEKKAAQTSQTTNLGSNKK 90
Query: 91 KDVDMILNDEDENIAEDILG-TPPDNLKLYSDALDSTYK-ANANGYSSD---KPSKLVTP 145
K + N ++ + + G + P+ L L++ + ++ANG S + L T
Sbjct: 91 K----VRNVKNLGSSPSVFGFSLPNTPSLKKRKLNANHLLSSANGGGSKLAFETGDLTTD 146
Query: 146 FGRRTEKLVV------KFNINNLPNT--------ENGCIEH------DDENTEDDIIKRI 185
+++ KF + +P+T N C+ + EN E
Sbjct: 147 INNSETEMMYTPSMDSKFGTSTMPSTADSALNTPSNNCVSGKVLDSLNPENIEIAEGMEF 206
Query: 186 KTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLY--EEPTDPTV 243
T +K S++ + + R M + + L+++I + ++ DPT+
Sbjct: 207 DTEEKISVLPYYEPKKYRFRTMRQNLVESADYLDDQIESFVPIVQEHYQLSKDDFGDPTI 266
Query: 244 ASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVV 300
SQ ++AVG I D +G LN +S+ L++S G+R+ L+L ++ +FSLF GQ+V
Sbjct: 267 QSQSEIYAVGRIVPDSPTTEGFLNPESLALETSRISGIGRRISLNLTEVNDFSLFCGQIV 326
Query: 301 GIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIA 360
++G N SG + ++++ +P P ++ V +++ + + T I I+
Sbjct: 327 ALKGKNVSGDYFLVTEIL-SLPYP-NSPVSTTEDIQKLYNGKTDRTSKI--------IVT 376
Query: 361 AGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDS-------- 411
+GP+T + L E + +P +++ GPF+D +P I G +
Sbjct: 377 SGPYTPATSFDLTYLAEFVDKVNTSIKPHAIVMFGPFIDVTNPLIASGNLPNFPNVKVQP 436
Query: 412 -SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQI 469
+ DE+F + + + + S+++ +L+PS RDA PQ F+ +
Sbjct: 437 KTLDEVFS----KVIAPILSQINSKIQVVLIPSTRDALTKHAAYPQDSFNRNILQLPKNF 492
Query: 470 TSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFF 529
NP TF+ N+ GC VDV K +M +K GT R + ++
Sbjct: 493 KCFANPATFQINESFFGCSNVDVFK-----DMKEVTKGGTITLRNRFDRISEHVLNQR-R 546
Query: 530 FYPLYPPAEGIPL------------------DFSLAQEALT---ISTIPDIIILPSDMKY 568
FYP++P L D +A LT S PD++I+PS+++
Sbjct: 547 FYPVFPGGIKKKLISSSDSKDKKIYEHLSGADLEVAYLGLTEFVSSFTPDVMIIPSELQQ 606
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG-SGTFAEI 607
F +V+ + + +NPG K G G++A++
Sbjct: 607 FARVI-----------QNVIVINPGVFVKATGVRGSYAQL 635
>gi|170030752|ref|XP_001843252.1| DNA polymerase subunit alpha B [Culex quinquefasciatus]
gi|167867928|gb|EDS31311.1| DNA polymerase subunit alpha B [Culex quinquefasciatus]
Length = 417
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 158/349 (45%), Gaps = 62/349 (17%)
Query: 283 RLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQE 342
+LD KL +S+FPG+ V +EG NP G+ K VH +
Sbjct: 113 KLDFSKLKSWSVFPGETVVLEGVNPRGNLFEVRK--------------VH---YEVPLAP 155
Query: 343 IHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHP 402
+ I +P + M+I A PFT DNL ++ L +L++Y P +LIL GPF
Sbjct: 156 PPAPTTIGKP--LHMVIGAAPFTDKDNLQYDKLSDLLAYCAENNPDVLILTGPF------ 207
Query: 403 QIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIR---DANHD-----FVLP 454
G+T S D +F L I ++Y E + + + + P+ +NHD FV P
Sbjct: 208 ----GST--SNDTLF-LTIAESFEEYFEKIMANIVTSVPPTTEILIVSNHDDLQSSFVYP 260
Query: 455 QPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM 514
P+ I + L +P N + V TVDV++ LS E+S S D++
Sbjct: 261 SFPYKIS--KFYKNLHFLPDPCVVSINGMHVAITTVDVVRDLSEAELSV----APSGDKI 314
Query: 515 EIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLS 574
+ + M FYPL PP E +PLD L T+ +P+++I P D+K +++
Sbjct: 315 K---RAFNYMFHHRSFYPLNPPPESVPLDVDLLHHFGTLPRVPNVMICPGDLKPYVR--- 368
Query: 575 LGGRNEGEEQKKCVCVNPGRLAKGE-GSGTFAEIYYHGSPEMMNASIIS 622
+ CVCVNPG L + G GTFA + H PE A+ S
Sbjct: 369 --------DVNGCVCVNPGHLTDYDSGEGTFARVVVH-PPEEPTAAPFS 408
>gi|171692981|ref|XP_001911415.1| hypothetical protein [Podospora anserina S mat+]
gi|170946439|emb|CAP73240.1| unnamed protein product [Podospora anserina S mat+]
Length = 593
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 173/387 (44%), Gaps = 39/387 (10%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSV 274
L++RI + ++ EE + ASQ T + AVG I D +G LN S+LL++S
Sbjct: 210 LDDRIDDFVSLVMQHHKLEESAFGSAASQSTSEIVAVGRIASDSSEGKLNAASLLLETSR 269
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV-DVHP 333
GG RV L++ +L + FPGQ+V ++G N +GH +++D LP A D
Sbjct: 270 RMGGGLRVPLNVSRLRGYQFFPGQIVALKGVNSNGHEFTVHQILDLPLLPNAASTPDSLG 329
Query: 334 SMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILL 393
+ Q L + S P +++I A+GP+T DNL FEPLK L + A L+L
Sbjct: 330 AHIQRLRGGPDAMDSDSDPAPLNVIFASGPYTADDNLDFEPLKALCNEAADIYVDALVLT 389
Query: 394 GPFVDSEHPQIKKGTTD-------------SSFDEIFHLEILRRLQDYVEYMGSEVRAIL 440
GPF+D EHP I G D ++ +F I L + + + +L
Sbjct: 390 GPFIDMEHPLIASGDFDLPEEYLSSIDPDTATMSTVFKYLISPSL-NRLASANPSITILL 448
Query: 441 VPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGE 499
+PS+RD V PQ F + + + NP T N+I +G + DVL +L E
Sbjct: 449 IPSVRDVLDKHVSWPQDAFPRKELGLPKAAKVIGNPMTLSMNEIVLGISSQDVLFELRHE 508
Query: 500 EMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE---------------GIPLDF 544
E+ G + + ++PL+PP + G LD
Sbjct: 509 ELI-----GGRPQEPRLLERACRYLVEQRHYFPLFPPTDRKKLPKTGRGDGVGPGAVLDV 563
Query: 545 SLAQEALTISTIPDIIILPSDMKYFIK 571
+ ++ PD++++PS + F K
Sbjct: 564 GYLKLGEMVNVRPDVLVVPSSLLAFCK 590
>gi|170089217|ref|XP_001875831.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649091|gb|EDR13333.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 579
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 198/448 (44%), Gaps = 72/448 (16%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGD---GH 262
+MY++ +R L+ I A+ + + E DP+ A+ + +G + D +
Sbjct: 150 YMYEKILERSEVLDQLIEDFADLIQTHYNIPEFADPSSATDEEVTIIGRLTQDSESASAK 209
Query: 263 LNDKSVLLQSSVEHSGGQRVRLDL-HKL---------GEFSLFPGQVVGIEGSNPSGHCL 312
L + +++++SS S G RV L L H L G LFPG +V ++G N G
Sbjct: 210 LTESTLMIESSRAISNGARVPLRLDHALRIRGSVQGAGGTGLFPGAIVALKGKNGGGGYF 269
Query: 313 IASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPE----EISMIIAAGPFTTTD 368
+A++++ PL P+ LD + PE +S+ + GP+T+
Sbjct: 270 LATEVLSIPPL------KASPASCGVLDPK-------QDPEMGNDPVSICVVCGPYTSDA 316
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
+L F+P + L+ +P +L+L+GPF+DS H +IK G +D S IF I ++ +
Sbjct: 317 DLNFKPWRTLLPTLNATKPNVLLLVGPFIDSSHAKIKAGDSDLSAANIFKGRIADSIRAF 376
Query: 429 VEYMGSEVRAILVPSIRD-ANHDFVLPQPP--FDIQPPDIIHQITSLTNPGTFEANQIKV 485
+ E ++VPS+RD + V PQP +D+ P D +I L NP F N I
Sbjct: 377 L-VASPESIVLVVPSVRDLVSTHAVFPQPELDWDLFPAD--PRIHLLPNPARFSINDISF 433
Query: 486 GCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFF---------FYPLYP- 535
+VDVL L +E K G + + D+ A FYPL+P
Sbjct: 434 AVSSVDVLFHLRTQEY---IKRGVEVEALPALEGDVPSDAMANLCRHLLQQRSFYPLFPV 490
Query: 536 PAEG---IPLDFSLAQEALTIST-----IPDIIILPSDMKYFIKVLSLGGRNEGEEQKKC 587
PA+ + LD + + I PDI+ILPS +K F K +
Sbjct: 491 PADSSHEVNLDVTHSDAISMIDDGDLDYAPDILILPSRLKQFTKTV-----------HTT 539
Query: 588 VCVNPGRLAKGEGSGTFAEIYYHGSPEM 615
+NP L+K G++A I G M
Sbjct: 540 AAINPSFLSK----GSYATIDIAGRTSM 563
>gi|339251866|ref|XP_003371156.1| DNA polymerase epsilon subunit B superfamily [Trichinella spiralis]
gi|316968641|gb|EFV52899.1| DNA polymerase epsilon subunit B superfamily [Trichinella spiralis]
Length = 586
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 147/621 (23%), Positives = 254/621 (40%), Gaps = 82/621 (13%)
Query: 3 EEIKAEFQKNGFNF--VDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60
E+I +F GF F D+ +V L C N K + V W + L+ + E +V++
Sbjct: 7 EDIAQQFSYLGFMFNSADDVQVCNNILRICSNLKWKAEEFVDQWISFSLSNSMTEMSVEN 66
Query: 61 DEM--DGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKL 118
+ F L+N ++E + P + + I N E E + D+
Sbjct: 67 LNIMERNF---LRNRRQEHCGQLSPRKTFLNDSKISEISNTSFEMSKELLSAYISDH--- 120
Query: 119 YSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPN-TENGCIEHDDENT 177
D+ N+ P + +R+ + + F+ PN T + D N
Sbjct: 121 QDDSAIEDVMENSQQIELSSPCAAIL---KRSSSVKLIFSFQ--PNVTLEWIVPEMDRNI 175
Query: 178 EDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSS-GLYE 236
C ++ S R+MY++ EDR L I A++ S G +
Sbjct: 176 TVQPFN-------CKQFLYKSY-----RYMYEKLEDRMETLGKMIDSIGGAVMRSVGEGK 223
Query: 237 EPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFP 296
E S ++ G + + K V LQ +H G V LDL + ++++FP
Sbjct: 224 ELLPVDSVSDEMIYICGQVYSFSGLLKSSKDVHLQGKSDH-GFSEVTLDLSSVKQYAIFP 282
Query: 297 GQVVGIEGSNPSGHCLIASKLV--DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
GQ++ +G H A ++ + P+PV + D+ + ++
Sbjct: 283 GQIIVAKGFGLHSHIFAADEIYSGELAPIPV-----------KTFDEVVQCNLL------ 325
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFD 414
+IA GPF TD+ F L+EL++Y + + LIL+GPF +E+ + D S++
Sbjct: 326 --FVIACGPFCYTDDNNFTALQELVNYCLQVKASSLILIGPFFYNENIK-PLSQDDVSYE 382
Query: 415 EIFHLEILRRLQDYVEYMGSE-VRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ----- 468
E+ + + L + E + + I+V S +D + P PP+ ++ I +
Sbjct: 383 EL----LCKMLFNICETLSANFTNVIIVASPKDTFSSQIYPCPPYRLKWRAFIGENVEQP 438
Query: 469 --ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
+ +P + VG + D+L L EE+ + G +RM I+ +
Sbjct: 439 DNLFFAPDPCLLNVGGVIVGITSTDILWHLKNEELVEGIQQGERVNRM------ITHLLM 492
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKK 586
FYPL P + +++S + +S PDI+ILPS +FIK + K
Sbjct: 493 QRSFYPLCPSGDA-TVEYSKLKLYGELSVRPDILILPSKFHHFIKSI-----------HK 540
Query: 587 CVCVNPGRLAKGEGSGTFAEI 607
VCVNPG K + +GTFA +
Sbjct: 541 TVCVNPGNFVKAKSTGTFATM 561
>gi|320581839|gb|EFW96058.1| B subunit of DNA polymerase alpha-primase complex [Ogataea
parapolymorpha DL-1]
Length = 603
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 175/409 (42%), Gaps = 79/409 (19%)
Query: 236 EEPTDPTVASQRTLFAVGMICCDG-----DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLG 290
EE +P + SQ + VG I D D LN S+ L++S GQR++LDL L
Sbjct: 205 EEFGNPNIQSQNEILTVGRIVPDSPLTASDADLNANSLFLETSRLGGIGQRIKLDLSSLQ 264
Query: 291 EFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL---PVDAVVDVHPSMKQALDQEIHSTV 347
+S FPGQ+V G N +G ++ QIP PV + ++ A + ++
Sbjct: 265 NYSFFPGQIVCFRGQNLTGEFFKVTE-THQIPFLESPVSSAEELQSYEYGAGNMKV---- 319
Query: 348 VISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKK 406
+ AGP+T L + L E + + +P +++ GPFVD H Q+
Sbjct: 320 ----------VFTAGPYTPQRELEYTHLAEFVDKMNNEVRPDTVVMFGPFVDVNHAQVAD 369
Query: 407 GTTD--------SSFDEIFH---LEILRRLQDYVEYMGSEVRAILVPSIRDANHDF-VLP 454
GT ++ D++F ILR+L E ILVPS +DA P
Sbjct: 370 GTLHFDGLEKQPATLDDVFRAVVAPILRKL---------ECLVILVPSTKDATTKHAAYP 420
Query: 455 QPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM 514
Q FD + + + NP TF+ N+ VGC D+ K L + K+ + DR+
Sbjct: 421 QDSFDRKNLGMPKNVKCFPNPATFQLNEFLVGCSNNDIFKDLKDVAVGAPLKE-SRFDRI 479
Query: 515 EIYSLDISLMGPAFFFYPLYPPA----------------EGIPLDFSLAQEALTISTIPD 558
+ ++ +YP++P G L S A +++PD
Sbjct: 480 SGHVIEQRR------YYPVFPGGLKQKRSLKEDEQSVHISGADLHVSYMGLAEFNTSLPD 533
Query: 559 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
I+++PS++K F K++ + + VNPG + +G++ E+
Sbjct: 534 ILVIPSELKAFSKIV-----------QNVLVVNPGTFMRQNSAGSYCEV 571
>gi|195553448|ref|XP_002076668.1| GD15188 [Drosophila simulans]
gi|194202279|gb|EDX15855.1| GD15188 [Drosophila simulans]
Length = 307
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 156/331 (47%), Gaps = 61/331 (18%)
Query: 284 LDLHKLGEFSLFPGQVVGIEGSNPSGHCLIA------SKLVDQIPLPVDAVVDVHPSMKQ 337
L+ ++ S+FPGQVV +G P G + KL PL +D
Sbjct: 7 LNFSRVKSASIFPGQVVLAKGFIPRGKTFMVEEIHTERKLTPATPLQID----------- 55
Query: 338 ALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFV 397
E+ ++A+GPFT + +L++EPL +L+ Y K +P +L+L GPF+
Sbjct: 56 ---------------RELQFVVASGPFTDSTDLFYEPLHDLLKYLKDHRPDVLVLTGPFL 100
Query: 398 DSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPP 457
D++H + G +FD F + + +E +GS ++V S +DA V P PP
Sbjct: 101 DADHKMV--GELAETFDTFFE----KMIGGIMEAIGSHTAVLVVTSQKDAMALSVYPTPP 154
Query: 458 FDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIY 517
++ + L +P + + + +G + DV+ L E + + +RM
Sbjct: 155 PTLR--RTYPNLYMLPDPSLVDLDGLTLGVTSTDVVDHLLSHEFAV-----NAGERMHRA 207
Query: 518 SLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLG 576
+ G FYPLYPPA E + D LA + + +P+++ILPSD ++F+++++
Sbjct: 208 INHLFHQGS---FYPLYPPADEDMAYDSQLALKYAQLKQLPNVLILPSDQRHFVRLVN-- 262
Query: 577 GRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
C+ +NPGR+A +G GTFA
Sbjct: 263 ---------DCLVINPGRVADKKG-GTFARF 283
>gi|261189697|ref|XP_002621259.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
gi|239591495|gb|EEQ74076.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
Length = 667
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 181/401 (45%), Gaps = 63/401 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G RV L + L FPGQ+V +
Sbjct: 266 STKEIIAVGRIASDSLEGKLNTASLVLETSRRTGAGLRVPLKVDSLPSVQFFPGQIVALR 325
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + + E ++++IA+G
Sbjct: 326 GINASREYFTVFEVLS-------TPLLPPAASPPAVIQSINDRLGDNDAERALNILIASG 378
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L A + LIL+GPF+D EHP I G D +
Sbjct: 379 PFTADDNLDFEPLRALCLKAGDEYADALILMGPFLDLEHPLIASGDFDLPDVKGLDPENA 438
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDI 465
+ +F I L+ V + S + L+PS+RDA V LP+ D+
Sbjct: 439 TLSTLFRCYITPLLKQLVSTVPS-ICIFLIPSVRDAVSKHVSFPQERLPKKDLDLSQ--- 494
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLM 524
Q+ ++ NP T N+ G C+ DVL +L EE+ +G R+ Y ++
Sbjct: 495 TKQVRTVPNPVTLSLNENVFGMCSHDVLFELRQEEVVGGKPSEGGLLTRLSRYLIE---- 550
Query: 525 GPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYF 569
F P++P A G LD + + + PD++I PS + F
Sbjct: 551 --QRHFLPVFPTSARENLPKSGVEGGLATGAMLDINYLKLGEWWNARPDVLITPSILPPF 608
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+KV+ EG + +NPG L+K + +G++A++ H
Sbjct: 609 VKVV------EG-----VLVINPGTLSKRKAAGSYAQMTLH 638
>gi|322703760|gb|EFY95364.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
anisopliae ARSEF 23]
Length = 595
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 50/390 (12%)
Query: 218 LENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSV 274
L++RI + + E+ + ASQ T + AVG I D +G LN S++L++S
Sbjct: 219 LDDRIDEFITVVQDHHKLEDSAFGSAASQSTTEVVAVGRIASDSMEGRLNTASLVLETSR 278
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPS 334
G RV L + K+ +S FPGQ+V + G N +G+ + +++ +IPL +A
Sbjct: 279 RTGMGLRVPLRMDKIRTWSFFPGQIVALRGHNATGNEFVVHEIL-EIPLLPNAASTASAL 337
Query: 335 MKQALDQEIHSTVVIS--RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
H+ + S P ++++ A+GP+T DNL +EPL L S A L+L
Sbjct: 338 EAHRAKFRGHADAMDSDAEPAPLTIMYASGPYTADDNLDYEPLHALCSRAADSYADALVL 397
Query: 393 LGPFVDSEHPQIKKG---------------TTDSSFDEIFHLEILRRLQDYVEYMGSEVR 437
GPF+D +HP I G T + F +F + R +
Sbjct: 398 AGPFLDIDHPLIATGDFDLPDEAVQDPDTATMATVFKCLFAPALARACS-----ANPHLT 452
Query: 438 AILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQL 496
ILVP++RD V PQ + D+ + ++NP T N++ VG T D+L +L
Sbjct: 453 VILVPAVRDVLDKHVSWPQDAVLRRELDLPKSVRIVSNPMTLSMNEMVVGISTQDILYEL 512
Query: 497 SGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTI 556
EE+++ S D + R+ Y ++ ++PL+P AE L + +E L +
Sbjct: 513 RSEELAKTSGDLMA--RLVRYLVE------QRHYFPLFPAAERTRLPKTGTEEGLATGAV 564
Query: 557 ---------------PDIIILPSDMKYFIK 571
PD++++PS + F K
Sbjct: 565 LDVGYLKLGEMVNVRPDVMLVPSSLPPFAK 594
>gi|363746899|ref|XP_003643842.1| PREDICTED: DNA polymerase alpha subunit B-like, partial [Gallus
gallus]
Length = 238
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 117/217 (53%), Gaps = 22/217 (10%)
Query: 393 LGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV 452
GPF+D++H Q++ F E+F L +R L D G+ + + VPS RDA+HDFV
Sbjct: 20 FGPFIDTKHEQVESCRLLLPFAELFRL-CVRSLLDGTRSAGTHL--VFVPSQRDAHHDFV 76
Query: 453 LPQPPFDIQ--PPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTS 510
PQPPF P + ++ + +P T + N + +G + D+L + EE+S S GTS
Sbjct: 77 YPQPPFVCPELPKEDKARVHFMPDPCTLDINGVVLGLTSTDLLFHMGAEEIS--SSSGTS 134
Query: 511 NDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFI 570
+ I ++ FYPLYPPAE + +D+ ++ P ++I+PS+++YF+
Sbjct: 135 DRFTRILQHILTQRS----FYPLYPPAEEMNVDYESFSSFASLPVTPHVLIIPSELRYFV 190
Query: 571 KVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
K E CVC+NPGRL KG +GT+ ++
Sbjct: 191 K-----------EVLGCVCINPGRLTKGRAAGTYGQL 216
>gi|389744686|gb|EIM85868.1| DNA polymerase alpha subunit B [Stereum hirsutum FP-91666 SS1]
Length = 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 194/441 (43%), Gaps = 87/441 (19%)
Query: 205 RFMYDRTEDRFNALENRI-------RKHANALVSSGLYEEPTDPTVASQRTLFAVGMICC 257
R+MY++ +R L++RI R H N LV G DPT +++ VG I
Sbjct: 168 RYMYEKIMERSEVLDDRIDDFAEMVRDHYN-LVGLG------DPTSSTEEDCVVVGRITL 220
Query: 258 DGD------GHLNDKSVLLQSSVEHSGGQRVRLDLHK----------LGEFSLFPGQVVG 301
D + LN+ S+ L+SS G RV L +G LFPG +V
Sbjct: 221 DSESATSDSAKLNEASLCLESSRSMGSGGRVPLKFDSNVKVRGGPKDVGAVGLFPGAIVA 280
Query: 302 IEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAA 361
++G N G S+++ PL PS A + + S + SM IA
Sbjct: 281 LKGKNGGGGRFTVSEILTLPPL--------KPSSHGA-EGGVKSD---AGAAPFSMSIAC 328
Query: 362 GPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEI 421
GPFT NL ++P L+ + ++P +++L+GPF+D++HP+IK G D + E+F+
Sbjct: 329 GPFTPDANLAYQPWSSLLQKLQSEKPDVVLLVGPFIDAQHPKIKIGDIDETPVEMFYRHF 388
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEA 480
L+++++ + +LVPS+RD + PQ + +I L NP F
Sbjct: 389 TDNLREFLDGSPDSI-VLLVPSVRDMISSHAAFPQLELGAEFAG-DSRIKLLPNPCLFSL 446
Query: 481 NQIKVGCCTVDVLKQLSGEEMSR---------CSKDGTSNDRMEIYSLDISLMGPAFFFY 531
N + G +VDVL L +E+ + S +S D M S + FY
Sbjct: 447 NGLSFGVSSVDVLFHLRNQEIIKRGEEVDSVATSIGESSTDAM---SATCRHLLQQRSFY 503
Query: 532 PLYPPAEGIPLDFSLAQEALTIS--------------TIPDIIILPSDMKYFIKVLSLGG 577
P++P +P + S ++ L +S PD+I+ S +KYF KV+
Sbjct: 504 PVFP----VPFELS-SEVNLDVSHSDGLDICADNTPGVAPDVIVTSSKLKYFSKVV---- 554
Query: 578 RNEGEEQKKCVCVNPGRLAKG 598
V +NPG ++KG
Sbjct: 555 -------DHTVVINPGFVSKG 568
>gi|354546489|emb|CCE43219.1| hypothetical protein CPAR2_208640 [Candida parapsilosis]
Length = 642
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 217/459 (47%), Gaps = 97/459 (21%)
Query: 208 YDRTEDRFNALENRIRKHANAL-----VSSGLYEEPT-------DPTVASQRTLFAVGMI 255
+D T+ +F ++ ++ + A+ L ++ LY+E +P ++SQ + G I
Sbjct: 178 FDPTKFKFRTMQMKLLESADVLDDQIDSAAQLYQEHNKSSQQFGNPCLSSQFDILCCGRI 237
Query: 256 CCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHC 311
D + LN S+ L++S GQRV LDL KL FS FPGQ+V ++G NP+G
Sbjct: 238 VPDSPTYDNETLNSNSLFLETSRLSGIGQRVPLDLSKLPGFSFFPGQIVVLKGRNPTGKH 297
Query: 312 LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLY 371
+A ++ +PLP S + +Q + + +++A+GP++ ++ L
Sbjct: 298 FVAEEV---MPLPEMGTPVSSRSELEEYNQ-------FQNGQGLKILVASGPYSNSNKLQ 347
Query: 372 FEPLKELISYAKRKQ-PQLLILLGPFVDSEHPQIKKGTTD-------SSFDEIFHLEILR 423
+ L+ L+ + P L+IL GPF+D + ++++G + + D++F L I
Sbjct: 348 YTKLENLVDKINTQMLPNLVILNGPFIDLSNKEVEEGNFNFPKDQQPKNLDDVFRLLITP 407
Query: 424 RLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEAN 481
L+ + ++++ +L PS++D+ NH PQ FD + ++ + NP +F N
Sbjct: 408 ILKK----IDTKIQVVLFPSLKDSCVNH-CSFPQDSFDRKKFNLPKNVKIFPNPSSFAVN 462
Query: 482 QIKVGCCTVDVLKQLSGEEMSRCSKDGT-SNDRMEIYSLDISLMGPAF---FFYPLYPP- 536
+I +G +D+ K L +E+ + DG SN+R E ++G F +YP+ P
Sbjct: 463 EILIGSSNLDLFKDL--KEVFK--NDGKLSNNRFE------RVIGHLFEQRRYYPIMPGS 512
Query: 537 -AEGIPLDFS-----LAQEALT-------------------ISTIPDIIILPSDMKYFIK 571
A+ D S A E LT +++PD++ILPS++K F K
Sbjct: 513 IAKTHEQDISELSNGAAGEKLTGVSVGGSSLETPYLGLTELGNSLPDVLILPSELKVFAK 572
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGS-----GTFA 605
V+ K V +NPG+ + S GT+A
Sbjct: 573 VV-----------KGVVLINPGQFIRPSRSINTEDGTYA 600
>gi|258567182|ref|XP_002584335.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905781|gb|EEP80182.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 583
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 161/358 (44%), Gaps = 45/358 (12%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S R + AVG I D +G LN S++L+ S G RV L + L FPGQ+V I+
Sbjct: 225 STREIIAVGRIASDSSEGRLNTASLVLEMSRRTGAGLRVPLKVDSLPSVQFFPGQIVAIK 284
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N SG A +++ LP A A + + S E +++++A+GP
Sbjct: 285 GINASGEYFSAIEVLSTPLLPPAAST-------LATINSTNERLSGSGSEPLNVLLASGP 337
Query: 364 FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------SS 412
+TT DNL FEPL L + A + +++L GPF+D EHP + G D S+
Sbjct: 338 YTTDDNLDFEPLNALCAKAAEQSADMVLLTGPFLDIEHPLLATGDFDLPDIPGIDPDSST 397
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITS 471
+F I R L + S + +LVPS+RDA N PQ + + Q+
Sbjct: 398 LSVLFKHCISRPLHQLTMAVPS-ITIVLVPSVRDAVNKHVSWPQEMLPKRELGLPKQVRM 456
Query: 472 LTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN--DRMEIYSLDISLMGPAFF 529
+ NP T N+ G C+ DVL +L EE+ K +N R+ Y ++
Sbjct: 457 VPNPVTISLNESIFGLCSHDVLYELRTEEI-LGGKPTETNLLTRLPRYLIE------QRH 509
Query: 530 FYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
F P++PP A G LD + + PD++I PS + F++V
Sbjct: 510 FSPVFPPSARERLPRAGTEDGVATGAMLDLRYLKLGEWWNVRPDVLITPSTLPPFVRV 567
>gi|409040116|gb|EKM49604.1| hypothetical protein PHACADRAFT_166969 [Phanerochaete carnosa
HHB-10118-sp]
Length = 567
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 184/437 (42%), Gaps = 76/437 (17%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDG--- 261
R+MY + +R AL+++I + A + S EE DP +++ VG I D D
Sbjct: 156 RYMYQKISERGEALDDQIEETAELVQSFYNIEEFGDPAKSTEEETTIVGRIVFDADSTSA 215
Query: 262 ---HLNDKSVLLQSSVEHSGGQRVRLDL----------HKLGEFSLFPGQVVGIEGSNPS 308
LN+ ++ L++S G RV L L +G FPG +V + GSN
Sbjct: 216 SAVKLNEATLTLEASRSMGSGVRVSLRLDPNVRLKGAKKGIGGVGFFPGAIVALRGSNGG 275
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G +++ +PLP + + + S+ +A GPFT
Sbjct: 276 GGWFTVTEV---LPLP-----------------SLPAPTALGSNGSFSVSVACGPFTADA 315
Query: 369 NLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY 428
+L +EP K L++ K ++P+++I++GPF+D H K G D F IL LQ
Sbjct: 316 DLSYEPWKLLLAKWKTEKPEIIIIVGPFIDCMHALWKNGEVDEPPIAQFRSMILEPLQQL 375
Query: 429 VEYM-GSEVRAILVPSIRDANHDF-VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVG 486
++ + G+ V ++VPS+RD D+ V PQ D +I S+ NP N +
Sbjct: 376 LDSLPGTSV--VVVPSVRDLISDYAVFPQAELASSVFD-DPRIYSIPNPSQLSLNGVSFA 432
Query: 487 CCTVDVLKQLSGEE----MSRCSKDGTSNDRMEIYSLDISLMGPAF---FFYPLYPPAEG 539
+VDVL L EE MS S + + L FYP++PP
Sbjct: 433 VSSVDVLFHLRKEEFFKPMSEISSAPLAENETPASDAMAKLCRHVLQQRSFYPIFPP--- 489
Query: 540 IPLDF---------SLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
PLD + L T P ++ILPS +K F K + + V V
Sbjct: 490 -PLDLVNEVNLDVTHSGKLKLAEDTAPLVLILPSKLKQFHKTVD-----------ETVAV 537
Query: 591 NPGRLAKGEGSGTFAEI 607
NP K GT+A I
Sbjct: 538 NPSFATK----GTYANI 550
>gi|322696184|gb|EFY87980.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
acridum CQMa 102]
Length = 616
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 180/398 (45%), Gaps = 50/398 (12%)
Query: 210 RTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT--LFAVGMICCDG-DGHLNDK 266
+ D L++RI + + E+ + ASQ T + AVG I D +G LN
Sbjct: 228 KLSDASEILDDRIDEFITVVQDHHKLEDSAFGSAASQSTTEVVAVGRIASDSMEGRLNTA 287
Query: 267 SVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVD 326
S++L++S G RV L + K+ +S FPGQ+V + G N +G+ + +++ +IPL +
Sbjct: 288 SLVLETSRRTGMGLRVPLRMDKIRAWSFFPGQIVALRGHNATGNEFVVHEIL-EIPLLPN 346
Query: 327 AVVDVHPSMKQALDQEIHSTVVIS--RPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
A H+ + S P ++++ A+GP+T DNL +EPL L S A
Sbjct: 347 AASTASALEAHRAKFRGHADAMDSDAEPAPLTIMYASGPYTADDNLDYEPLHALCSQAAD 406
Query: 385 KQPQLLILLGPFVDSEHPQIKKGTTD---------------SSFDEIFHLEILRRLQDYV 429
L+L GPF+D +HP I G D + F +F ++R
Sbjct: 407 SYADALVLAGPFLDIDHPLIATGDIDLPEEAVQDPDTATLITVFKYLFAPALVRACS--- 463
Query: 430 EYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCC 488
+ IL+PS+RD V PQ + D+ + ++NP T N++ +G
Sbjct: 464 --ANPHLSVILIPSVRDVLDKHVSWPQDAVLRRELDLPKSVKIVSNPMTLSMNEMVMGVS 521
Query: 489 TVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQ 548
+ D+L +L EE+++ S D + R+ Y ++ ++PL+P AE L + +
Sbjct: 522 SQDILYELRSEELAKTSGDLMT--RLVRYLVEQR------HYFPLFPAAERTRLPKTGTE 573
Query: 549 EALTISTI---------------PDIIILPSDMKYFIK 571
E L + PD++++PS + F K
Sbjct: 574 EGLATGAVLDIGYLKLGEMVNVRPDVMLVPSCLPPFAK 611
>gi|367037905|ref|XP_003649333.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
gi|346996594|gb|AEO62997.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
Length = 515
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 187/421 (44%), Gaps = 79/421 (18%)
Query: 244 ASQRT--LFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVV 300
ASQ T + AVG I D +G LN S++L+SS G RV L+L KL + FPGQ+V
Sbjct: 92 ASQGTAEIVAVGRIASDSLEGKLNAASLVLESSRRMGNGLRVPLNLSKLKAYQFFPGQIV 151
Query: 301 GIEGSNPSGHCLIASKLVDQIPLP--VDAVVDVHPSMKQ------ALDQEIHSTVVISRP 352
++G N SG +++D LP A D+ + + A+D + S P
Sbjct: 152 ALKGINSSGREFTVHEVLDIPLLPNAASAPSDLAAHLSRLRGGPDAMDAD-------SDP 204
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-- 410
++++ A+GP+T DNL FEPL L + A ++L GPF+D +HP I G D
Sbjct: 205 LPLTILFASGPYTADDNLDFEPLHTLCNEAADTFVDAVVLTGPFIDIDHPLIAAGDFDLP 264
Query: 411 --SSFD-------EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDI 460
+S+D F I L + + V +LVPS+RDA V PQ F
Sbjct: 265 PEASYDPDTATLATAFKYLISPAL-NRLAAANPAVTILLVPSVRDALDKHVSWPQDAFPR 323
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSND---RMEIY 517
+ + + NP T N+ +G + DVL +L EE+ + + D R Y
Sbjct: 324 RELGLPKTARVVGNPMTLSINEAVLGISSQDVLWELRHEELVGGAAVAAAPDVLSRASRY 383
Query: 518 SLDISLMGPAFFFYPLYP-------PAEGI---------------------PLDFSLAQE 549
L+ ++PL+P P G LD S +
Sbjct: 384 LLEQR------HYFPLFPSVDRRRLPKTGAVVTTGENGGGGAGGGGMPPGAMLDVSYLKL 437
Query: 550 ALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYY 609
++ PD++++PS + F KV+ + + +NPG L+K G+GT+A++
Sbjct: 438 GEMVNVRPDVLVVPSALPPFAKVV-----------ESVLVINPGYLSKRRGAGTYAKMTL 486
Query: 610 H 610
+
Sbjct: 487 Y 487
>gi|239612976|gb|EEQ89963.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis ER-3]
Length = 667
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 180/401 (44%), Gaps = 63/401 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G RV L + L FPGQ+V +
Sbjct: 266 STKEIIAVGRIASDSLEGKLNTASLVLETSRRTGAGLRVPLKVDSLPSVQFFPGQIVALR 325
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + + E ++++IA+G
Sbjct: 326 GINASREYFTVFEVLS-------TPLLPPAASPPAVIQSINDRLGDNDAERALNILIASG 378
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L A + LIL GPF+D EHP I G D +
Sbjct: 379 PFTADDNLDFEPLRALCLKAGDEYADALILTGPFLDLEHPLIASGDFDLPDVKGLDPENA 438
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDI 465
+ +F I L+ V + S + L+PS+RDA V LP+ D+
Sbjct: 439 TLSTLFRCYITPLLKQLVSTVPS-ICIFLIPSVRDAVSKHVSFPQERLPKKDLDLSQ--- 494
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLM 524
Q+ ++ NP T N+ G C+ DVL +L EE+ +G R+ Y ++
Sbjct: 495 TKQVRTVPNPVTLSLNENVFGMCSHDVLFELRQEEVVGGKPSEGGLLTRLSRYLIE---- 550
Query: 525 GPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYF 569
F P++P A G LD + + + PD++I PS + F
Sbjct: 551 --QRHFLPVFPTSARENLPKSGFEGGLATGAMLDINYLKLGEWWNARPDVLITPSILPPF 608
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+KV+ EG + +NPG L+K + +G++A++ H
Sbjct: 609 VKVV------EG-----VLVINPGTLSKRKAAGSYAQMTLH 638
>gi|393233321|gb|EJD40894.1| DNA polymerase alpha, subunit B [Auricularia delicata TFB-10046
SS5]
Length = 529
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 166/383 (43%), Gaps = 61/383 (15%)
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHK---------LGE--FSLFPG 297
+ VG ICCD D +N+ S++L+ S E G RV + G+ +FPG
Sbjct: 180 VIVVGRICCDEDAKINEASIVLEVSREIGSGARVPIKFAPNVAMRGGLPAGQTGMGVFPG 239
Query: 298 QVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISM 357
+ G N G + +++ +PLP P +A RP++ +
Sbjct: 240 AMAAFRGRNGGGGWFVVNEI---LPLPK------LPRKDEA------------RPDDARI 278
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQ--LLILLGPFVDSEHPQIKKGTTDSSFDE 415
+AAGP+T + + FEPL+ L+ + QP+ L+LLGPFVD+ H IK G D E
Sbjct: 279 CVAAGPYTYSKDFKFEPLQRLLQRVLQSQPRPTTLLLLGPFVDANHELIKLGDVDEHPRE 338
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRD--ANHDFVLPQPPFDIQPPDIIHQITSLT 473
F E+L RL+ G +V LVPS+RD +NH V PQ + + + L
Sbjct: 339 TFRREVLDRLR---ALRGIDV--FLVPSVRDVVSNHA-VFPQGELR-EEWALPQNVRMLP 391
Query: 474 NPGTFEANQIKVGCCTVDVLKQLSGEEMSR-CSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
NP ++V +VDVL Q+ EE + S G D I FYP
Sbjct: 392 NPCVTTIGGLRVAATSVDVLFQIKKEEFVKDLSAGGGKADSFANLGRHILEQRS---FYP 448
Query: 533 LYPPAEG---IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVC 589
L+P + LD + ++ + PD+++LPS F K + C
Sbjct: 449 LFPAPRDDNEVNLDVTHSELLGIAAPAPDVLVLPSKFVQFHK-----------DVDGCAV 497
Query: 590 VNPGRLAKGEGSGTFAEIYYHGS 612
VNP + + G +AE+ G
Sbjct: 498 VNPSFCGRTDSLGGYAEVVCRGG 520
>gi|324508966|gb|ADY43781.1| DNA polymerase alpha subunit B [Ascaris suum]
Length = 607
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 168/367 (45%), Gaps = 43/367 (11%)
Query: 245 SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
S F G I + L + ++S E + V LDL KL EFSLFPG+VV ++G
Sbjct: 249 STEPFFVCGQIVDENGERLEEAGCCIRSDDEEA--TMVHLDLSKLPEFSLFPGKVVALKG 306
Query: 305 SNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
+N G ++L + A + + P ++Q +H + AAGPF
Sbjct: 307 TNEDGSTFTPTELFEP------AKMQISPVIRQPGIDRLH------------VWCAAGPF 348
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR 424
T+ D L +E L +L+ AK+++P +L+L+GP VD + +F E+ IL
Sbjct: 349 TSADTLSYEQLFDLLELAKKERPHVLVLMGPIVDRTSAAVLSPHVSLTFTELLENLIL-N 407
Query: 425 LQDYVEYMGSEVRAILVPS-IRDANHDFVLPQPPFDIQ---PPDIIHQITSLTNPGTFEA 480
+ +E ++V+ +L+PS +DA + P PF+I + I +P
Sbjct: 408 VSKMME--STDVQILLIPSGKKDATVIPIFPTAPFEISRNCKKSLSENILFGADPSQISI 465
Query: 481 NQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGI 540
++ ++++ + EE+ R S + DRM + S + YPLYPP +
Sbjct: 466 AGVQFALTNSEIMQVMGREEIHR-SPTAENEDRMARIA---SHLVRQRSLYPLYPPPVNV 521
Query: 541 PLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG 600
+ ++ IP ++I+PS + IK + C+C+NPG LA+G G
Sbjct: 522 AQRCAETIRRCALNVIPHVMIVPSLLAPMIKAVD-----------GCICINPGVLARGNG 570
Query: 601 SGTFAEI 607
GTF ++
Sbjct: 571 -GTFMKM 576
>gi|358057840|dbj|GAA96342.1| hypothetical protein E5Q_03008 [Mixia osmundae IAM 14324]
Length = 2172
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 203/463 (43%), Gaps = 64/463 (13%)
Query: 190 KCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVS--SGLYEEPTDPTVASQR 247
K L H R+MY++ R L+N+I + A L S E+ +P V
Sbjct: 1694 KLELASHADPKSYDYRYMYEKLLARSEVLDNQIDQCATLLCHEYSISLEDVGNPCVPCMD 1753
Query: 248 TLFAVGMICCDGD-GHLNDKSVLLQSSVEHSGGQRVRL----DLHKLG------EFSLFP 296
+ VG +C + D LND S+ +SS S G RV L DL G +P
Sbjct: 1754 DIVCVGRVCLESDTAKLNDASIWFESSRLLSSGSRVPLKFEQDLKVRGGVPGENAVGFYP 1813
Query: 297 GQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS 356
G ++G+ G N G +++ P V+ + + ++ + + P +S
Sbjct: 1814 GLLLGLRGRNTGGGHFSVKEILLMPP-----VLSPMTAPAKLMEYQHGEQSMAGLP--MS 1866
Query: 357 MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEI 416
+I+A GP+T +L + PL++L + +P L+ILLGPF+D HP I++G +I
Sbjct: 1867 IIVANGPYTLDGDLEYTPLEDLSQSIMKLKPHLVILLGPFIDGNHPLIRQGAMLEPPKQI 1926
Query: 417 FHLEILRRLQDYVEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPP-DIIHQITSLTN 474
F ++ R+Q ++ + + + +LVPS+RD N PQ P+ + + + L N
Sbjct: 1927 FRNKVATRIQAMLDAVPA-LTILLVPSLRDLLNAHVAFPQSPYAREAELGLSKRAKLLPN 1985
Query: 475 PGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPA------- 527
P F N++ G +VD L L E + + + R E ++D + A
Sbjct: 1986 PTVFSVNEVTFGITSVDSLFHLRSSEHVQAA----TPVRDEAQAMDAEPVANAKDALSRA 2041
Query: 528 -------FFFYPLYP-------PAEG---IPLDFSLAQEALTISTIP-DIIILPSDMKYF 569
FYPL+P P E + LD + Q+ L I D++ILPS +K F
Sbjct: 2042 CRHILRQRTFYPLFPAPVLKGRPGEADEILNLDVT-HQDLLQIGNDGVDVLILPSRLKAF 2100
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGS 612
K++ V +NP L KG GTFA + H S
Sbjct: 2101 AKIVD-----------GVVTINPASLTKGHSGGTFARLTIHPS 2132
>gi|327352151|gb|EGE81008.1| hypothetical protein BDDG_03949 [Ajellomyces dermatitidis ATCC
18188]
Length = 496
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 180/401 (44%), Gaps = 63/401 (15%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G RV L + L FPGQ+V +
Sbjct: 95 STKEIIAVGRIASDSLEGKLNTASLVLETSRRTGAGLRVPLKVDSLPSVQFFPGQIVALR 154
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + + E ++++IA+G
Sbjct: 155 GINASREYFTVFEVLS-------TPLLPPAASPPAVIQSINDRLGDNDAERALNILIASG 207
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L A + LIL GPF+D EHP I G D +
Sbjct: 208 PFTADDNLDFEPLRALCLKAGDEYADALILTGPFLDLEHPLIASGDFDLPDVKGLDPENA 267
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV------LPQPPFDIQPPDI 465
+ +F I L+ V + S + L+PS+RDA V LP+ D+
Sbjct: 268 TLSTLFRCYITPLLKQLVSTVPS-ICIFLIPSVRDAVSKHVSFPQERLPKKDLDLSQ--- 323
Query: 466 IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCS-KDGTSNDRMEIYSLDISLM 524
Q+ ++ NP T N+ G C+ DVL +L EE+ +G R+ Y ++
Sbjct: 324 TKQVRTVPNPVTLSLNENVFGMCSHDVLFELRQEEVVGGKPSEGGLLTRLSRYLIE---- 379
Query: 525 GPAFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYF 569
F P++P A G LD + + + PD++I PS + F
Sbjct: 380 --QRHFLPVFPTSARENLPKSGFEGGLATGAMLDINYLKLGEWWNARPDVLITPSILPPF 437
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYH 610
+KV+ EG + +NPG L+K + +G++A++ H
Sbjct: 438 VKVV------EG-----VLVINPGTLSKRKAAGSYAQMTLH 467
>gi|297688192|ref|XP_002821573.1| PREDICTED: DNA polymerase alpha subunit B-like, partial [Pongo
abelii]
Length = 221
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 24/219 (10%)
Query: 393 LGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV 452
GPF+D++H Q++ S F++IF + LR + + GS + + +PS+RD +H+ V
Sbjct: 1 FGPFLDAKHEQVENCLLTSPFEDIFK-QCLRTIIEGTRSSGSHL--VFIPSLRDVHHEPV 57
Query: 453 LPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGT 509
PQPPF D+ D Q+ ++ P + N + G + D+L L EE+S S GT
Sbjct: 58 YPQPPFSYSDLSREDK-KQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEIS--SSSGT 114
Query: 510 SNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYF 569
S+ I ++ +YPLYPP E + +D+ + + PD++I+PS+++YF
Sbjct: 115 SDRFSRILKHILTQRS----YYPLYPPQEDMAIDYEMFYVYAQLPVTPDVLIIPSELRYF 170
Query: 570 IKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIY 608
+K + LG CVCVNPGRL KG+ GTFA +Y
Sbjct: 171 VKDV-LG----------CVCVNPGRLTKGQVGGTFARLY 198
>gi|260945677|ref|XP_002617136.1| hypothetical protein CLUG_02580 [Clavispora lusitaniae ATCC 42720]
gi|238848990|gb|EEQ38454.1| hypothetical protein CLUG_02580 [Clavispora lusitaniae ATCC 42720]
Length = 650
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 185/413 (44%), Gaps = 87/413 (21%)
Query: 240 DPTVASQRTLFAVGMICCDGDGH-------LNDKSVLLQSSVEHSGGQRVRLDLHKLGEF 292
+P ++SQ + G I D + LNDKS+ L++S GQR+ LD+ L E+
Sbjct: 220 NPCMSSQSDIVCCGRIVPDSPMYDSMVFQNLNDKSLYLETSRLGGIGQRIPLDISNLDEY 279
Query: 293 SLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP 352
S FPGQ+VG++G NP+G + +++ PL A S L++ +
Sbjct: 280 SFFPGQIVGLKGRNPTGRTFVVHEVLSLPPLGQSA------SPLSELEENAK------KG 327
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTD- 410
E + IA+GPF+ L + L+ L+ + +P+++ILLGPF+D + ++ G +
Sbjct: 328 EGFKVFIASGPFSNQHTLNYSKLESLVDHINDNIKPEVVILLGPFLDITNKSVESGDIEL 387
Query: 411 ---------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDI 460
+ DE+F + + L+ + ++++ IL+PS++D+ N PQ FD
Sbjct: 388 PNLPSNQQPKNLDELFKMAVAPILKK----IDTQIQVILIPSLKDSINTHASYPQAGFDR 443
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
+ + NP TF N+ G VD+ K L + G + ++ ++YS
Sbjct: 444 KKLGLPKNFKCFPNPSTFSVNEATFGVSNVDLFKDL------KDVYKGGNPEKSKLYSNR 497
Query: 521 ISLMGPAFF----FYPLYPPA--------EGIP-----LDFSLAQEALTI---------- 553
+ F FYP++P + E + + S+++E +
Sbjct: 498 FERIVDHVFKQRRFYPMFPGSIKRSMLGKEDVETMTNLFEGSMSEELVETDVGGSSLEVP 557
Query: 554 --------STIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKG 598
+PDI I PS+++YF KV++ V +NPG++ +
Sbjct: 558 YMGLTELGDVLPDIFIAPSELRYFAKVIN-----------GVVVINPGQVIRA 599
>gi|294659121|ref|XP_461461.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
gi|202953633|emb|CAG89880.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
Length = 702
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 190/415 (45%), Gaps = 81/415 (19%)
Query: 240 DPTVASQRTLFAVGMICCD-------GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEF 292
+P + SQ + G I D G+ LN ++ L++S GQR+ L++++L E+
Sbjct: 269 NPCLCSQFDILCCGRIVPDSPLYDKSGNQALNATTLYLETSRLTGIGQRIPLNMNQLEEY 328
Query: 293 SLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP 352
+ FPGQ+V ++G NP+G I ++ +P P + S +Q LD+ T
Sbjct: 329 TFFPGQIVCLKGRNPTGQSFIVQEV---LPFP---ELGAPLSNRQELDEYKEMT----ND 378
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTD- 410
+ + +A+GP++ +L ++ L L+ + +P L+IL GPF+D + + KG +
Sbjct: 379 SGLKLFVASGPYSNQHSLNYDRLNALVDRINTEIKPHLVILFGPFIDITNVSVSKGDIEL 438
Query: 411 -------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDAN-HDFVLPQPPFDIQP 462
DE+F + + + + ++ +++PS++D++ PQ FD +
Sbjct: 439 PDEKHQPKDLDEVFR----KCITPIIRKVNPRIQVVMIPSLKDSSIKHCSYPQDSFDKKK 494
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTS---NDRMEIYSL 519
+ + NP +F N++ VGC +D+ K L +++ + + DG S N+R E +
Sbjct: 495 FGLPKNVKIFPNPSSFSINEVLVGCSNLDIFKDL--KDVFKGATDGNSKFLNNRFERIA- 551
Query: 520 DISLMGPAFFFYPLYPPA------------EGIPLDFSLAQEALTIS------------- 554
+ + +YP++P + L L E LT +
Sbjct: 552 --NHVFEQRRYYPVFPGSMKKNMVSKDNDDSATSLHEGLMGEELTDTGIGGSSLEVPYMG 609
Query: 555 ------TIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGT 603
++PDI+++PS++K+F+KV+ K + +NPG +G T
Sbjct: 610 LTELGDSLPDILVIPSELKFFVKVI-----------KGVIVINPGSFIRGNRDQT 653
>gi|50304257|ref|XP_452078.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641210|emb|CAH02471.1| KLLA0B12309p [Kluyveromyces lactis]
Length = 649
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 195/445 (43%), Gaps = 63/445 (14%)
Query: 209 DRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD---GDGHLND 265
D +++ + I+KH N S + DPT Q ++ VG I D +G LN
Sbjct: 219 DVLDEQIDIFSEIIQKHYNLKPS-----DIGDPTFQQQSEVYTVGRIVPDSVNAEGPLNV 273
Query: 266 KSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPV 325
S+ +++S G+R+RL+ K+ S+FPGQ+V ++G N +G + ++ +IP
Sbjct: 274 DSLAIETSRSTGIGRRIRLNFEKIQNLSVFPGQIVALKGKNANGEYFVVEDIL-KIPYLN 332
Query: 326 DAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
V D + + + + + + +++ AG +T +NL F L+ +
Sbjct: 333 SPVSD---------SEMLQDSQITLNNQPMKVVVTAGSYTPANNLDFSNLEHFVDRINTS 383
Query: 386 -QPQLLILLGPFVDSEHPQIKKGTT---------DSSFDEIFHLEILRRLQDYVEYMGSE 435
+P +LI+ GPF+D H I G + DE+F ++ + ++ + +
Sbjct: 384 IKPHILIMFGPFLDITHQLISSGNIPDFPNLKQQPKTLDEVF----IKVIAPILKRINPK 439
Query: 436 VRAILVPSIRDANHDF-VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLK 494
++ IL+PS ++ PQ D + + TNP TF+ N+I GC D+ K
Sbjct: 440 IQVILIPSTKEVTSKHAAYPQDSLDRKYLSLPKNFKCFTNPSTFQLNEIFFGCSNNDIYK 499
Query: 495 QLSGEEMSRCSKDGTSN--DRMEIYSLDISLMGPAF------------FFYPLYPPAEGI 540
L +E+++ N DR+ + L+ P F P++ G
Sbjct: 500 DL--KEVTKGGNVFQRNRFDRVSEHILEQRRYYPVFPGGIRTRKVEGKNGKPVFEHIAGA 557
Query: 541 PLDFS-LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK-G 598
LD L IPD+I++PS++ +F +V+ + + +NPG +
Sbjct: 558 DLDLPYLGLTEFIGGIIPDVILIPSELTHFARVV-----------QNVIMLNPGSFIRPN 606
Query: 599 EGSGTFAEIYYHGSPEMMNASIISI 623
G GT+ E+ +P+M N + +
Sbjct: 607 GGRGTYIEMSIE-APDMENEKMTKV 630
>gi|393218941|gb|EJD04429.1| DNA polymerase alpha, subunit B [Fomitiporia mediterranea MF3/22]
Length = 548
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 193/452 (42%), Gaps = 91/452 (20%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDG--- 261
R+M+++T +R L++RI + A + ++ DP+ S+ + VG IC D D
Sbjct: 132 RYMHEKTSERSEILDDRIDEFAELIREHYNIDDLGDPSSTSEDNIVTVGRICIDVDAATS 191
Query: 262 -HLNDKSVLLQSSVEHSGGQRVRLDL----------HKLGEFSLFPGQVVGIEGSNPSGH 310
L +++ L++S G R+ L G LF G +V + G N G+
Sbjct: 192 AKLTGENIFLETSRMMGSGSRISLRFSANLKLRGAPQGAGSAGLFSGAIVALRGRNGGGN 251
Query: 311 CLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNL 370
VD ++ + PS+ + + H + ++++A GP+T+ +L
Sbjct: 252 FFA-----------VDEILAL-PSLTPSPEPADH--------KAFTLVMACGPYTSDSDL 291
Query: 371 YFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
F+ L L+ +P +L+LLGPF+D HP IK G D +IFH + L+ ++
Sbjct: 292 GFKQLGSLMEKLLSSKPSVLVLLGPFLDIAHPIIKSGDIDEMPLDIFHRCFVEPLRSFL- 350
Query: 431 YMGSEVRAILVPSIRDANHDF-VLPQPPFD---IQPPDIIHQITSLTNPGTFEANQIKVG 486
+ E ++ PSIRD D V PQ FD P ++ + NP F N + G
Sbjct: 351 HASPESLVLVEPSIRDLLSDHPVYPQCEFDNNLFADP----RVKMIPNPCRFSINDVSFG 406
Query: 487 CCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP----------AFFFYPLYP- 535
+VDVL L +E ++ GT D + S + S P FYP++P
Sbjct: 407 STSVDVLFHLRNQEY---AQRGTPVDPVPPVSPESSGADPLTNACRHLLSQRSFYPIFPV 463
Query: 536 PAE-------------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGE 582
PA+ G+ LD S Q A PD+I LPS +K F K+
Sbjct: 464 PADLSSDVNLDVSHSGGLRLDTSNEQHA------PDVIFLPSKLKQFAKM---------- 507
Query: 583 EQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
+NP L K GT+A I +P
Sbjct: 508 -ADGTWAINPSFLTK----GTYASISVPDTPR 534
>gi|312374432|gb|EFR21988.1| hypothetical protein AND_15916 [Anopheles darlingi]
Length = 575
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 63/339 (18%)
Query: 280 QRVRLDLHKL-GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQA 338
+ +LDL +L G +SLFPGQ V +EG NP G + VH
Sbjct: 237 RHTQLDLSQLRGPWSLFPGQTVLLEGINPRGTLFTVQR--------------VHHERILT 282
Query: 339 LDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD 398
L + ++ + RP ++M+IA+ PFT D+L +E L L+ Y P +L+L GPF D
Sbjct: 283 LPRPPYT---LERP--LTMVIASAPFTGRDDLLYERLTGLLQYCATDPPDVLLLCGPFAD 337
Query: 399 SEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHD-----FVL 453
+ + +F E F +I+ + V +EV + ANHD FV
Sbjct: 338 ASCSLYSE--VAETFQEYFE-KIVGTIMGAVGSTRTEVFIV-------ANHDEVTGSFVY 387
Query: 454 PQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDR 513
P PP+ + + + L +P F +++G TVD ++ L E CS D + D+
Sbjct: 388 PTPPYRVA--NFYKNLHFLPDPCLFSIEGLEIGVTTVDTVRHLLDGEC--CSAD--AGDK 441
Query: 514 MEIYSLDISLMGPAFF---FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFI 570
++ G F FYPL PP E +P+D + E ++ +P++++ PS + F+
Sbjct: 442 IK------RAFGHIFHQASFYPLNPPPEDMPVDVDMLNEFGRLTRVPNVMVCPSSLNRFV 495
Query: 571 KVLSLGGRNEGEEQKKCVCVNPGRL--AKGEGSGTFAEI 607
+ E CVC+NPG L + +GSG++A +
Sbjct: 496 R-----------EINGCVCINPGFLDCHETDGSGSYARL 523
>gi|344228522|gb|EGV60408.1| hypothetical protein CANTEDRAFT_110389 [Candida tenuis ATCC 10573]
Length = 673
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 176/412 (42%), Gaps = 87/412 (21%)
Query: 240 DPTVASQRTLFAVGMICCDGDGH-----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSL 294
+P ++SQ ++ G I D + LN S+ L++S GQRV LDL +L E+S
Sbjct: 241 NPCLSSQFDIYCCGRIVPDSPSYDYSQSLNATSLNLETSRLAGIGQRVPLDLSQLKEYSF 300
Query: 295 FPGQVVGIEGSNPSGHCLIASKLVDQIPLP-VDAVVDVHPSMKQALDQEIHSTVVISRPE 353
FPGQ+V ++G NP+G + +++ LP + + +K D ++
Sbjct: 301 FPGQIVCLKGRNPAGSQFVVQEVLG---LPELGTPITPESELKDFKD-------MVGESS 350
Query: 354 EISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTD-- 410
I ++AAGP++ + L + + + QP L++L GPFVD + + +G +
Sbjct: 351 GIKFVMAAGPYSNQNVLNYSKFSSFVDRINSEIQPDLVVLFGPFVDLNNKSVLEGDIEFP 410
Query: 411 ------SSFDEIFH---LEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDI 460
+ DE+F IL+R+ S ++ IL+PS+RDA PQ FD
Sbjct: 411 DNGEEPQNLDEVFKKLVTPILKRIN-------SNIQVILLPSLRDATVKHCSFPQDSFDR 463
Query: 461 QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD 520
+ + I + NP F N+I GC +DV K L K +S D I+S
Sbjct: 464 KSLGLPKNIRAFPNPSGFAINEILFGCSNLDVFKDLKD-----VIKLDSSGDNTNIFSNR 518
Query: 521 ISLMGPAFF----FYPLYPPA-------------------------------EGIPLDFS 545
+ F ++P +P + G L+ S
Sbjct: 519 FERITNHIFEQRRYHPGFPGSVAKKQISKEEVSKTARQTGGLMAEEVAETRIGGSCLEVS 578
Query: 546 LAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
A T+PD++I+PS++KYF K++ K V +NPG +
Sbjct: 579 YMGLAELGDTLPDVLIIPSELKYFAKIV-----------KNVVTINPGMFIR 619
>gi|443894558|dbj|GAC71906.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Pseudozyma antarctica T-34]
Length = 711
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 164/687 (23%), Positives = 263/687 (38%), Gaps = 145/687 (21%)
Query: 22 VLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKE 81
+L + + C +Y + P DL WE + N +L +S + + + +
Sbjct: 24 LLSETTSICTHYAVSPEDLFYKWEAFAFNHKLPKSEPLTVDHARELRKIVAASVNTASTD 83
Query: 82 EPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTYKANANGYSSDKP-S 140
S + S ++ D N I GTP S S ++ +S P +
Sbjct: 84 ATSTPLKPSAALNRAKVAPDLNAMLGIKGTP-------SKGGPSAFQTPVRAATSGSPFA 136
Query: 141 KLVTPFG---------RRTEKLVVKFNINNLPNTEN-----------GCIEHDDENTE-- 178
+ TP R E VV +I++ + +E +E+ E
Sbjct: 137 QAATPTASAYRPAVSARAVETDVVMSDIDSPSRAPSAAGAASSKPAFSVLESLNEHLELS 196
Query: 179 ---DDIIKRIKTGKKCSLMVH-GSGPEPGC---RFMYDRTEDRFNALENRIRKHANALVS 231
+ + GKK + V +P R+M+++ ++R L++RI ++A+ L S
Sbjct: 197 GSGSQLAPPPQAGKKVATRVSLAMATDPKAWNYRYMFEKKDERSQVLDDRIDEYASLLRS 256
Query: 232 SGLY--EEPTDPTVASQRTLFAVGMIC---------------------CDGD------GH 262
+ EE DP++ SQ ++ VG IC G+
Sbjct: 257 AYALDDEELGDPSLPSQEPIWVVGRICPALPAPESSAGLAVRAKATLRTGGEEDAFALPK 316
Query: 263 LNDKSVLLQSSVEHSGGQRVRLDLHK----------------LGEFSLFPGQVVGIEGSN 306
L + V+L+SS G R L + SLFPGQ+V +G N
Sbjct: 317 LAETGVVLESSRMMGSGNRTPLVFARGCIVRHTPQDPGTGGGATTLSLFPGQMVLCKGIN 376
Query: 307 PSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTT 366
S++ PLP+ VH + +ALD + +++++AAGPFT+
Sbjct: 377 AGADKFSVSEICFPPPLPLA----VH-TQDEALDHSYAPHKLNG--AALNILVAAGPFTS 429
Query: 367 TDNLYFEPLKELI----------SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEI 416
+L F+P L+ + +R P LIL+GPFV ++HP + T +EI
Sbjct: 430 EHDLDFKPWHALMDQLDAGGIPCAQGRRGVPDTLILMGPFVSADHPAVALSTEMP--EEI 487
Query: 417 FHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFD----IQPPDIIHQITS 471
F R+ + V V +LVPS D N PQP FD +Q ++
Sbjct: 488 FAKHFSTRIGELVGKYA--VSVVLVPSTGDLLNVHSAYPQPGFDKDEAVQWGLPKQRVRC 545
Query: 472 LTNPGTFEANQIKVGCCTVDVLKQLSGEEM----------------SRCSKDGTSNDRME 515
L NP TF N++ VG T D L + EEM + +++ +N R
Sbjct: 546 LPNPSTFYINELVVGATTADSLGDIKAEEMVTRIEASPNITVVPTEAVAARNKETNTRWS 605
Query: 516 IYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALT--ISTIPDIIILPSD--MKYFIK 571
L FYPLYPP L + + L + PD+++LPS K FI+
Sbjct: 606 RAVLSQR------SFYPLYPPPTSARLAYDTSHSHLLNFPAVSPDLLLLPSTKITKPFIR 659
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKG 598
V++ V P LA G
Sbjct: 660 VVA-----------SSTIVQPASLAAG 675
>gi|254568602|ref|XP_002491411.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|238031208|emb|CAY69131.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|328352078|emb|CCA38477.1| DNA polymerase subunit alpha B [Komagataella pastoris CBS 7435]
Length = 640
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 186/439 (42%), Gaps = 71/439 (16%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPT--DPTVASQRTLFAVGMICCDG--- 259
R M + D + L+ +I A L E +P +ASQ +++ G I D
Sbjct: 198 RTMRQKLLDTADVLDEQIDSMAKTLQKHHKIAESDFGNPCIASQFSVYCCGRIVPDSPFA 257
Query: 260 --DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKL 317
+ LN S+ L++S GQR+ +D+ L E+S FPGQ+VG +G NPSG I ++
Sbjct: 258 PVELRLNPDSLFLETSRLGGIGQRISIDVQSLAEYSFFPGQIVGFKGKNPSGERFIVEQV 317
Query: 318 VDQIPL---PVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEP 374
+D IP PV ++ K LD T V+S GP+T + + +
Sbjct: 318 LD-IPYLGAPVSNKTELL-EYKTNLDGSSMKTTVLS-----------GPYTPSTKIDYSL 364
Query: 375 LKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDS----------SFDEIFHLEILR 423
L+ + + +P +I+ GPF+D HP I+ G+ +S + D F I
Sbjct: 365 LESFVQKLNTEIKPHSVIMFGPFLDITHPSIRDGSIESVPELQGKKVATLDNFFRAVITP 424
Query: 424 RLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
L+ + S ++ IL+PS RD+ + PQ F+ + + NP +F+ N+
Sbjct: 425 ILKK----IDSRIQVILIPSTRDSISSHAAYPQNSFERKSLQLPKNFKCFPNPCSFQLNE 480
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAE---- 538
+G +D K + + D DR+ + L +YP +P +
Sbjct: 481 CLIGVSNLDSFKDIKDVNRGKIG-DLNRFDRIADHILQQRR------YYPCFPGSLKTRK 533
Query: 539 ----------GIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCV 588
G LD + +PD++I+PS+M+YF+ K V
Sbjct: 534 GPDGTVEHICGADLDMPYMGLSELYDVLPDVLIIPSEMRYFV-----------RVVKNVV 582
Query: 589 CVNPGRLAKGEGSGTFAEI 607
+NPG G +GT+ +
Sbjct: 583 VINPGYFLTGNNAGTYVTL 601
>gi|406603654|emb|CCH44807.1| hypothetical protein BN7_4376 [Wickerhamomyces ciferrii]
Length = 636
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 71/405 (17%)
Query: 240 DPTVASQRTLFAVGMICCDGDG----HLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
+P++ SQ + VG I D LN S+ L++S G+R+ LDL L ++SLF
Sbjct: 230 NPSIISQSEIITVGRIIPDNPQVESIQLNSSSLALETSRTLGIGKRIPLDLSNLTDYSLF 289
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEI 355
PGQ+V + G N SG ++++ +IP V + + E+ +T + ++
Sbjct: 290 PGQIVALRGKNASGDFFKINEIL-EIPYLGSPV---------STNDEL-TTYYENLENDL 338
Query: 356 SMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTD---- 410
++ GP+T++ +L F L+ ++ + QP ++I+ GPF+D HP + G D
Sbjct: 339 KILCINGPYTSSKDLDFTYLENFVTKVNNEIQPHVVIMFGPFIDISHPLVSSGNLDIESP 398
Query: 411 -----SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPD 464
+ D+IF + L+ + ++++ IL+PS++D+ + PQ +D +
Sbjct: 399 TGKKIQTLDDIFKFLVSPILKK----INNKIQIILIPSLKDSISKHAAYPQDSYDKKQLQ 454
Query: 465 I--IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN-DRMEIYSLDI 521
+ I + NP F+ N+I +G D+ K L +++++ S G + DR+ + +
Sbjct: 455 LSSTKNIKNFPNPSIFQINEILIGVSNNDIFKDL--KDINKGSPAGENRFDRISNHIIQ- 511
Query: 522 SLMGPAFFFYPLYPPA----------------EGIP---LDFSLAQEALTISTIPDIIIL 562
FYP +P + E +P LD + +PDI+I+
Sbjct: 512 -----QRRFYPSFPGSKSQRKITSSNDDEDEFEFLPSSELDVPYLGLSEFNDVLPDILII 566
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
PS++++F +V+ K + +NPG + SGT A+I
Sbjct: 567 PSELRFFARVV-----------KNTLVINPGVFMRPNSSGTLAQI 600
>gi|240275285|gb|EER38799.1| DNA polymerase alpha [Ajellomyces capsulatus H143]
Length = 633
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 171/378 (45%), Gaps = 53/378 (14%)
Query: 245 SQRTLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + AVG I D +G LN S++L++S G R+ L + L FPGQ+V +
Sbjct: 266 STKEIIAVGRIASDSLEGKLNTASLVLETSRRSGAGLRIPLKIDSLPSVQFFPGQIVALR 325
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE-ISMIIAAG 362
G N S +++ + + A+ Q I+ + S E ++++IA+G
Sbjct: 326 GINASREYFTVFEVLS-------TPLLPPAASPPAIIQSINDRLGDSDAERALNILIASG 378
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD-----------S 411
PFT DNL FEPL+ L + A + LIL GPF+D EHP + G D +
Sbjct: 379 PFTADDNLDFEPLRTLCAKAADEYADALILTGPFLDLEHPLVASGDFDLPDEKGLDPDNA 438
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIH--Q 468
+ +F I L+ + S + LVPS+RDA V PQ + D+ Q
Sbjct: 439 TLSSLFQCYITPLLKQLASAVPS-ICIFLVPSVRDAISKHVSFPQEKLLKRDLDLFQTKQ 497
Query: 469 ITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM--SRCSKDGTSNDRMEIYSLDISLMGP 526
+ ++ NP T N+ G C+ DVL +L EE+ R S+ G R+ Y ++
Sbjct: 498 VRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLT-RLSRYLIE------ 550
Query: 527 AFFFYPLYPP---------------AEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
F P++PP A G LD S + + PD++I PS + F+K
Sbjct: 551 QRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPSILPPFVK 610
Query: 572 -----VLSLGGRNEGEEQ 584
+L+LG G++Q
Sbjct: 611 LRASWLLTLGHCQNGKQQ 628
>gi|347971810|ref|XP_313675.5| AGAP004392-PA [Anopheles gambiae str. PEST]
gi|333469039|gb|EAA09104.6| AGAP004392-PA [Anopheles gambiae str. PEST]
Length = 729
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 149/345 (43%), Gaps = 56/345 (16%)
Query: 282 VRLDLHKL---GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQA 338
RLDL K+ +SLFPGQ V +EG NP G +V +H A
Sbjct: 402 TRLDLSKVQVPSWWSLFPGQTVLLEGINPRGTLF--------------SVKQIHCERTLA 447
Query: 339 LDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD 398
L + V S + ++ +IA+ PFT D+L +E L L+ Y P +LIL GPF D
Sbjct: 448 LPR-----VPTSLDKTLTCVIASAPFTDRDDLLYEKLSSLLVYCSNNPPDVLILTGPFAD 502
Query: 399 SEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF 458
+ + +FDE F + + + +G +V D FV P PP+
Sbjct: 503 ANCKLYAE--VAETFDEYFE----KIISTIMSSIGIYTEVFVVSHHDDLVSSFVYPTPPY 556
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC-----SKDGTSNDR 513
+ + L +P F +++G TVDV+K L E + S D+
Sbjct: 557 KVA--SFYKNLHFLPDPCVFNLEGVEIGITTVDVIKHLIESECTVANVTIGSAPPLGGDK 614
Query: 514 MEIYSLDISLMGPAFF---FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFI 570
++ G F FYPL PP E +PLD + E +S +P+I+I PS + ++
Sbjct: 615 IK------RAYGHLFHQASFYPLNPPPEDVPLDVDMLNEFGRLSRVPNIMICPSALNRYV 668
Query: 571 KVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEM 615
+ E CVC+NPG + G++A + +PE+
Sbjct: 669 R-----------EINGCVCINPGFVDGHSADGSYARLIIQ-APEI 701
>gi|347971812|ref|XP_003436801.1| AGAP004392-PB [Anopheles gambiae str. PEST]
gi|333469040|gb|EGK97159.1| AGAP004392-PB [Anopheles gambiae str. PEST]
Length = 616
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 149/345 (43%), Gaps = 56/345 (16%)
Query: 282 VRLDLHKL---GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQA 338
RLDL K+ +SLFPGQ V +EG NP G +V +H A
Sbjct: 289 TRLDLSKVQVPSWWSLFPGQTVLLEGINPRGTLF--------------SVKQIHCERTLA 334
Query: 339 LDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD 398
L + V S + ++ +IA+ PFT D+L +E L L+ Y P +LIL GPF D
Sbjct: 335 LPR-----VPTSLDKTLTCVIASAPFTDRDDLLYEKLSSLLVYCSNNPPDVLILTGPFAD 389
Query: 399 SEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF 458
+ + +FDE F + + + +G +V D FV P PP+
Sbjct: 390 ANCKLYAE--VAETFDEYFE----KIISTIMSSIGIYTEVFVVSHHDDLVSSFVYPTPPY 443
Query: 459 DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC-----SKDGTSNDR 513
+ + L +P F +++G TVDV+K L E + S D+
Sbjct: 444 KVA--SFYKNLHFLPDPCVFNLEGVEIGITTVDVIKHLIESECTVANVTIGSAPPLGGDK 501
Query: 514 MEIYSLDISLMGPAFF---FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFI 570
++ G F FYPL PP E +PLD + E +S +P+I+I PS + ++
Sbjct: 502 IK------RAYGHLFHQASFYPLNPPPEDVPLDVDMLNEFGRLSRVPNIMICPSALNRYV 555
Query: 571 KVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEM 615
+ E CVC+NPG + G++A + +PE+
Sbjct: 556 R-----------EINGCVCINPGFVDGHSADGSYARLIIQ-APEI 588
>gi|157116632|ref|XP_001658585.1| hypothetical protein AaeL_AAEL007692 [Aedes aegypti]
gi|108876368|gb|EAT40593.1| AAEL007692-PA [Aedes aegypti]
Length = 618
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 46/329 (13%)
Query: 280 QRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQAL 339
++++LD K+ +S+FPG+ V +EG NP G+ + +I L + P L
Sbjct: 312 RQMKLDFSKMKTWSVFPGETVVMEGVNPRGNVFEVHNIYYEIDLEL-------PKAPMKL 364
Query: 340 DQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDS 399
E++ M+IA+GP+T D+L +E L +L++Y K P +LIL GPF D
Sbjct: 365 GNEVN------------MVIASGPYTDKDDLLYEKLSDLLTYCKNNCPDVLILTGPFGDI 412
Query: 400 EHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD 459
+P GT +++E F I+ + + + ++V D FV P P+
Sbjct: 413 SNPLF--GTIAETYEEYFEKIII----NIMSSVSPNTEVLIVSHHDDLMSMFVFPSFPYT 466
Query: 460 IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSL 519
I + L +P N +++G T D++K LS E+S K G R Y
Sbjct: 467 ISTS--FPNLRFLPDPCIISINGLEIGITTADIIKDLSEAEVSGDPK-GDKIKRAFNY-- 521
Query: 520 DISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRN 579
M FYPL PP E +PLD L +S +P+++I P D+K +I+
Sbjct: 522 ----MFHHKTFYPLNPPPENLPLDMDLLSTFGKLSRVPNMMICPGDLKCYIR-------- 569
Query: 580 EGEEQKKCVCVNPGRLA-KGEGSGTFAEI 607
+ +CVC+NPGRL+ + G GTFA +
Sbjct: 570 ---DVHRCVCINPGRLSDQTSGEGTFARV 595
>gi|409078958|gb|EKM79320.1| hypothetical protein AGABI1DRAFT_91899 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1199
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 36/327 (11%)
Query: 205 RFMYDRTEDR---------FNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMI 255
R+M+++ +R L+ I A+ + S ++ DP + + VG I
Sbjct: 851 RYMFEKQMERSENCSGFGLLADLDQMIDDAADIVRSHFKLDDIGDPGTTTDEDVVIVGRI 910
Query: 256 CCDGD---GHLNDKSVLLQSSVEHSGGQRVRLDLH----------KLGEFSLFPGQVVGI 302
D D L + S+ L+SS SGG R+ L H FPG +V +
Sbjct: 911 FSDVDVEAEKLTESSLFLESSRMLSGGARIALKFHPALVIRNNIRGARGLGFFPGAIVAL 970
Query: 303 EGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAG 362
+G N G + ++++ +P+P +P+ + + + V S S+I A G
Sbjct: 971 KGRNGGGGYFLVNEVL-TLPIP-------NPTAPVSGENTMKVDPVES--GAFSLIAACG 1020
Query: 363 PFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEIL 422
PFT +L + L L+ AK+ +P L+L+GPFVD+ HP I+ G DS+ E+FH +I
Sbjct: 1021 PFTADSDLSYTFLASLVEAAKKDKPSALLLVGPFVDANHPSIRVGDLDSTPVELFHEKIY 1080
Query: 423 RRLQDYVEYMGSEVRAILVPSIRD--ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEA 480
++ +++ + AIL+P +RD +NH V PQ +I + NP F+
Sbjct: 1081 SSIKSFLDASPGSI-AILLPGVRDLLSNHA-VYPQSELSRDLVKNDPRIHLIPNPSRFKI 1138
Query: 481 NQIKVGCCTVDVLKQLSGEEMSRCSKD 507
N + G C+VDVL L EE + ++
Sbjct: 1139 NDVSFGACSVDVLFHLRKEEFLKLGRE 1165
>gi|66359634|ref|XP_626995.1| DNA dependent DNA polymerase alpha subunit, inactive calcineurin
like phosphatase subunit [Cryptosporidium parvum Iowa
II]
gi|46228445|gb|EAK89315.1| DNA dependent DNA polymerase alpha subunit, inactive calcineurin
like phosphatase subunit [Cryptosporidium parvum Iowa
II]
Length = 621
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 47/343 (13%)
Query: 246 QRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKL-GEFSLFPGQVVGIEG 304
++ + +G I CD +G+LN++SV+L + S G +L L + G+F+L+PGQVV I G
Sbjct: 226 KQAIVTLGAIGCDNEGNLNEQSVILLGTRASSSGNISQLKLGNVNGDFALYPGQVVAILG 285
Query: 305 SNPSG----HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIA 360
+ + +C++A +++ +P P A S+K+ + I + +I
Sbjct: 286 NTETDEFGQNCILAKEIIGGLP-PKPA----ETSLKEL--KNIPEFYAGKGEHPVQCMIF 338
Query: 361 AGPFTT-TDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKG-------TTDSS 412
+GPFTT +NL ++ L E+++YA ++P +LILLGPF+D + IKKG T +
Sbjct: 339 SGPFTTDKENLNYDYLNEILNYANIEKPHVLILLGPFIDVRNESIKKGDLFDFGSNTFIT 398
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF--------DIQPPD 464
F+++F I ++ + +V+ ++PS DA H F +PQP +
Sbjct: 399 FEDLFRRNIYNSIESFAR-KNEKVKIYIIPSEYDAAHPFPIPQPGLKESFFPNTSNESLT 457
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLM 524
I L+NP N IK+ + D++ + ++R +L I ++
Sbjct: 458 FCRNIHFLSNPCELYINDIKISITSSDIVTPIINSCITRSG------------NLPIEVV 505
Query: 525 GPAFFF----YPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
F + YP +P P++ L Q+ +P III P
Sbjct: 506 LSQFLYQRTLYPCFPVQH--PINPKLLQKLALSGELPHIIITP 546
>gi|255729866|ref|XP_002549858.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
gi|240132927|gb|EER32484.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
Length = 670
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 204/447 (45%), Gaps = 89/447 (19%)
Query: 208 YDRTEDRFNALENRIRKHANALVSS-----GLYEEPT--------DPTVASQRTLFAVGM 254
+D T+ +F ++ ++ + A+ L LY+E +P +++Q + G
Sbjct: 202 FDSTKFKFRTMQMKLLESADVLDDQIDRMINLYQEQNKTADLQFGNPCLSTQSDILCCGR 261
Query: 255 ICCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
I D + LN+ S+ L++S GQRV L++ L +S FPGQ+V +G NPSG
Sbjct: 262 IVPDNPMYDKEILNNTSLFLETSRMSGIGQRVPLNIDNLKSYSFFPGQIVVFKGKNPSGK 321
Query: 311 CLIASKLVDQIPLP-VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
I + + LP + A V +++ +E+ + + + ++IA+GPF+ ++
Sbjct: 322 SFIVE---ENMSLPQLGAPVTSSDELREF--EELQKST-----QGLKLLIASGPFSNSNK 371
Query: 370 LYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTD--------SSFDEIFHLE 420
L F+ L+ LI+ K P ++IL GPF+D + I+ G + + D++F L
Sbjct: 372 LNFDKLELLINQINTKILPNVVILNGPFLDLTNKVIESGDIEIEKSQEQPKNLDDVFKLL 431
Query: 421 ILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTF 478
+ L+ + +++ IL P+++D H PQ FD + + NP +F
Sbjct: 432 VTPVLKK----IDPKIQVILYPNLKDTCVKH-CSYPQDAFDRKKLGLPKNFRVFPNPSSF 486
Query: 479 EANQIKVGCCTVDVLKQLSG--EEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP- 535
+ N+I +G +D+ K L +E + + +R+ I+ M +YP +P
Sbjct: 487 QINEILIGNSNLDIFKDLRDVFKEDTEVLSNSNRFERI------INHMFEQRRYYPAFPG 540
Query: 536 ---------------PAEGIPLD------FSLAQEALTIS----TIPDIIILPSDMKYFI 570
AEG LD SL L ++ ++PDI+ILPS++KYF
Sbjct: 541 SIAHQPKTSNTELFNGAEGEHLDGLTVGGSSLETPYLGLTELGDSLPDILILPSELKYFA 600
Query: 571 KVLSLGGRNEGEEQKKCVCVNPGRLAK 597
KV+ + V +NPG K
Sbjct: 601 KVV-----------QGVVVINPGLFIK 616
>gi|67607376|ref|XP_666810.1| DNA polymerase alpha subunit [Cryptosporidium hominis TU502]
gi|54657875|gb|EAL36583.1| DNA polymerase alpha subunit [Cryptosporidium hominis]
Length = 621
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 164/343 (47%), Gaps = 47/343 (13%)
Query: 246 QRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKL-GEFSLFPGQVVGIEG 304
++ + +G I CD +G+LN++SV+L + S G +L L + G+F+L+PGQVV I G
Sbjct: 226 KQAVVTLGAIGCDNEGNLNEQSVILLGTTASSSGNISQLKLGNVNGDFALYPGQVVAILG 285
Query: 305 SNPSG----HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIA 360
+ + +C++A +++ +P P A S+K+ + I + +I
Sbjct: 286 NTETDEFGQNCILAKEIIGGLP-PKPA----ETSLKEL--KNIPEFYAGKGEHPVQCMIF 338
Query: 361 AGPFTT-TDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKG-------TTDSS 412
+GPFTT +NL ++ L E+++YA ++P +LILLGPF+D + IKKG T +
Sbjct: 339 SGPFTTDKENLNYDYLNEILNYANIEKPHVLILLGPFIDVRNESIKKGDLFDFGSNTFIT 398
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPF--------DIQPPD 464
F+++F I ++ + +V+ ++PS DA H +PQP +
Sbjct: 399 FEDLFRRNIYNSIESFAR-KNEKVKIYIIPSEYDAAHKKTIPQPGLKESFFPNTSNESLT 457
Query: 465 IIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLM 524
I L+NP N IK+ + D++ + ++R +L + ++
Sbjct: 458 FCRNIHFLSNPCELYINDIKISITSSDIVTPIINSCITRSG------------NLPLEVV 505
Query: 525 GPAFFF----YPLYPPAEGIPLDFSLAQEALTISTIPDIIILP 563
F + YP +P P++ L Q+ +P III P
Sbjct: 506 LSQFLYQRTLYPCFPVQH--PINPKLLQKLALSGELPHIIITP 546
>gi|68488876|ref|XP_711738.1| hypothetical protein CaO19.2796 [Candida albicans SC5314]
gi|46433060|gb|EAK92516.1| hypothetical protein CaO19.2796 [Candida albicans SC5314]
Length = 664
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 200/451 (44%), Gaps = 97/451 (21%)
Query: 208 YDRTEDRFNALENRIRKHANALVSS-----GLYEEPT--------DPTVASQRTLFAVGM 254
+D ++ +F ++ ++ + A+ L LY++ +P +++Q + G
Sbjct: 197 FDASKFKFRTMQMKLLESADVLDDQIDRMISLYQDQNKTADLQFGNPCMSTQSDILCCGR 256
Query: 255 ICCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
I D + LN S+ L++S GQR+ LDL L +S FPGQ+V ++G NPSG
Sbjct: 257 IVPDNPLYDKEILNSTSLFLETSRISGIGQRIPLDLSNLSNYSFFPGQIVVLKGKNPSGK 316
Query: 311 CLIASKLVDQIPLP-VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
I + +PLP + A V +E+ + + + ++IA+GPF+ ++
Sbjct: 317 SFIVEQ---NMPLPQLGAPV--------TSSEELKEFQTLQNNQGLKVLIASGPFSNSNK 365
Query: 370 LYFEPLKELISYAKRK-QPQLLILLGPF--------------VDSEHPQIKKGTTDSSFD 414
L ++ L +L+ K PQ++IL GPF +DS+ Q + T D F
Sbjct: 366 LNYDKLDKLVDLINTKILPQVVILNGPFLDIGNKVVESGEIIIDSDQSQPQPKTLDDLFK 425
Query: 415 EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSL 472
I +L+++ S+++ IL P++RD H PQ FD + +
Sbjct: 426 AIVT-PVLKKID-------SKIQVILYPNLRDTCIKH-CSYPQDSFDRKKLGLPKNFKVF 476
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
NP F N++ +G +D+ K L ++ + SN+R E + + +YP
Sbjct: 477 PNPSGFSINEVLIGNSNLDIFKDL--RDIYKEDTAIISNNRFERI---VKHIFEQRRYYP 531
Query: 533 LYP----------------PAEGIPLD------FSLAQEALTIS----TIPDIIILPSDM 566
++P A+G LD SL L +S ++PD++ILPS++
Sbjct: 532 IFPGSIKTEPKQKCTDLLNGAQGEYLDGIAVGGSSLETPYLGLSELGDSLPDVLILPSEL 591
Query: 567 KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
KYF KV+ + + +NPG K
Sbjct: 592 KYFAKVI-----------QGVIVINPGIFIK 611
>gi|195146190|ref|XP_002014070.1| GL24481 [Drosophila persimilis]
gi|194103013|gb|EDW25056.1| GL24481 [Drosophila persimilis]
Length = 259
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 131/256 (51%), Gaps = 29/256 (11%)
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSS 412
E+ ++AAGP+T + +L+++PL +L+ Y K +P +L+L+GPFVD++H + + +
Sbjct: 5 RELQFVVAAGPYTHSTDLFYDPLHDLLKYLKDHRPDVLVLVGPFVDADHKLVAEMA--ET 62
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSL 472
FD F + + ++ +G +++ S +DA V P PP ++ + L
Sbjct: 63 FDSFFE----KMVSGIMDVVGGHTTVLMISSQKDAMSHTVYPTPPPALR--KTYPNLHLL 116
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
+P + + I +G + DV+ L E + + +RM + G FYP
Sbjct: 117 PDPSMVDLDGITLGVTSTDVVDHLLSHEFA-----ANAGERMHRAINHLFNQGS---FYP 168
Query: 533 LYPPA-EGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
+YPP E + D LA + + +P++++LP D ++FI+++S C+ +N
Sbjct: 169 IYPPGDEDMSYDTQLALKYAQLRQLPNVLLLPGDQRHFIRLVS-----------DCLVIN 217
Query: 592 PGRLAKGEGSGTFAEI 607
PGRL+ +G GTFA
Sbjct: 218 PGRLSDKKG-GTFARF 232
>gi|68488831|ref|XP_711762.1| hypothetical protein CaO19.10314 [Candida albicans SC5314]
gi|46433085|gb|EAK92540.1| hypothetical protein CaO19.10314 [Candida albicans SC5314]
Length = 664
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 200/451 (44%), Gaps = 97/451 (21%)
Query: 208 YDRTEDRFNALENRIRKHANALVSS-----GLYEEPT--------DPTVASQRTLFAVGM 254
+D ++ +F ++ ++ + A+ L LY++ +P +++Q + G
Sbjct: 197 FDASKFKFRTMQMKLLESADVLDDQIDRMISLYQDQNKTADLQFGNPCMSTQSDILCCGR 256
Query: 255 ICCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
I D + LN S+ L++S GQR+ LDL L +S FPGQ+V ++G NPSG
Sbjct: 257 IVPDNPLYDKEILNSTSLFLETSRISGIGQRIPLDLSNLSNYSFFPGQIVVLKGKNPSGK 316
Query: 311 CLIASKLVDQIPLP-VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
I + +PLP + A V +E+ + + + ++IA+GPF+ ++
Sbjct: 317 SFIVEQ---NMPLPQLGAPV--------TSSEELKEFQTLQNNQGLKVLIASGPFSNSNK 365
Query: 370 LYFEPLKELISYAKRK-QPQLLILLGPF--------------VDSEHPQIKKGTTDSSFD 414
L ++ L +L+ K PQ++IL GPF +DS+ Q + T D F
Sbjct: 366 LNYDKLDKLVDLINTKILPQVVILNGPFLDIGNKVVESGEIIIDSDQSQPQPKTLDDLFK 425
Query: 415 EIFHLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSL 472
I +L+++ S+++ IL P++RD H PQ FD + +
Sbjct: 426 AIVT-PVLKKID-------SKIQVILYPNLRDTCIKH-CSYPQDSFDRKKLGLPKNFKVF 476
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
NP F N++ +G +D+ K L ++ + SN+R E + + +YP
Sbjct: 477 PNPSGFSINEVLIGNSNLDIFKDL--RDIYKEDTAIISNNRFERI---VKHIFEQRRYYP 531
Query: 533 LYP----------------PAEGIPLD------FSLAQEALTIS----TIPDIIILPSDM 566
++P A+G LD SL L +S ++PD++ILPS++
Sbjct: 532 IFPGSIKTEPKQKCTDLLNGAQGEYLDGIAVGGSSLETPYLGLSELGDSLPDVLILPSEL 591
Query: 567 KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
KYF KV+ + + +NPG K
Sbjct: 592 KYFAKVI-----------QGVIVINPGIFIK 611
>gi|241949265|ref|XP_002417355.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
gi|223640693|emb|CAX45004.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
Length = 660
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 200/444 (45%), Gaps = 85/444 (19%)
Query: 208 YDRTEDRFNALENRIRKHANALVSS-----GLYEEPT--------DPTVASQRTLFAVGM 254
+D ++ +F ++ ++ + A+ L LY++ +P +++Q + G
Sbjct: 195 FDASKFKFRTMQMKLLESADVLDDQIDRMISLYQDQNKTADLQFGNPCMSTQSDILCCGR 254
Query: 255 ICCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
I D + LN S+ L++S GQRV LD+ L +S FPGQ+V ++G NPSG
Sbjct: 255 IVPDNPLYDKEILNSTSLFLETSRISGIGQRVPLDISNLPTYSFFPGQIVVLKGKNPSGK 314
Query: 311 CLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNL 370
I + +PLP + + A +E+ + + + ++IA+GPF+ ++ L
Sbjct: 315 SFIVEQ---NMPLP-----QLGAPVTSA--EELKEFQTLQNNQGLKVLIASGPFSNSNKL 364
Query: 371 YFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG--------TTDSSFDEIFHLEI 421
++ L +L+ K PQ++IL GPF+D + ++ G T + D++F +
Sbjct: 365 NYDKLDQLVDLINTKILPQVVILNGPFLDIGNKVVESGDIVIDSEQTQPKTLDDLFKAIV 424
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFE 479
L+ + ++++ IL P++RD H PQ FD + + NP F
Sbjct: 425 TPVLKK----IDAKIQVILYPNLRDTCIKH-CSYPQDSFDRKKLGLPKNFKVFPNPSGFS 479
Query: 480 ANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP---- 535
N++ +G +D+ K L ++ + SN+R E + + +YP +P
Sbjct: 480 VNEVLIGNSNLDIFKDL--RDVFKEDTAIISNNRFERI---VKHILEQRRYYPTFPGSIK 534
Query: 536 ------------PAEGIPLD------FSLAQEALTIS----TIPDIIILPSDMKYFIKVL 573
A+G LD SL L ++ ++PDI+ILPS++KYF KV+
Sbjct: 535 TEPKQNCIDLLNGAQGEYLDDIAVGGSSLETPYLGLAELGDSLPDILILPSELKYFAKVI 594
Query: 574 SLGGRNEGEEQKKCVCVNPGRLAK 597
+ + +NPG K
Sbjct: 595 -----------QGVIVINPGIFIK 607
>gi|403376518|gb|EJY88238.1| Polymerase (DNA directed), alpha 2 [Oxytricha trifallax]
Length = 611
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 51/328 (15%)
Query: 275 EHSGGQRVRLDLHKLGEFSLFPGQVVGIEGS-NP-SGHCLIASKLVDQIPLPVDAVVDVH 332
+ G +++L+L ++ +SLF G+V+ EG +P + ++L PL + +++
Sbjct: 270 QQFGVYKLKLNLSEVKSYSLFEGEVIVAEGFIDPNTAQKFNVTRLHKPAPLQQKSGMNLE 329
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
+ + + R + + ++IA GP+T T NL + L + + ++ QP +I+
Sbjct: 330 EVKQISYNN--------YRDKPLGLMIAKGPYTFTKNLSYSGLYDFLGAVRKNQPHAVIM 381
Query: 393 LGPFVDSEHPQI---------KKGTTDSSFDEIFHLEILRRLQDYVEYM-----GSEVRA 438
+GPFVD + I + G +S++EIF QD VE + G +
Sbjct: 382 MGPFVDYNNSDINDGCLFYDGEGGKVFASYEEIF--------QDLVETIAKQTAGMNTKV 433
Query: 439 ILVPSIRDANHDFVLPQPPFDIQP-PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
I VPS D +H LPQ PF + + Q + NP TF N +K+G D++K +
Sbjct: 434 IFVPSHLDIHHLETLPQQPFHQRYFKSMFTQAVVVGNPSTFRLNDLKIGVINADMIKDM- 492
Query: 498 GEEMSRCSKDGTSNDRMEIYSLDISLMG--PAFFFYPLYPPAEG------IPLDFS-LAQ 548
CS G + M+ +D+SL G YP+YPP+ +P++FS + +
Sbjct: 493 ------CS--GLLSKNMDPPKIDLSLRGILEQRIMYPVYPPSSSAAMLDLVPIEFSQIDK 544
Query: 549 EALTISTIPDIIILPSDMKYFIKVLSLG 576
L IPDI+I PSD+ F KVL
Sbjct: 545 LMLHDDFIPDILITPSDLIPFTKVLKFS 572
>gi|344304974|gb|EGW35206.1| DNA polymerase alpha-primase complex B subunit [Spathaspora
passalidarum NRRL Y-27907]
Length = 592
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 207/474 (43%), Gaps = 97/474 (20%)
Query: 208 YDRTEDRFNALENRIRKHANAL-----VSSGLYEEPT--------DPTVASQRTLFAVGM 254
+D ++ +F ++ ++ + A+ L G+Y++ +P ++SQ + G
Sbjct: 127 FDGSKYKFRTMQMKLLEGADVLDDQIDTMMGIYQDANKSSDTQFGNPCLSSQFEILCCGR 186
Query: 255 ICCDG------DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
I D + LN S+ L++S GQRV LDL KL +S F GQ+V ++G NPS
Sbjct: 187 IVPDSPLYDKENVALNSTSLYLETSRVQGIGQRVPLDLSKLSSYSFFSGQIVILKGRNPS 246
Query: 309 GHCLIASKLVD--QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTT 366
G I ++++ Q+ +P+ + EI + + + +++A+GPF+
Sbjct: 247 GRTFIVDEVLELPQLGVPLSS------------SDEIKEIQELQGKQGLKVLVASGPFSN 294
Query: 367 TDNLYFEPLKELISYAKRKQ-PQLLILLGPFVDSEHPQIKKGTTD--------SSFDEIF 417
+ L ++ L L+ K P ++IL GPF+D + +++G D + DE+F
Sbjct: 295 SQTLNYDRLNNLVELINTKIFPNVVILNGPFLDITNKSVEEGEFDIANDKQQPRNLDEVF 354
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDIIHQITSLTNPG 476
I L+ + ++ +L PS++D PQ FD + + I NP
Sbjct: 355 KFIITPILKK----IDQRIQVVLYPSVKDTCIKHCSYPQDIFDRKKFGLPKNIKVFPNPS 410
Query: 477 TFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM-EIYSLDISLMGPAFFFYPLYP 535
+F N++ +G +DV + L +KD +N + + +S + +YPL+P
Sbjct: 411 SFSINEVLIGNSNLDVFRDLRD-----VTKDNGTNSVLNNRFERIVSHLIDQRRYYPLFP 465
Query: 536 --------PAEGIPLDFSLAQEALTISTI-------------------PDIIILPSDMKY 568
A+ L + E L+ + I PDI++LPS++KY
Sbjct: 466 GAIKSQPGSADMTKLLGGASGEYLSQTGIGGSCLEVPYLGLTEIGDVLPDILVLPSELKY 525
Query: 569 FIKVLSLGGRNEGEEQKKCVCVNPGRLAK-----GEGSGTFAEIYYHGSPEMMN 617
F K++ K + +NPG + + G++A ++ PE N
Sbjct: 526 FAKLV-----------KGVLVINPGLFIRPNRDPSKQEGSYAVVHIQ-PPESSN 567
>gi|238878822|gb|EEQ42460.1| hypothetical protein CAWG_00671 [Candida albicans WO-1]
Length = 664
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 202/443 (45%), Gaps = 81/443 (18%)
Query: 208 YDRTEDRFNALENRIRKHANALVSS-----GLYEEPT--------DPTVASQRTLFAVGM 254
+D ++ +F ++ ++ + A+ L LY++ +P +++Q + G
Sbjct: 197 FDASKFKFRTMQMKLLESADVLDDQIDRMISLYQDQNKTADLQFGNPCMSTQSDILCCGR 256
Query: 255 ICCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
I D + LN S+ L++S GQR+ LDL L +S FPGQ+V ++G NPSG
Sbjct: 257 IVPDNPLYDKEILNSTSLFLETSRISGIGQRIPLDLSNLSNYSFFPGQIVVLKGKNPSGK 316
Query: 311 CLIASKLVDQIPLP-VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
I + +PLP + A V +E+ + + + ++IA+GPF+ ++
Sbjct: 317 SFIVEQ---NMPLPQLGAPV--------TSSEELKEFQTLQNNQGLKVLIASGPFSNSNK 365
Query: 370 LYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGT----TDSSFDEIFHLEILRR 424
L ++ L +L+ K PQ++IL GPF+D + ++ G +D S + L L +
Sbjct: 366 LNYDKLDKLVDLINTKILPQVVILNGPFLDIGNKVVESGEIIIDSDQSQPQPKTLGDLFK 425
Query: 425 --LQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEA 480
+ ++ + S+++ IL P++RD H PQ FD + + NP F
Sbjct: 426 AIVTPVLKKIDSKIQVILYPNLRDTCIKH-CSYPQDSFDRKKLGLPKNFKVFPNPSGFSI 484
Query: 481 NQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP----- 535
N++ +G +D+ K L ++ + SN+R E + + +YP++P
Sbjct: 485 NEVLIGNSNLDIFKDL--RDIYKEDTAIISNNRFERI---VKHIFEQRRYYPIFPGSIKT 539
Query: 536 -----------PAEGIPLD------FSLAQEALTIS----TIPDIIILPSDMKYFIKVLS 574
A+G LD SL L +S ++PD++ILPS++KYF KV+
Sbjct: 540 EPKQKCTELLNGAQGEYLDGIAVGGSSLETPYLGLSELGDSLPDVLILPSELKYFAKVI- 598
Query: 575 LGGRNEGEEQKKCVCVNPGRLAK 597
+ + +NPG K
Sbjct: 599 ----------QGVIVINPGIFIK 611
>gi|403172302|ref|XP_003331441.2| hypothetical protein PGTG_12763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169793|gb|EFP87022.2| hypothetical protein PGTG_12763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 322
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 124/275 (45%), Gaps = 30/275 (10%)
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFD 414
IS+++A GPFT ++L F P + I QP +ILLGPF+D+ H IK G
Sbjct: 25 ISLVVACGPFTWDNDLDFVPFEAFIDQLILDQPDCVILLGPFIDTNHTLIKTGNITQMPS 84
Query: 415 EIFHLEILRRLQDYVEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQPPDI---IHQIT 470
IF +I RL V IL+PS RD V PQ +I+ P++ I
Sbjct: 85 TIFREKISSRLHKLVAS-SPRTHVILIPSPRDLLASQVVYPQAALNIKDPELGLFGRNIV 143
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR---------CSKDGTSNDRMEIYSLDI 521
L NP N++ +G VDVL L EE + +++GT + +
Sbjct: 144 CLPNPSIISINEVIIGINNVDVLMPLKKEEFFKQATVVVDEETAQEGTDPNATNVICRAC 203
Query: 522 SLMGPAFFFYPLYPPAEGIPLD-FSLAQEALTI----STIPDIIILPSDMKYFIKVLSLG 576
+ FYPL+P A GI +D +L L + + DI+ILP++ F+K +
Sbjct: 204 RHVMRQRSFYPLFPHAIGIGMDAINLDVTHLDLLKHDTVGADILILPTNFTAFVKSID-- 261
Query: 577 GRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHG 611
V VNP +L K G+GTFA + H
Sbjct: 262 ---------STVVVNPRQLCKSRGTGTFAHLTIHS 287
>gi|448511801|ref|XP_003866617.1| Pol12 protein [Candida orthopsilosis Co 90-125]
gi|380350955|emb|CCG21178.1| Pol12 protein [Candida orthopsilosis Co 90-125]
Length = 645
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 209/463 (45%), Gaps = 93/463 (20%)
Query: 208 YDRTEDRFNALENRIRKHANAL-----VSSGLYEEPT-------DPTVASQRTLFAVGMI 255
+D + +F ++ ++ + A+ L + LY+E +P ++SQ + G I
Sbjct: 181 FDPAKFKFRTMQMKLLESADVLDDQIDSVAQLYQEYNKTEQQFGNPCLSSQFDILCCGRI 240
Query: 256 CCDGDGH----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHC 311
D + LN S+ L++S GQRV L L KL FS FPGQ+V ++G NP+G
Sbjct: 241 VPDSPMYDSETLNSNSLFLETSRLSGIGQRVPLGLSKLAGFSFFPGQIVVLKGRNPTGKQ 300
Query: 312 LIASKLVD--QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDN 369
+ +++ Q+ PV + E+ + + +++A+GP++ ++
Sbjct: 301 FVVEEVMTLPQLGTPVSS------------RSELEEYNQLQDGHGLKIVVASGPYSNSNK 348
Query: 370 LYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTDSS-------FDEIFHLEI 421
L + L+ L+ + QP ++IL GPF+D + +++G + S D++F L I
Sbjct: 349 LQYSKLEGLVEKINNEIQPNVVILNGPFIDLTNKDVEEGRFNFSRDQLPKNLDDVFRLLI 408
Query: 422 LRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFE 479
L+ + S+++ +L PS++D+ NH PQ FD + + I NP +F
Sbjct: 409 TPILRK----VDSKIQVVLFPSLKDSCVNH-CSYPQDSFDRKKFQLPKNIKVFPNPSSFA 463
Query: 480 ANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP---- 535
N++ +G +D+ K L +E+ + + S +R E I + +YP+ P
Sbjct: 464 VNEVLIGSSNLDLFKDL--KEVFK-QDEKLSKNRFERV---IDHIFQQRRYYPVIPGSIA 517
Query: 536 ------------PAEGIPLD-FSLAQEALTI---------STIPDIIILPSDMKYFIKVL 573
A G L+ S+ +L +++PD++ILPS++K F KV+
Sbjct: 518 RTSEHDISHLTNGAAGENLNGVSVGGSSLETPYLGLTELGNSLPDVLILPSELKVFAKVV 577
Query: 574 SLGGRNEGEEQKKCVCVNPGRLAKGEGS-----GTFAEIYYHG 611
+ V +NPG + S GT+A + G
Sbjct: 578 N-----------DVVVINPGSFIRPSRSINSEDGTYAVLSITG 609
>gi|448080138|ref|XP_004194551.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
gi|359375973|emb|CCE86555.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 165/350 (47%), Gaps = 37/350 (10%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG----- 259
R M + + + L+++I A+ + + E +P ++SQ ++ G I D
Sbjct: 231 RTMSMKLLESADVLDDQIDTMASIISENKKDIELNNPCLSSQFDIYCCGRIVPDSPLYDK 290
Query: 260 --DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKL 317
+ LN ++ L++S GQRV L+L +L E+SLFPGQ+V ++G NP+G ++
Sbjct: 291 SSNQTLNASALYLETSRLSGVGQRVPLNLSELEEYSLFPGQIVFLKGRNPTGQEFSVKEI 350
Query: 318 VDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKE 377
+PLP M + ++ I+ + + +I+AAGPF + + F +
Sbjct: 351 ---LPLP-------ELGMPLSNQDDLEHFAEINGHQGLKVILAAGPFCNNNTIDFTKFSQ 400
Query: 378 LISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--------SSFDEIFHLEILRRLQDYV 429
+ P ++IL+GPF+D + ++ G D D++F I +
Sbjct: 401 FVDKINSLNPHIVILVGPFIDITNSLVRSGDIDLQNEKKQVKDLDDLFKATI----SPII 456
Query: 430 EYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGC 487
+ S++ I++PS++DA H PQ FD + + NP +F AN+I GC
Sbjct: 457 RKINSKISVIMIPSLKDAVIKH-CSYPQDKFDRKKFGLPKNAKVFPNPSSFSANEILFGC 515
Query: 488 CTVDVLKQLSG-EEMSRCS-KDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
+DV K L ++S+ + K S++R + I+ + +YP++P
Sbjct: 516 SNLDVFKDLRDVHKLSKTTEKPKFSSNRFDRI---INHIFEQRRYYPMFP 562
>gi|448084616|ref|XP_004195650.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
gi|359377072|emb|CCE85455.1| Piso0_005051 [Millerozyma farinosa CBS 7064]
Length = 699
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 37/350 (10%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDG----- 259
R M + + + L+++I A+ + S E ++P ++SQ ++ G I D
Sbjct: 231 RTMSMKLLESADVLDDQIDSMASIIQESKHDIELSNPCLSSQFDIYCCGRIVPDSPLYDK 290
Query: 260 --DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKL 317
+ LN ++ L++S GQRV L+L +L E+SLFPGQ+V ++G NP+G ++
Sbjct: 291 SSNQTLNASALYLETSRLSGVGQRVPLNLSELEEYSLFPGQIVFLKGRNPTGQEFSVKEI 350
Query: 318 VDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKE 377
+PLP M + ++ I+ + + +I+AAGPF + + F +
Sbjct: 351 ---LPLP-------ELGMPLSNQDDLDHFAEINGHQGMKVILAAGPFCNNNTIDFTKFSQ 400
Query: 378 LISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD--------SSFDEIFHLEILRRLQDYV 429
+ P ++IL+GPF+D + ++ G D D++F I +
Sbjct: 401 FVDKINSLNPHIVILVGPFIDITNNLVRSGDIDLQNEKKQVRDLDDLFRATI----SPII 456
Query: 430 EYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGC 487
+ S++ I++PS++DA H PQ FD + + NP +F AN+I GC
Sbjct: 457 RKINSKISVIMIPSLKDAVIKH-CSYPQDKFDRKKFGLPKNAKVFPNPSSFSANEILFGC 515
Query: 488 CTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLD--ISLMGPAFFFYPLYP 535
+D+ K L ++ + SK+ T + D I+ + +YP++P
Sbjct: 516 SNLDIFKDL--RDVHKLSKN-TEKPKFSSNRFDRIINHVFEQKRYYPMFP 562
>gi|149247859|ref|XP_001528317.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448271|gb|EDK42659.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 673
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 198/460 (43%), Gaps = 101/460 (21%)
Query: 208 YDRTEDRFNALENRIRKHANAL-----VSSGLYEE--PT------DPTVASQRTLFAVGM 254
+D T+ +F L+ ++ + A+ L + +Y++ P+ +P V SQ + G
Sbjct: 190 FDPTKYKFRTLQMKLLESADMLDDQIDTMAEVYQKQHPSSETQFGNPCVCSQFDILCCGR 249
Query: 255 ICCDGDGH-----LNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSG 309
I D + +N S+ L++S GQRV LDL L +SLFPGQ+V ++G NP+G
Sbjct: 250 IVPDSPSYNDKEIMNSSSLFLETSRITGVGQRVALDLTPLSGYSLFPGQIVVLKGKNPTG 309
Query: 310 HCLIASKLVDQIPLPVDAVVDVHPSMKQALD--QEIHSTVVISRPEEISMIIAAGPFTTT 367
+ +++V + P + + +E+ I + + M+IA+GP++
Sbjct: 310 KVFLVNEVV------------LLPQLGNTVSTREELVEFNEIQKSLGLKMVIASGPYSNL 357
Query: 368 DNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG---------TTDSSFDEIF 417
+ L + ++ + +P ++IL GPF+D + +++G + +E+F
Sbjct: 358 NKLDYSKFEKFVDKMNNDIRPNVIILNGPFLDLTNKAVEEGDFSDGLLKDLQPRNLEEVF 417
Query: 418 HLEILRRLQDYVEYMGSEVRAILVPSIRDA--NHDFVLPQPPFDIQPPDIIHQITSLTNP 475
L + L+ + E + IL+PS+RD+ +H PQ FD + + I NP
Sbjct: 418 SLLVTPILKK----INPETQVILIPSLRDSCVSH-CSYPQDAFDRKKLQLPKHIKVFPNP 472
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
+F N+I VG +DV K L S++R E I+ + +YP+ P
Sbjct: 473 SSFAVNEILVGSSNLDVFKDLRDVYKETKENVDISSNRFERI---INHIFDQKRYYPVMP 529
Query: 536 ----------PAE----------------------------GIPLDFSLAQEALTISTIP 557
PA+ G L+ A ++P
Sbjct: 530 GSIASTQSPAPAQTQAPNKAQSLSELSNGAPGEHLQNIGVGGSSLEVPYLGLAEIGDSLP 589
Query: 558 DIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
D+++LPS++K F K++ K V +NPG+ +
Sbjct: 590 DVMLLPSELKVFAKIV-----------KGVVVINPGQFIR 618
>gi|336382478|gb|EGO23628.1| hypothetical protein SERLADRAFT_356508 [Serpula lacrymans var.
lacrymans S7.9]
Length = 363
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 157/379 (41%), Gaps = 89/379 (23%)
Query: 279 GQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQA 338
G ++R +G LFPG ++ G N G C + + +
Sbjct: 13 GTKIRGGPKGVGGMGLFPGAIIAARGKNGGGGCFVVEE------------------LLTL 54
Query: 339 LDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD 398
+ + + +SM IA GPFT +L ++P +LI K +P +++L+GPF+D
Sbjct: 55 PRLKPPPLPLGNADSSLSMCIACGPFTPDTDLEYQPFHQLIHTLKSTKPAIVLLIGPFID 114
Query: 399 SEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDF-VLPQPP 457
S HP I+ G D + E+F IL L D+++ G+ ++VPSIRD D V PQ
Sbjct: 115 SAHPYIRDGEVDRTPKEMFQTLIL-NLHDFLKISGTS-NVLMVPSIRDIISDHNVFPQSE 172
Query: 458 FD--------IQPPDIIH------------QITSLTNPGTFEANQIKVGCCTVDVLKQLS 497
D I P+ + +I L+NP F N I +VDVL L
Sbjct: 173 LDEKLKNLENIDNPEKLEIFENPGNRKNHPRIHFLSNPCRFSLNGISFAVSSVDVLFHLR 232
Query: 498 GEEMSR--------CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS---- 545
E+ + S ++ND M I FYP++P +PLD +
Sbjct: 233 KNELFKRGAEVDPQSSSVLSANDPMSNLCRHILQQRS---FYPIFP----VPLDLTDEVN 285
Query: 546 ---LAQEALTI-----STIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK 597
E L + PD++I+PS +K+F KV+ V +NP L+K
Sbjct: 286 LDVSHSEGLKLVDGPDPVAPDVLIVPSRLKHFSKVVD-----------DTVSINPSFLSK 334
Query: 598 G----------EGSGTFAE 606
G + SG+F E
Sbjct: 335 GTYATVSLDDSKTSGSFVE 353
>gi|260822499|ref|XP_002606639.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
gi|229291983|gb|EEN62649.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
Length = 521
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 192/452 (42%), Gaps = 89/452 (19%)
Query: 2 EEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDD 61
EE++ EF DE +V+ K C+ Y L SD+ W + ++ + +++ D
Sbjct: 8 EEDLAQEFGTFDIKIQDE-DVVDKLKELCMLYRLDASDMADEWMAFSISN--NSASLTMD 64
Query: 62 EMDGFMLHLQNEQKEA-------IIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTP-- 112
+++ F + A + +E+P+ ++ D+ I D ++++ D+ TP
Sbjct: 65 KLEQFEREASTTCRRANKTKTPKVKREKPAAVMH---DISNINPDAEDDLL-DVYSTPAA 120
Query: 113 ----------PDNLKLYSDALDSTYKANANGYSSDKPSKL-VTPFGRRTEK-----LVVK 156
P+N+ + + L S ++ +S S + TP + + +V
Sbjct: 121 KGKNKRMLTTPENVSVVNKKLTSVSRSPVVPFSPGSFSPVNATPSQQYRSRSGAGETMVT 180
Query: 157 FNINNLPNTENGC-----IEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRT 211
F G ++D +N + K M+ R
Sbjct: 181 FGEQRAKWKGQGAEGVAIQQYDRDNALTEKYKH----------------------MFYRV 218
Query: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD-GDGHLNDKSVLL 270
D+ N L + I ++ L S E Q + G +CCD G LN SVLL
Sbjct: 219 IDKSNVLNDLIEDMSSQLQQSHNMENLQHLAWPCQEPITVSGRVCCDMSTGRLNAHSVLL 278
Query: 271 QSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVD 330
+ S E S + V LDL ++ E+SLFPGQ+V +G N +G L+ SK + LP A VD
Sbjct: 279 EGSRETSARKTVHLDLSEVSEYSLFPGQIVACDGLNTTGSKLVVSKFYQGVHLPF-AEVD 337
Query: 331 VHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLL 390
++ +S P + +++AAGPFT +D+L +EPL++L+ Y KR QP +
Sbjct: 338 -------------ETSENLSVP--VQVLVAAGPFTPSDSLAYEPLEDLLKYLKRDQPDVC 382
Query: 391 ILLGPFVDSEHPQIKKGTTDSSFDEIFHLEIL 422
+L K T + +D++F +L
Sbjct: 383 VL-------------KCTVEVPYDDMFKKIVL 401
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 11/84 (13%)
Query: 530 FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVC 589
+YPLYPP+E + +D+ ++ + PD++I+PSD++YF+K + LG CVC
Sbjct: 428 YYPLYPPSEDVNIDYEHYEQFCRLQATPDVLIIPSDLRYFVKDV-LG----------CVC 476
Query: 590 VNPGRLAKGEGSGTFAEIYYHGSP 613
VNPGR+ K + GTFA P
Sbjct: 477 VNPGRITKAQTGGTFARFVIQCPP 500
>gi|254200|gb|AAB22992.1| DNA polymerase alpha primase 73 kda subunit [Drosophila
melanogaster, Peptide, 653 aa]
Length = 653
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 151/645 (23%), Positives = 254/645 (39%), Gaps = 98/645 (15%)
Query: 1 MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLK-PSDLVSSWEVYYLNRQLDESTVK 59
MEEE+K +F + G D VL +C I YN+ ++ V W + L+ E
Sbjct: 45 MEEELKQQFDEMGVEPADA--VLGRCAELAITYNIHDATEFVEQWMAFSLSHLQGEDPAI 102
Query: 60 DD--EMDGFMLHLQNEQKEA-------------IIKEEPSLHIYSSKDVDMILNDEDENI 104
++ + + +L L+ +++ +++ SL Y + D +L+D
Sbjct: 103 ENLGDFERKVLQLRRTRRDTRQLARRRNHMSSPSVQDTSSLATYGVMEDDPMLDDYVSES 162
Query: 105 AEDILGTPPDNLKLYSDALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFN-INNLP 163
A D K SD AN G + P+ +R L N + P
Sbjct: 163 AVDSSALHTPKAKKQSD-----RTANLKGAALFSPASYTPQSAKRKAGLETPSNSVAGKP 217
Query: 164 NTENGCIEHDD----ENTEDDIIKRIKTGKKCSLMVHGSGPE--PGCRFMYDRTEDRFNA 217
H + + + + +K ++H P +M D DR +
Sbjct: 218 GDIVDTFGHPKLLAGSSWQSQMEHTVPVTQK---LLHNDAPLTIANLGYMNDLLTDRCHN 274
Query: 218 LENRIRKHANALVSSGLYEE--------PTDPTV-ASQRTLFAVGMICCDGDGHLNDKSV 268
L R + ALV L + P D V S L AVGMI + DG L+ S
Sbjct: 275 LRVRFNQTGPALVDKKLGQAGAAECIWYPQDRQVLQSAGGLHAVGMIHSEDDGPLDAHSA 334
Query: 269 ---LLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPV 325
+L VE + L+ ++ S+FPGQVV +G P G + ++ + L
Sbjct: 335 FMAVLDDDVEDEMDPTLTLNFSRVKSASIFPGQVVLAKGFIPRGKTFMVEEIHTERKLT- 393
Query: 326 DAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRK 385
P+ +D+E+ VV P I + TT + + +L + R
Sbjct: 394 -------PATPLQIDRELQ-FVVAPDPLRTVRISSTNRCTTCSST--SRITDLTCWCSRD 443
Query: 386 QPQLLI--LLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPS 443
+ I L+G ++ FD F + + +E +GS ++V S
Sbjct: 444 HSWMPITRLVGELAET-------------FDTFFE----KMIGGIMESIGSHTAVLVVTS 486
Query: 444 IRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+DA V P PP ++ + L +P + + +G + DV+ L E +
Sbjct: 487 QKDAMALSVYPTPPPALR--RTYPNLYMLPDPSLVDLDGFTLGVTSTDVVDHLLSHEFAV 544
Query: 504 CSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPA-EGIPLDFSLAQEALTISTIPDIIIL 562
+ +RM + + G FYPLYPPA E + D LA + + +P+++IL
Sbjct: 545 -----NAGERMHRATNHLFHQGS---FYPLYPPADEDMAYDSQLALKYAQLKQLPNVLIL 596
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
PSD ++FI++++ C+ +NPGR+A +G GTFA
Sbjct: 597 PSDQRHFIRLVN-----------DCLVINPGRVADKKG-GTFARF 629
>gi|388853594|emb|CCF52766.1| related to DNA polymerase alpha 70 kDa subunit [Ustilago hordei]
Length = 735
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 194/483 (40%), Gaps = 114/483 (23%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSS---GLYEEPTDPTVASQRTLFAVGMIC----- 256
R+M+++ +R L++RI + A+ L ++ EE DP++ SQ ++ VG IC
Sbjct: 239 RYMFEKKGERSQVLDDRIDEFASLLRTAYNIDESEEFGDPSLPSQEPIWVVGRICPALPA 298
Query: 257 --------------------------CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHK-- 288
G L + V+L+SS G R+ L +K
Sbjct: 299 SESSAGQTLRSKAAARSKTEVEGKNAAFGLPKLAETGVVLESSRMMGSGNRIPLTFNKGC 358
Query: 289 --------------LGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPS 334
SLFPGQ+V G N S++ PLP+ VH +
Sbjct: 359 IVKYTPQDPGTGGGATTLSLFPGQIVMCRGINAGAEKFAVSEIHFPPPLPLA----VH-T 413
Query: 335 MKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI-------------SY 381
+ +A D +S V ++ + ++++ AAGPFT + L FE L+ S
Sbjct: 414 VDEARDHS-YSPVKLNA-KALNIVAAAGPFTGEEGLEFEGWHRLMDELEAGGLPFPDGSQ 471
Query: 382 AKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDY-VEYMGSEVRAIL 440
+R P LIL GPF+ S HP++ +D E+F RL +Y + V +L
Sbjct: 472 ERRGVPDTLILTGPFISSSHPRLP--FSDELPGELFARHFSSRLITLTTKYPATMV--VL 527
Query: 441 VPSIRDA-NHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQL 496
+PS D N PQP F D + ++ L NP F N++ +G T D L L
Sbjct: 528 IPSTDDILNLHSAYPQPSFSKEDTSQWGLPKRVRCLPNPSVFYVNELVLGTTTADSLGDL 587
Query: 497 SGEE-MSRCSKDGTSNDRMEI----------------YSLDISLMGPAFFFYPLYPPAEG 539
EE ++R N + I YS I FYPL+PP
Sbjct: 588 KSEEFVTRIESSPHRNPNLPIAVAEAVAGKNKEPNTRYSRSIISQ---RSFYPLFPPPTS 644
Query: 540 IPLDFSLAQEALT--ISTIPDIIILPSD--MKYFIKVLSLGGRNEGEEQKKCVCVNPGRL 595
L + + L + PD++ILPS K FI+V++ + PG +
Sbjct: 645 SNLAYDTSHSHLLNFPAVTPDLLILPSGKITKPFIRVVN-----------SATVIQPGSV 693
Query: 596 AKG 598
AKG
Sbjct: 694 AKG 696
>gi|328871924|gb|EGG20294.1| hypothetical protein DFA_07417 [Dictyostelium fasciculatum]
Length = 645
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 173/411 (42%), Gaps = 63/411 (15%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
++M E R AL + + K+ + DP+ QR AVG I G
Sbjct: 270 KYMSQTLEGRTKALGDSVLKYYDQFQVEFDPVANADPSNEIQR---AVGRIWLYKTG--- 323
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFS--LFPGQVVGIEGSNPSGHCLIASKLVDQIP 322
+ L S + G + ++ + + +F GQVV +EG G SK+
Sbjct: 324 ---LSLTSQFKLLGNNQSSVNTFSIPNPNEPIFSGQVVMVEGKRIPGQHFGCSKIY---- 376
Query: 323 LPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYA 382
+P + L+ S + +I+A+GPF+ +N + P KEL
Sbjct: 377 ---------YPKQLEFLNSNQRS----KKDSSCYIIVASGPFSEYENTLYHPFKELCKVI 423
Query: 383 KRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVP 442
+ K+P ++IL GPF+D + D SF+E F+ +I++ L+ + + I+ P
Sbjct: 424 ENKRPNIVILNGPFIDESNQ--NNQFLDKSFEEFFYEDIIQPLESI-----TSTQFIICP 476
Query: 443 SIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEA-NQIKVGCCTVDVLKQLSGEEM 501
S+RD HD+V PQPPF + + I +TNP T N +G ++++QL
Sbjct: 477 SLRDVQHDYVYPQPPFKSRSKNTSSNIHFVTNPSTLLIDNSFTIGLSNTNIIQQL----- 531
Query: 502 SRCSKDGTSNDRMEIYSLDISLMGPAFF----FYPLYPPAEGIPLDFSLAQEALTISTIP 557
D ND I + L+ +YPL+ PAE +P++ S P
Sbjct: 532 -ELRLDNGKND---IKTTGTPLICEKIIQQQCYYPLH-PAE-VPIETQFIDSIKFPSITP 585
Query: 558 DIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEG-SGTFAEI 607
DI+I K FI NE +C+ G+L G +GT+ E+
Sbjct: 586 DILIFGKVDKPFI-----ANSNE------VLCIGSGQLMNHSGKTGTYTEL 625
>gi|313224814|emb|CBY20606.1| unnamed protein product [Oikopleura dioica]
Length = 527
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 54/361 (14%)
Query: 213 DRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQS 272
+R +ENR+ +V Y TD + GMI C+G +L
Sbjct: 184 ERCEFIENRL-----GIVEQASYSIITDVPIT------VCGMIICEGSKGAEGVYLL--- 229
Query: 273 SVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVH 332
G++V+L++ +L S+FPG + +EG N +G ++ SK+
Sbjct: 230 ----RDGEQVQLEISELEGNSIFPGMICAVEGVNLTGKLIVVSKIY-------------- 271
Query: 333 PSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLIL 392
Q D+ I V E+ +++I +GP+ T+DN EPL+ELI+ P L I
Sbjct: 272 ----QLTDKAIEDEGV---KEDTTVVICSGPYFTSDNTSNEPLEELITQVASLAPHLAIF 324
Query: 393 LGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV 452
+GPF+D H G S + + E+ ++ D + G++VR ++PS D D V
Sbjct: 325 MGPFLDQSH----MGADCISVENLN--ELWKKQIDSLAQSGTKVR--MIPSTADLFADPV 376
Query: 453 LPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSND 512
+P D + + ++NP AN+ + +VD+ L E+ + +
Sbjct: 377 IPTRAIDEKEFAYCRE-HMVSNPCFLAANKWNIAAISVDLPLSLMKTEIVKNPSNSCKFS 435
Query: 513 RMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKV 572
R+ + L M PL+P E I +D+S +E + P+++++ S++ FIK+
Sbjct: 436 RIGEHLLSQQCM------MPLFPAPEEISVDYSKFKENICFEKQPNVLVVRSELNPFIKL 489
Query: 573 L 573
+
Sbjct: 490 V 490
>gi|391339837|ref|XP_003744253.1| PREDICTED: DNA polymerase alpha subunit B-like [Metaseiulus
occidentalis]
Length = 541
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 137/615 (22%), Positives = 244/615 (39%), Gaps = 114/615 (18%)
Query: 3 EEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDE 62
+++ EF G F E + ++CL FC ++L PSD +W + + T +
Sbjct: 6 DDVVQEFSLFGIEFA-EDIIPERCLQFCKKHSLGPSDFCDAWVAWAKGAII---TYNTET 61
Query: 63 MDGFMLHLQNEQKEAIIKEEPSLHIYSSKDV-DMILNDEDENIAEDILGTPPDNLKLYSD 121
++ +L + +++ + H + V IL+ G P L +
Sbjct: 62 LEKMILDFEKQKQSVPPPPKTPSHGAQKRSVTSAILSPALSTPKRQNNGNP-----LCAS 116
Query: 122 ALDSTYKANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGCIEHDDENTEDDI 181
D T A Y S GRRT ++V + + EN ++ D +D+
Sbjct: 117 FTDGTDSTPARVYKS----------GRRTGQVVASYKGRDFAEFENPQVKKIDSRPVNDV 166
Query: 182 IKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIR-KHANALVSSGLYEEPTD 240
+ + K +RTE LE R K + AL L +
Sbjct: 167 EVQGRLQNK------------------NRTEMNLAVLERLGRMKESFALADKDLKD---- 204
Query: 241 PTVASQRTLFAVGMICCDGD---GHLN-----DKSVLLQSSVEHSGGQRVRLDLHKLGEF 292
G DGD G L + LL E S + +F
Sbjct: 205 ----------ISGGFLSDGDIVYGMLRPPKRPNLPFLLYGDYEVSRSSSTPV----FPKF 250
Query: 293 SLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP 352
FPGQV+ + NP+ ++ +D+ P + ++K L
Sbjct: 251 PAFPGQVILAKVGNPANQ----ARFLDESFEPELPPLPSPVNLKSGL------------- 293
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSS 412
+++ AGP+TT D + +EP + I R++P L IL+GPFVD+ H ++ D S
Sbjct: 294 ---RILVVAGPYTTLDTMSYEPYHDFIEQLIREEPDLAILVGPFVDANHKKLST-NLDCS 349
Query: 413 FDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANH--DFVLPQPPFDIQPPDIIHQIT 470
F+E F L+++ L++ + G R +V + R+ NH P + + P D ++T
Sbjct: 350 FEEYF-LQLIAHLEN--KLTGKNTRLYIVANHRE-NHGSSRAFPTERYCL-PAD--SRVT 402
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF 530
L +P + N I++G + D+++ ++ E + ++ +++ + F
Sbjct: 403 CLNDPAILDVNGIQIGVSSTDIIRGMT-ESLVNVEEN------LDVNRFCARALLQQRSF 455
Query: 531 YPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
YPL+PP + L L + P I++LP+ + F E+++ + V
Sbjct: 456 YPLFPPHAELALRLPLLNR-MMFDVRPHILVLPATVAPF-----------AFEEERTMVV 503
Query: 591 NPGRLAKGEGSGTFA 605
NPG L KG +G++A
Sbjct: 504 NPGSLVKGMDAGSYA 518
>gi|150865942|ref|XP_001385361.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
gi|149387198|gb|ABN67332.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
Length = 685
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 195/431 (45%), Gaps = 84/431 (19%)
Query: 240 DPTVASQRTLFAVGMICCDGDGH-------LNDKSVLLQSSVEHSGGQRVRLDLHKLGEF 292
+P ++SQ + G I D + LN S+ L++S + GQR+ LDL +L +
Sbjct: 256 NPCISSQFDINCCGRIVPDSPNYDKTASVQLNSTSLYLETSRINGIGQRIPLDLSQLKGY 315
Query: 293 SLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRP 352
S FPGQ+V + G NP+G +++ +IP AV S +Q L++ T
Sbjct: 316 SFFPGQIVLLRGRNPTGRSFTIKEVL-EIPELGAAV-----SSRQDLEEFEEMTA----E 365
Query: 353 EEISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKGTTD- 410
+ +++AAGPF+ +L + L++L +P +++L GPF+D + + G +
Sbjct: 366 NGLKIMVAAGPFSNHHSLNYSKLEKLTEIINNSMKPHVVVLNGPFIDITNSMVASGDIEI 425
Query: 411 -------SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD-ANHDFVLPQPPFDIQP 462
+ DE+F + + + + S ++ IL+PS+ D A PQ F+ +
Sbjct: 426 PDDKSPPRNLDELFK----KLISPILRKIDSRIQVILIPSVNDTAIKHCSYPQDSFERKK 481
Query: 463 PDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTS-NDRMEIYSLDI 521
+ + + NP + N++ + +DV K L +++ + + +G S ++R E + I
Sbjct: 482 FGLPKNVRIVPNPSSVSVNEVLIANSNLDVFKDL--KDVHQENPEGKSFSNRFERIANHI 539
Query: 522 SLMGPAFFFYPLYP-------------PAE------GIPLDF-SLAQEALTI-------- 553
FYP++P P E G L F S+ +L +
Sbjct: 540 FEQR---RFYPVFPGSIKRVTPFQTATPPELHEGIMGKELSFTSVGGPSLEVPYLGLTEL 596
Query: 554 -STIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAK-----GEGSGTFAEI 607
++PDI+I PSD+K F+KV+S V +NPG K GT+A I
Sbjct: 597 GDSLPDILISPSDLKSFVKVIS-----------GVVVINPGYYIKLNKDPTREDGTYAVI 645
Query: 608 YYHGSPEMMNA 618
+ +P +NA
Sbjct: 646 --NITPPQLNA 654
>gi|440793110|gb|ELR14305.1| DNAdirected DNA polymerase subunit, putative [Acanthamoeba
castellanii str. Neff]
Length = 256
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 27/265 (10%)
Query: 362 GPFTTTDNLYFE--PLKELISYAKRKQPQLLILLGPFVDSEHPQIKK----GTTDSSFDE 415
G T T + ++ L ++ AK +IL GPFVD+ QI + G D+ F+
Sbjct: 3 GRLTATASWSYQSSALPAIVEVAKVHAVHAVILFGPFVDA---QIWESGSLGVPDTPFEV 59
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNP 475
IF +LR L+ + + S +LVPS+RDA+H V PQPP+D + + NP
Sbjct: 60 IFEKNLLRPLRASLSSLHSTPELVLVPSLRDAHHHTVYPQPPYDTS-GGKQRGLHLVANP 118
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
N + +G + DVL ++ +E+ + G + L L+ FYP++P
Sbjct: 119 SLVRINGLALGLTSHDVLADIARQELVK----GDHLEERHPARLAGHLLKQG-SFYPVHP 173
Query: 536 PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRL 595
PA G+PLD S + +PD++++PS + F +V+ EG CVNPG
Sbjct: 174 PAPGVPLD-STQLFKTELPYVPDVLVVPSCLSPFARVV------EG-----AACVNPGFA 221
Query: 596 AKGEGSGTFAEIYYHGSPEMMNASI 620
G GT A + H +P ++
Sbjct: 222 VDGAAYGTAALLTLHRAPVATTTTV 246
>gi|395742479|ref|XP_002821574.2| PREDICTED: DNA polymerase alpha subunit B-like, partial [Pongo
abelii]
Length = 337
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 17/188 (9%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
+ M+ + D L +I + + L E T +Q + +G I CD +G LN
Sbjct: 167 KSMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLN 226
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
+KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L+A+KL + +PLP
Sbjct: 227 NKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLP 286
Query: 325 VDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKR 384
+ +Q++ +++A GP+TT+D++ ++PL +LI+
Sbjct: 287 FYQPTEEDADFEQSM-----------------VLVACGPYTTSDSITYDPLLDLIAVINH 329
Query: 385 KQPQLLIL 392
+P + IL
Sbjct: 330 DRPDVCIL 337
>gi|17554432|ref|NP_499268.1| Protein DIV-1 [Caenorhabditis elegans]
gi|21431778|sp|Q21625.3|DPOA2_CAEEL RecName: Full=DNA polymerase alpha subunit B; AltName:
Full=Division delayed protein 1
gi|18136205|emb|CAA83467.2| Protein DIV-1 [Caenorhabditis elegans]
Length = 581
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 54/410 (13%)
Query: 214 RFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD---GDGHLNDKSVLL 270
R + +RI+K +V G +P++ S ++ G + D + + SV L
Sbjct: 205 RMADIAHRIQKSFEEIVDWG------NPSIPSVDVVYTYGQVIHDETKDNEKFGEHSVAL 258
Query: 271 QSSVEHSGGQRVRLDLHKLGE-FSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
+ G +R+D K+ E +LFPGQ++ + G+N +G L K+ LPV+ V
Sbjct: 259 M--INDEDGTMIRMDFSKMTEDITLFPGQIIAVRGTNETGEELQVDKIFQPAALPVNPV- 315
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
E +T I A GP+T TDN +E L EL+ ++P +
Sbjct: 316 ------------ETDTTKEI--------WFACGPYTATDNCGYEHLCELLDKVVAEKPDI 355
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSI-RDAN 448
L+L GPFVD ++ + K T + ++D + ++L ++++ + +G++ + I+ P+ RD
Sbjct: 356 LMLAGPFVDKKNTFLNKPTFNITYDNLLE-DLLLKVKETL--VGTKTQVIIQPNASRDLC 412
Query: 449 HDFVLPQPPF--DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSK 506
V P PF + + I ++ + +P F + ++V + + ++ LS E R S
Sbjct: 413 VPPVFPSAPFQQNRKLDKIKKELIFVADPCIFRISGVEVAMTSSEPIQALSNTEFHR-SA 471
Query: 507 DGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDM 566
+ + DR+ S S + YPL P +P + I + P I+ P+ +
Sbjct: 472 NQENIDRVARLS---SHLLTQQCMYPLEPTE--VPASMGDLLDVCCIGSTPHIVFAPTKL 526
Query: 567 ---------KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
FI +L G K + +N G L GE +A+I
Sbjct: 527 APSAKCVNGSVFINSSTLAKGPTGNYAKMSINLNAGELMPGETVADYAQI 576
>gi|209876758|ref|XP_002139821.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
gi|209555427|gb|EEA05472.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
Length = 598
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 159/356 (44%), Gaps = 38/356 (10%)
Query: 165 TENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRK 224
T+ C ++ EN D I + C + S E R + R +D +E I +
Sbjct: 143 TDKSCTKYYIENLVDSITE------DCLWL--DSDFEIYSRSISKRCQD---LIEMIISQ 191
Query: 225 HANALVSSGLYEEPTDPTVASQR-TLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVR 283
+N+ + + P P S++ + +G I CD + HLN++S+LL S E SGG
Sbjct: 192 CSNSWLDESGEKYPIIPVGESRKQKVVTLGQIACDNESHLNEQSILLIGSRERSGGHTCE 251
Query: 284 LDL-HKLGEFSLFPGQVVGIEGS---NPSG-HCLIASKLVDQIPL--PVDAVVDVHPSMK 336
L + + + + +L+PGQ+V + G+ N G +C A + + +P P ++ S K
Sbjct: 252 LRIRNTIKDITLYPGQIVAVIGNSEINEFGQYCFTADEFIGGLPPQPPKVTFKELSNSTK 311
Query: 337 QALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF 396
Q H + I+ +GPFT L F L ++ Y +++P +LIL+GPF
Sbjct: 312 LYAAQGQHP---------VQCIVFSGPFTNNKYLDFSYLTRILDYVSKEKPHVLILMGPF 362
Query: 397 VDSEHPQIKKGTTDS-------SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANH 449
+D+ + I + SF+ I+ + L +V+ ++PS D H
Sbjct: 363 LDARNEIINNADLYNHDTGSFLSFESIYR-NLFSNLISQFAKRNEKVKIYIIPSEYDIGH 421
Query: 450 DFVLPQPPFD--IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR 503
+ +PQP + + + + LTNP N K+ + DV+ ++ ++R
Sbjct: 422 SYPIPQPSLEQSLTQLNFPSNMYWLTNPCQIFINDFKIYITSSDVVAPMANSMITR 477
>gi|393909132|gb|EFO26626.2| DNA polymerase alpha subunit B family protein [Loa loa]
Length = 592
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 203/463 (43%), Gaps = 66/463 (14%)
Query: 152 KLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRT 211
K++VKF N + +++D N +++R+ +L+ +G+ ++
Sbjct: 160 KIIVKFTGKNFTAKGSDGVKYD--NVCKVVVERLYADDYKNLLQYGA----------EKD 207
Query: 212 EDRFNALENRIRKHANALV--SSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVL 269
++ AL +R+R + + + L ++ +++ R +++ G I + + L+ +
Sbjct: 208 LEQIEALVSRVRSLCDIIKDENETLADDEQTDSLSFIRNVYS-GFIVNNTEDPLDASNCS 266
Query: 270 LQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
LQ V+ S + LDL L +SLFPG++V G+ +G + D+I P +
Sbjct: 267 LQC-VDQSAAV-INLDLSNLKTYSLFPGKIVAFRGAF-AGDIFVP----DEIFEPKEP-- 317
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
P KQA +H + A GPF+++ L +E L +LI ++++P +
Sbjct: 318 SAAPFNKQAEIDLLH------------VWCACGPFSSSKTLSYEQLCDLIELVRKERPNI 365
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVR--AILVPSIRDA 447
LIL+GPF+D P +K ++D++ + + + + + S+ + A L PS
Sbjct: 366 LILIGPFIDRTSPVVKSPQCCYTYDDVMEMLLTKIGEALLGINSSKWKKDAALRPS---- 421
Query: 448 NHDFVLPQPP---FDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRC 504
P PP F + + I L +P I+ ++++ L +E+
Sbjct: 422 -----FPTPPFRSFKQRKQQLGKNIVLLPDPAIVRIAGIEFAITASEIIQHLGRDEIGHF 476
Query: 505 SKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS 564
DR+ D+ YPLYP AE + A E ++S IP IIILPS
Sbjct: 477 DS-HEDQDRISRLVRDLFRQRS---LYPLYPAAEDVTYRLREAVERTSLSVIPHIIILPS 532
Query: 565 DMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
+ +KV++ V VN L +G SGTF ++
Sbjct: 533 ILAPTVKVVA-----------NSVFVNTNALVRG-SSGTFMKL 563
>gi|343429362|emb|CBQ72935.1| related to DNA polymerase alpha 70 kDa subunit [Sporisorium
reilianum SRZ2]
Length = 732
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 196/499 (39%), Gaps = 114/499 (22%)
Query: 186 KTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYE---EPTDPT 242
KT + SL + R+M+++ +R L++RI A+AL ++ + E DP+
Sbjct: 225 KTTARVSLAMATDPKAWNYRYMFEKKGERSQVLDDRIDACASALRAAYAIDDADELGDPS 284
Query: 243 VASQRTLFAVGMICC------DGDGH---------------------LNDKSVLLQSSVE 275
+ SQ ++ VG IC GH L + V+L+SS
Sbjct: 285 LPSQEPIWVVGRICPALPAPESAAGHALRAKAAARAKGVEDAFGLPKLAETGVVLESSRM 344
Query: 276 HSGGQRVRLDLHK----------------LGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
G R L K SLFPGQ+V G N S++
Sbjct: 345 MGSGNRTPLAFAKGCIVRHTPQDVGTGGAATTLSLFPGQIVLCRGINAGADKFSVSEICF 404
Query: 320 QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI 379
PLP + VH ++ +ALD + + ++++ A+GPFT D+ F L+
Sbjct: 405 PPPLP----LAVH-TVNEALDHAYSPSKLNG--SALNIVAASGPFTADDDFEFARWHRLM 457
Query: 380 -------------SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQ 426
+ +R P LIL GPFV ++HP + + E+F I RL
Sbjct: 458 DALEAGGLPCSDTAAQRRGVPDTLILTGPFVSTQHPLLPFSVEMPA--ELFARHISARLH 515
Query: 427 DYVEYMGSEVRAILVPSIRDA-NHDFVLPQPPFDIQPPDII-------HQITSLTNPGTF 478
+E + +LVPS D N PQP F D + ++ L NP F
Sbjct: 516 ALLEKFPATT-VVLVPSTHDVLNVHSAYPQPAFGKD--DAVGAMGLPRQRVRCLPNPSVF 572
Query: 479 EANQIKVGCCTVDVLKQLSGEEM----------------SRCSKDGTSNDRMEIYSLDIS 522
N++ VG + D L L G+EM S SK+ +N R L
Sbjct: 573 YVNELVVGVTSADALGDLKGDEMVMRIEAASAAAPMGADSVASKNKETNTRWSRALLS-- 630
Query: 523 LMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSD--MKYFIKVLSLGGRNE 580
FYPL+PP +P D S + + PD+++LPS K FI+V+S
Sbjct: 631 ----QHSFYPLFPPPAALPFDTSHSHLLQFPAVTPDLLVLPSAKLAKPFIRVVS------ 680
Query: 581 GEEQKKCVCVNPGRLAKGE 599
V PG +A+G
Sbjct: 681 -----SATVVQPGSVARGS 694
>gi|71014367|ref|XP_758704.1| hypothetical protein UM02557.1 [Ustilago maydis 521]
gi|46098494|gb|EAK83727.1| hypothetical protein UM02557.1 [Ustilago maydis 521]
Length = 764
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 181/465 (38%), Gaps = 113/465 (24%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLY---EEPTDPTVASQRTLFAVGMICC---- 257
R+MY++ +R L+ RI + A+ L S+ EE DP++ASQ ++ VG IC
Sbjct: 264 RYMYEKKGERSQVLDERIDEFASMLRSAYAIDESEEFGDPSLASQEAIWVVGRICAALPA 323
Query: 258 -------------------------DGDG-------HLNDKSVLLQSSVEHSGGQRVRLD 285
D DG L + V+L+SS G R L
Sbjct: 324 PQSSAGEAMRAKAKAKAAASGKTNGDVDGTLAFGLPKLAETGVVLESSRMMGSGNRTPLV 383
Query: 286 LHK----------------LGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
K SLFPGQ+V G N S++ PLP+
Sbjct: 384 FDKGCIVKHTPQDAGTGGAATTLSLFPGQMVLCRGINAGADKFSVSEICLPPPLPLA--- 440
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI---------- 379
VH ++ ALD+ + + ++++ A P+T +L+F L+
Sbjct: 441 -VH-TVDDALDRWYATDKL--NGTALNVVAACAPYTDEADLHFAAWHRLMDALESGGLPS 496
Query: 380 ---SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYV-EYMGSE 435
++R P L+L GPF+ S+H + T + E+F RRL + V Y +
Sbjct: 497 SDSETSRRGVPDTLVLCGPFISSKHAHLAFSTDTPA--ELFIEHFTRRLNELVTRYPATT 554
Query: 436 VRAILVPSIRDA-NHDFVLPQPPF---DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVD 491
V +++PS D N PQP F D + Q+ L NP N++ +G +VD
Sbjct: 555 V--VMIPSTDDILNVHSAYPQPGFSKDDAVSLRLPKQVKCLPNPSVLFVNELVLGVTSVD 612
Query: 492 VLKQLSGEEM--------------------SRCSKDGTSNDRMEIYSLDISLMGPAFFFY 531
VL + EEM S SK+ +N R L FY
Sbjct: 613 VLADIKSEEMVTRIQASPNATASAASAVTQSVASKNKETNTRWSRSLLS------QRSFY 666
Query: 532 PLYPPAEGIPLDFSLAQEALT--ISTIPDIIILPSDMKY-FIKVL 573
PL+PP L + L + PD++ILPS FI+V+
Sbjct: 667 PLFPPPTQSGLSYDTCHSHLLGFPAVTPDLLILPSQKANPFIRVV 711
>gi|402593974|gb|EJW87901.1| DNA polymerase alpha subunit B family protein [Wuchereria
bancrofti]
Length = 598
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 204/456 (44%), Gaps = 50/456 (10%)
Query: 161 NLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMV---HGSGPEPGCRFMYDRTEDRFNA 217
N N+ IE +N I RIK +C ++V + + ++ ++ ++ A
Sbjct: 155 NRKNSGKVVIEFTGKNFSAKINDRIKGSNECKVVVEKLYTDDYKNLLQYGAEKDLEQVEA 214
Query: 218 LENRIRKHANALV--SSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVE 275
L R++ + + + L ++ +++ R +++ G I + L+ + LQ + +
Sbjct: 215 LVIRVQTLCDIIKEENETLVDDEQMDSLSLIRNIYS-GFIVNITEDPLDASNCSLQCTDQ 273
Query: 276 HSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSM 335
++ + LDL L +SLF G++V + G+ V P + PS+
Sbjct: 274 NAAV--INLDLSNLKAYSLFSGKIVSLRGA-----------FVGDNFFPDEIFEPKEPSI 320
Query: 336 KQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGP 395
Q S + + + A GPFT++ L +E L +L+ K+++P +LIL+GP
Sbjct: 321 ASLNKQ--------SDIDLLHVWCACGPFTSSKTLSYEQLCDLMELVKKERPNILILIGP 372
Query: 396 FVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPS-IRDANHDFVLP 454
F+D P +K ++D++ ++ +L ++ + + +G++V+ ++VP+ +DA P
Sbjct: 373 FIDRTSPVVKSPQCCYTYDDLMNM-LLAKIDEVL--LGTDVQVLIVPNGKKDAAIRPSFP 429
Query: 455 QPP---FDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSN 511
PP F + + I L +P I+ ++++ L +E+ S +
Sbjct: 430 TPPFRSFKQRKQQLSKNILFLPDPAIVRIAGIEFAVTASEIIQHLGRDEIGH-SDSCEDH 488
Query: 512 DRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
DR+ D+ YPLYP A I A E ++S IP + ILPS + +K
Sbjct: 489 DRVSRLVRDLFRQRS---LYPLYPAAHDITYRLRQAIERTSLSAIPHVTILPSVLAPTVK 545
Query: 572 VLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
V++ V VN L +G SGTF ++
Sbjct: 546 VVA-----------GSVFVNTNALVRG-SSGTFMKL 569
>gi|308497134|ref|XP_003110754.1| CRE-DIV-1 protein [Caenorhabditis remanei]
gi|308242634|gb|EFO86586.1| CRE-DIV-1 protein [Caenorhabditis remanei]
Length = 581
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 177/423 (41%), Gaps = 57/423 (13%)
Query: 204 CRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD---GD 260
C + D R + I+K + G +P + S ++ G + D +
Sbjct: 192 CSMVIDAKSRRMTDISQHIQKVFEEIADWG------NPLIPSVDVVYTYGQVVHDETKDN 245
Query: 261 GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE-FSLFPGQVVGIEGSNPSGHCLIASKLVD 319
+ SV L + G +RLDL K+ E +LFPGQ++ + G+N +G L K+
Sbjct: 246 EKFGENSVALM--INDEDGTMIRLDLSKITEDVTLFPGQIIAVRGTNETGEELQVDKIFT 303
Query: 320 QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI 379
LPV V E +T I A GP+T DN +E L EL+
Sbjct: 304 PSSLPVSPV-------------ESDTTKDI--------WFACGPYTAMDNCGYEQLCELL 342
Query: 380 SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAI 439
++P +L+L GPFVD ++ + K T + ++D++ ++L ++++ + + + I
Sbjct: 343 DKVVAEKPDILVLAGPFVDQKNAFLNKSTFNITYDDLME-DLLCKIKE--KLINTRTEVI 399
Query: 440 LVPSI-RDANHDFVLPQPPFDIQP---PDIIHQITSLTNPGTFEANQ--IKVGCCTVDVL 493
+ PS RD V P PPF + I +I +++P F Q I+V + + +
Sbjct: 400 IQPSASRDLCTPSVFPSPPFQFKNRKLDSIRKEIHFVSDPCIFRIGQKGIEVAVTSSEPI 459
Query: 494 KQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTI 553
+ LS E R S + + DR+ S M YPL P +P E +
Sbjct: 460 QGLSNSEFHR-SANQENIDRIARL---CSHMLTQQTLYPLEPTE--VPSSMGDLLEVCRL 513
Query: 554 STIPDIIILPSDM---------KYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTF 604
++ P I+ P+ + FI +L G K + ++ G + GE +
Sbjct: 514 TSSPHIVFAPTKLAPSAKSVNGSVFINSSTLAKGPTGNYVKMSINLHAGEIMPGETVADY 573
Query: 605 AEI 607
+ I
Sbjct: 574 SLI 576
>gi|312068913|ref|XP_003137436.1| DNA polymerase alpha subunit B family protein [Loa loa]
Length = 608
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 203/469 (43%), Gaps = 62/469 (13%)
Query: 152 KLVVKFNINNLPNTENGCIEHDDENTEDDIIKRIKTGKKCSLMVHGSGP-----EPGCRF 206
K++VKF N + +++D N +++R+ +L+ +G+ E R
Sbjct: 160 KIIVKFTGKNFTAKGSDGVKYD--NVCKVVVERLYADDYKNLLQYGAEKDLEQIEGEARK 217
Query: 207 MYDR-TEDRFNALENRIRKHANALV--SSGLYEEPTDPTVASQRTLFAVGMICCDGDGHL 263
+D + L +R+R + + + L ++ +++ R +++ G I + + L
Sbjct: 218 FFDHFIMWDYLPLVSRVRSLCDIIKDENETLADDEQTDSLSFIRNVYS-GFIVNNTEDPL 276
Query: 264 NDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPL 323
+ + LQ V+ S + LDL L +SLFPG++V G+ +G + D+I
Sbjct: 277 DASNCSLQC-VDQSAAV-INLDLSNLKTYSLFPGKIVAFRGAF-AGDIFVP----DEIFE 329
Query: 324 PVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAK 383
P + P KQA +H + A GPF+++ L +E L +LI +
Sbjct: 330 PKEP--SAAPFNKQAEIDLLH------------VWCACGPFSSSKTLSYEQLCDLIELVR 375
Query: 384 RKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVR--AILV 441
+++P +LIL+GPF+D P +K ++D++ + + + + + S+ + A L
Sbjct: 376 KERPNILILIGPFIDRTSPVVKSPQCCYTYDDVMEMLLTKIGEALLGINSSKWKKDAALR 435
Query: 442 PSIRDANHDFVLPQPP---FDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSG 498
PS P PP F + + I L +P I+ ++++ L
Sbjct: 436 PS---------FPTPPFRSFKQRKQQLGKNIVLLPDPAIVRIAGIEFAITASEIIQHLGR 486
Query: 499 EEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPD 558
+E+ DR+ D+ YPLYP AE + A E ++S IP
Sbjct: 487 DEIGHFDS-HEDQDRISRLVRDLFRQRS---LYPLYPAAEDVTYRLREAVERTSLSVIPH 542
Query: 559 IIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
IIILPS + +KV++ V VN L +G SGTF ++
Sbjct: 543 IIILPSILAPTVKVVA-----------NSVFVNTNALVRG-SSGTFMKL 579
>gi|401827781|ref|XP_003888183.1| DNA polymerase alpha subunit B [Encephalitozoon hellem ATCC 50504]
gi|392999383|gb|AFM99202.1| DNA polymerase alpha subunit B [Encephalitozoon hellem ATCC 50504]
Length = 420
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 169/381 (44%), Gaps = 56/381 (14%)
Query: 244 ASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIE 303
S + + G++ L+ K+V + SS++ S VRL+L L +S+FPGQVV I+
Sbjct: 69 VSSTSFYTYGIVMNPFGHKLDPKNVFIASSIDGSNDVVVRLNLEYLQRYSVFPGQVVAIK 128
Query: 304 GSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGP 363
G N +G I + + IP VVDV+ + + ++E H+ IS S AGP
Sbjct: 129 GKNGTG-SEITVEAIYCIP-----VVDVNSA--EPSEKERHAQPFIS---AFSGPYGAGP 177
Query: 364 -FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEIL 422
F D + E +LIL GPF+D ++ G ++S + + +
Sbjct: 178 EFGILDRILAE------------DADVLILTGPFID----PVEGGVSESPYS-MMEGAFI 220
Query: 423 RRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
++++++ G E + +LVPS D V PQ P D+ +I ++NP +F N
Sbjct: 221 PKIREWLS-KGPERKVVLVPSTSDVISLNVFPQGPIDLND----ERIICVSNPCSFFLNG 275
Query: 483 IKVGCCTVDVLKQLSGEEM----------SRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
V ++D ++S EE C K NDR+E S + F P
Sbjct: 276 FLVAVSSLDTALEISSEECFYDSKLDYGEDVCGKLLFGNDRLERISYHLVFQRT---FLP 332
Query: 533 LYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK------VLSLGGRNEGEEQKK 586
++P + E++++ T PDI I+ S +K+F + V++LG E+
Sbjct: 333 VFPSMNIVSYS---VPESMSMDTAPDIYIIVSRLKHFSRSVGPSVVVNLGLPTREAEKVV 389
Query: 587 CVCVNPGRLAKGEGSGTFAEI 607
C P L + + S F +
Sbjct: 390 CFIRLPETLGEKKPSIEFRHL 410
>gi|396082302|gb|AFN83912.1| DNA polymerase alpha-primase complex subunit B [Encephalitozoon
romaleae SJ-2008]
Length = 411
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 187/430 (43%), Gaps = 64/430 (14%)
Query: 179 DDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRK---HANALVSSGLY 235
D + R + ++C +P Y + +D++ + +R+ + L+ G +
Sbjct: 4 DRQVFRTLSKRRCVRSCIRIKHKPRISNFYLKKKDKYEYVRHRLATMEPYFLELLGIGSF 63
Query: 236 EEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLF 295
E P + S + + G+I L+ K++ + SS++ S V+L+L L +S+F
Sbjct: 64 E-PVN--YVSDTSFYTYGIIMNPFGYKLDSKNIFIASSIDGSNDVIVKLNLEHLQRYSVF 120
Query: 296 PGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTV-VISRPEE 354
PGQ+V I+G N +G + L IP VVD++ + + ++ + T+ S P
Sbjct: 121 PGQIVAIKGKNGTGREITVEAL-HCIP-----VVDINSAETPSEERYVQPTISAFSGPYG 174
Query: 355 ISMIIAAGP-FTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSF 413
I GP F+ D + E + +LIL+GPF+D + T S
Sbjct: 175 I------GPEFSILDRVLIEDV------------DVLILVGPFIDP-----LQNDTSESP 211
Query: 414 DEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLT 473
+ + +L++++ S+ + ILVPS D V PQ P DI +I ++
Sbjct: 212 GSMMERVFIPKLKEWLS-RRSDSKVILVPSTNDMACLNVFPQGPIDISD----ERIVCVS 266
Query: 474 NPGTFEANQIKVGCCTVDVLKQLSGEEM----------SRCSKDGTSNDRMEIYSLDISL 523
NP F N+ + ++D ++S EE C K NDR+E S +
Sbjct: 267 NPCEFFLNEFLIAISSLDTALEISSEECFYDSKSENEKDACGKLLFGNDRLERISYHLIF 326
Query: 524 MGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK------VLSLGG 577
F P++P + E++++ T PDI I+ S +KYF + V++LG
Sbjct: 327 QRT---FLPVFPSMNVVSYS---VPESISMDTAPDIYIIVSKLKYFCRNAGPSVVVNLGL 380
Query: 578 RNEGEEQKKC 587
+ E+ C
Sbjct: 381 PVKDAEKVVC 390
>gi|444724504|gb|ELW65107.1| Cdc42 effector protein 2 [Tupaia chinensis]
Length = 576
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 38/166 (22%)
Query: 252 VGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHC 311
+G I CD +G LN+KSV+L+ EHS G ++ +DL +L E+SLFPGQ V
Sbjct: 74 LGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQGV----------- 122
Query: 312 LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLY 371
PLP P+ + D+E ++V+ +A GP+TT+D++
Sbjct: 123 ----------PLPF-----YQPTEE---DREFEQSMVL---------VACGPYTTSDSIT 155
Query: 372 FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF 417
++PL +L++ +P + IL GPF+D++H Q++ S F+++F
Sbjct: 156 YDPLLDLLAIINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDVF 201
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 530 FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
+YPLYPP E + +D+ + PD++I+PS+++YF+K
Sbjct: 235 YYPLYPPQEEMAIDYENFYTYAQLPVTPDVLIIPSELRYFVK 276
>gi|170576661|ref|XP_001893716.1| DNA polymerase alpha subunit B family protein [Brugia malayi]
gi|158600101|gb|EDP37436.1| DNA polymerase alpha subunit B family protein [Brugia malayi]
Length = 581
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 123/252 (48%), Gaps = 23/252 (9%)
Query: 360 AAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHL 419
A GPFT++ L +E L +L+ K+++P +LIL+GPF+D P +K +++++ ++
Sbjct: 320 ACGPFTSSKTLSYEQLCDLMELVKKERPNILILIGPFIDRTSPVVKSPQCCYTYEDLMNM 379
Query: 420 EILRRLQDYVEYMGSEVRAILVPS-IRDANHDFVLPQPPF---DIQPPDIIHQITSLTNP 475
+L ++ + + +G++++ ++VP+ +DA P PPF + + I L +P
Sbjct: 380 -LLAKIDEVL--LGTDIQVLIVPNGKKDAAIRPSFPTPPFRSLKQRKQQLSKNILLLPDP 436
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
I+ ++++ L +E+ S +DRM D+ YPLYP
Sbjct: 437 AIVRIAGIEFAVTASEIIQHLGRDEIGH-SDSCEDHDRMSRLVRDLFRQRS---LYPLYP 492
Query: 536 PAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRL 595
A I A E ++S IP + I+PS + +KV++ V VN L
Sbjct: 493 AAHDITYRLRQAIERTSLSAIPHVTIMPSVLAPTVKVVA-----------GSVFVNTNAL 541
Query: 596 AKGEGSGTFAEI 607
+G SGTF ++
Sbjct: 542 VRG-SSGTFMKL 552
>gi|19074717|ref|NP_586223.1| DNA POLYMERASE ALPHA SUBUNIT B [Encephalitozoon cuniculi GB-M1]
gi|19069359|emb|CAD25827.1| DNA POLYMERASE ALPHA SUBUNIT B [Encephalitozoon cuniculi GB-M1]
Length = 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 173/405 (42%), Gaps = 54/405 (13%)
Query: 199 GPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD 258
P+P Y R +D++ + +R+ + E+ S + + G+I
Sbjct: 24 APKPRVSNFYLRKKDKYEYVRHRLISMKPYFLELLGIEDFKPVNNVSDSSFYTYGIITNP 83
Query: 259 GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
L+ +SV + SS++ S VRL+L L +S+FPGQ+V ++G N G + L
Sbjct: 84 FGHKLDSESVFIASSIDGSNDVAVRLNLAHLQRYSVFPGQIVAVKGKNTDGGKMTVEAL- 142
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
IP VVD++ + + + T+V +GP+ F+ L +
Sbjct: 143 HCIP-----VVDINVAKDGEEKKYMQPTIV----------AFSGPYGPGPE--FDALDRV 185
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRA 438
++ + +LIL+GPF+ + + DS E+F + R++ +++ +A
Sbjct: 186 LA----EDADVLILIGPFIGPRQYGATQ-SPDSMMKEVF----IPRIRGWLDRNAGS-KA 235
Query: 439 ILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSG 498
+LVPS D V PQ P + +I NP F N+I V ++D ++S
Sbjct: 236 VLVPSTNDMTCLNVFPQGPIGVND----ERIVCTGNPCEFFVNEILVAISSLDTPLEISS 291
Query: 499 EEM-----SRCSKDGT-----SNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQ 548
EE CS D DR+ S + F P++P +
Sbjct: 292 EECFHDSGMECSDDACGKLLFGGDRLGRISYHLIFQRT---FLPVFPSMNVVSYS---VP 345
Query: 549 EALTISTIPDIIILPSDMKYFIK------VLSLGGRNEGEEQKKC 587
E++++ T PDI I+ S +K+F + V+++G + + E+ C
Sbjct: 346 ESMSMDTAPDIYIVASKLKHFCRDVGPSIVVNIGLQAKETEKIAC 390
>gi|428672482|gb|EKX73396.1| conserved hypothetical protein [Babesia equi]
Length = 568
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 161/380 (42%), Gaps = 51/380 (13%)
Query: 217 ALENRIRKHANALV----SSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLNDKSVLLQS 272
A+ ++I + AN S GL E S+ + G I +G+ ++ +V LQ
Sbjct: 148 AINDKILRFANLFKEFCNSKGLQCEFKPLRTDSETDVTVYGRIGAEGESGIDILNVTLQG 207
Query: 273 SVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD------------ 319
S + G R ++ +LH++ E LFPGQ+VG SN S + + +
Sbjct: 208 STTNDFGVRAQIENLHQIEELCLFPGQMVGFSPSNKSSQAAVTGRCFEDNFGVRYVTSNI 267
Query: 320 QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELI 379
+ +PVD V + + ++ IH IS+I A T+NL + +
Sbjct: 268 RCGIPVDEPVTTLAAQNKFKNENIH----------ISVIRGA---LLTENLEQTNFQYVF 314
Query: 380 SYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIF-HLEILRRLQDYVEYM-GSEVR 437
KR +P ++ +GPFV ++ D F + + L+ L + ++ S +
Sbjct: 315 HKLKRDKPHVVFFMGPFVSVNQMAVEGYGISRLGDLTFLYSKFLKDLSNVAQFGPMSNTK 374
Query: 438 AILVPSIRDANHDFVLPQPPFD-----IQPPDIIHQITSLTNPGTFEANQIKVGCCTVDV 492
++VP D + LPQPP + + + I L+NPGT N I G + DV
Sbjct: 375 FVIVPHCYDVLLSYPLPQPPLNCASSPLYKKEFPENIIFLSNPGTISINGILFGVTSCDV 434
Query: 493 LKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS-----LA 547
+SG E + K + R+ L L + F P Y PA +P +++ L
Sbjct: 435 ---ISGIEKNMVCKPKEDSVRLICQQL---LQQRSLF--PSY-PASKLPAEYAVDHSMLR 485
Query: 548 QEALTISTIPDIIILPSDMK 567
Q + TIPDI++ S K
Sbjct: 486 QLEFSNETIPDIVLFSSSAK 505
>gi|449329886|gb|AGE96154.1| DNA polymerase alpha subunit b [Encephalitozoon cuniculi]
Length = 418
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 174/408 (42%), Gaps = 60/408 (14%)
Query: 199 GPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD 258
P+P Y R +D++ + +R+ + E+ S + + G+I
Sbjct: 24 APKPRVSNFYLRKKDKYEYVRHRLISMKPYFLELLGIEDFKPVNNVSDSSFYTYGIITNP 83
Query: 259 GDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLV 318
L+ +SV + SS++ S VRL+L L +S+FPGQ+V ++G N G + L
Sbjct: 84 FGHKLDSESVFIASSIDGSNDVAVRLNLAHLQRYSVFPGQIVAVKGKNTDGGKMTVEAL- 142
Query: 319 DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
IP VVD++ + + + T+V +GP+ F+ L +
Sbjct: 143 HCIP-----VVDINVAKDGEEKKYMQPTIV----------AFSGPYGPGPE--FDALDRV 185
Query: 379 ISYAKRKQPQLLILLGPFVDSEHPQIKKGTT---DSSFDEIFHLEILRRLQDYVEYMGSE 435
++ + +LIL+GPF+ + G T DS E+F + R++ +++
Sbjct: 186 LA----EDADVLILIGPFIGPR----QYGATQPPDSMMKEVF----IPRIRGWLDRNAGS 233
Query: 436 VRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQ 495
+A+LVPS D V PQ P + +I NP F N+I V ++D +
Sbjct: 234 -KAVLVPSTNDMTCLNVFPQGPIGVND----ERIVCTGNPCEFFVNEILVAISSLDTPLE 288
Query: 496 LSGEEM-----SRCSKDGT-----SNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS 545
+S EE CS D DR+ S + F P++P +
Sbjct: 289 ISSEECFHDSGMECSDDACGKLLFGGDRLGRISYHLIFQRT---FLPVFPSMNVVSYS-- 343
Query: 546 LAQEALTISTIPDIIILPSDMKYFIK------VLSLGGRNEGEEQKKC 587
E++++ T PDI I+ S +K+F + V+++G + + E+ C
Sbjct: 344 -VPESMSMDTAPDIYIVASKLKHFCRDVGPSIVVNIGLQAKETEKIAC 390
>gi|630708|pir||S43564 R01H10.1 protein (clone R01H10) - Caenorhabditis elegans
Length = 475
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 140/296 (47%), Gaps = 39/296 (13%)
Query: 214 RFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCD---GDGHLNDKSVLL 270
R + +RI+K +V G +P++ S ++ G + D + + SV L
Sbjct: 205 RMADIAHRIQKSFEEIVDWG------NPSIPSVDVVYTYGQVIHDETKDNEKFGEHSVAL 258
Query: 271 QSSVEHSGGQRVRLDLHKLGE-FSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
+ G +R+D K+ E +LFPGQ++ + G+N +G L K+ LPV+ V
Sbjct: 259 M--INDEDGTMIRMDFSKMTEDITLFPGQIIAVRGTNETGEELQVDKIFQPAALPVNPV- 315
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
E +T I A GP+T TDN +E L EL+ ++P +
Sbjct: 316 ------------ETDTTKEI--------WFACGPYTATDNCGYEHLCELLDKVVAEKPDI 355
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSI-RDAN 448
L+L GPFVD ++ + K T + ++D + ++L ++++ + +G++ + I+ P+ RD
Sbjct: 356 LMLAGPFVDKKNTFLNKPTFNITYDNLLE-DLLLKVKETL--VGTKTQVIIQPNASRDLC 412
Query: 449 HDFVLPQPPF--DIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
V P PF + + I ++ + +P F + ++V + + ++ LS E S
Sbjct: 413 VPPVFPSAPFQQNRKLDKIKKELIFVADPCIFRISGVEVAMTSSEPIQALSNTEFS 468
>gi|60098645|emb|CAH65153.1| hypothetical protein RCJMB04_4g15 [Gallus gallus]
Length = 402
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLND 265
FM+ R D L R+ + AL S E + +Q ++ +G I CD +G LN
Sbjct: 219 FMFQRAADVREVLLWRMEQIGAALRSHHCIPEFGSLLLPAQDSVTVLGRIGCDSNGKLNP 278
Query: 266 KSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLP 324
KS +L+ E S G ++ L+L +L EFSLFPGQVV +EG+N +G L+ SKL + +PLP
Sbjct: 279 KSAVLEGDRERSAGAQIPLELSELQEFSLFPGQVVVVEGTNSTGRRLVVSKLYEGVPLP 337
>gi|330790352|ref|XP_003283261.1| hypothetical protein DICPUDRAFT_96307 [Dictyostelium purpureum]
gi|325086808|gb|EGC40192.1| hypothetical protein DICPUDRAFT_96307 [Dictyostelium purpureum]
Length = 606
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 45/279 (16%)
Query: 291 EFSLFPGQVVGIEGSNPSG-HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVI 349
++ +F GQ++ E G + A ++ + +PLP +P+
Sbjct: 312 DYCMFSGQILMTEAKKAVGSNVYYAKQMYEPLPLPF------YPNE-------------- 351
Query: 350 SRPE--EISMIIAAGPFTTTDNLY-FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKK 406
SR E +I++++A+GPF + + + PL +L S ++P LIL+GPF+D + + K
Sbjct: 352 SRKETGDITVMVASGPFDLSKPVVDYVPLHDLCSIVSERKPHCLILMGPFIDDTNHHLSK 411
Query: 407 GTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI- 465
+ +F EIF+ ++ E + S + ++VPS++D +HD++LPQPPF+ P+I
Sbjct: 412 YS--ETFTEIFN----NLMKTISEKIPSSTKVLIVPSLKDVDHDYILPQPPFN---PNIN 462
Query: 466 -IHQITSLTNPGTFEANQ-IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISL 523
I + NP T N+ +G T ++ + E + T + +I I+
Sbjct: 463 LPSNILFVPNPFTLLINESFSIGLTTTEIYHHI--ESKANFKNKLTKDKSQDICKSIINQ 520
Query: 524 MGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIIL 562
FYPL+P I + + + L PDI+IL
Sbjct: 521 RN----FYPLHPAEAPISMRY---LQHLNFHFTPDILIL 552
>gi|268637911|ref|XP_640231.2| DNA polymerase alpha subunit B [Dictyostelium discoideum AX4]
gi|284018079|sp|Q54S08.2|DPOA2_DICDI RecName: Full=DNA polymerase alpha subunit B
gi|256012935|gb|EAL66225.2| DNA polymerase alpha subunit B [Dictyostelium discoideum AX4]
Length = 623
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 55/289 (19%)
Query: 287 HKLGEFSLFPGQVVGIEGSNPSG-HCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHS 345
+ + ++S+F GQVV E +G H +KL PLP +
Sbjct: 321 NNIPDYSMFSGQVVMAESKKIAGSHFYYTNKLYTPNPLPFFS------------------ 362
Query: 346 TVVISRPE--EISMIIAAGPF----TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDS 399
R E +I+++IA+GPF +T D + PL +L + K+P +L L+GPF+D
Sbjct: 363 ----QRKECGDINVMIASGPFDLQKSTPD---YTPLDDLCNVVSNKKPHILFLMGPFIDE 415
Query: 400 EHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFD 459
+ IKK + +F E+F+ ++++L D + S + ++VPS+ D +H+++ PQPP+
Sbjct: 416 SNVHIKKYS--ETFSELFN-NLMKKLNDNI---PSTTKVLIVPSLNDVDHEYIFPQPPY- 468
Query: 460 IQPPDIIHQITSLTNPGTFEANQ-IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM--EI 516
+ ++ I + NP T N+ +G + D+ L SK N +I
Sbjct: 469 VPSVNLNSNILFVPNPFTLIINESFTIGITSSDIYNNL-------VSKAHFKNKHTPEDI 521
Query: 517 YSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSD 565
+++ I+ +YP++P P+ Q PDI+++P +
Sbjct: 522 FNMIINQNN----YYPMHPAQA--PISMRYLQHLNFPGFTPDILVVPKN 564
>gi|449016093|dbj|BAM79495.1| probable DNA polymerase alpha, subunit B [Cyanidioschyzon merolae
strain 10D]
Length = 604
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 168/415 (40%), Gaps = 61/415 (14%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
+ M+D E R + RI +AL SSG E + + F VG + GH
Sbjct: 208 KLMFDCLEKRKESQRKRIHDAFDALQSSGRIESLMETSGEPVDGRFIVGQVLFSIQGHER 267
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD----- 319
++ V L E G V+L+L KL + L+PG+V G G + GH ++VD
Sbjct: 268 NREVFL----EDDEGVMVQLELSKLHTYLLYPGKVAGFVGLDLPGHIFEVHQIVDDMFVT 323
Query: 320 -QIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKEL 378
++P VV + PS RP + +++ GP+ ++ P ++
Sbjct: 324 EEVPRQRKRVVSMKPSSL--------------RP-KWRILLMVGPYIQPED----PDWDI 364
Query: 379 ISYAKRK----QPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGS 434
+ K+K +P + ++GP V+ E+P T + + +L+ LQ+ M S
Sbjct: 365 FDFLKKKVAELEPDAVCIMGPLVE-ENPDAGDATLNLVDKFVQGERVLQALQNIAREMRS 423
Query: 435 EVRAILVPSIRDANHDF-VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVL 493
++ P+I D H V PQ P++ I+ + NP +F + V ++
Sbjct: 424 TT-FLISPAIDDLMHHLPVFPQKPYEFSADPIV----KIGNPTSFRIELDRRDSMRVAIM 478
Query: 494 KQLSGEEMS-RCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALT 552
+EM C G+ RME S +I F P P IP+D+SL QE
Sbjct: 479 NLPILDEMRLSCLCGGSKIPRMEECSAEIIRQDTLF---PYDPSGSKIPIDYSLVQELKP 535
Query: 553 ISTIPDIIILPSDMKYFIKVLSLGG--RNEGEEQKKCVCVNPGRLAKGEGSGTFA 605
+ PD+++ +GG N E C V PG+ FA
Sbjct: 536 MR--PDLLV-------------IGGSESNFACEAHGCCIVCPGKFCNRTSPTEFA 575
>gi|303391116|ref|XP_003073788.1| DNA polymerase alpha-primase complex subunit B [Encephalitozoon
intestinalis ATCC 50506]
gi|303302936|gb|ADM12428.1| DNA polymerase alpha-primase complex subunit B [Encephalitozoon
intestinalis ATCC 50506]
Length = 419
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 56/360 (15%)
Query: 245 SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
S + + G+I L+ ++ + S+++ S V+L+L L +S+FPGQ+V ++G
Sbjct: 70 SSTSFYTYGIIMNPFGHKLDSQNTFIASNIDGSNDVVVKLNLSHLRRYSVFPGQIVAVKG 129
Query: 305 SNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPF 364
N +G + L IP VVD++ ++ +E H+ + S++ +GP+
Sbjct: 130 KNITGGEITVETL-HCIP-----VVDINE--EKDGKEEKHN--------QPSIVAFSGPY 173
Query: 365 TTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR 424
F+ L ++ ++ +LIL+GPF+ S H G+ D S + E + R
Sbjct: 174 GFASE--FDVLDRIL----MEEADVLILVGPFISSAH-----GSEDHSPASMMEKEFVPR 222
Query: 425 LQDYV-EYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQI 483
++ ++ E GS+V +LVPS+ D V PQ P DI +I +NP F N+
Sbjct: 223 IRRWLNERPGSKV--VLVPSVNDITCLGVFPQGPIDIDE----ERIVCTSNPCEFFLNEF 276
Query: 484 KVGCCTVDVLKQLSGEEM----------SRCSKDGTSNDRMEIYSLDISLMGPAFFFYPL 533
V ++D ++S EE C DR++ + + F P+
Sbjct: 277 LVCVSSLDTPLEISSEECFHDSGLESEDDACGNLLFGGDRLKRIAYHLIFQRT---FLPV 333
Query: 534 YPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK------VLSLGGRNEGEEQKKC 587
+P + E +++ T PDI I+ S +K+F + V++LG + E+ C
Sbjct: 334 FPSRNVVSYS---VPENMSMDTAPDIYIVVSRLKHFSRDVGPSVVVNLGLQTGKTEKVAC 390
>gi|385303916|gb|EIF47960.1| b subunit of dna polymerase alpha-primase complex [Dekkera
bruxellensis AWRI1499]
Length = 208
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 240 DPTVASQRTLFAVGMICCDG-----DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSL 294
+P + SQ + AVG I D D LN S+ L++S G+RVRLDL L E+SL
Sbjct: 36 NPNIQSQAEILAVGRIVXDSPLTEYDADLNXDSLFLEASRSGGIGERVRLDLAALDEYSL 95
Query: 295 FPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
FPGQ+V G NP+G +K + IP V+ + DQ+ + +
Sbjct: 96 FPGQIVCFRGLNPTGTVFKVTKQYN-IPYLGAPVMSID-------DQKSYRDQLGGEDAL 147
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRK-QPQLLILLGPFVDSEHPQIKKG 407
+ + + AGP+T++ L F+ L + + + +P +I+ GPF E PQ G
Sbjct: 148 MKVAVTAGPYTSSKELNFDLLSKFVDRMNNQVKPNTIIMFGPFFGCE-PQANTG 200
>gi|341878849|gb|EGT34784.1| CBN-DIV-1 protein [Caenorhabditis brenneri]
Length = 579
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 187/443 (42%), Gaps = 70/443 (15%)
Query: 184 RIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTV 243
++ +G KCS+++ E +M + + NR+++ + G +P +
Sbjct: 183 KLYSGDKCSMVI-----EAKSIWMSE--------VANRLQETFEEIADWG------NPLI 223
Query: 244 ASQRTLFAVGMICCDG---DGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE-FSLFPGQV 299
S ++ G + D + + SV L ++ E G VRLDL K+ + +LFPGQ+
Sbjct: 224 PSVDIVYTYGQVIHDETKENEKFGEHSVALMTNDED--GTMVRLDLSKVTDDVTLFPGQI 281
Query: 300 VGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMII 359
+ + G N SG ++ LPV HP ++ + ++I
Sbjct: 282 IAVRGINESGEDFQVDRIYTPTALPV------HP-VETGVTKDIW--------------F 320
Query: 360 AAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHL 419
A GP+T DN +E L EL+ ++P +LIL GPF+D ++ + K + ++D +
Sbjct: 321 ACGPYTAMDNCGYEHLCELLDKVVAEKPDILILAGPFIDRKNTFLNKPSFTITYDNLLE- 379
Query: 420 EILRRLQDYVEYMGSEVRAILVPS-IRDANHDFVLPQPPFDIQPP---DIIHQITSLTNP 475
++L R+++ + + ++ + PS RD V P PF I+ + + + +P
Sbjct: 380 DLLVRIKE--KLINTKTEVFIQPSGSRDLCVPAVFPTAPFHIKTRKLDSVRRDLQFIPDP 437
Query: 476 GTFEANQ--IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPL 533
Q I++ + + ++ LS E R S + + DR+ S S M YPL
Sbjct: 438 CILRIGQKGIEIAVTSSEPIQGLSNAEFHR-SVNQENTDRIARLS---SHMLTQHSLYPL 493
Query: 534 YPPAEGIPLDFSLAQEALTISTIPDIIILPSDM---------KYFIKVLSLGGRNEGEEQ 584
P +P E +++ P I+ P+ + F+ +L G
Sbjct: 494 EPTE--VPSSMGDILEVCRLTSTPHIVFAPTKLAPSVKNVNGSVFVNSSTLAKGPTGNYL 551
Query: 585 KKCVCVNPGRLAKGEGSGTFAEI 607
K + + G + GE ++ I
Sbjct: 552 KMSINLQGGEMLPGETVADYSNI 574
>gi|429966415|gb|ELA48412.1| hypothetical protein VCUG_00021 [Vavraia culicis 'floridensis']
Length = 447
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 174/430 (40%), Gaps = 103/430 (23%)
Query: 201 EPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGD 260
EP F Y R E+ + +++R+ + + + + +AS F +G + G+
Sbjct: 29 EPKNLF-YLRKEEDYRFIKHRLEFMKDGYLELLELQNFSPINMASTADTFVLGFVITVGE 87
Query: 261 GHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQ 320
+ + ++++ S V L+L +L +SLFPGQVV I+G NP+G+ +I K+ D
Sbjct: 88 ------KIFVFNNIDESNDTLVELNLSELDRYSLFPGQVVAIKGHNPNGNEIIVRKIYDS 141
Query: 321 IPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFT-----------TTDN 369
LPV+ D+++ ++ S+ +GPF N
Sbjct: 142 PVLPVNFF--------DERDRKVD-----TKNNSFSVCFISGPFNDDVKTEHFNSPDVYN 188
Query: 370 LYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQD-Y 428
+F L ++ + L++LGPF++++ +SS D L R++D +
Sbjct: 189 HFFRSLDQITTM----DADYLVVLGPFIENKF-------LNSSLD-------LERVRDIF 230
Query: 429 VEYMGSEV------RAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ 482
V + + + + I VPS D + + P P + I+ SL+NP F +
Sbjct: 231 VAKLNAWINKKPFRKVITVPSTDDVHTLGMYPSAPLGCKSASIL----SLSNPTQFYIDN 286
Query: 483 IKVGCCTVDVLKQLSGEE------------------------------MSRCS-KDGTSN 511
+ CT D+L +S E + C+ K
Sbjct: 287 VLFSVCTYDMLLHMSSTEVFFDVDENASLPESEINHRSDRVDSNVLNTLDSCAPKAQKRT 346
Query: 512 DRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
R+E S I F P +PP + + ++ S E +S PD ++ S +K FI+
Sbjct: 347 KRIERLSAHIIYQRC---FLPCFPPRKVVSINRS---ECFDMSVAPDFFVICSKLKTFIQ 400
Query: 572 VLSLGGRNEG 581
R+EG
Sbjct: 401 ------RDEG 404
>gi|268563773|ref|XP_002647009.1| C. briggsae CBR-DIV-1 protein [Caenorhabditis briggsae]
Length = 584
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 183/448 (40%), Gaps = 58/448 (12%)
Query: 183 KRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTD-- 240
K +K G K V P + D++ +A R+ + A L ++ EE D
Sbjct: 167 KGLKGGAKHDDKVKIVSKLPNNFYGGDKSSMVIDAKSTRMSEFARRLQATN--EEIADWG 224
Query: 241 -PTVASQRTLFAVGMICCDGDGHLNDK----SVLLQSSVEHSGGQRVRLDLHKLGE-FSL 294
P V S ++ G I D D N+K SV L + G +RL+ K+ E +L
Sbjct: 225 NPLVPSVDFVYTYGQIVHD-DTRDNEKFGENSVALM--INDEDGTMIRLNFSKVTEDVTL 281
Query: 295 FPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE 354
FPGQ++ + G+N +G L ++ LPV+ V + + ++I
Sbjct: 282 FPGQIIAVRGTNETGEELQVDRIFTPKALPVNPV-------ETDITKDIW---------- 324
Query: 355 ISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFD 414
A GP+T DN +E L EL+ ++P +L+L GPFVD ++ + K ++D
Sbjct: 325 ----FACGPYTAMDNCGYEHLCELLDQVVAEKPDILVLAGPFVDRKNTFLNKPNLTITYD 380
Query: 415 EIFHLEILRRLQDYVEYMGSEVRAILVP-SIRDANHDFVLPQPPFDIQPPD---IIHQIT 470
+ ++L ++++ + +EV I+ P S RD V P P F + I ++
Sbjct: 381 NLME-DLLCKIKEKLVNTKTEV--IIQPSSSRDLCTPSVFPSPAFRFKSRKLDMIKKELH 437
Query: 471 SLTNPGTFEANQ--IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAF 528
+ +P Q + + + + ++ LS E R S+ + S ++
Sbjct: 438 FVPDPCIIRIGQNGVDMAVTSSEPIQGLSNSEFHRSINQENSDRIARLCSHLLTQQS--- 494
Query: 529 FFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDM---------KYFIKVLSLGGRN 579
YPL P IP E +++ P I+ P+ + FI +L
Sbjct: 495 -LYPLEPTE--IPSSLGDLLEVCQLTSTPHIVFAPTKLASSAKKVNGSVFINSSTLAKGP 551
Query: 580 EGEEQKKCVCVNPGRLAKGEGSGTFAEI 607
G K + +N G L E +A I
Sbjct: 552 TGNYVKMSINLNAGELGPFETVADYANI 579
>gi|363745960|ref|XP_003643474.1| PREDICTED: DNA polymerase alpha subunit B-like, partial [Gallus
gallus]
Length = 203
Score = 78.2 bits (191), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 65/114 (57%)
Query: 206 FMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLND 265
FM+ R D L R+ + AL S E + +Q ++ +G I CD +G LN
Sbjct: 90 FMFQRAADVREVLLWRMEQIGAALRSHHCIPEFGSLLLPAQDSVTVLGRIGCDSNGKLNP 149
Query: 266 KSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVD 319
KS +L+ E S G ++ L+L +L EFSLFPGQVV +EG+N +G L+ SKL +
Sbjct: 150 KSAVLEGDRERSAGAQIPLELSELQEFSLFPGQVVVVEGTNSTGRRLVVSKLYE 203
>gi|76155616|gb|AAX26907.2| SJCHGC07999 protein [Schistosoma japonicum]
Length = 213
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 27/188 (14%)
Query: 275 EHSGGQR--VRLDL---HKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVV 329
E SG + V LDL L +S++ GQ + I G NP+G C + + QIP+ +
Sbjct: 48 ERSGSETDAVHLDLGFSRDLSCYSVYSGQPLLIRGVNPTG-CSLGVMEIFQIPISKPPAI 106
Query: 330 DVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQL 389
++ +H +++A GP+T +++ L L+ K+ +P +
Sbjct: 107 NL-----DKCSANLH------------IMVACGPYTLSNSHDPTGLFNLLRSVKQSKPHV 149
Query: 390 LILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANH 449
LILLGPFVDSEHP I+ ++++++E+F + + ++ ++ ++ I+V S R+ +H
Sbjct: 150 LILLGPFVDSEHPGIQS-YSETTYEELFQSRV-NSVSEWCSHL--SIKLIIVSSWREVHH 205
Query: 450 DFVLPQPP 457
D V P PP
Sbjct: 206 DPVYPTPP 213
>gi|124810140|ref|XP_001348776.1| DNA polymerase alpha subunit, putative [Plasmodium falciparum 3D7]
gi|23497676|gb|AAN37215.1|AE014826_14 DNA polymerase alpha subunit, putative [Plasmodium falciparum 3D7]
Length = 539
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 167/378 (44%), Gaps = 44/378 (11%)
Query: 250 FAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPS 308
+ G I + + ++++ +++L+ +++ + G + +L +L + F GQ++ I+G
Sbjct: 158 YIFGRIYTENEMNISESNIILEGNMKWNNGDKAQLLNLTDMRNICFFLGQILAIKGKKEI 217
Query: 309 GHCLI---ASKLVDQIPLPVDAVVDVHPSMKQ------ALDQEIHSTVV-ISRPEEISMI 358
I S + +P + +D +K D +IH ++ + E I ++
Sbjct: 218 NQFSIKYYVSNVYAGLPSHLKVQIDKEFVLKHFNTKEIEEDSKIHENILHLYNNENIHIM 277
Query: 359 IAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD----SEHPQIKKGTTDSSFD 414
I G + DN Y E L + K P ++++ GPF+ SE Q K G + ++
Sbjct: 278 ICNG-YIYNDNNYSENLDNFLKVVNEKLPHVVLIFGPFLYIRNFSETIQ-KIGDINIIYE 335
Query: 415 EIFHLEILRRLQDYVEY-MGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIH-QITSL 472
+F +++ + + + + ++PSI D+ + + LPQPPF + +I + L
Sbjct: 336 NLF-----KKITKFAKNEILEKTHFFIIPSIYDSINIYPLPQPPFYYENSNINSPNVHFL 390
Query: 473 TNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYP 532
+NP N++K+ + D++ L+ + R S+ ++++ L ++ F P
Sbjct: 391 SNPSYIYINELKIALTSCDIVYNLTRNLLCRPSE-------LKLFYLFEQILRQLSLF-P 442
Query: 533 LYPPAEGIPLDFSLAQEALTISTIPDIIILPS--DMKYFIKVLSLGGRNEGEEQKKCVCV 590
YP I + + +PDI I PS + K +IK + +K +C
Sbjct: 443 SYPSEYNIEIT-KFKNLLFQPNRLPDIFIYPSFTNEKSYIKEV---------HKKLFICP 492
Query: 591 NPGRLAKGEGSGTFAEIY 608
+ K + S F+ IY
Sbjct: 493 YSIDVNKAQPSKFFSNIY 510
>gi|340504413|gb|EGR30858.1| hypothetical protein IMG5_122330 [Ichthyophthirius multifiliis]
Length = 380
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 147/373 (39%), Gaps = 54/373 (14%)
Query: 251 AVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGH 310
VG I C G N+ +++L+ ++ + K +FP Q++ +EG +
Sbjct: 20 VVGRISCLEKGFSNETNLILEIDSKNYFHLNFENEYFKQENIFIFPNQILMLEGFLENNR 79
Query: 311 CLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNL 370
+ V +VHP + + + + + + +I II+ GPF+
Sbjct: 80 KYLN-------------VTEVHPYIWKNITFQENQEQIFDNYRKI--IISTGPFSPKSTF 124
Query: 371 YFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
F L+ AK + LILLGPF+D E+ +K T+D D F +
Sbjct: 125 NFNAFDLLLKKAKEIKVSALILLGPFLDIENQVVK--TSDLGADLSFEQLQNSLFERAAT 182
Query: 431 YMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQ-ITSLTNPGTFEANQIKVGCCT 489
+G V+ I++PS +D +PQ P +IQ Q I S +NP FE +++
Sbjct: 183 SLGPNVQIIVIPSTKDVLSFENIPQQPLEIQISSNYQQNIKSFSNPAYFEMDELSFYIGN 242
Query: 490 VDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP---------PAEGI 540
D+ S+ K+ N +I ++ S+ Y +YP E I
Sbjct: 243 SDIALNTYMGSFSKNKKN--QNPIQQIPNVFESIFSQK-NLYSMYPFLDQKDPKKITENI 299
Query: 541 PL--------DFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
L +F + E P I+I PS++ F ++ V +NP
Sbjct: 300 NLEKIGNFDVNFDVENEDF-----PKIVISPSNLPCF-----------AQKINDTVVINP 343
Query: 593 GRLAKGEGSGTFA 605
G + K E G FA
Sbjct: 344 GYVIKQETKGNFA 356
>gi|149062124|gb|EDM12547.1| polymerase (DNA directed), alpha 2, isoform CRA_b [Rattus
norvegicus]
Length = 354
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + D L +I + + L E T V +Q + +G I
Sbjct: 199 PEPLTSSYKTMFQQLPDIREVLTCKIEELGSELKEHYKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +D+ +L ++SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGRLNSKSVILEGDREHSSGAQIPVDMSELKDYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 L--VDQIPLP 324
L V PLP
Sbjct: 319 LYEVQGGPLP 328
>gi|118382991|ref|XP_001024651.1| hypothetical protein TTHERM_00614820 [Tetrahymena thermophila]
gi|89306418|gb|EAS04406.1| hypothetical protein TTHERM_00614820 [Tetrahymena thermophila
SB210]
Length = 595
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 162/390 (41%), Gaps = 84/390 (21%)
Query: 252 VGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHK---LGEFSLFPGQVVGIEGSNPS 308
VG + +G LN ++ +E + Q L G LFP Q+V ++G
Sbjct: 235 VGRLISTENGFLNTTNL----RIELNRNQYFDLVFENDFDFGNNVLFPNQIVMVKGIINE 290
Query: 309 GHCLIASKLV-DQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTT 367
L+ S+L+ D I D + HP + +++ E +++AAGPF+T
Sbjct: 291 KEELVVSELITDHIKEITD---EEHPKIDN-----------LNQDESQLIMVAAGPFSTV 336
Query: 368 DNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRR--L 425
+ + ++ AK K+ LILLGPF+D ++ +K G+ + E + E L+
Sbjct: 337 MSTQYTSFDNILHVAKTKKVSTLILLGPFLDIKNEILKDGSIIINSKE-YTFEQLQNSLF 395
Query: 426 QDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKV 485
+ V+ + + + I+VPS RD +PQ +I+ + + I S +NP + ++++V
Sbjct: 396 EKAVKELEGKTQIIIVPSTRDILSTDSIPQMSLEIKVSEHKNSIHSYSNPAYIDIDKLRV 455
Query: 486 GCCTVDV----------LKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYP 535
DV K++ + SR + N + +YS+ YP+
Sbjct: 456 YIANSDVGMITLQNSLLDKKIPYMQQSRLTFKALMN-QQNLYSI-----------YPMRN 503
Query: 536 PAEG----------------IPLDFSLAQEALTISTIPDIIILPSDM-KYFIKVLSLGGR 578
P + IP D+ L Q P III PS + K+ K+ +
Sbjct: 504 PQDSQQILETVKLPNINDFDIPFDYQLEQ-------YPHIIISPSSLPKFATKIYN---- 552
Query: 579 NEGEEQKKCVCVNPGRLAK-GEGSGTFAEI 607
V +NP + + G +G FA I
Sbjct: 553 --------TVVINPNYVIRDGSQAGNFAII 574
>gi|13905292|gb|AAH06945.1| Pola2 protein [Mus musculus]
gi|148701241|gb|EDL33188.1| polymerase (DNA directed), alpha 2, isoform CRA_a [Mus musculus]
Length = 360
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 199 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 258
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 259 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 318
Query: 317 LVD 319
L +
Sbjct: 319 LYE 321
>gi|68075139|ref|XP_679486.1| DNA polymerase alpha subunit [Plasmodium berghei strain ANKA]
gi|56500245|emb|CAH96520.1| DNA polymerase alpha subunit, putative [Plasmodium berghei]
Length = 541
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 160/380 (42%), Gaps = 50/380 (13%)
Query: 253 GMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPSGHC 311
G I D + ++++ +++L+ ++ ++ G + +L +L + F GQ++ I+G
Sbjct: 161 GRIYTDNEINISESNIILEGNINYNNGDKAQLLNLSSMKNLCFFLGQILAIKGKKEINQY 220
Query: 312 LI---ASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEIS------------ 356
I S + +P + +D +K QEI + + + EE+
Sbjct: 221 SIKYYVSSIYAGLPTHLKVKIDNDILLKHFNCQEIENDI---KSEELDNDKILQMYNNDN 277
Query: 357 -MIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF--VDSEHPQIKK-GTTDSS 412
I+ + DN Y + + K P ++++ GPF + + + I+K G +
Sbjct: 278 IHIMVCNGYVYKDNDYSDYFDIFLKIVNEKLPHVVLIFGPFLYIRNFNEAIQKIGDINVI 337
Query: 413 FDEIFHLEILRRLQDYVEYMGSE-VRAILVPSIRDANHDFVLPQPP-FDIQPPDIIHQIT 470
+D IF +++ + E ++PSI D+ + + LPQPP F+ + + +
Sbjct: 338 YDNIF-----KKITKLAKNEALEKTHFYIIPSIYDSINIYPLPQPPFFNENYVNASNNVH 392
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF 530
L+NP N++K+ + D++ L+ + R S+ T Y + L +FF
Sbjct: 393 FLSNPSYIYINELKIALTSCDIIYNLNKNLLCRPSEMKT------FYLFEQILRQLSFF- 445
Query: 531 YPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS--DMKYFIKVLSLGGRNEGEEQKKCV 588
P YP I + + +PDI + PS + K ++K ++ +
Sbjct: 446 -PSYPSEYNIEIT-KFKNLLFQPNRLPDIFLFPSFTNEKSYVK---------DVHKRLFI 494
Query: 589 CVNPGRLAKGEGSGTFAEIY 608
C L K E S F+ IY
Sbjct: 495 CPYSLDLNKAEPSNFFSNIY 514
>gi|74202752|dbj|BAE37473.1| unnamed protein product [Mus musculus]
Length = 320
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 200 PEP---GCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMIC 256
PEP + M+ + L ++I + + L E T V +Q + +G I
Sbjct: 159 PEPLTGSYKAMFQQLMGVREVLTSKIEELGSELKEHHKIEAFTPLLVPAQEPVILLGQIG 218
Query: 257 CDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASK 316
CD +G LN KSV+L+ EHS G ++ +DL +L E+SLFPGQVV +EG N +G L A+K
Sbjct: 219 CDSNGKLNSKSVILEGDQEHSYGAQIPVDLSELKEYSLFPGQVVIMEGFNTTGRRLTATK 278
Query: 317 LVD 319
L +
Sbjct: 279 LYE 281
>gi|12861304|dbj|BAB32165.1| unnamed protein product [Mus musculus]
Length = 121
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 530 FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVC 589
+YPLYPP E + +D+ + PD+ I+PS+++YF+K + CVC
Sbjct: 29 YYPLYPPHEDMAIDYENFYTYAQLPVTPDVFIVPSELRYFVKDIF-----------GCVC 77
Query: 590 VNPGRLAKGEGSGTFAEIYYHGSPEMMNA 618
VNPGRL KG+ GTF +Y P+ M+
Sbjct: 78 VNPGRLTKGQVGGTFGRLYLRRQPKAMDG 106
>gi|322718571|gb|ADX07321.1| putative ectomycorrhiza-upregulated exo-beta-1,3-glucanase GH5
[Flammulina velutipes]
Length = 1690
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 164/404 (40%), Gaps = 98/404 (24%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
R+MY++ +R L+++I + + + DP ++ + VG I D + +
Sbjct: 152 RYMYEKVLERSEILDDQIAQFGERISKHYGIKSLADPASTTEEEVTVVGRISQDTEQTTS 211
Query: 265 ---DKSVLLQSSVEHSGGQRV----------RLDLHKLGEFSLFPGQVVGIEGSNPSGHC 311
D+S L+ + + G +RV R G LFPG +V ++G N G
Sbjct: 212 TKLDESTLIIDTSRNEGSRRVPVRFEPSLKIRGGAKGAGGLGLFPGMMVALKGKNGGGGW 271
Query: 312 LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLY 371
S+++ IP P + V S
Sbjct: 272 FSVSEIL--IPPPYRTLSVVSKS------------------------------------- 292
Query: 372 FEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEY 431
EP + S++ LGPFVD+ H I+ G D S ++F +++Y++
Sbjct: 293 -EPKVDSSSFS----------LGPFVDATHKSIQAGDIDHSPLQLFQKRFTTEIRNYLDS 341
Query: 432 MGSEVRAILVPSIRD--ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCT 489
+ A+LVP+ RD ++H V PQ F+ + +I ++NP +F N + G T
Sbjct: 342 APGSI-AVLVPNTRDLISSHA-VYPQGAFESDVTNSDPRIRLVSNPASFSINNVTFGITT 399
Query: 490 VDVLKQLSGEEMS-RCSK------------DGTSNDRMEIYSLDISLMGPAFFFYPLYP- 535
D++ L +E+ R + DG +N + +YP++P
Sbjct: 400 HDIVFHLKSQEVGIRGDEVDSVEPELPEDVDGIANACRHLLQQQS--------YYPMFPV 451
Query: 536 ---PAEGIPLDFSLAQEALTISTI-----PDIIILPSDMKYFIK 571
+E + LD + + L +ST+ PD++++P+ +K F+K
Sbjct: 452 PLDESERVNLDLTHSS-GLAMSTVDGAYAPDVLVVPTRLKQFVK 494
>gi|190346827|gb|EDK39005.2| hypothetical protein PGUG_03103 [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 262 HLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQI 321
+LN S+ L++S GQR+ LDL + ++SLFPGQ+ ++G NP+G + ++
Sbjct: 21 NLNSTSLFLETSRLGGIGQRIPLDLTNVSDYSLFPGQIAVLKGRNPTGSSFVVQEICS-- 78
Query: 322 PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISY 381
LP + H S KQ L+Q + ++IA+GP++ L F + +L+
Sbjct: 79 -LP---SLGSHVSSKQELEQYQEQV----GEGGLKILIASGPYSNAHTLDFTKMNKLVER 130
Query: 382 AKR-KQPQLLILLGPFVDSEHPQIKKG 407
+P +++L GPF+D H + +G
Sbjct: 131 INTVSKPHVVLLFGPFIDINHNAVAQG 157
>gi|146418818|ref|XP_001485374.1| hypothetical protein PGUG_03103 [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 262 HLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQI 321
+LN S+ L++S GQR+ LDL + ++SLFPGQ+ ++G NP+G + ++
Sbjct: 21 NLNSTSLFLETSRLGGIGQRIPLDLTNVSDYSLFPGQIAVLKGRNPTGSSFVVQEICS-- 78
Query: 322 PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISY 381
LP + H S KQ L+Q + ++IA+GP++ L F + +L+
Sbjct: 79 -LP---SLGSHVSSKQELEQYQEQV----GEGGLKILIASGPYSNAHTLDFTKMNKLVER 130
Query: 382 AKR-KQPQLLILLGPFVDSEHPQIKKG 407
+P +++L GPF+D H + +G
Sbjct: 131 INTVSKPHVVLLFGPFIDINHNAVAQG 157
>gi|146189563|emb|CAM91783.1| hypothetical protein [Platynereis dumerilii]
Length = 139
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Query: 383 KRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVP 442
+R P + IL GPF+D +HP+I+KG +++++E F I +L + G+++ ++VP
Sbjct: 2 QRDPPDVCILCGPFLDYKHPEIEKGNLETTYEEFFSTTI-AQLSSAITRNGTQL--VVVP 58
Query: 443 SIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMS 502
S RD +H V PQPPF P ++H + ++P T I +G + D++ L EE+S
Sbjct: 59 SQRDIHHQPVYPQPPFTNNKP-MVHFV---SDPSTINIEGIVLGLTSTDIMFHLGAEEIS 114
>gi|221059175|ref|XP_002260233.1| DNA polymerase alpha subunit [Plasmodium knowlesi strain H]
gi|193810306|emb|CAQ41500.1| DNA polymerase alpha subunit, putative [Plasmodium knowlesi strain
H]
Length = 547
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 165/389 (42%), Gaps = 47/389 (12%)
Query: 250 FAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPS 308
+ G I D + ++++ +++L+ S+ + G + +L +L+ + F GQ++ I+G
Sbjct: 158 YIFGRIFTDNEINISESNIILEGSLNLNNGDKAQLLNLNHIKNICCFLGQILAIKGKKEI 217
Query: 309 GHCLIASKLVD---------QIPLPVDAVVDVHPSMKQ------ALDQEIHSTVVISRPE 353
I + + I L A + H + K+ ++ I + V+
Sbjct: 218 NQYSIKYYVSNIYAGLPTHLNIKLENTAFLLKHFNGKEIEEDNKCAEERIEPSKVLQLYN 277
Query: 354 EISM-IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD----SEHPQIKKGT 408
+ ++ I+A + DN Y + L L+ K P ++++ GPF+ SE Q K G
Sbjct: 278 DDNIHIMACNGYVYADNEYSDNLDNLLKIVNEKLPHVVLIFGPFLYIRNFSETIQ-KIGD 336
Query: 409 TDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI-IH 467
+ ++ IF I + +E + ++PSI D+ + + LPQPPF + +
Sbjct: 337 INVIYENIFKKIINLAKSEPLE----KTHFFIIPSIYDSINVYPLPQPPFIYENSYANLA 392
Query: 468 QITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPA 527
+ L+NP N++K+ + DV+ LS M R S+ M+++ L ++
Sbjct: 393 NVHFLSNPSYIYINELKIALTSCDVIYNLSKNLMCRPSE-------MKVFYLLEQILRQL 445
Query: 528 FFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS--DMKYFIKVLSLGGRNEGEEQK 585
FF P YP I + + +PD+ + PS K ++K + +K
Sbjct: 446 SFF-PSYPSEFNIEIT-KFKNLLFHPNRLPDMFLFPSYTKEKSYVKEI---------HKK 494
Query: 586 KCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
+C L + F+ IY H E
Sbjct: 495 LFICPYSIDLGNAQPCNFFSNIYIHPPSE 523
>gi|224102331|ref|XP_002312641.1| predicted protein [Populus trichocarpa]
gi|222852461|gb|EEE90008.1| predicted protein [Populus trichocarpa]
Length = 92
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 580 EGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSPEMMNASI 620
EGEEQ+K +C+NPG AKG+G GTFAE+ YHGSP+ MNASI
Sbjct: 23 EGEEQRKSICINPGTQAKGQGGGTFAELKYHGSPDKMNASI 63
>gi|302688247|ref|XP_003033803.1| hypothetical protein SCHCODRAFT_233383 [Schizophyllum commune H4-8]
gi|300107498|gb|EFI98900.1| hypothetical protein SCHCODRAFT_233383 [Schizophyllum commune H4-8]
Length = 877
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 126/333 (37%), Gaps = 65/333 (19%)
Query: 256 CCDGDGHLNDKSVLLQSSV-EHSGGQRVRLDLHKL--GEFSLFPGQVVGIEGSNPSGHCL 312
DG+ N S L+SS +R + + +LFPG +V + G N +G +
Sbjct: 293 AGDGNAETNGASQELESSTPSQKKSKRTPAPIVTIPGAPLALFPGAIVALRGRNGAGTFV 352
Query: 313 IASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEE------ISMIIAAGPFTT 366
LV P PS + + + P +M + AGP+T+
Sbjct: 353 AEEALVLPPLPPPPGYFPSIPSGLSSSTPSMTPSSSTPYPAPSTSSAPFTMAVFAGPYTS 412
Query: 367 TDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQ 426
+L F P + ++ + + +++LLGPF+DS HP IK G D +F L L+
Sbjct: 413 DSDLNFAPWQSALAALREEAVDVVVLLGPFLDSAHPLIKTGDADEPLHRMFLRRFLMPLR 472
Query: 427 DYVEY--------------------------------MGSE--VRAILVPSIRDA--NHD 450
++ +GS+ A+L+PS+RDA NH
Sbjct: 473 RWLNGVGPVGGATGGGGGGGASESAGGEDAGEGESKPLGSKGGRLALLIPSVRDALSNH- 531
Query: 451 FVLPQP------PFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEE-MSR 503
PQ FD +I L NP F N + + + + L E + R
Sbjct: 532 LTFPQAELAGFEAFD-------ERIRFLPNPARFAINGVSFAATSAETVFHLQAERLLKR 584
Query: 504 CSKDGTSNDRME-IYSLDISLMGPAFFFYPLYP 535
+ S D + +Y + + FYPL+P
Sbjct: 585 GAGPPESGDPVANLYRVMLEQRS----FYPLFP 613
>gi|193631895|ref|XP_001945319.1| PREDICTED: hypothetical protein LOC100168132 [Acyrthosiphon pisum]
Length = 562
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 129/620 (20%), Positives = 241/620 (38%), Gaps = 109/620 (17%)
Query: 8 EFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFM 67
EF+ G D+ ++ +C+ C + + SDLV SW Y + Q+D + + D + +
Sbjct: 9 EFEDMGMTIPDD--IIDECVIVCHAHKISASDLVGSWIAYCASSQIDSNDLSRDRLATLV 66
Query: 68 LHLQNEQKEAIIKEEPSLHIYSSKDVDMILNDEDENIAEDILGTPPDNLKLYSDALDSTY 127
+ + K + D +I+N S+
Sbjct: 67 KSFKVDDK------------LKANDKKLIVNK-------------------------SSL 89
Query: 128 KANANGYSSDKPSKLVTPFGRRTEKLVVKFNINNLPNTENGC--IEHDDENTEDDIIKRI 185
+A S PS L + G ++ +F ++++ + GC E + +T D+
Sbjct: 90 NESAPTQSVRSPSSLKSTHGTNIIQIENEFKVSDVID---GCDIKEENAISTAGDVTSNF 146
Query: 186 KTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALEN--RIRKHANALVSSGLYEEPTDPTV 243
G + + E C +D ++ N + H LV+ + + P V
Sbjct: 147 GLGN-VNKNDSSAKVETACLMKHDLWDNFIFGHVNYQKFDDHVQELVNDIVQKNDLKP-V 204
Query: 244 ASQRTLFAVGM--ICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE--FSLFPGQV 299
S L+ I G L K + L S H ++LDL + + SLF Q+
Sbjct: 205 TSLSGLYCGNNTEITISGSLRLIKKELFLDSL--HG---FIKLDLSEAEQPIKSLFVNQI 259
Query: 300 VGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMII 359
+ + G+N K LP+ + P + +++++
Sbjct: 260 LVVTGTNLDTKVFKVKKFYADASLPLSNKL---PDFSKG---------------NLNVMV 301
Query: 360 AAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHP-QIKKGTTD---SSFDE 415
AAGPF + + + + LK L+ + QLLIL GP D++ Q+ K T++ +DE
Sbjct: 302 AAGPFFSELSPHGKLLKSLVQKTIELEAQLLILFGPIFDADFGMQLNKTTSEDVQKCYDE 361
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPP-FDIQPPDII-HQITSLT 473
+ L+ L + + ++ +L S +D+ + P PP + P++ + I ++
Sbjct: 362 VLE-ATLKPL--FSNPVTQNIKLLLFSSWKDSENYAFYPTPPNTESSLPNLYPNNIYMVS 418
Query: 474 NPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPL 533
+P F N I + D L L +++ R E+++ + +P
Sbjct: 419 DPSVFSVNDIIIAGNASDSLMGLHVSAINQT--------REEMFTKLAKQIIWQRCLHPS 470
Query: 534 YPPAEGIPLDFSLAQEALTI-STIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
Y +P+D L E T+ P II+ S ++ FI+V+ EG C+ +N
Sbjct: 471 YVANPNVPVDHLLWLEHCTLQQNTPHIILTSSQLRTFIRVV------EG-----CMVINV 519
Query: 593 GRLAKGEG-----SGTFAEI 607
G+L K +GT+ +I
Sbjct: 520 GQLVKHNSQKQAVAGTYGQI 539
>gi|294925631|ref|XP_002778968.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887814|gb|EER10763.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 444
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 161/371 (43%), Gaps = 56/371 (15%)
Query: 247 RTLFAVGMICCDGDGHL---------NDKSVLLQ----SSVEHSG-GQRVRLDLHKLGEF 292
+ + VG +CC+ D +L N S+LL+ SG G+R+ L++ L +
Sbjct: 75 QAVLMVGRVCCEADENLQPVPEPLNLNAHSLLLEPIFTGGPGASGRGKRLILNVQALDSY 134
Query: 293 SLFPGQVVGIEGSNPSGHC---LIASKLVDQIPLPVDAVVDVHPSMKQALDQ-EIHSTVV 348
++FPG VVG+ G C L+A +V L S K + ++ I V
Sbjct: 135 TVFPGCVVGVIGRTSPNSCGGELLAEAMVTGAGL--------QWSRKTSGEEPAISLEVA 186
Query: 349 ISRPEEISMIIAAGPFTTTDN--LYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKK 406
+ I ++ A+GPF + + + L + Y +P +LIL+GP++D ++ +
Sbjct: 187 HADGAPIHVLSASGPFQSLKGKVMGGQRLDVITQYVSDIKPGVLILMGPYMDVDYMEATV 246
Query: 407 G---TTDSSFDEIFHLEILRRLQDYVEYMGSEVRA--ILVPSIRDANHDFVLPQP----- 456
T SF++ F+ EIL RL + E R +L+PS+ + + LPQP
Sbjct: 247 AEEVETPMSFEDTFNKEILPRLMK-LALTCRETRTHLVLLPSLNECCFPYPLPQPTLMAL 305
Query: 457 ----PFDIQPPDI--IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTS 510
P+ + + + NP + N + + + D L+ + E +++ + T
Sbjct: 306 KAYEPWATLAKHLEPLRHVRLGGNPCSIRINDMMLYVSSTDPLRSFTAEILTKSPEGKTK 365
Query: 511 ND-RMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS-LAQEALTISTIPDIIILPSDMKY 568
D +E + SL +PL P A +P+D + L L + DI++
Sbjct: 366 VDLALEQFVSHRSL-------FPLSPSA--LPVDPNRLRAGGLRMPDETDIVVGSLGEAM 416
Query: 569 FIKVLSLGGRN 579
+ +L+ GGR
Sbjct: 417 RVVMLNYGGRR 427
>gi|281204243|gb|EFA78439.1| hypothetical protein PPL_09091 [Polysphondylium pallidum PN500]
Length = 606
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 45/280 (16%)
Query: 269 LLQSSVEHSGGQRVRLDLHKL-GEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDA 327
LL + + G + +D K E +LF GQ+V +EG N G S + P +D
Sbjct: 297 LLSNRFQLLGHTQKGIDSFKFQKETALFSGQLVTVEGENIPGSNFGCSSVY--YPKQLDF 354
Query: 328 VVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQP 387
S + ++ + + ++ A+GPF+ + PL + + ++ Q
Sbjct: 355 Y---------------KSESLENQEKSVHIMFASGPFSLHHCFDYTPLDDFLKLVEKNQA 399
Query: 388 QLLILLGPFVDSEHPQIKKGTTDSSFDEIF-HLEILRRLQDYVEYMGSEVRAILVPSIRD 446
L+IL GPF+D H + +S D +F L L S + I+VPSI D
Sbjct: 400 NLVILFGPFIDEGHDMAQFQNDESLLDTLFAKLGAL-----------SATQFIVVPSIHD 448
Query: 447 ANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQ-IKVGCCTVDVLKQLSGEEMSRCS 505
N +++ PQPP + + + ++NP T N +G D++ + + SR +
Sbjct: 449 INSEYIFPQPP--LPSSRKYNNVQFVSNPSTLLVNNSFTIGLNNTDIVGDIQ-RKTSRFN 505
Query: 506 KDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPLDFS 545
+ +M I + +YPL+P IP++ +
Sbjct: 506 LNNKDICKMIIQQQN---------YYPLHPSE--IPIEMA 534
>gi|156100053|ref|XP_001615754.1| DNA polymerase alpha subunit [Plasmodium vivax Sal-1]
gi|148804628|gb|EDL46027.1| DNA polymerase alpha subunit, putative [Plasmodium vivax]
Length = 547
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 145/341 (42%), Gaps = 38/341 (11%)
Query: 250 FAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPS 308
+ G I D + ++++ +++L+ ++ + G + +L +L+ + F GQ++ I+G
Sbjct: 158 YIFGRIYTDNEINISESNIILEGNLNLNNGDKAQLLNLNHIKNICCFLGQILAIKGKKEI 217
Query: 309 GHCLIASKLVDQIP--LPVDAVVDVHPS---MKQALDQEI------------HSTVVISR 351
I V+ I LP V + + +K EI S V+
Sbjct: 218 NQYSIKY-YVNNIYAGLPTHLNVKLENTAFLLKHFNGNEIEEDNKCEEEKSDQSKVLQLY 276
Query: 352 PEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD----SEHPQIKKG 407
++ I+ + TDN Y + L + K P ++++ GPF+ SE Q K G
Sbjct: 277 NDDNIHIMVCNGYVYTDNEYSDNLDNFLKIVNEKLPHVVLIFGPFLYIRNFSETIQ-KIG 335
Query: 408 TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI-I 466
+ ++ IF I + +E + ++PSI D+ + + LPQPPF + +
Sbjct: 336 DINVIYENIFKKIIKLAKSEPLE----KTHFFIIPSIYDSVNVYPLPQPPFSYENNFANL 391
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
+ L+NP N++K+ + DV+ LS + R S+ M+ + L ++
Sbjct: 392 ANVHFLSNPSYIYINELKIALTSCDVIYNLSKNLLCRPSE-------MKAFYLFEQILRQ 444
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMK 567
FF P YP I + + +PD+ + PS K
Sbjct: 445 LSFF-PSYPSEFNIEIT-KFKNLLFHPNRLPDMFLFPSYTK 483
>gi|145494302|ref|XP_001433145.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400262|emb|CAK65748.1| unnamed protein product [Paramecium tetraurelia]
Length = 481
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 166/394 (42%), Gaps = 75/394 (19%)
Query: 236 EEPTDPTVA----SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGE 291
E PTD T + +Q+ L + D KS+ LQS +E+ G
Sbjct: 129 EVPTDQTQSDTQSTQKLLKSDKSFFLDFKDDQKPKSLNLQS-IENEGA------------ 175
Query: 292 FSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQE---IHSTVV 348
L+PG++VG+ + S+ DQ L V + ++P QA+ +E +
Sbjct: 176 -YLYPGKIVGV----------VISQSTDQ-ELEVRRFLSIYPD-DQAIQEEPSNFKNYQA 222
Query: 349 ISRPEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQ--LLILLGPFVDSEHPQIKK 406
R + I M+IAAGPF D ++ L L+ K+KQ +L+LLGP +D ++ Q
Sbjct: 223 QQRSDSIVMVIAAGPFEKEDKFGYKGLFALVEKIKKKQISCDILMLLGPILDIKN-QENL 281
Query: 407 GTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDI----QP 462
+ ++E F + IL+ + + + V+ I+V S ++ +PQPP +I Q
Sbjct: 282 DKYNYEYEEFFEI-ILQAIMEEI----PRVQVIVVNSTKEITSFHPVPQPPINIKVEQQK 336
Query: 463 PDI-IHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDI 521
+ + + + NP + + +G +V+ +++ S K G ++ +
Sbjct: 337 KKVQVDNLMFVGNPCILQVEDMTIGIINEEVVSEIN----SASEKIGVQ--KLNKIEAAL 390
Query: 522 SLMGPAFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS---------DMKYFIK- 571
+ F P+ P P D + QE L PD+II PS D FI
Sbjct: 391 KQIIEQRSFVPINPTK--FPCDLT-KQEFLDFDQCPDVIITPSHFTQSAKLIDQTVFINP 447
Query: 572 ----------VLSLGGRNEGEEQKKCVCVNPGRL 595
+L+ G NE E K + V+ G+L
Sbjct: 448 QFFQPAQQYAILTFNGNNELEVIPKKLRVDFGKL 481
>gi|331249355|ref|XP_003337295.1| hypothetical protein PGTG_18794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316285|gb|EFP92876.1| hypothetical protein PGTG_18794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 129 ANANGYSSDKPSKLVTPFGRRTEKLVVKFNIN-NLPNTENGCIEHDDENTEDDIIKRIKT 187
++ G S KPS+L F R E+ + ++N +LP+ + TE + +
Sbjct: 43 SSTAGTRSLKPSELRATFVNRLERFKILESLNTHLPSASS--------PTEPSKPRSLPL 94
Query: 188 GKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQR 247
K H + + R+MY++ DR + L+ + + A + EE DP+V SQ
Sbjct: 95 --KFDFTKHKNPEKFQYRYMYEKLSDRSDVLDRLLEEAAMTISDWYEIEEWADPSVISQE 152
Query: 248 TLFAVGMICCDG-DGHLNDKSVLLQSSVEHSGGQRVRLD------LHKLGE----FSLFP 296
++A G IC + D ++D++ L++S G+R+RL +H +G LFP
Sbjct: 153 DIWAYGRICAETQDSKISDQACWLETSRMIGHGRRIRLQWADDLKVHGVGSQEEGIGLFP 212
Query: 297 GQVVGIEGSNPSG 309
G +VG+ G N G
Sbjct: 213 GAIVGLRGRNGGG 225
>gi|429962586|gb|ELA42130.1| hypothetical protein VICG_00771 [Vittaforma corneae ATCC 50505]
Length = 388
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 163/417 (39%), Gaps = 88/417 (21%)
Query: 185 IKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVA 244
+K KKC+L + PE G ++Y + D+ + + +R+ + + S E
Sbjct: 12 VKPNKKCTLKL--VKPE-GTSYLYLKPADKASYIHSRLLQMKPLFLESLQISEFKPINYQ 68
Query: 245 SQRTLFAVGMICCDGDGHL----------NDKSVLLQSSVEHSGGQRVRLDLHKLGEFSL 294
S + + GMI + D V +S ++S V+LDL L +SL
Sbjct: 69 SIKPFYTFGMISSSTGSKISSEDIVSAIPTDPLVFAFNSTDNSNVS-VKLDLSALDSYSL 127
Query: 295 FPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPE- 353
F GQVV ++G+N G ++ + I+ST ++ +
Sbjct: 128 FNGQVVAVKGTNTRGDSILV--------------------------ESIYSTPGLTEYKS 161
Query: 354 ---EISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTD 410
EI+ +I+ GPF+ D E + +L + I GPF + + K +
Sbjct: 162 VRGEIAAVISKGPFSYAD---LESIFKL-------ESDPFIFFGPFCGTNESEFKTLSEF 211
Query: 411 SSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQIT 470
EIF +R+LQ V+ I+VPS+ D V PQP I +IT
Sbjct: 212 VDSLEIF----IRKLQ--------SVKVIIVPSLDDYCSVRVYPQPAIKISN----ERIT 255
Query: 471 SLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR---CSKDGT-SNDRMEIYSLDISLMGP 526
SL NP N + D L EE+S+ S+D S DR++ S +
Sbjct: 256 SLPNPSYILLNNHLILLSNFDSFIDLCYEEISKEPSKSEDVLFSGDRIQRLSYHLVFQQS 315
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYF------IKVLSLGG 577
F P+ + L +S PD+ ++ S +K F + V + GG
Sbjct: 316 ---FVPVLNSKSNVAFG-----SWLKMSYSPDLYVISSKIKSFDRCVGPVTVFNTGG 364
>gi|89632612|gb|ABD77538.1| DNA-directed polymerase alpha [Ictalurus punctatus]
Length = 123
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 533 LYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNP 592
L+PPAE + +D+ Q+ + PDI+++PS+++YFIK + CVC+NP
Sbjct: 43 LHPPAEEVNMDYERFQQYGQLPLTPDILLVPSELRYFIK-----------DVIGCVCINP 91
Query: 593 GRLAKGEGSGTFAEIYYHGSP 613
RL KG+ GT+ + +P
Sbjct: 92 ARLTKGQVGGTYGRLLIQQNP 112
>gi|241123071|ref|XP_002403775.1| DNA polymerase alpha 70 kD subunit, putative [Ixodes scapularis]
gi|215493525|gb|EEC03166.1| DNA polymerase alpha 70 kD subunit, putative [Ixodes scapularis]
Length = 273
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 250 FAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSG 309
F G + CD G +N S++L+ S + S G V+L+L +L +FS+FPGQV+ +G+N +G
Sbjct: 107 FVTGRVLCDSSGKINANSLILEGS-KSSYGHSVKLNLSRLKQFSVFPGQVIVAKGANANG 165
Query: 310 HCLIASKLVDQI-PLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIA 360
L+ +L+++I +P V+D++ + A +I ++ EE+S+ +A
Sbjct: 166 QNLVLEELLERIHCVPDPCVLDINGVVVGATGVDI---LLHMGKEELSLYVA 214
>gi|224111318|ref|XP_002315813.1| predicted protein [Populus trichocarpa]
gi|222864853|gb|EEF01984.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
Query: 563 PSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGEGSGTFAEIYYHGSP 613
P ++ +VLSLG EGEE++KC+C+NPGR+AKG G G+F E+ Y GSP
Sbjct: 126 PLNVCSLAQVLSLG---EGEERRKCICINPGRMAKG-GGGSFDELNYQGSP 172
>gi|380804257|gb|AFE74004.1| DNA polymerase alpha subunit B, partial [Macaca mulatta]
Length = 169
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%)
Query: 205 RFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDGHLN 264
+ M+ + D L +I + + L E T +Q + +G I CD +G LN
Sbjct: 75 KSMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLN 134
Query: 265 DKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQV 299
+KSV+L+ EHS G ++ +DL +L E+SLFPGQV
Sbjct: 135 NKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQV 169
>gi|269860578|ref|XP_002650009.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Enterocytozoon bieneusi H348]
gi|220066560|gb|EED44037.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Enterocytozoon bieneusi H348]
Length = 373
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 161/401 (40%), Gaps = 67/401 (16%)
Query: 176 NTEDDIIKRIKTGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLY 235
N +D + K+I K + ++ E + Y + D N L R+ L L
Sbjct: 3 NLKDIVFKKISKDKTNANIIINGLEE--VEYFYLKNTDMRNYLTERLI-FMEGLFLELLK 59
Query: 236 EEPTDPTVASQRTLF-AVGMICCDGDGHLNDKSVLLQSSVEHSGGQ---RVRLDLHKLGE 291
++ D + F G I L ++ +Q+ + + V+ +L++L +
Sbjct: 60 KDKFDSIYSKNPNPFLTFGAITSIRGEKLTANTIYIQNPLFETNNNIDTLVKCNLNELEQ 119
Query: 292 FSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISR 351
FS+F GQ+V + S + +I + P P+ ++V+ K LD
Sbjct: 120 FSIFNGQIVALNCSYKNNSLIIH----NLYPFPL---LEVNSRKKNNLD----------- 161
Query: 352 PEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDS 411
++IA G F + E + +LI P ++IL+GPF T S
Sbjct: 162 -----IVIAKGYFNS------EYIDQLILL----NPNVIILMGPF-----------QTIS 195
Query: 412 SFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITS 471
+F +L L+ + ++Y ++ IL+PS+ D + PQ ++ + QI
Sbjct: 196 AFKSFVNL--LKEKLETIKY----IKVILIPSLEDKEFIGIFPQ----MEKTILSEQIIC 245
Query: 472 LTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFY 531
NP + N + D+L + E ++ ++ ND+ I S I + F
Sbjct: 246 TRNPSSIIINNHLLAFNNCDILSDIENYEYTKINE--LCNDKF-INSSKIDRLCHHLLFQ 302
Query: 532 PLYPPAEGIPLDFSLA-QEALTISTIPDIIILPSDMKYFIK 571
+ P IP F +A + L I IPDI ++ S FIK
Sbjct: 303 CSFLPT--IPSQFYVAYSKTLNILQIPDIYVISSKFDIFIK 341
>gi|156087889|ref|XP_001611351.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798605|gb|EDO07783.1| conserved hypothetical protein [Babesia bovis]
Length = 561
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 136/343 (39%), Gaps = 54/343 (15%)
Query: 253 GMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGS---NPS 308
G I +GD ++ +V +Q + G + ++ ++H + LFPGQ+ + G +
Sbjct: 192 GRIGSEGDVPIDALNVTIQGTRVFDYGVKAQVTNVHSMDNVCLFPGQMAALTGKCFEDEF 251
Query: 309 GHCLIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD 368
G +ASK+ IP P P Q E + + + G T
Sbjct: 252 GVRYVASKIHCGIPAP-------EPVYPNYTSQRFQG-------ENVHISVVRGCLLTET 297
Query: 369 NLYFEPLK--ELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQ 426
EP+ + S KR +P ++ ++GPFV S G S +I + I +R
Sbjct: 298 ---LEPVNFAHVFSKIKRDRPHIVFIMGPFV-SVRQMAADGEGLSRIGDIVY--IYKRFF 351
Query: 427 DYVEYMG-----SEVRAILVPSIRDANHDFVLPQPPFDIQPP-----DIIHQITSLTNPG 476
+ + R +VP D F LPQPP D D ++ L+NP
Sbjct: 352 HEIAILAEVNQLKATRFFVVPHCYDVLSGFPLPQPPLDAAGSLFNDIDYPENVSFLSNPA 411
Query: 477 TFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM-EIYSLDISLMGPAFFFYPLYP 535
N I + + D + ++ + C + R+ E L S FYP Y
Sbjct: 412 YVRVNGILIAVTSCDPISGIANNMV--CIPNEHRTRRVCEQLLLQRS-------FYPGY- 461
Query: 536 PAEGIPLDFSLAQEAL-----TISTIPDIIILP--SDMKYFIK 571
PA +P ++++ + + T TIPD+ + SD + F++
Sbjct: 462 PASMLPAEYAVDHDMIKYLEFTEETIPDLFLFAGVSDSEPFVE 504
>gi|300120189|emb|CBK19743.2| unnamed protein product [Blastocystis hominis]
Length = 335
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 24/140 (17%)
Query: 261 GHLNDKSVLLQSSVEHS------GGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIA 314
+ D V+L S+ S RV L L + F+LFPG +VG+EG+ + +
Sbjct: 121 ASIRDSDVVLYVSLAPSVKTQDENESRVSLLLGSIPSFTLFPGAIVGVEGTM-NNRIISV 179
Query: 315 SKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTDNLYFEP 374
+ L PL + + L + S E +S+ +A GPF+ D+ FEP
Sbjct: 180 THLYSGFPL----------NPPKTLPASLAS-------ETVSLWVARGPFSCRDDGDFEP 222
Query: 375 LKELISYAKRKQPQLLILLG 394
LK ++ AK+++P +L+L+
Sbjct: 223 LKTFLALAKKEKPSVLLLVA 242
>gi|402467694|gb|EJW02953.1| hypothetical protein EDEG_02659 [Edhazardia aedis USNM 41457]
Length = 208
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 245 SQRTLFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEG 304
S+++ + G+I G+ L V + S+V+ S +RLDL L +S+FPG++V I G
Sbjct: 72 SEKSFYTFGIITSIGEQKLAPNKVFITSNVDSSNDVLIRLDLQYLKRYSVFPGEIVAIYG 131
Query: 305 SNPSGHCLIASKLVDQIPLPVDAV 328
N G+ +I ++ L ++V
Sbjct: 132 KNIQGNEIIVEQIWSMSQLSFNSV 155
>gi|399218427|emb|CCF75314.1| unnamed protein product [Babesia microti strain RI]
Length = 567
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 133/321 (41%), Gaps = 30/321 (9%)
Query: 197 GSGPEPGCRFMYDRTEDRFNALENRIRKHANA-LVSSGLYEEPTDPTVASQRTLFAVGMI 255
GS PE + RF L + + AN + ++E + + Q L G I
Sbjct: 136 GSSPE-NIAMQINNKIARFQNLFIKFARKANKDFQITPVHESASVIQLIKQNDLCVYGRI 194
Query: 256 CCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGS---NPSGHC 311
C+ + +N+ ++L++ +S G+ ++ ++ + LFPGQ+V I+G+ +
Sbjct: 195 WCESEIQINEHNILIEGDYSNSKGKIAQVRNIENMPCICLFPGQMVAIKGNAIQDDFSFR 254
Query: 312 LIASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTT--DN 369
+AS + IP ++ L T ++ E + +++ T D
Sbjct: 255 YMASNIYTGIP------------AERPLLHRPKETSLMYGGENVHIMVVRSLLITENGDK 302
Query: 370 LYFEPLKELISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEI-FHLEILRRLQDY 428
+ F + + I K + P L+I +GPFV + + D I + + + +
Sbjct: 303 VDFNGVFKKI---KDEAPHLVIFMGPFVSARIISFQSQNFKELGDLISIYYKFIEEINTL 359
Query: 429 VEYMGSE-VRAILVPSIRDANHDFVLPQPPFDIQPPDIIHQITS-----LTNPGTFEANQ 482
+ ++ + +L+ D LPQPP + + + + ITS L NPG N+
Sbjct: 360 SLHSNTKNTKFVLISHSYDLCSTHPLPQPPLNSKSTALANLITSDNLIYLPNPGYLRVNE 419
Query: 483 IKVGCCTVDVLKQLSGEEMSR 503
+ +G + D + +S + R
Sbjct: 420 VIIGITSCDPITSISRNMVCR 440
>gi|164662651|ref|XP_001732447.1| hypothetical protein MGL_0222 [Malassezia globosa CBS 7966]
gi|159106350|gb|EDP45233.1| hypothetical protein MGL_0222 [Malassezia globosa CBS 7966]
Length = 254
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 33/164 (20%)
Query: 187 TGKKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSS-GLYEEPTDPTVAS 245
T + +L V + R+M+++ +R L+ R+ + + + + GL ++ DPT+ S
Sbjct: 61 TAPRVALAVSTDLKQWNYRYMFEKKGERSLELDTRLGEMGDVIQQAFGLSKDWDDPTIPS 120
Query: 246 QRTLFAVGMICC-------------DGDG----HLNDKSVLLQSSVEHSGGQRVRL---- 284
Q +++ VG IC D DG L +++L++S GQRV L
Sbjct: 121 QESVYTVGRICARLDPPSMRGKSSVDADGPSSLKLTMSNLMLETSRMVGNGQRVPLVIDA 180
Query: 285 --DLHKLGE---------FSLFPGQVVGIEGSNPSGHCLIASKL 317
+H LFPG +VG++G N SGH +A +L
Sbjct: 181 KCRIHYAWTDATAQASNVLGLFPGMIVGMKGRNGSGHRFVAEEL 224
>gi|238611749|ref|XP_002398047.1| hypothetical protein MPER_01418 [Moniliophthora perniciosa FA553]
gi|215473774|gb|EEB98977.1| hypothetical protein MPER_01418 [Moniliophthora perniciosa FA553]
Length = 144
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 394 GPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRD--ANHDF 451
GPF+DS HP I+ G TD + +FH L L+ +++ + AIL+PS+ D ++H
Sbjct: 2 GPFIDSSHPLIQAGDTDETPLALFHRVFLDPLRLFLDTSPGSI-AILIPSVEDLISSHA- 59
Query: 452 VLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEM 501
V PQ F ++ I L NP F N + +VDVL L EE+
Sbjct: 60 VFPQREFGLEVTRADPCIHLLPNPTHFSINGVTFASTSVDVLFHLRKEEV 109
>gi|389585220|dbj|GAB67951.1| DNA polymerase alpha subunit [Plasmodium cynomolgi strain B]
Length = 539
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 158/390 (40%), Gaps = 57/390 (14%)
Query: 250 FAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPS 308
+ G I D + ++++ +++L+ + + G + +L +L+ + F GQ++ I+G
Sbjct: 158 YIFGRIYTDSEINISESNIILEGDLNLNNGDKAQLLNLNHIKNICCFLGQILAIKGKKEI 217
Query: 309 GHCLI---ASKLVDQIPLPVDAVVDVHPSMKQALD-QEI-------------HSTVVISR 351
I S + +P ++ ++ + + + EI + + +
Sbjct: 218 NQYSIKYYVSNIYAGLPTHLNIKLENTAFLLKHFNGNEIEEDNKCEEEKSDQNKVLQLYN 277
Query: 352 PEEISMIIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPFVD----SEHPQIKKG 407
+ I +++ G + DN Y + L + K P ++++ GPF+ SE Q K G
Sbjct: 278 DDNIHIMVCNG-YVYADNEYSDNLDNFLKIVNEKLPHVVLIFGPFLYIRNFSETIQ-KIG 335
Query: 408 TTDSSFDEIFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDI-I 466
+ ++ IF I + +E + ++PSI D+ PPF + +
Sbjct: 336 DINVIYENIFKKIIKLAKSELLE----KTHFFIIPSIYDS--------PPFFYENSYANL 383
Query: 467 HQITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGP 526
+ L+NP N++K+ + DV+ LS + R S+ M+ + L ++
Sbjct: 384 SNVHFLSNPSYIYINELKIALTSCDVIYNLSKNLLCRPSE-------MKAFYLFEQILRQ 436
Query: 527 AFFFYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPS--DMKYFIKVLSLGGRNEGEEQ 584
FF P YP I + + +PD+ + PS K ++K + +
Sbjct: 437 LSFF-PSYPSEFNIEIT-KFKNLLFHPNRLPDMFLFPSYTKEKSYVKEI---------HK 485
Query: 585 KKCVCVNPGRLAKGEGSGTFAEIYYHGSPE 614
K +C L+ + F+ IY H E
Sbjct: 486 KLFICPYSIDLSNAQPCNFFSNIYIHPPAE 515
>gi|440493809|gb|ELQ76235.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Trachipleistophora hominis]
Length = 483
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 67/344 (19%)
Query: 266 KSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPSGHCLIASKLVDQIPLPV 325
+ V + ++ + S V L+L ++ +SLFPGQVV I G N +G+ +I ++ D LPV
Sbjct: 122 EKVFVFNNTDESNDTLVELNLSEMDRYSLFPGQVVAIRGRNLNGNEIIVQEIYDSPVLPV 181
Query: 326 DAVVDVHPSMKQALDQEIHSTVVISRPEEISMIIAAGPFTTTD--NLYFEPLKELISYAK 383
+ + L S IS P + + +TD + F L +++
Sbjct: 182 NFFDE--GDRGNNLKDNNFSVCFISGP--FNNNVKPDEINSTDIYDRLFLSLDSIMTI-- 235
Query: 384 RKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEIFHLEILRRLQD-YVEYMGSEV------ 436
L++LGPF++S +S D L R++D ++ M + +
Sbjct: 236 --DASYLVVLGPFIESRF-------LNSCLD-------LERVKDIFMAKMNTWINKKPFR 279
Query: 437 RAILVPSIRDANHDFVLPQPPFDI-QPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQ 495
+ I VPS D + + P D Q I+ L+NP F + CT D+L
Sbjct: 280 KIITVPSTEDVHTLGMYPCASIDDGQNASFIN----LSNPTQFYIGDVLFSVCTYDILLH 335
Query: 496 LSGEEMSRCSKDGTSNDRMEI-YSLD-ISLMGPAFF------------------------ 529
+S E+ + S EI + LD I + P
Sbjct: 336 MSSTEIFFDINENVSLPESEISHRLDNIPKINPNSLDSCTPKVPKKSKRIERLSAHMIYQ 395
Query: 530 --FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIK 571
F P +PP + ++ E ++ PD I+ S +K FI+
Sbjct: 396 RSFLPCFPPRNIVSIN---RPECFDMNIAPDFFIISSKLKTFIQ 436
>gi|294891172|ref|XP_002773456.1| hypothetical protein Pmar_PMAR027912 [Perkinsus marinus ATCC 50983]
gi|239878609|gb|EER05272.1| hypothetical protein Pmar_PMAR027912 [Perkinsus marinus ATCC 50983]
Length = 233
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 35/206 (16%)
Query: 247 RTLFAVGMICCDGDGHL---------NDKSVLLQ---SSVEHSG------GQRVRLDLHK 288
+ + VG +CC+ D +L N S+LL+ + V G G+R+ L++
Sbjct: 22 QAVLMVGRVCCEADENLQPVPESLNLNAHSLLLEPIFTGVLPGGPGASGRGKRLILNVQA 81
Query: 289 LGEFSLFPGQVVGIEGSNPSGHC---LIASKLVDQIPLPVDAVVDVHPSMKQALDQ-EIH 344
L +++FPG VVG+ G C L+A +V L S K + ++ I
Sbjct: 82 LDSYTVFPGCVVGVIGRTSPNSCGGELLAEAMVTGAGL--------QWSRKTSGEEPAIS 133
Query: 345 STVVISRPEEISMIIAAGPFTTTDN--LYFEPLKELISYAKRKQPQLLILLGPFVDSEHP 402
V + I ++ A+GPF + + + L + Y +P +LIL+GP++D ++
Sbjct: 134 LEVAHADGAPIHVLSASGPFQSLKGKVMGGQRLDVITQYVSDIKPGVLILMGPYMDVDYM 193
Query: 403 QIKKG---TTDSSFDEIFHLEILRRL 425
+ T SF++ F+ EIL RL
Sbjct: 194 EATVAEEVETPMSFEDTFNKEILPRL 219
>gi|422293484|gb|EKU20784.1| DNA polymerase alpha subunit B, partial [Nannochloropsis gaditana
CCMP526]
Length = 223
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 22/148 (14%)
Query: 468 QITSLTNPGTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPA 527
++ L+NP F N++ VG T D+L LSG+E+S G R+ + L
Sbjct: 72 RLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQ----- 124
Query: 528 FFFYPLY-PPAEG-IPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQK 585
F+PL+ PPA+G LD A + + PD+++LPS + F+K +GG
Sbjct: 125 -SFFPLFPPPADGQAQLDLRHA-DHWRMPITPDVLLLPSKLTPFVK--DVGG-------- 172
Query: 586 KCVCVNPGRLAKGEGSGTFAEIYYHGSP 613
+C+NPG L KG G GT+A ++ H P
Sbjct: 173 -ALCINPGTLTKGGGGGTYAMLHIHPLP 199
>gi|331249357|ref|XP_003337296.1| hypothetical protein PGTG_18795 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316286|gb|EFP92877.1| hypothetical protein PGTG_18795 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 192
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 416 IFHLEILRRLQDYVEYMGSEVRAILVPSIRDANHDFV-LPQPPFDIQPPDII---HQITS 471
IF +I RL V IL+PS RD V PQ +I+ P++ I
Sbjct: 5 IFREKISSRLHKLVAS-SPRTHVILIPSPRDLLASQVDYPQAALNIKDPELGLFGRNIVC 63
Query: 472 LTNPGTFEANQIKVGCCTVDVLKQLSGEEMSR---------CSKDGTSNDRMEIYSLDIS 522
L NP N++ +G VDVL L EE + +++GT + +
Sbjct: 64 LPNPSIISINEVIIGINNVDVLMPLKKEEFFKQATVVVDEETAQEGTDPNATNVICRACR 123
Query: 523 LMGPAFFFYPLYPPAEGIPLD-FSLAQEALTI----STIPDIIILPSDMKYFIK 571
+ FYPL+P A GI +D +L L + + DI+ILP++ F+K
Sbjct: 124 HVMRQRSFYPLFPHAIGIGMDAINLDVTHLDLLKHDTVGADILILPTNFTAFVK 177
>gi|300120188|emb|CBK19742.2| unnamed protein product [Blastocystis hominis]
Length = 150
Score = 46.2 bits (108), Expect = 0.051, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 530 FYPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVC 589
YPLYP + IPLD +L++ +PD++I+ ++ F+K E VC
Sbjct: 25 LYPLYP-SLSIPLDAG-KLPSLSMKEVPDLMIVATEKMRFVK-----------EVSGVVC 71
Query: 590 VNPGRLAKGEGSGTFAEI 607
++PG LA G GTFA +
Sbjct: 72 LSPGSLAFGNSGGTFARV 89
>gi|221488004|gb|EEE26218.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221508526|gb|EEE34095.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 703
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 378 LISYAKRKQPQLLILLGPFVDSE--------HPQIKKGTTDSSFD-EIFHLEILRRLQDY 428
L+ + + P +LIL GP V + P G D + F ++ RL
Sbjct: 402 LLDRVREEVPHILILFGPIVPASALISLSVSSPAAVAGLPDVDWTYTAFFRQVASRL--- 458
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ----------PPDIIHQITSLTNPGTF 478
G+ R +VPS D H LPQPP+ P QI+ L NP
Sbjct: 459 ---AGTRTRVFVVPSTADVAHPHPLPQPPYSSDLVSSDPFIGLPASARQQISFLPNPCFL 515
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF-------Y 531
N++++ D L ++ G +++ S G+ D I + SL+ F
Sbjct: 516 YVNELRLLVTAEDPLMEI-GAQVAYPSCIGSHQDL--IAACCSSLLRQRTLFPSGASSTL 572
Query: 532 PLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
P+ P P F +A++ +IP I++ PSD ++ G + +Q C+
Sbjct: 573 PVD-PKRFPPRMFDVAEDGE--DSIPHIVVFPSDA-------NVSGGTDPSQQGAFACIA 622
Query: 592 PGRL 595
RL
Sbjct: 623 DERL 626
>gi|237832511|ref|XP_002365553.1| DNA polymerase alpha subunit, putative [Toxoplasma gondii ME49]
gi|211963217|gb|EEA98412.1| DNA polymerase alpha subunit, putative [Toxoplasma gondii ME49]
Length = 703
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 378 LISYAKRKQPQLLILLGPFVDSE--------HPQIKKGTTDSSFD-EIFHLEILRRLQDY 428
L+ + + P +LIL GP V + P G D + F ++ RL
Sbjct: 402 LLDRVREEVPHILILFGPIVPASALISLSVSSPAAVAGLPDVDWTYTAFFRQVASRL--- 458
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQ----------PPDIIHQITSLTNPGTF 478
G+ R +VPS D H LPQPP+ P QI+ L NP
Sbjct: 459 ---AGTRTRVFVVPSTADVAHPHPLPQPPYSSDLVSSDPFIGLPASARQQISFLPNPCFL 515
Query: 479 EANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFF-------Y 531
N++++ D L ++ G +++ S G+ D I + SL+ F
Sbjct: 516 YVNELRLLVTAEDPLMEI-GAQVAYPSCIGSHQDL--IAACCSSLLRQRTLFPSGASSTL 572
Query: 532 PLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVN 591
P+ P P F +A++ +IP I++ PSD ++ G + +Q C+
Sbjct: 573 PVD-PKRFPPRMFDVAEDGE--DSIPHIVVFPSDA-------NVSGGTDPSQQGAFACIA 622
Query: 592 PGRL 595
RL
Sbjct: 623 DERL 626
>gi|401409153|ref|XP_003884025.1| putative DNA polymerase alpha subunit [Neospora caninum Liverpool]
gi|325118442|emb|CBZ53993.1| putative DNA polymerase alpha subunit [Neospora caninum Liverpool]
Length = 697
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 47/245 (19%)
Query: 378 LISYAKRKQPQLLILLGPFVDSEHPQIKKGTTDSSFDEI---------FHLEILRRLQDY 428
L++ + + P +LIL GP V S +T ++ + F ++ RL
Sbjct: 397 LLNRVREEAPHILILFGPIVPSSALISLSVSTPAAVATLPDVDWTYTSFFRQVSSRL--- 453
Query: 429 VEYMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDII-------------HQITSLTNP 475
G+ R +VPS D H LPQPP+ PD++ QI+ L NP
Sbjct: 454 ---AGTRTRVFVVPSTADVAHPHPLPQPPYS---PDLVSSDPFTGLSASARQQISFLPNP 507
Query: 476 GTFEANQIKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRM-----EIYSLDISLMGPAFFF 530
N++++ + D L ++ G +++ G+ D + G A
Sbjct: 508 CFLYVNELRLLVTSEDPLMEI-GAQLAYPHCIGSHQDLITACCSSFLRQRTLFPGGASST 566
Query: 531 YPLYPPAEGIPLDFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCV 590
P+ P P F + ++ P I+I PSD +S G + +Q C C
Sbjct: 567 LPM-DPKRFPPRMFETTEHGEDLA--PHIVIFPSDAN-----ISAG--TDASQQGACACF 616
Query: 591 NPGRL 595
RL
Sbjct: 617 TDDRL 621
>gi|82540402|ref|XP_724522.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479190|gb|EAA16087.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 303
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 253 GMICCDGDGHLNDKSVLLQSSVEHSGGQRVRL-DLHKLGEFSLFPGQVVGIEGSNPSGHC 311
G I D + ++++ +++L+ ++ ++ G + +L +L + F GQ++ I+G
Sbjct: 10 GRIYTDNEINISESNIILEGNINYNNGDKAQLLNLSSMKNLCFFLGQILAIKGKKEINQY 69
Query: 312 LI---ASKLVDQIPLPVDAVVDVHPSMKQALDQEIHSTVV-----------ISRPEEISM 357
I S + +P + +D +K QEI + + + + I +
Sbjct: 70 SIKYYVSSIYAGLPTHLKVKIDNDILLKHFNCQEIENDIKYEELDNDQILQMYNNDNIHI 129
Query: 358 IIAAGPFTTTDNLYFEPLKELISYAKRKQPQLLILLGPF--VDSEHPQIKK-GTTDSSFD 414
++ G + DN Y + + K P ++++ GPF + + + I+K G + +D
Sbjct: 130 MVCNG-YVYKDNDYSDYFDIFLKIVNEKLPHVVLIFGPFLYIRNFNEAIQKIGDINVIYD 188
Query: 415 EIF 417
IF
Sbjct: 189 NIF 191
>gi|261884359|ref|ZP_06008398.1| hypothetical protein CfetvA_03660 [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 157
Score = 40.0 bits (92), Expect = 3.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 39/63 (61%)
Query: 31 INYNLKPSDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSS 90
+ ++L +DL +E Y L +Q DE ++ D++ + +L++E K +++ + +L IYSS
Sbjct: 25 VTFSLVCADLFIKFETYSLKKQNDEKQIRYDKIFAQISNLKSEMKTLMVQRDAALDIYSS 84
Query: 91 KDV 93
++
Sbjct: 85 NNI 87
>gi|125977344|ref|XP_001352705.1| GA10347 [Drosophila pseudoobscura pseudoobscura]
gi|54641454|gb|EAL30204.1| GA10347 [Drosophila pseudoobscura pseudoobscura]
Length = 525
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 90/237 (37%), Gaps = 45/237 (18%)
Query: 373 EPLKELISYAKRKQPQLLILLGPFVDS--EHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
E L++L PQ ++L+GPF S H ++++ HL+ L L E
Sbjct: 301 EKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRQ-----------HLDALGGLAAGCE 349
Query: 431 YMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIH--------QITSLTNPGTFEANQ 482
+ + ILVPS D +LP+ P P+ + + TNP +
Sbjct: 350 QLKKQTDLILVPSTEDPTAPNILPRAPI----PECLAAGLLKAWPRTQLATNPCRLQYCT 405
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPL 542
++ C +D++ + + + TS +S I G P++P A +
Sbjct: 406 QQIVVCRLDLMAKFCRNTLH--FPEDTSQIEQH-FSRTIVCQG---HLVPIHPIAMPVHW 459
Query: 543 DFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
D+ AL + +PD+I++ + F Q C +N G K +
Sbjct: 460 DYD---PALWLYPLPDLIVMGDSCQSF-----------SSTQHGCTVLNTGSFVKSK 502
>gi|195174444|ref|XP_002027984.1| GL21402 [Drosophila persimilis]
gi|194115694|gb|EDW37737.1| GL21402 [Drosophila persimilis]
Length = 525
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 45/237 (18%)
Query: 373 EPLKELISYAKRKQPQLLILLGPFVDS--EHPQIKKGTTDSSFDEIFHLEILRRLQDYVE 430
E L++L PQ ++L+GPF S H ++++ HL+ L L E
Sbjct: 301 EKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRQ-----------HLDALGGLAAGCE 349
Query: 431 YMGSEVRAILVPSIRDANHDFVLPQPPFDIQPPDIIH--------QITSLTNPGTFEANQ 482
+ + ILVPS D + +LP+ P P+ + + TNP +
Sbjct: 350 QLKKQTDLILVPSTEDPSAPNILPRAPI----PECLAAGLLKAWPRTQLATNPCRLQYCT 405
Query: 483 IKVGCCTVDVLKQLSGEEMSRCSKDGTSNDRMEIYSLDISLMGPAFFFYPLYPPAEGIPL 542
++ C +D++ + + + TS +S I G P++P A +
Sbjct: 406 QQIVVCRLDLMAKFCRNTLH--FPEDTSQIEQH-FSRTIVCQG---HLVPIHPIAMPVHW 459
Query: 543 DFSLAQEALTISTIPDIIILPSDMKYFIKVLSLGGRNEGEEQKKCVCVNPGRLAKGE 599
D+ AL + +PD+I++ + F Q C +N G K +
Sbjct: 460 DYD---PALWLYPLPDLIVMGDSCQSF-----------SSTQHGCTVLNTGSFVKSK 502
>gi|300708306|ref|XP_002996335.1| hypothetical protein NCER_100595 [Nosema ceranae BRL01]
gi|239605628|gb|EEQ82664.1| hypothetical protein NCER_100595 [Nosema ceranae BRL01]
Length = 352
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 189 KKCSLMVHGSGPEPGCRFMYDRTEDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRT 248
KK L + P+ ++ Y + DR+ +++RI+++ + L +E T S+ +
Sbjct: 13 KKTPLKITYERPKKN-QYFYIKKMDRYLYIKSRIQENKKYFLEI-LNKEFKPVTFQSESS 70
Query: 249 LFAVGMICCDGDGHLNDKSVLLQSSVEHSGGQRVRLDLHKLGEFSLFPGQVVGIEGSNPS 308
F G+I + K + + ++ S ++L+L+ FSLF GQ+V ++G N
Sbjct: 71 YFTYGVIFITPE-----KDIYIYNNDNESNDTPIKLNLNYCKRFSLFHGQLVVLKGKNLG 125
Query: 309 GHCLIASKL 317
+ + S++
Sbjct: 126 DNEFLVSEI 134
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,514,779,129
Number of Sequences: 23463169
Number of extensions: 477871294
Number of successful extensions: 1077368
Number of sequences better than 100.0: 461
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 1075205
Number of HSP's gapped (non-prelim): 645
length of query: 623
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 474
effective length of database: 8,863,183,186
effective search space: 4201148830164
effective search space used: 4201148830164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)