Query 006979
Match_columns 623
No_of_seqs 505 out of 3571
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 14:00:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006979.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006979hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3azo_A Aminopeptidase; POP fam 100.0 2.8E-59 9.4E-64 529.4 59.9 527 68-619 3-549 (662)
2 2xe4_A Oligopeptidase B; hydro 100.0 2.4E-43 8.1E-48 403.1 45.7 464 99-614 126-630 (751)
3 3iuj_A Prolyl endopeptidase; h 100.0 2.5E-42 8.4E-47 392.2 48.1 464 99-614 88-574 (693)
4 2xdw_A Prolyl endopeptidase; a 100.0 7.4E-42 2.5E-46 389.8 48.8 470 98-614 81-587 (710)
5 4a5s_A Dipeptidyl peptidase 4 100.0 4E-42 1.4E-46 393.8 43.8 477 92-612 65-623 (740)
6 2ecf_A Dipeptidyl peptidase IV 100.0 2.3E-41 7.9E-46 387.5 49.3 489 76-611 20-640 (741)
7 2bkl_A Prolyl endopeptidase; m 100.0 4.5E-41 1.5E-45 382.3 46.6 473 91-613 72-565 (695)
8 1yr2_A Prolyl oligopeptidase; 100.0 1.6E-40 5.3E-45 380.5 48.6 468 97-613 115-607 (741)
9 3o4h_A Acylamino-acid-releasin 100.0 6E-41 2.1E-45 373.5 37.3 445 91-616 24-480 (582)
10 2z3z_A Dipeptidyl aminopeptida 100.0 4E-39 1.4E-43 366.9 50.6 468 89-612 82-608 (706)
11 1xfd_A DIP, dipeptidyl aminope 100.0 1.2E-38 4.2E-43 363.7 40.1 476 91-611 63-620 (723)
12 1z68_A Fibroblast activation p 100.0 2E-38 6.9E-43 361.9 40.7 472 91-612 62-617 (719)
13 4hvt_A Ritya.17583.B, post-pro 100.0 7.6E-33 2.6E-37 309.8 41.4 486 83-614 65-599 (711)
14 4a5s_A Dipeptidyl peptidase 4 99.9 2.9E-21 1E-25 220.8 29.4 316 78-436 4-403 (740)
15 3pe7_A Oligogalacturonate lyas 99.8 2.5E-19 8.7E-24 187.7 23.4 309 92-435 39-386 (388)
16 2hqs_A Protein TOLB; TOLB, PAL 99.8 1E-18 3.5E-23 185.6 27.0 243 154-439 143-393 (415)
17 1xfd_A DIP, dipeptidyl aminope 99.8 9.6E-18 3.3E-22 190.9 31.2 315 76-434 2-396 (723)
18 1z68_A Fibroblast activation p 99.8 3.8E-18 1.3E-22 194.2 24.5 306 78-434 3-394 (719)
19 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.2E-17 1.8E-21 172.4 30.0 256 99-406 143-403 (415)
20 2z3z_A Dipeptidyl aminopeptida 99.8 2.9E-16 9.9E-21 178.2 30.7 308 90-440 27-398 (706)
21 3c5m_A Oligogalacturonate lyas 99.7 1.6E-17 5.6E-22 174.0 17.6 320 68-436 7-387 (396)
22 2ojh_A Uncharacterized protein 99.7 5E-16 1.7E-20 154.9 24.0 232 163-439 20-264 (297)
23 2gop_A Trilobed protease; beta 99.7 6.3E-16 2.2E-20 159.2 25.3 297 77-440 4-337 (347)
24 3pe7_A Oligogalacturonate lyas 99.7 5.9E-16 2E-20 162.0 23.4 254 150-440 43-336 (388)
25 2ojh_A Uncharacterized protein 99.7 7.6E-15 2.6E-19 146.2 28.8 233 147-420 44-293 (297)
26 3azo_A Aminopeptidase; POP fam 99.7 9.4E-16 3.2E-20 172.7 24.0 258 147-440 26-332 (662)
27 2ecf_A Dipeptidyl peptidase IV 99.7 6E-15 2.1E-19 168.3 29.3 260 148-440 40-422 (741)
28 3iii_A COCE/NOND family hydrol 99.7 1.8E-16 6.3E-21 172.8 14.6 141 458-612 38-200 (560)
29 3s25_A Hypothetical 7-bladed b 99.7 7.8E-15 2.7E-19 147.8 24.7 258 99-436 25-296 (302)
30 3nuz_A Putative acetyl xylan e 99.7 1.1E-16 3.8E-21 168.7 11.4 147 460-613 91-269 (398)
31 4ao6_A Esterase; hydrolase, th 99.7 2.8E-16 9.6E-21 155.6 12.4 127 471-607 39-181 (259)
32 3c5m_A Oligogalacturonate lyas 99.7 1.4E-15 4.8E-20 159.2 18.0 244 154-440 47-336 (396)
33 1mpx_A Alpha-amino acid ester 99.6 2.5E-16 8.6E-21 175.1 10.6 142 460-610 24-181 (615)
34 2b9v_A Alpha-amino acid ester 99.6 3.1E-16 1.1E-20 175.1 10.8 143 460-611 36-195 (652)
35 3g8y_A SUSD/RAGB-associated es 99.6 6.3E-16 2.1E-20 162.6 11.6 146 460-612 86-263 (391)
36 3o4h_A Acylamino-acid-releasin 99.6 8.3E-15 2.8E-19 162.4 18.4 247 90-396 66-320 (582)
37 2bkl_A Prolyl endopeptidase; m 99.6 1.2E-13 4E-18 156.6 28.0 260 150-438 75-356 (695)
38 3s25_A Hypothetical 7-bladed b 99.6 8.2E-14 2.8E-18 140.3 23.7 238 147-440 18-262 (302)
39 2gop_A Trilobed protease; beta 99.6 5.3E-14 1.8E-18 144.7 22.8 206 191-438 15-256 (347)
40 2jbw_A Dhpon-hydrolase, 2,6-di 99.6 2.9E-15 9.9E-20 157.3 13.1 137 459-613 125-261 (386)
41 2xdw_A Prolyl endopeptidase; a 99.6 2.7E-13 9.4E-18 153.9 28.6 258 152-435 81-370 (710)
42 1vlq_A Acetyl xylan esterase; 99.6 4.9E-15 1.7E-19 152.3 11.5 144 459-613 66-232 (337)
43 3i2k_A Cocaine esterase; alpha 99.6 2.9E-15 1E-19 165.4 8.7 138 459-611 7-148 (587)
44 3doh_A Esterase; alpha-beta hy 99.6 1.3E-14 4.5E-19 151.9 13.3 150 460-613 143-303 (380)
45 2o2g_A Dienelactone hydrolase; 99.6 1.2E-14 4.2E-19 139.1 11.9 138 460-611 11-152 (223)
46 3trd_A Alpha/beta hydrolase; c 99.6 1.8E-14 6.1E-19 136.9 12.7 136 458-611 3-141 (208)
47 3ga7_A Acetyl esterase; phosph 99.6 2E-14 6.9E-19 147.2 14.0 130 461-611 63-204 (326)
48 3vgz_A Uncharacterized protein 99.5 3.7E-12 1.3E-16 130.7 30.2 282 89-419 41-334 (353)
49 1yr2_A Prolyl oligopeptidase; 99.5 6.4E-13 2.2E-17 151.6 26.8 263 151-440 115-402 (741)
50 3fcy_A Xylan esterase 1; alpha 99.5 1E-14 3.5E-19 150.5 10.7 142 460-613 81-240 (346)
51 1k32_A Tricorn protease; prote 99.5 1.6E-13 5.4E-18 162.7 22.3 311 85-440 49-468 (1045)
52 3f67_A Putative dienelactone h 99.5 1.7E-14 5.7E-19 140.2 11.3 136 460-607 5-148 (241)
53 2wir_A Pesta, alpha/beta hydro 99.5 2.1E-14 7.2E-19 146.0 10.4 132 458-609 48-189 (313)
54 2wtm_A EST1E; hydrolase; 1.60A 99.5 4.8E-14 1.7E-18 138.4 12.6 134 464-612 4-139 (251)
55 2fuk_A XC6422 protein; A/B hyd 99.5 6.6E-14 2.3E-18 134.0 13.1 133 459-610 8-146 (220)
56 1l7a_A Cephalosporin C deacety 99.5 3.2E-14 1.1E-18 144.2 11.1 143 460-613 55-213 (318)
57 3fcx_A FGH, esterase D, S-form 99.5 1.4E-14 4.8E-19 144.5 8.3 146 461-611 16-179 (282)
58 3fak_A Esterase/lipase, ESTE5; 99.5 1.2E-14 4E-19 148.7 7.8 119 474-611 66-191 (322)
59 3ebl_A Gibberellin receptor GI 99.5 7.8E-14 2.7E-18 145.2 13.7 139 459-611 62-230 (365)
60 3hxk_A Sugar hydrolase; alpha- 99.5 5.4E-14 1.8E-18 139.9 11.7 137 464-612 17-159 (276)
61 2hm7_A Carboxylesterase; alpha 99.5 3.7E-14 1.3E-18 144.0 10.7 134 459-611 46-189 (310)
62 2xe4_A Oligopeptidase B; hydro 99.5 3.4E-12 1.2E-16 145.6 27.8 259 152-440 124-415 (751)
63 3k2i_A Acyl-coenzyme A thioest 99.5 1.1E-13 3.9E-18 147.0 14.2 115 474-608 144-259 (422)
64 3ain_A 303AA long hypothetical 99.5 1.4E-13 4.8E-18 140.8 13.8 132 459-610 63-202 (323)
65 3hlk_A Acyl-coenzyme A thioest 99.5 1.6E-13 5.6E-18 146.7 15.0 116 474-609 160-276 (446)
66 2i3d_A AGR_C_3351P, hypothetic 99.5 2.4E-13 8.1E-18 133.3 14.8 134 460-611 20-159 (249)
67 1k32_A Tricorn protease; prote 99.5 4.5E-12 1.6E-16 150.2 28.7 267 89-418 204-491 (1045)
68 2hdw_A Hypothetical protein PA 99.5 6.1E-14 2.1E-18 145.5 11.2 136 460-607 67-204 (367)
69 3qh4_A Esterase LIPW; structur 99.5 8.7E-14 3E-18 141.9 11.3 133 459-611 58-200 (317)
70 1lns_A X-prolyl dipeptidyl ami 99.5 2.1E-13 7.3E-18 154.4 15.2 131 471-614 182-381 (763)
71 3bjr_A Putative carboxylestera 99.5 5.4E-14 1.8E-18 140.6 9.3 139 459-610 17-174 (283)
72 3iuj_A Prolyl endopeptidase; h 99.5 5.8E-12 2E-16 142.5 26.9 261 152-440 86-366 (693)
73 3pfb_A Cinnamoyl esterase; alp 99.5 1.5E-13 5.1E-18 135.8 12.2 136 460-612 21-158 (270)
74 2c7b_A Carboxylesterase, ESTE1 99.5 8.3E-14 2.9E-18 141.4 10.2 131 459-609 46-186 (311)
75 3bxp_A Putative lipase/esteras 99.5 9.9E-14 3.4E-18 138.1 10.5 137 462-611 5-161 (277)
76 4e15_A Kynurenine formamidase; 99.5 1.8E-13 6.2E-18 138.4 12.5 134 461-615 58-201 (303)
77 3h04_A Uncharacterized protein 99.5 1.1E-12 3.8E-17 129.1 16.9 126 462-610 4-131 (275)
78 3u4y_A Uncharacterized protein 99.5 2.8E-11 9.6E-16 123.2 27.9 242 149-435 44-306 (331)
79 2o7r_A CXE carboxylesterase; a 99.5 1.9E-13 6.6E-18 140.5 11.7 133 461-610 55-206 (338)
80 1jkm_A Brefeldin A esterase; s 99.5 1.5E-13 5.2E-18 142.8 11.0 134 461-610 82-227 (361)
81 2zsh_A Probable gibberellin re 99.5 2.9E-13 9.9E-18 140.1 13.0 136 461-610 72-230 (351)
82 1l0q_A Surface layer protein; 99.4 1.4E-11 4.8E-16 128.6 25.4 238 149-436 36-278 (391)
83 1lzl_A Heroin esterase; alpha/ 99.4 1.3E-13 4.6E-18 140.8 9.5 134 460-611 50-194 (323)
84 1zi8_A Carboxymethylenebutenol 99.4 5.6E-14 1.9E-18 135.9 5.9 133 463-609 5-149 (236)
85 3mve_A FRSA, UPF0255 protein V 99.4 2.6E-13 9E-18 143.5 11.4 133 460-609 167-300 (415)
86 3scy_A Hypothetical bacterial 99.4 4.3E-11 1.5E-15 123.8 27.9 275 88-397 49-346 (361)
87 3ksr_A Putative serine hydrola 99.4 1.6E-13 5.3E-18 137.5 9.1 129 461-609 6-135 (290)
88 1jjf_A Xylanase Z, endo-1,4-be 99.4 6.5E-13 2.2E-17 131.7 13.5 139 459-610 30-182 (268)
89 2pbl_A Putative esterase/lipas 99.4 9.3E-13 3.2E-17 129.9 14.5 129 462-613 39-175 (262)
90 3hju_A Monoglyceride lipase; a 99.4 9.9E-13 3.4E-17 134.8 13.3 130 465-610 39-169 (342)
91 1jji_A Carboxylesterase; alpha 99.4 4.2E-13 1.4E-17 136.4 10.2 129 460-610 55-193 (311)
92 1gkl_A Endo-1,4-beta-xylanase 99.4 1.2E-12 4.2E-17 132.0 13.4 138 459-610 39-195 (297)
93 3bws_A Protein LP49; two-domai 99.4 7.4E-11 2.5E-15 124.9 27.5 293 89-432 123-431 (433)
94 4ezi_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 139.4 9.3 151 460-616 42-209 (377)
95 2qm0_A BES; alpha-beta structu 99.4 4.8E-13 1.6E-17 133.5 8.8 153 456-612 13-191 (275)
96 3e4d_A Esterase D; S-formylglu 99.4 4.2E-13 1.4E-17 133.6 8.4 145 460-611 14-178 (278)
97 3hfq_A Uncharacterized protein 99.4 1E-10 3.4E-15 120.2 25.9 265 149-440 44-326 (347)
98 3d0k_A Putative poly(3-hydroxy 99.4 2.2E-12 7.4E-17 130.5 13.0 139 463-610 26-179 (304)
99 3g4e_A Regucalcin; six bladed 99.4 2E-11 6.8E-16 123.0 19.9 253 81-379 4-264 (297)
100 1l0q_A Surface layer protein; 99.4 8.3E-11 2.8E-15 122.7 25.1 232 156-436 3-236 (391)
101 3u4y_A Uncharacterized protein 99.4 2.3E-10 7.9E-15 116.4 27.7 239 154-439 9-258 (331)
102 3h2g_A Esterase; xanthomonas o 99.4 8.4E-13 2.9E-17 139.0 9.7 151 460-614 45-215 (397)
103 3pe6_A Monoglyceride lipase; a 99.4 2.9E-12 1E-16 127.9 13.2 130 465-610 21-151 (303)
104 1r88_A MPT51/MPB51 antigen; AL 99.4 4.4E-12 1.5E-16 126.8 13.2 138 459-611 9-150 (280)
105 2uz0_A Esterase, tributyrin es 99.3 2.5E-12 8.4E-17 126.7 10.7 146 461-612 7-155 (263)
106 1tht_A Thioesterase; 2.10A {Vi 99.3 7E-12 2.4E-16 127.0 14.2 136 460-612 6-143 (305)
107 3ls2_A S-formylglutathione hyd 99.3 1.4E-12 4.7E-17 130.0 8.9 147 460-611 14-177 (280)
108 3i6y_A Esterase APC40077; lipa 99.3 1.6E-12 5.5E-17 129.5 9.2 147 460-611 16-179 (280)
109 3fnb_A Acylaminoacyl peptidase 99.3 8.1E-12 2.8E-16 131.8 15.0 134 460-615 134-269 (405)
110 3k6k_A Esterase/lipase; alpha/ 99.3 1.8E-12 6.3E-17 132.3 9.6 108 492-611 77-191 (322)
111 3d59_A Platelet-activating fac 99.3 1.5E-12 5.1E-17 136.5 9.0 115 492-608 95-253 (383)
112 1vkh_A Putative serine hydrola 99.3 7E-12 2.4E-16 124.5 13.4 110 492-614 38-172 (273)
113 3vis_A Esterase; alpha/beta-hy 99.3 2.4E-12 8.1E-17 130.5 9.9 116 471-609 80-202 (306)
114 3vgz_A Uncharacterized protein 99.3 9.7E-10 3.3E-14 112.5 29.6 237 156-436 54-306 (353)
115 4b6g_A Putative esterase; hydr 99.3 1.4E-12 4.9E-17 130.3 7.9 145 461-611 22-183 (283)
116 3llc_A Putative hydrolase; str 99.3 5.7E-12 1.9E-16 123.8 12.0 132 461-612 11-151 (270)
117 3bdi_A Uncharacterized protein 99.3 2.6E-11 8.9E-16 114.3 16.0 125 462-609 5-136 (207)
118 3d7r_A Esterase; alpha/beta fo 99.3 1.5E-12 5.3E-17 133.1 7.9 116 475-611 84-206 (326)
119 4fbl_A LIPS lipolytic enzyme; 99.3 2.3E-12 8E-17 128.8 8.4 106 495-610 51-157 (281)
120 1jfr_A Lipase; serine hydrolas 99.3 7.4E-12 2.5E-16 123.5 11.0 128 461-609 25-158 (262)
121 1pby_B Quinohemoprotein amine 99.3 2.4E-10 8.3E-15 116.0 22.4 233 157-436 3-272 (337)
122 1sfr_A Antigen 85-A; alpha/bet 99.3 1.4E-11 4.8E-16 124.7 12.9 142 460-611 8-157 (304)
123 2ghs_A AGR_C_1268P; regucalcin 99.3 1.1E-10 3.9E-15 119.2 19.7 249 80-379 39-294 (326)
124 3bws_A Protein LP49; two-domai 99.3 6.1E-10 2.1E-14 117.8 25.9 246 149-436 127-393 (433)
125 1ri6_A Putative isomerase YBHE 99.3 7.1E-10 2.4E-14 112.9 25.0 262 148-439 41-316 (343)
126 3e5z_A Putative gluconolactona 99.3 3.8E-10 1.3E-14 113.2 22.5 258 82-395 21-291 (296)
127 1pby_B Quinohemoprotein amine 99.3 9.5E-10 3.2E-14 111.6 25.3 245 149-436 38-313 (337)
128 1k8q_A Triacylglycerol lipase, 99.3 1.3E-11 4.4E-16 127.9 11.4 145 460-609 26-184 (377)
129 1ri6_A Putative isomerase YBHE 99.3 1.3E-09 4.3E-14 111.0 25.8 267 89-397 38-317 (343)
130 1qe3_A PNB esterase, para-nitr 99.3 2E-12 6.7E-17 139.3 4.8 131 473-610 81-220 (489)
131 4f0j_A Probable hydrolytic enz 99.3 4.7E-11 1.6E-15 120.0 14.2 130 460-608 19-149 (315)
132 3hfq_A Uncharacterized protein 99.2 1.2E-09 4.1E-14 112.1 24.4 272 89-397 40-326 (347)
133 4h0c_A Phospholipase/carboxyle 99.2 7.5E-12 2.6E-16 119.3 6.8 112 492-608 19-135 (210)
134 3rm3_A MGLP, thermostable mono 99.2 2.5E-11 8.4E-16 119.8 10.8 109 495-614 40-149 (270)
135 2qru_A Uncharacterized protein 99.2 5.8E-11 2E-15 118.1 13.5 117 471-609 13-135 (274)
136 3dkr_A Esterase D; alpha beta 99.2 2.3E-11 7.8E-16 117.9 10.3 107 494-609 21-129 (251)
137 2h7c_A Liver carboxylesterase 99.2 4.4E-12 1.5E-16 138.4 5.1 127 475-610 99-234 (542)
138 3qit_A CURM TE, polyketide syn 99.2 1.8E-10 6.2E-15 113.5 15.7 126 462-609 5-131 (286)
139 1jmx_B Amine dehydrogenase; ox 99.2 3.6E-09 1.2E-13 107.9 25.2 161 156-341 12-182 (349)
140 3og9_A Protein YAHD A copper i 99.2 2.1E-11 7.2E-16 115.8 7.3 114 492-609 14-138 (209)
141 3pic_A CIP2; alpha/beta hydrol 99.2 7.4E-11 2.5E-15 118.9 11.5 116 473-607 90-218 (375)
142 1imj_A CIB, CCG1-interacting f 99.2 3.7E-11 1.3E-15 113.7 8.9 122 471-610 15-140 (210)
143 3c8d_A Enterochelin esterase; 99.2 1.8E-11 6.2E-16 128.7 6.8 139 459-610 166-313 (403)
144 1fj2_A Protein (acyl protein t 99.2 6E-11 2.1E-15 114.1 9.7 113 492-612 20-152 (232)
145 3b5e_A MLL8374 protein; NP_108 99.2 2.4E-11 8.1E-16 116.6 6.7 128 471-609 14-147 (223)
146 3scy_A Hypothetical bacterial 99.2 7.7E-09 2.6E-13 106.7 26.2 257 148-437 53-343 (361)
147 3dr2_A Exported gluconolactona 99.2 1.4E-09 4.6E-14 109.9 19.9 255 81-388 37-304 (305)
148 4g4g_A 4-O-methyl-glucuronoyl 99.2 8.8E-11 3E-15 119.6 10.4 114 474-608 124-253 (433)
149 2qjw_A Uncharacterized protein 99.1 7.8E-11 2.7E-15 108.2 8.3 108 493-611 2-110 (176)
150 2gzs_A IROE protein; enterobac 99.1 8.2E-11 2.8E-15 117.3 8.8 147 457-610 9-177 (278)
151 1gxr_A ESG1, transducin-like e 99.1 2.2E-08 7.7E-13 101.2 27.1 267 87-415 50-323 (337)
152 2ha2_A ACHE, acetylcholinester 99.1 2.1E-11 7.1E-16 133.1 4.5 127 475-608 97-232 (543)
153 1gxr_A ESG1, transducin-like e 99.1 3E-08 1E-12 100.3 27.8 243 146-436 53-299 (337)
154 1dqz_A 85C, protein (antigen 8 99.1 3.1E-10 1.1E-14 113.2 12.6 141 460-611 5-152 (280)
155 2ogt_A Thermostable carboxyles 99.1 6.9E-11 2.3E-15 127.6 8.3 128 475-609 85-224 (498)
156 2h1i_A Carboxylesterase; struc 99.1 2.3E-10 7.8E-15 109.7 11.0 114 493-610 36-156 (226)
157 1ukc_A ESTA, esterase; fungi, 99.1 6.3E-11 2.2E-15 128.5 7.8 131 474-609 85-226 (522)
158 1zoi_A Esterase; alpha/beta hy 99.1 4E-10 1.4E-14 111.7 13.0 118 466-607 4-124 (276)
159 1a88_A Chloroperoxidase L; hal 99.1 7.1E-10 2.4E-14 109.6 14.5 118 466-607 3-123 (275)
160 3sty_A Methylketone synthase 1 99.1 3.7E-10 1.3E-14 110.7 12.3 106 493-608 10-116 (267)
161 2fx5_A Lipase; alpha-beta hydr 99.1 1.1E-10 3.7E-15 114.9 8.3 110 477-609 34-152 (258)
162 2y6u_A Peroxisomal membrane pr 99.1 1.4E-10 4.7E-15 121.6 9.5 138 466-610 25-174 (398)
163 1auo_A Carboxylesterase; hydro 99.1 4.7E-10 1.6E-14 106.6 12.0 116 492-610 11-144 (218)
164 3ow8_A WD repeat-containing pr 99.1 1.9E-08 6.4E-13 102.3 24.6 219 147-414 83-306 (321)
165 2dg1_A DRP35, lactonase; beta 99.1 2.1E-08 7.3E-13 102.0 24.6 261 88-390 44-316 (333)
166 1a8s_A Chloroperoxidase F; hal 99.1 1E-09 3.5E-14 108.3 14.2 116 466-607 3-121 (273)
167 3zwl_B Eukaryotic translation 99.1 7.6E-08 2.6E-12 98.5 28.8 292 86-434 30-347 (369)
168 1q0r_A RDMC, aclacinomycin met 99.1 1.3E-09 4.6E-14 109.3 15.1 118 471-608 9-129 (298)
169 1ufo_A Hypothetical protein TT 99.1 6.7E-11 2.3E-15 113.8 5.0 119 475-607 13-139 (238)
170 4gqb_B Methylosome protein 50; 99.1 4E-08 1.4E-12 101.0 26.2 246 144-433 82-331 (344)
171 2fj0_A JuvenIle hormone estera 99.1 3.3E-11 1.1E-15 131.6 2.7 110 495-607 115-232 (551)
172 2ocg_A Valacyclovir hydrolase; 99.1 1.4E-09 4.7E-14 106.3 13.7 118 471-608 10-129 (254)
173 2r11_A Carboxylesterase NP; 26 99.0 2.2E-09 7.4E-14 108.2 15.3 125 462-610 46-171 (306)
174 1a8q_A Bromoperoxidase A1; hal 99.0 1.7E-09 5.9E-14 106.8 14.1 115 467-607 4-121 (274)
175 2yys_A Proline iminopeptidase- 99.0 2.5E-09 8.5E-14 106.8 15.2 124 464-610 5-131 (286)
176 4dnp_A DAD2; alpha/beta hydrol 99.0 7.2E-10 2.5E-14 108.4 11.0 107 494-609 19-126 (269)
177 2r8b_A AGR_C_4453P, uncharacte 99.0 2.4E-10 8.2E-15 111.6 7.5 112 493-610 60-178 (251)
178 3cn9_A Carboxylesterase; alpha 99.0 9.7E-10 3.3E-14 105.4 11.5 112 492-612 21-156 (226)
179 1brt_A Bromoperoxidase A2; hal 99.0 8.2E-10 2.8E-14 109.6 10.9 98 497-607 25-125 (277)
180 3dqz_A Alpha-hydroxynitrIle ly 99.0 1.4E-09 4.7E-14 106.0 12.3 103 496-608 5-108 (258)
181 3ia2_A Arylesterase; alpha-bet 99.0 2.1E-09 7.2E-14 105.9 13.8 116 466-607 3-121 (271)
182 3i28_A Epoxide hydrolase 2; ar 99.0 2.5E-09 8.6E-14 116.7 15.8 126 459-608 235-362 (555)
183 1hkh_A Gamma lactamase; hydrol 99.0 1.1E-09 3.7E-14 108.6 11.6 98 497-607 25-125 (279)
184 3r0v_A Alpha/beta hydrolase fo 99.0 2.9E-09 9.9E-14 103.8 14.5 115 466-609 7-122 (262)
185 1mtz_A Proline iminopeptidase; 99.0 2E-09 7E-14 107.4 13.6 120 471-610 13-134 (293)
186 3u1t_A DMMA haloalkane dehalog 99.0 2E-09 6.9E-14 107.6 13.4 115 471-609 17-132 (309)
187 2e3j_A Epoxide hydrolase EPHB; 99.0 2.7E-09 9.3E-14 110.2 14.7 120 471-608 11-131 (356)
188 3zwl_B Eukaryotic translation 99.0 1.4E-07 4.8E-12 96.5 27.7 232 147-418 35-279 (369)
189 4g56_B MGC81050 protein; prote 99.0 3.2E-08 1.1E-12 102.2 22.8 294 88-433 42-343 (357)
190 3oos_A Alpha/beta hydrolase fa 99.0 2.5E-09 8.5E-14 105.0 13.6 103 496-609 24-127 (278)
191 1thg_A Lipase; hydrolase(carbo 99.0 3.2E-10 1.1E-14 123.5 7.7 126 475-607 106-251 (544)
192 3r40_A Fluoroacetate dehalogen 99.0 2.3E-09 7.8E-14 107.0 13.4 128 460-609 12-140 (306)
193 3kxp_A Alpha-(N-acetylaminomet 99.0 2.8E-09 9.5E-14 107.6 14.0 114 471-609 56-170 (314)
194 4fhz_A Phospholipase/carboxyle 99.0 1.9E-10 6.6E-15 114.7 5.2 115 492-608 63-192 (285)
195 2wfl_A Polyneuridine-aldehyde 99.0 1.3E-09 4.4E-14 107.5 11.2 103 494-607 9-113 (264)
196 3bwx_A Alpha/beta hydrolase; Y 99.0 2.6E-09 9.1E-14 106.2 13.5 123 461-605 5-129 (285)
197 1llf_A Lipase 3; candida cylin 99.0 4.4E-10 1.5E-14 122.2 8.3 127 474-607 97-243 (534)
198 3om8_A Probable hydrolase; str 99.0 4E-09 1.4E-13 104.1 14.5 118 466-607 9-127 (266)
199 1p0i_A Cholinesterase; serine 99.0 5.9E-10 2E-14 121.2 9.0 127 475-609 93-228 (529)
200 3nwo_A PIP, proline iminopepti 99.0 3.5E-09 1.2E-13 108.1 14.3 124 471-610 36-163 (330)
201 1dx4_A ACHE, acetylcholinester 99.0 4.6E-10 1.6E-14 123.3 8.1 117 492-608 138-267 (585)
202 3qvm_A OLEI00960; structural g 99.0 1.6E-09 5.5E-14 106.6 11.2 105 496-609 29-134 (282)
203 3ibt_A 1H-3-hydroxy-4-oxoquino 99.0 2.8E-09 9.6E-14 104.3 12.8 115 471-608 7-123 (264)
204 3u0v_A Lysophospholipase-like 99.0 4.9E-10 1.7E-14 108.4 7.2 118 492-612 20-157 (239)
205 1jmx_B Amine dehydrogenase; ox 99.0 4.5E-08 1.5E-12 99.7 22.3 123 148-283 46-176 (349)
206 3e0x_A Lipase-esterase related 99.0 1.8E-09 6.2E-14 103.9 11.1 101 494-610 15-121 (245)
207 2pl5_A Homoserine O-acetyltran 99.0 2.1E-09 7.1E-14 110.9 12.2 131 471-610 29-182 (366)
208 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.2E-07 4E-12 98.2 25.2 218 193-437 42-296 (365)
209 2b61_A Homoserine O-acetyltran 99.0 2.4E-09 8.2E-14 111.0 12.4 130 471-609 42-190 (377)
210 3g9x_A Haloalkane dehalogenase 99.0 2.1E-09 7.1E-14 107.0 11.2 116 471-609 18-134 (299)
211 2cjp_A Epoxide hydrolase; HET: 99.0 6.3E-09 2.2E-13 105.8 15.0 118 471-607 19-138 (328)
212 2vdu_B TRNA (guanine-N(7)-)-me 99.0 1.2E-07 4.1E-12 101.0 25.6 256 147-436 105-396 (450)
213 1ea5_A ACHE, acetylcholinester 99.0 8.9E-10 3E-14 119.9 8.9 127 475-609 95-230 (537)
214 4g9e_A AHL-lactonase, alpha/be 99.0 3.5E-09 1.2E-13 104.1 12.5 103 495-607 24-127 (279)
215 2mad_H Methylamine dehydrogena 99.0 3.3E-07 1.1E-11 95.2 28.1 243 166-436 48-353 (373)
216 2xua_A PCAD, 3-oxoadipate ENOL 99.0 5.8E-09 2E-13 102.8 14.1 117 471-608 10-127 (266)
217 1wm1_A Proline iminopeptidase; 99.0 6.9E-09 2.4E-13 104.8 14.8 124 462-607 15-139 (317)
218 4ery_A WD repeat-containing pr 99.0 5.2E-07 1.8E-11 90.6 28.6 268 88-414 23-295 (312)
219 2bce_A Cholesterol esterase; h 99.0 1.2E-10 4.2E-15 127.3 1.7 127 475-607 81-222 (579)
220 3kda_A CFTR inhibitory factor 98.9 4.1E-09 1.4E-13 105.1 12.7 112 471-607 18-131 (301)
221 1uxo_A YDEN protein; hydrolase 98.9 3.4E-09 1.2E-13 98.7 11.3 96 495-609 4-103 (192)
222 3g4e_A Regucalcin; six bladed 98.9 2E-07 6.7E-12 93.5 25.0 226 150-420 18-263 (297)
223 1r3d_A Conserved hypothetical 98.9 3.4E-09 1.2E-13 104.4 11.8 102 495-607 16-121 (264)
224 2xt0_A Haloalkane dehalogenase 98.9 3.8E-09 1.3E-13 106.2 12.3 115 473-607 33-149 (297)
225 1azw_A Proline iminopeptidase; 98.9 8.7E-09 3E-13 103.8 15.0 124 462-607 12-136 (313)
226 3vdx_A Designed 16NM tetrahedr 98.9 3.9E-09 1.3E-13 113.0 12.7 101 496-609 25-128 (456)
227 2wue_A 2-hydroxy-6-OXO-6-pheny 98.9 6.9E-09 2.3E-13 103.9 13.8 118 471-608 21-141 (291)
228 1xkl_A SABP2, salicylic acid-b 98.9 3.8E-09 1.3E-13 104.8 11.7 101 496-607 5-107 (273)
229 2rau_A Putative esterase; NP_3 98.9 5.7E-10 2E-14 114.9 5.9 111 495-607 50-179 (354)
230 1tqh_A Carboxylesterase precur 98.9 1E-09 3.5E-14 107.1 7.3 99 496-606 17-117 (247)
231 1isp_A Lipase; alpha/beta hydr 98.9 1.8E-09 6.3E-14 99.7 8.6 100 495-610 3-108 (181)
232 1jof_A Carboxy-CIS,CIS-muconat 98.9 1.5E-07 5E-12 97.4 23.9 169 149-337 44-229 (365)
233 3ow8_A WD repeat-containing pr 98.9 1.3E-07 4.5E-12 96.0 23.0 189 149-384 127-317 (321)
234 3l80_A Putative uncharacterize 98.9 6E-09 2.1E-13 103.7 12.8 102 496-607 42-144 (292)
235 3vl1_A 26S proteasome regulato 98.9 3.2E-07 1.1E-11 96.2 26.7 277 92-433 60-365 (420)
236 2ymu_A WD-40 repeat protein; u 98.9 3.7E-07 1.3E-11 100.1 28.3 228 149-432 308-538 (577)
237 1b6g_A Haloalkane dehalogenase 98.9 4E-09 1.4E-13 106.8 11.2 115 473-607 34-150 (310)
238 2ymu_A WD-40 repeat protein; u 98.9 2.1E-07 7.2E-12 102.1 25.9 215 148-414 348-565 (577)
239 1c4x_A BPHD, protein (2-hydrox 98.9 7.2E-09 2.4E-13 103.1 12.7 118 471-608 15-138 (285)
240 2qs9_A Retinoblastoma-binding 98.9 5E-09 1.7E-13 97.9 10.8 95 494-609 3-101 (194)
241 3c6x_A Hydroxynitrilase; atomi 98.9 3.6E-09 1.2E-13 103.9 10.0 102 496-607 4-106 (257)
242 1iup_A META-cleavage product h 98.9 4.9E-09 1.7E-13 104.4 11.1 103 496-608 26-130 (282)
243 3hss_A Putative bromoperoxidas 98.9 5.1E-09 1.7E-13 104.1 11.0 103 495-610 43-147 (293)
244 3e5z_A Putative gluconolactona 98.9 2.2E-07 7.6E-12 92.8 23.1 234 149-436 32-289 (296)
245 3i1i_A Homoserine O-acetyltran 98.9 6.8E-09 2.3E-13 107.2 12.2 115 493-609 40-184 (377)
246 1qlw_A Esterase; anisotropic r 98.9 5.3E-09 1.8E-13 106.8 11.2 120 474-607 49-232 (328)
247 2dg1_A DRP35, lactonase; beta 98.9 4.1E-07 1.4E-11 92.3 25.4 249 151-433 51-316 (333)
248 2xmz_A Hydrolase, alpha/beta h 98.9 5.4E-09 1.9E-13 103.1 10.8 101 496-608 17-118 (269)
249 2ghs_A AGR_C_1268P; regucalcin 98.9 1.6E-07 5.5E-12 95.6 22.1 224 150-420 54-293 (326)
250 3dsm_A Uncharacterized protein 98.9 3.6E-07 1.2E-11 93.1 24.4 238 149-435 48-303 (328)
251 1u2e_A 2-hydroxy-6-ketonona-2, 98.9 1.2E-08 4.1E-13 101.7 13.1 103 496-608 37-142 (289)
252 2vat_A Acetyl-COA--deacetylcep 98.9 4.1E-09 1.4E-13 112.4 10.1 114 494-609 108-236 (444)
253 2puj_A 2-hydroxy-6-OXO-6-pheny 98.9 4.9E-09 1.7E-13 104.6 9.9 103 496-608 34-139 (286)
254 1pja_A Palmitoyl-protein thioe 98.9 4E-09 1.4E-13 105.9 9.2 101 494-608 35-139 (302)
255 3fsg_A Alpha/beta superfamily 98.9 2.3E-09 8E-14 104.9 7.3 101 496-608 22-124 (272)
256 4ery_A WD repeat-containing pr 98.9 6.6E-07 2.3E-11 89.9 25.4 237 147-435 26-270 (312)
257 3fob_A Bromoperoxidase; struct 98.8 9.5E-09 3.3E-13 102.0 11.1 100 496-607 28-129 (281)
258 2q0x_A Protein DUF1749, unchar 98.8 1.3E-08 4.4E-13 104.3 12.3 102 494-609 37-146 (335)
259 3v48_A Aminohydrolase, putativ 98.8 1.3E-08 4.5E-13 100.4 12.0 103 494-608 14-117 (268)
260 2qvb_A Haloalkane dehalogenase 98.8 1.5E-08 5.3E-13 100.5 12.6 118 471-609 16-135 (297)
261 3i2n_A WD repeat-containing pr 98.8 5.3E-07 1.8E-11 91.9 24.5 246 88-388 18-291 (357)
262 2psd_A Renilla-luciferin 2-mon 98.8 1.9E-08 6.5E-13 102.1 13.3 99 496-606 44-144 (318)
263 4aez_A CDC20, WD repeat-contai 98.8 2.2E-06 7.6E-11 89.5 29.6 238 147-435 137-382 (401)
264 2aq5_A Coronin-1A; WD40 repeat 98.8 1.8E-07 6.1E-12 97.9 21.0 203 147-392 84-301 (402)
265 1wom_A RSBQ, sigma factor SIGB 98.8 4.6E-09 1.6E-13 103.8 8.2 102 496-607 21-124 (271)
266 1ehy_A Protein (soluble epoxid 98.8 1.7E-08 5.8E-13 101.1 12.3 102 496-606 30-132 (294)
267 1npe_A Nidogen, entactin; glyc 98.8 4.1E-07 1.4E-11 89.5 22.0 235 156-435 3-240 (267)
268 1nir_A Nitrite reductase; hemo 98.8 1.2E-06 4E-11 95.8 27.4 251 149-436 226-517 (543)
269 1mj5_A 1,3,4,6-tetrachloro-1,4 98.8 2.1E-08 7.1E-13 100.0 12.4 118 471-609 17-136 (302)
270 4fle_A Esterase; structural ge 98.8 2.7E-09 9.3E-14 100.5 5.4 93 496-609 3-98 (202)
271 4i19_A Epoxide hydrolase; stru 98.8 3.4E-08 1.2E-12 103.2 14.2 118 471-607 76-203 (388)
272 3bix_A Neuroligin-1, neuroligi 98.8 1.1E-09 3.9E-14 120.0 2.9 128 474-607 111-248 (574)
273 1j1i_A META cleavage compound 98.8 2.3E-08 7.9E-13 100.2 12.3 102 496-608 37-141 (296)
274 3bf7_A Esterase YBFF; thioeste 98.8 1.7E-08 5.8E-13 98.7 10.8 96 495-605 16-113 (255)
275 3gff_A IROE-like serine hydrol 98.8 3.9E-09 1.3E-13 107.5 6.0 140 460-609 11-173 (331)
276 3afi_E Haloalkane dehalogenase 98.8 1.6E-08 5.5E-13 102.5 10.5 114 471-607 15-129 (316)
277 2ynn_A Coatomer subunit beta'; 98.8 1.1E-06 3.7E-11 88.2 23.9 239 147-435 16-261 (304)
278 2wj6_A 1H-3-hydroxy-4-oxoquina 98.8 1.2E-08 4.2E-13 101.2 9.3 98 496-607 28-128 (276)
279 3sjl_D Methylamine dehydrogena 98.8 1.4E-06 4.6E-11 89.9 24.7 257 155-436 45-366 (386)
280 4g56_B MGC81050 protein; prote 98.8 1.5E-07 5E-12 97.2 17.7 206 147-396 142-351 (357)
281 1nir_A Nitrite reductase; hemo 98.8 1.3E-06 4.5E-11 95.4 26.1 248 149-436 183-461 (543)
282 3guu_A Lipase A; protein struc 98.8 2.8E-08 9.5E-13 104.8 12.2 143 460-616 74-245 (462)
283 1npe_A Nidogen, entactin; glyc 98.8 6.2E-07 2.1E-11 88.2 21.5 203 149-397 40-246 (267)
284 3p2m_A Possible hydrolase; alp 98.8 1.3E-08 4.5E-13 103.6 9.5 100 496-609 82-182 (330)
285 1tca_A Lipase; hydrolase(carbo 98.8 3.6E-08 1.2E-12 99.9 12.5 119 472-609 13-136 (317)
286 3vl1_A 26S proteasome regulato 98.8 2.4E-06 8.3E-11 89.4 27.2 157 147-336 142-324 (420)
287 2aq5_A Coronin-1A; WD40 repeat 98.8 3.9E-06 1.3E-10 87.6 28.7 242 149-435 39-301 (402)
288 4gqb_B Methylosome protein 50; 98.8 3.4E-07 1.2E-11 94.0 19.4 243 90-387 84-330 (344)
289 3c75_H MADH, methylamine dehyd 98.7 3.8E-06 1.3E-10 88.0 27.3 257 155-436 85-405 (426)
290 2oiz_A Aromatic amine dehydrog 98.7 7.4E-06 2.5E-10 84.5 29.2 244 164-436 30-337 (361)
291 3v65_B Low-density lipoprotein 98.7 2.1E-06 7.3E-11 89.4 25.3 230 156-435 89-320 (386)
292 3c5v_A PME-1, protein phosphat 98.7 7.1E-08 2.4E-12 97.7 13.5 102 496-607 39-145 (316)
293 1k8k_C P40, ARP2/3 complex 41 98.7 2E-06 6.7E-11 88.2 24.6 156 147-329 11-170 (372)
294 1ex9_A Lactonizing lipase; alp 98.7 3E-08 1E-12 99.0 10.3 101 494-609 6-110 (285)
295 3mkq_A Coatomer beta'-subunit; 98.7 4.3E-07 1.5E-11 104.1 21.6 239 147-435 16-261 (814)
296 3fla_A RIFR; alpha-beta hydrol 98.7 5.4E-08 1.8E-12 95.2 12.0 104 492-608 17-125 (267)
297 1m33_A BIOH protein; alpha-bet 98.7 3E-08 1E-12 96.9 10.1 93 497-607 15-108 (258)
298 1bu8_A Protein (pancreatic lip 98.7 9.4E-09 3.2E-13 109.2 6.9 111 493-608 68-181 (452)
299 3b12_A Fluoroacetate dehalogen 98.2 1.3E-09 4.4E-14 108.7 0.0 108 495-610 25-133 (304)
300 1r5m_A SIR4-interacting protei 98.7 1.1E-06 3.8E-11 91.7 22.4 240 90-392 110-363 (425)
301 1nr0_A Actin interacting prote 98.7 6.1E-06 2.1E-10 91.5 29.5 201 91-338 21-225 (611)
302 1gpl_A RP2 lipase; serine este 98.7 1E-08 3.5E-13 108.5 6.6 111 493-608 68-181 (432)
303 1ys1_X Lipase; CIS peptide Leu 98.7 3.3E-08 1.1E-12 100.2 10.1 104 493-608 6-114 (320)
304 3fm0_A Protein CIAO1; WDR39,SG 98.7 2.5E-06 8.5E-11 87.3 23.9 198 149-388 21-225 (345)
305 2qmq_A Protein NDRG2, protein 98.7 5.7E-08 1.9E-12 96.4 11.2 123 471-608 19-146 (286)
306 3v64_C Agrin; beta propeller, 98.7 4.4E-06 1.5E-10 85.8 25.6 230 156-435 46-277 (349)
307 3ei3_B DNA damage-binding prot 98.7 8.4E-06 2.9E-10 84.3 27.8 205 89-336 74-284 (383)
308 3v64_C Agrin; beta propeller, 98.7 9.4E-07 3.2E-11 90.8 20.2 202 88-336 72-277 (349)
309 3qyj_A ALR0039 protein; alpha/ 98.7 1.3E-07 4.4E-12 94.6 13.2 102 496-606 26-129 (291)
310 1ijq_A LDL receptor, low-densi 98.7 8E-06 2.7E-10 82.6 26.7 230 156-435 3-240 (316)
311 4e54_B DNA damage-binding prot 98.7 1.2E-06 4.2E-11 92.7 21.6 206 90-336 121-329 (435)
312 1w52_X Pancreatic lipase relat 98.7 1.8E-08 6.2E-13 107.0 7.2 111 493-608 68-181 (452)
313 2vdu_B TRNA (guanine-N(7)-)-me 98.7 1.3E-06 4.6E-11 92.8 21.7 252 90-394 104-397 (450)
314 3fm0_A Protein CIAO1; WDR39,SG 98.7 1E-05 3.5E-10 82.7 27.6 198 90-330 18-223 (345)
315 2pm9_A Protein WEB1, protein t 98.7 9.4E-07 3.2E-11 92.3 20.1 295 90-435 14-339 (416)
316 3v65_B Low-density lipoprotein 98.7 2.5E-06 8.4E-11 89.0 23.0 189 154-388 127-316 (386)
317 4aez_A CDC20, WD repeat-contai 98.7 3.2E-06 1.1E-10 88.3 23.8 240 148-436 97-339 (401)
318 3icv_A Lipase B, CALB; circula 98.7 1.1E-07 3.8E-12 95.0 11.6 101 494-608 64-169 (316)
319 1ijq_A LDL receptor, low-densi 98.7 4.3E-06 1.5E-10 84.5 23.8 196 154-391 41-239 (316)
320 1vyh_C Platelet-activating fac 98.7 7.9E-06 2.7E-10 85.8 26.7 261 89-412 109-394 (410)
321 4h5i_A Guanine nucleotide-exch 98.7 9E-07 3.1E-11 91.5 19.1 198 149-387 138-342 (365)
322 3mkq_A Coatomer beta'-subunit; 98.7 2.7E-06 9.3E-11 97.4 24.9 263 88-412 13-284 (814)
323 3g02_A Epoxide hydrolase; alph 98.6 3.1E-07 1.1E-11 96.3 15.3 119 471-607 93-219 (408)
324 3frx_A Guanine nucleotide-bind 98.6 9.5E-06 3.3E-10 81.9 25.8 205 89-338 18-231 (319)
325 1vyh_C Platelet-activating fac 98.6 2.9E-06 9.8E-11 89.2 22.6 249 147-435 111-371 (410)
326 1k8k_C P40, ARP2/3 complex 41 98.6 8.2E-06 2.8E-10 83.5 25.5 242 89-388 9-274 (372)
327 2x5x_A PHB depolymerase PHAZ7; 98.6 8.3E-08 2.8E-12 97.7 10.1 110 493-609 39-166 (342)
328 1sq9_A Antiviral protein SKI8; 98.6 4.4E-06 1.5E-10 86.6 23.6 242 147-436 19-325 (397)
329 3qmv_A Thioesterase, REDJ; alp 98.6 2.8E-08 9.5E-13 98.6 6.2 92 495-599 51-144 (280)
330 1erj_A Transcriptional repress 98.6 2.3E-05 7.9E-10 81.6 28.5 149 148-329 127-284 (393)
331 1r5m_A SIR4-interacting protei 98.6 5E-06 1.7E-10 86.6 23.4 242 146-435 47-321 (425)
332 3p5b_L Low density lipoprotein 98.6 5.3E-06 1.8E-10 86.8 23.4 196 154-391 123-321 (400)
333 3p5b_L Low density lipoprotein 98.6 8E-06 2.7E-10 85.5 24.5 233 156-435 85-322 (400)
334 2pm9_A Protein WEB1, protein t 98.6 1.7E-06 5.6E-11 90.4 19.4 233 162-436 42-297 (416)
335 1yfq_A Cell cycle arrest prote 98.6 5.9E-06 2E-10 83.6 23.0 273 89-417 12-311 (342)
336 3sov_A LRP-6, low-density lipo 98.6 6.2E-06 2.1E-10 83.4 22.8 234 156-435 6-240 (318)
337 1sq9_A Antiviral protein SKI8; 98.6 1.2E-05 4.2E-10 83.2 25.8 154 156-338 82-271 (397)
338 2ynn_A Coatomer subunit beta'; 98.6 1.1E-05 3.8E-10 80.7 24.4 256 88-406 13-276 (304)
339 3sov_A LRP-6, low-density lipo 98.6 3.3E-06 1.1E-10 85.5 19.8 194 154-392 46-240 (318)
340 3jrp_A Fusion protein of prote 98.6 9.7E-06 3.3E-10 83.0 23.8 246 88-389 11-288 (379)
341 3dwl_C Actin-related protein 2 98.6 5.8E-07 2E-11 92.7 14.2 159 147-330 14-175 (377)
342 1got_B GT-beta; complex (GTP-b 98.6 1E-05 3.4E-10 82.5 23.3 156 150-337 149-304 (340)
343 3dr2_A Exported gluconolactona 98.5 1.4E-06 4.9E-11 87.4 16.6 211 178-435 36-269 (305)
344 1qks_A Cytochrome CD1 nitrite 98.5 2.3E-05 8E-10 85.6 27.4 247 149-434 201-478 (567)
345 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 7E-06 2.4E-10 82.2 21.5 260 88-390 17-299 (314)
346 1ycd_A Hypothetical 27.3 kDa p 98.5 1.5E-08 5.3E-13 98.2 1.6 117 493-609 3-144 (243)
347 3ei3_B DNA damage-binding prot 98.5 1.1E-05 3.7E-10 83.4 23.4 154 147-334 76-236 (383)
348 4h5i_A Guanine nucleotide-exch 98.5 3.9E-06 1.3E-10 86.7 19.7 160 147-331 179-342 (365)
349 3hrp_A Uncharacterized protein 98.5 2.1E-05 7.3E-10 82.5 25.5 209 150-397 136-361 (409)
350 3i2n_A WD repeat-containing pr 98.5 1.4E-05 4.7E-10 81.2 23.6 151 156-331 130-290 (357)
351 3jrp_A Fusion protein of prote 98.5 5.8E-06 2E-10 84.7 20.9 241 147-432 14-286 (379)
352 3dw8_B Serine/threonine-protei 98.5 2.6E-05 8.9E-10 82.1 26.3 119 192-334 179-315 (447)
353 2xyi_A Probable histone-bindin 98.5 8.5E-06 2.9E-10 86.1 22.4 257 86-387 126-409 (430)
354 2xzm_R RACK1; ribosome, transl 98.5 3.1E-05 1.1E-09 78.9 25.9 150 147-332 79-242 (343)
355 4f21_A Carboxylesterase/phosph 98.5 3.6E-07 1.2E-11 89.0 10.6 125 475-610 25-169 (246)
356 1pgu_A Actin interacting prote 98.5 2.3E-05 8E-10 86.1 26.7 284 89-435 19-330 (615)
357 1got_B GT-beta; complex (GTP-b 98.5 1.5E-05 5.1E-10 81.2 23.1 265 88-412 55-326 (340)
358 1rp1_A Pancreatic lipase relat 98.5 1.1E-07 3.7E-12 100.5 7.1 110 493-608 68-180 (450)
359 1erj_A Transcriptional repress 98.5 1.8E-05 6.2E-10 82.4 24.1 115 193-337 126-241 (393)
360 2hes_X YDR267CP; beta-propelle 98.5 2.9E-05 1E-09 78.7 25.1 202 147-387 17-229 (330)
361 1hpl_A Lipase; hydrolase(carbo 98.5 1.1E-07 3.7E-12 100.6 6.8 111 493-608 67-180 (449)
362 4fol_A FGH, S-formylglutathion 98.5 2.1E-07 7.3E-12 93.1 8.5 149 461-611 14-193 (299)
363 3hrp_A Uncharacterized protein 98.5 3.1E-05 1.1E-09 81.2 25.4 205 90-341 132-361 (409)
364 3s94_A LRP-6, low-density lipo 98.5 0.00012 4.2E-09 80.8 31.2 302 89-437 171-514 (619)
365 1nr0_A Actin interacting prote 98.5 1.7E-05 5.8E-10 87.9 24.3 235 150-435 24-272 (611)
366 3s94_A LRP-6, low-density lipo 98.5 4.3E-05 1.5E-09 84.5 27.1 206 88-337 39-246 (619)
367 3sfz_A APAF-1, apoptotic pepti 98.5 1.9E-06 6.5E-11 103.8 17.5 266 91-415 964-1235(1249)
368 3n2z_B Lysosomal Pro-X carboxy 98.5 2.3E-07 8E-12 97.7 8.2 111 495-607 39-160 (446)
369 2zyr_A Lipase, putative; fatty 98.5 1.2E-07 4.2E-12 99.8 5.8 113 493-609 20-167 (484)
370 3dm0_A Maltose-binding peripla 98.5 3.4E-05 1.2E-09 86.8 26.4 156 147-337 433-595 (694)
371 3bdv_A Uncharacterized protein 98.4 6.1E-07 2.1E-11 83.3 9.8 96 494-611 16-112 (191)
372 4a0p_A LRP6, LRP-6, low-densit 98.4 5.7E-05 2E-09 83.6 26.9 231 156-435 8-239 (628)
373 3m0c_C LDL receptor, low-densi 98.4 5.5E-05 1.9E-09 85.6 26.6 233 156-435 397-634 (791)
374 3dsm_A Uncharacterized protein 98.4 6.7E-05 2.3E-09 76.1 24.8 234 156-436 3-256 (328)
375 3k26_A Polycomb protein EED; W 98.4 3.8E-05 1.3E-09 78.1 23.0 104 156-283 86-193 (366)
376 2fp8_A Strictosidine synthase; 98.4 1.6E-05 5.3E-10 80.5 19.8 226 89-341 19-276 (322)
377 3m0c_C LDL receptor, low-densi 98.4 3.6E-05 1.2E-09 87.2 24.6 195 154-391 435-633 (791)
378 2xyi_A Probable histone-bindin 98.4 2.5E-05 8.6E-10 82.4 21.9 204 145-387 129-352 (430)
379 1n7d_A LDL receptor, low-densi 98.4 1.7E-06 5.7E-11 97.3 13.3 212 88-341 405-621 (699)
380 1pgu_A Actin interacting prote 98.4 1.7E-05 6E-10 87.1 21.2 201 191-435 19-240 (615)
381 2pbi_B Guanine nucleotide-bind 98.4 0.00019 6.5E-09 73.4 27.4 268 87-413 63-341 (354)
382 1ei9_A Palmitoyl protein thioe 98.4 1.4E-06 4.6E-11 86.6 10.7 105 495-607 6-115 (279)
383 3frx_A Guanine nucleotide-bind 98.4 8E-05 2.7E-09 75.0 24.2 243 89-387 66-316 (319)
384 2p4o_A Hypothetical protein; p 98.4 3.9E-05 1.4E-09 76.9 21.6 205 89-340 32-247 (306)
385 3dw8_B Serine/threonine-protei 98.4 1.8E-05 6.3E-10 83.3 19.9 159 147-336 31-260 (447)
386 4gga_A P55CDC, cell division c 98.3 7E-05 2.4E-09 78.6 24.1 239 149-435 110-355 (420)
387 2pbi_B Guanine nucleotide-bind 98.3 0.00011 3.7E-09 75.3 24.9 192 148-384 158-353 (354)
388 2mad_H Methylamine dehydrogena 98.3 0.00022 7.4E-09 73.8 27.3 204 149-395 129-355 (373)
389 2qe8_A Uncharacterized protein 98.3 3.5E-05 1.2E-09 78.7 20.9 221 89-341 17-285 (343)
390 4a11_B DNA excision repair pro 98.3 5.4E-05 1.8E-09 78.3 22.6 158 147-335 46-219 (408)
391 1yfq_A Cell cycle arrest prote 98.3 7.7E-06 2.6E-10 82.7 15.7 233 147-435 14-284 (342)
392 4aow_A Guanine nucleotide-bind 98.3 0.00024 8.4E-09 71.3 26.9 286 88-435 38-339 (340)
393 3dm0_A Maltose-binding peripla 98.3 5E-05 1.7E-09 85.4 23.9 240 147-436 385-635 (694)
394 1n7d_A LDL receptor, low-densi 98.3 3.2E-06 1.1E-10 95.0 13.8 196 154-393 417-617 (699)
395 2pm7_B Protein transport prote 98.3 0.00051 1.7E-08 68.2 28.7 256 90-395 11-291 (297)
396 2pm7_B Protein transport prote 98.3 0.00022 7.7E-09 70.8 26.0 202 148-388 13-238 (297)
397 2xzm_R RACK1; ribosome, transl 98.3 0.00024 8.3E-09 72.1 26.7 228 156-435 40-287 (343)
398 3sfz_A APAF-1, apoptotic pepti 98.3 0.00011 3.7E-09 88.4 27.9 246 147-435 618-873 (1249)
399 2ece_A 462AA long hypothetical 98.3 7.9E-05 2.7E-09 77.5 22.7 226 153-394 146-430 (462)
400 4a0p_A LRP6, LRP-6, low-densit 98.3 5.2E-05 1.8E-09 83.9 22.8 195 150-392 44-239 (628)
401 1rwi_B Serine/threonine-protei 98.3 7.9E-05 2.7E-09 72.6 21.9 198 149-396 28-228 (270)
402 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 4.9E-05 1.7E-09 75.9 20.8 242 149-433 22-299 (314)
403 1rwi_B Serine/threonine-protei 98.3 6.7E-05 2.3E-09 73.1 21.1 199 90-338 25-226 (270)
404 2fp8_A Strictosidine synthase; 98.3 6.5E-05 2.2E-09 75.8 21.6 242 150-434 24-314 (322)
405 3lrv_A PRE-mRNA-splicing facto 98.3 5.7E-05 2E-09 76.8 21.1 152 156-335 140-295 (343)
406 1mda_H Methylamine dehydrogena 98.3 6.7E-05 2.3E-09 77.2 21.6 256 155-436 32-349 (368)
407 3fle_A SE_1780 protein; struct 98.3 2.9E-06 9.9E-11 82.4 10.5 111 496-610 7-139 (249)
408 2ece_A 462AA long hypothetical 98.3 0.00037 1.3E-08 72.5 26.8 288 152-469 93-452 (462)
409 3dwl_C Actin-related protein 2 98.3 2.8E-06 9.5E-11 87.6 10.4 159 192-387 13-176 (377)
410 3f3f_A Nucleoporin SEH1; struc 98.3 0.00013 4.5E-09 73.1 22.8 205 88-331 11-248 (351)
411 4ggc_A P55CDC, cell division c 98.2 0.00026 9.1E-09 70.3 24.6 226 149-418 30-303 (318)
412 1q7f_A NHL, brain tumor CG1071 98.2 0.00012 4E-09 72.2 21.7 210 90-341 31-245 (286)
413 2dst_A Hypothetical protein TT 98.2 2.6E-06 8.9E-11 73.9 8.3 81 496-597 23-104 (131)
414 3k26_A Polycomb protein EED; W 98.2 4.3E-05 1.5E-09 77.7 18.5 151 156-336 35-194 (366)
415 1qks_A Cytochrome CD1 nitrite 98.2 5.9E-05 2E-09 82.4 20.4 235 156-433 168-421 (567)
416 3sjl_D Methylamine dehydrogena 98.2 5.7E-05 2E-09 77.8 18.9 130 198-338 40-173 (386)
417 3lcr_A Tautomycetin biosynthet 98.2 3.5E-06 1.2E-10 85.4 9.7 101 495-607 81-185 (319)
418 2z2n_A Virginiamycin B lyase; 98.2 0.00078 2.7E-08 66.2 26.6 276 89-435 15-297 (299)
419 3no2_A Uncharacterized protein 98.2 0.00029 9.8E-09 69.5 23.1 233 153-432 3-252 (276)
420 4e54_B DNA damage-binding prot 98.2 3.6E-05 1.2E-09 81.3 17.7 155 147-335 122-283 (435)
421 4a11_B DNA excision repair pro 98.2 0.00018 6.3E-09 74.2 22.9 210 89-336 44-278 (408)
422 3fvz_A Peptidyl-glycine alpha- 98.2 0.00015 5.1E-09 73.4 21.2 148 165-338 69-231 (329)
423 3ds8_A LIN2722 protein; unkonw 98.2 2.6E-06 8.8E-11 83.3 7.7 110 497-610 5-136 (254)
424 1kez_A Erythronolide synthase; 98.2 2.9E-06 1E-10 85.0 8.3 104 492-608 64-172 (300)
425 3f3f_A Nucleoporin SEH1; struc 98.2 0.00029 9.8E-09 70.6 23.2 205 147-387 14-248 (351)
426 4aow_A Guanine nucleotide-bind 98.2 0.0016 5.5E-08 65.2 28.7 238 147-435 41-288 (340)
427 2oiz_A Aromatic amine dehydrog 98.2 0.00039 1.3E-08 71.4 24.3 130 200-338 13-144 (361)
428 3nok_A Glutaminyl cyclase; bet 98.2 4.7E-05 1.6E-09 73.5 15.9 200 150-388 60-264 (268)
429 3c75_H MADH, methylamine dehyd 98.2 0.00036 1.2E-08 73.1 24.0 127 200-338 82-213 (426)
430 3lp5_A Putative cell surface h 98.2 5.7E-06 2E-10 80.4 9.5 109 497-609 6-139 (250)
431 4gga_A P55CDC, cell division c 98.1 0.0009 3.1E-08 70.0 27.1 239 147-433 150-395 (420)
432 3iz6_a 40S ribosomal protein R 98.1 0.00011 3.6E-09 76.1 19.2 242 147-435 69-331 (380)
433 2j04_A TAU60, YPL007P, hypothe 98.1 5.8E-05 2E-09 81.1 17.2 197 147-387 88-296 (588)
434 3odt_A Protein DOA1; ubiquitin 98.1 0.00016 5.6E-09 71.6 19.5 238 88-393 59-299 (313)
435 3v7d_B Cell division control p 98.1 0.0024 8.3E-08 67.4 29.8 216 156-419 218-452 (464)
436 2iwa_A Glutamine cyclotransfer 98.1 8.2E-05 2.8E-09 72.5 16.6 202 150-390 26-237 (266)
437 3lrv_A PRE-mRNA-splicing facto 98.1 0.00031 1.1E-08 71.3 21.6 187 164-395 103-299 (343)
438 3ils_A PKS, aflatoxin biosynth 98.1 1.2E-05 4E-10 79.0 10.4 98 494-607 20-122 (265)
439 3nol_A Glutamine cyclotransfer 98.1 0.00013 4.6E-09 70.3 17.3 200 151-388 49-254 (262)
440 2iwa_A Glutamine cyclotransfer 98.1 6.6E-05 2.3E-09 73.2 15.4 201 91-334 23-237 (266)
441 2qc5_A Streptogramin B lactona 98.1 0.0011 3.9E-08 65.0 24.9 272 89-432 20-299 (300)
442 3bg1_A Protein SEC13 homolog; 98.1 0.00011 3.7E-09 73.9 17.6 138 147-311 16-161 (316)
443 2p4o_A Hypothetical protein; p 98.1 0.00074 2.5E-08 67.5 23.7 223 150-418 37-277 (306)
444 3iz6_a 40S ribosomal protein R 98.1 0.00096 3.3E-08 68.8 25.1 290 88-434 66-376 (380)
445 3sre_A PON1, serum paraoxonase 98.1 6.6E-05 2.2E-09 76.5 15.6 155 156-333 128-297 (355)
446 2hih_A Lipase 46 kDa form; A1 98.0 1.5E-05 5.3E-10 83.3 10.8 108 495-608 52-212 (431)
447 3jro_A Fusion protein of prote 98.0 6E-05 2E-09 85.7 16.5 199 150-387 15-237 (753)
448 3vu4_A KMHSV2; beta-propeller 98.0 0.00015 5.1E-09 74.3 17.8 156 150-332 143-336 (355)
449 2dsn_A Thermostable lipase; T1 98.0 2E-05 6.9E-10 81.3 10.6 100 496-608 7-164 (387)
450 3nol_A Glutamine cyclotransfer 98.0 0.00014 4.9E-09 70.1 15.9 199 92-331 46-253 (262)
451 2hes_X YDR267CP; beta-propelle 98.0 0.0011 3.8E-08 66.8 23.5 158 147-331 61-229 (330)
452 2k2q_B Surfactin synthetase th 98.0 2.9E-06 9.8E-11 81.9 3.7 84 494-592 12-96 (242)
453 3v7d_B Cell division control p 98.0 0.00098 3.3E-08 70.5 23.9 235 147-436 165-424 (464)
454 1q7f_A NHL, brain tumor CG1071 97.9 0.0018 6.2E-08 63.5 23.5 208 149-398 34-246 (286)
455 3mmy_A MRNA export factor; mRN 97.9 0.0004 1.4E-08 70.3 18.8 114 147-284 42-162 (368)
456 2oaj_A Protein SNI1; WD40 repe 97.9 0.00037 1.3E-08 80.8 19.9 157 147-339 20-187 (902)
457 3mbr_X Glutamine cyclotransfer 97.9 0.00046 1.6E-08 65.9 16.8 200 151-388 27-233 (243)
458 3bg1_A Protein SEC13 homolog; 97.9 0.00034 1.2E-08 70.2 16.9 252 89-395 14-299 (316)
459 3gre_A Serine/threonine-protei 97.9 0.00076 2.6E-08 70.7 20.2 161 147-338 66-249 (437)
460 3gre_A Serine/threonine-protei 97.9 0.0029 9.8E-08 66.2 24.6 212 88-339 63-297 (437)
461 3jro_A Fusion protein of prote 97.9 0.00026 8.8E-09 80.5 17.4 205 88-335 9-239 (753)
462 2z2n_A Virginiamycin B lyase; 97.8 0.0039 1.3E-07 61.1 23.6 229 149-432 19-254 (299)
463 3qqz_A Putative uncharacterize 97.8 0.0058 2E-07 59.0 23.6 206 192-432 28-252 (255)
464 3vu4_A KMHSV2; beta-propeller 97.8 0.0011 3.7E-08 67.7 19.4 77 239-330 191-269 (355)
465 3odt_A Protein DOA1; ubiquitin 97.8 0.002 6.8E-08 63.6 20.8 225 154-436 28-258 (313)
466 1fwx_A Nitrous oxide reductase 97.8 0.0013 4.5E-08 70.8 20.3 160 156-335 103-309 (595)
467 2qc5_A Streptogramin B lactona 97.8 0.0033 1.1E-07 61.6 22.2 198 90-340 63-265 (300)
468 3tej_A Enterobactin synthase c 97.8 0.00011 3.9E-09 74.4 11.2 100 496-610 102-206 (329)
469 3fvz_A Peptidyl-glycine alpha- 97.7 0.007 2.4E-07 60.9 24.4 205 149-390 95-322 (329)
470 3tc9_A Hypothetical hydrolase; 97.7 0.0022 7.5E-08 67.5 21.1 158 149-334 141-301 (430)
471 3nok_A Glutaminyl cyclase; bet 97.7 0.00062 2.1E-08 65.7 15.0 195 92-332 58-264 (268)
472 3kya_A Putative phosphatase; s 97.7 0.0013 4.4E-08 69.8 18.4 163 155-334 152-341 (496)
473 3mbr_X Glutamine cyclotransfer 97.7 0.0067 2.3E-07 57.8 21.5 195 192-433 22-235 (243)
474 4hw6_A Hypothetical protein, I 97.7 0.0058 2E-07 64.3 23.3 157 149-333 143-303 (433)
475 3mmy_A MRNA export factor; mRN 97.7 0.0018 6.1E-08 65.4 18.6 156 87-283 38-200 (368)
476 2j04_A TAU60, YPL007P, hypothe 97.6 0.0019 6.5E-08 69.5 18.5 198 88-331 85-296 (588)
477 1whs_A Serine carboxypeptidase 97.6 0.00042 1.4E-08 66.6 11.7 141 463-612 23-190 (255)
478 2cb9_A Fengycin synthetase; th 97.6 0.00028 9.7E-09 68.1 10.6 89 495-607 22-114 (244)
479 2oaj_A Protein SNI1; WD40 repe 97.6 0.0026 9E-08 73.6 20.1 199 193-436 20-245 (902)
480 4ggc_A P55CDC, cell division c 97.5 0.01 3.5E-07 58.5 21.9 241 90-386 69-313 (318)
481 1jmk_C SRFTE, surfactin synthe 97.5 0.00027 9.1E-09 67.3 9.6 87 496-607 18-108 (230)
482 3das_A Putative oxidoreductase 97.5 0.0028 9.6E-08 64.2 16.7 252 47-333 1-347 (347)
483 1kb0_A Quinohemoprotein alcoho 97.5 0.038 1.3E-06 61.7 27.6 85 194-285 246-349 (677)
484 2qe8_A Uncharacterized protein 97.5 0.0015 5.2E-08 66.4 14.7 202 89-320 67-310 (343)
485 3tjm_A Fatty acid synthase; th 97.5 0.00027 9.2E-09 69.9 8.7 93 495-607 24-123 (283)
486 1ivy_A Human protective protei 97.4 0.0004 1.4E-08 73.1 10.2 134 466-612 26-185 (452)
487 3no2_A Uncharacterized protein 97.4 0.008 2.7E-07 59.0 19.2 182 221-436 15-198 (276)
488 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.088 3E-06 54.9 27.4 228 147-436 162-394 (445)
489 2hfk_A Pikromycin, type I poly 97.3 0.00069 2.4E-08 68.2 10.2 104 497-607 91-199 (319)
490 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.039 1.3E-06 57.7 24.3 233 147-433 202-442 (445)
491 3hxj_A Pyrrolo-quinoline quino 97.3 0.018 6.1E-07 57.3 20.6 187 152-397 105-291 (330)
492 2oit_A Nucleoporin 214KDA; NH2 97.3 0.003 1E-07 66.5 15.3 164 147-334 95-278 (434)
493 3tc9_A Hypothetical hydrolase; 97.3 0.0076 2.6E-07 63.3 18.0 160 194-390 140-301 (430)
494 1mda_H Methylamine dehydrogena 97.3 0.0024 8.2E-08 65.5 13.6 180 222-435 47-242 (368)
495 2j04_B YDR362CP, TAU91; beta p 97.3 0.0041 1.4E-07 67.2 16.0 150 147-328 269-424 (524)
496 1kb0_A Quinohemoprotein alcoho 97.3 0.27 9.2E-06 54.7 31.1 52 381-436 457-510 (677)
497 4gq1_A NUP37; propeller, trans 97.2 0.0061 2.1E-07 63.1 16.2 65 155-232 156-220 (393)
498 2oit_A Nucleoporin 214KDA; NH2 97.2 0.0021 7.1E-08 67.8 12.5 119 192-333 94-222 (434)
499 2ad6_A Methanol dehydrogenase 97.2 0.16 5.6E-06 55.2 27.9 82 196-284 240-337 (571)
500 4gq1_A NUP37; propeller, trans 97.2 0.0076 2.6E-07 62.3 16.3 107 156-283 102-219 (393)
No 1
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=2.8e-59 Score=529.39 Aligned_cols=527 Identities=32% Similarity=0.598 Sum_probs=437.3
Q ss_pred cccCCCCCCCcCCHHHHhccCCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCC
Q 006979 68 ITAPYGSWKSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG 147 (623)
Q Consensus 68 ~~~~~g~w~s~~t~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~ 147 (623)
+++|||+|+|||+++.+......+..+.++ ++.++|+..++.++++..||....+ ++.+.++....++++++++|++
T Consensus 3 ~~~~~g~w~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ 79 (662)
T 3azo_A 3 STAPYGAWQSPIDAALVASRSGRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRAD--GAEESALPAPWNVRNRVFEYSG 79 (662)
T ss_dssp EECCTTCCCCSCCHHHHHHTCSCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTT--SCEEESSCTTCCBCCCGGGTCC
T ss_pred ccCCCcCCCCCCCHHHHhhcCCccceeEEc-CCeEEEEecCcccCCcEEEEEECCC--CCcceeCCCCccccccccccCC
Confidence 689999999999999999988889999999 8899999998888899999987433 5678888877788899999999
Q ss_pred ceEEEe--CC--E-EEEEeCCCCcEEEEeCC--C-CCCCceecCCCCC-CCCeeecceeeCCCCCEEEEEEeccCC-CCC
Q 006979 148 GAFRIF--GD--T-VIFSNYKDQRLYKHSID--S-KDSSPLPITPDYG-EPLVSYADGIFDPRFNRYVTVREDRRQ-DAL 217 (623)
Q Consensus 148 ~~~~~s--~d--~-l~f~~~~~~~l~~~d~~--~-g~~~~~~Lt~~~~-~~~~~~~d~~~sPdG~~l~~v~~~~~~-~~~ 217 (623)
..+.++ +| . |+|+...+.+||+++++ + + ..++|+.... ....++.+++|||||++|+++++++.. .+.
T Consensus 80 ~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~--~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~ 157 (662)
T 3azo_A 80 FPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA--VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPS 157 (662)
T ss_dssp CCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC--CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTT
T ss_pred ccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC--CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCC
Confidence 888666 44 7 89998777789999998 5 6 6888887310 014577889999999999999876421 112
Q ss_pred CceeEEEEEEcCC------CCcccceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCcee-ee
Q 006979 218 NSTTEIVAIALNG------QNIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY-KR 289 (623)
Q Consensus 218 ~~~~~L~~idl~~------g~~~~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~-~~ 289 (623)
....+||++|+++ ++ .++|+ .+..++..|+|||||++|+|.+++++.++|...+||++|+++.+.+. ..
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSA---VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGG---SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred CceeEEEEEECCCCccccCCc---eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 2457899999998 66 77888 77778888999999999999999999999999999999998433111 23
Q ss_pred EEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCC
Q 006979 290 VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKN 369 (623)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~ 369 (623)
.+..+.. ..+..+.|+|||+++|.++. .+..+||++|+++++.+.++.....+..+.|+++...+.+. +++
T Consensus 235 ~l~~~~~----~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~----~~~ 305 (662)
T 3azo_A 235 TLLGGPE----EAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL----ANG 305 (662)
T ss_dssp EEEEETT----BCEEEEEECTTSCEEEEECT-TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC----TTS
T ss_pred EeCCCCC----ceEcceEECCCCeEEEEECC-CCCeEEEEEECCCCceeecccccccccCccccccCceEeEe----CCC
Confidence 3333323 45678999999998888887 67889999999888888888777777789999888888887 556
Q ss_pred EEEEEEEECCeEEEEEEeCCCCceeecccCCcceEee-eecCCEEEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccC
Q 006979 370 LIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSS 448 (623)
Q Consensus 370 ~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~~-~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~ 448 (623)
.++++..+ +..+||++|++++++++|+.+...+..+ +.+++.++++.++...+..||++++++++.++|+ ..
T Consensus 306 ~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~------~~ 378 (662)
T 3azo_A 306 LIAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG------AR 378 (662)
T ss_dssp CEEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE------SC
T ss_pred EEEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee------cC
Confidence 67777777 9999999999999999998776667777 8889999999999999999999999998865543 22
Q ss_pred CCCccCCCCCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEE
Q 006979 449 PDTLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFV 528 (623)
Q Consensus 449 ~~~~~~~~~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~ 528 (623)
....+++..++.++.+.++.. +|..++++++.|++.++..++++++|+||++||++.......|...++.|+++||+|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~ 457 (662)
T 3azo_A 379 HTDPVDPAYYPEPQIRTFTAP-DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVA 457 (662)
T ss_dssp CCCSSCGGGSCCCEEEEEECT-TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEE
T ss_pred CcccCCccccCcceEEEEEcC-CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEE
Confidence 223456667788999999987 8999999999998732222236788999999999877766788889999999999999
Q ss_pred EECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCC
Q 006979 529 DVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVS 608 (623)
Q Consensus 529 ~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~ 608 (623)
.+|+||++++|+++.+...+.++..+++|+.+++++|++++.+|++||+|+|+|+||++++.++.+|++|+|+|+.+|+.
T Consensus 458 ~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~~~~~~~~v~~~~~~ 537 (662)
T 3azo_A 458 DVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVSTDVYACGTVLYPVL 537 (662)
T ss_dssp EEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCCCCSEEEEESCCC
T ss_pred EECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhCcCceEEEEecCCcc
Confidence 99999999999999988888898889999999999999999999999999999999999999886699999999999999
Q ss_pred CHHHhhh-hccc
Q 006979 609 IPVIISE-ELWS 619 (623)
Q Consensus 609 d~~~~~~-~~~~ 619 (623)
|+..+.. .+++
T Consensus 538 ~~~~~~~~~~~~ 549 (662)
T 3azo_A 538 DLLGWADGGTHD 549 (662)
T ss_dssp CHHHHHTTCSCG
T ss_pred CHHHHhcccccc
Confidence 9987765 3443
No 2
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=2.4e-43 Score=403.10 Aligned_cols=464 Identities=13% Similarity=0.067 Sum_probs=338.6
Q ss_pred CCcEEEEeecCCCCCceEEEEcCCC--CCC--CCcccCCCCCccceeeeec-CCceEEEe-CC--EEEEEeCCCC----c
Q 006979 99 HGRLIWLESRPTEAGRGVLVKEPAK--AGD--EPSDITPKEYAVRTTAQEY-GGGAFRIF-GD--TVIFSNYKDQ----R 166 (623)
Q Consensus 99 ~~~~~~l~~~~~e~g~~~l~~~~~~--~gg--~~~~l~p~~~~~r~~~~~~-g~~~~~~s-~d--~l~f~~~~~~----~ 166 (623)
|+.+||....+. +.+..|++.+.. .++ ..+.+++ . |.....++| ..+.+.++ +| .|+|+....| +
T Consensus 126 g~~~yy~~~~~g-~~~~vl~r~~~~~~~~~~~~~~vlld-~-n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~ 202 (751)
T 2xe4_A 126 GKYRYYTREVKG-KPYKIYCRVFTDKEPGDVAAEEVIID-V-NQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYT 202 (751)
T ss_dssp TTEEEEEEECTT-CCSCEEEEEETTSCTTCTTTCEEEEE-H-HHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEE
T ss_pred CCEEEEEEECCC-CceeEEEEEcCCCCCCCCcCCEEEec-h-hHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEE
Confidence 889999876543 235667777641 222 2333332 2 333333343 45677888 66 6888866543 4
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc--cCCC
Q 006979 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV--SGSD 244 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~--~~~~ 244 (623)
||++|+++| .. .++.. -...+.++.|||||+.|+|++.+... ...+||++++.++..+ .+.+. .+..
T Consensus 203 l~v~dl~~g--~~-~l~~~---~~~~~~~~~WspDg~~l~y~~~d~~~----~~~~v~~~~lgt~~~~-~~lv~~~~~~~ 271 (751)
T 2xe4_A 203 IEFKRISDP--SQ-TIADK---VSGTNGEIVWGPDHTSLFYVTKDETL----RENKVWRHVMGKLQSE-DVCLYEEHNPL 271 (751)
T ss_dssp EEEEETTCT--TC-CCCCC---EEEECSCCEECSSTTEEEEEEECTTC----CEEEEEEEETTSCGGG-CEEEEECCCTT
T ss_pred EEEEECCCC--CE-eCCcc---ccCceeeEEEecCCCEEEEEEECCCC----CCCEEEEEECCCCchh-cEEEEecCCCc
Confidence 999999875 11 23221 02235679999999999999875422 2368999999887521 12332 2335
Q ss_pred cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeee--EEEcCCCCCccccCcCceeCCC---Cc-EEEEE
Q 006979 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR--VCVAGFDPTIVESPTEPKWSSK---GE-LFFVT 318 (623)
Q Consensus 245 ~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ws~D---G~-l~~~~ 318 (623)
+...+.|||||++|+|..++. ...+||++|++++.. .. +.+.... ..+.|++| |+ ++|.+
T Consensus 272 ~~~~~~~SpDg~~l~~~~~~~-----~~~~l~~~d~~~~~~--~~~~~~l~~~~-------~~~~~s~~~~~g~~l~~~t 337 (751)
T 2xe4_A 272 FSAFMYKAADTNTLCIGSQSP-----ETAEVHLLDLRKGNA--HNTLEIVRPRE-------KGVRYDVQMHGTSHLVILT 337 (751)
T ss_dssp CEEEEEECTTSSEEEEEEECS-----SCEEEEEEESSSCTT--CCCEEESSCCC-------TTCCEEEEEETTTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEecCC-----CCceEEEEECCCCCC--CceeEEeecCC-------CCceEEEeeeeCCEEEEEe
Confidence 677899999999999998654 367899999987521 22 3343322 13445554 66 99999
Q ss_pred eCC-CCeeeEEEEecCC-CeEEE-EeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeC-------
Q 006979 319 DRK-NGFWNLHKWIESN-NEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD------- 388 (623)
Q Consensus 319 ~~~-~g~~~L~~~d~~~-~~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~------- 388 (623)
+.. .++++|+++|+++ ++.+. |.++..+..-. .+.+ .++.|++...++|..+|+++++
T Consensus 338 ~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~-------~~~~-----~~~~lv~~~~~~g~~~l~~~dl~~~~~~~ 405 (751)
T 2xe4_A 338 NEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFME-------SIAV-----RSNYLVVAGRRAGLTRIWTMMADSQDGVF 405 (751)
T ss_dssp CTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEE-------EEEE-----CSSEEEEEEEETTEEEEEEEECCTTTSCC
T ss_pred CCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEE-------EEEE-----ECCEEEEEEEeCCEEEEEEEecccccccc
Confidence 873 4678999999876 45555 55443222111 1222 5678999999999999999996
Q ss_pred CCCc-eeecccCCcc-eEee------eecCCEEEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCCC-ccCCCCCC
Q 006979 389 FGHS-LSLLDIPFTD-IDNI------TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDT-LKYKSYFS 459 (623)
Q Consensus 389 ~~~~-~~~lt~~~~~-v~~~------~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~~-~~~~~~~~ 459 (623)
++++ .+.|+.+... +..+ +.+++.+++..++...|+.+|.+++++++.+.|+ ..... .+++..+
T Consensus 406 ~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~------~~~~~~~~~~~~~- 478 (751)
T 2xe4_A 406 KAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK------VREVGGGFDAANY- 478 (751)
T ss_dssp CTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE------ECCCCTTCCGGGE-
T ss_pred cCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe------ccccccCCCccce-
Confidence 6677 7777655432 2334 2467889999999999999999999988765544 22111 2444444
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
.++.+.+++. ||..|+++++.|++ ++. +++.|+||++|||+.....+.|....+.|+++||+|+.+|+||++++|
T Consensus 479 ~~~~~~~~s~-dG~~i~~~l~~p~~--~~~--~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G 553 (751)
T 2xe4_A 479 KVERRFATAP-DQTKIPLSVVYHKD--LDM--SQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELG 553 (751)
T ss_dssp EEEEEEEECT-TCCEEEEEEEEETT--SCT--TSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTC
T ss_pred EEEEEEEECC-CCcEEEEEEEcCCC--CCC--CCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcC
Confidence 4789999998 99999999999987 222 567899999999988777778888889999999999999999999999
Q ss_pred hhHHH-hhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhh
Q 006979 540 REFRE-RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 540 ~~~~~-~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~ 614 (623)
+.|.+ .....++...++|++++++||++++++|++||+|+|+|+||+++++++ .+|++|+|+|+.+|+.|+..+.
T Consensus 554 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~ 630 (751)
T 2xe4_A 554 RAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTM 630 (751)
T ss_dssp THHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHH
T ss_pred cchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhh
Confidence 99998 777778888999999999999999999999999999999999999999 7799999999999999998764
No 3
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=2.5e-42 Score=392.16 Aligned_cols=464 Identities=13% Similarity=0.134 Sum_probs=343.3
Q ss_pred CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCC-CCCccceeeeecCCceEEEeCC--EEEEEeCCCC----cEEEEe
Q 006979 99 HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITP-KEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQ----RLYKHS 171 (623)
Q Consensus 99 ~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p-~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~----~l~~~d 171 (623)
|+.+||....+. +.+..+||.... ++.+.+++ ...... +.+..+.+.+++| .++|+....| .|+++|
T Consensus 88 g~~~y~~~~~~~-~~~~~~~r~~~~--~~~~vllD~n~la~~---~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~d 161 (693)
T 3iuj_A 88 GRYHYFFKNDGL-QNQNVLWRQQEG--KPAEVFLDPNTLSPD---GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMD 161 (693)
T ss_dssp TTEEEEEEECSS-CSSCEEEEECTT--SCCEEEECGGGGSTT---SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEE
T ss_pred CCEEEEEEEcCC-CceeEEEEeCCC--CCcEEEEehhhccCC---CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEE
Confidence 888888876543 455678886543 23444443 222111 1223445677776 6888764443 599999
Q ss_pred CCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCC----CCCCceeEEEEEEcCCCCcccceecccCC----
Q 006979 172 IDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ----DALNSTTEIVAIALNGQNIQEPKVLVSGS---- 243 (623)
Q Consensus 172 ~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~----~~~~~~~~L~~idl~~g~~~~~~~l~~~~---- 243 (623)
+++| +....+.. ...+..++|+ ||+.|+|++.+... .......+||++++.++..+ .+.+....
T Consensus 162 l~tg--~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-~~~v~~~~~~~~ 233 (693)
T 3iuj_A 162 VESK--QPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED-DRLVFGAIPAQH 233 (693)
T ss_dssp TTTC--SEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG-CEEEESCSGGGC
T ss_pred CCCC--CCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc-ceEEEecCCCCC
Confidence 9988 54444321 2335788999 99999999876420 00123477999999876522 23444333
Q ss_pred CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCC
Q 006979 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKN 322 (623)
Q Consensus 244 ~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~ 322 (623)
.+...+.|||||++|++...... ...+||++|++++.. ....+....+ ....+ |+++|+ ++|.++...
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~~~~~-~~~~l~~~~~-----~~~~~-~~~~g~~l~~~t~~~~ 302 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANST----SGNRLYVKDLSQENA-PLLTVQGDLD-----ADVSL-VDNKGSTLYLLTNRDA 302 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESSS----SCCEEEEEETTSTTC-CCEEEECSSS-----SCEEE-EEEETTEEEEEECTTC
T ss_pred eEEEEEEEcCCCCEEEEEEccCC----CCcEEEEEECCCCCC-ceEEEeCCCC-----ceEEE-EeccCCEEEEEECCCC
Confidence 35667899999999998875443 246899999976632 1233333322 12223 778877 888888744
Q ss_pred CeeeEEEEecCCCeE---EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccC
Q 006979 323 GFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP 399 (623)
Q Consensus 323 g~~~L~~~d~~~~~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~ 399 (623)
...+|+++|+++++. +.++++..... .|++ +++.|++...++|..+|++++++++..+.|+.+
T Consensus 303 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~------------~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 303 PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS------------GSGYLFAEYMVDATARVEQFDYEGKRVREVALP 368 (693)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE------------ETTEEEEEEEETTEEEEEEECTTSCEEEEECCS
T ss_pred CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE------------ECCEEEEEEEECCeeEEEEEECCCCeeEEeecC
Confidence 467999999987654 67776533221 3332 788999999999999999999998888888765
Q ss_pred Cc-ceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCCCccCCCCCCCcEEEEeecCCCCeEEE
Q 006979 400 FT-DIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPGQKAY 476 (623)
Q Consensus 400 ~~-~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~dg~~i~ 476 (623)
.. .+..+ +++++.+++..++..+|..||.+++++++.+.|+ ... ..+++..+ ..+.+.+++. +|..|+
T Consensus 369 ~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~------~~~-~~~~~~~~-~~~~~~~~~~-dg~~i~ 439 (693)
T 3iuj_A 369 GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR------ASA-APFKPEDY-VSEQRFYQSK-DGTRVP 439 (693)
T ss_dssp SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE------CCC-SSCCGGGE-EEEEEEEECT-TSCEEE
T ss_pred CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE------eCC-CCcChhhC-eeEEEEEecC-CCcEEE
Confidence 43 34444 5678899999999999999999999888754443 222 23455444 6789999998 999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHH
Q 006979 477 AYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVN 556 (623)
Q Consensus 477 ~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~ 556 (623)
++++.|++. .. +++.|+||++|||++....+.|....+.|+++||+|+.+|+||++++|+.|.+.....++...++
T Consensus 440 ~~l~~p~~~--~~--~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 515 (693)
T 3iuj_A 440 LIISYRKGL--KL--DGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFD 515 (693)
T ss_dssp EEEEEESSC--CC--SSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred EEEEecCCC--CC--CCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHH
Confidence 999999872 22 56789999999998887888888888999999999999999999999999999888888888899
Q ss_pred HHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhh
Q 006979 557 DCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 557 D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~ 614 (623)
|+.++++||++++.+|++||+|+|+|+||++++.++ .+|++|+|+|+.+|+.|+..+.
T Consensus 516 D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~ 574 (693)
T 3iuj_A 516 DFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH 574 (693)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG
T ss_pred HHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc
Confidence 999999999999999999999999999999999999 7899999999999999987653
No 4
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=7.4e-42 Score=389.83 Aligned_cols=470 Identities=13% Similarity=0.115 Sum_probs=342.1
Q ss_pred C-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCC-CCccceeeeecCCceEEEeCC--EEEEEeCCCC----cEEE
Q 006979 98 G-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPK-EYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQ----RLYK 169 (623)
Q Consensus 98 ~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~-~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~----~l~~ 169 (623)
| |+.+||+..... +.+..||+.+..+ ++.+.++.. ..... +.+....+.+++| .|+|.....| +|++
T Consensus 81 ~dG~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~lld~~~l~~~---~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKGKRYFYFYNTGL-QNQRVLYVQDSLE-GEARVFLDPNILSDD---GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EETTEEEEEEECSS-CSSCEEEEESSTT-SCCEEEECGGGGCTT---SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEE
T ss_pred EECCEEEEEEEcCC-ceEEEEEEEcCCC-CCcEEEECHHHhccC---CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 5 899999876542 3455789887653 345544432 11110 1112345667766 7877755443 6999
Q ss_pred EeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCC-------CCCceeEEEEEEcCCCCcccceecccC
Q 006979 170 HSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-------ALNSTTEIVAIALNGQNIQEPKVLVSG 242 (623)
Q Consensus 170 ~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~-------~~~~~~~L~~idl~~g~~~~~~~l~~~ 242 (623)
+|++++ ...+++.. ...+..+.|||||+.|+|++.+.... ......+||++++.++..+. +.+...
T Consensus 156 ~d~~tg--~~~~~~~~----~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~~~ 228 (710)
T 2xdw_A 156 MKVDGA--KELPDVLE----RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCAEF 228 (710)
T ss_dssp EETTTT--EEEEEEEE----EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEECC
T ss_pred EECCCC--CCCccccc----CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEecc
Confidence 999987 55554432 23356799999999999998764310 01234679999998875211 233232
Q ss_pred ---CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecC------CCceeeeEEEcCCCCCccccCcCceeCCCCc
Q 006979 243 ---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE------NGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (623)
Q Consensus 243 ---~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~ 313 (623)
..+...+.|||||++|++...+... ...+||++|+++ +.. ....+....+ . ....|++||+
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~-----~-~~~~~s~dg~ 298 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQQESNGITGIL-KWVKLIDNFE-----G-EYDYVTNEGT 298 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGGGSSSSSCSSC-CCEEEECSSS-----S-CEEEEEEETT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECcccccccCCcc-ceEEeeCCCC-----c-EEEEEeccCC
Confidence 3345678999999999998854321 156899999986 321 1233333322 1 2346899998
Q ss_pred -EEEEEeCCCCeeeEEEEecCCCe---EEEEeeccc--ccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 314 -LFFVTDRKNGFWNLHKWIESNNE---VLAIYSLDA--EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 314 -l~~~~~~~~g~~~L~~~d~~~~~---~~~l~~~~~--~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
++|.++......+|+++|+++++ .+.|+++.. .+. .+.+. +++.++++..+++..+|++++
T Consensus 299 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~---------~~~~~----~~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 299 VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLE---------WVACV----RSNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEE---------EEEEE----TTTEEEEEEEETTEEEEEEEE
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEE---------EEEEE----cCCEEEEEEEECCEEEEEEEE
Confidence 88888764447789999998764 466665422 122 23333 578899999999999999999
Q ss_pred CCCC-ceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc--ceeeeeEEEeccCCCCccCCCCCCCcE
Q 006979 388 DFGH-SLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK--LKAVDFKVVWSSSPDTLKYKSYFSLPE 462 (623)
Q Consensus 388 ~~~~-~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~--~~~lt~~~~~~~~~~~~~~~~~~~~~~ 462 (623)
+.+| ..+.|+.+...+..+ +++++.+++..++...|..+|.+++++++ .+.++ ......++...+ .++
T Consensus 366 ~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~------~~~~~~~~~~~~-~~~ 438 (710)
T 2xdw_A 366 LATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFR------EVTVKGIDASDY-QTV 438 (710)
T ss_dssp TTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEE------ECCCTTCCGGGE-EEE
T ss_pred CCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEee------ecccCCcCcccc-EEE
Confidence 8544 467787765555555 56788999999999999999999999887 44433 222112444443 678
Q ss_pred EEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHc-CceEEEEECCCCCCCCchh
Q 006979 463 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGRE 541 (623)
Q Consensus 463 ~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~-~G~~v~~~d~rGs~~~g~~ 541 (623)
.+.+++. +|..|+++++.|++ +.. +++.|+||++|||+.......|....+.|++ +||+|+++|+||++++|+.
T Consensus 439 ~~~~~~~-dg~~i~~~~~~p~~--~~~--~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~ 513 (710)
T 2xdw_A 439 QIFYPSK-DGTKIPMFIVHKKG--IKL--DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGET 513 (710)
T ss_dssp EEEEECT-TSCEEEEEEEEETT--CCC--SSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred EEEEEcC-CCCEEEEEEEecCC--CCC--CCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChH
Confidence 9999998 99999999999987 222 5678999999999887777778887788888 9999999999999999999
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhh
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~ 614 (623)
|.+.....++...++|+.+++++|++++++|++||+|+|+|+||++++.++ .+|++|+|+|+.+|+.|+..+.
T Consensus 514 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~ 587 (710)
T 2xdw_A 514 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFH 587 (710)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG
T ss_pred HHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcc
Confidence 998877778888899999999999999999999999999999999999999 7899999999999999986653
No 5
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=4e-42 Score=393.78 Aligned_cols=477 Identities=13% Similarity=0.082 Sum_probs=338.1
Q ss_pred CceEEcC-CCcEEEEeecCCC---CCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCC
Q 006979 92 GGTAVDG-HGRLIWLESRPTE---AGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQ 165 (623)
Q Consensus 92 ~~~~~~~-~~~~~~l~~~~~e---~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~ 165 (623)
..+.||| |+.|.+......- .....+|.++..+| +.+.++.... .....++++| .|+|+. ++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~-~~~~l~~~~~---------~~~~~~~SPdG~~la~~~--~~ 132 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-QLITEERIPN---------NTQWVTWSPVGHKLAYVW--NN 132 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-EECCSSCCCT---------TEEEEEECSSTTCEEEEE--TT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC-cEEEcccCCC---------cceeeEECCCCCEEEEEE--CC
Confidence 3478899 7878776542110 12245666666543 4444443220 1234455555 788884 46
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCC---------------eeecceeeCCCCCEEEEEEeccCCC---------------
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD--------------- 215 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~---------------~~~~d~~~sPdG~~l~~v~~~~~~~--------------- 215 (623)
.||++++.++ ..++||....... .+...+.|||||++|+|.+.+...-
T Consensus 133 ~i~~~~~~~~--~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~ 210 (740)
T 4a5s_A 133 DIYVKIEPNL--PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQY 210 (740)
T ss_dssp EEEEESSTTS--CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSS
T ss_pred eEEEEECCCC--ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCC
Confidence 7999999988 7888886421100 1123478999999999997654310
Q ss_pred ------------CCCceeEEEEEEcCC---CCcccceeccc------CCCcccceeeCCCCCEEEEEEecCCCCCCCceE
Q 006979 216 ------------ALNSTTEIVAIALNG---QNIQEPKVLVS------GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAE 274 (623)
Q Consensus 216 ------------~~~~~~~L~~idl~~---g~~~~~~~l~~------~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~ 274 (623)
.......|+++|+++ ++....+.+.. .......+.|||||+.+++...... +...
T Consensus 211 ~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~----~~~~ 286 (740)
T 4a5s_A 211 PKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ----NYSV 286 (740)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST----TEEE
T ss_pred CcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC----CEEE
Confidence 012345799999998 72101455543 3334567899999998877764433 3667
Q ss_pred EEEEEecCCC----ceeeeEEEcCCCCCcccc--CcCceeCCCCc-EE-EEEeCCCCeeeEEEEecCCCeEEEEeecccc
Q 006979 275 LWVGYISENG----DVYKRVCVAGFDPTIVES--PTEPKWSSKGE-LF-FVTDRKNGFWNLHKWIESNNEVLAIYSLDAE 346 (623)
Q Consensus 275 L~v~d~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~ws~DG~-l~-~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~ 346 (623)
|+++|++++. ......++......|... ...|.|+|||+ ++ +.+++ +|+.+||++|.++++.++|+.+..+
T Consensus 287 i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~-~G~~~l~~~~~~~~~~~~lT~g~~~ 365 (740)
T 4a5s_A 287 MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE-EGYRHICYFQIDKKDCTFITKGTWE 365 (740)
T ss_dssp EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT-TSCEEEEEEETTCSSCEESCCSSSC
T ss_pred EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC-CCceEEEEEECCCCceEecccCCEE
Confidence 9999998874 111122222222233321 34799999999 66 67776 8999999999999999999876555
Q ss_pred cccccccccCcceeEEeecCCCCEEEEEEEE----CCeEEEEEEeCCCCcee-ecccC----CcceE--eeeecCCEEEE
Q 006979 347 FSRPLWVFGINSYEIIQSHGEKNLIACSYRQ----NGRSYLGILDDFGHSLS-LLDIP----FTDID--NITLGNDCLFV 415 (623)
Q Consensus 347 ~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~----~g~~~L~~~d~~~~~~~-~lt~~----~~~v~--~~~~~~~~~~~ 415 (623)
+..+.+ . +++.|||++.+ .+..+||+++++++..+ +|+.. ...+. .++++++.+++
T Consensus 366 v~~~~~---------~----d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~ 432 (740)
T 4a5s_A 366 VIGIEA---------L----TSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQL 432 (740)
T ss_dssp EEEEEE---------E----CSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEE
T ss_pred EEEEEE---------E----eCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEE
Confidence 443211 1 78899999877 56889999999887765 77743 12233 33888998888
Q ss_pred EEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCC--CccCCCCCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCC
Q 006979 416 EGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPD--TLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEE 493 (623)
Q Consensus 416 ~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~ 493 (623)
..+++. ++.++++++++++..+ ++..+.. ..+....++.++.+.+ .. +|..++++++.|++ +++ .+
T Consensus 433 ~~s~~~-~p~~~l~~~~~~~~~~-----~l~~n~~~~~~~~~~~~~~~~~~~~-~~-dg~~l~~~~~~P~~--~~~--~~ 500 (740)
T 4a5s_A 433 RCSGPG-LPLYTLHSSVNDKGLR-----VLEDNSALDKMLQNVQMPSKKLDFI-IL-NETKFWYQMILPPH--FDK--SK 500 (740)
T ss_dssp EECSBS-SCEEEEEETTTTEEEE-----EEECCHHHHHHHTTEECCEEEEEEE-EE-TTEEEEEEEEECTT--CCT--TS
T ss_pred EeCCCC-CCEEEEEECCCCcEEE-----EeccChhhhhhhhhccCCccEEEEE-cc-CCeEEEEEEEeCCC--CCC--CC
Confidence 887776 7889999988776433 2333221 1233445667778888 55 89999999999987 443 67
Q ss_pred CCCEEEEecCCCCCccc-CcCC-HHhHHHH-cCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 494 KPPLLVKSHGGPTSEAR-GILN-LSIQYWT-SRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~-~~~~-~~~~~~a-~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
++|+||++||++..... ..+. ...++++ ++||+|+.+|+||++++|..+......+++..+++|+.+++++|.+++.
T Consensus 501 ~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 580 (740)
T 4a5s_A 501 KYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGF 580 (740)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTT
T ss_pred CccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCC
Confidence 89999999999876432 2332 2344555 6999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHH
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
+|++||+|+|+||||++++.++ .+|++|+|+|+.+|+.|+..
T Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~ 623 (740)
T 4a5s_A 581 VDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEY 623 (740)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGG
T ss_pred cCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHH
Confidence 9999999999999999999999 68999999999999999864
No 6
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.3e-41 Score=387.49 Aligned_cols=489 Identities=17% Similarity=0.176 Sum_probs=347.4
Q ss_pred CCcCCHHHHhcc----CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCC-c------------
Q 006979 76 KSPLTADVVSGA----SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEY-A------------ 137 (623)
Q Consensus 76 ~s~~t~~~~~~~----~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~-~------------ 137 (623)
..+||++.++.. ...+..+.||| |+.+++...+..+.....|+.++..+| +.+.++.... .
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 98 (741)
T 2ecf_A 20 AEKLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG-QTRLLVDSKVVLPGTETLSDEEKA 98 (741)
T ss_dssp --CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC-CEEEEECGGGTC------------
T ss_pred cccccHHHHhccCCcCCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC-ceeEccchhhcccccccccchhhh
Confidence 467999999852 34567899999 888888875332223556777776543 4444442110 0
Q ss_pred c--ceeeee-cCCceEEEeCC--EEEEEeCCCCcEEEEeCCCCCC--CceecCCCCCCCCeeecceeeCCCCCEEEEEEe
Q 006979 138 V--RTTAQE-YGGGAFRIFGD--TVIFSNYKDQRLYKHSIDSKDS--SPLPITPDYGEPLVSYADGIFDPRFNRYVTVRE 210 (623)
Q Consensus 138 ~--r~~~~~-~g~~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~--~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~ 210 (623)
. +.++.. .+...+++++| .|+|... +.||++|++++ . ..++++.. ......+.|||||++|+++..
T Consensus 99 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~-~~~~~~~l~~~----~~~~~~~~~SPDG~~la~~~~ 171 (741)
T 2ecf_A 99 RRERQRIAAMTGIVDYQWSPDAQRLLFPLG--GELYLYDLKQE-GKAAVRQLTHG----EGFATDAKLSPKGGFVSFIRG 171 (741)
T ss_dssp --------CCEESCCCEECTTSSEEEEEET--TEEEEEESSSC-STTSCCBCCCS----SSCEEEEEECTTSSEEEEEET
T ss_pred hhhhhhhccccCcceeEECCCCCEEEEEeC--CcEEEEECCCC-CcceEEEcccC----CcccccccCCCCCCEEEEEeC
Confidence 0 111100 12456677766 6777764 77999999865 2 34566653 344667899999999999864
Q ss_pred ccCCCCCCceeEEEEEEcCCCCcccceecccCCCc-----------------ccceeeCCCCCEEEEEEecCCCCC----
Q 006979 211 DRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF-----------------YAFPRMDPRGERMAWIEWHHPNMP---- 269 (623)
Q Consensus 211 ~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~-----------------~~~p~wSPDG~~la~~~~~~~~~p---- 269 (623)
.+|+++|+++++ .++++..... ...+.|||||++|+|...+....+
T Consensus 172 ----------~~i~~~d~~~g~---~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~ 238 (741)
T 2ecf_A 172 ----------RNLWVIDLASGR---QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKR 238 (741)
T ss_dssp ----------TEEEEEETTTTE---EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEE
T ss_pred ----------CcEEEEecCCCC---EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEec
Confidence 369999999987 6666543321 356899999999999976643211
Q ss_pred ---------------------CCceEEEEEEecC-CCce--e--------------------------------------
Q 006979 270 ---------------------WDKAELWVGYISE-NGDV--Y-------------------------------------- 287 (623)
Q Consensus 270 ---------------------~~~~~L~v~d~~~-~~~~--~-------------------------------------- 287 (623)
.....|+++|+++ +... .
T Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d 318 (741)
T 2ecf_A 239 YEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVT 318 (741)
T ss_dssp EEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEE
T ss_pred CCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEE
Confidence 1223677777665 3210 0
Q ss_pred -----eeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccc-cccccCcceeE
Q 006979 288 -----KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRP-LWVFGINSYEI 361 (623)
Q Consensus 288 -----~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~-~w~~~~~~~~~ 361 (623)
...++......|...+..+.|+|||++++.+.. +|..+||.+|.+++ .+.++.....+... .|+
T Consensus 319 ~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s-------- 388 (741)
T 2ecf_A 319 LASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSKGK-AAALTHGNWSVDELLAVD-------- 388 (741)
T ss_dssp TTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSSSC-EEESCCSSSCEEEEEEEE--------
T ss_pred CCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCCCC-eeeeeecceEEEeEeEEe--------
Confidence 000000000011113357899999997777776 78889999998766 67776554333322 233
Q ss_pred EeecCCCCEEEEEEEECC--eEEEEEEeCCCCceeecccCCcceEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCcce
Q 006979 362 IQSHGEKNLIACSYRQNG--RSYLGILDDFGHSLSLLDIPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 437 (623)
Q Consensus 362 l~~s~~~~~l~~~~~~~g--~~~L~~~d~~~~~~~~lt~~~~~v~~--~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~ 437 (623)
++++.++++...++ ..+||.++.+++..++|+... .+.. ++++++.+++..++...|+.+|+++++++..+
T Consensus 389 ----~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~-~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~ 463 (741)
T 2ecf_A 389 ----EKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAP-GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIA 463 (741)
T ss_dssp ----TTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSC-SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEE
T ss_pred ----CCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCC-CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEE
Confidence 38888998887766 788999998887788887633 3333 38899999999999999999999998776544
Q ss_pred eeeeEEEeccCCC---C-ccCCC--CCCCcEEEEeecCCCC-eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc
Q 006979 438 AVDFKVVWSSSPD---T-LKYKS--YFSLPELIEFPTEVPG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR 510 (623)
Q Consensus 438 ~lt~~~~~~~~~~---~-~~~~~--~~~~~~~i~~~~~~dg-~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~ 510 (623)
.|+ .+.. . .+.+. .+..++.+.+++. +| ..++++++.|.+ +++ +++.|+||++||++.....
T Consensus 464 ~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~~~~~~P~~--~~~--~~~~p~vv~~hG~~~~~~~ 532 (741)
T 2ecf_A 464 TLV------ENDLADPKHPYARYREAQRPVEFGTLTAA-DGKTPLNYSVIKPAG--FDP--AKRYPVAVYVYGGPASQTV 532 (741)
T ss_dssp CSS------CCCSSSTTSTTHHHHTTCCCEEEEEEECT-TSSCEEEEEEECCSS--CCT--TSCEEEEEECCCSTTCCSC
T ss_pred Eec------cCcccccccchhhhhccCCCcEEEEEEcC-CCCEEEEEEEEeCCC--CCC--CCCcCEEEEEcCCCCcccc
Confidence 433 2221 0 23333 5778899999987 89 899999999986 222 5678999999999766432
Q ss_pred -CcCC-----HHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChH
Q 006979 511 -GILN-----LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAG 584 (623)
Q Consensus 511 -~~~~-----~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~G 584 (623)
..|. ..++.|+++||+|+.+|+||.++++..+.......++..+++|+.+++++|.+++.+|++||+|+|||+|
T Consensus 533 ~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~G 612 (741)
T 2ecf_A 533 TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNG 612 (741)
T ss_dssp SSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred cccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChH
Confidence 2344 5789999999999999999999999999888888888889999999999999999899999999999999
Q ss_pred HHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 585 GYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 585 G~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
|++++.++ .+|++|+++|+.+|+.|+.
T Consensus 613 G~~a~~~a~~~p~~~~~~v~~~~~~~~~ 640 (741)
T 2ecf_A 613 GYMTLMLLAKASDSYACGVAGAPVTDWG 640 (741)
T ss_dssp HHHHHHHHHHCTTTCSEEEEESCCCCGG
T ss_pred HHHHHHHHHhCCCceEEEEEcCCCcchh
Confidence 99999998 7899999999999999865
No 7
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=4.5e-41 Score=382.32 Aligned_cols=473 Identities=15% Similarity=0.144 Sum_probs=340.3
Q ss_pred cCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCC-CccceeeeecCCceEEEeCC--EEEEEeCCC---
Q 006979 91 LGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YAVRTTAQEYGGGAFRIFGD--TVIFSNYKD--- 164 (623)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~-~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~--- 164 (623)
...+..+ |+.+||+..+.. +.+..||+.+..+ ++.+.++... .... +......+.+++| .|+|.....
T Consensus 72 ~~~p~~d-G~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~l~d~~~~a~~---~~~~~~~~~~SPDG~~la~~~~~~G~~ 145 (695)
T 2bkl_A 72 VSTPSRR-NGRFFYVRTHKD-KEKAILYWRQGES-GQEKVLLDPNGWSKD---GTVSLGTWAVSWDGKKVAFAQKPNAAD 145 (695)
T ss_dssp ECCCEEE-TTEEEEEEECTT-CSSCEEEEEESTT-SCCEEEECGGGSSSS---SCEEEEEEEECTTSSEEEEEEEETTCS
T ss_pred CCCCEEE-CCEEEEEEEcCC-CeEEEEEEEcCCC-CCcEEEEchHHhccC---CCEEEEEEEECCCCCEEEEEECCCCCc
Confidence 3344433 999999886653 3467789887543 3556665421 1110 1122445666766 778775443
Q ss_pred -CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCC----CCCceeEEEEEEcCCCCcccceec
Q 006979 165 -QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD----ALNSTTEIVAIALNGQNIQEPKVL 239 (623)
Q Consensus 165 -~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~----~~~~~~~L~~idl~~g~~~~~~~l 239 (623)
..|+++|+++| +..+.... ....+..+.|||||+.|+|++.+.... ......+||++++.++..+. +.+
T Consensus 146 ~~~i~v~dl~tg--~~~~~~~~---~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~lv 219 (695)
T 2bkl_A 146 EAVLHVIDVDSG--EWSKVDVI---EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD-TVV 219 (695)
T ss_dssp CCEEEEEETTTC--CBCSSCCB---SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-EEE
T ss_pred eEEEEEEECCCC--CCcCCccc---CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc-eEE
Confidence 36999999987 43311111 112236789999999999998754310 01234779999998875221 233
Q ss_pred ccC---CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEE
Q 006979 240 VSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 316 (623)
Q Consensus 240 ~~~---~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~ 316 (623)
... ..++..+.|||||++|++...+.. ...+||+++..++. ...+....+ ....+.| +||++++
T Consensus 220 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~~~~---~~~l~~~~~-----~~~~~~~-~~g~l~~ 286 (695)
T 2bkl_A 220 HERTGDPTTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPGEKD---FRLLVKGVG-----AKYEVHA-WKDRFYV 286 (695)
T ss_dssp ECCCCCTTCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTTCSS---CEEEEECSS-----CCEEEEE-ETTEEEE
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCCCCc---eEEeecCCC-----ceEEEEe-cCCcEEE
Confidence 332 235678999999999999986652 26789998765442 333333322 3345667 6766767
Q ss_pred EEeCCCCeeeEEEEecCCCe---EEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 317 VTDRKNGFWNLHKWIESNNE---VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 317 ~~~~~~g~~~L~~~d~~~~~---~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
.++...+..+|+++|+++++ .+.|+++.... . ...+.+ .++.++++..+++..+|++++++++..
T Consensus 287 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-----~--l~~~~~-----~~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA-----S--LLSVSI-----VGGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp EECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC-----E--EEEEEE-----ETTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred EECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC-----e--EEEEEE-----ECCEEEEEEEECCEEEEEEEeCCCCee
Confidence 77653457899999987765 36666542110 0 012233 356789999999999999999887777
Q ss_pred eecccC-CcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCCCccCCCCCCCcEEEEeecCC
Q 006979 394 SLLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEV 470 (623)
Q Consensus 394 ~~lt~~-~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 470 (623)
+.+..+ ...+..+ +++++.+++..++...|..||++++++++.+.|+ .... .++... ..++.+.+++.
T Consensus 355 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~------~~~~-~~~~~~-~~~~~~~~~~~- 425 (695)
T 2bkl_A 355 RTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA------KVDV-PMNPEQ-YQVEQVFYASK- 425 (695)
T ss_dssp EECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE------ECCC-SSCGGG-EEEEEEEEECT-
T ss_pred EEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe------cCCC-CCCHHH-CeEEEEEEECC-
Confidence 777765 3334444 6678899999999999999999999988854443 2221 244443 36888999988
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++++++.|++ ++. +++.|+||++|||+.....+.|....+.|+++||+|+.+|+||++++|+.|.+.....+
T Consensus 426 dg~~i~~~~~~p~~--~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 501 (695)
T 2bkl_A 426 DGTKVPMFVVHRKD--LKR--DGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDK 501 (695)
T ss_dssp TSCEEEEEEEEETT--CCC--SSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred CCCEEEEEEEECCC--CCC--CCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhc
Confidence 99999999999987 222 56789999999998887777888888889999999999999999999999998877778
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHh
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVII 613 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~ 613 (623)
+...++|+.+++++|++++.+|++||+|+|+|+||+++++++ .+|++|+|+|+.+|+.|+..+
T Consensus 502 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~ 565 (695)
T 2bkl_A 502 KQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRY 565 (695)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTG
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhc
Confidence 888899999999999999999999999999999999999999 789999999999999998654
No 8
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.6e-40 Score=380.55 Aligned_cols=468 Identities=15% Similarity=0.158 Sum_probs=339.0
Q ss_pred cC-CCcEEEEeecCCCCCceEEEEcCCCC--CCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCC----cE
Q 006979 97 DG-HGRLIWLESRPTEAGRGVLVKEPAKA--GDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQ----RL 167 (623)
Q Consensus 97 ~~-~~~~~~l~~~~~e~g~~~l~~~~~~~--gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~----~l 167 (623)
+| |+.+||+..+.. +.+..||+.+... +++.+.+++.. ..+.-+......+.+++| .|+|.....| +|
T Consensus 115 ~pdG~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~lld~~--~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i 191 (741)
T 1yr2_A 115 QRRGASVFYSWNSGL-MNQSQLLVRPADAPVGTKGRVLLDPN--TWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTV 191 (741)
T ss_dssp EEETTEEEEEEECSS-CSSCEEEEEETTSCTTCCCEEEECGG--GCC----EEEEEEEECTTSSEEEEEEEETTCSEEEE
T ss_pred EEECCEEEEEEEcCC-CeEEEEEEEcCCccCCCCCEEEECHH--HhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEE
Confidence 35 999999887643 2367789887541 23555554321 101011122345667766 7888754433 49
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCC-----CCCCceeEEEEEEcCCCCcccceecccC
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-----DALNSTTEIVAIALNGQNIQEPKVLVSG 242 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~-----~~~~~~~~L~~idl~~g~~~~~~~l~~~ 242 (623)
|++|+++| +....+.. ...+..+.|||| +.|+|++.+... .......+||++++.++..+. +.+...
T Consensus 192 ~v~dl~tg--~~~~~~~~----~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~lv~~~ 263 (741)
T 1yr2_A 192 KFVGVADG--KPLADELK----WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-QPVFAT 263 (741)
T ss_dssp EEEETTTC--CEEEEEEE----EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-EEEECC
T ss_pred EEEECCCC--CCCCccCC----CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-EEEecc
Confidence 99999987 54443221 234568999999 999998865431 001123679999998775211 233332
Q ss_pred C---CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceee-eEEEcCCCCCccccCcCceeCCCCc-EEEE
Q 006979 243 S---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK-RVCVAGFDPTIVESPTEPKWSSKGE-LFFV 317 (623)
Q Consensus 243 ~---~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~ 317 (623)
. .+...+.|||||++|++...+..+ ...+||++|++++.. . .+.+.... .....+ |++||+ +++.
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~l~~~d~~~~~~--~~~~~l~~~~----~~~~~~-~~~dg~~l~~~ 333 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTD---PVNTVHVARVTNGKI--GPVTALIPDL----KAQWDF-VDGVGDQLWFV 333 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTC---SCCEEEEEEEETTEE--CCCEEEECSS----SSCEEE-EEEETTEEEEE
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCC---CcceEEEEECCCCCC--cccEEecCCC----CceEEE-EeccCCEEEEE
Confidence 2 356789999999999999865432 256899999987521 2 23333322 122333 458988 8888
Q ss_pred EeCCCCeeeEEEEecCCC--eEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceee
Q 006979 318 TDRKNGFWNLHKWIESNN--EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (623)
Q Consensus 318 ~~~~~g~~~L~~~d~~~~--~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~ 395 (623)
++......+|+++|++++ +.+.++++.... ...+.+ .++.++++..+++..+|++++++++..+.
T Consensus 334 s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~--------l~~~~~-----~~~~lv~~~~~dg~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 334 SGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN--------LESVGI-----AGNRLFASYIHDAKSQVLAFDLDGKPAGA 400 (741)
T ss_dssp ECTTCTTCEEEEEECSSSSCEEEEEECCCSSE--------EEEEEE-----EBTEEEEEEEETTEEEEEEEETTSCEEEE
T ss_pred ECCCCCCCEEEEEeCCCCccccEEEecCCCCe--------EEEEEE-----ECCEEEEEEEECCEEEEEEEeCCCCceee
Confidence 887444788999998873 567777543211 012223 45789999999999999999998777788
Q ss_pred cccC-CcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCCCccCCCCCCCcEEEEeecCCCC
Q 006979 396 LDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPG 472 (623)
Q Consensus 396 lt~~-~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~dg 472 (623)
|+.+ ...+..+ +++++.++|..++...|..||++++++++.+.|+ .. ...++...+ .++.+.+++. +|
T Consensus 401 l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~------~~-~~~~~~~~~-~~~~~~~~~~-dg 471 (741)
T 1yr2_A 401 VSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWE------PV-HLTFDPADF-RVEQVFYPSK-DG 471 (741)
T ss_dssp CBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECS------CC-CCSSCGGGE-EEEEEEEECT-TS
T ss_pred ccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe------cC-CCCCChhHC-EEEEEEEEcC-CC
Confidence 8764 3344444 6788899999999999999999999988754332 22 223444443 7789999988 99
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc
Q 006979 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 552 (623)
Q Consensus 473 ~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~ 552 (623)
..++++++.|++. +++.|+||++|||+.....+.|....+.|+++||+|+.+|+||++++|+.|.+.....++.
T Consensus 472 ~~i~~~~~~p~~~------~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~ 545 (741)
T 1yr2_A 472 TKVPMFIVRRKDA------KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQ 545 (741)
T ss_dssp CEEEEEEEEETTC------CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTH
T ss_pred CEEEEEEEecCCC------CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCC
Confidence 9999999999762 3568999999999887777788888889999999999999999999999999877777778
Q ss_pred chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHh
Q 006979 553 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVII 613 (623)
Q Consensus 553 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~ 613 (623)
..++|+.+++++|++++++|++||+|+|+|+||++++.++ .+|++|+|+|+.+|+.|+..+
T Consensus 546 ~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~ 607 (741)
T 1yr2_A 546 NVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRF 607 (741)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSG
T ss_pred CcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccc
Confidence 8899999999999999999999999999999999999999 789999999999999998654
No 9
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=6e-41 Score=373.47 Aligned_cols=445 Identities=19% Similarity=0.112 Sum_probs=326.0
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCC---CC-
Q 006979 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK---DQ- 165 (623)
Q Consensus 91 ~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~---~~- 165 (623)
+..+.++| |+.|.|...+ +|...||..+ +++.+.++.... ......++++|+++|+... +.
T Consensus 24 ~~~~~~~~DG~~la~~s~~---~g~~~lw~~~---~g~~~~lt~~~~--------~~~~~~~~spd~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFS---EGSVNAYLYD---GGETVKLNREPI--------NSVLDPHYGVGRVILVRDVSKGAEQ 89 (582)
T ss_dssp EEEEEEEETTTEEEEEEEE---TTEEEEEEEE---TTEEEECCSSCC--------SEECEECTTCSEEEEEEECSTTSCC
T ss_pred hheeecCCCCCeEEEEEcc---CCceeEEEEc---CCCcEeeecccc--------cccccccCCCCeEEEEeccCCCCcc
Confidence 45778888 8899998765 4778899863 235566654320 1123445567778886554 22
Q ss_pred -cEEEEeC--CCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccC
Q 006979 166 -RLYKHSI--DSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSG 242 (623)
Q Consensus 166 -~l~~~d~--~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~ 242 (623)
+||.+++ +++ ..+++... .. ....|+|||+.++++..... .+.++|+++++ .++++..
T Consensus 90 ~~l~~~~~~~~g~---~~~l~~~~---~~--~~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g~---~~~l~~~ 150 (582)
T 3o4h_A 90 HALFKVNTSRPGE---EQRLEAVK---PM--RILSGVDTGEAVVFTGATED--------RVALYALDGGG---LRELARL 150 (582)
T ss_dssp EEEEEEETTSTTC---CEECTTSC---SB--EEEEEEECSSCEEEEEECSS--------CEEEEEEETTE---EEEEEEE
T ss_pred eEEEEEeccCCCc---cccccCCC---Cc--eeeeeCCCCCeEEEEecCCC--------CceEEEccCCc---EEEeecC
Confidence 5888988 543 44666531 22 24589999998888766432 23355888887 6777655
Q ss_pred CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCC
Q 006979 243 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 322 (623)
Q Consensus 243 ~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~ 322 (623)
.. ..+.|||||++|++...+.. +...||++|++++. .+.+.+.. .....+.|||||+.++.++. .
T Consensus 151 ~~--~~~~~spDG~~la~~~~~~~----~~~~i~~~d~~~g~----~~~l~~~~----~~~~~~~~SpDG~~l~~~~~-~ 215 (582)
T 3o4h_A 151 PG--FGFVSDIRGDLIAGLGFFGG----GRVSLFTSNLSSGG----LRVFDSGE----GSFSSASISPGMKVTAGLET-A 215 (582)
T ss_dssp SS--CEEEEEEETTEEEEEEEEET----TEEEEEEEETTTCC----CEEECCSS----CEEEEEEECTTSCEEEEEEC-S
T ss_pred CC--ceEEECCCCCEEEEEEEcCC----CCeEEEEEcCCCCC----ceEeecCC----CccccceECCCCCEEEEccC-C
Confidence 44 67899999999999886643 24669999998773 33445444 45578999999994446665 6
Q ss_pred CeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcc
Q 006979 323 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTD 402 (623)
Q Consensus 323 g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~ 402 (623)
+..+|+++|+++++.+.+......+..+. ........++||| .++++...++..+||.+ |+... .....
T Consensus 216 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~----g~~~~--~~~~~ 284 (582)
T 3o4h_A 216 REARLVTVDPRDGSVEDLELPSKDFSSYR----PTAITWLGYLPDG-RLAVVARREGRSAVFID----GERVE--APQGN 284 (582)
T ss_dssp SCEEEEEECTTTCCEEECCCSCSHHHHHC----CSEEEEEEECTTS-CEEEEEEETTEEEEEET----TEEEC--CCSSE
T ss_pred CeeEEEEEcCCCCcEEEccCCCcChhhhh----hccccceeEcCCC-cEEEEEEcCCcEEEEEE----CCeec--cCCCc
Confidence 77899999999988773333333333344 0000100112377 88899989999888876 44433 22234
Q ss_pred eEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCCCccCC---CCCCCcEEEEeecCCCCeEEEEEE
Q 006979 403 IDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYK---SYFSLPELIEFPTEVPGQKAYAYY 479 (623)
Q Consensus 403 v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~dg~~i~~~l 479 (623)
+..++..++++++..++...|+++|.+++++ +.++| .+++ ..+...+.+.++.. +|..+++++
T Consensus 285 v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~-~~~~l------------~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~~ 350 (582)
T 3o4h_A 285 HGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE-PLLEG------------GLPEDLRRSIAGSRLVWVESF-DGSRVPTYV 350 (582)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEETTCC-EEECC------------CCCHHHHHTEEEEEEEEEECT-TSCEEEEEE
T ss_pred eEEEEecCCEEEEEEcCCCCCCeEEEEcCCC-ceEEE------------ecCCccccccCcceEEEEECC-CCCEEEEEE
Confidence 5555222677888888889999999998765 43332 1222 44667889999997 899999999
Q ss_pred EcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHH
Q 006979 480 YPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCC 559 (623)
Q Consensus 480 ~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~ 559 (623)
+.|++. .++.|+||++||++.......|...++.|+++||+|+.+|+||++++|+++.+.....++...++|+.
T Consensus 351 ~~p~~~------~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~ 424 (582)
T 3o4h_A 351 LESGRA------PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVS 424 (582)
T ss_dssp EEETTS------CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHH
T ss_pred EcCCCC------CCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHH
Confidence 999862 33789999999998776677888999999999999999999999999999999888889989999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhhhh
Q 006979 560 SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIISEE 616 (623)
Q Consensus 560 ~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~~~ 616 (623)
++++++.+++.+| ||+|+|+|+||++++.++ .+|++|+++|+.+|+.|+..+...
T Consensus 425 ~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~ 480 (582)
T 3o4h_A 425 AAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYEL 480 (582)
T ss_dssp HHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHT
T ss_pred HHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhc
Confidence 9999999998887 999999999999999999 779999999999999999876543
No 10
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=4e-39 Score=366.92 Aligned_cols=468 Identities=15% Similarity=0.128 Sum_probs=334.7
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCCc
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQR 166 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~~ 166 (623)
..+..+.|||++.+.+.. ++. ++.++..++ +.+.++... .......+++| .|+|+ .++.
T Consensus 82 ~~v~~~~~spd~~~~~~~-----~~~--i~~~d~~~~-~~~~l~~~~---------~~~~~~~~SpdG~~la~~--~~~~ 142 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFT-----QGG--LVGFDMLAR-KVTYLFDTN---------EETASLDFSPVGDRVAYV--RNHN 142 (706)
T ss_dssp CCCEEEEETTTTEEEEEE-----TTE--EEEEETTTT-EEEEEECCT---------TCCTTCEECTTSSEEEEE--ETTE
T ss_pred cCceeEEECCCCeEEEEE-----CCE--EEEEECCCC-ceEEccCCc---------ccccCCcCCCCCCEEEEE--ECCe
Confidence 346788899864455443 133 455554422 333333221 01233455555 78886 4577
Q ss_pred EEEEeCCC-----CCCCceecCCCCCCC-----------CeeecceeeCCCCCEEEEEEeccCCC---------------
Q 006979 167 LYKHSIDS-----KDSSPLPITPDYGEP-----------LVSYADGIFDPRFNRYVTVREDRRQD--------------- 215 (623)
Q Consensus 167 l~~~d~~~-----g~~~~~~Lt~~~~~~-----------~~~~~d~~~sPdG~~l~~v~~~~~~~--------------- 215 (623)
||++++++ + ..++++...... ..+...+.|||||++|++.+.+....
T Consensus 143 i~v~~~~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 143 LYIARGGKLGEGMS--RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp EEEEECBCTTSCCC--CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred EEEEecCcccccCC--CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 99999988 7 677776641110 00136788999999999987432110
Q ss_pred ---------CCCceeEEEEEEcCCCCcccceecccC---CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC
Q 006979 216 ---------ALNSTTEIVAIALNGQNIQEPKVLVSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN 283 (623)
Q Consensus 216 ---------~~~~~~~L~~idl~~g~~~~~~~l~~~---~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~ 283 (623)
.......|+++|+++++ .+.+..+ ......+.|||||++|++...++.. ....|+++|++++
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g 294 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGK---TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETG 294 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTE---EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTC
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCc---eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCC
Confidence 01234789999999987 5555432 2335578999999999998766542 3567999998876
Q ss_pred CceeeeEEEcCCCCCccccCcCceeCC--CCcEEEEEeCCCCeeeEEEEecCCCeEEEEeeccccccc-ccccccCccee
Q 006979 284 GDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSR-PLWVFGINSYE 360 (623)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~ws~--DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~-~~w~~~~~~~~ 360 (623)
.. ...+.......|...+..+.|+| ||++++.++. .+..+||.++.+++..+.|+.....+.. +.|+
T Consensus 295 ~~--~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~s------- 364 (706)
T 2z3z_A 295 RF--VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFD------- 364 (706)
T ss_dssp CE--EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCCSSSCEEEEEEEC-------
T ss_pred ce--eeEEEEccCCCeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCCCCeEEEeeeEEc-------
Confidence 22 22222222212222346789999 9997777776 6888999999877777777655433332 3343
Q ss_pred EEeecCCCCEEEEEEEECC--eEEEEEEeCCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 361 IIQSHGEKNLIACSYRQNG--RSYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 361 ~l~~s~~~~~l~~~~~~~g--~~~L~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
|+++.|+++...++ ..+||++|.++++.++|+.... +..+ +++++.+++..++...|..+|++++++++.
T Consensus 365 -----pdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 365 -----PKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp -----TTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred -----CCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 38889999887665 5799999999988888875433 3333 888999999988888999999999988762
Q ss_pred eeeeeEEEeccCCCCccCCCCCCCcEEEEeecCCCC-eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc-CcCC
Q 006979 437 KAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILN 514 (623)
Q Consensus 437 ~~lt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~dg-~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~-~~~~ 514 (623)
+. +.... .+....++.++.+.++.. +| ..++++++.|++ +++ ++++|+||++|||+..... ..|.
T Consensus 439 ~~------~~~~~--~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~P~~--~~~--~~~~p~iv~~HGg~~~~~~~~~~~ 505 (706)
T 2z3z_A 439 TL------LEAKN--PDTGYAMPEIRTGTIMAA-DGQTPLYYKLTMPLH--FDP--AKKYPVIVYVYGGPHAQLVTKTWR 505 (706)
T ss_dssp EE------EECC--------CCCCEEEEEEECT-TSSSEEEEEEECCTT--CCT--TSCEEEEEECCCCTTCCCCCSCC-
T ss_pred ee------ccccc--hhhhcCCCCcEEEEEEcC-CCCEEEEEEEEeCCC--CCC--CCCccEEEEecCCCCceeeccccc
Confidence 22 22221 234455678889999987 88 899999999987 332 5678999999999876543 2344
Q ss_pred H----HhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHH
Q 006979 515 L----SIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLA 590 (623)
Q Consensus 515 ~----~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~ 590 (623)
. .++.|+++||.|+++|+||.++++..+.......++..+++|+.+++++|.+++.+|++||+|+|+|+||++++.
T Consensus 506 ~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~ 585 (706)
T 2z3z_A 506 SSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTN 585 (706)
T ss_dssp ---CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred cCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHH
Confidence 3 688999999999999999999999999888888899889999999999999999999999999999999999999
Q ss_pred Hh-cCCCceeEEEecccCCCHHH
Q 006979 591 AL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 591 ~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
++ .+|++|+++|+.+|+.|+..
T Consensus 586 ~a~~~p~~~~~~v~~~~~~~~~~ 608 (706)
T 2z3z_A 586 LMLTHGDVFKVGVAGGPVIDWNR 608 (706)
T ss_dssp HHHHSTTTEEEEEEESCCCCGGG
T ss_pred HHHhCCCcEEEEEEcCCccchHH
Confidence 98 88999999999999998753
No 11
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=1.2e-38 Score=363.69 Aligned_cols=476 Identities=15% Similarity=0.137 Sum_probs=325.0
Q ss_pred cCceEEcC-CCcEEEEeecCCCC---CceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCC
Q 006979 91 LGGTAVDG-HGRLIWLESRPTEA---GRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKD 164 (623)
Q Consensus 91 ~~~~~~~~-~~~~~~l~~~~~e~---g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~ 164 (623)
+..+.||| |+.|.+........ ....|+.++..++ +.+.+.... . +........+++| .|+|...
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~l~~~~-~-----~~~~~~~~~~SPdG~~la~~~~-- 133 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG-DPQSLDPPE-V-----SNAKLQYAGWGPKGQQLIFIFE-- 133 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC-CCEECCCTT-C-----CSCCCSBCCBCSSTTCEEEEET--
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC-ceEeccCCc-c-----ccccccccEECCCCCEEEEEEC--
Confidence 67899999 77787775332111 1134555555533 444443221 0 0001223344444 7888864
Q ss_pred CcEEEEeCCCCCCCceecCCCCCCCC---------------eeecceeeCCCCCEEEEEEeccCCC--------------
Q 006979 165 QRLYKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD-------------- 215 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~~Lt~~~~~~~---------------~~~~d~~~sPdG~~l~~v~~~~~~~-------------- 215 (623)
++||++++.++ ..++++......- .++..+.|||||++|++...+....
T Consensus 134 ~~i~~~~~~~g--~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~ 211 (723)
T 1xfd_A 134 NNIYYCAHVGK--QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYP 211 (723)
T ss_dssp TEEEEESSSSS--CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSC
T ss_pred CeEEEEECCCC--ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCC
Confidence 57999999987 6777765411100 0224688999999999988653210
Q ss_pred -----------CCCceeEEEEEEcCCCCcccceecccC------CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEE
Q 006979 216 -----------ALNSTTEIVAIALNGQNIQEPKVLVSG------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVG 278 (623)
Q Consensus 216 -----------~~~~~~~L~~idl~~g~~~~~~~l~~~------~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~ 278 (623)
.......|+++|+++++. .+.+... ......+.|||||+.|++...+.. ....|+++
T Consensus 212 ~~~~~~~~~~G~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~ 285 (723)
T 1xfd_A 212 TVKPYHYPKAGSENPSISLHVIGLNGPTH--DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ----NVSILTLC 285 (723)
T ss_dssp CCEEEECCBTTSCCCEEEEEEEESSSSCC--CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS----CEEEEEEE
T ss_pred cceeccCCCCCCCCCeeEEEEEECCCCce--eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC----CeEEEEEE
Confidence 011245899999998862 2555543 223456899999998876653322 35789999
Q ss_pred EecCCCceeeeEEEcCCCCCcccc-CcCceeCCCCc-EEEE-EeCCCC----eeeEEEEe-cCCCe---EEEEeeccccc
Q 006979 279 YISENGDVYKRVCVAGFDPTIVES-PTEPKWSSKGE-LFFV-TDRKNG----FWNLHKWI-ESNNE---VLAIYSLDAEF 347 (623)
Q Consensus 279 d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ws~DG~-l~~~-~~~~~g----~~~L~~~d-~~~~~---~~~l~~~~~~~ 347 (623)
|++++. ...++......|... ...+.|+|||+ |++. ++. .+ ..+||.+| ..+++ .+.|+.+..++
T Consensus 286 d~~~g~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 361 (723)
T 1xfd_A 286 DATTGV---CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIP-QGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV 361 (723)
T ss_dssp ETTTCC---EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEEC-CSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE
T ss_pred eCCCCc---ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecc-cCCCcceeEEEEEeccCCCCccceeEeecCCeEE
Confidence 998763 233332211111111 14789999999 8887 554 55 67899999 56666 56665433322
Q ss_pred cc-ccccccCcceeEEeecCCCCEEEEEEEEC--CeEEEEEEeCCCC-ceeecccC---CcceE--eeeecCCEEEEEEe
Q 006979 348 SR-PLWVFGINSYEIIQSHGEKNLIACSYRQN--GRSYLGILDDFGH-SLSLLDIP---FTDID--NITLGNDCLFVEGA 418 (623)
Q Consensus 348 ~~-~~w~~~~~~~~~l~~s~~~~~l~~~~~~~--g~~~L~~~d~~~~-~~~~lt~~---~~~v~--~~~~~~~~~~~~~~ 418 (623)
.. +.|+ ||++.|++.+.++ +..+||.++.+++ +.++|+.. ...+. .++++++.+++..+
T Consensus 362 ~~~~~~s------------pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 362 TKILAYD------------EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp EEEEEEE------------TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EeeeEEc------------CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 21 2333 4999999988776 7889999998775 45667642 22333 33889999999988
Q ss_pred cCCCCCeEEEEEcCCCcceeeeeEEEeccCCC--CccCCCCCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCC
Q 006979 419 SGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPD--TLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPP 496 (623)
Q Consensus 419 s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~P 496 (623)
++..|..++. +...++. ..++..+.. ..+.+..+..++.+.+++. +| .++++++.|++ +++ ++++|
T Consensus 430 ~~~~p~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-~l~~~~~~P~~--~~~--~~~~p 497 (723)
T 1xfd_A 430 GPGVPMVTVH-NTTDKKK-----MFDLETNEHVKKAINDRQMPKVEYRDIEID-DY-NLPMQILKPAT--FTD--TTHYP 497 (723)
T ss_dssp SSSSCCEEEE-ETTTCCE-----EEEEECCHHHHHHHHTSCCCBCCBCCEEET-TE-EECCBEEBCSS--CCS--SSCEE
T ss_pred CCCCCeEEEE-ECCCCCE-----EEEeccChhhhhhhhhccCCCceEEEEEcC-Cc-eEEEEEEeCCC--CCC--CCccC
Confidence 8888876554 6544432 122332211 1233455678888999987 78 99999999987 332 67789
Q ss_pred EEEEecCCCCCcc-cCcC--CHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 497 LLVKSHGGPTSEA-RGIL--NLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 497 liv~~hGg~~~~~-~~~~--~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
+||++||++.... ...| ....+.++++||+|+.+|+||++++|+.+.......++...++|+.+++++|.+++.+|+
T Consensus 498 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~ 577 (723)
T 1xfd_A 498 LLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDR 577 (723)
T ss_dssp EEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEE
T ss_pred EEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcCh
Confidence 9999999987643 2233 366778888999999999999999999998877888888899999999999999988999
Q ss_pred CceEEEEcChHHHHHHHHh-cC----CCceeEEEecccCCCHH
Q 006979 574 KRLCITGGSAGGYTTLAAL-AF----RDTFKAGASLYGVSIPV 611 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~----~~~f~a~v~~~g~~d~~ 611 (623)
+||+|+|+||||++++.++ .+ |++|+++|+.+|+.|+.
T Consensus 578 ~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~ 620 (723)
T 1xfd_A 578 TRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFK 620 (723)
T ss_dssp EEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTT
T ss_pred hhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchH
Confidence 9999999999999999999 77 89999999999999875
No 12
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=361.94 Aligned_cols=472 Identities=14% Similarity=0.106 Sum_probs=324.2
Q ss_pred cCceEEcC-CCcEEEEeecCCC---CCceEEEEcCCCCCCCC---cccCCCCCccceeeeecCCceEEEeCC--EEEEEe
Q 006979 91 LGGTAVDG-HGRLIWLESRPTE---AGRGVLVKEPAKAGDEP---SDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSN 161 (623)
Q Consensus 91 ~~~~~~~~-~~~~~~l~~~~~e---~g~~~l~~~~~~~gg~~---~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~ 161 (623)
+..+.||| |+.|.+...+... .+...|+.++..+| +. +.+ +. +.....+++| .|+|..
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g-~~~~~~~l-~~-----------~~~~~~~SPDG~~la~~~ 128 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG-EFVRGNEL-PR-----------PIQYLCWSPVGSKLAYVY 128 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-EECCSSCC-CS-----------SBCCEEECSSTTCEEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC-ccccceec-Cc-----------ccccceECCCCCEEEEEE
Confidence 56899999 8888887643210 01234666665532 32 222 11 1334556655 788884
Q ss_pred CCCCcEEEEeCCCCCCCceecCCCCCCCC---------------eeecceeeCCCCCEEEEEEeccCCC-----------
Q 006979 162 YKDQRLYKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD----------- 215 (623)
Q Consensus 162 ~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~---------------~~~~d~~~sPdG~~l~~v~~~~~~~----------- 215 (623)
++.||++++.++ ..++++....... .+...+.|||||++|++.+.+....
T Consensus 129 --~~~i~~~~~~~g--~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~ 204 (719)
T 1z68_A 129 --QNNIYLKQRPGD--PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDE 204 (719)
T ss_dssp --TTEEEEESSTTS--CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSS
T ss_pred --CCeEEEEeCCCC--CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCC
Confidence 567999999887 6777775311100 1124789999999999988653210
Q ss_pred --------------CCCceeEEEEEEcCCCCcccceecc------cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEE
Q 006979 216 --------------ALNSTTEIVAIALNGQNIQEPKVLV------SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAEL 275 (623)
Q Consensus 216 --------------~~~~~~~L~~idl~~g~~~~~~~l~------~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L 275 (623)
.......|+++|+++++......+. ........++|||||+ +++...++.. ...+|
T Consensus 205 ~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~---~~~~l 280 (719)
T 1z68_A 205 QYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQ---NVSVL 280 (719)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESST---TEEEE
T ss_pred CCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEecccc---CeEEE
Confidence 0123458999999987610001332 2333456789999975 6666434332 35689
Q ss_pred EEEE----ecCCCceeeeEEE----cCCCCCccc--cCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecc
Q 006979 276 WVGY----ISENGDVYKRVCV----AGFDPTIVE--SPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLD 344 (623)
Q Consensus 276 ~v~d----~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~ 344 (623)
+++| ++++. ...++ .+.+ .|.. ....+.|+|||+ +++......|..+|+.+|+++++.+.|+...
T Consensus 281 ~~~d~~~~~~~g~---~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~ 356 (719)
T 1z68_A 281 SICDFREDWQTWD---CPKTQEHIEESRT-GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGK 356 (719)
T ss_dssp EEEEECSSSSSEE---CCGGGEEEEECSS-SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSS
T ss_pred EEEcccCCCCCCc---eEEEEecccccCC-ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCc
Confidence 9999 65542 12222 2222 2111 112789999999 7775443378899999999888877777543
Q ss_pred cccccccccccCcceeEEeecCCCCEEEEEEEE----CCeEEEEEEeCCCC--ceeecccC----CcceEe--eeecCCE
Q 006979 345 AEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ----NGRSYLGILDDFGH--SLSLLDIP----FTDIDN--ITLGNDC 412 (623)
Q Consensus 345 ~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~----~g~~~L~~~d~~~~--~~~~lt~~----~~~v~~--~~~~~~~ 412 (623)
.++..+. +. +++.+++++.. .+..+||.++.+++ +.++|+.. ...+.. ++++++.
T Consensus 357 ~~v~~~~---------~~----d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~ 423 (719)
T 1z68_A 357 WEAINIF---------RV----TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKY 423 (719)
T ss_dssp SCEEEEE---------EE----CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSS
T ss_pred eEEEEEE---------EE----eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCE
Confidence 3332211 11 67889998876 67889999998766 45677642 122332 3778888
Q ss_pred EEEEEecCCCCCeEEEEEcCCCcceeeeeEEEeccCCC--CccCCCCCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCC
Q 006979 413 LFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPD--TLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQAS 490 (623)
Q Consensus 413 ~~~~~~s~~~~~~ly~~~l~~~~~~~lt~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~ 490 (623)
+++..+++..| .++++++++++..+ ++..+.. ..+....++.++.++++.. + .+++++++.|++ +++
T Consensus 424 l~~~~s~~~~p-~~~l~d~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~P~~--~~~- 492 (719)
T 1z68_A 424 YALVCYGPGIP-ISTLHDGRTDQEIK-----ILEENKELENALKNIQLPKEEIKKLEVD-E-ITLWYKMILPPQ--FDR- 492 (719)
T ss_dssp EEEEECCBSSC-EEEEECSSSCCEEE-----EEECCHHHHHHTTSBCCCEEEEEEEEET-T-EEEEEEEEECTT--CCS-
T ss_pred EEEEcCCCCCC-eEEEEECCCCCEEE-----EeecchhhhhhhccccCCceEEEEEecC-C-eEEEEEEEeCCC--CCC-
Confidence 88888777666 68888888776433 2333321 1244556778899999986 6 899999999987 332
Q ss_pred CCCCCCEEEEecCCCCCcc-cCcCC-HHhHHH-HcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHh
Q 006979 491 PEEKPPLLVKSHGGPTSEA-RGILN-LSIQYW-TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVG 567 (623)
Q Consensus 491 ~~~~~Pliv~~hGg~~~~~-~~~~~-~~~~~~-a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~ 567 (623)
++++|+||++||++.... ...+. .....+ +++||+|+.+|+||+++++..+.......++...++|+.+++++|.+
T Consensus 493 -~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 571 (719)
T 1z68_A 493 -SKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIE 571 (719)
T ss_dssp -SSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHT
T ss_pred -CCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHh
Confidence 567899999999986643 22333 234444 58999999999999999999998888888988899999999999999
Q ss_pred CCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHH
Q 006979 568 SGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 568 ~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
++.+|++||+|+|+|+||++++.++ .+|++|+++|+.+|+.|+..
T Consensus 572 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 617 (719)
T 1z68_A 572 MGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEY 617 (719)
T ss_dssp TSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTT
T ss_pred cCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHH
Confidence 9889999999999999999999999 77999999999999998753
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=7.6e-33 Score=309.80 Aligned_cols=486 Identities=12% Similarity=0.040 Sum_probs=317.8
Q ss_pred HHhccCCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCC----C-CCCCcccCC-CCCccc-eeeeecCCce-EEEeC
Q 006979 83 VVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAK----A-GDEPSDITP-KEYAVR-TTAQEYGGGA-FRIFG 154 (623)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~----~-gg~~~~l~p-~~~~~r-~~~~~~g~~~-~~~s~ 154 (623)
.+.....++..+..- |+.+|+....+. ..+ .|||.... + ..+...+++ +..+.. ..-..+.+.+ +.+.+
T Consensus 65 ~~~~~~~ri~~p~~~-g~~~y~f~~d~~-~~~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~~ 141 (711)
T 4hvt_A 65 TIFYDQRKTPYGVIR-KGYVYNFWMDDK-NPQ-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQNP 141 (711)
T ss_dssp HHHTCTTSCCCCEEE-TTEEEEEECCSS-CSS-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSST
T ss_pred HHhccccccCCcEEE-CCEEEEEEecCC-CCc-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeecCCCC
Confidence 344444466666555 888888876554 345 68875211 0 123444442 222211 1101111211 22233
Q ss_pred CEEEEEeCCCC----cEEEEeCCCCCCCceecCCCCC--CC-----CeeecceeeCCCCCEEEEEEeccCC--CCCCcee
Q 006979 155 DTVIFSNYKDQ----RLYKHSIDSKDSSPLPITPDYG--EP-----LVSYADGIFDPRFNRYVTVREDRRQ--DALNSTT 221 (623)
Q Consensus 155 d~l~f~~~~~~----~l~~~d~~~g~~~~~~Lt~~~~--~~-----~~~~~d~~~sPdG~~l~~v~~~~~~--~~~~~~~ 221 (623)
+.+++.-...| .+..+|+.++ +.+..+.. .. ..++..++|- |++.+++.+...+. .......
T Consensus 142 ~~~~~~ls~~G~d~~~~~~~d~~t~----~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 142 NRYLISMSFGGKDEMFFREWDLEKK----DFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp TEEEEEEEETTCSEEEEEEEETTTT----EECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSBC
T ss_pred CEEEEEeCCCCCceeEEEEEECCcC----CcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCCC
Confidence 45555432222 3888999865 23333211 00 1244555887 45556554432221 1223457
Q ss_pred EEEEEEcCCCCcccceecccC--CCcccceeeCCCCCE---EEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCC
Q 006979 222 EIVAIALNGQNIQEPKVLVSG--SDFYAFPRMDPRGER---MAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD 296 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~~--~~~~~~p~wSPDG~~---la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~ 296 (623)
.+|+..+.+...+. +.+..+ .++...+..++|+++ ..++..... +..+++|+.+.+.... ...++....+
T Consensus 217 ~v~~~~~Gt~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~-~~~~l~~~~~ 291 (711)
T 4hvt_A 217 SLYIWKRGESIEKA-KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKD---FYNYDNYILDTKYKNL-KLQKINMPSD 291 (711)
T ss_dssp EEEEEETTSCGGGC-EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESS---SSCEEEEEEECSSSSC-EEEECCSCTT
T ss_pred EEEEEECCCChHHC-eEEeccCCCceEEEEEEecCCCceEEEEEEEEecc---cCceeEEEEcCCCCCC-cceEeecCCc
Confidence 89999887754322 334332 345566778899985 234442211 2468899998764321 1223322222
Q ss_pred CCccccCcCceeCCCCcEEEEEeCC--C-----CeeeEEEEecCCC--------eEEEEeecccccccccccccCcceeE
Q 006979 297 PTIVESPTEPKWSSKGELFFVTDRK--N-----GFWNLHKWIESNN--------EVLAIYSLDAEFSRPLWVFGINSYEI 361 (623)
Q Consensus 297 ~~~~~~~~~~~ws~DG~l~~~~~~~--~-----g~~~L~~~d~~~~--------~~~~l~~~~~~~~~~~w~~~~~~~~~ 361 (623)
..+.+..+|++++..... . ....|+.+|++++ +.+.+...+.+ .....+.+
T Consensus 292 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~l~~~~~ 357 (711)
T 4hvt_A 292 -------ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTAN-------EVFNFIST 357 (711)
T ss_dssp -------CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTT-------EEEEEEEE
T ss_pred -------ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCC-------CeEEEEEE
Confidence 234566788776654320 0 2346888887653 34443322111 11123333
Q ss_pred EeecCCCCEEEEEEEECCeEEEEEEeCCCCc--eee-cccCC-cceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 362 IQSHGEKNLIACSYRQNGRSYLGILDDFGHS--LSL-LDIPF-TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 362 l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~--~~~-lt~~~-~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.++.++++..+++..+|+++++.+++ .+. +..+. +.+..+ +.+++.+++..++...|+.+|++++. ++
T Consensus 358 -----~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 358 -----TKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp -----CSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SC
T ss_pred -----ECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-Cc
Confidence 34578999999999999999987774 445 55543 344433 56778899999999999999999987 66
Q ss_pred ceeeeeEEEeccCCCCccCCCCCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH
Q 006979 436 LKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL 515 (623)
Q Consensus 436 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~ 515 (623)
.+.|+ ..+ ..+++..+ .++.+.+++. ||.+|+++++.|++. ++ ++++|+||++|||++....+.+..
T Consensus 432 ~~~l~------~~~-~~~~~~~~-~~e~v~~~s~-DG~~i~~~l~~P~~~--~~--~~~~P~vl~~HGG~~~~~~~~~~~ 498 (711)
T 4hvt_A 432 LKIIR------KAL-YSFDSENY-VLEQKEATSF-DGVKIPYFLVYKKGI--KF--DGKNPTLLEAYGGFQVINAPYFSR 498 (711)
T ss_dssp EEEEE------CCS-SCCCGGGE-EEEEEEEECT-TSCEEEEEEEEETTC--CC--SSCCCEEEECCCCTTCCCCCCCCH
T ss_pred EEEEe------cCC-cccCcccC-eeEEEEEECC-CCeEEEEEEEecCCC--CC--CCCccEEEEECCCCCCCCCCcccH
Confidence 44333 222 24555555 7899999998 999999999999873 22 678999999999998888888876
Q ss_pred Hh-HHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-c
Q 006979 516 SI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-A 593 (623)
Q Consensus 516 ~~-~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~ 593 (623)
.. +.|+++||+|+.+|+||++++|+.|.+.....++...++|+.++++||++++.+|++||+|+|+|+||+++++++ .
T Consensus 499 ~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~ 578 (711)
T 4hvt_A 499 IKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQ 578 (711)
T ss_dssp HHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHh
Confidence 65 599999999999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred CCCceeEEEecccCCCHHHhh
Q 006979 594 FRDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 594 ~~~~f~a~v~~~g~~d~~~~~ 614 (623)
+|++|+|+|+.+|++|+..+.
T Consensus 579 ~pd~f~a~V~~~pv~D~~~~~ 599 (711)
T 4hvt_A 579 RPELFGAVACEVPILDMIRYK 599 (711)
T ss_dssp CGGGCSEEEEESCCCCTTTGG
T ss_pred CcCceEEEEEeCCccchhhhh
Confidence 899999999999999987654
No 14
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=2.9e-21 Score=220.77 Aligned_cols=316 Identities=11% Similarity=0.060 Sum_probs=209.2
Q ss_pred cCCHHHHhccC--CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCC--ceEEEe
Q 006979 78 PLTADVVSGAS--KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG--GAFRIF 153 (623)
Q Consensus 78 ~~t~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~--~~~~~s 153 (623)
++|+|.+.... .....+.|+|++.++... +|...+| +..+| +.+.++... ... .+.+ ..+.++
T Consensus 4 ~~tl~~~~~~~~~~~~~~~~w~~dg~~~~~~-----~~~i~~~--~~~~~-~~~~~~~~~-~~~----~~~~~~~~~~~S 70 (740)
T 4a5s_A 4 TYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ-----ENNILVF--NAEYG-NSSVFLENS-TFD----EFGHSINDYSIS 70 (740)
T ss_dssp ECCHHHHHHTCSCCCCCCEEECSSSEEEEEE-----TTEEEEE--ETTTC-CEEEEECTT-TTT----TCCSCCCEEEEC
T ss_pred ceeHHHHhcCcccccccccEECCCCcEEEEc-----CCcEEEE--ECCCC-ceEEEEech-hhh----hhcccccceEEC
Confidence 57889988753 334689999844444443 2554444 44433 444444322 100 1112 236777
Q ss_pred CC--EEEEEeCC--------CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 006979 154 GD--TVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 154 ~d--~l~f~~~~--------~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L 223 (623)
+| .|+|.... .+.+|++|+.++ ..++|+.. ......+.|||||++|+|+.+ ++|
T Consensus 71 pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~~~~l~~~----~~~~~~~~~SPdG~~la~~~~----------~~i 134 (740)
T 4a5s_A 71 PDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--QLITEERI----PNNTQWVTWSPVGHKLAYVWN----------NDI 134 (740)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCC----CTTEEEEEECSSTTCEEEEET----------TEE
T ss_pred CCCCEEEEEECCeeeEEEccceEEEEEECCCC--cEEEcccC----CCcceeeEECCCCCEEEEEEC----------CeE
Confidence 77 67776532 156899999988 67777764 234567899999999999864 569
Q ss_pred EEEEcCCCCcccceecccCCC-------------------cccceeeCCCCCEEEEEEecCCCCC---------------
Q 006979 224 VAIALNGQNIQEPKVLVSGSD-------------------FYAFPRMDPRGERMAWIEWHHPNMP--------------- 269 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~-------------------~~~~p~wSPDG~~la~~~~~~~~~p--------------- 269 (623)
|++|+.+++ .++|+.+.. ....+.|||||++|||.+.+...++
T Consensus 135 ~~~~~~~~~---~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~ 211 (740)
T 4a5s_A 135 YVKIEPNLP---SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYP 211 (740)
T ss_dssp EEESSTTSC---CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSC
T ss_pred EEEECCCCc---eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCC
Confidence 999999988 777765332 1124789999999999986655221
Q ss_pred -------------CCceEEEEEEecC---CCceeeeEEEc-----CCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeE
Q 006979 270 -------------WDKAELWVGYISE---NGDVYKRVCVA-----GFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNL 327 (623)
Q Consensus 270 -------------~~~~~L~v~d~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L 327 (623)
....+|+++|+++ +..+...++.. +.+ .++..+.|+|||+ +++..++..+...|
T Consensus 212 ~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~wspdg~~~~~~~~r~~~~~~i 287 (740)
T 4a5s_A 212 KTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD----HYLCDVTWATQERISLQWLRRIQNYSVM 287 (740)
T ss_dssp EEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSC----EEEEEEEEEETTEEEEEEEESSTTEEEE
T ss_pred cceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCC----eEEEEEEEeCCCeEEEEEeCCCCCEEEE
Confidence 1234789999987 53111223322 123 5678899999999 66666664566789
Q ss_pred EEEecCCCe-------EEEEeeccccccccccccc--CcceeEEeecCCCCEEE-EEEEECCeEEEEEEeCCCCceeecc
Q 006979 328 HKWIESNNE-------VLAIYSLDAEFSRPLWVFG--INSYEIIQSHGEKNLIA-CSYRQNGRSYLGILDDFGHSLSLLD 397 (623)
Q Consensus 328 ~~~d~~~~~-------~~~l~~~~~~~~~~~w~~~--~~~~~~l~~s~~~~~l~-~~~~~~g~~~L~~~d~~~~~~~~lt 397 (623)
+.+|+++++ .+.+..+ ....|... .....|. |||+.++ +.++++|..+||++|.++++.++|+
T Consensus 288 ~~~d~~tg~~~~~~~~~~~l~~~----~~~~~v~~~~~~~p~fs---pDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 288 DICDYDESSGRWNCLVARQHIEM----STTGWVGRFRPSEPHFT---LDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp EEEEEETTTTEEEECGGGCEEEE----CSSSCSSSSSCCCCEEC---TTSSEEEEEEECTTSCEEEEEEETTCSSCEESC
T ss_pred EEEECCCCccccceeEEEEeeec----cCCceEccCcCCCceEc---CCCCEEEEEEEcCCCceEEEEEECCCCceEecc
Confidence 999998876 2233222 11223211 1122333 3888887 7888899999999999999999999
Q ss_pred cCCcceEee-eecCCEEEEEEec---CCCCCeEEEEEcCCCcc
Q 006979 398 IPFTDIDNI-TLGNDCLFVEGAS---GVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 398 ~~~~~v~~~-~~~~~~~~~~~~s---~~~~~~ly~~~l~~~~~ 436 (623)
.+.+.+..+ ..+++.+||++.. .....+||++++++++.
T Consensus 361 ~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 361 KGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp CSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred cCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 988776655 5678899998864 24557899999988754
No 15
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=2.5e-19 Score=187.71 Aligned_cols=309 Identities=11% Similarity=0.075 Sum_probs=196.7
Q ss_pred CceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCCcEE
Q 006979 92 GGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQRLY 168 (623)
Q Consensus 92 ~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~~l~ 168 (623)
.++.||| |+.|++...+ +|...||.++..++ +.+.++.... .......+++| .|+|... +..||
T Consensus 39 ~~~~~SpDg~~l~~~~~~---~g~~~l~~~d~~~g-~~~~lt~~~~--------~~~~~~~~spdg~~l~~~~~-~~~l~ 105 (388)
T 3pe7_A 39 YQKCFTRDGSKLLFGGAF---DGPWNYYLLDLNTQ-VATQLTEGRG--------DNTFGGFLSPDDDALFYVKD-GRNLM 105 (388)
T ss_dssp TSCCBCTTSCEEEEEECT---TSSCEEEEEETTTC-EEEECCCSSC--------BCSSSCEECTTSSEEEEEET-TTEEE
T ss_pred cCccCCCCCCEEEEEEcC---CCCceEEEEeCCCC-ceEEeeeCCC--------CCccceEEcCCCCEEEEEeC-CCeEE
Confidence 3488999 8889988753 46667888877643 5566664331 01112345544 7888764 45799
Q ss_pred EEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCC-------------CCCceeEEEEEEcCCCCccc
Q 006979 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-------------ALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 169 ~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~-------------~~~~~~~L~~idl~~g~~~~ 235 (623)
++|+.++ +.+.+..... .........++|||+.++++..+.... .......|+++|+++++
T Consensus 106 ~~d~~~g--~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--- 179 (388)
T 3pe7_A 106 RVDLATL--EENVVYQVPA-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--- 179 (388)
T ss_dssp EEETTTC--CEEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC---
T ss_pred EEECCCC--cceeeeechh-hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc---
Confidence 9999987 5665554310 011122334599999998776433210 01134789999999998
Q ss_pred ceecccCCCcccceeeCC-CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-
Q 006979 236 PKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE- 313 (623)
Q Consensus 236 ~~~l~~~~~~~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~- 313 (623)
.+.++........+.||| ||++|+|+...... ....+||+++++++ ..+.+...... ..+..+.|+|||+
T Consensus 180 ~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~~----~~~~l~~~~~~--~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 180 STVILQENQWLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDGT----NMRKVKTHAEG--ESCTHEFWVPDGSA 251 (388)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTSC----CCEESCCCCTT--EEEEEEEECTTSSC
T ss_pred eEEeecCCccccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCCC----ceEEeeeCCCC--cccccceECCCCCE
Confidence 777877666678899999 99999999843110 01456999998766 23333332211 2355789999999
Q ss_pred EEEEEeCCCCee--eEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEE------CCeEEEEE
Q 006979 314 LFFVTDRKNGFW--NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ------NGRSYLGI 385 (623)
Q Consensus 314 l~~~~~~~~g~~--~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~------~g~~~L~~ 385 (623)
|+|.+.. .+.. .|+++|+++++.+.++.... .....+. .....|.+ ||+.|++...+ .+...||+
T Consensus 252 l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~--~~~~~~sp---dg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 252 LVYVSYL-KGSPDRFIYSADPETLENRQLTSMPA-CSHLMSN--YDGSLMVG---DGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp EEEEEEE-TTCCCEEEEEECTTTCCEEEEEEECC-EEEEEEC--TTSSEEEE---EECCC------------CCCCEEEE
T ss_pred EEEEecC-CCCCcceEEEEecCCCceEEEEcCCC-ceeeeec--CCCCeEcc---CCCcceeEeeeccccccCCCCEEEE
Confidence 8888876 4544 59999999998887765322 0011111 11122333 88888887654 66788999
Q ss_pred EeCCCCceeecccCCc-----------ceE--eeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 386 LDDFGHSLSLLDIPFT-----------DID--NITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 386 ~d~~~~~~~~lt~~~~-----------~v~--~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
+|+++++.++|+.... .+. .+++++++++|.... ....+||++++..+.
T Consensus 325 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 325 FNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPESV 386 (388)
T ss_dssp EETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGGG
T ss_pred EeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChhc
Confidence 9999999988886543 222 237888888887654 455689999987654
No 16
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=1e-18 Score=185.60 Aligned_cols=243 Identities=13% Similarity=0.125 Sum_probs=178.1
Q ss_pred CCEEEEEeCC--C---CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 154 GDTVIFSNYK--D---QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 154 ~d~l~f~~~~--~---~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
+++++|+... + +.|+++|++++ ..+.|+.. ......++|||||++|+++..+... ..|+++|+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~--~~~~l~~~----~~~v~~~~~Spdg~~la~~s~~~~~------~~i~~~d~ 210 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY--NQFVVHRS----PQPLMSPAWSPDGSKLAYVTFESGR------SALVIQTL 210 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC--SCEEEEEE----SSCEEEEEECTTSSEEEEEECTTSS------CEEEEEET
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC--CCEEEeCC----CCcceeeEEcCCCCEEEEEEecCCC------cEEEEEEC
Confidence 3467776543 2 57999999865 67777653 3456779999999999998875422 57999999
Q ss_pred CCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 229 ~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
.+++ .+.+.........++|||||++|+|..... ....||++|+.++ ....+.... ..+..+.|
T Consensus 211 ~tg~---~~~l~~~~~~~~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~~----~~~~l~~~~----~~~~~~~~ 274 (415)
T 2hqs_A 211 ANGA---VRQVASFPRHNGAPAFSPDGSKLAFALSKT-----GSLNLYVMDLASG----QIRQVTDGR----SNNTEPTW 274 (415)
T ss_dssp TTCC---EEEEECCSSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTC----CEEECCCCS----SCEEEEEE
T ss_pred CCCc---EEEeecCCCcccCEEEcCCCCEEEEEEecC-----CCceEEEEECCCC----CEEeCcCCC----CcccceEE
Confidence 9987 666665555667899999999999887433 2457999999876 233444433 45668999
Q ss_pred CCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 309 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 309 s~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
+|||+ |++.+++ .+..+||.+|+.+++.+.++........+.|++ +++.|++....++...|+++|
T Consensus 275 spdg~~l~~~s~~-~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp------------dG~~l~~~~~~~g~~~i~~~d 341 (415)
T 2hqs_A 275 FPDSQNLAFTSDQ-AGRPQVYKVNINGGAPQRITWEGSQNQDADVSS------------DGKFMVMVSSNGGQQHIAKQD 341 (415)
T ss_dssp CTTSSEEEEEECT-TSSCEEEEEETTSSCCEECCCSSSEEEEEEECT------------TSSEEEEEEECSSCEEEEEEE
T ss_pred CCCCCEEEEEECC-CCCcEEEEEECCCCCEEEEecCCCcccCeEECC------------CCCEEEEEECcCCceEEEEEE
Confidence 99999 8888876 577799999999888776654433333344443 899999988877888999999
Q ss_pred CCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcceee
Q 006979 388 DFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAV 439 (623)
Q Consensus 388 ~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~l 439 (623)
+++++.+.++... .+..+ ++++..+++..... ....||+++++++..++|
T Consensus 342 ~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~-~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 342 LATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQG-MGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp TTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEET-TEEEEEEEETTSCCEEEC
T ss_pred CCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCC-CccEEEEEECCCCcEEEe
Confidence 9999988887654 33333 77888887776543 345899999987765444
No 17
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=9.6e-18 Score=190.85 Aligned_cols=315 Identities=11% Similarity=0.041 Sum_probs=202.3
Q ss_pred CCcCCHHHHhccC--CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEE
Q 006979 76 KSPLTADVVSGAS--KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRI 152 (623)
Q Consensus 76 ~s~~t~~~~~~~~--~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~ 152 (623)
..++|++.++... .....+.|+| |+.+ +. . .+|. |+.++..+| +.+.++... .. ..++..++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~~-~~-~---~dg~--i~~~d~~~g-~~~~~~~~~-~~----~~~~v~~~~~ 68 (723)
T 1xfd_A 2 KKKVTVEDLFSEDFKIHDPEAKWISDTEFI-YR-E---QKGT--VRLWNVETN-TSTVLIEGK-KI----ESLRAIRYEI 68 (723)
T ss_dssp CCCCCHHHHTCTTTCCCCCCCCBSSSSCBC-CC-C---SSSC--EEEBCGGGC-CCEEEECTT-TT----TTTTCSEEEE
T ss_pred CccccHHHHhCCCCcccccccEEcCCCcEE-EE-e---CCCC--EEEEECCCC-cEEEEeccc-cc----cccccceEEE
Confidence 3568999998753 2357889999 5533 22 1 2354 555555543 444444322 00 0123556777
Q ss_pred eCC--EEEEEeCC--------CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 006979 153 FGD--TVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 153 s~d--~l~f~~~~--------~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~ 222 (623)
++| .|++.... ++.||++|++++ ..++|+.... .......++|||||++|+|+.. .+
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~----------~~ 135 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG--DPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE----------NN 135 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC--CCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET----------TE
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCC--ceEeccCCcc-ccccccccEECCCCCEEEEEEC----------Ce
Confidence 777 67777542 267999999987 5677775411 1123567899999999999875 46
Q ss_pred EEEEEcCCCCcccceecccCC-Cc------------------ccceeeCCCCCEEEEEEecCCCC---------------
Q 006979 223 IVAIALNGQNIQEPKVLVSGS-DF------------------YAFPRMDPRGERMAWIEWHHPNM--------------- 268 (623)
Q Consensus 223 L~~idl~~g~~~~~~~l~~~~-~~------------------~~~p~wSPDG~~la~~~~~~~~~--------------- 268 (623)
|+++|+++++ .++++... .. ...+.|||||++|+|.+.+....
T Consensus 136 i~~~~~~~g~---~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~ 212 (723)
T 1xfd_A 136 IYYCAHVGKQ---AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPT 212 (723)
T ss_dssp EEEESSSSSC---CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCC
T ss_pred EEEEECCCCc---eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCc
Confidence 9999999987 66665432 11 14689999999999998664211
Q ss_pred -----------CCCceEEEEEEecCCCceeeeEEEcCCCC--CccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCC
Q 006979 269 -----------PWDKAELWVGYISENGDVYKRVCVAGFDP--TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESN 334 (623)
Q Consensus 269 -----------p~~~~~L~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~ 334 (623)
......|+++|++++. ....+..... .....+..+.|+|||+ +++..++..+...|+++|+.+
T Consensus 213 ~~~~~~~~~G~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 213 VKPYHYPKAGSENPSISLHVIGLNGPT---HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp CEEEECCBTTSCCCEEEEEEEESSSSC---CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred ceeccCCCCCCCCCeeEEEEEECCCCc---eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 0113478999988763 1223332210 0004566799999999 545555534567899999999
Q ss_pred CeEEEEeecc--ccc----ccccccccCcceeEEeecCCCCEEEEE-EEECC----eEEEEEEe-CCCCc---eeecccC
Q 006979 335 NEVLAIYSLD--AEF----SRPLWVFGINSYEIIQSHGEKNLIACS-YRQNG----RSYLGILD-DFGHS---LSLLDIP 399 (623)
Q Consensus 335 ~~~~~l~~~~--~~~----~~~~w~~~~~~~~~l~~s~~~~~l~~~-~~~~g----~~~L~~~d-~~~~~---~~~lt~~ 399 (623)
++.+.+.... ..+ ..+.|++ ||+.|++. +.+++ ..+||++| ..+++ .++|+.+
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~sp------------dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~ 357 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSK------------DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG 357 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECT------------TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS
T ss_pred CcceEEEEeccCCEEeccCCCceEcC------------CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC
Confidence 8877665331 111 1344443 88888887 66777 78999999 67777 7888865
Q ss_pred CcceE---eeeecCCEEEEEEecC-CCCCeEEEEEcCCC
Q 006979 400 FTDID---NITLGNDCLFVEGASG-VEPSSVAKVTLDDH 434 (623)
Q Consensus 400 ~~~v~---~~~~~~~~~~~~~~s~-~~~~~ly~~~l~~~ 434 (623)
.+.+. .++++++.+++.+... ....+||.++++++
T Consensus 358 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 358 DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 55443 2488999998887543 24567999987765
No 18
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=3.8e-18 Score=194.20 Aligned_cols=306 Identities=10% Similarity=0.048 Sum_probs=196.5
Q ss_pred cCCHHHHhccC--CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC
Q 006979 78 PLTADVVSGAS--KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD 155 (623)
Q Consensus 78 ~~t~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d 155 (623)
++|++.++... ..-..+.|+|++.+.+.. +++. |+.++..+| +.+.++... .. ..++..++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~----~d~~--i~~~~~~~g-~~~~~~~~~-~~----~~~~~~~~~~SpD 70 (719)
T 1z68_A 3 ALTLKDILNGTFSYKTFFPNWISGQEYLHQS----ADNN--IVLYNIETG-QSYTILSNR-TM----KSVNASNYGLSPD 70 (719)
T ss_dssp CCCHHHHHHTTTCCCCCCCEESSSSEEEEEC----TTSC--EEEEESSSC-CEEEEECHH-HH----HTTTCSEEEECTT
T ss_pred cccHHHHhcCcccCCCCccEECCCCeEEEEc----CCCC--EEEEEcCCC-cEEEEEccc-cc----cccceeeEEECCC
Confidence 47888887742 122478999844444332 1354 455555433 455554321 00 0123567778776
Q ss_pred --EEEEEeCC--------CCcEEEEeCCCCCCCc---eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 006979 156 --TVIFSNYK--------DQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 156 --~l~f~~~~--------~~~l~~~d~~~g~~~~---~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~ 222 (623)
.|+|.... ++.|+++|++++ .. ++|+. ....+.|||||++|+|+.. +.
T Consensus 71 g~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~l~~-------~~~~~~~SPDG~~la~~~~----------~~ 131 (719)
T 1z68_A 71 RQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNELPR-------PIQYLCWSPVGSKLAYVYQ----------NN 131 (719)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCCCS-------SBCCEEECSSTTCEEEEET----------TE
T ss_pred CCeEEEEecCceeEEeecceEEEEEECCCC--ccccceecCc-------ccccceECCCCCEEEEEEC----------Ce
Confidence 67776542 467999999887 44 44542 2567899999999999853 47
Q ss_pred EEEEEcCCCCcccceecccCCC-------------------cccceeeCCCCCEEEEEEecCCCCC--------------
Q 006979 223 IVAIALNGQNIQEPKVLVSGSD-------------------FYAFPRMDPRGERMAWIEWHHPNMP-------------- 269 (623)
Q Consensus 223 L~~idl~~g~~~~~~~l~~~~~-------------------~~~~p~wSPDG~~la~~~~~~~~~p-------------- 269 (623)
|+++|+++++ .++++.... ....+.|||||++|+|.+.+...++
T Consensus 132 i~~~~~~~g~---~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~ 208 (719)
T 1z68_A 132 IYLKQRPGDP---PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR 208 (719)
T ss_dssp EEEESSTTSC---CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred EEEEeCCCCC---cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence 9999999887 666653321 1146899999999999987643211
Q ss_pred ------------CCceEEEEEEecCCCceeeeEE-----EcCCCCCccccCcCceeCCCCcEEEEE-eCCCCeeeEEEEe
Q 006979 270 ------------WDKAELWVGYISENGDVYKRVC-----VAGFDPTIVESPTEPKWSSKGELFFVT-DRKNGFWNLHKWI 331 (623)
Q Consensus 270 ------------~~~~~L~v~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ws~DG~l~~~~-~~~~g~~~L~~~d 331 (623)
.....|+++|++++..+....+ +.+.. ..+..+.|+|||++++.. ++..+...|+.+|
T Consensus 209 ~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 209 TINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD----YYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC----EEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred ceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc----ceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 1345788999876521000111 11222 456789999998855543 4434567899999
Q ss_pred ----cCCCeEEEEee---c--ccccc-----cccccccCcceeEEeecCCCCEEEE-EEEECCeEEEEEEeCCCCceeec
Q 006979 332 ----ESNNEVLAIYS---L--DAEFS-----RPLWVFGINSYEIIQSHGEKNLIAC-SYRQNGRSYLGILDDFGHSLSLL 396 (623)
Q Consensus 332 ----~~~~~~~~l~~---~--~~~~~-----~~~w~~~~~~~~~l~~s~~~~~l~~-~~~~~g~~~L~~~d~~~~~~~~l 396 (623)
+.+++.+.++. + ...+. .+.|+ ||++.+++ .+.++|..+||++|+++++.++|
T Consensus 285 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s------------pdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~l 352 (719)
T 1z68_A 285 FREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFS------------YDAISYYKIFSDKDGYKHIHYIKDTVENAIQI 352 (719)
T ss_dssp ECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEEC------------TTSSCEEEEEECTTSCEEEEEESSCSTTCEEC
T ss_pred ccCCCCCCceEEEEecccccCCceEccccCCccEEC------------CCCCeEEEEEEccCCceEEEEEECCCCceEec
Confidence 87877665552 1 11111 33343 38888777 45578899999999999998899
Q ss_pred ccCCcceEee--eecCCEEEEEEec---CCCCCeEEEEEcCCC
Q 006979 397 DIPFTDIDNI--TLGNDCLFVEGAS---GVEPSSVAKVTLDDH 434 (623)
Q Consensus 397 t~~~~~v~~~--~~~~~~~~~~~~s---~~~~~~ly~~~l~~~ 434 (623)
+.+.+.+..+ . +++.++|.+.. .....+||.++++++
T Consensus 353 t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 353 TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 8776665544 5 88888888754 134568999998766
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.79 E-value=5.2e-17 Score=172.45 Aligned_cols=256 Identities=11% Similarity=0.053 Sum_probs=178.2
Q ss_pred CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCC--CcEEEEeCCC
Q 006979 99 HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKD--QRLYKHSIDS 174 (623)
Q Consensus 99 ~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~--~~l~~~d~~~ 174 (623)
++++.++.....++....|+.++.. ++..+.+.... ....+.++++| .+++..... ..|+++|+.+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~---------~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t 212 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSP---------QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN 212 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEES---------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCC---------CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC
Confidence 6677777655322212456666554 22333333211 11344566655 677776543 4799999998
Q ss_pred CCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCC
Q 006979 175 KDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPR 254 (623)
Q Consensus 175 g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPD 254 (623)
+ ..+.++.. ......++|||||++|+++...... ..||++|+.+++ .+.+.........+.||||
T Consensus 213 g--~~~~l~~~----~~~~~~~~~spdg~~la~~~~~~g~------~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spd 277 (415)
T 2hqs_A 213 G--AVRQVASF----PRHNGAPAFSPDGSKLAFALSKTGS------LNLYVMDLASGQ---IRQVTDGRSNNTEPTWFPD 277 (415)
T ss_dssp C--CEEEEECC----SSCEEEEEECTTSSEEEEEECTTSS------CEEEEEETTTCC---EEECCCCSSCEEEEEECTT
T ss_pred C--cEEEeecC----CCcccCEEEcCCCCEEEEEEecCCC------ceEEEEECCCCC---EEeCcCCCCcccceEECCC
Confidence 7 66667653 3346678999999999987654322 679999999987 6777766666678999999
Q ss_pred CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecC
Q 006979 255 GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIES 333 (623)
Q Consensus 255 G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~ 333 (623)
|++|++...+. ...+||++|++++. ...+.... ..+..+.|+|||+ |++.+.. .+...|+.+|+.
T Consensus 278 g~~l~~~s~~~-----g~~~i~~~d~~~~~----~~~l~~~~----~~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~ 343 (415)
T 2hqs_A 278 SQNLAFTSDQA-----GRPQVYKVNINGGA----PQRITWEG----SQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLA 343 (415)
T ss_dssp SSEEEEEECTT-----SSCEEEEEETTSSC----CEECCCSS----SEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETT
T ss_pred CCEEEEEECCC-----CCcEEEEEECCCCC----EEEEecCC----CcccCeEECCCCCEEEEEECc-CCceEEEEEECC
Confidence 99999998432 24579999998762 23333332 3456789999999 7776665 567899999999
Q ss_pred CCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcceEee
Q 006979 334 NNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI 406 (623)
Q Consensus 334 ~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~~ 406 (623)
+++.+.+.... .+..+.|++ +++.|++.+..++...||++|++++..++|+.....+..+
T Consensus 344 ~~~~~~l~~~~-~~~~~~~sp------------dg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~ 403 (415)
T 2hqs_A 344 TGGVQVLSSTF-LDETPSLAP------------NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFP 403 (415)
T ss_dssp TCCEEECCCSS-SCEEEEECT------------TSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEE
T ss_pred CCCEEEecCCC-CcCCeEEcC------------CCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCC
Confidence 98887766432 344445543 8999999998889999999999999899988776665544
No 20
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.75 E-value=2.9e-16 Score=178.24 Aligned_cols=308 Identities=12% Similarity=0.091 Sum_probs=194.5
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCC--cccCCCC-C-------ccceeeeecCCceEEEeCC-EEE
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEP--SDITPKE-Y-------AVRTTAQEYGGGAFRIFGD-TVI 158 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~--~~l~p~~-~-------~~r~~~~~~g~~~~~~s~d-~l~ 158 (623)
.+..+.|+ ++.+++... ++ | .++..+| +. +.++... . ....++...++.++++++| .++
T Consensus 27 ~~~~~~w~-g~~~~~~~~----~~---i-~~d~~tg-~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~ 96 (706)
T 2z3z_A 27 YVVGLQWM-GDNYVFIEG----DD---L-VFNKANG-KSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVV 96 (706)
T ss_dssp -CTTCEEE-TTEEEEEET----TE---E-EEEC--------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEE
T ss_pred cCCCCcCc-CCeEEEEeC----Cc---E-EEECCCC-cEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEE
Confidence 45678888 777666541 23 3 4455443 33 3333210 0 0001222345667888877 677
Q ss_pred EEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC-----CCc
Q 006979 159 FSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-----QNI 233 (623)
Q Consensus 159 f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~-----g~~ 233 (623)
+.. ++.|+++|+.++ ..++++.. .....+++|||||++|+++.. ..|+++|+++ ++
T Consensus 97 ~~~--~~~i~~~d~~~~--~~~~l~~~----~~~~~~~~~SpdG~~la~~~~----------~~i~v~~~~~~~~~~g~- 157 (706)
T 2z3z_A 97 LFT--QGGLVGFDMLAR--KVTYLFDT----NEETASLDFSPVGDRVAYVRN----------HNLYIARGGKLGEGMSR- 157 (706)
T ss_dssp EEE--TTEEEEEETTTT--EEEEEECC----TTCCTTCEECTTSSEEEEEET----------TEEEEEECBCTTSCCCC-
T ss_pred EEE--CCEEEEEECCCC--ceEEccCC----cccccCCcCCCCCCEEEEEEC----------CeEEEEecCcccccCCC-
Confidence 764 478999999887 66676654 334677999999999999643 5699999998 77
Q ss_pred ccceecccCCCc---------------ccceeeCCCCCEEEEEEecCCCC-------------------------CCCce
Q 006979 234 QEPKVLVSGSDF---------------YAFPRMDPRGERMAWIEWHHPNM-------------------------PWDKA 273 (623)
Q Consensus 234 ~~~~~l~~~~~~---------------~~~p~wSPDG~~la~~~~~~~~~-------------------------p~~~~ 273 (623)
.++++..... ...+.|||||++|++.+.+.... .....
T Consensus 158 --~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 158 --AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp --CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred --cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 6666543322 36789999999999998554321 11346
Q ss_pred EEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeC-CCCeeeEEEEecCCC-eEEEEeecccccccc
Q 006979 274 ELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDR-KNGFWNLHKWIESNN-EVLAIYSLDAEFSRP 350 (623)
Q Consensus 274 ~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~-~~g~~~L~~~d~~~~-~~~~l~~~~~~~~~~ 350 (623)
.|+++|++++. ...+....... ..+..+.|+|||+ +++.+.. ......|+.+|+.++ +.+.+..+. ..
T Consensus 236 ~l~~~d~~~~~---~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~----~~ 306 (706)
T 2z3z_A 236 TVGIYHLATGK---TVYLQTGEPKE--KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET----DK 306 (706)
T ss_dssp EEEEEETTTTE---EEECCCCSCTT--CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE----CS
T ss_pred EEEEEECCCCc---eEeeccCCCCc--eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc----CC
Confidence 79999998762 22222221111 4567899999999 7665533 234568999999998 666665331 11
Q ss_pred cccccCcceeEEeecC-CCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcceEe---eeecCCEEEEEEecCC-CCCe
Q 006979 351 LWVFGINSYEIIQSHG-EKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDN---ITLGNDCLFVEGASGV-EPSS 425 (623)
Q Consensus 351 ~w~~~~~~~~~l~~s~-~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~---~~~~~~~~~~~~~s~~-~~~~ 425 (623)
.|........|. | +++.+++++.++|..+||.++.+++.++.|+.+.+.+.. ++++++.+++.+.... ....
T Consensus 307 ~~~~~~~~~~~s---p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 307 HYVEPLHPLTFL---PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp SCCCCCSCCEEC---TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred CeECccCCceee---cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 222111222332 3 044577777788999999999888888899887665543 3788888888876432 2358
Q ss_pred EEEEEcCCCcceeee
Q 006979 426 VAKVTLDDHKLKAVD 440 (623)
Q Consensus 426 ly~~~l~~~~~~~lt 440 (623)
||.+++++++.+.|+
T Consensus 384 l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 384 FYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEEEETTCCCCEESC
T ss_pred EEEEEcCCCCceecc
Confidence 999999888766654
No 21
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=1.6e-17 Score=174.02 Aligned_cols=320 Identities=12% Similarity=0.079 Sum_probs=198.3
Q ss_pred cccCCCCCCCcCCHHH---HhccCCc-----cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCcc
Q 006979 68 ITAPYGSWKSPLTADV---VSGASKR-----LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAV 138 (623)
Q Consensus 68 ~~~~~g~w~s~~t~~~---~~~~~~~-----~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~ 138 (623)
...+|++|..+.+-+. +...... +..+.||| |+.++|+..+ ++...||.++..++ +.+.++....
T Consensus 7 ~~~~~~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~---~g~~~l~~~d~~~~-~~~~l~~~~~-- 80 (396)
T 3c5m_A 7 ITLNFETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDF---DGNRNYYLLNLETQ-QAVQLTEGKG-- 80 (396)
T ss_dssp EECCEEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---TSSCEEEEEETTTT-EEEECCCSSC--
T ss_pred cchhhheeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEec---CCCceEEEEECCCC-cEEEeecCCC--
Confidence 4578888877765433 2222222 67889999 8888888755 35556787776533 4455543320
Q ss_pred ceeeeecCCceEEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecc-------------------ee
Q 006979 139 RTTAQEYGGGAFRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYAD-------------------GI 197 (623)
Q Consensus 139 r~~~~~~g~~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d-------------------~~ 197 (623)
.......+++| .|+|.... ++||+++++++ ..++++... .....+ ..
T Consensus 81 ------~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~--~~~~~~~~~---~~~~~~g~~l~~~~~~~~~~~~~~~~~ 148 (396)
T 3c5m_A 81 ------DNTFGGFISTDERAFFYVKNE-LNLMKVDLETL--EEQVIYTVD---EEWKGYGTWVANSDCTKLVGIEILKRD 148 (396)
T ss_dssp ------BCTTTCEECTTSSEEEEEETT-TEEEEEETTTC--CEEEEEECC---TTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred ------CccccceECCCCCEEEEEEcC-CcEEEEECCCC--CcEEEEecc---cccCCCCCEEEeccCCccccccccccc
Confidence 00111344544 78787654 46999999887 666666531 111111 34
Q ss_pred eCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCC-CCCEEEEEEecCCCCCCCceEEE
Q 006979 198 FDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELW 276 (623)
Q Consensus 198 ~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~ 276 (623)
|+|||+++++...... .....|+++|+++++ .+.+.........+.||| ||++|+|+.. ... .....+||
T Consensus 149 ~spdg~~~~~~~~~~~----~~~~~l~~~d~~~g~---~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~-~~~~~~l~ 219 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHT----NPTCRLIKVDIETGE---LEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPH-DLVDARMW 219 (396)
T ss_dssp CCCCCSHHHHHHHHHT----CCCEEEEEEETTTCC---EEEEEEESSCEEEEEEETTEEEEEEEEEC-SCS-SSCSCCCE
T ss_pred cCCCCcceeeeeeccC----CCcceEEEEECCCCc---EEeeccCCcccccceECCCCCCEEEEEec-CCC-CCCCceEE
Confidence 6666666554321000 123789999999987 666665555567789999 8999999973 211 00125799
Q ss_pred EEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeee--EEEEecCCCeEEEEeeccccccccccc
Q 006979 277 VGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN--LHKWIESNNEVLAIYSLDAEFSRPLWV 353 (623)
Q Consensus 277 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~--L~~~d~~~~~~~~l~~~~~~~~~~~w~ 353 (623)
+++++++. .+.+....+. ..+..+.|+|||+ |++.+.. .+... |+++|+.+++.+.+..... .. +.|
T Consensus 220 ~~d~~~~~----~~~l~~~~~~--~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~- 289 (396)
T 3c5m_A 220 LVNEDGSN----VRKIKEHAEG--ESCTHEFWIPDGSAMAYVSYF-KGQTDRVIYKANPETLENEEVMVMPP-CS-HLM- 289 (396)
T ss_dssp EEETTSCC----CEESSCCCTT--EEEEEEEECTTSSCEEEEEEE-TTTCCEEEEEECTTTCCEEEEEECCS-EE-EEE-
T ss_pred EEECCCCc----eeEeeccCCC--ccccceEECCCCCEEEEEecC-CCCccceEEEEECCCCCeEEeeeCCC-CC-CCc-
Confidence 99987652 2233322111 3456789999999 8888766 45544 9999999888777764321 11 223
Q ss_pred ccCcceeEEeecC-CCCEEEEEEE-------------ECCeEEEEEEeCCCCceeecccCCcc-----------e--Eee
Q 006979 354 FGINSYEIIQSHG-EKNLIACSYR-------------QNGRSYLGILDDFGHSLSLLDIPFTD-----------I--DNI 406 (623)
Q Consensus 354 ~~~~~~~~l~~s~-~~~~l~~~~~-------------~~g~~~L~~~d~~~~~~~~lt~~~~~-----------v--~~~ 406 (623)
++ +++.+++... ..+...||++|+++++.++|+..... . ..+
T Consensus 290 -----------s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 358 (396)
T 3c5m_A 290 -----------SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSF 358 (396)
T ss_dssp -----------ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEE
T ss_pred -----------cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceE
Confidence 23 6665554321 13557899999999888877754331 1 123
Q ss_pred eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 407 TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 407 ~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+++++.+++..... ...+||.+++++++.
T Consensus 359 s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 359 TPNDDGVLFTSDFE-GVPAIYIADVPESYK 387 (396)
T ss_dssp CTTSSEEEEEECTT-SSCEEEEEECCTTCC
T ss_pred ccCCCeEEEEecCC-CCceEEEEEEccccc
Confidence 77888888876543 456899999988764
No 22
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=5e-16 Score=154.87 Aligned_cols=232 Identities=10% Similarity=0.039 Sum_probs=166.7
Q ss_pred CCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC-CCcccceeccc
Q 006979 163 KDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQEPKVLVS 241 (623)
Q Consensus 163 ~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~-g~~~~~~~l~~ 241 (623)
.++.|+++|+.++ ..+.+... ......+.|||||++|++... ..|+++|+++ ++ ...+..
T Consensus 20 ~~~~i~~~d~~~~--~~~~~~~~----~~~v~~~~~spdg~~l~~~~~----------~~i~~~d~~~~~~---~~~~~~ 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTR--KMRVVWQT----PELFEAPNWSPDGKYLLLNSE----------GLLYRLSLAGDPS---PEKVDT 80 (297)
T ss_dssp CCEEEEEEETTTT--EEEEEEEE----SSCCEEEEECTTSSEEEEEET----------TEEEEEESSSCCS---CEECCC
T ss_pred cceeEEEEeCCCC--ceeeeccC----CcceEeeEECCCCCEEEEEcC----------CeEEEEeCCCCCC---ceEecc
Confidence 4567999999877 55555543 334567899999999988642 5699999998 87 566654
Q ss_pred CC--CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEE
Q 006979 242 GS--DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVT 318 (623)
Q Consensus 242 ~~--~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~ 318 (623)
.. .....+.|||||++|++...+.. ....||.+++.++ ....+.... ....+.|+|||+ +++..
T Consensus 81 ~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~l~~~~~~~~----~~~~~~~~~-----~~~~~~~spdg~~l~~~~ 147 (297)
T 2ojh_A 81 GFATICNNDHGISPDGALYAISDKVEF----GKSAIYLLPSTGG----TPRLMTKNL-----PSYWHGWSPDGKSFTYCG 147 (297)
T ss_dssp TTCCCBCSCCEECTTSSEEEEEECTTT----SSCEEEEEETTCC----CCEECCSSS-----SEEEEEECTTSSEEEEEE
T ss_pred ccccccccceEECCCCCEEEEEEeCCC----CcceEEEEECCCC----ceEEeecCC-----CccceEECCCCCEEEEEE
Confidence 43 45667899999999999874432 2567999988765 233333322 245679999999 77666
Q ss_pred eCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeeccc
Q 006979 319 DRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDI 398 (623)
Q Consensus 319 ~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~ 398 (623)
.. .+..+||.++..+++.+.+......+..+.|++ +++.+++....++..+||.++..++..+.+..
T Consensus 148 ~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~------------dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 148 IR-DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSP------------DGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EE-TTEEEEEEEETTTCCEEECCCSSSCEEEEEECT------------TSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred CC-CCceEEEEEECCCCcceEcccCCCccccceECC------------CCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 65 677899999988887777765444444444543 88888888877888999999988888888876
Q ss_pred CCcceEee--eecCCEEEEEEecCC-------CCCeEEEEEcCCCcceee
Q 006979 399 PFTDIDNI--TLGNDCLFVEGASGV-------EPSSVAKVTLDDHKLKAV 439 (623)
Q Consensus 399 ~~~~v~~~--~~~~~~~~~~~~s~~-------~~~~ly~~~l~~~~~~~l 439 (623)
....+..+ +++++.+++...... ....|+++++++++.+.+
T Consensus 215 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 55444444 778888888776433 235799999998876544
No 23
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=6.3e-16 Score=159.20 Aligned_cols=297 Identities=11% Similarity=0.066 Sum_probs=184.1
Q ss_pred CcCCHHHHhccCCccCceEEcCCCcEEEEeecCC---CCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEe
Q 006979 77 SPLTADVVSGASKRLGGTAVDGHGRLIWLESRPT---EAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF 153 (623)
Q Consensus 77 s~~t~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s 153 (623)
.+++++.+... ..+..+.++ |+.++|+...+. +.....||.++..++ +.+.+ . ......++
T Consensus 4 ~~~~~~~l~~~-~~~~~~~~d-G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~l--~-----------~~~~~~~S 67 (347)
T 2gop_A 4 IEWNEKTFAKF-AYLSDPRTK-GELVAYVLTKANLKDNKYENTIVIENLKNN-ARRFI--E-----------NATMPRIS 67 (347)
T ss_dssp ------CCCCS-CEEEEEEEE-TTEEEEEEEEEETTTTEEEEEEEEEETTTC-CEEEE--E-----------SCEEEEEC
T ss_pred ccCCcccceee-EEcccceEC-CcEEEEEEeecCcccCCccceEEEEeCCCC-ceEEc--c-----------cCCCeEEC
Confidence 45677776643 456677775 889998864432 123566887776533 33333 1 13455666
Q ss_pred CC--EEEEEeCCC----CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCC-----------
Q 006979 154 GD--TVIFSNYKD----QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDA----------- 216 (623)
Q Consensus 154 ~d--~l~f~~~~~----~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~----------- 216 (623)
+| .|+|..... .+||+++++++ ..++++.. .. ...+.|||||++|++...+.....
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~----~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLETL--SSKKILEA----KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAW 140 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTTT--EEEEEEEE----SE-EEEEEECTTSSEEEEEEECCCC---------CCCC
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCCC--ceEEEEcC----CC-ccceeECCCCCEEEEEEccCCCcCCcEEEccccee
Confidence 55 788876432 35999999887 67777764 33 678899999999999875311000
Q ss_pred -------CCceeEEEEEEcCCCCcccc-eecccCCCcccceeeCCCCCEEEEEEecCCCCC--CCceEEEEEEecCCCce
Q 006979 217 -------LNSTTEIVAIALNGQNIQEP-KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMP--WDKAELWVGYISENGDV 286 (623)
Q Consensus 217 -------~~~~~~L~~idl~~g~~~~~-~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p--~~~~~L~v~d~~~~~~~ 286 (623)
......||++|+++++ . +.++. . ....+.||||| |+|+.......+ ....+||+++ ++ .
T Consensus 141 ~~g~~~~~~~~~~l~~~d~~~~~---~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~-~- 209 (347)
T 2gop_A 141 FDDLGFFDGEKTTFWIFDTESEE---VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DG-K- 209 (347)
T ss_dssp ---------CEEEEEEEETTTTE---EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TT-E-
T ss_pred ecCcccccCccceEEEEECCCCe---EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CC-c-
Confidence 0124789999999887 5 66665 3 56678999999 777764332211 1145799988 33 1
Q ss_pred eeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCC----CeeeEEEEecCCCeEEEEeec-cccccc-ccccccCcce
Q 006979 287 YKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKN----GFWNLHKWIESNNEVLAIYSL-DAEFSR-PLWVFGINSY 359 (623)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~----g~~~L~~~d~~~~~~~~l~~~-~~~~~~-~~w~~~~~~~ 359 (623)
...+..+ . . ...++|||+ +++.+.... ...+|+.+| +++.+.++.. +..+.. +.|
T Consensus 210 -~~~l~~~-~-----~--~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~------- 271 (347)
T 2gop_A 210 -EEKMFEK-V-----S--FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIK------- 271 (347)
T ss_dssp -EEEEEEE-E-----S--EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEE-------
T ss_pred -eEEeccC-c-----c--eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEE-------
Confidence 2333322 2 1 123499999 888876521 246899998 6666666643 222221 222
Q ss_pred eEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcceee
Q 006979 360 EIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAV 439 (623)
Q Consensus 360 ~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~l 439 (623)
+ ++ ++++...++..+|| ++ + ++.+.+......+..+.... .++++.++...+.+||.++ ++.++|
T Consensus 272 -----s-dg--~~~~~~~~~~~~l~-~~-~-g~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~---g~~~~l 336 (347)
T 2gop_A 272 -----D-GK--VYFTLFEEGSVNLY-IW-D-GEIKPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD---GEEKQL 336 (347)
T ss_dssp -----T-TE--EEEEEEETTEEEEE-EE-S-SSEEEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES---SSEEEC
T ss_pred -----c-Cc--EEEEEecCCcEEEE-Ec-C-CceEEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC---CcEEEe
Confidence 2 43 88888889999999 98 4 56666665555566663334 6888888888888999987 555444
Q ss_pred e
Q 006979 440 D 440 (623)
Q Consensus 440 t 440 (623)
|
T Consensus 337 t 337 (347)
T 2gop_A 337 T 337 (347)
T ss_dssp C
T ss_pred c
Confidence 3
No 24
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=5.9e-16 Score=161.98 Aligned_cols=254 Identities=10% Similarity=0.094 Sum_probs=167.4
Q ss_pred EEEeCCEEEEEeCCCC--cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 150 FRIFGDTVIFSNYKDQ--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 150 ~~~s~d~l~f~~~~~~--~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
|.+++..|+|....++ +||++|++++ ..++++... ......+.|||||++|+|+..+ ..|+++|
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~g--~~~~lt~~~---~~~~~~~~~spdg~~l~~~~~~---------~~l~~~d 108 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNTQ--VATQLTEGR---GDNTFGGFLSPDDDALFYVKDG---------RNLMRVD 108 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTC--EEEECCCSS---CBCSSSCEECTTSSEEEEEETT---------TEEEEEE
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCCC--ceEEeeeCC---CCCccceEEcCCCCEEEEEeCC---------CeEEEEE
Confidence 3333447888876555 5999999988 788888751 1222357899999999998753 4699999
Q ss_pred cCCCCcccceecccCC-Cccccee--eCCCCCEEEEEEecCCCC-C-------------CCceEEEEEEecCCCceeeeE
Q 006979 228 LNGQNIQEPKVLVSGS-DFYAFPR--MDPRGERMAWIEWHHPNM-P-------------WDKAELWVGYISENGDVYKRV 290 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~-~~~~~p~--wSPDG~~la~~~~~~~~~-p-------------~~~~~L~v~d~~~~~~~~~~~ 290 (623)
+++++ .+.+.... .+..... ++|||+.|+....+.... | .....|+++|+.++. ...
T Consensus 109 ~~~g~---~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~---~~~ 182 (388)
T 3pe7_A 109 LATLE---ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE---STV 182 (388)
T ss_dssp TTTCC---EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC---EEE
T ss_pred CCCCc---ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc---eEE
Confidence 99987 55554332 2222223 499999998765332110 0 024789999998772 233
Q ss_pred EEcCCCCCccccCcCceeCC-CCc-EEEEEeCCC--CeeeEEEEecCCCeEEEEeeccc--ccccccccccCcceeEEee
Q 006979 291 CVAGFDPTIVESPTEPKWSS-KGE-LFFVTDRKN--GFWNLHKWIESNNEVLAIYSLDA--EFSRPLWVFGINSYEIIQS 364 (623)
Q Consensus 291 ~~~~~~~~~~~~~~~~~ws~-DG~-l~~~~~~~~--g~~~L~~~d~~~~~~~~l~~~~~--~~~~~~w~~~~~~~~~l~~ 364 (623)
+. ... ..+..+.|+| ||+ ++|...... +..+||.+|+++++.+.++.... .+..+.|++
T Consensus 183 l~-~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp---------- 247 (388)
T 3pe7_A 183 IL-QEN----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVP---------- 247 (388)
T ss_dssp EE-EES----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECT----------
T ss_pred ee-cCC----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECC----------
Confidence 33 323 3456899999 999 878776411 25689999998888887775431 233445544
Q ss_pred cCCCCEEEEEEEECCeE--EEEEEeCCCCceeecccCCcc------e--EeeeecCCEEEEEEec-----CCCCCeEEEE
Q 006979 365 HGEKNLIACSYRQNGRS--YLGILDDFGHSLSLLDIPFTD------I--DNITLGNDCLFVEGAS-----GVEPSSVAKV 429 (623)
Q Consensus 365 s~~~~~l~~~~~~~g~~--~L~~~d~~~~~~~~lt~~~~~------v--~~~~~~~~~~~~~~~s-----~~~~~~ly~~ 429 (623)
||+.|++.+.+.+.. .||++|+++++.++++..... . ..++++++.+++.... ......||++
T Consensus 248 --dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 248 --DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp --TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred --CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 899898888877765 499999999988777542221 1 1247888888876543 2455789999
Q ss_pred EcCCCcceeee
Q 006979 430 TLDDHKLKAVD 440 (623)
Q Consensus 430 ~l~~~~~~~lt 440 (623)
++++++.++|+
T Consensus 326 d~~~~~~~~l~ 336 (388)
T 3pe7_A 326 NMKNGTQHRVA 336 (388)
T ss_dssp ETTTTEEEEEE
T ss_pred eccCCceEEec
Confidence 99998876554
No 25
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=7.6e-15 Score=146.24 Aligned_cols=233 Identities=12% Similarity=0.101 Sum_probs=159.6
Q ss_pred CceEEEeCC--EEEEEeCCCCcEEEEeCCC-CCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 006979 147 GGAFRIFGD--TVIFSNYKDQRLYKHSIDS-KDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 147 ~~~~~~s~d--~l~f~~~~~~~l~~~d~~~-g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L 223 (623)
..+..++++ .+++.. ++.|+++|+.+ + ....+... .......++.|+|||++|++...+... ...|
T Consensus 44 v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~--~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~-----~~~l 112 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS--EGLLYRLSLAGDP--SPEKVDTG--FATICNNDHGISPDGALYAISDKVEFG-----KSAI 112 (297)
T ss_dssp CEEEEECTTSSEEEEEE--TTEEEEEESSSCC--SCEECCCT--TCCCBCSCCEECTTSSEEEEEECTTTS-----SCEE
T ss_pred eEeeEECCCCCEEEEEc--CCeEEEEeCCCCC--CceEeccc--cccccccceEECCCCCEEEEEEeCCCC-----cceE
Confidence 445666665 556553 56799999998 7 56666643 112456789999999999998754322 2789
Q ss_pred EEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
|.+++.++. .+.+..... ...+.|||||++|+|..... ....||.++++++ ....+.... ..+
T Consensus 113 ~~~~~~~~~---~~~~~~~~~-~~~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~~~----~~~~~~~~~----~~~ 175 (297)
T 2ojh_A 113 YLLPSTGGT---PRLMTKNLP-SYWHGWSPDGKSFTYCGIRD-----QVFDIYSMDIDSG----VETRLTHGE----GRN 175 (297)
T ss_dssp EEEETTCCC---CEECCSSSS-EEEEEECTTSSEEEEEEEET-----TEEEEEEEETTTC----CEEECCCSS----SCE
T ss_pred EEEECCCCc---eEEeecCCC-ccceEECCCCCEEEEEECCC-----CceEEEEEECCCC----cceEcccCC----Ccc
Confidence 999998887 666665443 55689999999999877443 2456888877655 233333333 355
Q ss_pred cCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC----
Q 006979 304 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN---- 378 (623)
Q Consensus 304 ~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~---- 378 (623)
..+.|+|||+ +++.... .+..+||.+++.++..+.+......+..+.|++ +++.|++.....
T Consensus 176 ~~~~~s~dg~~l~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~------------dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSR-TGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP------------SGDKVVFVSYDADVFD 242 (297)
T ss_dssp EEEEECTTSSEEEEEECT-TSSCEEEEEETTSSCEEECCCCSEEEEEEEECT------------TSSEEEEEEEETTCCS
T ss_pred ccceECCCCCEEEEEecC-CCCccEEEECCCCCCcEEEecCCcccCCeEECC------------CCCEEEEEEcCCCCCc
Confidence 7899999999 6666655 577899999987877777765433333344443 888888887765
Q ss_pred ----CeEEEEEEeCCCCceeeccc---CCcceEee--eecCCEEEEEEecC
Q 006979 379 ----GRSYLGILDDFGHSLSLLDI---PFTDIDNI--TLGNDCLFVEGASG 420 (623)
Q Consensus 379 ----g~~~L~~~d~~~~~~~~lt~---~~~~v~~~--~~~~~~~~~~~~s~ 420 (623)
+...|+++|+++++.+.+.. ....+..+ +++++.+++.....
T Consensus 243 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 34789999999887765542 22233333 77888888877643
No 26
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=9.4e-16 Score=172.68 Aligned_cols=258 Identities=12% Similarity=0.070 Sum_probs=170.0
Q ss_pred CceEEEeCCEEEEEeCC---CC--cEEEEeCCCCCCCceecCCCCCCCCe---eec--ceeeC--CCCCE-EEEEEeccC
Q 006979 147 GGAFRIFGDTVIFSNYK---DQ--RLYKHSIDSKDSSPLPITPDYGEPLV---SYA--DGIFD--PRFNR-YVTVREDRR 213 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~---~~--~l~~~d~~~g~~~~~~Lt~~~~~~~~---~~~--d~~~s--PdG~~-l~~v~~~~~ 213 (623)
.....++++.++|+... ++ .||.+ ..++ ..++|+........ .+. .+.|+ |||++ |+|+....
T Consensus 26 ~~~~~~s~~~~~~~~~~~~~~~~~~l~~~-~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~- 101 (662)
T 3azo_A 26 PACVGAVGDEVWWVAPRPAEAGRATLVRR-RADG--AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD- 101 (662)
T ss_dssp CEEEEEETTEEEEEEEETTTTTEEEEEEE-CTTS--CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT-
T ss_pred cceeEEcCCeEEEEecCcccCCcEEEEEE-CCCC--CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCC-
Confidence 45667788888887642 22 47776 3444 67888875110000 011 34455 99999 88865431
Q ss_pred CCCCCceeEEEEEEcC--C-CCcccceeccc-----CCCcccceeeCCCCCEEEEEEecCCC-CC-CCceEEEEEEecCC
Q 006979 214 QDALNSTTEIVAIALN--G-QNIQEPKVLVS-----GSDFYAFPRMDPRGERMAWIEWHHPN-MP-WDKAELWVGYISEN 283 (623)
Q Consensus 214 ~~~~~~~~~L~~idl~--~-g~~~~~~~l~~-----~~~~~~~p~wSPDG~~la~~~~~~~~-~p-~~~~~L~v~d~~~~ 283 (623)
.+||+++++ + +. .++|+. .......++|||||++|+|.+.++.. .+ ....+||+++++++
T Consensus 102 -------~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 102 -------QRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp -------CCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred -------CeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 569999998 5 66 677776 23345678999999999999865210 00 12468999999872
Q ss_pred -----CceeeeEEEc-CCCCCccccCcCceeCCCCc-EEEEEeCCC----CeeeEEEEecC-CC---eEEEEeec-cccc
Q 006979 284 -----GDVYKRVCVA-GFDPTIVESPTEPKWSSKGE-LFFVTDRKN----GFWNLHKWIES-NN---EVLAIYSL-DAEF 347 (623)
Q Consensus 284 -----~~~~~~~~~~-~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~----g~~~L~~~d~~-~~---~~~~l~~~-~~~~ 347 (623)
+ ..+.+. ... ..+..+.|||||+ |+|.+.... +...|+.+|++ ++ +.+.++.. ...+
T Consensus 172 ~~~~~~---~~~~l~~~~~----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 172 AAADRS---AVRELSDDAH----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI 244 (662)
T ss_dssp TTTCGG---GSEESSCSCS----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE
T ss_pred ccccCC---ceeEEEecCC----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE
Confidence 2 233444 333 3556899999999 877775522 23689999998 56 56666654 3444
Q ss_pred ccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcce---------Eee-eecCCEEEEEE
Q 006979 348 SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDI---------DNI-TLGNDCLFVEG 417 (623)
Q Consensus 348 ~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v---------~~~-~~~~~~~~~~~ 417 (623)
..+.|++ ||+ +++++++++..+||++|+++++.++++.....+ ..+ ..+++++++..
T Consensus 245 ~~~~~sp------------dg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 245 AQAEWAP------------DGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp EEEEECT------------TSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred cceEECC------------CCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 4555654 777 888888888889999999888888877543221 122 22456677776
Q ss_pred ecCCCCCeEEEEEcCCCcceeee
Q 006979 418 ASGVEPSSVAKVTLDDHKLKAVD 440 (623)
Q Consensus 418 ~s~~~~~~ly~~~l~~~~~~~lt 440 (623)
.. ...+||.+++++++.++|+
T Consensus 312 ~~--~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 312 GK--GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp BS--SSCEEEEEETTTTEEEECC
T ss_pred Ec--CccEEEEEECCCCcEEEec
Confidence 55 5678999999888766554
No 27
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.69 E-value=6e-15 Score=168.27 Aligned_cols=260 Identities=17% Similarity=0.166 Sum_probs=170.5
Q ss_pred ceEEEeCC--EEEEEeCCCC-----cEEEEeCCCCCCCceecCCCCCCCC---------------------eeecceeeC
Q 006979 148 GAFRIFGD--TVIFSNYKDQ-----RLYKHSIDSKDSSPLPITPDYGEPL---------------------VSYADGIFD 199 (623)
Q Consensus 148 ~~~~~s~d--~l~f~~~~~~-----~l~~~d~~~g~~~~~~Lt~~~~~~~---------------------~~~~d~~~s 199 (623)
...++++| .|++....++ .|+++|++++ ..++++......+ .....+.||
T Consensus 40 ~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp EEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC--CEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCceEecCCCEEEEEeccCCCCcccEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 45566665 6788776455 7999999987 5655554310000 235678999
Q ss_pred CCCCEEEEEEeccCCCCCCceeEEEEEEcCCC---CcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEE
Q 006979 200 PRFNRYVTVREDRRQDALNSTTEIVAIALNGQ---NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELW 276 (623)
Q Consensus 200 PdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g---~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~ 276 (623)
|||++|++... ..|+++|++++ . .+++.........+.|||||++|+|.. + ..|+
T Consensus 118 pDg~~l~~~~~----------~~i~~~d~~~~~~~~---~~~l~~~~~~~~~~~~SPDG~~la~~~-~--------~~i~ 175 (741)
T 2ecf_A 118 PDAQRLLFPLG----------GELYLYDLKQEGKAA---VRQLTHGEGFATDAKLSPKGGFVSFIR-G--------RNLW 175 (741)
T ss_dssp TTSSEEEEEET----------TEEEEEESSSCSTTS---CCBCCCSSSCEEEEEECTTSSEEEEEE-T--------TEEE
T ss_pred CCCCEEEEEeC----------CcEEEEECCCCCcce---EEEcccCCcccccccCCCCCCEEEEEe-C--------CcEE
Confidence 99999999765 56999999988 6 667776656677899999999999996 2 1599
Q ss_pred EEEecCCCceeeeEEEcCCCC-------Ccc-----ccCcCceeCCCCc-EEEEEeCCC---------------------
Q 006979 277 VGYISENGDVYKRVCVAGFDP-------TIV-----ESPTEPKWSSKGE-LFFVTDRKN--------------------- 322 (623)
Q Consensus 277 v~d~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~ws~DG~-l~~~~~~~~--------------------- 322 (623)
++|++++. ..++...... +|. ..+..+.|||||+ |++.+....
T Consensus 176 ~~d~~~g~---~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 176 VIDLASGR---QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp EEETTTTE---EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred EEecCCCC---EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 99998762 2222222210 000 0146799999999 887764311
Q ss_pred --------CeeeEEEEecCC-CeEEEEeec---ccccccccccccC----------------------------------
Q 006979 323 --------GFWNLHKWIESN-NEVLAIYSL---DAEFSRPLWVFGI---------------------------------- 356 (623)
Q Consensus 323 --------g~~~L~~~d~~~-~~~~~l~~~---~~~~~~~~w~~~~---------------------------------- 356 (623)
+...|+.+|+++ ++.+.+... ...+..+.| +..
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence 233788888887 665544311 111111122 111
Q ss_pred --------cceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcceEe---eeecCCEEEEEEecCC-CCC
Q 006979 357 --------NSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDN---ITLGNDCLFVEGASGV-EPS 424 (623)
Q Consensus 357 --------~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~---~~~~~~~~~~~~~s~~-~~~ 424 (623)
..+.| +||++ +++++.++|..+||.++.+++ .+.|+.+.+.+.. ++++++.+++.+.... ...
T Consensus 332 ~~~~~~~~~~~~~---spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~ 406 (741)
T 2ecf_A 332 SPTWVPLHNSLRF---LDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARES 406 (741)
T ss_dssp CSSCCCCCSCCEE---CTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCB
T ss_pred CCCcCCcCCceEE---CCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceE
Confidence 12333 34776 777788888899999998877 8888877665543 4788888888876432 245
Q ss_pred eEEEEEcCCCcceeee
Q 006979 425 SVAKVTLDDHKLKAVD 440 (623)
Q Consensus 425 ~ly~~~l~~~~~~~lt 440 (623)
+||.++++++..++|+
T Consensus 407 ~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 407 QIYAVPLQGGQPQRLS 422 (741)
T ss_dssp EEEEEETTCCCCEECC
T ss_pred EEEEEEcCCCCeeecc
Confidence 7999988776666554
No 28
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.68 E-value=1.8e-16 Score=172.75 Aligned_cols=141 Identities=13% Similarity=0.164 Sum_probs=117.0
Q ss_pred CCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-----------------cC----CHH
Q 006979 458 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----------------IL----NLS 516 (623)
Q Consensus 458 ~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-----------------~~----~~~ 516 (623)
+...+.+.++.. ||.+|++++|.|++ .+++|+||+.||........ .+ ...
T Consensus 38 ~~~~~~v~i~~~-DG~~L~a~l~~P~~-------~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 109 (560)
T 3iii_A 38 MIMEKDGTVEMR-DGEKLYINIFRPNK-------DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPD 109 (560)
T ss_dssp EEEEEEEEEECT-TSCEEEEEEEECSS-------SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCC
T ss_pred eEEEEEEEEECC-CCcEEEEEEEecCC-------CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCC
Confidence 345678899998 99999999999986 57899999999764321100 11 123
Q ss_pred hHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCC
Q 006979 517 IQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFR 595 (623)
Q Consensus 517 ~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~ 595 (623)
+++|+++||+|+.+|+||+|+++..+. .++..+.+|+.++++||.+++++| +||+++|+||||++++.++ .+|
T Consensus 110 ~~~la~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p 183 (560)
T 3iii_A 110 PGFWVPNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNP 183 (560)
T ss_dssp HHHHGGGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCC
T ss_pred HHHHHhCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCC
Confidence 789999999999999999998877653 355678999999999999999888 8999999999999999988 678
Q ss_pred CceeEEEecccCCCHHH
Q 006979 596 DTFKAGASLYGVSIPVI 612 (623)
Q Consensus 596 ~~f~a~v~~~g~~d~~~ 612 (623)
+.++|+|+.+|++|+.+
T Consensus 184 ~~l~aiv~~~~~~d~~~ 200 (560)
T 3iii_A 184 PHLKAMIPWEGLNDMYR 200 (560)
T ss_dssp TTEEEEEEESCCCBHHH
T ss_pred CceEEEEecCCcccccc
Confidence 89999999999999864
No 29
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.67 E-value=7.8e-15 Score=147.81 Aligned_cols=258 Identities=9% Similarity=0.077 Sum_probs=179.5
Q ss_pred CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCC-------------C
Q 006979 99 HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD-------------Q 165 (623)
Q Consensus 99 ~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~-------------~ 165 (623)
++.|||..... ...|++++.+ |...++|.+.. ..-+.+.++.|+|++..+ .
T Consensus 25 g~~iy~~n~~d----~~~ly~~~~d-g~~~~~l~~~~-----------~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~ 88 (302)
T 3s25_A 25 DGEVFFSNTND----NGRLYAMNID-GSNIHKLSNDT-----------AMYINADKNYVYYVRNNNQKITSQTFFSYDRN 88 (302)
T ss_dssp TTEEEEEEGGG----TTEEEEEETT-SCSCEEEEEEE-----------EEEEEECSSEEEEEEECC------CCSSCCSE
T ss_pred CCEEEEEeCCC----CceEEEEcCC-CCCCEEccCCc-----------eeeEEEcCCEEEEEECCCCcccccceeccCCC
Confidence 99999987542 2359999876 33566666533 234566777999997654 3
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCc
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~ 245 (623)
.||+++++++ ..++|+.. .. ..++|+|++|+|+...... ...||++++++.. .++|+....
T Consensus 89 ~Iy~i~~dg~--~~~~l~~~----~~----~~~s~~g~~Iy~~~~~~~~-----~~~Iy~~~~dGs~---~~~lt~~~~- 149 (302)
T 3s25_A 89 SLCRIKRNGH--GSTVLDPD----PC----IYASLIGNYIYYLHYDTQT-----ATSLYRIRIDGEE---KKKIKNHYL- 149 (302)
T ss_dssp EEEEEETTSC--CCEEEECS----CE----EEEEEETTEEEEEEESSSS-----CEEEEEEETTSCC---CEEEESSCC-
T ss_pred eEEEEeCCCC--cceEeecC----Cc----cEEEEeCCEEEEEeecCCC-----CceEEEEECCCCC---eEEEeCCCc-
Confidence 6999999987 67788764 22 2688999999998621111 2789999999877 677776532
Q ss_pred ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCe
Q 006979 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGF 324 (623)
Q Consensus 246 ~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~ 324 (623)
+.++|||++|+|+... ..+|++++++++ ..+++..+ . . ..|.| |+|+ |||+... .+
T Consensus 150 ---~~~~~~g~~iy~t~~g-------~~~Iy~~~l~g~---~~~~l~~~-~----~--~~~~~-P~g~~iy~t~~~-~~- 206 (302)
T 3s25_A 150 ---FTCNTSDRYFYYNNPK-------NGQLYRYDTASQ---SEALFYDC-N----C--YKPVV-LDDTNVYYMDVN-RD- 206 (302)
T ss_dssp ---CCSEEETTEEEEECTT-------TCCEEEEETTTT---EEEEEECS-C----E--EEEEE-EETTEEEEEEGG-GT-
T ss_pred ---eEeeEECCEEEEEeCC-------CceEEEEECCCC---CEEEEeCC-C----c--cceee-ecCCEEEEEEcC-CC-
Confidence 4589999999999631 345999999876 23444332 2 2 23444 9988 7776543 33
Q ss_pred eeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcceE
Q 006979 325 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDID 404 (623)
Q Consensus 325 ~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~ 404 (623)
.+|++.+++++..+.|+.... +.|. ++++.|||+....+ .+|+++++++...++|.... +.
T Consensus 207 ~~I~~~~ldG~~~~~Lt~~~~----~~~~------------~~g~~Iy~~~~~~~-~~i~~~~~DG~~r~~l~~~~--~~ 267 (302)
T 3s25_A 207 NAIVHVNINNPNPVVLTEANI----EHYN------------VYGSLIFYQRGGDN-PALCVVKNDGTGFKELAKGE--FC 267 (302)
T ss_dssp TEEEEECSSSCCCEECSCSCE----EEEE------------EETTEEEEEECSSS-CEEEEEETTSCCCEEEEESC--EE
T ss_pred cEEEEEECCCCCeEEEeCCCc----ceEE------------ECCCEEEEEECCCC-cEEEEEECCCCccEEeeCCc--cc
Confidence 789999999988887874321 2222 27889998765444 89999999998888887653 33
Q ss_pred eeeecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 405 NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 405 ~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
.+...++++||+-... ..||++.+++...
T Consensus 268 ~i~i~~d~Iy~td~~~---~~i~~~~~dGs~~ 296 (302)
T 3s25_A 268 NINVTSQYVYFTDFVS---NKEYCTSTQNPDT 296 (302)
T ss_dssp EEEECSSEEEEEETTT---CCEEEEESSSCCS
T ss_pred eEEEeCCEEEEEECCC---CeEEEEECCCCCc
Confidence 5677899999986432 2499999877654
No 30
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.67 E-value=1.1e-16 Score=168.74 Aligned_cols=147 Identities=12% Similarity=0.004 Sum_probs=114.3
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcc------------cCcCC----HHhHHHHcC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA------------RGILN----LSIQYWTSR 523 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~------------~~~~~----~~~~~~a~~ 523 (623)
..+.+.+++. +|..++++++.|++. .++.|+||++||++.... ...|. ..++.|+++
T Consensus 91 ~~e~v~~~~~-~g~~l~~~l~~P~~~------~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~ 163 (398)
T 3nuz_A 91 RLEKWEFYPL-PKCVSTFLVLIPDNI------NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKE 163 (398)
T ss_dssp EEEEEEECCS-TTBCEEEEEEEESSC------CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTT
T ss_pred EEEEEEEEcC-CCcEEEEEEEeCCCC------CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHC
Confidence 4677889888 899999999999762 467899999999855322 01222 578999999
Q ss_pred ceEEEEECCCCCCCCchhHH-------------H---hhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHH
Q 006979 524 GWAFVDVNYGGSTGYGREFR-------------E---RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYT 587 (623)
Q Consensus 524 G~~v~~~d~rGs~~~g~~~~-------------~---~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~ 587 (623)
||+|+++|+||.|+.+.... . .....++...+.|+.++++||.+++.+|++||+|+|+|+||++
T Consensus 164 Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~ 243 (398)
T 3nuz_A 164 GYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEP 243 (398)
T ss_dssp TCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHH
Confidence 99999999999876543220 0 0112333345689999999999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecccCCCHHHh
Q 006979 588 TLAALAFRDTFKAGASLYGVSIPVII 613 (623)
Q Consensus 588 ~~~~~~~~~~f~a~v~~~g~~d~~~~ 613 (623)
++.++..+++++|+|+..+++.+...
T Consensus 244 a~~~aa~~~~i~a~v~~~~~~~~~~~ 269 (398)
T 3nuz_A 244 MMVLGTLDTSIYAFVYNDFLCQTQER 269 (398)
T ss_dssp HHHHHHHCTTCCEEEEESCBCCHHHH
T ss_pred HHHHHhcCCcEEEEEEecccccchhh
Confidence 99888666789999998887776654
No 31
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.66 E-value=2.8e-16 Score=155.56 Aligned_cols=127 Identities=15% Similarity=0.149 Sum_probs=85.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
||.+|++++|.|.+ ..+.|+||++||++.......+...++.|+++||+|+.+|+||+|.++...........
T Consensus 39 dG~~i~g~l~~P~~-------~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~ 111 (259)
T 4ao6_A 39 DGRTVPGVYWSPAE-------GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDV 111 (259)
T ss_dssp TTEEEEEEEEEESS-------SCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCG
T ss_pred CCeEEEEEEEeCCC-------CCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchh
Confidence 89999999999987 56789999999997665556677889999999999999999998876544322111111
Q ss_pred ---------------ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 551 ---------------GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 551 ---------------g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
....+.|..++++++... +|++||+++|+|+||++++.++ ..|+ ++|+|...+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~ 181 (259)
T 4ao6_A 112 VGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMG 181 (259)
T ss_dssp GGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCC
T ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccc
Confidence 112356788888888654 7889999999999999999998 5665 5666655443
No 32
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.66 E-value=1.4e-15 Score=159.20 Aligned_cols=244 Identities=10% Similarity=0.124 Sum_probs=157.5
Q ss_pred CCEEEEEeCCC--CcEEEEeCCCCCCCceecCCCCCCCCeeec-ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC
Q 006979 154 GDTVIFSNYKD--QRLYKHSIDSKDSSPLPITPDYGEPLVSYA-DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG 230 (623)
Q Consensus 154 ~d~l~f~~~~~--~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~-d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~ 230 (623)
+..|+|....+ .+||+++++++ ..++++.. ..... .+.|||||++|+|+..+ .+||++|+++
T Consensus 47 G~~l~~~~~~~g~~~l~~~d~~~~--~~~~l~~~----~~~~~~~~~~spdg~~l~~~~~~---------~~l~~~d~~~ 111 (396)
T 3c5m_A 47 GKKLLFAGDFDGNRNYYLLNLETQ--QAVQLTEG----KGDNTFGGFISTDERAFFYVKNE---------LNLMKVDLET 111 (396)
T ss_dssp SCEEEEEECTTSSCEEEEEETTTT--EEEECCCS----SCBCTTTCEECTTSSEEEEEETT---------TEEEEEETTT
T ss_pred CCEEEEEEecCCCceEEEEECCCC--cEEEeecC----CCCccccceECCCCCEEEEEEcC---------CcEEEEECCC
Confidence 34778876543 36999999887 67788764 22323 37899999999998753 3699999999
Q ss_pred CCcccceecccCC-Ccccc-------------------eeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE
Q 006979 231 QNIQEPKVLVSGS-DFYAF-------------------PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV 290 (623)
Q Consensus 231 g~~~~~~~l~~~~-~~~~~-------------------p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~ 290 (623)
++ .+.+.... .+... +.|||||++|++....... ....|+++|++++. ...
T Consensus 112 ~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~---~~~~l~~~d~~~g~---~~~ 182 (396)
T 3c5m_A 112 LE---EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN---PTCRLIKVDIETGE---LEV 182 (396)
T ss_dssp CC---EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC---CCEEEEEEETTTCC---EEE
T ss_pred CC---cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC---CcceEEEEECCCCc---EEe
Confidence 87 56665422 21111 4566777666654310111 35679999998763 223
Q ss_pred EEcCCCCCccccCcCceeCC-CCc-EEEEEeCCCCe----eeEEEEecCCCeEEEEeecc--cccccccccccCcceeEE
Q 006979 291 CVAGFDPTIVESPTEPKWSS-KGE-LFFVTDRKNGF----WNLHKWIESNNEVLAIYSLD--AEFSRPLWVFGINSYEII 362 (623)
Q Consensus 291 ~~~~~~~~~~~~~~~~~ws~-DG~-l~~~~~~~~g~----~~L~~~d~~~~~~~~l~~~~--~~~~~~~w~~~~~~~~~l 362 (623)
+. ... ..+..+.|+| ||+ ++|+++. +. .+|+.+|+++++.+.+.... ..+..+.|+
T Consensus 183 ~~-~~~----~~~~~~~~sp~dg~~l~~~~~~--~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s--------- 246 (396)
T 3c5m_A 183 IH-QDT----AWLGHPIYRPFDDSTVGFCHEG--PHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWI--------- 246 (396)
T ss_dssp EE-EES----SCEEEEEEETTEEEEEEEEECS--CSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEEC---------
T ss_pred ec-cCC----cccccceECCCCCCEEEEEecC--CCCCCCceEEEEECCCCceeEeeccCCCccccceEEC---------
Confidence 33 222 3456889999 788 8887753 22 58999999887777766421 122333444
Q ss_pred eecCCCCEEEEEEEECCeEE--EEEEeCCCCceeecccCCcceEeeee-cCCEEEEEEec------------CCCCCeEE
Q 006979 363 QSHGEKNLIACSYRQNGRSY--LGILDDFGHSLSLLDIPFTDIDNITL-GNDCLFVEGAS------------GVEPSSVA 427 (623)
Q Consensus 363 ~~s~~~~~l~~~~~~~g~~~--L~~~d~~~~~~~~lt~~~~~v~~~~~-~~~~~~~~~~s------------~~~~~~ly 427 (623)
|+++.|++.+.+.+... |+++|+++++.+.+.........+++ +++.+++.... ......||
T Consensus 247 ---pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 247 ---PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp ---TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred ---CCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 38888999888777645 99999999888776542221122366 77755553322 11236899
Q ss_pred EEEcCCCcceeee
Q 006979 428 KVTLDDHKLKAVD 440 (623)
Q Consensus 428 ~~~l~~~~~~~lt 440 (623)
++++++++.++|+
T Consensus 324 ~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 324 VLNTKAKSAQKLC 336 (396)
T ss_dssp EEETTTTBCCEEE
T ss_pred EEecccCceEEcc
Confidence 9999988876554
No 33
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.64 E-value=2.5e-16 Score=175.09 Aligned_cols=142 Identities=15% Similarity=0.200 Sum_probs=112.9
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCc----cc-CcCC-HHh---HHHHcCceEEEEE
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE----AR-GILN-LSI---QYWTSRGWAFVDV 530 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~----~~-~~~~-~~~---~~~a~~G~~v~~~ 530 (623)
..+.+.++.. ||..|+++++.|++ .+++|+||++||..... .. ..+. ... ++|+++||+|+.+
T Consensus 24 ~~~~v~i~~~-DG~~L~~~~~~P~~-------~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~ 95 (615)
T 1mpx_A 24 IKREVMIPMR-DGVKLHTVIVLPKG-------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQ 95 (615)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEETT-------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred EEEEEEEECC-CCCEEEEEEEeCCC-------CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEE
Confidence 4567888888 99999999999976 36789999999753221 01 0111 122 8999999999999
Q ss_pred CCCCCCCCchhHHHhh-----ccCCccchHHHHHHHHHHHHhC-CCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEe
Q 006979 531 NYGGSTGYGREFRERL-----LGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGAS 603 (623)
Q Consensus 531 d~rGs~~~g~~~~~~~-----~~~~g~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~ 603 (623)
|+||+++++..+.... ...++..+.+|+.++++||.++ ++.| .||+|+|+||||+++++++ .+++.|+|+|+
T Consensus 96 D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~ 174 (615)
T 1mpx_A 96 DVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVP 174 (615)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEE
T ss_pred CCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEe
Confidence 9999998887654321 1233448899999999999998 8887 5999999999999999998 67899999999
Q ss_pred cccCCCH
Q 006979 604 LYGVSIP 610 (623)
Q Consensus 604 ~~g~~d~ 610 (623)
.+|++|+
T Consensus 175 ~~~~~d~ 181 (615)
T 1mpx_A 175 ESPMIDG 181 (615)
T ss_dssp ESCCCCT
T ss_pred cCCcccc
Confidence 9999995
No 34
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.64 E-value=3.1e-16 Score=175.06 Aligned_cols=143 Identities=18% Similarity=0.218 Sum_probs=113.7
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcc-cCcC--------CHHh-HHHHcCceEEEE
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGIL--------NLSI-QYWTSRGWAFVD 529 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~-~~~~--------~~~~-~~~a~~G~~v~~ 529 (623)
..+.+.++.. ||..|++++|.|++ .+++|+||++||...... ...+ .... ++|+++||+|+.
T Consensus 36 ~~~~v~i~~~-DG~~L~~~l~~P~~-------~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~ 107 (652)
T 2b9v_A 36 IKREVMVPMR-DGVKLYTVIVIPKN-------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVF 107 (652)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEETT-------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEE
T ss_pred EEEEEEEECC-CCcEEEEEEEecCC-------CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEE
Confidence 3467888888 99999999999976 357899999996532110 0011 1123 899999999999
Q ss_pred ECCCCCCCCchhHHHhh--ccCC---ccchHHHHHHHHHHHHhC-CCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEE
Q 006979 530 VNYGGSTGYGREFRERL--LGRW---GIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGA 602 (623)
Q Consensus 530 ~d~rGs~~~g~~~~~~~--~~~~---g~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v 602 (623)
+|+||+++++..+.... .+++ +..+.+|+.++++||.++ +++| .||+|+|+||||+++++++ .+++.|+|+|
T Consensus 108 ~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v 186 (652)
T 2b9v_A 108 QDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAA 186 (652)
T ss_dssp EECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEE
T ss_pred EecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEE
Confidence 99999999888764321 1223 357899999999999999 8888 5999999999999999998 6889999999
Q ss_pred ecccCCCHH
Q 006979 603 SLYGVSIPV 611 (623)
Q Consensus 603 ~~~g~~d~~ 611 (623)
+.+|++|+.
T Consensus 187 ~~~~~~d~~ 195 (652)
T 2b9v_A 187 PESPMVDGW 195 (652)
T ss_dssp EEEECCCTT
T ss_pred ecccccccc
Confidence 999999974
No 35
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.63 E-value=6.3e-16 Score=162.63 Aligned_cols=146 Identities=13% Similarity=0.025 Sum_probs=112.8
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc------------CcCC----HHhHHHHcC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR------------GILN----LSIQYWTSR 523 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~------------~~~~----~~~~~~a~~ 523 (623)
..+.+.+++. +|..++++++.|.+. .++.|+||++||....... ..+. ..++.|+++
T Consensus 86 ~~e~v~~~~~-~g~~l~~~l~~P~~~------~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~ 158 (391)
T 3g8y_A 86 ILEKWEFYPF-PKSVSTFLVLKPEHL------KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKE 158 (391)
T ss_dssp EEEEEEECCS-TTCCEEEEEEEETTC------CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTT
T ss_pred EEEEEEEEcC-CCCEEEEEEEeCCCC------CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHC
Confidence 4577888887 899999999999762 4578999999997543210 1122 578899999
Q ss_pred ceEEEEECCCCCCCCchh----------HHHh------hccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHH
Q 006979 524 GWAFVDVNYGGSTGYGRE----------FRER------LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYT 587 (623)
Q Consensus 524 G~~v~~~d~rGs~~~g~~----------~~~~------~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~ 587 (623)
||+|+++|+||.|+.+.. +... ....++...+.|+.++++||.+++.+|++||+|+|+|+||++
T Consensus 159 G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~ 238 (391)
T 3g8y_A 159 GYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEP 238 (391)
T ss_dssp TCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHH
Confidence 999999999998765532 1110 011222334589999999999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecccCCCHHH
Q 006979 588 TLAALAFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 588 ~~~~~~~~~~f~a~v~~~g~~d~~~ 612 (623)
++.++..+++++++|+..+++++..
T Consensus 239 al~~a~~~~~i~a~v~~~~~~~~~~ 263 (391)
T 3g8y_A 239 MMVLGVLDKDIYAFVYNDFLCQTQE 263 (391)
T ss_dssp HHHHHHHCTTCCEEEEESCBCCHHH
T ss_pred HHHHHHcCCceeEEEEccCCCCccc
Confidence 9998876778999999999988854
No 36
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.61 E-value=8.3e-15 Score=162.41 Aligned_cols=247 Identities=13% Similarity=0.025 Sum_probs=157.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcEEE
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l~~ 169 (623)
....+.|||+ ++.+............||..+....+....++... ..+ ..++.++++.++|+....+.+++
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~-~~~-------~~~~s~dg~~~~~~s~~~~~~~l 136 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PMR-------ILSGVDTGEAVVFTGATEDRVAL 136 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSC-SBE-------EEEEEECSSCEEEEEECSSCEEE
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccCCC-Cce-------eeeeCCCCCeEEEEecCCCCceE
Confidence 3456788876 55555443122345668877661113444444332 111 23566677777777656666778
Q ss_pred EeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccce
Q 006979 170 HSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFP 249 (623)
Q Consensus 170 ~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p 249 (623)
+|++++ ..++++.. .. .++.|||||++|++...+... ...||++|+++++ .++|+........|
T Consensus 137 ~d~~~g--~~~~l~~~----~~--~~~~~spDG~~la~~~~~~~~-----~~~i~~~d~~~g~---~~~l~~~~~~~~~~ 200 (582)
T 3o4h_A 137 YALDGG--GLRELARL----PG--FGFVSDIRGDLIAGLGFFGGG-----RVSLFTSNLSSGG---LRVFDSGEGSFSSA 200 (582)
T ss_dssp EEEETT--EEEEEEEE----SS--CEEEEEEETTEEEEEEEEETT-----EEEEEEEETTTCC---CEEECCSSCEEEEE
T ss_pred EEccCC--cEEEeecC----CC--ceEEECCCCCEEEEEEEcCCC-----CeEEEEEcCCCCC---ceEeecCCCccccc
Confidence 899887 67777753 22 678999999999988776432 2569999999998 77887776667889
Q ss_pred eeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce--------eCCCCcEEEEEeCC
Q 006979 250 RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK--------WSSKGELFFVTDRK 321 (623)
Q Consensus 250 ~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------ws~DG~l~~~~~~~ 321 (623)
+|||||++|+ .. +.. ....||++|++++. .. ++.+.+ ..+..+. |+|||++++....
T Consensus 201 ~~SpDG~~l~-~~-~~~----~~~~i~~~d~~~~~---~~-~~~~~~----~~~~~~~~~~~~~~~~spdg~~~~~~~~- 265 (582)
T 3o4h_A 201 SISPGMKVTA-GL-ETA----REARLVTVDPRDGS---VE-DLELPS----KDFSSYRPTAITWLGYLPDGRLAVVARR- 265 (582)
T ss_dssp EECTTSCEEE-EE-ECS----SCEEEEEECTTTCC---EE-ECCCSC----SHHHHHCCSEEEEEEECTTSCEEEEEEE-
T ss_pred eECCCCCEEE-Ec-cCC----CeeEEEEEcCCCCc---EE-EccCCC----cChhhhhhccccceeEcCCCcEEEEEEc-
Confidence 9999999998 33 332 23579999998773 23 444443 3445566 9999987777766
Q ss_pred CCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeec
Q 006979 322 NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 396 (623)
Q Consensus 322 ~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~l 396 (623)
++..+||.+ ++... +.. ..+. .+.+. +++.++..+.......||++|.++ +.++|
T Consensus 266 ~g~~~l~~~----g~~~~-~~~-~~v~---------~~~~s----dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 266 EGRSAVFID----GERVE-APQ-GNHG---------RVVLW----RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp TTEEEEEET----TEEEC-CCS-SEEE---------EEEEE----TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred CCcEEEEEE----CCeec-cCC-CceE---------EEEec----CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 677777765 44332 111 1111 22332 555554444445567899999876 66666
No 37
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.61 E-value=1.2e-13 Score=156.58 Aligned_cols=260 Identities=10% Similarity=-0.002 Sum_probs=168.2
Q ss_pred EEEeCCEEEEEeCCC----CcEEEEeCCCCCCCceecCCCC---CCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 006979 150 FRIFGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 150 ~~~s~d~l~f~~~~~----~~l~~~d~~~g~~~~~~Lt~~~---~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~ 222 (623)
..+.++.++|..... ..||+.+..++ ..++|+... +........++|||||++|+|.....+. ....
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~----~~~~ 148 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESG--QEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA----DEAV 148 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTS--CCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC----SCCE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCC--CcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC----ceEE
Confidence 345677888886544 34899998766 677776531 0112356789999999999998775432 1268
Q ss_pred EEEEEcCCCCcccce---ecccCCCcccceeeCCCCCEEEEEEecCCCC-----CCCceEEEEEEecCCCceeeeEEEcC
Q 006979 223 IVAIALNGQNIQEPK---VLVSGSDFYAFPRMDPRGERMAWIEWHHPNM-----PWDKAELWVGYISENGDVYKRVCVAG 294 (623)
Q Consensus 223 L~~idl~~g~~~~~~---~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~-----p~~~~~L~v~d~~~~~~~~~~~~~~~ 294 (623)
|+++|+++|+ .. .+. +.. ...++|||||+.|+|.+.+.++. .+...+||+.++.++.. ....+...
T Consensus 149 i~v~dl~tg~---~~~~~~~~-~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~-~~~lv~~~ 222 (695)
T 2bkl_A 149 LHVIDVDSGE---WSKVDVIE-GGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS-KDTVVHER 222 (695)
T ss_dssp EEEEETTTCC---BCSSCCBS-CCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG-GCEEEECC
T ss_pred EEEEECCCCC---CcCCcccC-ccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch-hceEEEec
Confidence 9999999987 32 121 111 25789999999999998765310 01245799999987632 11233333
Q ss_pred CCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEE
Q 006979 295 FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 373 (623)
Q Consensus 295 ~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~ 373 (623)
.+.. .....+.|||||+ |++.+....+..+||.++..+++.+.|+........+.| + +++ +|+
T Consensus 223 ~~~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------~---~g~-l~~ 286 (695)
T 2bkl_A 223 TGDP--TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA----------W---KDR-FYV 286 (695)
T ss_dssp CCCT--TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE----------E---TTE-EEE
T ss_pred CCCC--EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe----------c---CCc-EEE
Confidence 2211 2445789999999 877776622677899998777777888754322222222 1 777 888
Q ss_pred EEEEC-CeEEEEEEeCCCCc---eeecccC--CcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCccee
Q 006979 374 SYRQN-GRSYLGILDDFGHS---LSLLDIP--FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKA 438 (623)
Q Consensus 374 ~~~~~-g~~~L~~~d~~~~~---~~~lt~~--~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~ 438 (623)
.++.+ +..+|+++|+++++ ++.|..+ ...+..+...++.+++..... ...+|+.++++++..+.
T Consensus 287 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~d-g~~~l~~~~~~g~~~~~ 356 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKD-ATSEVRVATLKGKPVRT 356 (695)
T ss_dssp EECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEET-TEEEEEEEETTCCEEEE
T ss_pred EECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEEC-CEEEEEEEeCCCCeeEE
Confidence 77644 46789999998776 3555543 333555544477777776543 34579999987654433
No 38
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.61 E-value=8.2e-14 Score=140.31 Aligned_cols=238 Identities=13% Similarity=0.166 Sum_probs=167.7
Q ss_pred CceEEEeCCEEEEEeCC-CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCC-CC----Cce
Q 006979 147 GGAFRIFGDTVIFSNYK-DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-AL----NST 220 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~-~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~-~~----~~~ 220 (623)
++-++.+++.|+|++.. .+.||+++.++. .+++|+.. . . --++++|++|+|+....... .. ...
T Consensus 18 ~g~~~~~g~~iy~~n~~d~~~ly~~~~dg~--~~~~l~~~----~--~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~ 87 (302)
T 3s25_A 18 AGLFCESDGEVFFSNTNDNGRLYAMNIDGS--NIHKLSND----T--A--MYINADKNYVYYVRNNNQKITSQTFFSYDR 87 (302)
T ss_dssp TTCEEEETTEEEEEEGGGTTEEEEEETTSC--SCEEEEEE----E--E--EEEEECSSEEEEEEECC------CCSSCCS
T ss_pred ceEEEEeCCEEEEEeCCCCceEEEEcCCCC--CCEEccCC----c--e--eeEEEcCCEEEEEECCCCcccccceeccCC
Confidence 45577788899999754 457999999876 78888864 1 1 23689999999987653210 00 124
Q ss_pred eEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 221 ~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
..||++++++++ .++|..... ..|+|+|++|+|....+. ....||++++++. ..+.+....
T Consensus 88 ~~Iy~i~~dg~~---~~~l~~~~~----~~~s~~g~~Iy~~~~~~~----~~~~Iy~~~~dGs----~~~~lt~~~---- 148 (302)
T 3s25_A 88 NSLCRIKRNGHG---STVLDPDPC----IYASLIGNYIYYLHYDTQ----TATSLYRIRIDGE----EKKKIKNHY---- 148 (302)
T ss_dssp EEEEEEETTSCC---CEEEECSCE----EEEEEETTEEEEEEESSS----SCEEEEEEETTSC----CCEEEESSC----
T ss_pred CeEEEEeCCCCc---ceEeecCCc----cEEEEeCCEEEEEeecCC----CCceEEEEECCCC----CeEEEeCCC----
Confidence 789999999987 667765432 368999999999973222 3678999999876 233444333
Q ss_pred ccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 301 ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 301 ~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
. +.++++|+ |||..+ +..+|++++++++..+.|..+.. ..+ +. |+++.|||+...++
T Consensus 149 ~----~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~~~~l~~~~~--~~~----------~~---P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 149 L----FTCNTSDRYFYYNNP---KNGQLYRYDTASQSEALFYDCNC--YKP----------VV---LDDTNVYYMDVNRD 206 (302)
T ss_dssp C----CCSEEETTEEEEECT---TTCCEEEEETTTTEEEEEECSCE--EEE----------EE---EETTEEEEEEGGGT
T ss_pred c----eEeeEECCEEEEEeC---CCceEEEEECCCCCEEEEeCCCc--cce----------ee---ecCCEEEEEEcCCC
Confidence 1 34577888 888754 56689999998888777754211 111 11 28899999876555
Q ss_pred eEEEEEEeCCCCceeecccCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcceeee
Q 006979 380 RSYLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 440 (623)
Q Consensus 380 ~~~L~~~d~~~~~~~~lt~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt 440 (623)
.+|++++++++..+.|+... +..+++.+++||+..... ...|+++++++...++|.
T Consensus 207 -~~I~~~~ldG~~~~~Lt~~~--~~~~~~~g~~Iy~~~~~~--~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 207 -NAIVHVNINNPNPVVLTEAN--IEHYNVYGSLIFYQRGGD--NPALCVVKNDGTGFKELA 262 (302)
T ss_dssp -TEEEEECSSSCCCEECSCSC--EEEEEEETTEEEEEECSS--SCEEEEEETTSCCCEEEE
T ss_pred -cEEEEEECCCCCeEEEeCCC--cceEEECCCEEEEEECCC--CcEEEEEECCCCccEEee
Confidence 79999999999988887542 334688999998875432 278999999998766554
No 39
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.61 E-value=5.3e-14 Score=144.73 Aligned_cols=206 Identities=13% Similarity=0.164 Sum_probs=141.2
Q ss_pred eeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCC
Q 006979 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW 270 (623)
Q Consensus 191 ~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~ 270 (623)
.++.++.+ ||++|+|+..............||++|+++++ .++| .....|.|||||++|+|+..+...
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~---~~~l----~~~~~~~~SpDg~~la~~~~~~~~--- 82 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA---RRFI----ENATMPRISPDGKKIAFMRANEEK--- 82 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC---EEEE----ESCEEEEECTTSSEEEEEEEETTT---
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc---eEEc----ccCCCeEECCCCCEEEEEEeccCC---
Confidence 34567888 99999998764322112245889999999987 6666 335679999999999999865421
Q ss_pred CceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCC-----------------------CCeee
Q 006979 271 DKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRK-----------------------NGFWN 326 (623)
Q Consensus 271 ~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~-----------------------~g~~~ 326 (623)
...+||+++++++ ..+.+.... . +..+.|+|||+ |+|.+... .+..+
T Consensus 83 ~~~~l~~~~~~~g----~~~~l~~~~----~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 153 (347)
T 2gop_A 83 KVSEIWVADLETL----SSKKILEAK----N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTT 153 (347)
T ss_dssp TEEEEEEEETTTT----EEEEEEEES----E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEE
T ss_pred CcceEEEEECCCC----ceEEEEcCC----C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccce
Confidence 2567999999876 223333323 3 66899999999 88876420 11468
Q ss_pred EEEEecCCCeE-EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC------C-eEEEEEEeCCCCceeeccc
Q 006979 327 LHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN------G-RSYLGILDDFGHSLSLLDI 398 (623)
Q Consensus 327 L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~------g-~~~L~~~d~~~~~~~~lt~ 398 (623)
|+++|+.+++. +.++. . .+..+.|++ ++ ++++...+ . ..+||.+| +++.++|+.
T Consensus 154 l~~~d~~~~~~~~~l~~-~-~~~~~~~sp------------dg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 154 FWIFDTESEEVIEEFEK-P-RFSSGIWHR------------DK--IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp EEEEETTTTEEEEEEEE-E-TTCEEEEET------------TE--EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred EEEEECCCCeEEeeecC-C-CcccccCCC------------Ce--EEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 99999999887 77765 3 445555553 65 66666543 2 67899999 677777776
Q ss_pred CCcceEeeeecCCEEEEEEecCC----CCCeEEEEEcCCCccee
Q 006979 399 PFTDIDNITLGNDCLFVEGASGV----EPSSVAKVTLDDHKLKA 438 (623)
Q Consensus 399 ~~~~v~~~~~~~~~~~~~~~s~~----~~~~ly~~~l~~~~~~~ 438 (623)
. ..+..++++++++++...... ...+||.++ +++.+.
T Consensus 216 ~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 256 (347)
T 2gop_A 216 K-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG 256 (347)
T ss_dssp E-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE
T ss_pred C-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEe
Confidence 5 444444888998888875432 346899998 555433
No 40
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.60 E-value=2.9e-15 Score=157.33 Aligned_cols=137 Identities=17% Similarity=0.085 Sum_probs=108.4
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY 538 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~ 538 (623)
...+.+.++. +|..|+++++.|++ .++.|+||++||+... ...+....+.|+++||+|+.+|+||.|.+
T Consensus 125 ~~~~~v~~~~--dg~~i~~~l~~p~~-------~~~~P~vl~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~rG~G~s 193 (386)
T 2jbw_A 125 PPAERHELVV--DGIPMPVYVRIPEG-------PGPHPAVIMLGGLEST--KEESFQMENLVLDRGMATATFDGPGQGEM 193 (386)
T ss_dssp SCEEEEEEEE--TTEEEEEEEECCSS-------SCCEEEEEEECCSSCC--TTTTHHHHHHHHHTTCEEEEECCTTSGGG
T ss_pred CCeEEEEEEe--CCEEEEEEEEcCCC-------CCCCCEEEEeCCCCcc--HHHHHHHHHHHHhCCCEEEEECCCCCCCC
Confidence 4678888887 69999999999986 4667999999988432 22334458889999999999999996543
Q ss_pred chhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCCCHHHh
Q 006979 539 GREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVSIPVII 613 (623)
Q Consensus 539 g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~d~~~~ 613 (623)
. ..........+|+.+++++|.+++.+|++||+|+|+|+||++++.++.++++|+++|+. |+.|+...
T Consensus 194 ---~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~a~v~~-~~~~~~~~ 261 (386)
T 2jbw_A 194 ---F---EYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISW-GGFSDLDY 261 (386)
T ss_dssp ---T---TTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEE-SCCSCSTT
T ss_pred ---C---CCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcCCcceeEEEEe-ccCChHHH
Confidence 0 11112223346789999999999999999999999999999999999448899999999 99887543
No 41
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=2.7e-13 Score=153.94 Aligned_cols=258 Identities=9% Similarity=-0.002 Sum_probs=164.1
Q ss_pred EeCCEEEEEeCCC----CcEEEEeCCCCCCCceecCCCC---CCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 152 IFGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 152 ~s~d~l~f~~~~~----~~l~~~d~~~g~~~~~~Lt~~~---~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
+.++.++|..... +.||+++..++ ..+.|.+.. .........++|||||++|+|...+.+. ...+|+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~----~~~~i~ 154 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEG--EARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS----DWVTIK 154 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTS--CCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC----SCEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCC--CcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC----ceEEEE
Confidence 5666888876443 25899988766 555443320 0112356789999999999998775432 125899
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCC--------CCCceEEEEEEecCCCceeeeEEEcCCC
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM--------PWDKAELWVGYISENGDVYKRVCVAGFD 296 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~--------p~~~~~L~v~d~~~~~~~~~~~~~~~~~ 296 (623)
++|+++|+ ...++........+.|||||++|+|.+.+.+.. .+...+||+.++.++.. ....+..+.+
T Consensus 155 v~d~~tg~---~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~-~~~~v~~~~~ 230 (710)
T 2xdw_A 155 FMKVDGAK---ELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS-EDILCAEFPD 230 (710)
T ss_dssp EEETTTTE---EEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG-GCEEEECCTT
T ss_pred EEECCCCC---CCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc-cceEEeccCC
Confidence 99999987 444322221245689999999999998665410 12345799999976631 1123333322
Q ss_pred CCccccCcCceeCCCCc-EEEEEeCCCC-eeeEEEEecCC------C--eEEEEeecccccccccccccCcceeEEeecC
Q 006979 297 PTIVESPTEPKWSSKGE-LFFVTDRKNG-FWNLHKWIESN------N--EVLAIYSLDAEFSRPLWVFGINSYEIIQSHG 366 (623)
Q Consensus 297 ~~~~~~~~~~~ws~DG~-l~~~~~~~~g-~~~L~~~d~~~------~--~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~ 366 (623)
.. .....+.|||||+ |++.+.+..+ ...||.+|+++ + +.+.|+....... ..+. +
T Consensus 231 ~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~s---~ 295 (710)
T 2xdw_A 231 EP--KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY----------DYVT---N 295 (710)
T ss_dssp CT--TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE----------EEEE---E
T ss_pred CC--eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE----------EEEe---c
Confidence 01 2345789999999 7777765222 56899999876 5 4666664321111 1122 2
Q ss_pred CCCEEEEEEEECC-eEEEEEEeCCCCc---eeecccCCc--ceEee-eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 367 EKNLIACSYRQNG-RSYLGILDDFGHS---LSLLDIPFT--DIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 367 ~~~~l~~~~~~~g-~~~L~~~d~~~~~---~~~lt~~~~--~v~~~-~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
+++.|++.++.++ ..+|+++|++++. ++.|..+.. .+..+ ..+++.+++..... ...+|+++++.+|+
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~-g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD-VKNTLQLHDLATGA 370 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET-TEEEEEEEETTTCC
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC-CEEEEEEEECCCCC
Confidence 8899999887654 6789999998764 466655433 35555 33577887776543 33579999986554
No 42
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.58 E-value=4.9e-15 Score=152.34 Aligned_cols=144 Identities=19% Similarity=0.127 Sum_probs=109.4
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY 538 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~ 538 (623)
...+.+.+++. +|..++++++.|++. +++.|+||++||++... .+......|+++||+|+.+|+||.+++
T Consensus 66 ~~~~~~~~~~~-dg~~i~~~~~~P~~~------~~~~p~vv~~HG~g~~~---~~~~~~~~l~~~G~~v~~~d~rG~g~s 135 (337)
T 1vlq_A 66 VEAYDVTFSGY-RGQRIKGWLLVPKLE------EEKLPCVVQYIGYNGGR---GFPHDWLFWPSMGYICFVMDTRGQGSG 135 (337)
T ss_dssp EEEEEEEEECG-GGCEEEEEEEEECCS------CSSEEEEEECCCTTCCC---CCGGGGCHHHHTTCEEEEECCTTCCCS
T ss_pred eEEEEEEEEcC-CCCEEEEEEEecCCC------CCCccEEEEEcCCCCCC---CCchhhcchhhCCCEEEEecCCCCCCc
Confidence 36788999987 899999999999761 35679999999986442 333456678899999999999998855
Q ss_pred chhHHHhh------ccCCc---------------cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC
Q 006979 539 GREFRERL------LGRWG---------------IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD 596 (623)
Q Consensus 539 g~~~~~~~------~~~~g---------------~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~ 596 (623)
+..-.... ...++ ...++|+.++++++.+++.+|++||+|+|+|+||++++.++ .+|
T Consensus 136 ~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p- 214 (337)
T 1vlq_A 136 WLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK- 214 (337)
T ss_dssp SSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-
T ss_pred ccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-
Confidence 43100000 00000 14578999999999999889999999999999999999998 677
Q ss_pred ceeEEEecccC-CCHHHh
Q 006979 597 TFKAGASLYGV-SIPVII 613 (623)
Q Consensus 597 ~f~a~v~~~g~-~d~~~~ 613 (623)
.++++|+.+|. .++..+
T Consensus 215 ~v~~~vl~~p~~~~~~~~ 232 (337)
T 1vlq_A 215 KAKALLCDVPFLCHFRRA 232 (337)
T ss_dssp SCCEEEEESCCSCCHHHH
T ss_pred CccEEEECCCcccCHHHH
Confidence 58899988884 555443
No 43
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.56 E-value=2.9e-15 Score=165.36 Aligned_cols=138 Identities=17% Similarity=0.128 Sum_probs=111.7
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc-CcCCHHh-HHHHcCceEEEEECCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNLSI-QYWTSRGWAFVDVNYGGST 536 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~-~~~~~~~-~~~a~~G~~v~~~d~rGs~ 536 (623)
...+.+.++.. ||..|++.+|.|++ .++.|+||+.||....... ..|...+ ++|+++||+|+.+|+||+|
T Consensus 7 ~~~~~v~i~~~-DG~~L~~~~~~P~~-------~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G 78 (587)
T 3i2k_A 7 SVASNVMVPMR-DGVRLAVDLYRPDA-------DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLF 78 (587)
T ss_dssp EEEEEEEEECT-TSCEEEEEEEEECC-------SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTST
T ss_pred EEEEEEEEECC-CCCEEEEEEEECCC-------CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCC
Confidence 34567889998 99999999999976 4678999999875322111 1222234 8999999999999999999
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC-CCHH
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV-SIPV 611 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~-~d~~ 611 (623)
+++..+.. + ..+.+|+.++++||.++++.+ .||+++|+||||++++.++ .+++.++|+|+.++. .|+.
T Consensus 79 ~S~g~~~~-----~-~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 79 ASEGEFVP-----H-VDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 148 (587)
T ss_dssp TCCSCCCT-----T-TTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred CCCCcccc-----c-cchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccc
Confidence 88765432 2 357899999999999998876 8999999999999999998 678899999999999 8764
No 44
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.56 E-value=1.3e-14 Score=151.95 Aligned_cols=150 Identities=19% Similarity=0.187 Sum_probs=116.6
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc--------CC--HHhHHHHcCceEEEE
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI--------LN--LSIQYWTSRGWAFVD 529 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~--------~~--~~~~~~a~~G~~v~~ 529 (623)
..+.+.+.+..+|..+++++|.|++ +++ ++++|+||++||++....... +. ....+...+|+.|+.
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~--~~~--~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~ 218 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKD--VNP--DRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLA 218 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSS--CCT--TSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCC--CCC--CCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEE
Confidence 3456677663268899999999987 333 677899999999964432211 11 112334567899999
Q ss_pred ECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 530 VNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 530 ~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+|+||.++++..|........+..+.+|+.++++++.++..+|++||+|+|+|+||++++.++ .+|++|+++|+.+|..
T Consensus 219 pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~ 298 (380)
T 3doh_A 219 PQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGG 298 (380)
T ss_dssp ECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred ecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCC
Confidence 999999988887765444445567789999999999988779999999999999999999888 8999999999999998
Q ss_pred CHHHh
Q 006979 609 IPVII 613 (623)
Q Consensus 609 d~~~~ 613 (623)
+...+
T Consensus 299 ~~~~~ 303 (380)
T 3doh_A 299 DVSKV 303 (380)
T ss_dssp CGGGG
T ss_pred Chhhh
Confidence 76544
No 45
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.56 E-value=1.2e-14 Score=139.10 Aligned_cols=138 Identities=14% Similarity=0.079 Sum_probs=107.4
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.++. +|.++.++++.|.+ +.|+||++||++.......+...++.|+++||.|+.+|+||. |
T Consensus 11 ~~~~~~~~~--~g~~l~~~~~~p~~---------~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~---g 76 (223)
T 2o2g_A 11 QEYAVSVSV--GEVKLKGNLVIPNG---------ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQ---E 76 (223)
T ss_dssp CEEEEEEEE--TTEEEEEEEECCTT---------CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCH---H
T ss_pred eeeEEEEec--CCeEEEEEEecCCC---------CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCc---C
Confidence 456788876 68999999999854 468999999985444332344678889999999999999984 3
Q ss_pred hhHHHhhcc--CCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 540 REFRERLLG--RWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 540 ~~~~~~~~~--~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
......... ... ....+|+.++++++..++.+|+++|+++|+|+||++++.++ .+|+.++++|+.+|..++.
T Consensus 77 ~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 152 (223)
T 2o2g_A 77 EEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA 152 (223)
T ss_dssp HHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC
T ss_pred CCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC
Confidence 332221110 011 22368899999999999889999999999999999999988 8899999999999987754
No 46
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.56 E-value=1.8e-14 Score=136.95 Aligned_cols=136 Identities=14% Similarity=0.090 Sum_probs=106.7
Q ss_pred CCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCC---CcccCcCCHHhHHHHcCceEEEEECCCC
Q 006979 458 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPT---SEARGILNLSIQYWTSRGWAFVDVNYGG 534 (623)
Q Consensus 458 ~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~---~~~~~~~~~~~~~~a~~G~~v~~~d~rG 534 (623)
....+.+.+++. +| .++++++.|.+ .++.|+||++||++. ......+...+..|+++||.|+.+|+||
T Consensus 3 ~~~~~~~~~~~~-~g-~l~~~~~~p~~-------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 73 (208)
T 3trd_A 3 VMTNEDFLIQGP-VG-QLEVMITRPKG-------IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRG 73 (208)
T ss_dssp CCSSSCEEEECS-SS-EEEEEEECCSS-------CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred ccccceEEEECC-Cc-eEEEEEEcCCC-------CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCC
Confidence 345678889887 88 99999999975 456799999999642 2222234567888999999999999999
Q ss_pred CCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCCCHH
Q 006979 535 STGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 535 s~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~d~~ 611 (623)
.|.....+ .......+|+.++++++.++ .+.++|+++|+|+||.+++.++.+| .++++|..+|..+..
T Consensus 74 ~g~s~~~~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~-~v~~~v~~~~~~~~~ 141 (208)
T 3trd_A 74 VGKSQGRY------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVAYDQ-KVAQLISVAPPVFYE 141 (208)
T ss_dssp STTCCSCC------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHHHHS-CCSEEEEESCCTTSG
T ss_pred CCCCCCCc------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHhccC-CccEEEEeccccccC
Confidence 77654331 22344589999999999987 4458999999999999999999666 899999999987543
No 47
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.56 E-value=2e-14 Score=147.20 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=103.7
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCc-ccCcCCHHhHHHHc-CceEEEEECCCCCCCC
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWTS-RGWAFVDVNYGGSTGY 538 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~-~~~~~~~~~~~~a~-~G~~v~~~d~rGs~~~ 538 (623)
.+.+++++. +| .+.+++|.|.+ . ..|+||++|||++.. ....+......|++ +||+|+.+|||+++++
T Consensus 63 ~~~~~~~~~-~g-~i~~~~~~p~~-------~-~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~ 132 (326)
T 3ga7_A 63 TRTCAVPTP-YG-DVTTRLYSPQP-------T-SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQA 132 (326)
T ss_dssp EEEEEECCT-TS-CEEEEEEESSS-------S-CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTS
T ss_pred eEEEEeecC-CC-CeEEEEEeCCC-------C-CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCC
Confidence 378899887 77 89999999975 2 239999999996332 33455567788888 8999999999987654
Q ss_pred chhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCCc------eeEEEecccCC
Q 006979 539 GREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRDT------FKAGASLYGVS 608 (623)
Q Consensus 539 g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~~------f~a~v~~~g~~ 608 (623)
.. ...++|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++. ++++|..+|+.
T Consensus 133 ~~-----------~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~ 201 (326)
T 3ga7_A 133 RY-----------PQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLY 201 (326)
T ss_dssp CT-----------THHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCC
T ss_pred CC-----------CcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEecccc
Confidence 21 234689999999999864 47999999999999999999888 55553 99999999987
Q ss_pred CHH
Q 006979 609 IPV 611 (623)
Q Consensus 609 d~~ 611 (623)
++.
T Consensus 202 ~~~ 204 (326)
T 3ga7_A 202 GLQ 204 (326)
T ss_dssp SCS
T ss_pred ccC
Confidence 653
No 48
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.55 E-value=3.7e-12 Score=130.73 Aligned_cols=282 Identities=13% Similarity=0.043 Sum_probs=162.8
Q ss_pred CccCceEEcC-CCcEEEEeecCCC-CCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTE-AGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKD 164 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e-~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~ 164 (623)
..+.++.++| ++.+|.......+ .....++.++..++ +....++.. .......++++ .+++....+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~---------~~~~~~~~s~dg~~l~v~~~~~ 110 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL-EVTQAIHND---------LKPFGATINNTTQTLWFGNTVN 110 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC-CEEEEEEES---------SCCCSEEEETTTTEEEEEETTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-eEEEEEecC---------CCcceEEECCCCCEEEEEecCC
Confidence 4566889999 7777766533110 01334666766533 332222211 01233455554 688887777
Q ss_pred CcEEEEeCCCCCCCceecCCCCCC-----CCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceec
Q 006979 165 QRLYKHSIDSKDSSPLPITPDYGE-----PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL 239 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~~Lt~~~~~-----~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l 239 (623)
+.|+++|++++ .....+...... ......+..|+|||+++++..... ...|+++|+++++. ...+
T Consensus 111 ~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~--~~~~ 180 (353)
T 3vgz_A 111 SAVTAIDAKTG-EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKL--KTAI 180 (353)
T ss_dssp TEEEEEETTTC-CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEE--EEEE
T ss_pred CEEEEEeCCCC-eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCce--EEEe
Confidence 88999999877 222333332000 011235578999999887765321 16799999998862 2333
Q ss_pred ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEe
Q 006979 240 VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 319 (623)
Q Consensus 240 ~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~ 319 (623)
...........|||||++|++... ...|+++|+.++. ....+..........+..+.|+|||+.+|+++
T Consensus 181 ~~~~~~~~~~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 181 QNTGKMSTGLALDSEGKRLYTTNA--------DGELITIDTADNK---ILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp CCCCTTCCCCEEETTTTEEEEECT--------TSEEEEEETTTTE---EEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred cCCCCccceEEECCCCCEEEEEcC--------CCeEEEEECCCCe---EEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 313333556789999998877642 2358899988763 22222221100003345679999999556665
Q ss_pred CCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-eccc
Q 006979 320 RKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDI 398 (623)
Q Consensus 320 ~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~ 398 (623)
. +...|+.+|+.+++......... + ..+.+. ++++.+|++...+ ..|+++|..+++.. .+..
T Consensus 250 ~--~~~~v~~~d~~~~~~~~~~~~~~----~------~~~~~s---~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 250 S--KAAEVLVVDTRNGNILAKVAAPE----S------LAVLFN---PARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp S--SSSEEEEEETTTCCEEEEEECSS----C------CCEEEE---TTTTEEEEEETTT--TEEEEEETTTTEEEEEEEC
T ss_pred C--CCCEEEEEECCCCcEEEEEEcCC----C------ceEEEC---CCCCEEEEEECCC--CeEEEEECCCCeEEEEEec
Confidence 4 34578889998887554433211 1 123333 3788777766444 46778898877664 3433
Q ss_pred CCcceEee--eecCCEEEEEEec
Q 006979 399 PFTDIDNI--TLGNDCLFVEGAS 419 (623)
Q Consensus 399 ~~~~v~~~--~~~~~~~~~~~~s 419 (623)
+. ....+ +++++.+++....
T Consensus 313 ~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 313 PT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CS-EEEEEEECTTSCEEEEEEEC
T ss_pred CC-CCCeEEEcCCCCEEEEEEcc
Confidence 32 23333 6778877777654
No 49
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=6.4e-13 Score=151.63 Aligned_cols=263 Identities=11% Similarity=0.039 Sum_probs=165.0
Q ss_pred EEeCCEEEEEeCCC----CcEEEEeCC---CCCCCceecCCCC---CCCCeeecceeeCCCCCEEEEEEeccCCCCCCce
Q 006979 151 RIFGDTVIFSNYKD----QRLYKHSID---SKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 151 ~~s~d~l~f~~~~~----~~l~~~d~~---~g~~~~~~Lt~~~---~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~ 220 (623)
.+.++.++|..... ..||+.+.. ++ ..++|.+.. .........++|||||++|+|...+.+. ..
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~----e~ 188 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGT--KGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS----DW 188 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTC--CCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC----SE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCC--CCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC----ce
Confidence 46677888876543 358999986 55 556643320 0111356789999999999998775432 23
Q ss_pred eEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCC------CCCceEEEEEEecCCCceeeeEEEcC
Q 006979 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM------PWDKAELWVGYISENGDVYKRVCVAG 294 (623)
Q Consensus 221 ~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~------p~~~~~L~v~d~~~~~~~~~~~~~~~ 294 (623)
.+|+++|+++|+ .............+.|||| ++|+|.+.+.+.. .....+||+.++.++.. ....+...
T Consensus 189 ~~i~v~dl~tg~---~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~lv~~~ 263 (741)
T 1yr2_A 189 RTVKFVGVADGK---PLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS-ADQPVFAT 263 (741)
T ss_dssp EEEEEEETTTCC---EEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-GCEEEECC
T ss_pred EEEEEEECCCCC---CCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-hCEEEecc
Confidence 689999999997 4333211112356899999 9999998654310 00134699999876531 11233333
Q ss_pred CCCCccccCcCceeCCCCc-EEEEEeCC-CCeeeEEEEecCCC--e-EEEEeecccccccccccccCcceeEEeecCCCC
Q 006979 295 FDPTIVESPTEPKWSSKGE-LFFVTDRK-NGFWNLHKWIESNN--E-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKN 369 (623)
Q Consensus 295 ~~~~~~~~~~~~~ws~DG~-l~~~~~~~-~g~~~L~~~d~~~~--~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~ 369 (623)
.+.. .....+.|||||+ |++.+.+. ++...||.+|++++ + .+.|.........+ +. ++++
T Consensus 264 ~~~~--~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~----------~~---~dg~ 328 (741)
T 1yr2_A 264 PELP--KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF----------VD---GVGD 328 (741)
T ss_dssp TTCT--TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE----------EE---EETT
T ss_pred CCCC--eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE----------Ee---ccCC
Confidence 2211 2356789999999 77777652 14568999999887 5 66776432111111 11 2889
Q ss_pred EEEEEEEECC-eEEEEEEeCCCC--ceeecccCC-cceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcceeee
Q 006979 370 LIACSYRQNG-RSYLGILDDFGH--SLSLLDIPF-TDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 440 (623)
Q Consensus 370 ~l~~~~~~~g-~~~L~~~d~~~~--~~~~lt~~~-~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt 440 (623)
.|++.+++++ ..+|+++|++++ +++.+.... ..+..+...++.+++...... ..+|+.++++++..+.|+
T Consensus 329 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 329 QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDA-KSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETT-EEEEEEEETTSCEEEECB
T ss_pred EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECC-EEEEEEEeCCCCceeecc
Confidence 9999887654 678999999874 566665433 234455555777877765433 357999998766554443
No 50
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.55 E-value=1e-14 Score=150.54 Aligned_cols=142 Identities=22% Similarity=0.207 Sum_probs=108.7
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.+.+. +|..++++++.|++ .++.|+||++||++... ..+... ..++++||.|+.+|+||.|+++
T Consensus 81 ~~~~~~~~~~-~g~~l~~~~~~P~~-------~~~~p~vv~~HG~g~~~--~~~~~~-~~~~~~G~~v~~~D~rG~g~s~ 149 (346)
T 3fcy_A 81 ECYDLYFTGV-RGARIHAKYIKPKT-------EGKHPALIRFHGYSSNS--GDWNDK-LNYVAAGFTVVAMDVRGQGGQS 149 (346)
T ss_dssp EEEEEEEECG-GGCEEEEEEEEESC-------SSCEEEEEEECCTTCCS--CCSGGG-HHHHTTTCEEEEECCTTSSSSC
T ss_pred EEEEEEEEcC-CCCEEEEEEEecCC-------CCCcCEEEEECCCCCCC--CChhhh-hHHHhCCcEEEEEcCCCCCCCC
Confidence 5678888887 89999999999986 56789999999996443 334333 3677999999999999988665
Q ss_pred hhHHHh----------------hccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEE
Q 006979 540 REFRER----------------LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGA 602 (623)
Q Consensus 540 ~~~~~~----------------~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v 602 (623)
...... ....+-...++|+.++++++.++..+|++||+|+|+|+||++++.++ .+|+ ++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~v 228 (346)
T 3fcy_A 150 QDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVV 228 (346)
T ss_dssp CCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEE
T ss_pred CCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEE
Confidence 432110 00000012368999999999999889999999999999999999999 7887 99999
Q ss_pred ecccC-CCHHHh
Q 006979 603 SLYGV-SIPVII 613 (623)
Q Consensus 603 ~~~g~-~d~~~~ 613 (623)
+.+|. .++...
T Consensus 229 l~~p~~~~~~~~ 240 (346)
T 3fcy_A 229 SEYPFLSDYKRV 240 (346)
T ss_dssp EESCSSCCHHHH
T ss_pred ECCCcccCHHHH
Confidence 99996 454443
No 51
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.55 E-value=1.6e-13 Score=162.73 Aligned_cols=311 Identities=9% Similarity=-0.021 Sum_probs=182.9
Q ss_pred hccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeC
Q 006979 85 SGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNY 162 (623)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~ 162 (623)
+........++||| |+.|.|...++.+.+...|+.++..+| +.+.++.....++++.+++ ...++++| .++|+..
T Consensus 49 t~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g-~~~~lt~~~~~~~~~~~~~--~~~~~SpDg~ll~~~~ 125 (1045)
T 1k32_A 49 VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG-EIKRITYFSGKSTGRRMFT--DVAGFDPDGNLIISTD 125 (1045)
T ss_dssp ECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT-EEEECCCCCEEEETTEECS--EEEEECTTCCEEEEEC
T ss_pred eeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCC-CeEEcccCCCccccccccc--ccccCCCCCEEEEEEC
Confidence 33344567899999 888999987754457777888876643 5566665442333333332 45566655 5778765
Q ss_pred CC------CcEEEEeCCCCCCCceecCCCCCCC----------------------------------------------C
Q 006979 163 KD------QRLYKHSIDSKDSSPLPITPDYGEP----------------------------------------------L 190 (623)
Q Consensus 163 ~~------~~l~~~d~~~g~~~~~~Lt~~~~~~----------------------------------------------~ 190 (623)
.+ .+||.++++++ ..++++...... .
T Consensus 126 ~~~~~~~~~~l~~~~~~~g--~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~ 203 (1045)
T 1k32_A 126 AMQPFSSMTCLYRVENDGI--NFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMS 203 (1045)
T ss_dssp TTSSSTTCCEEEEEEGGGT--EEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCS
T ss_pred CcCCCcccceEEEEECCCC--CeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCC
Confidence 33 46999999876 566666531000 0
Q ss_pred eeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCC----
Q 006979 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHP---- 266 (623)
Q Consensus 191 ~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~---- 266 (623)
.....+.|+|| .++|+..... ...||.++++++. .++++...++ ..+.|||||++|+|.. +..
T Consensus 204 ~~v~~~~~s~d--~l~~~~~~dg------~~~l~~~~~~g~~---~~~l~~~~~~-~~~~~SpDG~~la~~~-~~~i~~~ 270 (1045)
T 1k32_A 204 THVSSPVIVGH--RIYFITDIDG------FGQIYSTDLDGKD---LRKHTSFTDY-YPRHLNTDGRRILFSK-GGSIYIF 270 (1045)
T ss_dssp SCCEEEEEETT--EEEEEECTTS------SCEEEEEETTSCS---CEECCCCCSS-CEEEEEESSSCEEEEE-TTEEEEE
T ss_pred CcccceEEeCC--EEEEEEeccC------ceEEEEEeCCCCc---ceEecCCCCc-ceeeEcCCCCEEEEEe-CCEEEEe
Confidence 01112345554 4555543221 2578888887766 5666554433 3357777777776653 110
Q ss_pred -----------C------------------CCC---C--------ceEEEEEEecCCCceeeeEEEcCCCCCccccCcCc
Q 006979 267 -----------N------------------MPW---D--------KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (623)
Q Consensus 267 -----------~------------------~p~---~--------~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (623)
. +.| + ...|+++++.++ ....+.... . ..+..+
T Consensus 271 d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~----~~~~~~~~~-~--~~~~~~ 343 (1045)
T 1k32_A 271 NPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGT----YVLKVPEPL-R--IRYVRR 343 (1045)
T ss_dssp CTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSS----BEEECSCCS-C--EEEEEE
T ss_pred cCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCC----ceEEccCCC-c--ceEEee
Confidence 0 000 0 012333333322 111222222 0 145678
Q ss_pred eeCCCCc-EEEEEeCCCCeeeEE-EEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 307 KWSSKGE-LFFVTDRKNGFWNLH-KWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 307 ~ws~DG~-l~~~~~~~~g~~~L~-~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
.|+ ||+ +++.++. ..|+ .+|..+++.+.++.....+..+.|++ |++.|++...+ ..|+
T Consensus 344 ~~s-dg~~l~~~s~~----~~l~~~~d~~~~~~~~l~~~~~~~~~~~~Sp------------DG~~la~~~~~---~~v~ 403 (1045)
T 1k32_A 344 GGD-TKVAFIHGTRE----GDFLGIYDYRTGKAEKFEENLGNVFAMGVDR------------NGKFAVVANDR---FEIM 403 (1045)
T ss_dssp CSS-SEEEEEEEETT----EEEEEEEETTTCCEEECCCCCCSEEEEEECT------------TSSEEEEEETT---SEEE
T ss_pred eEc-CCCeEEEEECC----CceEEEEECCCCCceEecCCccceeeeEECC------------CCCEEEEECCC---CeEE
Confidence 999 998 7776652 4788 88988888777763333334444443 88888876532 3788
Q ss_pred EEeCCCCceeecc-cCCcceEee--eecCCEEEEEEecC------CCCCeEEEEEcCCCcceeee
Q 006979 385 ILDDFGHSLSLLD-IPFTDIDNI--TLGNDCLFVEGASG------VEPSSVAKVTLDDHKLKAVD 440 (623)
Q Consensus 385 ~~d~~~~~~~~lt-~~~~~v~~~--~~~~~~~~~~~~s~------~~~~~ly~~~l~~~~~~~lt 440 (623)
++|+++++.+.+. .....+..+ +++++++++..... .....|+++++++++.+.++
T Consensus 404 ~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 404 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred EEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 9999999888776 333333333 88898888877643 34568999999888755544
No 52
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=1.7e-14 Score=140.19 Aligned_cols=136 Identities=19% Similarity=0.202 Sum_probs=104.6
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.++. +|..+.++++.|.+. .++.|+||++||... ....+...++.|+++||.|+.+|+||.++..
T Consensus 5 ~~~~~~~~~--~~~~~~~~~~~p~~~------~~~~p~vv~~HG~~g--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 74 (241)
T 3f67_A 5 IAGETSIPS--QGENMPAYHARPKNA------DGPLPIVIVVQEIFG--VHEHIRDLCRRLAQEGYLAIAPELYFRQGDP 74 (241)
T ss_dssp EEEEEEEEE--TTEEEEEEEEEETTC------CSCEEEEEEECCTTC--SCHHHHHHHHHHHHTTCEEEEECTTTTTCCG
T ss_pred eeeeEEEec--CCcceEEEEecCCCC------CCCCCEEEEEcCcCc--cCHHHHHHHHHHHHCCcEEEEecccccCCCC
Confidence 345677777 688999999999762 356899999999743 3345667788899999999999999876654
Q ss_pred hhHHH-------hhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 540 REFRE-------RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 540 ~~~~~-------~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
..+.. ...........+|+.+++++|.+++ +|++||+++|+|+||++++.++ .+|+ ++++|+.+|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~ 148 (241)
T 3f67_A 75 NEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGK 148 (241)
T ss_dssp GGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCC
T ss_pred CchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEecc
Confidence 43211 1111122345789999999999998 8899999999999999999999 6776 7788887776
No 53
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.52 E-value=2.1e-14 Score=146.03 Aligned_cols=132 Identities=23% Similarity=0.273 Sum_probs=105.8
Q ss_pred CCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcC-ceEEEEECCCCC
Q 006979 458 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGS 535 (623)
Q Consensus 458 ~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~-G~~v~~~d~rGs 535 (623)
....+.+.+++. +| .+.+++|.|.+ .++.|+||++|||++. .....+...+..|+++ ||.|+.+||||.
T Consensus 48 ~~~~~~~~i~~~-~g-~~~~~~~~P~~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~ 118 (313)
T 2wir_A 48 IHRVEDITIPGR-GG-PIRARVYRPRD-------GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLA 118 (313)
T ss_dssp CSEEEEEEEEET-TE-EEEEEEEECSC-------CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCT
T ss_pred CceEEEEEeeCC-CC-cEEEEEEecCC-------CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCC
Confidence 446778889886 66 89999999976 4557999999998632 3334566778888874 999999999997
Q ss_pred CCCchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCCc----eeEEEecccC
Q 006979 536 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRDT----FKAGASLYGV 607 (623)
Q Consensus 536 ~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~~----f~a~v~~~g~ 607 (623)
+++.. ....+|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++. ++++|+.+|+
T Consensus 119 g~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~ 187 (313)
T 2wir_A 119 PEHKF-----------PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPA 187 (313)
T ss_dssp TTSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCC
T ss_pred CCCCC-----------CchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCc
Confidence 65422 234689999999998863 27888999999999999999988 66665 9999999999
Q ss_pred CC
Q 006979 608 SI 609 (623)
Q Consensus 608 ~d 609 (623)
.|
T Consensus 188 ~~ 189 (313)
T 2wir_A 188 VN 189 (313)
T ss_dssp CC
T ss_pred cC
Confidence 88
No 54
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.52 E-value=4.8e-14 Score=138.36 Aligned_cols=134 Identities=19% Similarity=0.170 Sum_probs=102.8
Q ss_pred EEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHH
Q 006979 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFR 543 (623)
Q Consensus 464 i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~ 543 (623)
+++.. +|.+++++++.|.+. .++.|.||++||.+.......|...++.|+++||.|+.+|+||.|.+.....
T Consensus 4 ~~~~~--~g~~l~~~~~~p~~~------~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~ 75 (251)
T 2wtm_A 4 MYIDC--DGIKLNAYLDMPKNN------PEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFE 75 (251)
T ss_dssp EEEEE--TTEEEEEEEECCTTC------CSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG
T ss_pred eEEec--CCcEEEEEEEccCCC------CCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccc
Confidence 45554 789999999988641 2456899999998554223456677888999999999999999776543211
Q ss_pred HhhccCCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHH
Q 006979 544 ERLLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 544 ~~~~~~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
.+. ....+|+.++++++.++..+ +++.++||||||.+++.++ .+|++++++|..+|...+..
T Consensus 76 -----~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 139 (251)
T 2wtm_A 76 -----DHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPE 139 (251)
T ss_dssp -----GCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHH
T ss_pred -----cCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHH
Confidence 111 12468899999999876544 4999999999999999998 88999999999999876543
No 55
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.52 E-value=6.6e-14 Score=134.05 Aligned_cols=133 Identities=16% Similarity=0.152 Sum_probs=105.1
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCC--CCCCEEEEecCCCCCc---ccCcCCHHhHHHHcCceEEEEECCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPE--EKPPLLVKSHGGPTSE---ARGILNLSIQYWTSRGWAFVDVNYG 533 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~--~~~Pliv~~hGg~~~~---~~~~~~~~~~~~a~~G~~v~~~d~r 533 (623)
...+.+.+++. +| .+.++++.|.+ . ++.|+||++||++... ....+...++.|+++||.|+.+|+|
T Consensus 8 ~~~~~~~~~~~-~g-~~~~~~~~p~~-------~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (220)
T 2fuk_A 8 TESAALTLDGP-VG-PLDVAVDLPEP-------DVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFR 78 (220)
T ss_dssp SSCEEEEEEET-TE-EEEEEEECCCT-------TSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCT
T ss_pred ccceEEEEeCC-CC-eEEEEEEeCCC-------CCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecC
Confidence 35678899987 77 89999999976 3 4589999999964321 2223456788899999999999999
Q ss_pred CCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 534 GSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 534 Gs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
|.+.....+ .......+|+.++++++.++. +.++|+++|+|+||++++.++ .+ .++++|..+|..+.
T Consensus 79 g~g~s~~~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 79 SVGTSAGSF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR 146 (220)
T ss_dssp TSTTCCSCC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT
T ss_pred CCCCCCCCc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc
Confidence 977654332 233456899999999999874 678999999999999999998 55 79999999998765
No 56
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.52 E-value=3.2e-14 Score=144.19 Aligned_cols=143 Identities=22% Similarity=0.190 Sum_probs=106.7
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.+++. +|..++++++.|++ .++.|+||++||++... ...+ .....++++||.|+.+|+||.+++.
T Consensus 55 ~~~~~~~~~~-~g~~i~~~~~~P~~-------~~~~p~vv~~HG~~~~~-~~~~-~~~~~l~~~g~~v~~~d~rg~g~s~ 124 (318)
T 1l7a_A 55 KVYRLTYKSF-GNARITGWYAVPDK-------EGPHPAIVKYHGYNASY-DGEI-HEMVNWALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp EEEEEEEEEG-GGEEEEEEEEEESS-------CSCEEEEEEECCTTCCS-GGGH-HHHHHHHHTTCEEEEECCTTTSSSC
T ss_pred EEEEEEEEcc-CCCEEEEEEEeeCC-------CCCccEEEEEcCCCCCC-CCCc-ccccchhhCCcEEEEecCCCCCCCC
Confidence 4677888887 88899999999976 46679999999996430 2222 2334788899999999999988765
Q ss_pred hhHHHhhc-----cCCc---------cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEec
Q 006979 540 REFRERLL-----GRWG---------IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASL 604 (623)
Q Consensus 540 ~~~~~~~~-----~~~g---------~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~ 604 (623)
..+..... -..+ ....+|+.++++|+.+++.+|++||+++|+|+||++++.++ .+|+ ++++|..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~ 203 (318)
T 1l7a_A 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEE
T ss_pred CcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEec
Confidence 43210000 0011 23478999999999999889999999999999999999998 6776 6667778
Q ss_pred ccC-CCHHHh
Q 006979 605 YGV-SIPVII 613 (623)
Q Consensus 605 ~g~-~d~~~~ 613 (623)
+|. .++...
T Consensus 204 ~p~~~~~~~~ 213 (318)
T 1l7a_A 204 YPYLSNFERA 213 (318)
T ss_dssp SCCSCCHHHH
T ss_pred CCcccCHHHH
Confidence 885 555544
No 57
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.52 E-value=1.4e-14 Score=144.53 Aligned_cols=146 Identities=17% Similarity=0.163 Sum_probs=98.8
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCceEEEEECC--CCCCC
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNY--GGSTG 537 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G~~v~~~d~--rGs~~ 537 (623)
.+.+.+.+...|..+...+|.|++. + .+++|+||++||++...... ......+.++++||+|+.+|+ ||.++
T Consensus 16 ~~~~~~~s~~~~~~~~~~v~~P~~~--~---~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~ 90 (282)
T 3fcx_A 16 QKVFEHDSVELNCKMKFAVYLPPKA--E---TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNI 90 (282)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGGG--G---TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC
T ss_pred EEEEEEEchhcCCeeEEEEEcCCCC--C---CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccc
Confidence 3445555443688999999999762 1 46789999999985443221 111235778899999999999 88776
Q ss_pred Cchh-----------HHHhhccCCcc--chHHHHH-HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEE
Q 006979 538 YGRE-----------FRERLLGRWGI--VDVNDCC-SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGA 602 (623)
Q Consensus 538 ~g~~-----------~~~~~~~~~g~--~~~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v 602 (623)
.|.. |.......+.. ....++. .+++++.++..+|++||+|+|+|+||++++.++ .+|++|+++|
T Consensus 91 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 170 (282)
T 3fcx_A 91 KGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVS 170 (282)
T ss_dssp --------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEE
T ss_pred ccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEE
Confidence 5543 11111111100 1223333 555566545458999999999999999999999 8899999999
Q ss_pred ecccCCCHH
Q 006979 603 SLYGVSIPV 611 (623)
Q Consensus 603 ~~~g~~d~~ 611 (623)
+.+|+.++.
T Consensus 171 ~~s~~~~~~ 179 (282)
T 3fcx_A 171 AFAPICNPV 179 (282)
T ss_dssp EESCCCCGG
T ss_pred EeCCccCcc
Confidence 999998753
No 58
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.51 E-value=1.2e-14 Score=148.73 Aligned_cols=119 Identities=18% Similarity=0.115 Sum_probs=94.2
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc-CcCCHHhHHHHc-CceEEEEECCCCCCCCchhHHHhhccCCc
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWG 551 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~-~~~~~~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~~~~~g 551 (623)
.+++++|.|.+ .++.|+||++|||++.... ..+......++. .||+|+.+|||+++++. .
T Consensus 66 ~i~~~~~~p~~-------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~ 127 (322)
T 3fak_A 66 GCAAEWVRAPG-------CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------F 127 (322)
T ss_dssp TEEEEEEECTT-------CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------T
T ss_pred CeEEEEEeCCC-------CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------C
Confidence 38889999976 4668999999998643222 234455666666 69999999999876532 2
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC----ceeEEEecccCCCHH
Q 006979 552 IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD----TFKAGASLYGVSIPV 611 (623)
Q Consensus 552 ~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~----~f~a~v~~~g~~d~~ 611 (623)
...++|+.++++|+.++ .+|++||+|+|+|+||++++.++ ..++ .++++|+.+|+.|+.
T Consensus 128 ~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 191 (322)
T 3fak_A 128 PAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMT 191 (322)
T ss_dssp THHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTT
T ss_pred CcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCc
Confidence 23479999999999998 67999999999999999999888 5444 499999999999874
No 59
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.51 E-value=7.8e-14 Score=145.15 Aligned_cols=139 Identities=16% Similarity=0.141 Sum_probs=102.1
Q ss_pred CCcEEEEeecCCCCeEEEEEEEc-CCCCCC----------------CCCCCCCCCEEEEecCCCCCcccC---cCCHHhH
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYP-PSNPIY----------------QASPEEKPPLLVKSHGGPTSEARG---ILNLSIQ 518 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~-P~~~~~----------------~~~~~~~~Pliv~~hGg~~~~~~~---~~~~~~~ 518 (623)
...+.+.+... +| +.+.+|. |+...- ..+.+++.|+||++|||++..... .+...++
T Consensus 62 v~~~dv~~~~~-~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~ 138 (365)
T 3ebl_A 62 VSSFDHIIDQS-VG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCR 138 (365)
T ss_dssp EEEEEEEEETT-TT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHH
T ss_pred CceeeEEecCC-CC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHH
Confidence 35577888776 77 6666776 764200 001246789999999996533322 2456678
Q ss_pred HHHcC-ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCC----CCCCC-ceEEEEcChHHHHHHHHh
Q 006979 519 YWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG----KADEK-RLCITGGSAGGYTTLAAL 592 (623)
Q Consensus 519 ~~a~~-G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~----~~d~~-rv~i~G~S~GG~~~~~~~ 592 (623)
.|+++ ||+|+.+|||++++... ...++|+.++++|+.++. .+|++ ||+|+|+|+||++++.++
T Consensus 139 ~la~~~g~~Vv~~dyR~~p~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a 207 (365)
T 3ebl_A 139 RFVKLSKGVVVSVNYRRAPEHRY-----------PCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVA 207 (365)
T ss_dssp HHHHHHTSEEEEECCCCTTTSCT-----------THHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHCCCEEEEeeCCCCCCCCC-----------cHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHH
Confidence 88886 99999999998764321 234789999999999765 58999 999999999999999888
Q ss_pred -cCCC---ceeEEEecccCCCHH
Q 006979 593 -AFRD---TFKAGASLYGVSIPV 611 (623)
Q Consensus 593 -~~~~---~f~a~v~~~g~~d~~ 611 (623)
..++ .++++|+.+|+.|+.
T Consensus 208 ~~~~~~~~~~~g~vl~~p~~~~~ 230 (365)
T 3ebl_A 208 VRAADEGVKVCGNILLNAMFGGT 230 (365)
T ss_dssp HHHHHTTCCCCEEEEESCCCCCS
T ss_pred HHHHhcCCceeeEEEEccccCCC
Confidence 5444 799999999998753
No 60
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.51 E-value=5.4e-14 Score=139.92 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=101.7
Q ss_pred EEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcCceEEEEECCCCCCCCchhH
Q 006979 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREF 542 (623)
Q Consensus 464 i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~ 542 (623)
..+... +|..+.+++..|... . ++++.|+||++|||++. .....+...+..|+++||.|+.+|+||.+.....
T Consensus 17 ~~~~~~-~g~~l~~~~~~~~~~--~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~- 90 (276)
T 3hxk_A 17 STFSLN-DTAWVDFYQLQNPRQ--N--ENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNY- 90 (276)
T ss_dssp EECCCB-TTBEEEEECCCC----------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCS-
T ss_pred ccccCC-CCeEEEEEEeCCccc--c--cCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCC-
Confidence 445555 788888777666431 1 13678999999998633 3334556788899999999999999997653210
Q ss_pred HHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-c-CCCceeEEEecccCCCHHH
Q 006979 543 RERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-A-FRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 543 ~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~-~~~~f~a~v~~~g~~d~~~ 612 (623)
.......+|+.++++++.++. .+|++||+|+|+|+||++++.++ . ++..++++|+.+|+.++..
T Consensus 91 ------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~ 159 (276)
T 3hxk_A 91 ------NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTF 159 (276)
T ss_dssp ------CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTS
T ss_pred ------CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHh
Confidence 001135789999999998853 37899999999999999999999 4 5889999999999988544
No 61
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.51 E-value=3.7e-14 Score=144.00 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=106.4
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcC-ceEEEEECCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGST 536 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~-G~~v~~~d~rGs~ 536 (623)
...+.+.++.. +| .+.+++|.|.+. .++.|+||++|||++. .....+...+..|+++ ||.|+.+||||.+
T Consensus 46 ~~~~~~~i~~~-~g-~l~~~~~~P~~~------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~ 117 (310)
T 2hm7_A 46 AEVREFDMDLP-GR-TLKVRMYRPEGV------EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAP 117 (310)
T ss_dssp SEEEEEEEEET-TE-EEEEEEEECTTC------CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred ceEEEEEeccC-CC-eEEEEEEecCCC------CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCC
Confidence 35677888886 66 899999999751 3457999999998633 3334566778888886 9999999999977
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCC----ceeEEEecccCC
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRD----TFKAGASLYGVS 608 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~----~f~a~v~~~g~~ 608 (623)
++.. ....+|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++ .++++|..+|..
T Consensus 118 ~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~ 186 (310)
T 2hm7_A 118 EHKF-----------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 186 (310)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCC
T ss_pred CCCC-----------CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCc
Confidence 6432 134689999999999875 36889999999999999999988 5554 699999999988
Q ss_pred CHH
Q 006979 609 IPV 611 (623)
Q Consensus 609 d~~ 611 (623)
|+.
T Consensus 187 ~~~ 189 (310)
T 2hm7_A 187 GYD 189 (310)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 62
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.50 E-value=3.4e-12 Score=145.55 Aligned_cols=259 Identities=7% Similarity=-0.012 Sum_probs=163.0
Q ss_pred EeCCEEEEEeCCCCc----EEEEeCC--CCCC--CceecCCCC---CC-CCeeecceeeC-CCCCEEEEEEeccCCCCCC
Q 006979 152 IFGDTVIFSNYKDQR----LYKHSID--SKDS--SPLPITPDY---GE-PLVSYADGIFD-PRFNRYVTVREDRRQDALN 218 (623)
Q Consensus 152 ~s~d~l~f~~~~~~~----l~~~d~~--~g~~--~~~~Lt~~~---~~-~~~~~~d~~~s-PdG~~l~~v~~~~~~~~~~ 218 (623)
..++.++|.....++ +|+.+.. .+ . ..+.|.+.. +. .......++|| |||++|+|+....+.
T Consensus 124 ~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~-~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~---- 198 (751)
T 2xe4_A 124 VYGKYRYYTREVKGKPYKIYCRVFTDKEPG-DVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGN---- 198 (751)
T ss_dssp EETTEEEEEEECTTCCSCEEEEEETTSCTT-CTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSS----
T ss_pred EECCEEEEEEECCCCceeEEEEEcCCCCCC-CCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCC----
Confidence 456678887655433 6777651 23 1 233433220 01 11245678999 999999998875432
Q ss_pred ceeEEEEEEcCCC-CcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCC
Q 006979 219 STTEIVAIALNGQ-NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP 297 (623)
Q Consensus 219 ~~~~L~~idl~~g-~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~ 297 (623)
...+||++|+++| +.. ...+. .....+.|||||++|+|++.++.. ...+||+.++.++.. ....+..+.+
T Consensus 199 ~~~~l~v~dl~~g~~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~---~~~~v~~~~lgt~~~-~~~lv~~~~~- 269 (751)
T 2xe4_A 199 EVYTIEFKRISDPSQTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETL---RENKVWRHVMGKLQS-EDVCLYEEHN- 269 (751)
T ss_dssp SCEEEEEEETTCTTCCC-CCCEE---EECSCCEECSSTTEEEEEEECTTC---CEEEEEEEETTSCGG-GCEEEEECCC-
T ss_pred ceEEEEEEECCCCCEeC-Ccccc---CceeeEEEecCCCEEEEEEECCCC---CCCEEEEEECCCCch-hcEEEEecCC-
Confidence 2267999999998 510 01121 124578999999999999876532 345899999976521 1123333332
Q ss_pred CccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCC--eE--EEEeecccccccccccccCcceeEEeecCCCCEEE
Q 006979 298 TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN--EV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIA 372 (623)
Q Consensus 298 ~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~--~~--~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~ 372 (623)
. .....+.|||||+ |++.+.. .+...||.+|++++ +. +.|++.. ..+.|++. +. +++.|+
T Consensus 270 ~--~~~~~~~~SpDg~~l~~~~~~-~~~~~l~~~d~~~~~~~~~~~~l~~~~---~~~~~s~~-----~~----~g~~l~ 334 (751)
T 2xe4_A 270 P--LFSAFMYKAADTNTLCIGSQS-PETAEVHLLDLRKGNAHNTLEIVRPRE---KGVRYDVQ-----MH----GTSHLV 334 (751)
T ss_dssp T--TCEEEEEECTTSSEEEEEEEC-SSCEEEEEEESSSCTTCCCEEESSCCC---TTCCEEEE-----EE----TTTEEE
T ss_pred C--ceEEEEEECCCCCEEEEEecC-CCCceEEEEECCCCCCCceeEEeecCC---CCceEEEe-----ee----eCCEEE
Confidence 1 2345789999999 7777765 56778999999875 34 5665432 22333321 11 588999
Q ss_pred EEEEEC--CeEEEEEEeCCC-Cceee-cccCCc--ceEeeeecCCEEEEEEecCCCCCeEEEEEc-------CCCc-cee
Q 006979 373 CSYRQN--GRSYLGILDDFG-HSLSL-LDIPFT--DIDNITLGNDCLFVEGASGVEPSSVAKVTL-------DDHK-LKA 438 (623)
Q Consensus 373 ~~~~~~--g~~~L~~~d~~~-~~~~~-lt~~~~--~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l-------~~~~-~~~ 438 (623)
+.++++ +..+||++++++ ++++. |....+ .+..++..++.+++..... ...+|+++++ ++++ .+.
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~-g~~~l~~~dl~~~~~~~~~g~~~~~ 413 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA-GLTRIWTMMADSQDGVFKAGTGLRE 413 (751)
T ss_dssp EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEET-TEEEEEEEECCTTTSCCCTTTCCEE
T ss_pred EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeC-CEEEEEEEecccccccccCCccceE
Confidence 998875 678999999886 45555 433333 2445566778888777543 3468999996 5665 555
Q ss_pred ee
Q 006979 439 VD 440 (623)
Q Consensus 439 lt 440 (623)
|+
T Consensus 414 l~ 415 (751)
T 2xe4_A 414 VV 415 (751)
T ss_dssp CC
T ss_pred EC
Confidence 53
No 63
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.50 E-value=1.1e-13 Score=146.98 Aligned_cols=115 Identities=13% Similarity=0.195 Sum_probs=97.3
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccc
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV 553 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~ 553 (623)
.+.++++.|.+ .++.|+||++||++.. .+...++.|+++||.|+++||||.++... .....
T Consensus 144 ~l~~~l~~P~~-------~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~~~--------~~~~~ 204 (422)
T 3k2i_A 144 RVRATLFLPPG-------PGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDLPN--------NMDNI 204 (422)
T ss_dssp TEEEEEEECSS-------SCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTSCS--------SCSCE
T ss_pred cEEEEEEcCCC-------CCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCCCC--------CcccC
Confidence 58999999976 5668999999998533 34567899999999999999999765433 23335
Q ss_pred hHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 554 DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 554 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
..+|+.++++||.++..+|++||+|+|+|+||++++.++ .+|+ ++++|+++|..
T Consensus 205 ~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~ 259 (422)
T 3k2i_A 205 SLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSG 259 (422)
T ss_dssp ETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCS
T ss_pred CHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcc
Confidence 689999999999999889999999999999999999998 7887 99999999886
No 64
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.49 E-value=1.4e-13 Score=140.76 Aligned_cols=132 Identities=17% Similarity=0.131 Sum_probs=103.8
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCC-CcccCcCCHHhHHHHcC-ceEEEEECCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPT-SEARGILNLSIQYWTSR-GWAFVDVNYGGST 536 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~-~~~~~~~~~~~~~~a~~-G~~v~~~d~rGs~ 536 (623)
...+.+.++.. +| .+.+++|.|.+ .++.|+||++|||++ ......+...+..|+++ ||.|+.+||||.+
T Consensus 63 ~~~~~~~i~~~-~~-~i~~~iy~P~~-------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~ 133 (323)
T 3ain_A 63 GKIEDITIPGS-ET-NIKARVYYPKT-------QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAP 133 (323)
T ss_dssp SEEEEEEEECS-SS-EEEEEEEECSS-------CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred cEEEEEEecCC-CC-eEEEEEEecCC-------CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCC
Confidence 35678888876 66 89999999975 456799999999863 23344566778888864 9999999999976
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCCC-C-CCCceEEEEcChHHHHHHHHh-cCCCce---eEEEecccCCCH
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK-A-DEKRLCITGGSAGGYTTLAAL-AFRDTF---KAGASLYGVSIP 610 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~-~-d~~rv~i~G~S~GG~~~~~~~-~~~~~f---~a~v~~~g~~d~ 610 (623)
++.. ....+|+.++++|+.++.. . |++||+|+|+|+||++++.++ .+++.. ++.|..+|+.|+
T Consensus 134 ~~~~-----------p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 134 ENKF-----------PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred CCCC-----------cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 5421 2347899999999988631 1 789999999999999999888 666555 899999998874
No 65
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.49 E-value=1.6e-13 Score=146.69 Aligned_cols=116 Identities=14% Similarity=0.229 Sum_probs=97.2
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccc
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV 553 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~ 553 (623)
.+.+++|.|.+ .++.|+||++||+... .+...++.|+++||.|+++||||.++.... ....
T Consensus 160 ~l~~~l~~P~~-------~~~~P~Vv~lhG~~~~----~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~--------~~~~ 220 (446)
T 3hlk_A 160 RVRGTLFLPPE-------PGPFPGIVDMFGTGGG----LLEYRASLLAGKGFAVMALAYYNYEDLPKT--------METL 220 (446)
T ss_dssp TEEEEEEECSS-------SCCBCEEEEECCSSCS----CCCHHHHHHHTTTCEEEEECCSSSTTSCSC--------CSEE
T ss_pred eEEEEEEeCCC-------CCCCCEEEEECCCCcc----hhhHHHHHHHhCCCEEEEeccCCCCCCCcc--------hhhC
Confidence 58999999976 5667999999999543 344568999999999999999997654432 2335
Q ss_pred hHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 554 DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 554 ~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
..+|+.++++||.++..+|++||+|+|+|+||++++.++ .+|+ ++++|+.+|...
T Consensus 221 ~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~ 276 (446)
T 3hlk_A 221 HLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVA 276 (446)
T ss_dssp EHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSB
T ss_pred CHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCccc
Confidence 689999999999999989999999999999999999988 7787 999999998753
No 66
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.49 E-value=2.4e-13 Score=133.29 Aligned_cols=134 Identities=17% Similarity=0.243 Sum_probs=102.6
Q ss_pred CcE--EEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc---CcCCHHhHHHHcCceEEEEECCCC
Q 006979 460 LPE--LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR---GILNLSIQYWTSRGWAFVDVNYGG 534 (623)
Q Consensus 460 ~~~--~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~---~~~~~~~~~~a~~G~~v~~~d~rG 534 (623)
..| .+.+++. +| .+.++++.|.+ ++.|+||++||.+..... ..+...++.|+++||.|+.+|+||
T Consensus 20 ~~e~~~~~~~~~-~g-~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 89 (249)
T 2i3d_A 20 QGHMPEVIFNGP-AG-RLEGRYQPSKE--------KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRS 89 (249)
T ss_dssp ----CEEEEEET-TE-EEEEEEECCSS--------TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCceeEEEEECC-Cc-eEEEEEEcCCC--------CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCC
Confidence 445 8889887 66 89999998853 456899999997432211 123567888999999999999999
Q ss_pred CCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 535 STGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 535 s~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
.|.....+ .......+|+.++++++.+++ .|++||+++|+|+||++++.++ .+|+ ++++|+.+|..++.
T Consensus 90 ~G~s~~~~------~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 159 (249)
T 2i3d_A 90 IGRSQGEF------DHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY 159 (249)
T ss_dssp STTCCSCC------CSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS
T ss_pred CCCCCCCC------CCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhh
Confidence 76543321 123345699999999999875 4788999999999999999999 7887 99999999987653
No 67
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.49 E-value=4.5e-12 Score=150.21 Aligned_cols=267 Identities=11% Similarity=0.009 Sum_probs=177.3
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcEE
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l~ 168 (623)
..+..+.|+ ++.++++..+ ++...||..+..+ +..+.++... . .....|.+++..+++. .++.||
T Consensus 204 ~~v~~~~~s-~d~l~~~~~~---dg~~~l~~~~~~g-~~~~~l~~~~-~-------~~~~~~SpDG~~la~~--~~~~i~ 268 (1045)
T 1k32_A 204 THVSSPVIV-GHRIYFITDI---DGFGQIYSTDLDG-KDLRKHTSFT-D-------YYPRHLNTDGRRILFS--KGGSIY 268 (1045)
T ss_dssp SCCEEEEEE-TTEEEEEECT---TSSCEEEEEETTS-CSCEECCCCC-S-------SCEEEEEESSSCEEEE--ETTEEE
T ss_pred CcccceEEe-CCEEEEEEec---cCceEEEEEeCCC-CcceEecCCC-C-------cceeeEcCCCCEEEEE--eCCEEE
Confidence 445677888 5578887643 4777899887652 2444444322 1 1112344444467777 367799
Q ss_pred EEeCCCCCCCceecCCCCC--C-----CCeeecceeeC-CCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc
Q 006979 169 KHSIDSKDSSPLPITPDYG--E-----PLVSYADGIFD-PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (623)
Q Consensus 169 ~~d~~~g~~~~~~Lt~~~~--~-----~~~~~~d~~~s-PdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~ 240 (623)
++++.++ ....+..... . .......+.|| |||++|++... ..|+++++.++. .+.+.
T Consensus 269 ~~d~~~~--~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~----------~~i~~~~~~~~~---~~~~~ 333 (1045)
T 1k32_A 269 IFNPDTE--KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR----------GQAFIQDVSGTY---VLKVP 333 (1045)
T ss_dssp EECTTTC--CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEET----------TEEEEECTTSSB---EEECS
T ss_pred EecCCce--EeeeeccCcccccccccccccccceeeecCCCCCEEEEEEc----------CEEEEEcCCCCc---eEEcc
Confidence 9998544 4444443100 0 00135678899 99999999762 569999998887 66666
Q ss_pred cCCC-cccceeeCCCCCEEEEEEecCCCCCCCceEEE-EEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEE
Q 006979 241 SGSD-FYAFPRMDPRGERMAWIEWHHPNMPWDKAELW-VGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFV 317 (623)
Q Consensus 241 ~~~~-~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~-v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~ 317 (623)
.... ....+.|| ||++|+|... ...|| +++++++ ....+.+.. ..+..+.|+|||+ +++.
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~s~--------~~~l~~~~d~~~~----~~~~l~~~~----~~~~~~~~SpDG~~la~~ 396 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHGTR--------EGDFLGIYDYRTG----KAEKFEENL----GNVFAMGVDRNGKFAVVA 396 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEEET--------TEEEEEEEETTTC----CEEECCCCC----CSEEEEEECTTSSEEEEE
T ss_pred CCCcceEEeeeEc-CCCeEEEEEC--------CCceEEEEECCCC----CceEecCCc----cceeeeEECCCCCEEEEE
Confidence 5555 56678999 9999999873 24699 9998766 223333433 4567899999999 6665
Q ss_pred EeCCCCeeeEEEEecCCCeEEEEeec-ccccccccccccCcceeEEeecCCCCEEEEEEEEC-------CeEEEEEEeCC
Q 006979 318 TDRKNGFWNLHKWIESNNEVLAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDF 389 (623)
Q Consensus 318 ~~~~~g~~~L~~~d~~~~~~~~l~~~-~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~-------g~~~L~~~d~~ 389 (623)
++. + .|+++|+.+++.+.+... ...+..+.|++ |++.|++..... +...|+++|++
T Consensus 397 ~~~--~--~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp------------DG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 397 NDR--F--EIMTVDLETGKPTVIERSREAMITDFTISD------------NSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp ETT--S--EEEEEETTTCCEEEEEECSSSCCCCEEECT------------TSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCC--C--eEEEEECCCCceEEeccCCCCCccceEECC------------CCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 544 2 788999999988777632 22334444543 889888887653 45789999999
Q ss_pred CCceeecccCCcceEee--eecCCEEEEEEe
Q 006979 390 GHSLSLLDIPFTDIDNI--TLGNDCLFVEGA 418 (623)
Q Consensus 390 ~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~ 418 (623)
+++.+.++.....+..+ +++++++++...
T Consensus 461 ~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 461 GRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 98888887665444333 788888887764
No 68
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.49 E-value=6.1e-14 Score=145.53 Aligned_cols=136 Identities=17% Similarity=0.125 Sum_probs=106.9
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCC-HHhHHHHcCceEEEEECCCCCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGY 538 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~-~~~~~~a~~G~~v~~~d~rGs~~~ 538 (623)
..+.+.+++. +|..++++++.|.+. +.++.|+||++||++.. ...+. ..++.|+++||.|+.+|+||.|..
T Consensus 67 ~~~~~~~~~~-~g~~~~~~~~~p~~~-----~~~~~p~vv~~hG~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s 138 (367)
T 2hdw_A 67 EHRKVTFANR-YGITLAADLYLPKNR-----GGDRLPAIVIGGPFGAV--KEQSSGLYAQTMAERGFVTLAFDPSYTGES 138 (367)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEESSC-----CSSCEEEEEEECCTTCC--TTSHHHHHHHHHHHTTCEEEEECCTTSTTS
T ss_pred eeEEEEEecC-CCCEEEEEEEeCCCC-----CCCCCCEEEEECCCCCc--chhhHHHHHHHHHHCCCEEEEECCCCcCCC
Confidence 5678889887 899999999998762 14567999999998532 23333 367889999999999999997654
Q ss_pred chhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 539 GREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 539 g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
..... .........+|+.++++++.+++.+|++||+++|+|+||++++.++ .+| .++++|+.+|.
T Consensus 139 ~~~~~---~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 139 GGQPR---NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMY 204 (367)
T ss_dssp CCSSS---SCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred CCcCc---cccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccc
Confidence 33211 1111234679999999999999889999999999999999999999 677 58999999876
No 69
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.48 E-value=8.7e-14 Score=141.89 Aligned_cols=133 Identities=18% Similarity=0.109 Sum_probs=105.3
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCc-ccCcCCHHhHHHH-cCceEEEEECCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGST 536 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~-~~~~~~~~~~~~a-~~G~~v~~~d~rGs~ 536 (623)
...+.++++.. +|..|.+++|.|.+ ++.|+||++|||++.. ....+...+..++ +.||.|+.+|||+++
T Consensus 58 ~~~~~~~i~~~-~G~~i~~~~~~P~~--------~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p 128 (317)
T 3qh4_A 58 VAVADDVVTGE-AGRPVPVRIYRAAP--------TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAP 128 (317)
T ss_dssp CEEEEEEEECT-TSCEEEEEEEECSC--------SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTT
T ss_pred ceEEEEEecCC-CCCeEEEEEEecCC--------CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCC
Confidence 35678888887 88899999999964 4579999999986432 3334556677777 459999999999876
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhC---CCCCCCceEEEEcChHHHHHHHHh-cCCC----ceeEEEecccCC
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAAL-AFRD----TFKAGASLYGVS 608 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~-~~~~----~f~a~v~~~g~~ 608 (623)
++.. ...++|+.++++|+.++ ..+|++||+|+|+|+||++++.++ .+++ .+++.+..+|+.
T Consensus 129 ~~~~-----------p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~ 197 (317)
T 3qh4_A 129 EHPY-----------PAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVL 197 (317)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCC
T ss_pred CCCC-----------chHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECcee
Confidence 5322 23478999999999986 358899999999999999999888 4433 599999999998
Q ss_pred CHH
Q 006979 609 IPV 611 (623)
Q Consensus 609 d~~ 611 (623)
|..
T Consensus 198 ~~~ 200 (317)
T 3qh4_A 198 DDR 200 (317)
T ss_dssp CSS
T ss_pred cCC
Confidence 864
No 70
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.48 E-value=2.1e-13 Score=154.43 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=103.0
Q ss_pred CCeE--EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcc-------------------c-------------------
Q 006979 471 PGQK--AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-------------------R------------------- 510 (623)
Q Consensus 471 dg~~--i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~-------------------~------------------- 510 (623)
||.. |.+++|.|++ .+++|+||..||...... .
T Consensus 182 DG~~d~L~a~l~~P~~-------~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~ 254 (763)
T 1lns_A 182 RGENDLIKIQIIRPKS-------TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKE 254 (763)
T ss_dssp SSSCCEEEEEEEECCC-------SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCC
T ss_pred CCCeeeEEEEEEecCC-------CCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccc
Confidence 8988 9999999987 568899997765432210 0
Q ss_pred --------CcC-----CHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHh----------
Q 006979 511 --------GIL-----NLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVG---------- 567 (623)
Q Consensus 511 --------~~~-----~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~---------- 567 (623)
..| ....++|+++||+|+.+|+||.|+++..+ ..++..+.+|+.++++||.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~-----~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~ 329 (763)
T 1lns_A 255 LPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQ-----TSGDYQQIYSMTAVIDWLNGRARAYTSRKK 329 (763)
T ss_dssp CCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCC-----CTTSHHHHHHHHHHHHHHTTSSCEESSTTC
T ss_pred ccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcC-----CCCCHHHHHHHHHHHHHHhhcccccccccc
Confidence 011 13458999999999999999988765532 23455678999999999984
Q ss_pred -----CCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhh
Q 006979 568 -----SGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 568 -----~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~ 614 (623)
+++ +.+||+++|+||||++++.++ .+|+.++|+|+.+|++|+..+.
T Consensus 330 ~~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~ 381 (763)
T 1lns_A 330 THEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYY 381 (763)
T ss_dssp CCEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHH
T ss_pred cccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHh
Confidence 343 457999999999999999988 7888999999999999987654
No 71
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.48 E-value=5.4e-14 Score=140.64 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=104.3
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCC-CCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcCceEEEEECCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNP-IYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGST 536 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~-~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~G~~v~~~d~rGs~ 536 (623)
...+.+.+... +|..+...+| |... ++.. +++.|+||++|||++. .....+...+..|+++||.|+.+|+||.+
T Consensus 17 ~~~~~v~~~~~-~g~~~~~~~y-p~~~~~~~~--~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~ 92 (283)
T 3bjr_A 17 FQGMQVIKQKL-TATCAQLTGY-LHQPDTNAH--QTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLT 92 (283)
T ss_dssp CCSSEEEEEEC-TTSSCEEEEE-EC----------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTT
T ss_pred CCCcceEEeec-CCCceeEEEe-cCCcccccc--CCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCC
Confidence 45567888876 7877887888 6541 0111 4678999999998632 22234566788899999999999999976
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCCc-------------ee
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRDT-------------FK 599 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~~-------------f~ 599 (623)
..+. ......+|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++. ++
T Consensus 93 ~~~~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 163 (283)
T 3bjr_A 93 DQQP---------LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPN 163 (283)
T ss_dssp TCSS---------CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCS
T ss_pred cccc---------CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCcc
Confidence 6430 11234689999999998864 37888999999999999999998 78876 89
Q ss_pred EEEecccCCCH
Q 006979 600 AGASLYGVSIP 610 (623)
Q Consensus 600 a~v~~~g~~d~ 610 (623)
++|+.+|+.++
T Consensus 164 ~~v~~~p~~~~ 174 (283)
T 3bjr_A 164 NVVLGYPVISP 174 (283)
T ss_dssp SEEEESCCCCT
T ss_pred EEEEcCCcccc
Confidence 99999999874
No 72
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=5.8e-12 Score=142.52 Aligned_cols=261 Identities=10% Similarity=0.014 Sum_probs=159.9
Q ss_pred EeCCEEEEEeCCCC----cEEEEeCCCCCCCceecCCC---CCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 152 IFGDTVIFSNYKDQ----RLYKHSIDSKDSSPLPITPD---YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 152 ~s~d~l~f~~~~~~----~l~~~d~~~g~~~~~~Lt~~---~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
..++..++.....+ .+|+.+.+.+ .+.|-+. .+........++|||||++|+|+....+. ....|+
T Consensus 86 ~~g~~~y~~~~~~~~~~~~~~r~~~~~~---~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~----~~~~i~ 158 (693)
T 3iuj_A 86 REGRYHYFFKNDGLQNQNVLWRQQEGKP---AEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGS----DWREIH 158 (693)
T ss_dssp EETTEEEEEEECSSCSSCEEEEECTTSC---CEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSC----CEEEEE
T ss_pred EECCEEEEEEEcCCCceeEEEEeCCCCC---cEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCC----ceEEEE
Confidence 34556666544332 2666554332 3333221 01112356678999999999998765432 237899
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCC---C--CCCceEEEEEEecCCCceeeeEEEcCCCCCc
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPN---M--PWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~---~--p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~ 299 (623)
++|+++|+ .............++|| ||+.|+|.+.+.+. + .+...+||+.++.++.. ...++......-
T Consensus 159 v~dl~tg~---~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~--~~~~v~~~~~~~ 232 (693)
T 3iuj_A 159 LMDVESKQ---PLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE--DDRLVFGAIPAQ 232 (693)
T ss_dssp EEETTTCS---EEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG--GCEEEESCSGGG
T ss_pred EEECCCCC---CCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc--cceEEEecCCCC
Confidence 99999997 43332211113568999 99999999866430 0 01346799999876632 223333222000
Q ss_pred cccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCC--eEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEE
Q 006979 300 VESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN--EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 376 (623)
Q Consensus 300 ~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~--~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~ 376 (623)
......+.|||||+ |++.+.......+||.+|++++ +.+.|+........+ |. ++++.||+.++
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~------------~~g~~l~~~t~ 299 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VD------------NKGSTLYLLTN 299 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EE------------EETTEEEEEEC
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Ee------------ccCCEEEEEEC
Confidence 02345688999999 7676665223358999998776 566776432111111 22 27889999887
Q ss_pred ECC-eEEEEEEeCCCCce---eecccCC-cceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcceeee
Q 006979 377 QNG-RSYLGILDDFGHSL---SLLDIPF-TDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 440 (623)
Q Consensus 377 ~~g-~~~L~~~d~~~~~~---~~lt~~~-~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt 440 (623)
+++ ..+|+++|++++.. +.|+... ..+ .++.+++.+++...... ..+|++++++++..+.|+
T Consensus 300 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g-~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 300 RDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDA-TARVEQFDYEGKRVREVA 366 (693)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETT-EEEEEEECTTSCEEEEEC
T ss_pred CCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECC-eeEEEEEECCCCeeEEee
Confidence 654 57899999987654 5555433 334 67888999888776433 357999999877655443
No 73
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.48 E-value=1.5e-13 Score=135.75 Aligned_cols=136 Identities=13% Similarity=0.144 Sum_probs=106.3
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.+.. +|..++++++.|.+ ++.|+||++||.+.......+...+..|+++||.|+.+|+||.|...
T Consensus 21 ~~~~~~~~~--~g~~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 90 (270)
T 3pfb_A 21 GMATITLER--DGLQLVGTREEPFG--------EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSD 90 (270)
T ss_dssp EEEEEEEEE--TTEEEEEEEEECSS--------SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSS
T ss_pred cceEEEecc--CCEEEEEEEEcCCC--------CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCC
Confidence 445566654 79999999998864 34689999999865533344667888899999999999999977654
Q ss_pred hhHHHhhccCCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHH
Q 006979 540 REFRERLLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 540 ~~~~~~~~~~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
.... .+. ....+|+.++++++.++... ++|+|+|+|+||++++.++ .+|++++++|..+|..++..
T Consensus 91 ~~~~-----~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~ 158 (270)
T 3pfb_A 91 GKFE-----NMTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKG 158 (270)
T ss_dssp SCGG-----GCCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHH
T ss_pred CCCC-----ccCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccch
Confidence 4211 111 23468999999999887433 5999999999999999998 88999999999999987654
No 74
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.47 E-value=8.3e-14 Score=141.40 Aligned_cols=131 Identities=20% Similarity=0.249 Sum_probs=103.9
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcC-ceEEEEECCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGST 536 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~-G~~v~~~d~rGs~ 536 (623)
...+.+.++.. +| .+.+++|.|.+ ..+.|+||++||+++. .....+...+..|+++ ||.|+.+||||.+
T Consensus 46 ~~~~~~~i~~~-~g-~i~~~~~~p~~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g 116 (311)
T 2c7b_A 46 AETRDVHIPVS-GG-SIRARVYFPKK-------AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAP 116 (311)
T ss_dssp SEEEEEEEEET-TE-EEEEEEEESSS-------CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTT
T ss_pred ceEEEEEecCC-CC-cEEEEEEecCC-------CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCC
Confidence 46678888886 66 89999999976 4456999999998532 2333556677888876 9999999999977
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCC----ceeEEEecccCC
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRD----TFKAGASLYGVS 608 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~----~f~a~v~~~g~~ 608 (623)
++.. ....+|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++ .++++|..+|..
T Consensus 117 ~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 185 (311)
T 2c7b_A 117 EYKF-----------PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVV 185 (311)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCC
T ss_pred CCCC-----------CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCcc
Confidence 6422 124689999999998763 36889999999999999999888 5554 599999999998
Q ss_pred C
Q 006979 609 I 609 (623)
Q Consensus 609 d 609 (623)
|
T Consensus 186 ~ 186 (311)
T 2c7b_A 186 N 186 (311)
T ss_dssp C
T ss_pred C
Confidence 8
No 75
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.47 E-value=9.9e-14 Score=138.07 Aligned_cols=137 Identities=15% Similarity=0.066 Sum_probs=102.2
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCC-CCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNP-IYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~-~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
+.+.++. +|..+.+.+|.|... ++.. .++.|+||++|||++. .....+...+..|+++||.|+.+||||.|..+
T Consensus 5 ~~~~~~~--~~~~~~~~~~~p~~~~~~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 5 EQRTLNT--AAHPFQITAYWLDQISDFET--AVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEECS--TTCCEEEEEEEECCCCSSSC--CCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred EEEEecc--CCCcceEEEEeCCccccccc--CCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 4566644 577788888888731 0111 5678999999997533 22334556788899999999999999955322
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cC--------------CCceeEE
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AF--------------RDTFKAG 601 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~--------------~~~f~a~ 601 (623)
.. .....+|+.++++++.++. .+|++||+|+|+|+||++++.++ .+ +..++++
T Consensus 81 ~~---------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T 3bxp_A 81 SV---------YPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAI 151 (277)
T ss_dssp CC---------TTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEE
T ss_pred cc---------CchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEE
Confidence 21 1235789999999998763 27889999999999999999998 53 7789999
Q ss_pred EecccCCCHH
Q 006979 602 ASLYGVSIPV 611 (623)
Q Consensus 602 v~~~g~~d~~ 611 (623)
|+.+|+.|+.
T Consensus 152 v~~~p~~~~~ 161 (277)
T 3bxp_A 152 ILGYPVIDLT 161 (277)
T ss_dssp EEESCCCBTT
T ss_pred EEeCCcccCC
Confidence 9999998743
No 76
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.47 E-value=1.8e-13 Score=138.44 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=100.3
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
...+.+. . ++ +...+|.|++. .++.|+||++|||++. .....+...++.|+++||+|+.+||||.++..
T Consensus 58 ~~~i~y~-~-~~--~~~~~~~p~~~------~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~ 127 (303)
T 4e15_A 58 VDHLRYG-E-GR--QLVDVFYSEKT------TNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT 127 (303)
T ss_dssp EEEEECS-S-TT--CEEEEEECTTC------CTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC
T ss_pred eeeeccC-C-CC--cEEEEEecCCC------CCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC
Confidence 3445554 3 34 44556667541 4678999999998643 33345667789999999999999999977643
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHhC-CCCCCCceEEEEcChHHHHHHHHh-cCC-------CceeEEEecccCCCH
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAAL-AFR-------DTFKAGASLYGVSIP 610 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~-~~~-------~~f~a~v~~~g~~d~ 610 (623)
.. ...+|+.++++|+.+. ...+++||+|+|||+||++++.++ ... +.++++|+.+|+.|+
T Consensus 128 ~~-----------~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~ 196 (303)
T 4e15_A 128 LE-----------QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDL 196 (303)
T ss_dssp HH-----------HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCC
T ss_pred hh-----------HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeecc
Confidence 21 2368999999999873 235689999999999999999888 432 379999999999998
Q ss_pred HHhhh
Q 006979 611 VIISE 615 (623)
Q Consensus 611 ~~~~~ 615 (623)
..+..
T Consensus 197 ~~~~~ 201 (303)
T 4e15_A 197 RELSN 201 (303)
T ss_dssp HHHHT
T ss_pred Hhhhc
Confidence 77654
No 77
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.46 E-value=1.1e-12 Score=129.12 Aligned_cols=126 Identities=15% Similarity=0.113 Sum_probs=100.6
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCC-HHhHHHHcCceEEEEECCCCCCCCc
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILN-LSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~-~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
....+... +|..+++.+|.|.. +++.|+||++||++.. .....+. ..++.++++ |.|+.+|+||.+...
T Consensus 4 ~~~~~~~~-dg~~l~~~~~~p~~-------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~ 74 (275)
T 3h04_A 4 IKYKVITK-DAFALPYTIIKAKN-------QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS 74 (275)
T ss_dssp EEEEEECT-TSCEEEEEEECCSS-------SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC
T ss_pred eEEEEecC-CcEEEEEEEEccCC-------CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc
Confidence 45667776 89999999999975 4567999999998632 2223344 667777777 999999999876432
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCCCH
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~d~ 610 (623)
. ....+|+.++++++.++ ++.++|+|+|||+||++++.++.. +.++++|..+|..++
T Consensus 75 ~-----------~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~-~~v~~~v~~~~~~~~ 131 (275)
T 3h04_A 75 L-----------DCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD-RDIDGVIDFYGYSRI 131 (275)
T ss_dssp H-----------HHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH-SCCSEEEEESCCSCS
T ss_pred c-----------chhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc-CCccEEEeccccccc
Confidence 2 12478999999999988 667899999999999999999944 789999999999876
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=2.8e-11 Score=123.22 Aligned_cols=242 Identities=11% Similarity=0.064 Sum_probs=142.1
Q ss_pred eEEEeCC--EEEEEeCCCCcEEEEeCCCCCCC-ceecCCCCCCCCeeecc-eeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 149 AFRIFGD--TVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYAD-GIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 149 ~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~-~~~Lt~~~~~~~~~~~d-~~~sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
..+++++ .+++....++.|+++|+.++ .. .+.++.. ..... +.|+|||++|+ +...... ...|+
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~s~dg~~l~-~~~~~~~-----~~~i~ 111 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLE-PPKVVAIQEG-----QSSMADVDITPDDQFAV-TVTGLNH-----PFNMQ 111 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSS-SCEEEEEEEC-----SSCCCCEEECTTSSEEE-ECCCSSS-----SCEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCC-ceeEEecccC-----CCCccceEECCCCCEEE-EecCCCC-----cccEE
Confidence 3455554 57777776788999999877 22 3344432 12234 78999999988 4332211 13799
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceee--eEEEcCCCCCcccc
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK--RVCVAGFDPTIVES 302 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~--~~~~~~~~~~~~~~ 302 (623)
++|+++++ ...............|||||++|++..... ...|++++++..+.+.. ...+.. . ..
T Consensus 112 v~d~~~~~---~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~-~----~~ 177 (331)
T 3u4y_A 112 SYSFLKNK---FISTIPIPYDAVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISG-G----TR 177 (331)
T ss_dssp EEETTTTE---EEEEEECCTTEEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECS-S----SS
T ss_pred EEECCCCC---eEEEEECCCCccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccccC-C----CC
Confidence 99999886 333322223345688999999988775432 22377777776543211 222222 2 34
Q ss_pred CcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeE---EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 303 PTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 303 ~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
+..+.|+|||+.+|++.. +...|..+|+.+++. ....+...... .+.+. |+++.+|++.. +
T Consensus 178 ~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~---------~~~~s---pdg~~l~v~~~--~ 241 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPG---------TIVVS---RDGSTVYVLTE--S 241 (331)
T ss_dssp EEEEEECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCC---------CEEEC---TTSSEEEEECS--S
T ss_pred ccceEECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCc---------eEEEC---CCCCEEEEEEc--C
Confidence 567899999994455554 234577788877764 22222221122 23333 38887777653 4
Q ss_pred eEEEEEEeCCCCceeeccc---C-----Ccce--E--eeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 380 RSYLGILDDFGHSLSLLDI---P-----FTDI--D--NITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 380 ~~~L~~~d~~~~~~~~lt~---~-----~~~v--~--~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
...|+++|+++++++.+.. . .... . .++++++++++.... ...+.++++++..
T Consensus 242 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI---SRELKVFTISGKV 306 (331)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCE
T ss_pred CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC---CCcEEEEEecCCc
Confidence 5668899999887743321 1 1111 1 337778877766542 2467778876654
No 79
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.46 E-value=1.9e-13 Score=140.55 Aligned_cols=133 Identities=17% Similarity=0.094 Sum_probs=100.1
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc---CCHHhHHHH-cCceEEEEECCCCCC
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI---LNLSIQYWT-SRGWAFVDVNYGGST 536 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~---~~~~~~~~a-~~G~~v~~~d~rGs~ 536 (623)
.+.+.+.. +..+.+.+|.|++.. . ++++.|+||++|||+....... |...+..|+ ++||.|+.+||||.+
T Consensus 55 ~~~v~~~~---~~~~~~~~~~P~~~~-~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~ 128 (338)
T 2o7r_A 55 TKDLALNP---LHNTFVRLFLPRHAL-Y--NSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAP 128 (338)
T ss_dssp EEEEEEET---TTTEEEEEEEEGGGG-G--SSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred EEEEEecC---CCCeEEEEEeCCCCC-c--CCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCC
Confidence 45566654 445777778886520 0 1467899999999864333222 556677888 789999999999966
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCC------CCCCCceEEEEcChHHHHHHHHh-cCCC--------ceeEE
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG------KADEKRLCITGGSAGGYTTLAAL-AFRD--------TFKAG 601 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~------~~d~~rv~i~G~S~GG~~~~~~~-~~~~--------~f~a~ 601 (623)
++.. ...++|+.++++|+.++. .+|++||+|+|+|+||++++.++ ++++ +++++
T Consensus 129 ~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~ 197 (338)
T 2o7r_A 129 EHRL-----------PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGL 197 (338)
T ss_dssp TTCT-----------THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEE
T ss_pred CCCC-----------chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEE
Confidence 4321 234789999999999873 26789999999999999999998 7777 89999
Q ss_pred EecccCCCH
Q 006979 602 ASLYGVSIP 610 (623)
Q Consensus 602 v~~~g~~d~ 610 (623)
|..+|..+.
T Consensus 198 vl~~p~~~~ 206 (338)
T 2o7r_A 198 VLDEPGFGG 206 (338)
T ss_dssp EEESCCCCC
T ss_pred EEECCccCC
Confidence 999998764
No 80
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.46 E-value=1.5e-13 Score=142.82 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=103.7
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccC--cCCHHhHHHHcCceEEEEECCCCCCC
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARG--ILNLSIQYWTSRGWAFVDVNYGGSTG 537 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~--~~~~~~~~~a~~G~~v~~~d~rGs~~ 537 (623)
.+.+.++.. +|..+++++|.|.+. .++.|+||++|||+.. .... .+......|+++||+|+.+||||.++
T Consensus 82 ~~~~~~~~~-~g~~l~~~v~~p~~~------~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg 154 (361)
T 1jkm_A 82 TSTETILGV-DGNEITLHVFRPAGV------EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWT 154 (361)
T ss_dssp EEEEEEECT-TSCEEEEEEEEETTC------CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEE
T ss_pred eeeeeeecC-CCCeEEEEEEeCCCC------CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 456677776 777899999999762 2367999999998632 2222 34456888898999999999999864
Q ss_pred CchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-c-----CCCceeEEEecccCC
Q 006979 538 YGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-A-----FRDTFKAGASLYGVS 608 (623)
Q Consensus 538 ~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~-----~~~~f~a~v~~~g~~ 608 (623)
+.. ...+....+|+.++++|+.++. .+| ||+|+|+|+||++++.++ . +|+.++++|+.+|+.
T Consensus 155 ~~~-------~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~ 225 (361)
T 1jkm_A 155 AEG-------HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYI 225 (361)
T ss_dssp TTE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCC
T ss_pred CCC-------CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcc
Confidence 421 1223445799999999998862 244 999999999999999888 5 677999999999998
Q ss_pred CH
Q 006979 609 IP 610 (623)
Q Consensus 609 d~ 610 (623)
|.
T Consensus 226 ~~ 227 (361)
T 1jkm_A 226 SG 227 (361)
T ss_dssp CC
T ss_pred cc
Confidence 87
No 81
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.46 E-value=2.9e-13 Score=140.08 Aligned_cols=136 Identities=14% Similarity=0.124 Sum_probs=101.1
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCC----------CCCCCCCCCEEEEecCCCCCcccC-c--CCHHhHHHH-cCceE
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIY----------QASPEEKPPLLVKSHGGPTSEARG-I--LNLSIQYWT-SRGWA 526 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~----------~~~~~~~~Pliv~~hGg~~~~~~~-~--~~~~~~~~a-~~G~~ 526 (623)
.+.+.+.. +..+.+.+|.|++... .+..+++.|+||++|||+...... . |...+..|+ ++||.
T Consensus 72 ~~dv~~~~---~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~ 148 (351)
T 2zsh_A 72 SFDVLIDR---RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCV 148 (351)
T ss_dssp EEEEEEET---TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSE
T ss_pred EEEEEecC---CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCE
Confidence 34555543 4457788888876210 000146789999999986533222 2 556778888 78999
Q ss_pred EEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCC----CCCCC-ceEEEEcChHHHHHHHHh-cCCC---c
Q 006979 527 FVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG----KADEK-RLCITGGSAGGYTTLAAL-AFRD---T 597 (623)
Q Consensus 527 v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~----~~d~~-rv~i~G~S~GG~~~~~~~-~~~~---~ 597 (623)
|+.+||||.+++.. ...++|+.++++|+.++. .+|++ ||+|+|+|+||++++.++ .+++ .
T Consensus 149 vv~~d~rg~~~~~~-----------~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~ 217 (351)
T 2zsh_A 149 VVSVNYRRAPENPY-----------PCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID 217 (351)
T ss_dssp EEEECCCCTTTSCT-----------THHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCC
T ss_pred EEEecCCCCCCCCC-----------chhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCC
Confidence 99999999765321 234789999999999875 48999 999999999999999988 7777 8
Q ss_pred eeEEEecccCCCH
Q 006979 598 FKAGASLYGVSIP 610 (623)
Q Consensus 598 f~a~v~~~g~~d~ 610 (623)
++++|+.+|..+.
T Consensus 218 v~~~vl~~p~~~~ 230 (351)
T 2zsh_A 218 VLGNILLNPMFGG 230 (351)
T ss_dssp CCEEEEESCCCCC
T ss_pred eeEEEEECCccCC
Confidence 9999999998763
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.45 E-value=1.4e-11 Score=128.60 Aligned_cols=238 Identities=11% Similarity=0.040 Sum_probs=151.6
Q ss_pred eEEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 149 AFRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 149 ~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
+.+++++ .+++....++.|+++|+.++ .....+... .......|+|||++|++...+. ..|+++
T Consensus 36 ~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~~--------~~v~v~ 101 (391)
T 1l0q_A 36 GAVISPDGTKVYVANAHSNDVSIIDTATN-NVIATVPAG-----SSPQGVAVSPDGKQVYVTNMAS--------STLSVI 101 (391)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEETTTT-EEEEEEECS-----SSEEEEEECTTSSEEEEEETTT--------TEEEEE
T ss_pred eEEECCCCCEEEEECCCCCeEEEEECCCC-eEEEEEECC-----CCccceEECCCCCEEEEEECCC--------CEEEEE
Confidence 4555555 56677767788999999876 222333332 2456788999999988765432 569999
Q ss_pred EcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCc
Q 006979 227 ALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (623)
|+.+++ ...............|+|||++|++.... ...|+++|+.++. ....+... ..+..+
T Consensus 102 d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~~~d~~~~~---~~~~~~~~-----~~~~~~ 163 (391)
T 1l0q_A 102 DTTSNT---VAGTVKTGKSPLGLALSPDGKKLYVTNNG-------DKTVSVINTVTKA---VINTVSVG-----RSPKGI 163 (391)
T ss_dssp ETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEETT-------TTEEEEEETTTTE---EEEEEECC-----SSEEEE
T ss_pred ECCCCe---EEEEEeCCCCcceEEECCCCCEEEEEeCC-------CCEEEEEECCCCc---EEEEEecC-----CCcceE
Confidence 999886 43333333345668899999999777632 3469999988762 23333322 234678
Q ss_pred eeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 307 ~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
.|+|||+.++++.. +...|+.+|+.+++............. +.+. ++++.+++.........|+++
T Consensus 164 ~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~---------~~~~---~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 164 AVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAPSG---------IAVN---PEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSEEEE---------EEEC---TTSSEEEEEEECSSCCEEEEE
T ss_pred EECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCCCccc---------eEEC---CCCCEEEEEecCcCCCcEEEE
Confidence 99999995544443 224588889888875554433222222 2222 378888877754355678888
Q ss_pred eCCCCcee-ecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 387 DDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 387 d~~~~~~~-~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
|+.+++.. .+..+. .+..+ +++++.+++..... ..++++++.+++.
T Consensus 230 d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 230 DTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFX---NTVSVIDTATNTI 278 (391)
T ss_dssp ETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTT---TEEEEEETTTTEE
T ss_pred ECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCC---CEEEEEECCCCcE
Confidence 98877654 333332 33333 67777777765422 5788899888764
No 83
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.45 E-value=1.3e-13 Score=140.82 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=104.3
Q ss_pred CcEEEEeecCCCCe-EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHHc-CceEEEEECCCCCC
Q 006979 460 LPELIEFPTEVPGQ-KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTS-RGWAFVDVNYGGST 536 (623)
Q Consensus 460 ~~~~i~~~~~~dg~-~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a~-~G~~v~~~d~rGs~ 536 (623)
..+.+.+++. +|. .+.+++|.|.+. .++.|+||++|||++. .....+......|++ .||.|+.+||||.+
T Consensus 50 ~~~~~~i~~~-~g~~~l~~~~~~P~~~------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~ 122 (323)
T 1lzl_A 50 SLRELSAPGL-DGDPEVKIRFVTPDNT------AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAP 122 (323)
T ss_dssp EEEEEEECCS-TTCCCEEEEEEEESSC------CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTT
T ss_pred eEEEEEecCC-CCCceeEEEEEecCCC------CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCC
Confidence 4677888887 776 799999999751 3567999999998633 233345567777887 59999999999976
Q ss_pred CCchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCC----ceeEEEecccCC
Q 006979 537 GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRD----TFKAGASLYGVS 608 (623)
Q Consensus 537 ~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~----~f~a~v~~~g~~ 608 (623)
++.. ....+|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++ .++++|..+|+.
T Consensus 123 ~~~~-----------~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~ 191 (323)
T 1lzl_A 123 ETTF-----------PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPEL 191 (323)
T ss_dssp TSCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCC
T ss_pred CCCC-----------CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCcc
Confidence 5421 124789999999998752 37889999999999999999888 5544 599999999998
Q ss_pred CHH
Q 006979 609 IPV 611 (623)
Q Consensus 609 d~~ 611 (623)
|+.
T Consensus 192 ~~~ 194 (323)
T 1lzl_A 192 DDR 194 (323)
T ss_dssp CTT
T ss_pred CCC
Confidence 764
No 84
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.44 E-value=5.6e-14 Score=135.95 Aligned_cols=133 Identities=16% Similarity=0.167 Sum_probs=100.6
Q ss_pred EEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhH
Q 006979 463 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREF 542 (623)
Q Consensus 463 ~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~ 542 (623)
.+.+++. +|..++++++.|.+ ++.|+||++||.... ...+...++.|+++||.|+.+|+||.+..+...
T Consensus 5 ~~~~~~~-~g~~l~~~~~~p~~--------~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 73 (236)
T 1zi8_A 5 GISIQSY-DGHTFGALVGSPAK--------APAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTAL 73 (236)
T ss_dssp TCCEECT-TSCEECEEEECCSS--------CSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBC
T ss_pred eEEEecC-CCCeEEEEEECCCC--------CCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccc
Confidence 3556666 89999999998863 457999999998433 335667788899999999999999877654310
Q ss_pred -------HH----hhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 543 -------RE----RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 543 -------~~----~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.. ......-....+|+.++++++.++..++ +||+++|+|+||++++.++ .+| ++++++.+|...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~ 149 (236)
T 1zi8_A 74 DPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGL 149 (236)
T ss_dssp CTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSG
T ss_pred cccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCccc
Confidence 00 0011111234689999999999887665 6999999999999999999 667 999999998754
No 85
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.44 E-value=2.6e-13 Score=143.54 Aligned_cols=133 Identities=14% Similarity=0.056 Sum_probs=102.7
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.++. +|..++++++.|.+ +++.|+||++||.+... ...+......++++||.|+.+|+||.|...
T Consensus 167 ~~~~v~i~~--~g~~l~~~~~~P~~-------~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~ 236 (415)
T 3mve_A 167 IIKQLEIPF--EKGKITAHLHLTNT-------DKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPSVGYSS 236 (415)
T ss_dssp EEEEEEEEC--SSSEEEEEEEESCS-------SSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTTSGGGT
T ss_pred CeEEEEEEE--CCEEEEEEEEecCC-------CCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCCCCCCC
Confidence 456788877 58889999999976 56789999999984321 223334567888999999999999965432
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.. . ..........++++++.+.+.+|++||+|+|+|+||++++.++ .+|++++++|+.+|+.+
T Consensus 237 ~~---~----~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~ 300 (415)
T 3mve_A 237 KY---P----LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIH 300 (415)
T ss_dssp TS---C----CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCS
T ss_pred CC---C----CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccc
Confidence 21 1 1111223446788899998889999999999999999999999 68999999999999865
No 86
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.44 E-value=4.3e-11 Score=123.77 Aligned_cols=275 Identities=9% Similarity=0.022 Sum_probs=151.1
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCc
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~ 166 (623)
...+..+.++| ++.+|.......+.++..+|..+..+| +.+.+.... ........+++.++.+++.+..++.
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g-~~~~~~~~~------~~~~~p~~~~~dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG-TLHLLNTQK------TMGADPCYLTTNGKNIVTANYSGGS 121 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT-EEEEEEEEE------CSSSCEEEEEECSSEEEEEETTTTE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC-cEEEeeEec------cCCCCcEEEEECCCEEEEEECCCCE
Confidence 45567889999 777887765432346777787765422 222221100 0001122344434467777767788
Q ss_pred EEEEeCCCCCCCceecCC----C-CCC-----CCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC--CC---
Q 006979 167 LYKHSIDSKDSSPLPITP----D-YGE-----PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN--GQ--- 231 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~----~-~~~-----~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~--~g--- 231 (623)
+.+++++.. .....+.. . ... .........|||||++|++..... ..+++++++ ++
T Consensus 122 v~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--------~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 122 ITVFPIGQD-GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT--------DQIHKFNINPNANADN 192 (361)
T ss_dssp EEEEEBCTT-SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT--------TEEEEEEECTTCCTTT
T ss_pred EEEEEeCCC-CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC--------CEEEEEEEcCCCCccc
Confidence 999988643 12222211 0 000 011123478999999887765322 345555554 33
Q ss_pred -C-cccc---eec-ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 232 -N-IQEP---KVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 232 -~-~~~~---~~l-~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+ .... ..+ ...........|||||++|++.... ...|.+++++++ .+.....+.... ........
T Consensus 193 ~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-------~~~v~v~~~~~g-~~~~~~~~~~~~-~~~~~~~~ 263 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-------GGTVIAFRYADG-MLDEIQTVAADT-VNAQGSGD 263 (361)
T ss_dssp CCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-------TCEEEEEEEETT-EEEEEEEEESCS-SCCCCEEE
T ss_pred ccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-------CCeEEEEEecCC-ceEEeEEEecCC-CCCCCccc
Confidence 1 1000 111 1222223457899999988776522 335888888754 211122222111 00023457
Q ss_pred ceeCCCCcEEEEEeCC-CCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 306 PKWSSKGELFFVTDRK-NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~-~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
+.|+|||+.+|++++. .+.-.+|.+++.+++.+.+..... +. ....+.|. |+++.|++....++.-.+|
T Consensus 264 i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~-----~~~~~~~s---pdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 264 IHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GI-----HPRNFIIT---PNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SS-----CCCEEEEC---TTSCEEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CC-----CCceEEEC---CCCCEEEEEECCCCCEEEE
Confidence 8999999966677763 355667777666777665543211 10 11233343 3888888877677888899
Q ss_pred EEeCCCCceeecc
Q 006979 385 ILDDFGHSLSLLD 397 (623)
Q Consensus 385 ~~d~~~~~~~~lt 397 (623)
.+|.++++++.+.
T Consensus 334 ~~d~~~g~~~~~~ 346 (361)
T 3scy_A 334 ERDQATGLLTDIK 346 (361)
T ss_dssp EECTTTCCEEECS
T ss_pred EEECCCCcEeecc
Confidence 9999999887664
No 87
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.44 E-value=1.6e-13 Score=137.46 Aligned_cols=129 Identities=16% Similarity=0.102 Sum_probs=101.1
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCch
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 540 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~ 540 (623)
.+.+.++. +|..+.++++.|. +.|+||++||++. ....+...+..|+++||.|+.+|+||.|.+..
T Consensus 6 ~~~~~~~~--~g~~l~~~~~~p~----------~~p~vv~~HG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~ 71 (290)
T 3ksr_A 6 LSSIEIPV--GQDELSGTLLTPT----------GMPGVLFVHGWGG--SQHHSLVRAREAVGLGCICMTFDLRGHEGYAS 71 (290)
T ss_dssp EEEEEEEE--TTEEEEEEEEEEE----------SEEEEEEECCTTC--CTTTTHHHHHHHHTTTCEEECCCCTTSGGGGG
T ss_pred eeeEEecC--CCeEEEEEEecCC----------CCcEEEEeCCCCC--CcCcHHHHHHHHHHCCCEEEEeecCCCCCCCC
Confidence 45677776 6889999999884 3589999999954 34466778899999999999999999765543
Q ss_pred hHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 541 EFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 541 ~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
... ........+|+.++++++.+++.+|+++|+|+|||+||++++.++ .+| +++++..+|..+
T Consensus 72 ~~~----~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~ 135 (290)
T 3ksr_A 72 MRQ----SVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALY 135 (290)
T ss_dssp GTT----TCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCC
T ss_pred Ccc----cccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchh
Confidence 211 011123468999999999999889999999999999999999999 666 677777777654
No 88
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.44 E-value=6.5e-13 Score=131.71 Aligned_cols=139 Identities=17% Similarity=0.128 Sum_probs=98.8
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc-----CCHHhHHHHcC----ceEEEE
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-----LNLSIQYWTSR----GWAFVD 529 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~-----~~~~~~~~a~~----G~~v~~ 529 (623)
.+.+.+.+.+..+|..+.+++|.|.+ ++. ++++|+||++||++....... +...++.|+++ ||+|+.
T Consensus 30 g~~~~~~~~s~~~~~~~~~~v~~P~~--~~~--~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~ 105 (268)
T 1jjf_A 30 GQVVNISYFSTATNSTRPARVYLPPG--YSK--DKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVT 105 (268)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTT--CCT--TSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEE
T ss_pred ceEEEEEEeccccCCceEEEEEeCCC--CCC--CCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEE
Confidence 34566777764357889999999987 433 577899999999864332111 11236667776 599999
Q ss_pred ECCCCCCCC-chhHHHhhccCCccchHHH-HHHHHHHHHhCCCC--CCCceEEEEcChHHHHHHHHh-cCCCceeEEEec
Q 006979 530 VNYGGSTGY-GREFRERLLGRWGIVDVND-CCSCATFLVGSGKA--DEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASL 604 (623)
Q Consensus 530 ~d~rGs~~~-g~~~~~~~~~~~g~~~~~D-~~~~~~~l~~~~~~--d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~ 604 (623)
+|+++.+.. ...+. ...+| +.++++++.++..+ |++||+|+|+|+||++++.++ .+|++|+++++.
T Consensus 106 ~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 176 (268)
T 1jjf_A 106 PNTNAAGPGIADGYE---------NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPI 176 (268)
T ss_dssp ECCCCCCTTCSCHHH---------HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEE
T ss_pred eCCCCCCccccccHH---------HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEe
Confidence 999985431 11111 11233 45667777765444 899999999999999999998 889999999999
Q ss_pred ccCCCH
Q 006979 605 YGVSIP 610 (623)
Q Consensus 605 ~g~~d~ 610 (623)
+|..++
T Consensus 177 s~~~~~ 182 (268)
T 1jjf_A 177 SAAPNT 182 (268)
T ss_dssp SCCTTS
T ss_pred CCCCCC
Confidence 998764
No 89
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.44 E-value=9.3e-13 Score=129.88 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=99.1
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCC-CcccCcCCHHhHHHHcCceEEEEECCCCCCCCch
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPT-SEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 540 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~-~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~ 540 (623)
+...++.. ++..+...+|.|.+ ++.|+||++|||++ ......+...++.|+++||.|+.+|+||++.+..
T Consensus 39 ~~~~i~~~-~~~~~~~~~~~p~~--------~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~ 109 (262)
T 2pbl_A 39 ARLNLSYG-EGDRHKFDLFLPEG--------TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRI 109 (262)
T ss_dssp EEEEEESS-SSTTCEEEEECCSS--------SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCH
T ss_pred CccccccC-CCCCceEEEEccCC--------CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCCh
Confidence 34444443 45556677787753 45689999999853 2344466778889999999999999999764321
Q ss_pred hHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC------CCceeEEEecccCCCHHHh
Q 006979 541 EFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF------RDTFKAGASLYGVSIPVII 613 (623)
Q Consensus 541 ~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~------~~~f~a~v~~~g~~d~~~~ 613 (623)
....+|+.++++++.++.. ++|+|+|||+||++++.++ .+ +++++++|..+|+.|+..+
T Consensus 110 -----------~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~ 175 (262)
T 2pbl_A 110 -----------SEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL 175 (262)
T ss_dssp -----------HHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG
T ss_pred -----------HHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHH
Confidence 1237899999999988643 7999999999999999999 55 8899999999999887544
No 90
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.41 E-value=9.9e-13 Score=134.85 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=102.7
Q ss_pred EeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHH
Q 006979 465 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRE 544 (623)
Q Consensus 465 ~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~ 544 (623)
.+... +|..++++++.|.+ ++.|+||++||.+.. ...|...+..|+++||.|+.+|+||.|.....
T Consensus 39 ~~~~~-dg~~l~~~~~~p~~--------~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~--- 104 (342)
T 3hju_A 39 HLVNA-DGQYLFCRYWKPTG--------TPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEGE--- 104 (342)
T ss_dssp EEECT-TSCEEEEEEECCSS--------CCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTTSTTSCSS---
T ss_pred eEEcc-CCeEEEEEEeCCCC--------CCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCCCcCCCCc---
Confidence 56666 89999999998864 446899999999543 33677788999999999999999997665432
Q ss_pred hhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 545 RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 545 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
......-....+|+.++++++..+ .+.++|+|+|+|+||++++.++ .+|++++++|..+|..+.
T Consensus 105 ~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 169 (342)
T 3hju_A 105 RMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 169 (342)
T ss_dssp TTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSC
T ss_pred CCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECccccc
Confidence 111111123478999999999877 4567999999999999999999 899999999999998654
No 91
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.41 E-value=4.2e-13 Score=136.36 Aligned_cols=129 Identities=21% Similarity=0.231 Sum_probs=100.5
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCC-cccCcCCHHhHHHH-cCceEEEEECCCCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWT-SRGWAFVDVNYGGSTG 537 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~-~~~~~~~~~~~~~a-~~G~~v~~~d~rGs~~ 537 (623)
..+.+.++.. +| .+.+++| + . .++.|+||++|||++. .....+......|+ +.||.|+.+||||.+.
T Consensus 55 ~~~~~~i~~~-~g-~i~~~~y-~-~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~ 123 (311)
T 1jji_A 55 RVEDRTIKGR-NG-DIRVRVY-Q-Q-------KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPE 123 (311)
T ss_dssp EEEEEEEEET-TE-EEEEEEE-E-S-------SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTT
T ss_pred eEEEEEecCC-CC-cEEEEEE-c-C-------CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCC
Confidence 5678888886 66 7888888 3 2 3457999999999632 22334566778888 6899999999999765
Q ss_pred CchhHHHhhccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cCCCc----eeEEEecccCCC
Q 006979 538 YGREFRERLLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AFRDT----FKAGASLYGVSI 609 (623)
Q Consensus 538 ~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~~~~----f~a~v~~~g~~d 609 (623)
+.. ....+|+.++++|+.++. .+|++||+|+|+|+||++++.++ .+++. ++++|..+|..|
T Consensus 124 ~~~-----------p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (311)
T 1jji_A 124 HKF-----------PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp SCT-----------THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred CCC-----------CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccC
Confidence 422 224689999999998762 37888999999999999999888 55554 999999999987
Q ss_pred H
Q 006979 610 P 610 (623)
Q Consensus 610 ~ 610 (623)
+
T Consensus 193 ~ 193 (311)
T 1jji_A 193 F 193 (311)
T ss_dssp S
T ss_pred C
Confidence 5
No 92
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.41 E-value=1.2e-12 Score=131.96 Aligned_cols=138 Identities=16% Similarity=0.085 Sum_probs=96.8
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-----cCCHHhHHHHcC----ceEEEE
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----ILNLSIQYWTSR----GWAFVD 529 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-----~~~~~~~~~a~~----G~~v~~ 529 (623)
.+.+.+++.+. ++ .+.+++|.|.+ |++ ++++|+||++||++...... .+...++.++++ ||+|+.
T Consensus 39 g~~~~~~~~s~-~~-~~~~~vy~P~~--~~~--~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~ 112 (297)
T 1gkl_A 39 GRIVKETYTGI-NG-TKSLNVYLPYG--YDP--NKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVT 112 (297)
T ss_dssp CEEEEEEEEET-TE-EEEEEEEECTT--CCT--TSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEE
T ss_pred ceEEEEEEEcC-CC-EEEEEEEeCCC--CCC--CCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEE
Confidence 45667888886 54 89999999987 543 57899999999986533211 112345666666 599999
Q ss_pred ECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCC---------CCCCCceEEEEcChHHHHHHHHh-cCCCcee
Q 006979 530 VNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG---------KADEKRLCITGGSAGGYTTLAAL-AFRDTFK 599 (623)
Q Consensus 530 ~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~---------~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~ 599 (623)
+|++|+.+.+..|.+ ...+|+...++...... ..|+++++|+|+||||++++.++ .+|++|+
T Consensus 113 pd~~~~~~~~~~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~ 184 (297)
T 1gkl_A 113 PTFNGGNCTAQNFYQ--------EFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVA 184 (297)
T ss_dssp CCSCSTTCCTTTHHH--------HHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCC
T ss_pred ecCcCCccchHHHHH--------HHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhh
Confidence 999986544433321 11234444444332221 14778999999999999999998 8899999
Q ss_pred EEEecccCCCH
Q 006979 600 AGASLYGVSIP 610 (623)
Q Consensus 600 a~v~~~g~~d~ 610 (623)
++++++|...+
T Consensus 185 ~~v~~sg~~~~ 195 (297)
T 1gkl_A 185 YFMPLSGDYWY 195 (297)
T ss_dssp EEEEESCCCCB
T ss_pred eeeEecccccc
Confidence 99999998643
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.40 E-value=7.4e-11 Score=124.90 Aligned_cols=293 Identities=8% Similarity=-0.029 Sum_probs=167.0
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcE
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l 167 (623)
..+..+.++|++.++..... ++...+|. ..++ +....++... .. .+.....+..++++ .++++...++.|
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~---~~~i~~~d--~~~g-~~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLE---DEGMDVLD--INSG-QTVRLSPPEK-YK--KKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTT---SSSEEEEE--TTTC-CEEEECCCHH-HH--TTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred CCceEEEEeCCCeEEEEeCC---CCeEEEEE--CCCC-eEeeecCccc-cc--ccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 34457888885556655433 35544554 3322 3333332210 00 00101223445444 778887778889
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCccc
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYA 247 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~ 247 (623)
+++|++++ .....+... ........|+|+|+++++..... ..|+++|+.+++ ............
T Consensus 194 ~~~d~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~--------~~i~~~d~~~~~---~~~~~~~~~~~~ 257 (433)
T 3bws_A 194 HVFDLKTL-AYKATVDLT----GKWSKILLYDPIRDLVYCSNWIS--------EDISVIDRKTKL---EIRKTDKIGLPR 257 (433)
T ss_dssp EEEETTTC-CEEEEEECS----SSSEEEEEEETTTTEEEEEETTT--------TEEEEEETTTTE---EEEECCCCSEEE
T ss_pred EEEECCCc-eEEEEEcCC----CCCeeEEEEcCCCCEEEEEecCC--------CcEEEEECCCCc---EEEEecCCCCce
Confidence 99999876 223334322 23455678999999887765322 569999998876 333333333455
Q ss_pred ceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeee
Q 006979 248 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN 326 (623)
Q Consensus 248 ~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~ 326 (623)
...|+|||++|+........+......|+++|+.++. ....+ ... ..+..+.|+|||+ +++.... ++ .
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~~~~~-~~~----~~~~~~~~~~~g~~l~~~~~~-~~--~ 326 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---LIDTI-GPP----GNKRHIVSGNTENKIYVSDMC-CS--K 326 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---EEEEE-EEE----ECEEEEEECSSTTEEEEEETT-TT--E
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---EEeec-cCC----CCcceEEECCCCCEEEEEecC-CC--E
Confidence 6789999999988775433221124579999998762 22222 111 2345789999998 5544333 33 6
Q ss_pred EEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCe------------EEEEEEeCCCCcee
Q 006979 327 LHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR------------SYLGILDDFGHSLS 394 (623)
Q Consensus 327 L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~------------~~L~~~d~~~~~~~ 394 (623)
|..+|+.+++.....+.........|. |+++.+++.....+. ..|+++|+.+++..
T Consensus 327 v~v~d~~~~~~~~~~~~~~~~~~~~~s------------~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIPVFDKPNTIALS------------PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEEC------------TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred EEEEECCCCcEEEEecCCCCCCeEEEc------------CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 777888887755444332222222332 377777777654332 27899999887765
Q ss_pred ecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 395 LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 395 ~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
........+..+ +++++.+++..... ..|+.++++
T Consensus 395 ~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~~ 431 (433)
T 3bws_A 395 EFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRRD 431 (433)
T ss_dssp EEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEET
T ss_pred EEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEec
Confidence 433333334444 66676665544311 355555543
No 94
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.40 E-value=4.3e-13 Score=139.35 Aligned_cols=151 Identities=17% Similarity=0.074 Sum_probs=101.8
Q ss_pred CcEEEEeecC-CCC--eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcc-cCcC-----CHHhHHHH-cCceEEEE
Q 006979 460 LPELIEFPTE-VPG--QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGIL-----NLSIQYWT-SRGWAFVD 529 (623)
Q Consensus 460 ~~~~i~~~~~-~dg--~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~-~~~~-----~~~~~~~a-~~G~~v~~ 529 (623)
+..+|.|.+. .+| ..+.++++.|.+. .++.|+|++.||...... .+.+ ...+..|+ ++||+|++
T Consensus 42 ~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~------~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~ 115 (377)
T 4ezi_A 42 QLYKINYKTQSPDGNLTIASGLVAMPIHP------VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVM 115 (377)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEESSC------SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEECCCC------CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEE
Confidence 4567888776 134 4578999999872 367899999999863211 1111 13466788 99999999
Q ss_pred ECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHH-hCCCCCCCceEEEEcChHHHHHHHHh-cC----CC-ceeEEE
Q 006979 530 VNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLV-GSGKADEKRLCITGGSAGGYTTLAAL-AF----RD-TFKAGA 602 (623)
Q Consensus 530 ~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~-~~~~~d~~rv~i~G~S~GG~~~~~~~-~~----~~-~f~a~v 602 (623)
+||||.|+.+........+.....++.|.+.++..+. ..+..+.+||+++|||+||+++++++ .+ |+ .+++++
T Consensus 116 ~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~ 195 (377)
T 4ezi_A 116 PDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVA 195 (377)
T ss_dssp ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEE
T ss_pred eCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEE
Confidence 9999988766411100001111223445444444443 34655789999999999999999888 43 33 689999
Q ss_pred ecccCCCHHHhhhh
Q 006979 603 SLYGVSIPVIISEE 616 (623)
Q Consensus 603 ~~~g~~d~~~~~~~ 616 (623)
+.+++.|+....+.
T Consensus 196 ~~~~p~dl~~~~~~ 209 (377)
T 4ezi_A 196 PGSAPYGWEETMHF 209 (377)
T ss_dssp EESCCCCHHHHHHH
T ss_pred ecCcccCHHHHHHH
Confidence 99999999876543
No 95
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.39 E-value=4.8e-13 Score=133.47 Aligned_cols=153 Identities=13% Similarity=0.011 Sum_probs=104.1
Q ss_pred CCCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHH-HHcCc---eEEEEEC
Q 006979 456 SYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQY-WTSRG---WAFVDVN 531 (623)
Q Consensus 456 ~~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~-~a~~G---~~v~~~d 531 (623)
..++..+.+++.+...|..+..++|.|++ |++ ++++|+|+++||++.......+...... .+++| ++|+.+|
T Consensus 13 ~~~~~~~~~~~~s~~~g~~~~~~v~~P~~--~~~--~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~ 88 (275)
T 2qm0_A 13 IITSNTEQWKMYSKLEGKEYQIHISKPKQ--PAP--DSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVG 88 (275)
T ss_dssp CCCTTEEEEEEECTTTCCEEEEEEECCSS--CCC--TTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEE
T ss_pred eecCCceEEEEEecCCCCEEEEEEECCCC--CCC--CCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEEC
Confidence 45677888888875358899999999987 543 5789999999998531111111111122 23467 9999999
Q ss_pred CCCCCCCchhHHHhhcc------------------C-CccchHHHHH--HHHHHHHhCCCCCCCceEEEEcChHHHHHHH
Q 006979 532 YGGSTGYGREFRERLLG------------------R-WGIVDVNDCC--SCATFLVGSGKADEKRLCITGGSAGGYTTLA 590 (623)
Q Consensus 532 ~rGs~~~g~~~~~~~~~------------------~-~g~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~ 590 (623)
++++..++..-+..... . .+...+.|.+ ..+.++.++..+|++|++|+|+|+||++++.
T Consensus 89 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~ 168 (275)
T 2qm0_A 89 YPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALH 168 (275)
T ss_dssp CSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHH
T ss_pred CCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHH
Confidence 99865543321111011 0 1111333432 4455666665689999999999999999999
Q ss_pred Hh-cCCCceeEEEecccCCCHHH
Q 006979 591 AL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 591 ~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
++ .+|+.|+++++.+|..++..
T Consensus 169 ~~~~~p~~f~~~~~~s~~~~~~~ 191 (275)
T 2qm0_A 169 ILFTNLNAFQNYFISSPSIWWNN 191 (275)
T ss_dssp HHHHCGGGCSEEEEESCCTTHHH
T ss_pred HHHhCchhhceeEEeCceeeeCh
Confidence 98 88999999999999987643
No 96
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.39 E-value=4.2e-13 Score=133.56 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=99.0
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH---HhHHHHcCceEEEEECCCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGST 536 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~---~~~~~a~~G~~v~~~d~rGs~ 536 (623)
..+.+.+.+...|..+...+|.|++. . ++++|+||++||++.... .+.. ..+++.++||+|+.+|+||.|
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~--~---~~~~p~vv~lHG~~~~~~--~~~~~~~~~~~~~~~g~~vv~~d~~g~G 86 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKA--I---HEPCPVVWYLSGLTCTHA--NVMEKGEYRRMASELGLVVVCPDTSPRG 86 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGG--G---TSCEEEEEEECCTTCCSH--HHHHHSCCHHHHHHHTCEEEECCSSCCS
T ss_pred cEEEEEEeccccCCcceEEEEcCCCC--C---CCCCCEEEEEcCCCCCcc--chhhcccHHHHHhhCCeEEEecCCcccC
Confidence 34556665543688999999999762 1 467899999999854332 2222 345556679999999999865
Q ss_pred CCchh----H---------HHhhccCC-ccchHHHH-H-HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCcee
Q 006979 537 GYGRE----F---------RERLLGRW-GIVDVNDC-C-SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFK 599 (623)
Q Consensus 537 ~~g~~----~---------~~~~~~~~-g~~~~~D~-~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~ 599 (623)
..... | .......+ +.....+. . ++++++.++..+|++||+|+|+|+||++++.++ .+|++|+
T Consensus 87 ~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~ 166 (278)
T 3e4d_A 87 NDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFK 166 (278)
T ss_dssp TTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCS
T ss_pred cccccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccc
Confidence 43211 1 10000001 11122232 2 466777766568889999999999999999998 8899999
Q ss_pred EEEecccCCCHH
Q 006979 600 AGASLYGVSIPV 611 (623)
Q Consensus 600 a~v~~~g~~d~~ 611 (623)
++|+.+|+.++.
T Consensus 167 ~~v~~~~~~~~~ 178 (278)
T 3e4d_A 167 SCSAFAPIVAPS 178 (278)
T ss_dssp CEEEESCCSCGG
T ss_pred eEEEeCCccccc
Confidence 999999998754
No 97
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.38 E-value=1e-10 Score=120.20 Aligned_cols=265 Identities=10% Similarity=0.083 Sum_probs=138.9
Q ss_pred eEEEeCC-EEEEEeCC--CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 149 AFRIFGD-TVIFSNYK--DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~--~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
..++++| ++++.... ++.|++++++++ ..+++.... .........+|||||++|++..... ..+.+
T Consensus 44 ~~a~spdg~l~~~~~~~~~~~v~~~~~~~g--~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v 112 (347)
T 3hfq_A 44 YLALSAKDCLYSVDKEDDEGGIAAWQIDGQ--TAHKLNTVV-APGTPPAYVAVDEARQLVYSANYHK--------GTAEV 112 (347)
T ss_dssp CEEECTTCEEEEEEEETTEEEEEEEEEETT--EEEEEEEEE-EESCCCSEEEEETTTTEEEEEETTT--------TEEEE
T ss_pred eEEEccCCeEEEEEecCCCceEEEEEecCC--cEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCCC--------CEEEE
Confidence 4566655 56665542 467999999766 444444310 0012345678999999887765422 44666
Q ss_pred EEcC-CCCcccceeccc-CC--------CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCC
Q 006979 226 IALN-GQNIQEPKVLVS-GS--------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF 295 (623)
Q Consensus 226 idl~-~g~~~~~~~l~~-~~--------~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~ 295 (623)
++++ ++....+..+.. +. .......|||||+ |+..... ...|++++++..+.+.........
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~-------~~~v~~~~~~~~g~~~~~~~~~~~ 184 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG-------SDKVYVYNVSDAGQLSEQSVLTME 184 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT-------TTEEEEEEECTTSCEEEEEEEECC
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC-------CCEEEEEEECCCCcEEEeeeEEcC
Confidence 6664 343111122211 11 1133468999999 6554322 336888898844432222111111
Q ss_pred CCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEE
Q 006979 296 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (623)
Q Consensus 296 ~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~ 375 (623)
. . ..+..+.|+|||+.+|+++...+.-.+|.++..+++.+.+...........-......+.+ +|+++.||++.
T Consensus 185 ~-g--~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~---spdG~~l~v~~ 258 (347)
T 3hfq_A 185 A-G--FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL---SHDGHFLYVSN 258 (347)
T ss_dssp T-T--CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE---CTTSCEEEEEE
T ss_pred C-C--CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE---CCCCCEEEEEe
Confidence 1 1 2345679999999444444425666677777656765544321100000000001122333 34888888877
Q ss_pred EECCeEEEEEEeCCCCceeec---ccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcceeee
Q 006979 376 RQNGRSYLGILDDFGHSLSLL---DIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 440 (623)
Q Consensus 376 ~~~g~~~L~~~d~~~~~~~~l---t~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~lt 440 (623)
..++.-.+|.++.+ +..+.+ .........+ +++++.+++... ....-.+|.++.++++++.+.
T Consensus 259 ~~~~~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 259 RGYNTLAVFAVTAD-GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ-NTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ETTTEEEEEEECGG-GCEEEEEEEECSSSCCCEEEECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEEEECCC-CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc-CCCcEEEEEEeCCCCeEEecc
Confidence 66666666666533 344333 2211122233 777777766543 333345777787888765543
No 98
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.38 E-value=2.2e-12 Score=130.54 Aligned_cols=139 Identities=15% Similarity=0.075 Sum_probs=97.8
Q ss_pred EEEee---cCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcC-CHHhHHHHcCceEEEEECCCCCCCC
Q 006979 463 LIEFP---TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTSRGWAFVDVNYGGSTGY 538 (623)
Q Consensus 463 ~i~~~---~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~-~~~~~~~a~~G~~v~~~d~rGs~~~ 538 (623)
.+.|. .. +|..+.+++|.|.+. .++.|+||++||++... ..+ ....+.++++||.|+.+|+|+.+..
T Consensus 26 ~~~~~~~~~~-~~~~l~~~~~~P~~~------~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p 96 (304)
T 3d0k_A 26 AIPYLDDDRN-ADRPFTLNTYRPYGY------TPDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWP 96 (304)
T ss_dssp EEEECC---C-TTCCEEEEEEECTTC------CTTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSC
T ss_pred eEEecccCCC-CCceEEEEEEeCCCC------CCCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCC
Confidence 45565 44 788899999999762 24579999999995443 233 4557788899999999999964211
Q ss_pred chhHHH-------h-hccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC-ceeEEEecc-cC
Q 006979 539 GREFRE-------R-LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD-TFKAGASLY-GV 607 (623)
Q Consensus 539 g~~~~~-------~-~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~-~f~a~v~~~-g~ 607 (623)
+..+.. . .........++|+.++++++.++..+|++||+|+|||+||++++.++ .+|+ .++++|... |.
T Consensus 97 ~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 97 GVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp HHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred CccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 000000 0 00012234467899999999998778999999999999999999998 7884 778777444 66
Q ss_pred CCH
Q 006979 608 SIP 610 (623)
Q Consensus 608 ~d~ 610 (623)
.++
T Consensus 177 ~~~ 179 (304)
T 3d0k_A 177 YTL 179 (304)
T ss_dssp CCC
T ss_pred ccc
Confidence 544
No 99
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.38 E-value=2e-11 Score=123.03 Aligned_cols=253 Identities=8% Similarity=0.030 Sum_probs=145.7
Q ss_pred HHHHhccCCcc-CceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EE
Q 006979 81 ADVVSGASKRL-GGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TV 157 (623)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l 157 (623)
++.+.+....+ +++.|+| ++.+||++... + .|++++..++ +. .....+ .....++++++ .+
T Consensus 4 ~~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~---~--~i~~~d~~~~-~~-~~~~~~---------~~~~~i~~~~dG~l 67 (297)
T 3g4e_A 4 IECVLPENCRCGESPVWEEVSNSLLFVDIPA---K--KVCRWDSFTK-QV-QRVTMD---------APVSSVALRQSGGY 67 (297)
T ss_dssp EEEEECCCCSBEEEEEEETTTTEEEEEETTT---T--EEEEEETTTC-CE-EEEECS---------SCEEEEEEBTTSSE
T ss_pred EEEEeccCCccccCCeEECCCCEEEEEECCC---C--EEEEEECCCC-cE-EEEeCC---------CceEEEEECCCCCE
Confidence 34455555555 7899999 89999999663 3 3777776632 22 211111 01334556555 45
Q ss_pred EEEeCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCCCCCEEEEEEeccCC--CCCCceeEEEEEEcCCCCcc
Q 006979 158 IFSNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPRFNRYVTVREDRRQ--DALNSTTEIVAIALNGQNIQ 234 (623)
Q Consensus 158 ~f~~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sPdG~~l~~v~~~~~~--~~~~~~~~L~~idl~~g~~~ 234 (623)
++.. .+.|+++|++++ ..+.+... .+.+..+.++..++|+|+.++..+..... ........||+++.++ +
T Consensus 68 ~v~~--~~~l~~~d~~~g--~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~-- 140 (297)
T 3g4e_A 68 VATI--GTKFCALNWKEQ--SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-H-- 140 (297)
T ss_dssp EEEE--TTEEEEEETTTT--EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-C--
T ss_pred EEEE--CCeEEEEECCCC--cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-C--
Confidence 5543 456999999876 55554432 12234678899999999855544332211 0011347899999864 3
Q ss_pred cceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEec-CCCceeeeEEEcCCCCCccccCcCceeCCCCc
Q 006979 235 EPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (623)
Q Consensus 235 ~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~ 313 (623)
...+..+....+...|||||++|++.... ...|++++++ ..+.+...+++.... .....+....+++||.
T Consensus 141 -~~~~~~~~~~pngi~~spdg~~lyv~~~~-------~~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 141 -VKKYFDQVDISNGLDWSLDHKIFYYIDSL-------SYSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGK 211 (297)
T ss_dssp -EEEEEEEESBEEEEEECTTSCEEEEEEGG-------GTEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSC
T ss_pred -EEEEeeccccccceEEcCCCCEEEEecCC-------CCcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCC
Confidence 44444444455678899999999887633 3469999985 333333334433221 0013456778899996
Q ss_pred EEEEEeCCCCeeeEEEEecCCCeEEEEeecc-cccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLD-AEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~-~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
+++ +.. +...|+++|+++++........ .... ...|- .++++.||+++.+.+
T Consensus 212 lwv-a~~--~~~~v~~~d~~tG~~~~~i~~p~~~~t---------~~~f~--g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 212 LWV-ACY--NGGRVIRLDPVTGKRLQTVKLPVDKTT---------SCCFG--GKNYSEMYVTCARDG 264 (297)
T ss_dssp EEE-EEE--TTTEEEEECTTTCCEEEEEECSSSBEE---------EEEEE--SGGGCEEEEEEBCTT
T ss_pred EEE-EEc--CCCEEEEEcCCCceEEEEEECCCCCce---------EEEEe--CCCCCEEEEEcCCcC
Confidence 554 443 2246999999877654333221 1111 12222 026678888876544
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.37 E-value=8.3e-11 Score=122.72 Aligned_cols=232 Identities=12% Similarity=0.075 Sum_probs=146.2
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.++++...++.|+++|+.++ .....+.. ........|+|||++|++..... ..|+++|+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~-~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~d--------~~i~v~d~~~~~--- 65 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN-KVTATIPV-----GSNPMGAVISPDGTKVYVANAHS--------NDVSIIDTATNN--- 65 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT-EEEEEEEC-----SSSEEEEEECTTSSEEEEEEGGG--------TEEEEEETTTTE---
T ss_pred EEEEEcCCCCEEEEEECCCC-eEEEEeec-----CCCcceEEECCCCCEEEEECCCC--------CeEEEEECCCCe---
Confidence 46667777888999999876 22233332 22346788999999887765432 579999998887
Q ss_pred ceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEE
Q 006979 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELF 315 (623)
Q Consensus 236 ~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~ 315 (623)
..............+|||||++|++...+ ...|+++|+.++. ....+.. . ..+..+.|+|||+.+
T Consensus 66 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~-------~~~v~v~d~~~~~---~~~~~~~-~----~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMA-------SSTLSVIDTTSNT---VAGTVKT-G----KSPLGLALSPDGKKL 130 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSSEEEEEETT-------TTEEEEEETTTTE---EEEEEEC-S----SSEEEEEECTTSSEE
T ss_pred EEEEEECCCCccceEECCCCCEEEEEECC-------CCEEEEEECCCCe---EEEEEeC-C----CCcceEEECCCCCEE
Confidence 33333333355668899999999877533 2359999998762 2233332 2 345688999999944
Q ss_pred EEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceee
Q 006979 316 FVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (623)
Q Consensus 316 ~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~ 395 (623)
+++.. +...|+.+|+.+++............. +.+. ++++.++++...++ .|+++|+.+++...
T Consensus 131 ~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~---------~~~~---~dg~~l~~~~~~~~--~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 131 YVTNN--GDKTVSVINTVTKAVINTVSVGRSPKG---------IAVT---PDGTKVYVANFDSM--SISVIDTVTNSVID 194 (391)
T ss_dssp EEEET--TTTEEEEEETTTTEEEEEEECCSSEEE---------EEEC---TTSSEEEEEETTTT--EEEEEETTTTEEEE
T ss_pred EEEeC--CCCEEEEEECCCCcEEEEEecCCCcce---------EEEC---CCCCEEEEEeCCCC--EEEEEECCCCeEEE
Confidence 33333 233688889888876555433222222 2232 37788877764444 47778988776654
Q ss_pred cccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 396 LDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 396 lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
.......+..+ +++++.+++.... .....|+++++.+++.
T Consensus 195 ~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 195 TVKVEAAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEECSSEEEEEEECTTSSEEEEEEEC-SSCCEEEEEETTTTEE
T ss_pred EEecCCCccceEECCCCCEEEEEecC-cCCCcEEEEECCCCeE
Confidence 33333334444 6677777666542 2346799999887753
No 101
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.37 E-value=2.3e-10 Score=116.39 Aligned_cols=239 Identities=11% Similarity=-0.010 Sum_probs=139.1
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCCCCc-eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCC
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~~~~-~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~ 232 (623)
.+.++++...++.|+++|+.++ +. ..+..+ .... .+.|+|||++++++.... ..|+++|+++++
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~----~~~~-~~~~s~dg~~l~~~~~~~--------~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTL--EILNQITLG----YDFV-DTAITSDCSNVVVTSDFC--------QTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTC--CEEEEEECC----CCEE-EEEECSSSCEEEEEESTT--------CEEEEEECSSSS
T ss_pred CCEEEEEecCCCeEEEEeCccc--ceeeeEEcc----CCcc-eEEEcCCCCEEEEEeCCC--------CeEEEEECCCCc
Confidence 3467777777788999999887 44 333322 1223 688999999887765532 579999999887
Q ss_pred cccc-eecccCCCcccc-eeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC
Q 006979 233 IQEP-KVLVSGSDFYAF-PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (623)
Q Consensus 233 ~~~~-~~l~~~~~~~~~-p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~ 310 (623)
. ............ ..|||||++|+ +. ...+ ....|+++|++++. ....+... .....+.|+|
T Consensus 74 ---~~~~~~~~~~~~~~~~~~s~dg~~l~-~~-~~~~---~~~~i~v~d~~~~~---~~~~~~~~-----~~~~~~~~sp 137 (331)
T 3u4y_A 74 ---PKVVAIQEGQSSMADVDITPDDQFAV-TV-TGLN---HPFNMQSYSFLKNK---FISTIPIP-----YDAVGIAISP 137 (331)
T ss_dssp ---CEEEEEEECSSCCCCEEECTTSSEEE-EC-CCSS---SSCEEEEEETTTTE---EEEEEECC-----TTEEEEEECT
T ss_pred ---eeEEecccCCCCccceEECCCCCEEE-Ee-cCCC---CcccEEEEECCCCC---eEEEEECC-----CCccceEECC
Confidence 3 322222223344 88999999988 43 2210 12279999998763 22233322 2346889999
Q ss_pred CCc-EEEEEeCCCCe-eeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeC
Q 006979 311 KGE-LFFVTDRKNGF-WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (623)
Q Consensus 311 DG~-l~~~~~~~~g~-~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~ 388 (623)
||+ +|+.... .+. -.+|.++.. +............+. ....+.+. |+++.+|++...++ .|+++|+
T Consensus 138 dg~~l~~~~~~-~~~~i~~~~~~~~-g~~~~~~~~~~~~~~-----~~~~~~~s---pdg~~l~v~~~~~~--~v~v~d~ 205 (331)
T 3u4y_A 138 NGNGLILIDRS-SANTVRRFKIDAD-GVLFDTGQEFISGGT-----RPFNITFT---PDGNFAFVANLIGN--SIGILET 205 (331)
T ss_dssp TSSCEEEEEET-TTTEEEEEEECTT-CCEEEEEEEEECSSS-----SEEEEEEC---TTSSEEEEEETTTT--EEEEEEC
T ss_pred CCCEEEEEecC-CCceEEEEEECCC-CcEeecCCccccCCC-----CccceEEC---CCCCEEEEEeCCCC--eEEEEEC
Confidence 999 5554443 344 455555532 222111100000000 11223333 48888887764444 5777788
Q ss_pred CCCce----eecccCCcceEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCcceee
Q 006979 389 FGHSL----SLLDIPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAV 439 (623)
Q Consensus 389 ~~~~~----~~lt~~~~~v~~--~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~l 439 (623)
++++. ..+..+. .... ++++++.+++... ....|+++++++++.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 206 QNPENITLLNAVGTNN-LPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGTLSFV 258 (331)
T ss_dssp SSTTSCEEEEEEECSS-CCCCEEECTTSSEEEEECS---SEEEEEEEETTTTEEEEE
T ss_pred CCCcccceeeeccCCC-CCceEEECCCCCEEEEEEc---CCCEEEEEECCCCceeee
Confidence 77664 3444332 2222 3778887776543 234589999998876544
No 102
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.37 E-value=8.4e-13 Score=139.03 Aligned_cols=151 Identities=18% Similarity=0.127 Sum_probs=103.0
Q ss_pred CcEEEEeecC-CCC--eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc---------CcCCHHhHHHHcCceEE
Q 006979 460 LPELIEFPTE-VPG--QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR---------GILNLSIQYWTSRGWAF 527 (623)
Q Consensus 460 ~~~~i~~~~~-~dg--~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~---------~~~~~~~~~~a~~G~~v 527 (623)
...++.|.+. .+| ..+.++++.|.+. . ..++.|+||++||++..... ..+...++.|+++||.|
T Consensus 45 ~~~~i~y~t~~~~g~~~~~~g~l~~P~~~--~--~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V 120 (397)
T 3h2g_A 45 RVAEFTYATIGVEGEPATASGVLLIPGGE--R--CSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVV 120 (397)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEECT--T--CCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEE
T ss_pred EEEEEEEEecCCCCCeEEEEEEEEeCCCC--C--CCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEE
Confidence 4456677654 123 4588999999763 1 14678999999998654332 23667888999999999
Q ss_pred EEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhC-CCCCCCceEEEEcChHHHHHHHHh-cC-C-----Ccee
Q 006979 528 VDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS-GKADEKRLCITGGSAGGYTTLAAL-AF-R-----DTFK 599 (623)
Q Consensus 528 ~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~-~~~d~~rv~i~G~S~GG~~~~~~~-~~-~-----~~f~ 599 (623)
+++||||.|+.+..............++.|...++..+.++ +..|++||+++|||+||++++.++ .. + -.+.
T Consensus 121 ~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 200 (397)
T 3h2g_A 121 VGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLV 200 (397)
T ss_dssp EEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEE
T ss_pred EEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceE
Confidence 99999998765421110000000013455666666665544 666788999999999999998776 22 2 2689
Q ss_pred EEEecccCCCHHHhh
Q 006979 600 AGASLYGVSIPVIIS 614 (623)
Q Consensus 600 a~v~~~g~~d~~~~~ 614 (623)
+++..+++.|+....
T Consensus 201 ~~~~~~~~~~l~~~~ 215 (397)
T 3h2g_A 201 ASAPISGPYALEQTF 215 (397)
T ss_dssp EEEEESCCSSHHHHH
T ss_pred EEecccccccHHHHH
Confidence 999999999997553
No 103
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.37 E-value=2.9e-12 Score=127.85 Aligned_cols=130 Identities=15% Similarity=0.121 Sum_probs=101.4
Q ss_pred EeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHH
Q 006979 465 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRE 544 (623)
Q Consensus 465 ~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~ 544 (623)
.+... +|..++++++.|.+ ++.|+||++||.+. ....|...++.|+++||.|+.+|+||.|......
T Consensus 21 ~~~~~-~g~~l~~~~~~~~~--------~~~~~vv~~hG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-- 87 (303)
T 3pe6_A 21 HLVNA-DGQYLFCRYWAPTG--------TPKALIFVSHGAGE--HSGRYEELARMLMGLDLLVFAHDHVGHGQSEGER-- 87 (303)
T ss_dssp EEECT-TSCEEEEEEECCSS--------CCSEEEEEECCTTC--CGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSST--
T ss_pred eEecC-CCeEEEEEEeccCC--------CCCeEEEEECCCCc--hhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCC--
Confidence 45566 89999999998864 44689999999843 3346778899999999999999999976654321
Q ss_pred hhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 545 RLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 545 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.....-...++|+.++++++..+ .+.++|.++|||+||++++.++ .+|++++++|..+|..+.
T Consensus 88 -~~~~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 151 (303)
T 3pe6_A 88 -MVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 151 (303)
T ss_dssp -TCCSSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSB
T ss_pred -CCCCCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccC
Confidence 11111123478999999998876 3457999999999999999999 889999999999998765
No 104
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.35 E-value=4.4e-12 Score=126.78 Aligned_cols=138 Identities=14% Similarity=0.176 Sum_probs=93.4
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCC---HHhHHHHcCceEEEEECCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN---LSIQYWTSRGWAFVDVNYGGS 535 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~---~~~~~~a~~G~~v~~~d~rGs 535 (623)
...+.+++.+...|.++..+ |.|.+ .|+||++||++.......|. ...++++++||+|+.+|++++
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~----------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~ 77 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG----------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAY 77 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS----------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTT
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC----------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCC
Confidence 46678888875367888888 67743 38999999995322222222 245678889999999999876
Q ss_pred CCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 536 TGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 536 ~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
+.|.. +.....+.+.....+ +++.++.++-.+|++|++|+|+||||++++.++ ++|++|+++|+.+|..++.
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~~---~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 150 (280)
T 1r88_A 78 SMYTN-WEQDGSKQWDTFLSA---ELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 150 (280)
T ss_dssp STTSB-CSSCTTCBHHHHHHT---HHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred CccCC-CCCCCCCcHHHHHHH---HHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcC
Confidence 54421 100000111111112 344455543347889999999999999999988 8999999999999998764
No 105
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.34 E-value=2.5e-12 Score=126.67 Aligned_cols=146 Identities=14% Similarity=0.058 Sum_probs=95.1
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH--HhHH-HHcCceEEEEECCCCCCC
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQY-WTSRGWAFVDVNYGGSTG 537 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~--~~~~-~a~~G~~v~~~d~rGs~~ 537 (623)
.+.+++.+...|..+.+++|.|++.+.+..++++.|+||++||++... ..+.. .... +.++||+|+.+|+++++.
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 84 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNH--NSWLKRTNVERLLRGTNLIVVMPNTSNGWY 84 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCT--THHHHHSCHHHHTTTCCCEEEECCCTTSTT
T ss_pred EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCH--HHHHhccCHHHHHhcCCeEEEEECCCCCcc
Confidence 355666654367889999999987210111246789999999985332 23332 2333 445899999999998653
Q ss_pred CchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCCCHHH
Q 006979 538 YGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 538 ~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~d~~~ 612 (623)
..... ...+-....+|+...++++..+..+|++||+|+|+|+||++++.++.+|++|+++|+.+|..++..
T Consensus 85 ~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~v~~~~~~~~~~ 155 (263)
T 2uz0_A 85 TDTQY----GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLALTTNRFSHAASFSGALSFQN 155 (263)
T ss_dssp SBCTT----SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHHHHCCCSEEEEESCCCCSSS
T ss_pred ccCCC----cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHhCccccceEEEecCCcchhh
Confidence 22110 001111123456666666554345788999999999999999986668889999999999987654
No 106
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.34 E-value=7e-12 Score=126.96 Aligned_cols=136 Identities=11% Similarity=0.104 Sum_probs=98.4
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCC-CCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS-TGY 538 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs-~~~ 538 (623)
.++...+... +|..++++.+.|.... .+..|.||++||.+ .....|...+..|+++||.|+.+|+||. |.+
T Consensus 6 ~~~~~~i~~~-dG~~l~~~~~~p~~~~-----~~~~~~VvllHG~g--~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S 77 (305)
T 1tht_A 6 KTIAHVLRVN-NGQELHVWETPPKENV-----PFKNNTILIASGFA--RRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLS 77 (305)
T ss_dssp SCEEEEEEET-TTEEEEEEEECCCTTS-----CCCSCEEEEECTTC--GGGGGGHHHHHHHHTTTCCEEEECCCBCC---
T ss_pred cceEEEEEcC-CCCEEEEEEecCcccC-----CCCCCEEEEecCCc--cCchHHHHHHHHHHHCCCEEEEeeCCCCCCCC
Confidence 3455667776 8999999998876410 23458899999984 3344677889999999999999999996 443
Q ss_pred chhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCCCHHH
Q 006979 539 GREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 539 g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~d~~~ 612 (623)
... ...+.. ...+|+.++++++.+.+ .+++.++||||||++++.++..| .++++|...|..++..
T Consensus 78 ~~~-----~~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~~-~v~~lvl~~~~~~~~~ 143 (305)
T 1tht_A 78 SGS-----IDEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISDL-ELSFLITAVGVVNLRD 143 (305)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTTS-CCSEEEEESCCSCHHH
T ss_pred CCc-----ccceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCcc-CcCEEEEecCchhHHH
Confidence 221 112222 23578889999998543 47999999999999999999557 7899999888877643
No 107
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.34 E-value=1.4e-12 Score=130.00 Aligned_cols=147 Identities=12% Similarity=0.082 Sum_probs=96.0
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCceEEEEECCCCCC--
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNYGGST-- 536 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G~~v~~~d~rGs~-- 536 (623)
..+.+.+.+...|..+.+++|.|++ +++ ++++|+||++||++...... ......+.++++||+|+.+|.++.|
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~--~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~ 89 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPG--ASE--SNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDN 89 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTT--CBT--TBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTT
T ss_pred eEEEEEEechhcCCceEEEEEcCCC--CCC--CCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccc
Confidence 3455666664368899999999987 433 67899999999985433211 1112456677889999999976432
Q ss_pred ---------CCchhHH-HhhccCC-ccch-HHHHH-HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEE
Q 006979 537 ---------GYGREFR-ERLLGRW-GIVD-VNDCC-SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGA 602 (623)
Q Consensus 537 ---------~~g~~~~-~~~~~~~-g~~~-~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v 602 (623)
|.|..+. ......+ +... .+++. +++.++.+...+ ++|++|+|+|+||++++.++ .+|++|++++
T Consensus 90 ~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~ 168 (280)
T 3ls2_A 90 VPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSAS 168 (280)
T ss_dssp SCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEE
T ss_pred cccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEE
Confidence 1122211 1111111 1111 22222 344555544333 58999999999999999998 8999999999
Q ss_pred ecccCCCHH
Q 006979 603 SLYGVSIPV 611 (623)
Q Consensus 603 ~~~g~~d~~ 611 (623)
+.+|+.++.
T Consensus 169 ~~s~~~~~~ 177 (280)
T 3ls2_A 169 AFSPIVNPI 177 (280)
T ss_dssp EESCCSCGG
T ss_pred EecCccCcc
Confidence 999998764
No 108
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.34 E-value=1.6e-12 Score=129.53 Aligned_cols=147 Identities=14% Similarity=0.118 Sum_probs=97.1
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCceEEEEECCCCCCC-
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNYGGSTG- 537 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G~~v~~~d~rGs~~- 537 (623)
..+.+.+.+...|..+.+++|.|++ ++. ++++|+||++||++...... ......+.++++||+|+.+|.++.+.
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~--~~~--~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~ 91 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQ--AST--GAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEG 91 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGG--GGT--TCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTT
T ss_pred cEEEEEEeccccCCeeEEEEEeCCC--CCC--CCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccc
Confidence 4456667664378899999999987 332 67899999999985433211 11114566778899999999875332
Q ss_pred ----------CchhH-HHhhccCCcc-ch-HHHH-HHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEE
Q 006979 538 ----------YGREF-RERLLGRWGI-VD-VNDC-CSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGA 602 (623)
Q Consensus 538 ----------~g~~~-~~~~~~~~g~-~~-~~D~-~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v 602 (623)
.|..+ .......+.. .. .+.+ .++++++.++..+ ++||+|+|+|+||++++.++ .+|++|+++|
T Consensus 92 ~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 170 (280)
T 3i6y_A 92 VADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVS 170 (280)
T ss_dssp CCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEE
T ss_pred cCcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEE
Confidence 11111 1111111110 11 2222 2455566554334 68999999999999999998 8899999999
Q ss_pred ecccCCCHH
Q 006979 603 SLYGVSIPV 611 (623)
Q Consensus 603 ~~~g~~d~~ 611 (623)
+.+|+.++.
T Consensus 171 ~~s~~~~~~ 179 (280)
T 3i6y_A 171 AFSPINNPV 179 (280)
T ss_dssp EESCCCCGG
T ss_pred EeCCccccc
Confidence 999998764
No 109
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.34 E-value=8.1e-12 Score=131.84 Aligned_cols=134 Identities=17% Similarity=0.120 Sum_probs=101.7
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH-HhHHHHcCceEEEEECCCCCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL-SIQYWTSRGWAFVDVNYGGSTGY 538 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~-~~~~~a~~G~~v~~~d~rGs~~~ 538 (623)
..+.+.++. +|..++++++.+. +++.|+||++||.+. ....+.. ....+.++||.|+.+|+||.|..
T Consensus 134 ~~~~~~i~~--~~~~l~~~~~~~~--------~~~~p~vv~~HG~~~--~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s 201 (405)
T 3fnb_A 134 PLKSIEVPF--EGELLPGYAIISE--------DKAQDTLIVVGGGDT--SREDLFYMLGYSGWEHDYNVLMVDLPGQGKN 201 (405)
T ss_dssp CCEEEEEEE--TTEEEEEEEECCS--------SSCCCEEEEECCSSC--CHHHHHHHTHHHHHHTTCEEEEECCTTSTTG
T ss_pred CcEEEEEeE--CCeEEEEEEEcCC--------CCCCCEEEEECCCCC--CHHHHHHHHHHHHHhCCcEEEEEcCCCCcCC
Confidence 567788887 5889999988542 344599999999843 2223322 23356689999999999997654
Q ss_pred chhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhhh
Q 006979 539 GREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIISE 615 (623)
Q Consensus 539 g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~~ 615 (623)
... .........+|+.+++++|..++ ++|+|+|+|+||++++.++ .+| +++++|+.+|+.|+.....
T Consensus 202 ~~~-----~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~ 269 (405)
T 3fnb_A 202 PNQ-----GLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFR 269 (405)
T ss_dssp GGG-----TCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHH
T ss_pred CCC-----CCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHH
Confidence 221 12233455889999999998775 7999999999999999999 677 8999999999999876543
No 110
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.34 E-value=1.8e-12 Score=132.33 Aligned_cols=108 Identities=17% Similarity=0.151 Sum_probs=83.9
Q ss_pred CCCCCEEEEecCCCCCc-ccCcCCHHhHHHHcC-ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCC
Q 006979 492 EEKPPLLVKSHGGPTSE-ARGILNLSIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSG 569 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~-~~~~~~~~~~~~a~~-G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~ 569 (623)
+..+|+||++|||++.. ....+...+..|+.+ ||.|+.+|||+.++.. ....++|+.++++|+.++
T Consensus 77 ~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----------~~~~~~d~~~a~~~l~~~- 144 (322)
T 3k6k_A 77 GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP-----------FPAAVDDCVAAYRALLKT- 144 (322)
T ss_dssp TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC-----------CchHHHHHHHHHHHHHHc-
Confidence 34456699999985322 223445566777764 9999999999876532 123478999999999988
Q ss_pred CCCCCceEEEEcChHHHHHHHHh-cCCCc----eeEEEecccCCCHH
Q 006979 570 KADEKRLCITGGSAGGYTTLAAL-AFRDT----FKAGASLYGVSIPV 611 (623)
Q Consensus 570 ~~d~~rv~i~G~S~GG~~~~~~~-~~~~~----f~a~v~~~g~~d~~ 611 (623)
.+|++||+|+|+|+||++++.++ .+++. ++++|+++|+.|+.
T Consensus 145 ~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 191 (322)
T 3k6k_A 145 AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLT 191 (322)
T ss_dssp HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTT
T ss_pred CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcc
Confidence 47899999999999999999888 55544 89999999998864
No 111
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.34 E-value=1.5e-12 Score=136.46 Aligned_cols=115 Identities=21% Similarity=0.306 Sum_probs=85.3
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchh--------------H-------HH---hhc
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE--------------F-------RE---RLL 547 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~--------------~-------~~---~~~ 547 (623)
+++.|+||++||++. ....+...++.|+++||+|+++|+||.+..... | .. ...
T Consensus 95 ~~~~P~Vv~~HG~~~--~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 172 (383)
T 3d59_A 95 GEKYPLVVFSHGLGA--FRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIR 172 (383)
T ss_dssp SSCEEEEEEECCTTC--CTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHH
T ss_pred CCCCCEEEEcCCCCC--CchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhh
Confidence 567899999999843 344677889999999999999999997653210 0 00 000
Q ss_pred cCCccchHHHHHHHHHHHHh--------------------CCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccC
Q 006979 548 GRWGIVDVNDCCSCATFLVG--------------------SGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGV 607 (623)
Q Consensus 548 ~~~g~~~~~D~~~~~~~l~~--------------------~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~ 607 (623)
...-....+|+.+++++|.+ ++.+|++||+++|||+||++++.++.++.+|+|+|+.+|.
T Consensus 173 ~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~v~a~v~~~~~ 252 (383)
T 3d59_A 173 NEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAW 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCCCccEEEEeCCc
Confidence 00001125789999999875 5668899999999999999999998555579999999885
Q ss_pred C
Q 006979 608 S 608 (623)
Q Consensus 608 ~ 608 (623)
.
T Consensus 253 ~ 253 (383)
T 3d59_A 253 M 253 (383)
T ss_dssp C
T ss_pred c
Confidence 3
No 112
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.34 E-value=7e-12 Score=124.49 Aligned_cols=110 Identities=18% Similarity=0.118 Sum_probs=87.9
Q ss_pred CCCCCEEEEecCCCCCc---ccCcCCHHhHHH----HcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHH
Q 006979 492 EEKPPLLVKSHGGPTSE---ARGILNLSIQYW----TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATF 564 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~---~~~~~~~~~~~~----a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~ 564 (623)
+++.|+||++|||++.. ....|...++.| +++||.|+.+|||+++.... ...++|+.+++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~-----------~~~~~d~~~~~~~ 106 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN-----------PRNLYDAVSNITR 106 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-----------THHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCC-----------CcHHHHHHHHHHH
Confidence 45679999999986432 333566677777 68999999999998654211 1347899999999
Q ss_pred HHhCCCCCCCceEEEEcChHHHHHHHHh-cC-----------------CCceeEEEecccCCCHHHhh
Q 006979 565 LVGSGKADEKRLCITGGSAGGYTTLAAL-AF-----------------RDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 565 l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-----------------~~~f~a~v~~~g~~d~~~~~ 614 (623)
+.++ ++.+||+|+|+|+||++++.++ .+ ++.++++|..+|+.++....
T Consensus 107 l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~ 172 (273)
T 1vkh_A 107 LVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELL 172 (273)
T ss_dssp HHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHH
T ss_pred HHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhh
Confidence 9887 5778999999999999999998 54 78999999999999886553
No 113
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.33 E-value=2.4e-12 Score=130.46 Aligned_cols=116 Identities=17% Similarity=0.208 Sum_probs=92.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|.. .+.+|.|.. ..+.|+||++||++. ....+...++.|+++||.|+.+|+||.+.....
T Consensus 80 ~g~~-~~~~~~p~~-------~~~~p~vv~~HG~~~--~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~--------- 140 (306)
T 3vis_A 80 DGFG-GGTIYYPRE-------NNTYGAIAISPGYTG--TQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS--------- 140 (306)
T ss_dssp SSSC-CEEEEEESS-------CSCEEEEEEECCTTC--CHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH---------
T ss_pred CCCc-ceEEEeeCC-------CCCCCEEEEeCCCcC--CHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch---------
Confidence 4443 245666765 346799999999843 333566788899999999999999996654322
Q ss_pred ccchHHHHHHHHHHHHhC------CCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGS------GKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~------~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
..+|+.++++|+.++ ..+|++||+|+|+|+||++++.++ .+|+ ++++|+++|..+
T Consensus 141 ---~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~ 202 (306)
T 3vis_A 141 ---RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL 202 (306)
T ss_dssp ---HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS
T ss_pred ---HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC
Confidence 247899999999998 778999999999999999999999 7777 899999998765
No 114
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.33 E-value=9.7e-10 Score=112.51 Aligned_cols=237 Identities=10% Similarity=0.031 Sum_probs=142.8
Q ss_pred EEEEEeCC------CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 156 TVIFSNYK------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 156 ~l~f~~~~------~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
.+++.... ++.|+++|+.++ .....+... .......|+|||+++++..... ..|+++|++
T Consensus 54 ~l~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~ 119 (353)
T 3vgz_A 54 ALWLATSQSRKLDKGGVVYRLDPVTL-EVTQAIHND-----LKPFGATINNTTQTLWFGNTVN--------SAVTAIDAK 119 (353)
T ss_dssp EEEEEECCCTTTEESEEEEEECTTTC-CEEEEEEES-----SCCCSEEEETTTTEEEEEETTT--------TEEEEEETT
T ss_pred EEEEEcCCCcCCCCCccEEEEcCCCC-eEEEEEecC-----CCcceEEECCCCCEEEEEecCC--------CEEEEEeCC
Confidence 56555533 557999999876 222333321 2345678999999887765432 579999999
Q ss_pred CCCcccceecccCCCc---------ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 230 GQNIQEPKVLVSGSDF---------YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 230 ~g~~~~~~~l~~~~~~---------~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
+++. ...+..+... .....|||||++|++..+.. ...|+++|..++. ....+....
T Consensus 120 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~~~~---~~~~~~~~~---- 184 (353)
T 3vgz_A 120 TGEV--KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDGGNIK---LKTAIQNTG---- 184 (353)
T ss_dssp TCCE--EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEETTTTE---EEEEECCCC----
T ss_pred CCee--EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcCCCCc---eEEEecCCC----
Confidence 8873 2333222111 23468999999988776432 3469999988762 333333222
Q ss_pred ccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCe
Q 006979 301 ESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 380 (623)
Q Consensus 301 ~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~ 380 (623)
..+..+.|+|||+.+|+.+. + ..|+.+|+.+++.......... .+. .....+.+. |+++.+|+... +.
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~-~--~~i~~~d~~~~~~~~~~~~~~~--~~~--~~~~~~~~s---~dg~~l~~~~~--~~ 252 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNA-D--GELITIDTADNKILSRKKLLDD--GKE--HFFINISLD---TARQRAFITDS--KA 252 (353)
T ss_dssp TTCCCCEEETTTTEEEEECT-T--SEEEEEETTTTEEEEEEECCCS--SSC--CCEEEEEEE---TTTTEEEEEES--SS
T ss_pred CccceEEECCCCCEEEEEcC-C--CeEEEEECCCCeEEEEEEcCCC--CCC--cccceEEEC---CCCCEEEEEeC--CC
Confidence 34568899999995555554 3 3678899988875544322100 000 000122333 38888877653 34
Q ss_pred EEEEEEeCCCCcee-ecccCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 381 SYLGILDDFGHSLS-LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 381 ~~L~~~d~~~~~~~-~lt~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
..|+++|+.+++.. .+..+....-.++++++++++.... ...|+++++++++.
T Consensus 253 ~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 253 AEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQ---AGKVSVIDAKSYKV 306 (353)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETT---TTEEEEEETTTTEE
T ss_pred CEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECC---CCeEEEEECCCCeE
Confidence 56888999877654 4444332222337788877766532 25789999887763
No 115
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.33 E-value=1.4e-12 Score=130.25 Aligned_cols=145 Identities=12% Similarity=0.089 Sum_probs=94.3
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCceEEEEECC--CCCCC
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNY--GGSTG 537 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G~~v~~~d~--rGs~~ 537 (623)
.+.+.+.+...|..+.+.+|.|++.+ ++++|+||++||++...... ......+.++++||+|+.+|. ||.+.
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~-----~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~ 96 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE-----NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQV 96 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT-----CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTS
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC-----CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccc
Confidence 34555555436889999999998732 56789999999985443321 112345677788999999995 44432
Q ss_pred ---------CchhH-HHhhccCCc-cch-HHHHH-HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEe
Q 006979 538 ---------YGREF-RERLLGRWG-IVD-VNDCC-SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGAS 603 (623)
Q Consensus 538 ---------~g~~~-~~~~~~~~g-~~~-~~D~~-~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~ 603 (623)
.|..+ .......+. ... .+.+. +++.++.+.. -+++||+|+|+|+||++++.++ .+|++|+++++
T Consensus 97 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~ 175 (283)
T 4b6g_A 97 PNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHF-PTNGKRSIMGHSMGGHGALVLALRNQERYQSVSA 175 (283)
T ss_dssp CCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHS-CEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEE
T ss_pred cccccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhC-CCCCCeEEEEEChhHHHHHHHHHhCCccceeEEE
Confidence 22221 111111111 111 22222 3444444432 2578999999999999999988 88999999999
Q ss_pred cccCCCHH
Q 006979 604 LYGVSIPV 611 (623)
Q Consensus 604 ~~g~~d~~ 611 (623)
.+|+.++.
T Consensus 176 ~s~~~~~~ 183 (283)
T 4b6g_A 176 FSPILSPS 183 (283)
T ss_dssp ESCCCCGG
T ss_pred ECCccccc
Confidence 99988754
No 116
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.32 E-value=5.7e-12 Score=123.83 Aligned_cols=132 Identities=13% Similarity=0.115 Sum_probs=95.4
Q ss_pred cEEEEe-ecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 461 PELIEF-PTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 461 ~~~i~~-~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
.+.+.+ .+. +|..++.+.+.+.+ .+.|+||++||++.......+......++++||.|+.+|+||.|...
T Consensus 11 ~~~~~~~~~~-~g~~l~~~~~~~~~--------~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 81 (270)
T 3llc_A 11 THAITVGQGS-DARSIAALVRAPAQ--------DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASG 81 (270)
T ss_dssp EEEEEESSGG-GCEEEEEEEECCSS--------TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCC
T ss_pred cceEEEeecc-CcceEEEEeccCCC--------CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCC
Confidence 344554 445 78889877676643 23589999999854433223345677788999999999999977654
Q ss_pred hhHHHhhccCCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-c---CC---CceeEEEecccCCCHH
Q 006979 540 REFRERLLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-A---FR---DTFKAGASLYGVSIPV 611 (623)
Q Consensus 540 ~~~~~~~~~~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~---~~---~~f~a~v~~~g~~d~~ 611 (623)
..... .. ....+|+.++++++. .++|.++|||+||++++.++ . +| +.++++|..+|..++.
T Consensus 82 ~~~~~-----~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~ 150 (270)
T 3llc_A 82 GAFRD-----GTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFT 150 (270)
T ss_dssp SCGGG-----CCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHH
T ss_pred Ccccc-----ccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccch
Confidence 43211 11 112556666666663 57999999999999999998 7 89 8999999999998876
Q ss_pred H
Q 006979 612 I 612 (623)
Q Consensus 612 ~ 612 (623)
.
T Consensus 151 ~ 151 (270)
T 3llc_A 151 S 151 (270)
T ss_dssp H
T ss_pred h
Confidence 5
No 117
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.32 E-value=2.6e-11 Score=114.32 Aligned_cols=125 Identities=11% Similarity=0.075 Sum_probs=95.6
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH--HhHHHHcCceEEEEECCCCCCCC-
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYWTSRGWAFVDVNYGGSTGY- 538 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~--~~~~~a~~G~~v~~~d~rGs~~~- 538 (623)
+...+.. +|.++++++|.|.+ +.|+||++||++. ....+.. .++.|+++||.|+.+|+||.+..
T Consensus 5 ~~~~~~~--~g~~l~~~~~~~~~---------~~~~vv~~hG~~~--~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~ 71 (207)
T 3bdi_A 5 QEEFIDV--NGTRVFQRKMVTDS---------NRRSIALFHGYSF--TSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSA 71 (207)
T ss_dssp EEEEEEE--TTEEEEEEEECCTT---------CCEEEEEECCTTC--CGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSC
T ss_pred eeEEEee--CCcEEEEEEEeccC---------CCCeEEEECCCCC--CccccchHHHHHHHHhCCCeEEEEcCCcccccC
Confidence 3344444 78999999998864 3589999999953 3345666 88999999999999999986554
Q ss_pred --chhHHHhhccCCccc-hHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 539 --GREFRERLLGRWGIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 539 --g~~~~~~~~~~~g~~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
... .... +.+|+.+.+..++++ .+.++|+++|+|+||.+++.++ .+|++++++|..+|...
T Consensus 72 ~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~ 136 (207)
T 3bdi_A 72 SSEKY--------GIDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWV 136 (207)
T ss_dssp CCTTT--------CCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSC
T ss_pred cccCC--------CCCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccc
Confidence 221 1122 567777777777665 3457999999999999999988 78999999999998743
No 118
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.32 E-value=1.5e-12 Score=133.13 Aligned_cols=116 Identities=12% Similarity=0.088 Sum_probs=89.1
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCc-ccCcCCHHhHHHH-cCceEEEEECCCCCCCCchhHHHhhccCCcc
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGSTGYGREFRERLLGRWGI 552 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~-~~~~~~~~~~~~a-~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~ 552 (623)
+.++++.|.+ ++.|+||++|||++.. ....+...+..|+ +.||.|+.+||||+++....
T Consensus 84 ~~~~~~~p~~--------~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~----------- 144 (326)
T 3d7r_A 84 MQVFRFNFRH--------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHID----------- 144 (326)
T ss_dssp EEEEEEESTT--------CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCHH-----------
T ss_pred EEEEEEeeCC--------CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCch-----------
Confidence 5667777753 3458999999986432 2223445566676 46999999999997653221
Q ss_pred chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCc----eeEEEecccCCCHH
Q 006979 553 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDT----FKAGASLYGVSIPV 611 (623)
Q Consensus 553 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~----f~a~v~~~g~~d~~ 611 (623)
..++|+.++++++.++ +|++||+|+|+|+||++++.++ .+++. ++++|+.+|+.|+.
T Consensus 145 ~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~ 206 (326)
T 3d7r_A 145 DTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDAT 206 (326)
T ss_dssp HHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccC
Confidence 2378999999999887 7889999999999999999988 66655 99999999988764
No 119
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.31 E-value=2.3e-12 Score=128.80 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=82.8
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.+.||++||.+. ....|...++.|+++||.|+++|+||.|.+..... ...+ ....+|+.+++++|.+. .+
T Consensus 51 ~~~VlllHG~~~--s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~---~~~~-~~~~~d~~~~~~~l~~~----~~ 120 (281)
T 4fbl_A 51 RIGVLVSHGFTG--SPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMA---ASTA-SDWTADIVAAMRWLEER----CD 120 (281)
T ss_dssp SEEEEEECCTTC--CGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHH---TCCH-HHHHHHHHHHHHHHHHH----CS
T ss_pred CceEEEECCCCC--CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCcccc---CCCH-HHHHHHHHHHHHHHHhC----CC
Confidence 356889999743 33467788999999999999999999665543322 1111 12368899999999765 36
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
+|.|+||||||++++.++ .+|++++++|..+|..++
T Consensus 121 ~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~ 157 (281)
T 4fbl_A 121 VLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRM 157 (281)
T ss_dssp EEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCC
T ss_pred eEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcc
Confidence 999999999999999999 899999999999997654
No 120
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.30 E-value=7.4e-12 Score=123.47 Aligned_cols=128 Identities=18% Similarity=0.181 Sum_probs=95.1
Q ss_pred cEEEEeecC-CCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 461 PELIEFPTE-VPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 461 ~~~i~~~~~-~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
.+.+.++.. .++.. .+.+|.|.... .++.|+||++||... ....+...++.|+++||.|+.+|+||.+...
T Consensus 25 ~~~~~~~~~~~~~~~-~~~l~~p~~~~-----~~~~p~vv~~HG~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 96 (262)
T 1jfr_A 25 TSQTSVSSLVASGFG-GGTIYYPTSTA-----DGTFGAVVISPGFTA--YQSSIAWLGPRLASQGFVVFTIDTNTTLDQP 96 (262)
T ss_dssp EEEEEECTTTCSSSC-CEEEEEESCCT-----TCCEEEEEEECCTTC--CGGGTTTHHHHHHTTTCEEEEECCSSTTCCH
T ss_pred ccceEecceeccCCC-ceeEEecCCCC-----CCCCCEEEEeCCcCC--CchhHHHHHHHHHhCCCEEEEeCCCCCCCCC
Confidence 445555543 12222 34566665411 356799999999843 3446777889999999999999999976543
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHh----CCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVG----SGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.. ..+|+.++++++.+ ...+|.++|+++|||+||++++.++ .+|+ ++++|..+|...
T Consensus 97 ~~------------~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~ 158 (262)
T 1jfr_A 97 DS------------RGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT 158 (262)
T ss_dssp HH------------HHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS
T ss_pred ch------------hHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc
Confidence 21 25688899999987 3457789999999999999999999 7787 899999998754
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.29 E-value=2.4e-10 Score=116.04 Aligned_cols=233 Identities=11% Similarity=0.040 Sum_probs=137.9
Q ss_pred EEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCe--eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc
Q 006979 157 VIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLV--SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (623)
Q Consensus 157 l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~--~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~ 234 (623)
++++...++.|+++|+.++ .....+... .. ....+.|+|||+++++..... ..|+++|+.+++.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~-~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~~- 68 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM-AVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKS--------ESLVKIDLVTGET- 68 (337)
T ss_dssp EEEEEETTTEEEEEETTTT-EEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTT--------TEEEEEETTTCCE-
T ss_pred EEEEcCCCCeEEEEECCCC-cEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCC--------CeEEEEECCCCCe-
Confidence 4566667788999999876 222333322 11 345688999999887765432 5799999988862
Q ss_pred cceecccCC-----CcccceeeCCCCCEEEEEEecCC-CCCC---CceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 235 EPKVLVSGS-----DFYAFPRMDPRGERMAWIEWHHP-NMPW---DKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 235 ~~~~l~~~~-----~~~~~p~wSPDG~~la~~~~~~~-~~p~---~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
...+..+. .......|||||++|++...... ...+ ....|+++|++++. ....+.. . ..+..
T Consensus 69 -~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~-~----~~~~~ 139 (337)
T 1pby_B 69 -LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFEA-P----RQITM 139 (337)
T ss_dssp -EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEEC-C----SSCCC
T ss_pred -EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEeC-C----CCcce
Confidence 22333221 13456789999999987742100 0000 13569999997662 2233332 2 34567
Q ss_pred ceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC-----
Q 006979 306 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG----- 379 (623)
Q Consensus 306 ~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g----- 379 (623)
+.|+|||+ +++. + ..|+.+|+.+++...............|.+ +++.+++.....+
T Consensus 140 ~~~s~dg~~l~~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~------------dg~~l~~~~~~~~~~~~~ 201 (337)
T 1pby_B 140 LAWARDGSKLYGL-G-----RDLHVMDPEAGTLVEDKPIQSWEAETYAQP------------DVLAVWNQHESSGVMATP 201 (337)
T ss_dssp EEECTTSSCEEEE-S-----SSEEEEETTTTEEEEEECSTTTTTTTBCCC------------BCCCCCCCCTTTTEEEEE
T ss_pred eEECCCCCEEEEe-C-----CeEEEEECCCCcEeeeeeccccCCCceeCC------------CccEEeeeccCCCceeee
Confidence 89999999 5554 2 258899998887654443221111223433 4444433322111
Q ss_pred ----------------eEEEEEEeCCCCceeecccCC--cceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 380 ----------------RSYLGILDDFGHSLSLLDIPF--TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 380 ----------------~~~L~~~d~~~~~~~~lt~~~--~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
...|+++|+.+++...+.... .....+ +++++.+++. ...|+++++++++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 202 FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA------YNVLESFDLEKNAS 272 (337)
T ss_dssp EEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE------ESEEEEEETTTTEE
T ss_pred eeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe------CCeEEEEECCCCcC
Confidence 126899999988776443321 122233 7777777765 26899999988764
No 122
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.29 E-value=1.4e-11 Score=124.66 Aligned_cols=142 Identities=13% Similarity=0.164 Sum_probs=93.7
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH---HhHHHHcCceEEEEECCCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGST 536 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~---~~~~~a~~G~~v~~~d~rGs~ 536 (623)
+.+.+++.+...+..+..+ +.|. .+++|+||++||++.......|.. ..++++++||+|+.+|+++++
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~--------~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~ 78 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG--------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSS 78 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC--------STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTC
T ss_pred eEEEEEEECccCCCceEEE-ECCC--------CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCc
Confidence 5567777775346778866 5553 246899999999853222223322 346778899999999998765
Q ss_pred CCchhHHHhh--ccCCccchHHHH--HHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 537 GYGREFRERL--LGRWGIVDVNDC--CSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 537 ~~g~~~~~~~--~~~~g~~~~~D~--~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
.|.. +.... .+..+....++. .+++.++.++-.++++|++|+|+||||++++.++ ++|++|+++|+++|..++.
T Consensus 79 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 157 (304)
T 1sfr_A 79 FYSD-WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (304)
T ss_dssp TTCB-CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cccc-cCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcc
Confidence 4421 10000 000011223333 2445555543347788999999999999999988 8999999999999987653
No 123
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=1.1e-10 Score=119.15 Aligned_cols=249 Identities=11% Similarity=0.079 Sum_probs=140.7
Q ss_pred CHHHHhccCCc-cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-E
Q 006979 80 TADVVSGASKR-LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-T 156 (623)
Q Consensus 80 t~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~ 156 (623)
+++.+...... .+++.|+| ++.+||++... + .|++++..++ +.+.+.... ...++.++++ .
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~---~--~i~~~d~~~~-~~~~~~~~~----------~v~~i~~~~dg~ 102 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILE---R--ELHELHLASG-RKTVHALPF----------MGSALAKISDSK 102 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGG---T--EEEEEETTTT-EEEEEECSS----------CEEEEEEEETTE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCC---C--EEEEEECCCC-cEEEEECCC----------cceEEEEeCCCe
Confidence 45666665444 47899999 89999998663 2 3777776532 222211111 1233444444 5
Q ss_pred EEEEeCCCCcEEEEeCCCCCCCceecCCCC-CCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 157 VIFSNYKDQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 157 l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~-~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
+++.. ...|+++|++++ ..+.+.... ..+..+.+++.++|+|+.++....... ......||+++ +++
T Consensus 103 l~v~~--~~gl~~~d~~~g--~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~---~~~~~~l~~~~--~g~--- 170 (326)
T 2ghs_A 103 QLIAS--DDGLFLRDTATG--VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA---ETGAGSIYHVA--KGK--- 170 (326)
T ss_dssp EEEEE--TTEEEEEETTTC--CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC---CTTCEEEEEEE--TTE---
T ss_pred EEEEE--CCCEEEEECCCC--cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC---CCCceEEEEEe--CCc---
Confidence 55554 334999999877 555554321 122356788999999985544332211 11237899999 455
Q ss_pred ceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEec-CCC-ceeeeEEEcCCC-CCccccCcCceeCCCC
Q 006979 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENG-DVYKRVCVAGFD-PTIVESPTEPKWSSKG 312 (623)
Q Consensus 236 ~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~-~~~-~~~~~~~~~~~~-~~~~~~~~~~~ws~DG 312 (623)
.+.+..+......+.|||||++|++.... ...|++++++ ..+ .+...+.+.... .. ..+....+++||
T Consensus 171 ~~~~~~~~~~~~~i~~s~dg~~lyv~~~~-------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~--~~p~gi~~d~~G 241 (326)
T 2ghs_A 171 VTKLFADISIPNSICFSPDGTTGYFVDTK-------VNRLMRVPLDARTGLPTGKAEVFIDSTGIK--GGMDGSVCDAEG 241 (326)
T ss_dssp EEEEEEEESSEEEEEECTTSCEEEEEETT-------TCEEEEEEBCTTTCCBSSCCEEEEECTTSS--SEEEEEEECTTS
T ss_pred EEEeeCCCcccCCeEEcCCCCEEEEEECC-------CCEEEEEEcccccCCcccCceEEEECCCCC--CCCCeeEECCCC
Confidence 45554433445678899999999887522 3469999986 222 222222222111 01 344567888999
Q ss_pred cEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 313 ~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
.+++ +.. +...|+++|+++...+.+......+. ...|. .++++.||++....+
T Consensus 242 ~lwv-a~~--~~~~v~~~d~~g~~~~~i~~~~~~~~---------~~af~--g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 242 HIWN-ARW--GEGAVDRYDTDGNHIARYEVPGKQTT---------CPAFI--GPDASRLLVTSAREH 294 (326)
T ss_dssp CEEE-EEE--TTTEEEEECTTCCEEEEEECSCSBEE---------EEEEE--STTSCEEEEEEBCTT
T ss_pred CEEE-EEe--CCCEEEEECCCCCEEEEEECCCCCcE---------EEEEe--cCCCCEEEEEecCCC
Confidence 7554 433 22368899985444444432211111 12221 026677877776554
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.29 E-value=6.1e-10 Score=117.82 Aligned_cols=246 Identities=11% Similarity=0.070 Sum_probs=148.4
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCC--CCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPD--YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~--~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+++++ .+++....++.|+++|+.++ ........ ............|+|+|+.++. .... ..|++
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s-~~~d--------~~v~~ 195 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSG--QTVRLSPPEKYKKKLGFVETISIPEHNELWVS-QMQA--------NAVHV 195 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTC--CEEEECCCHHHHTTCCEEEEEEEGGGTEEEEE-EGGG--------TEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCC--eEeeecCcccccccCCceeEEEEcCCCEEEEE-ECCC--------CEEEE
Confidence 3445544 78888777778999999877 44332221 0011234567889999875544 3322 56999
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+++++. ...+...........|+|||++|++.... ...|+++|+.++. ....+.. . ..+..
T Consensus 196 ~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~i~~~d~~~~~---~~~~~~~-~----~~~~~ 258 (433)
T 3bws_A 196 FDLKTLAY--KATVDLTGKWSKILLYDPIRDLVYCSNWI-------SEDISVIDRKTKL---EIRKTDK-I----GLPRG 258 (433)
T ss_dssp EETTTCCE--EEEEECSSSSEEEEEEETTTTEEEEEETT-------TTEEEEEETTTTE---EEEECCC-C----SEEEE
T ss_pred EECCCceE--EEEEcCCCCCeeEEEEcCCCCEEEEEecC-------CCcEEEEECCCCc---EEEEecC-C----CCceE
Confidence 99988762 23343334455667899999988776532 2359999987662 2222322 2 34678
Q ss_pred ceeCCCCc-EEEEEeCCC----CeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCe
Q 006979 306 PKWSSKGE-LFFVTDRKN----GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 380 (623)
Q Consensus 306 ~~ws~DG~-l~~~~~~~~----g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~ 380 (623)
+.|+|||+ +++...... +...|+.+|+.+++...............|. |+++.++++...++
T Consensus 259 ~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~------------~~g~~l~~~~~~~~- 325 (433)
T 3bws_A 259 LLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSG------------NTENKIYVSDMCCS- 325 (433)
T ss_dssp EEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEEC------------SSTTEEEEEETTTT-
T ss_pred EEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEEC------------CCCCEEEEEecCCC-
Confidence 89999998 554443211 2357889999888765544322222222332 37778888765555
Q ss_pred EEEEEEeCCCCceeecccCCcceEee--eecCCEEEEEEecCCC-----------CCeEEEEEcCCCcc
Q 006979 381 SYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVE-----------PSSVAKVTLDDHKL 436 (623)
Q Consensus 381 ~~L~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~-----------~~~ly~~~l~~~~~ 436 (623)
.|+++|+++++..........+..+ +++++.+++....... ...|+++++++++.
T Consensus 326 -~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 326 -KIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp -EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred -EEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 5666788777654322222334444 6677777666543322 24899999887763
No 125
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.28 E-value=7.1e-10 Score=112.86 Aligned_cols=262 Identities=11% Similarity=0.061 Sum_probs=137.0
Q ss_pred ceEEEeCC--EEEEEeCCCCcEEEEeCC--CCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 006979 148 GAFRIFGD--TVIFSNYKDQRLYKHSID--SKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 148 ~~~~~s~d--~l~f~~~~~~~l~~~d~~--~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L 223 (623)
...+++++ .+++....++.|.+++++ ++ ..+.+.... . ........|+|||++|++..... ..|
T Consensus 41 ~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~-~-~~~~~~~~~s~dg~~l~~~~~~~--------~~i 108 (343)
T 1ri6_A 41 QPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG--ALTFAAESA-L-PGSLTHISTDHQGQFVFVGSYNA--------GNV 108 (343)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEEECTTTC--CEEEEEEEE-C-SSCCSEEEECTTSSEEEEEETTT--------TEE
T ss_pred ceEEECCCCCEEEEeecCCCeEEEEEecCCCC--ceeeccccc-c-CCCCcEEEEcCCCCEEEEEecCC--------CeE
Confidence 34555555 566666555778877765 55 444332210 0 12345678999999887765432 457
Q ss_pred EEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE--EEcCCCCCccc
Q 006979 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV--CVAGFDPTIVE 301 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~--~~~~~~~~~~~ 301 (623)
+++|++.+...................|||||++|+..... ...|+++++...+.+.... ...... . .
T Consensus 109 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~-~--~ 178 (343)
T 1ri6_A 109 SVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-------QDRICLFTVSDDGHLVAQDPAEVTTVE-G--A 178 (343)
T ss_dssp EEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEEEEECST-T--C
T ss_pred EEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-------CCEEEEEEecCCCceeeecccccccCC-C--C
Confidence 77777433210122223333345567899999998766522 2358999998743322111 122111 1 2
Q ss_pred cCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeec---ccccccccccccCcceeEEeecCCCCEEEEEEEEC
Q 006979 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSL---DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (623)
Q Consensus 302 ~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~---~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~ 378 (623)
.+..+.|+|||+.+++.....+.-.+|.++..+++.+.+... ...+....+ ...+.+ +|+++.++++...+
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~i~~---s~dg~~l~v~~~~~ 252 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW---AADIHI---TPDGRHLYACDRTA 252 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC---EEEEEE---CTTSSEEEEEETTT
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC---ccceEE---CCCCCEEEEEecCC
Confidence 345688999999444444324544444444345554332211 111111100 012333 34888887776556
Q ss_pred CeEEEEEEeCCCCceeecc---cCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcceee
Q 006979 379 GRSYLGILDDFGHSLSLLD---IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAV 439 (623)
Q Consensus 379 g~~~L~~~d~~~~~~~~lt---~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~~l 439 (623)
+.-.+|.++.+++..+.+. .... +..+ +++++.+++... ....-.+|.++.++++.+.+
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQ-KSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECT-TTCEEEEEEEETTTTEEEEE
T ss_pred CEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecC-CCCeEEEEEEcCCCceeeEc
Confidence 6656665554455554432 2222 3333 667776665543 33334567778777765444
No 126
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.28 E-value=3.8e-10 Score=113.24 Aligned_cols=258 Identities=10% Similarity=0.003 Sum_probs=151.3
Q ss_pred HHHhccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEE
Q 006979 82 DVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIF 159 (623)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f 159 (623)
+.+......++++.|+| ++.+||++... + .|++++..+ ..+.+.... .....++++++ .+++
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~---~--~i~~~~~~~--~~~~~~~~~---------~~~~~l~~~~dg~l~v 84 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQ---N--RTWAWSDDG--QLSPEMHPS---------HHQNGHCLNKQGHLIA 84 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGG---T--EEEEEETTS--CEEEEESSC---------SSEEEEEECTTCCEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCC---C--EEEEEECCC--CeEEEECCC---------CCcceeeECCCCcEEE
Confidence 33444445567899999 77799998663 3 367776652 222221111 01234555554 5666
Q ss_pred EeCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCCCCCEEEEEEec-cC--------CCCCCceeEEEEEEcC
Q 006979 160 SNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPRFNRYVTVRED-RR--------QDALNSTTEIVAIALN 229 (623)
Q Consensus 160 ~~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sPdG~~l~~v~~~-~~--------~~~~~~~~~L~~idl~ 229 (623)
....++.|+++|++++ ..+.+... ...+..+..+..++|+|+.++ +... .. .........||+++.+
T Consensus 85 ~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v-td~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 85 CSHGLRRLERQREPGG--EWESIADSFEGKKLNSPNDVCLAPDGSLWF-SDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp EETTTTEEEEECSTTC--CEEEEECEETTEECCCCCCEEECTTSCEEE-EECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred EecCCCeEEEEcCCCC--cEEEEeeccCCCCCCCCCCEEECCCCCEEE-ECCccccccccccccccccCCCcEEEEECCC
Confidence 6655677999999776 55555332 111122456789999998443 2210 00 0000112589999987
Q ss_pred CCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCce-eeeEEEcCCCCCccccCcCcee
Q 006979 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 230 ~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~w 308 (623)
++ .+.+...........|||||+.| +.... ...|++++++..+.+ .....+ ... . ..+..+.+
T Consensus 162 -g~---~~~~~~~~~~~~gi~~s~dg~~l-v~~~~-------~~~i~~~~~~~~g~~~~~~~~~-~~~-~--~~p~~i~~ 225 (296)
T 3e5z_A 162 -GT---LSAPIRDRVKPNGLAFLPSGNLL-VSDTG-------DNATHRYCLNARGETEYQGVHF-TVE-P--GKTDGLRV 225 (296)
T ss_dssp -SC---EEEEECCCSSEEEEEECTTSCEE-EEETT-------TTEEEEEEECSSSCEEEEEEEE-CCS-S--SCCCSEEE
T ss_pred -CC---EEEeecCCCCCccEEECCCCCEE-EEeCC-------CCeEEEEEECCCCcCcCCCeEe-eCC-C--CCCCeEEE
Confidence 55 55555555556678899999988 66522 346999998744443 334444 222 1 45678899
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeC
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~ 388 (623)
++||++++.. . ..|+++|+++...+.+..... .. ...|- +++++.|++++. ..|+++++
T Consensus 226 d~~G~l~v~~-~----~~v~~~~~~g~~~~~~~~~~~-~~---------~~~f~--~~d~~~L~v~t~----~~l~~~~~ 284 (296)
T 3e5z_A 226 DAGGLIWASA-G----DGVHVLTPDGDELGRVLTPQT-TS---------NLCFG--GPEGRTLYMTVS----TEFWSIET 284 (296)
T ss_dssp BTTSCEEEEE-T----TEEEEECTTSCEEEEEECSSC-CC---------EEEEE--STTSCEEEEEET----TEEEEEEC
T ss_pred CCCCCEEEEc-C----CeEEEECCCCCEEEEEECCCC-ce---------eEEEE--CCCCCEEEEEcC----CeEEEEEc
Confidence 9999866555 2 258889987554454442211 22 22221 126677877763 26999999
Q ss_pred CCCceee
Q 006979 389 FGHSLSL 395 (623)
Q Consensus 389 ~~~~~~~ 395 (623)
.++.++.
T Consensus 285 ~~~~~~~ 291 (296)
T 3e5z_A 285 NVRGLEH 291 (296)
T ss_dssp SCCBCCC
T ss_pred ccccccc
Confidence 8877653
No 127
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.27 E-value=9.5e-10 Score=111.61 Aligned_cols=245 Identities=9% Similarity=-0.026 Sum_probs=141.4
Q ss_pred eEEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCC-CCeeecceeeCCCCCEEEEEEeccCCCCCC---ceeE
Q 006979 149 AFRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGE-PLVSYADGIFDPRFNRYVTVREDRRQDALN---STTE 222 (623)
Q Consensus 149 ~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~-~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~---~~~~ 222 (623)
..+++++ .+++....++.|+++|+.++ .....+...... .......+.|+|||++|++........+.+ ....
T Consensus 38 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 1pby_B 38 VPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116 (337)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEETTTC-CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred ceEEcCCCCEEEEEeCCCCeEEEEECCCC-CeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCce
Confidence 3455554 57777777788999999876 222334432000 011345688999999888775211000000 1267
Q ss_pred EEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcccc
Q 006979 223 IVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 302 (623)
Q Consensus 223 L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~ 302 (623)
|+++|+++++. ...+.. ........|||||++|++. +. .|+++|+.++. ....+.... .
T Consensus 117 i~v~d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~--~~--------~i~~~d~~~~~---~~~~~~~~~-----~ 175 (337)
T 1pby_B 117 VALYDAETLSR--RKAFEA-PRQITMLAWARDGSKLYGL--GR--------DLHVMDPEAGT---LVEDKPIQS-----W 175 (337)
T ss_dssp EEEEETTTTEE--EEEEEC-CSSCCCEEECTTSSCEEEE--SS--------SEEEEETTTTE---EEEEECSTT-----T
T ss_pred EEEEECCCCcE--EEEEeC-CCCcceeEECCCCCEEEEe--CC--------eEEEEECCCCc---Eeeeeeccc-----c
Confidence 99999988762 223332 3334567899999998876 21 28999998762 222232211 1
Q ss_pred CcCceeCCCCc-EEEEEeCCCCe---------------------eeEEEEecCCCeEEEEeecccccccccccccCccee
Q 006979 303 PTEPKWSSKGE-LFFVTDRKNGF---------------------WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYE 360 (623)
Q Consensus 303 ~~~~~ws~DG~-l~~~~~~~~g~---------------------~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~ 360 (623)
.....|+|||+ +++.... .+. +.|+.+|+.+++...+...... .. ...+.
T Consensus 176 ~~~~~~s~dg~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~------~~~~~ 247 (337)
T 1pby_B 176 EAETYAQPDVLAVWNQHES-SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD-VF------YFSTA 247 (337)
T ss_dssp TTTTBCCCBCCCCCCCCTT-TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS-SC------EEEEE
T ss_pred CCCceeCCCccEEeeeccC-CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC-Cc------eeeEE
Confidence 23458999998 5443322 222 1678899988876533321110 00 01122
Q ss_pred EEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 361 IIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 361 ~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+ +|+++.+++. ...|+++|+++++.. .+..+. ....+ +++++++++. . ....|+++++++++.
T Consensus 248 ~---s~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-~---~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 248 V---NPAKTRAFGA-----YNVLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLG-G---ALGDLAAYDAETLEK 313 (337)
T ss_dssp E---CTTSSEEEEE-----ESEEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEE-S---BSSEEEEEETTTCCE
T ss_pred E---CCCCCEEEEe-----CCeEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEE-c---CCCcEEEEECcCCcE
Confidence 3 3388877776 257889999887654 333332 22233 6777777664 2 246799999988764
No 128
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.27 E-value=1.3e-11 Score=127.90 Aligned_cols=145 Identities=19% Similarity=0.095 Sum_probs=100.3
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc----CCHHhHHHHcCceEEEEECCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI----LNLSIQYWTSRGWAFVDVNYGGS 535 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~----~~~~~~~~a~~G~~v~~~d~rGs 535 (623)
..+...+.+. +|..++++.+.|.... ..+.++.|.||++||.+....... +...++.|+++||.|+++|+||.
T Consensus 26 ~~~~~~~~~~-dG~~l~~~~~~~~~~~--~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 26 PAEEYEVVTE-DGYILGIDRIPYGRKN--SENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp CCEEEEEECT-TSEEEEEEEECSCSSC--CTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CceEEEeEcC-CCCEEEEEEecCCCCC--ccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 4577888887 9999998888775410 000135689999999865443211 22345589999999999999997
Q ss_pred CCCchhHHH-hhcc---CCccch-HH-HHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC---ceeEEEecc
Q 006979 536 TGYGREFRE-RLLG---RWGIVD-VN-DCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD---TFKAGASLY 605 (623)
Q Consensus 536 ~~~g~~~~~-~~~~---~~g~~~-~~-D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~---~f~a~v~~~ 605 (623)
|.....-.. .... .+...+ .+ |+.++++++.++ .+.+++.++|||+||.+++.++ .+|+ .++++|..+
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 655431000 0000 112112 34 888899988765 2347999999999999999988 7888 899999999
Q ss_pred cCCC
Q 006979 606 GVSI 609 (623)
Q Consensus 606 g~~d 609 (623)
|...
T Consensus 181 ~~~~ 184 (377)
T 1k8q_A 181 PVAT 184 (377)
T ss_dssp CCSC
T ss_pred Cchh
Confidence 8764
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.26 E-value=1.3e-09 Score=110.95 Aligned_cols=267 Identities=6% Similarity=-0.016 Sum_probs=144.5
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQ 165 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~ 165 (623)
..+..+.|+| ++.+|..... ++...+|..+..++ +.+.+..-. ........+++++ .+++....++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~---~~~v~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~ 106 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRP---EFRVLAYRIAPDDG-ALTFAAESA-------LPGSLTHISTDHQGQFVFVGSYNAG 106 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETT---TTEEEEEEECTTTC-CEEEEEEEE-------CSSCCSEEEECTTSSEEEEEETTTT
T ss_pred CCCceEEECCCCCEEEEeecC---CCeEEEEEecCCCC-ceeeccccc-------cCCCCcEEEEcCCCCEEEEEecCCC
Confidence 3566789999 6667766532 36666776654322 222211000 0012345566655 5777776677
Q ss_pred cEEEEeCCCCC-CCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC-CCcccce--eccc
Q 006979 166 RLYKHSIDSKD-SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQEPK--VLVS 241 (623)
Q Consensus 166 ~l~~~d~~~g~-~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~-g~~~~~~--~l~~ 241 (623)
.|+++++..+. ......... ........|+|||+++++..... ..|+++|+.+ ++..... .+..
T Consensus 107 ~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 107 NVSVTRLEDGLPVGVVDVVEG----LDGCHSANISPDNRTLWVPALKQ--------DRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp EEEEEEEETTEEEEEEEEECC----CTTBCCCEECTTSSEEEEEEGGG--------TEEEEEEECTTSCEEEEEEEEEEC
T ss_pred eEEEEECCCCccccccccccC----CCCceEEEECCCCCEEEEecCCC--------CEEEEEEecCCCceeeeccccccc
Confidence 78888884220 011122221 12345688999999887655222 5688889877 6521111 1211
Q ss_pred -CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC-CceeeeEEEcCCCCCc--cccCcCceeCCCCcEEEE
Q 006979 242 -GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN-GDVYKRVCVAGFDPTI--VESPTEPKWSSKGELFFV 317 (623)
Q Consensus 242 -~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~ws~DG~l~~~ 317 (623)
.........|+|||++|++.... ...|.+++++.. +.+............+ ...+..+.|+|||+.+++
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~-------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNEL-------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 247 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETT-------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred CCCCCcceEEECCCCCEEEEEeCC-------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEE
Confidence 12233446799999988877522 335888888642 2211122222111000 012335899999995555
Q ss_pred EeCCCCeeeEEEEecCCCeEEEEee--cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceee
Q 006979 318 TDRKNGFWNLHKWIESNNEVLAIYS--LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (623)
Q Consensus 318 ~~~~~g~~~L~~~d~~~~~~~~l~~--~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~ 395 (623)
+....+.-.+|.++..+++.+.+.. ...... .+.+. ++++.|++....++.-.+|.+|.++++++.
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~---------~~~~s---~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 315 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPR---------GFNVD---HSGKYLIAAGQKSHHISVYEIVGEQGLLHE 315 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEEEEEEECSSSCC---------CEEEC---TTSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred EecCCCEEEEEEEcCCCCceEEeeeecCCCccc---------eEEEC---CCCCEEEEecCCCCeEEEEEEcCCCceeeE
Confidence 5542454444444433555444432 111122 23333 378878877766788889999988887765
Q ss_pred cc
Q 006979 396 LD 397 (623)
Q Consensus 396 lt 397 (623)
+.
T Consensus 316 ~~ 317 (343)
T 1ri6_A 316 KG 317 (343)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 130
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.26 E-value=2e-12 Score=139.32 Aligned_cols=131 Identities=21% Similarity=0.271 Sum_probs=92.7
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCc-eEEEEECCC-CCCCCchhHHHhhccC
Q 006979 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRG-WAFVDVNYG-GSTGYGREFRERLLGR 549 (623)
Q Consensus 473 ~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G-~~v~~~d~r-Gs~~~g~~~~~~~~~~ 549 (623)
..++..+|.|... .+++|+||++|||+...... ......+.|+++| ++|+.+||| |..|++..-... ...
T Consensus 81 dcL~l~v~~P~~~------~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 81 DCLYVNVFAPDTP------SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CCCEEEEEEECSS------CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCEEEEEeCCCC------CCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 3466777888652 33489999999997433222 2223467788876 999999999 433333210000 112
Q ss_pred CccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHhcC---CCceeEEEecccCCCH
Q 006979 550 WGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVSIP 610 (623)
Q Consensus 550 ~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~---~~~f~a~v~~~g~~d~ 610 (623)
.+.....|+.++++|+.++. .+|++||.|+|+|+||++++.++.. +++|+++|+.+|..++
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 220 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRT 220 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCC
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCC
Confidence 33445789999999998752 3699999999999999999988843 5799999999998754
No 131
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.25 E-value=4.7e-11 Score=120.00 Aligned_cols=130 Identities=13% Similarity=0.159 Sum_probs=96.3
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+.+.+.. +|..+...++.+... .+..|+||++||.+.. ...|...+..|+++||.|+.+|+||.|...
T Consensus 19 ~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 88 (315)
T 4f0j_A 19 PVHYLDFTS--QGQPLSMAYLDVAPK------KANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVGFCKSS 88 (315)
T ss_dssp CCEEEEEEE--TTEEEEEEEEEECCS------SCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSC
T ss_pred cceeEEEec--CCCCeeEEEeecCCC------CCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCCCCCCC
Confidence 456677766 566666655544321 3456899999998543 345778889999999999999999976543
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.. .......+|+.+.+..++++ ++.+++.++|||+||++++.++ .+|++++++|...|+.
T Consensus 89 ~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 89 KP-------AHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp CC-------SSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred CC-------CccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 31 11234567777777766665 3456999999999999999999 8899999999999864
No 132
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.24 E-value=1.2e-09 Score=112.09 Aligned_cols=272 Identities=11% Similarity=0.059 Sum_probs=138.8
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCCc
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQR 166 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~~ 166 (623)
..+..+.++|++++|...... +++. ++.++..++ +.+.+.... .+.......++++| .+++....++.
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~-~~~~--v~~~~~~~g-~~~~~~~~~------~~~~~p~~~a~spdg~~l~~~~~~~~~ 109 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKED-DEGG--IAAWQIDGQ-TAHKLNTVV------APGTPPAYVAVDEARQLVYSANYHKGT 109 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEET-TEEE--EEEEEEETT-EEEEEEEEE------EESCCCSEEEEETTTTEEEEEETTTTE
T ss_pred CCcceEEEccCCeEEEEEecC-CCce--EEEEEecCC-cEEEeeeee------cCCCCCEEEEECCCCCEEEEEeCCCCE
Confidence 456678999944487776432 1244 444443322 222221100 01112344566665 57777666777
Q ss_pred EEEEeCCCCCCCceecCC---CCCCC-----CeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC-CCCcccce
Q 006979 167 LYKHSIDSKDSSPLPITP---DYGEP-----LVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN-GQNIQEPK 237 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~---~~~~~-----~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~-~g~~~~~~ 237 (623)
+.+++++.. ...+.+.. ....+ ........|+|||+ +++..... ..+++++++ +++.....
T Consensus 110 v~v~~~~~~-g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~--------~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 110 AEVMKIAAD-GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGS--------DKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEEEECTT-SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTT--------TEEEEEEECTTSCEEEEE
T ss_pred EEEEEeCCC-CCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCC--------CEEEEEEECCCCcEEEee
Confidence 888887522 13332221 10000 11234578999999 55433221 468888887 55421111
Q ss_pred eccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC-CceeeeEEEcCCCCCcc--ccCcCceeCCCCc
Q 006979 238 VLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN-GDVYKRVCVAGFDPTIV--ESPTEPKWSSKGE 313 (623)
Q Consensus 238 ~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~ws~DG~ 313 (623)
.+.. ........+|||||++|++.... ...+.+++++.. +.+.....+......+. ..+..+.|+|||+
T Consensus 180 ~~~~~~g~~p~~~~~spdg~~l~v~~~~-------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGEL-------SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETT-------TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred eEEcCCCCCCceEEECCCCCEEEEEeCC-------CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 1111 11123346899999988876522 234777777652 22222222222110000 1245688999999
Q ss_pred EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
.+|+++...+.-.+|.++. +++.+.+......... ...+.|. |+++.|+++...++...+|.+|.+++++
T Consensus 253 ~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~------~~~~~~s---pdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDF------PRDFDLD---PTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSC------CCEEEEC---TTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCC------cCeEEEC---CCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 5545544245445555443 3344443321110011 1233333 3888888877767888899999988888
Q ss_pred eecc
Q 006979 394 SLLD 397 (623)
Q Consensus 394 ~~lt 397 (623)
+.+.
T Consensus 323 ~~~~ 326 (347)
T 3hfq_A 323 SLLQ 326 (347)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 7654
No 133
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.23 E-value=7.5e-12 Score=119.33 Aligned_cols=112 Identities=11% Similarity=0.033 Sum_probs=79.4
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHH----HHHHHHHHHh
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVND----CCSCATFLVG 567 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D----~~~~~~~l~~ 567 (623)
++..|+||++||.. .....+...++.|...||.|+.||.+|.+.|+..+......+. ...++ +...++.+.+
T Consensus 19 ~~a~~~Vv~lHG~G--~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 19 QRAKKAVVMLHGRG--GTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQ--PALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TTCSEEEEEECCTT--CCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGT--THHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCC--CCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccch--HHHHHHHHHHHHHHHHHHH
Confidence 45568999999963 2333455567778889999999999987655544332222111 12333 3334444445
Q ss_pred CCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 568 SGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 568 ~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
. .+|++||+++|+|+||++++.++ ++|++|+++|+++|..
T Consensus 95 ~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l 135 (210)
T 4h0c_A 95 Q-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGL 135 (210)
T ss_dssp T-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCC
T ss_pred h-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCC
Confidence 5 48999999999999999999988 8999999999998853
No 134
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.23 E-value=2.5e-11 Score=119.76 Aligned_cols=109 Identities=15% Similarity=0.036 Sum_probs=86.7
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|+||++||.+. ....|...++.|+++||.|+.+|+||.|........ . .-....+|+.++++++.++ .+
T Consensus 40 ~~~vv~~HG~~~--~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~---~-~~~~~~~d~~~~i~~l~~~----~~ 109 (270)
T 3rm3_A 40 PVGVLLVHGFTG--TPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMER---T-TFHDWVASVEEGYGWLKQR----CQ 109 (270)
T ss_dssp SEEEEEECCTTC--CGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHT---C-CHHHHHHHHHHHHHHHHTT----CS
T ss_pred CeEEEEECCCCC--ChhHHHHHHHHHHHCCCEEEEeCCCCCCCCcccccc---C-CHHHHHHHHHHHHHHHHhh----CC
Confidence 389999999853 334577889999999999999999997765442211 1 1122368899999999877 57
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHHhh
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVIIS 614 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~~~ 614 (623)
+|+++|+|+||++++.++ .+|+ ++++|+.+|..++....
T Consensus 110 ~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~ 149 (270)
T 3rm3_A 110 TIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIA 149 (270)
T ss_dssp EEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHH
T ss_pred cEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccc
Confidence 999999999999999998 7898 99999999988876554
No 135
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.23 E-value=5.8e-11 Score=118.12 Aligned_cols=117 Identities=21% Similarity=0.244 Sum_probs=87.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc-CcC-CHHhHHHHcCceEEEEECCCCCCCCchhHHHhhcc
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GIL-NLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG 548 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~-~~~-~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~ 548 (623)
+|..+ .+|.|.+ ++.|+||++|||.+.... ..+ ......+++.||.|+.+|||+.+++ .|
T Consensus 13 ~~~~~--~~y~p~~--------~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--~~------ 74 (274)
T 2qru_A 13 NGATV--TIYPTTT--------EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--KI------ 74 (274)
T ss_dssp TSCEE--EEECCSS--------SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS--CH------
T ss_pred CCeeE--EEEcCCC--------CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC--CC------
Confidence 55444 5677742 346899999999753332 233 3456678889999999999986532 22
Q ss_pred CCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhc----CCCceeEEEecccCCC
Q 006979 549 RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA----FRDTFKAGASLYGVSI 609 (623)
Q Consensus 549 ~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~----~~~~f~a~v~~~g~~d 609 (623)
...++|+.++++|+.++.. +++||+|+|+|+||++++.++. ++..+++.+..+|+.|
T Consensus 75 ---p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~ 135 (274)
T 2qru_A 75 ---DHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTD 135 (274)
T ss_dssp ---HHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSC
T ss_pred ---cHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccc
Confidence 1248999999999987642 2789999999999999998873 4678899999999887
No 136
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.23 E-value=2.3e-11 Score=117.93 Aligned_cols=107 Identities=12% Similarity=0.103 Sum_probs=84.5
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCC-chhHHHhhccCCccchHHHHHHHHHHHHhCCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY-GREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 572 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~-g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 572 (623)
..|.||++||.+. ....|...++.|+++||.|+.+|+||.|.. +...... ..+ ....+|+.++++++.++
T Consensus 21 ~~~~vv~~HG~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~--~~~-~~~~~d~~~~i~~l~~~---- 91 (251)
T 3dkr_A 21 TDTGVVLLHAYTG--SPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK--GNP-DIWWAESSAAVAHMTAK---- 91 (251)
T ss_dssp SSEEEEEECCTTC--CGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH--CCH-HHHHHHHHHHHHHHHTT----
T ss_pred CCceEEEeCCCCC--CHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc--ccH-HHHHHHHHHHHHHHHHh----
Confidence 4578899999843 334677889999999999999999998766 3322211 011 12268899999999877
Q ss_pred CCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 573 EKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.++++++|||+||++++.++ .+|+++++++..+|..+
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~ 129 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILP 129 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCT
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhh
Confidence 57999999999999999999 78999999999998876
No 137
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.22 E-value=4.4e-12 Score=138.39 Aligned_cols=127 Identities=20% Similarity=0.248 Sum_probs=89.9
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc-CCHHhHHHH-cCceEEEEECCC-CCCCCchhHHHhhccCCc
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWT-SRGWAFVDVNYG-GSTGYGREFRERLLGRWG 551 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~-~~~~~~~~a-~~G~~v~~~d~r-Gs~~~g~~~~~~~~~~~g 551 (623)
+...+|.|.... .++++|+||++|||+....... +.. ..|+ ++|++|+.+||| |..|++........ +
T Consensus 99 l~lnv~~P~~~~----~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~---~ 169 (542)
T 2h7c_A 99 LYLNIYTPADLT----KKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSR---G 169 (542)
T ss_dssp CEEEEEECSCTT----SCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC---C
T ss_pred cEEEEEECCCCC----CCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCc---c
Confidence 556678887521 1467899999999975433332 322 2355 479999999999 43333222111122 3
Q ss_pred cchHHHHHHHHHHHHhC---CCCCCCceEEEEcChHHHHHHHHh-c--CCCceeEEEecccCCCH
Q 006979 552 IVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAAL-A--FRDTFKAGASLYGVSIP 610 (623)
Q Consensus 552 ~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~-~--~~~~f~a~v~~~g~~d~ 610 (623)
.....|+.++++|+.++ -..|++||.|+|+|+||++++.++ . .+.+|+++|+.+|..+.
T Consensus 170 n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 170 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 33478999999999875 237999999999999999999888 3 36799999999997653
No 138
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.21 E-value=1.8e-10 Score=113.51 Aligned_cols=126 Identities=11% Similarity=-0.021 Sum_probs=92.0
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchh
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 541 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~ 541 (623)
++..+.. +|..++...+.|.+ .|.||++||.+.. ...|...+..|+++||.|+.+|+||.|.....
T Consensus 5 ~~~~~~~--~g~~l~~~~~g~~~----------~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 70 (286)
T 3qit_A 5 EEKFLEF--GGNQICLCSWGSPE----------HPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFGHGRSSHL 70 (286)
T ss_dssp EEEEEEE--TTEEEEEEEESCTT----------SCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC
T ss_pred hhheeec--CCceEEEeecCCCC----------CCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCCCCCCCCC
Confidence 3444544 68889988775532 4789999999543 34567788999999999999999997654332
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
. .......++..+.+..++++ ++.+++.++|||+||++++.++ .+|++++++|...|...
T Consensus 71 ~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 71 E------MVTSYSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLP 131 (286)
T ss_dssp S------SGGGCSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred C------CCCCcCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCC
Confidence 1 01223345555555555543 2347899999999999999999 88999999999998754
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.19 E-value=3.6e-09 Score=107.91 Aligned_cols=161 Identities=9% Similarity=-0.013 Sum_probs=96.8
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.++++...++.|+++|+.++ ...+.+... . ......+.|+|||+++++..... ..|+++|+++++.
T Consensus 12 ~~~v~~~~~~~v~~~d~~~~-~~~~~~~~~--~-~~~~~~~~~s~dg~~~~v~~~~~--------~~i~~~d~~t~~~-- 77 (349)
T 1jmx_B 12 EYMIVTNYPNNLHVVDVASD-TVYKSCVMP--D-KFGPGTAMMAPDNRTAYVLNNHY--------GDIYGIDLDTCKN-- 77 (349)
T ss_dssp EEEEEEETTTEEEEEETTTT-EEEEEEECS--S-CCSSCEEEECTTSSEEEEEETTT--------TEEEEEETTTTEE--
T ss_pred EEEEEeCCCCeEEEEECCCC-cEEEEEecC--C-CCCCceeEECCCCCEEEEEeCCC--------CcEEEEeCCCCcE--
Confidence 56677767888999999876 222333322 0 01245678999999777665322 5799999998762
Q ss_pred ceecccCC------CcccceeeCCCCCEEEEEEecC--CCCCC--CceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 236 PKVLVSGS------DFYAFPRMDPRGERMAWIEWHH--PNMPW--DKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 236 ~~~l~~~~------~~~~~p~wSPDG~~la~~~~~~--~~~p~--~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
...+..+. .......|||||++|++...+. ....+ ....|+++|+.++........... . ..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~----~~~~~ 152 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-P----RQVYL 152 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-C----SSCCC
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-C----Ccccc
Confidence 22232111 1245678999999998876330 00000 124699999987532112222222 2 23556
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEe
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~ 341 (623)
..|+|||+ +|+... .|+++|+.+++.....
T Consensus 153 ~~~s~dg~-l~~~~~-----~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 153 MRAADDGS-LYVAGP-----DIYKMDVKTGKYTVAL 182 (349)
T ss_dssp EEECTTSC-EEEESS-----SEEEECTTTCCEEEEE
T ss_pred eeECCCCc-EEEccC-----cEEEEeCCCCceeccc
Confidence 77999999 444432 2889999887755443
No 140
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.19 E-value=2.1e-11 Score=115.84 Aligned_cols=114 Identities=11% Similarity=0.037 Sum_probs=79.1
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHH-----h-hccC----CccchHHHHHHH
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRE-----R-LLGR----WGIVDVNDCCSC 561 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~-----~-~~~~----~g~~~~~D~~~~ 561 (623)
+++.| ||++||.. .....+...++.++ .||.|+.+|.++..+.+..|.. . ..+. ......+++.+.
T Consensus 14 ~~~~p-vv~lHG~g--~~~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 89 (209)
T 3og9_A 14 KDLAP-LLLLHSTG--GDEHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDE 89 (209)
T ss_dssp TTSCC-EEEECCTT--CCTTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHH
T ss_pred CCCCC-EEEEeCCC--CCHHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHH
Confidence 45578 99999984 34445667777777 7999999995532211111111 0 0000 011235566677
Q ss_pred HHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 562 ATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 562 ~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
++.+.++..+|++||+|+|+|+||++++.++ .+|++++++|+.+|...
T Consensus 90 ~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~ 138 (209)
T 3og9_A 90 VSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQL 138 (209)
T ss_dssp HHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCC
T ss_pred HHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCC
Confidence 7777666668999999999999999999988 88999999999998754
No 141
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.19 E-value=7.4e-11 Score=118.92 Aligned_cols=116 Identities=19% Similarity=0.159 Sum_probs=91.1
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECC--------CCCCCCchhHHH
Q 006979 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY--------GGSTGYGREFRE 544 (623)
Q Consensus 473 ~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~--------rGs~~~g~~~~~ 544 (623)
..+...+|.|.+. .++.|+||.+||+.. ...+||+|+.+|+ ||+.|+|.-|.-
T Consensus 90 ~~~~~~i~lP~~~------~~p~Pvii~i~~~~~-------------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~l 150 (375)
T 3pic_A 90 ISFTVTITYPSSG------TAPYPAIIGYGGGSL-------------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDL 150 (375)
T ss_dssp EEEEEEEECCSSS------CSSEEEEEEETTCSS-------------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHH
T ss_pred eEEEEEEECCCCC------CCCccEEEEECCCcc-------------ccCCCeEEEEecccccccccCCCCccceecccc
Confidence 3477889999762 467899999998511 1468999999997 677778874321
Q ss_pred -hhccCCccchH--HHHHHHHHHHHhCC--CCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccC
Q 006979 545 -RLLGRWGIVDV--NDCCSCATFLVGSG--KADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGV 607 (623)
Q Consensus 545 -~~~~~~g~~~~--~D~~~~~~~l~~~~--~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~ 607 (623)
.....||.... =|+..+++||..++ .||++||+|+|+|+||..+++++...++|+++|+..+.
T Consensus 151 y~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~Ri~~~v~~~~g 218 (375)
T 3pic_A 151 YGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEKRIVLTLPQESG 218 (375)
T ss_dssp HCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCTTEEEEEEESCC
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCCceEEEEeccCC
Confidence 11235666544 38999999999998 99999999999999999999999777799999998754
No 142
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.18 E-value=3.7e-11 Score=113.71 Aligned_cols=122 Identities=13% Similarity=0.064 Sum_probs=88.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH--HhHHHHcCceEEEEECCCCCCCCchhHHHhhcc
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG 548 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~--~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~ 548 (623)
+|..++++.+.|.+ +++.|+||++||++... ..+.. .+..|+++||.|+.+|+||.|..... ....
T Consensus 15 ~g~~l~~~~~~p~~-------~~~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---~~~~ 82 (210)
T 1imj_A 15 QGQALFFREALPGS-------GQARFSVLLLHGIRFSS--ETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEA---AAPA 82 (210)
T ss_dssp TTEEECEEEEECSS-------SCCSCEEEECCCTTCCH--HHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTS---CCSS
T ss_pred CCeEEEEEEeCCCC-------CCCCceEEEECCCCCcc--ceeecchhHHHHHHCCCeEEEecCCCCCCCCCC---CCcc
Confidence 68899999998865 45679999999985332 34444 47889999999999999985432221 1111
Q ss_pred CCccc-hHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 549 RWGIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 549 ~~g~~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.+... ..+|+...++++ +.++++++|+|+||++++.++ .+|+.++++|..+|....
T Consensus 83 ~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 140 (210)
T 1imj_A 83 PIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD 140 (210)
T ss_dssp CTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG
T ss_pred hhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccc
Confidence 11111 125666666665 246899999999999999888 789999999999998643
No 143
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.17 E-value=1.8e-11 Score=128.71 Aligned_cols=139 Identities=17% Similarity=0.092 Sum_probs=96.1
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceE----EEEECCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWA----FVDVNYGG 534 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~----v~~~d~rG 534 (623)
.+.+.+.+.+...|..+..++|.|.+ +. .+++|+|+++||+.+... ..+....+.|+++|++ |+.+|++|
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~--~~---~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~ 239 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGD--VT---AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAID 239 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC----------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCS
T ss_pred CceEEEEEEccccCCcEEEEEEeCCC--CC---CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCC
Confidence 35667888775467889999999976 31 467999999999633211 1233467788888875 99999986
Q ss_pred CCCCchhHHHhhccCCccchHHHH--HHHHHHHHhCC--CCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 535 STGYGREFRERLLGRWGIVDVNDC--CSCATFLVGSG--KADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 535 s~~~g~~~~~~~~~~~g~~~~~D~--~~~~~~l~~~~--~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
..+ +.... .+...+.|. .+++.++.++. ..|++|++|+|+||||++++.++ .+|++|+++++.+|..+
T Consensus 240 ~~~-----r~~~~--~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 240 TTH-----RAHEL--PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 312 (403)
T ss_dssp HHH-----HHHHS--SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred Ccc-----ccccC--CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccc
Confidence 211 11101 111233443 35677776642 36899999999999999999999 89999999999999875
Q ss_pred H
Q 006979 610 P 610 (623)
Q Consensus 610 ~ 610 (623)
+
T Consensus 313 ~ 313 (403)
T 3c8d_A 313 W 313 (403)
T ss_dssp T
T ss_pred c
Confidence 4
No 144
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.17 E-value=6e-11 Score=114.06 Aligned_cols=113 Identities=12% Similarity=-0.029 Sum_probs=81.8
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEE-------------------CCCCCCCCchhHHHhhccCCcc
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV-------------------NYGGSTGYGREFRERLLGRWGI 552 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~-------------------d~rGs~~~g~~~~~~~~~~~g~ 552 (623)
+++.|+||++||.+.. ...+......|+++||.|+.+ |+||.......... .-.
T Consensus 20 ~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~-----~~~ 92 (232)
T 1fj2_A 20 RKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDES-----GIK 92 (232)
T ss_dssp SCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHH-----HHH
T ss_pred CCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccH-----HHH
Confidence 4567999999998533 334556677788889999998 55553111000000 011
Q ss_pred chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHH
Q 006979 553 VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 553 ~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
...+|+.++++++.+ ..+|+++|+++|+|+||++++.++ .+|+.++++|+.+|..+...
T Consensus 93 ~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 93 QAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp HHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred HHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 235677778888877 457889999999999999999999 78999999999999887654
No 145
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.17 E-value=2.4e-11 Score=116.55 Aligned_cols=128 Identities=12% Similarity=0.003 Sum_probs=88.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhc-cC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLL-GR 549 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~-~~ 549 (623)
++..++..++.|.. ...|+||++||.+. ....+......|++ ||.|+.+|.++..+.|..|..... +.
T Consensus 14 ~~~~l~~~~~~~~~--------~~~p~vv~lHG~g~--~~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~ 82 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK--------ESRECLFLLHGSGV--DETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTR 82 (223)
T ss_dssp CSSSSCEEEESTTS--------SCCCEEEEECCTTB--CTTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTE
T ss_pred cCCCceEEEeCCCC--------CCCCEEEEEecCCC--CHHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCc
Confidence 34556666666643 22389999999843 33456667777765 999999998763221222211000 00
Q ss_pred ----CccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 550 ----WGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 550 ----~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.-....+|+.+.++++.++..+|++||+|+|+|+||++++.++ .+|++++++|+.+|..+
T Consensus 83 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~ 147 (223)
T 3b5e_A 83 FEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPV 147 (223)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccC
Confidence 0012356777778887776457899999999999999999998 88999999999999764
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.17 E-value=7.7e-09 Score=106.67 Aligned_cols=257 Identities=12% Similarity=0.075 Sum_probs=132.1
Q ss_pred ceEEEeCC--EEEEEeCC---CCcE--EEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCce
Q 006979 148 GAFRIFGD--TVIFSNYK---DQRL--YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 148 ~~~~~s~d--~l~f~~~~---~~~l--~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~ 220 (623)
...++++| .|++.... ++.| |.++.+++ ..+++..... .........+ ||++|++.....
T Consensus 53 ~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g--~~~~~~~~~~-~~~~p~~~~~--dg~~l~~~~~~~-------- 119 (361)
T 3scy_A 53 SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG--TLHLLNTQKT-MGADPCYLTT--NGKNIVTANYSG-------- 119 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT--EEEEEEEEEC-SSSCEEEEEE--CSSEEEEEETTT--------
T ss_pred ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC--cEEEeeEecc-CCCCcEEEEE--CCCEEEEEECCC--------
Confidence 34566655 56666552 3556 45555444 4444432100 0111222334 888877654322
Q ss_pred eEEEEEEcCC-CCcccceec-c-cCCC---------cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCc---
Q 006979 221 TEIVAIALNG-QNIQEPKVL-V-SGSD---------FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD--- 285 (623)
Q Consensus 221 ~~L~~idl~~-g~~~~~~~l-~-~~~~---------~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~--- 285 (623)
..+.+++++. +........ . .+.. ......|||||++|++.... ...|++++++..+.
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-------~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-------TDQIHKFNINPNANADN 192 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-------TTEEEEEEECTTCCTTT
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-------CCEEEEEEEcCCCCccc
Confidence 4577778764 321111111 1 1111 11346899999999877532 23577777765431
Q ss_pred ---eee----eEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcc
Q 006979 286 ---VYK----RVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINS 358 (623)
Q Consensus 286 ---~~~----~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~ 358 (623)
+.. ........ ..+..+.|+|||+.+|+.+...+ .|.+++.++++.+.+.......... .+...
T Consensus 193 ~~~l~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~~~--~v~v~~~~~g~~~~~~~~~~~~~~~---~~~~~ 263 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVAPG----SGPRHLIFNSDGKFAYLINEIGG--TVIAFRYADGMLDEIQTVAADTVNA---QGSGD 263 (361)
T ss_dssp CCCCEEEEEEEEEECCTT----CCEEEEEECTTSSEEEEEETTTC--EEEEEEEETTEEEEEEEEESCSSCC---CCEEE
T ss_pred ccceeecccccceecCCC----CCCeEEEEcCCCCEEEEEcCCCC--eEEEEEecCCceEEeEEEecCCCCC---CCccc
Confidence 111 12222222 34557899999995555554234 4566666677665544211110100 01122
Q ss_pred eeEEeecCCCCEEEEEEEE-CCeEEEEEEeCCCCceeecccC--CcceEe--eeecCCEEEEEEecCCCCCeEEEEEcCC
Q 006979 359 YEIIQSHGEKNLIACSYRQ-NGRSYLGILDDFGHSLSLLDIP--FTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 359 ~~~l~~s~~~~~l~~~~~~-~g~~~L~~~d~~~~~~~~lt~~--~~~v~~--~~~~~~~~~~~~~s~~~~~~ly~~~l~~ 433 (623)
+.+ +|+++.||++... ++.-.+|.++..+++++.+..- ...... ++++++++++... ....-.+|.+++++
T Consensus 264 i~~---spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~-~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 264 IHL---SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR-DTNVIQIFERDQAT 339 (361)
T ss_dssp EEE---CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET-TTTEEEEEEECTTT
T ss_pred EEE---CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC-CCCCEEEEEEECCC
Confidence 333 3488888776655 5677788787667776544321 112222 3777777766543 33334577788878
Q ss_pred Ccce
Q 006979 434 HKLK 437 (623)
Q Consensus 434 ~~~~ 437 (623)
++++
T Consensus 340 g~~~ 343 (361)
T 3scy_A 340 GLLT 343 (361)
T ss_dssp CCEE
T ss_pred CcEe
Confidence 8753
No 147
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.16 E-value=1.4e-09 Score=109.88 Aligned_cols=255 Identities=10% Similarity=0.004 Sum_probs=146.0
Q ss_pred HHHHhccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccC-CCCCccceeeeecCCceEEEeCC-EE
Q 006979 81 ADVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDIT-PKEYAVRTTAQEYGGGAFRIFGD-TV 157 (623)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~-p~~~~~r~~~~~~g~~~~~~s~d-~l 157 (623)
++.+.......+++.|+| ++.+||++... ++ |++++.. ++.+.+. +.. ......++++ .+
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~---~~--i~~~~~~--g~~~~~~~~~~----------~~~gl~~d~dG~l 99 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVG---RR--VLGWRED--GTVDVLLDATA----------FTNGNAVDAQQRL 99 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTT---TE--EEEEETT--SCEEEEEESCS----------CEEEEEECTTSCE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCC---CE--EEEEeCC--CCEEEEeCCCC----------ccceeeECCCCCE
Confidence 444555555567899999 77899998653 43 5666553 2322221 111 0123445544 56
Q ss_pred EEEeCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCCCCCEEEEEEe------cc---CCCCCCceeEEEEEE
Q 006979 158 IFSNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPRFNRYVTVRE------DR---RQDALNSTTEIVAIA 227 (623)
Q Consensus 158 ~f~~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sPdG~~l~~v~~------~~---~~~~~~~~~~L~~id 227 (623)
++.....+.|++++.+ + ..+.+... .+......++..++|||+.+ ++.. +. ..........||++|
T Consensus 100 ~v~~~~~~~v~~~~~~-g--~~~~~~~~~~~~~~~~~~~i~~d~dG~l~-~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 100 VHCEHGRRAITRSDAD-G--QAHLLVGRYAGKRLNSPNDLIVARDGAIW-FTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp EEEETTTTEEEEECTT-S--CEEEEECEETTEECSCCCCEEECTTSCEE-EECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred EEEECCCCEEEEECCC-C--CEEEEEeccCCCccCCCCCEEECCCCCEE-EeCcCCCccccccccccccccCCCeEEEEc
Confidence 6665555679999986 5 45555432 11111235678999999743 3210 00 000011237899999
Q ss_pred cCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce
Q 006979 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (623)
.++++ .+.+. +.......+|||||++|++...... +.....|+++++++++ +...+.+.... . ..+..+.
T Consensus 176 ~~~g~---~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~--~~~~~~i~~~~~~~~~-l~~~~~~~~~~-~--~~pdgi~ 245 (305)
T 3dr2_A 176 PDGSP---LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQ--GHGSVEITAFAWRDGA-LHDRRHFASVP-D--GLPDGFC 245 (305)
T ss_dssp SSSCC---CEEEE-EESSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTE-EEEEEEEECCS-S--SCCCSEE
T ss_pred CCCCc---EEEEe-cCCCCcceEEcCCCCEEEEEecCCc--CCCCCEEEEEEecCCC-ccCCeEEEECC-C--CCCCeEE
Confidence 98887 55555 4444566789999999988764321 0012569999998664 33344443322 1 4556889
Q ss_pred eCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 308 ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
+++||+++ ++.. . .|+++++++.....+.... ... .+.|- ++++.|++++. ..||+++
T Consensus 246 ~d~~G~lw-v~~~-~---gv~~~~~~g~~~~~~~~~~-~~~---------~~~f~---~d~~~L~it~~----~~l~~~~ 303 (305)
T 3dr2_A 246 VDRGGWLW-SSSG-T---GVCVFDSDGQLLGHIPTPG-TAS---------NCTFD---QAQQRLFITGG----PCLWMLP 303 (305)
T ss_dssp ECTTSCEE-ECCS-S---EEEEECTTSCEEEEEECSS-CCC---------EEEEC---TTSCEEEEEET----TEEEEEE
T ss_pred ECCCCCEE-EecC-C---cEEEECCCCCEEEEEECCC-cee---------EEEEe---CCCCEEEEEcC----CeEEEEE
Confidence 99999854 4443 2 3899999665555554321 122 22222 27777887763 2577776
Q ss_pred C
Q 006979 388 D 388 (623)
Q Consensus 388 ~ 388 (623)
+
T Consensus 304 ~ 304 (305)
T 3dr2_A 304 L 304 (305)
T ss_dssp C
T ss_pred C
Confidence 4
No 148
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.15 E-value=8.8e-11 Score=119.58 Aligned_cols=114 Identities=21% Similarity=0.167 Sum_probs=90.5
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECC--------CCCCCCchhHHHh
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY--------GGSTGYGREFRER 545 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~--------rGs~~~g~~~~~~ 545 (623)
.+.+.+|.|++ .++.|+||.+||+. + ...+||+++.+|+ +|+.|+|. |.+.
T Consensus 124 sf~~~i~lP~g-------~~P~Pvii~~~~~~-------~------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~l 182 (433)
T 4g4g_A 124 SFSASIRKPSG-------AGPFPAIIGIGGAS-------I------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDL 182 (433)
T ss_dssp EEEEEEECCSS-------SCCEEEEEEESCCC-------S------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHH
T ss_pred EEEEEEECCCC-------CCCccEEEEECCCc-------c------ccCCCeEEEEeCCcccccccCCCcCCccc-cccc
Confidence 35889999976 57789999999751 1 1568999999997 56667887 4432
Q ss_pred h--ccCCccchH--HHHHHHHHHHHh----CCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCC
Q 006979 546 L--LGRWGIVDV--NDCCSCATFLVG----SGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVS 608 (623)
Q Consensus 546 ~--~~~~g~~~~--~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~ 608 (623)
. ...||.... =|+..+++||.. ++.||++||+|+|+|+||..+++++...++|+++|+..+.+
T Consensus 183 y~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 183 FGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVDRIALTIPQESGA 253 (433)
T ss_dssp HCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCT
T ss_pred cCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCCceEEEEEecCCC
Confidence 2 235665433 389999999999 88999999999999999999999997777999999997643
No 149
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.13 E-value=7.8e-11 Score=108.19 Aligned_cols=108 Identities=8% Similarity=-0.038 Sum_probs=78.6
Q ss_pred CCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 572 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 572 (623)
++.|+||++||.........+....+.|+++||.|+.+|+||.|..... .......+++.++++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~-------~~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDL-------GQLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGG-------CTTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-------CCCCCHHHHHHHHHHHHHhcC--C
Confidence 4568999999986443322344678889999999999999985443211 111122455566677777653 4
Q ss_pred CCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 573 EKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
.++++++|+|+||++++.++ .+| ++++|..+|..+..
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~ 110 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMG 110 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBT
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcc
Confidence 57999999999999999999 667 99999999987754
No 150
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.13 E-value=8.2e-11 Score=117.33 Aligned_cols=147 Identities=14% Similarity=0.087 Sum_probs=95.3
Q ss_pred CCCCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHc-CceEEEEECCCCC
Q 006979 457 YFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGS 535 (623)
Q Consensus 457 ~~~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~-~G~~v~~~d~rGs 535 (623)
.+...+.+.+.+...+..+..++|.|.+ |++ .+++|+|++.||+.... .......+.+++ .+.+|+.+++++.
T Consensus 9 ~~~~~~~~~~~S~~~~~~~~~~vylP~~--y~~--~~~yPvly~l~G~~~~~--~~~~~~~~~l~~~~~~ivV~v~~~~~ 82 (278)
T 2gzs_A 9 VFYHFSATSFDSVDGTRHYRVWTAVPNT--TAP--ASGYPILYMLDGNAVMD--RLDDELLKQLSEKTPPVIVAVGYQTN 82 (278)
T ss_dssp SSEEEEEEEEECTTSSCEEEEEEEEESS--CCC--TTCEEEEEESSHHHHHH--HCCHHHHHHHTTSCCCEEEEEEESSS
T ss_pred CCCceEEEEEEcCCCCceEEEEEECCCC--CCC--CCCCCEEEEeeChhHHH--HHHHHHHHHhccCCCeEEEEEcCCCC
Confidence 3456777888876236789999999987 544 57899987777763211 111223455655 6888888998764
Q ss_pred CCCc-----hhHHHhh-c-----------cCCcc-chHHHHH--HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC
Q 006979 536 TGYG-----REFRERL-L-----------GRWGI-VDVNDCC--SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF 594 (623)
Q Consensus 536 ~~~g-----~~~~~~~-~-----------~~~g~-~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~ 594 (623)
..+. .+|.... . ...+. ..+.+.+ ..+.++.++..+|++|++|+|+||||++++.++ .
T Consensus 83 ~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~- 161 (278)
T 2gzs_A 83 LPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS- 161 (278)
T ss_dssp SSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-
T ss_pred CcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-
Confidence 3221 1121111 0 00111 1222222 234455566668999999999999999999999 8
Q ss_pred CCceeEEEecccCCCH
Q 006979 595 RDTFKAGASLYGVSIP 610 (623)
Q Consensus 595 ~~~f~a~v~~~g~~d~ 610 (623)
|++|+++++.+|...+
T Consensus 162 p~~f~~~~~~s~~~~~ 177 (278)
T 2gzs_A 162 SSYFRSYYSASPSLGR 177 (278)
T ss_dssp CSSCSEEEEESGGGST
T ss_pred ccccCeEEEeCcchhc
Confidence 9999999999998654
No 151
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.13 E-value=2.2e-08 Score=101.23 Aligned_cols=267 Identities=8% Similarity=0.031 Sum_probs=151.3
Q ss_pred cCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCC
Q 006979 87 ASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKD 164 (623)
Q Consensus 87 ~~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~ 164 (623)
....+..+.|+| +..++... +|...+|..... .....+.... ..-+...+.+..++++ ..+++...+
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~~~~--~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d 118 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHP--GNKSPVSQLD----CLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-----BSEEEEEETTST--TCCSCSEEEE----CSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred CCCceEEEEEecCCcEEEEcC-----CCeEEEEECCCC--Cceeeeeccc----ccCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 345567889998 55444332 377777766543 1111111000 0001112345566655 445555567
Q ss_pred CcEEEEeCCCCCCCc---eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc
Q 006979 165 QRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS 241 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~---~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~ 241 (623)
+.|.++|+.++ .. ..+... ........|+|+++.++....+ ..+.++|+.+++. ...+..
T Consensus 119 ~~i~~~d~~~~--~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d---------g~v~~~d~~~~~~--~~~~~~ 181 (337)
T 1gxr_A 119 STLSIWDLAAP--TPRIKAELTSS----APACYALAISPDSKVCFSCCSD---------GNIAVWDLHNQTL--VRQFQG 181 (337)
T ss_dssp SEEEEEECCCC----EEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTEE--EEEECC
T ss_pred CcEEEEECCCC--CcceeeecccC----CCceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCce--eeeeec
Confidence 88999999876 32 222221 2345678899999988876543 4588999988762 333443
Q ss_pred CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCC
Q 006979 242 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRK 321 (623)
Q Consensus 242 ~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~ 321 (623)
.........|+|||++|+....+ ..|+++|+..+. ....+. .. ..+..+.|+|||+++++...
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~---~~~~~~-~~----~~v~~~~~s~~~~~l~~~~~- 244 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLD--------NTVRSWDLREGR---QLQQHD-FT----SQIFSLGYCPTGEWLAVGME- 244 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTE---EEEEEE-CS----SCEEEEEECTTSSEEEEEET-
T ss_pred ccCceEEEEECCCCCEEEEEecC--------CcEEEEECCCCc---eEeeec-CC----CceEEEEECCCCCEEEEEcC-
Confidence 34455668899999988876532 358899988763 222222 22 35668899999995555544
Q ss_pred CCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCc
Q 006979 322 NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFT 401 (623)
Q Consensus 322 ~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~ 401 (623)
++ .|..+|..+++...+......+....|.+ +++.++ +...+|. |.++|+.+++.........
T Consensus 245 ~~--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~~l~-~~~~dg~--i~~~~~~~~~~~~~~~~~~ 307 (337)
T 1gxr_A 245 SS--NVEVLHVNKPDKYQLHLHESCVLSLKFAY------------CGKWFV-STGKDNL--LNAWRTPYGASIFQSKESS 307 (337)
T ss_dssp TS--CEEEEETTSSCEEEECCCSSCEEEEEECT------------TSSEEE-EEETTSE--EEEEETTTCCEEEEEECSS
T ss_pred CC--cEEEEECCCCCeEEEcCCccceeEEEECC------------CCCEEE-EecCCCc--EEEEECCCCeEEEEecCCC
Confidence 34 46667777776655544333333333432 666554 4445564 5556777666543333333
Q ss_pred ceEee--eecCCEEEE
Q 006979 402 DIDNI--TLGNDCLFV 415 (623)
Q Consensus 402 ~v~~~--~~~~~~~~~ 415 (623)
.+..+ +++++.++.
T Consensus 308 ~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 308 SVLSCDISVDDKYIVT 323 (337)
T ss_dssp CEEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCEEEE
Confidence 44444 555554443
No 152
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.12 E-value=2.1e-11 Score=133.09 Aligned_cols=127 Identities=19% Similarity=0.194 Sum_probs=87.4
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcC-CHHhHHHHc-CceEEEEECCC-CCCCCchhHHHhhccCCc
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYG-GSTGYGREFRERLLGRWG 551 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~-~~~~~~~a~-~G~~v~~~d~r-Gs~~~g~~~~~~~~~~~g 551 (623)
+...+|.|+... ++++|+||++|||+........ ......|++ +|++|+.+||| |.-||+... ......+
T Consensus 97 l~l~v~~P~~~~-----~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~~~~ 169 (543)
T 2ha2_A 97 LYLNVWTPYPRP-----ASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSREAPG 169 (543)
T ss_dssp CEEEEEEESSCC-----SSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSSCCS
T ss_pred CeEEEeecCCCC-----CCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--CCCCCCC
Confidence 445566676421 4568999999999743333221 233456765 79999999999 322222210 0011223
Q ss_pred cchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHhcC---CCceeEEEecccCC
Q 006979 552 IVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVS 608 (623)
Q Consensus 552 ~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~---~~~f~a~v~~~g~~ 608 (623)
...+.|+.+|++|+.++. ..|++||.|+|+|+||++++.++.. +.+|+++|+.+|..
T Consensus 170 n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 170 NVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 345899999999998752 2799999999999999999888733 57899999999953
No 153
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.12 E-value=3e-08 Score=100.31 Aligned_cols=243 Identities=8% Similarity=-0.013 Sum_probs=145.1
Q ss_pred CCceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 006979 146 GGGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 146 g~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L 223 (623)
.+.+..++++ .+++... ++.|.++++.++ .....+... ............|+|+|+.|+....+ ..|
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i 121 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHP-GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---------STL 121 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTST-TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---------SEE
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCC-CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---------CcE
Confidence 3556666666 4444444 788999999765 112222110 00113456678899999988876543 568
Q ss_pred EEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
.++|+.+++......+...........|+|||+.|+....+. .|+++|+.++. ....+.... ..+
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~v~~~d~~~~~---~~~~~~~~~----~~i 186 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------NIAVWDLHNQT---LVRQFQGHT----DGA 186 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE---EEEEECCCS----SCE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC--------cEEEEeCCCCc---eeeeeeccc----Cce
Confidence 889998775211223333344456678999999888765332 38888988762 333444433 456
Q ss_pred cCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 304 TEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
....|+|||++++.... ++ .|..+|+.+++..........+....|. |+++.++... .++. |
T Consensus 187 ~~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~v~~~~~s------------~~~~~l~~~~-~~~~--i 248 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGL-DN--TVRSWDLREGRQLQQHDFTSQIFSLGYC------------PTGEWLAVGM-ESSN--V 248 (337)
T ss_dssp EEEEECTTSSEEEEEET-TS--EEEEEETTTTEEEEEEECSSCEEEEEEC------------TTSSEEEEEE-TTSC--E
T ss_pred EEEEECCCCCEEEEEec-CC--cEEEEECCCCceEeeecCCCceEEEEEC------------CCCCEEEEEc-CCCc--E
Confidence 78899999985555544 34 4667788777654444332233333333 2666666544 3443 6
Q ss_pred EEEeCCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 384 GILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 384 ~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+++|+.+++...+......+..+ +++++.++ ++.. ...+..+++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~---dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFV-STGK---DNLLNAWRTPYGAS 299 (337)
T ss_dssp EEEETTSSCEEEECCCSSCEEEEEECTTSSEEE-EEET---TSEEEEEETTTCCE
T ss_pred EEEECCCCCeEEEcCCccceeEEEECCCCCEEE-EecC---CCcEEEEECCCCeE
Confidence 66788877776665555556555 55666554 3332 24678888877653
No 154
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.12 E-value=3.1e-10 Score=113.20 Aligned_cols=141 Identities=15% Similarity=0.144 Sum_probs=87.9
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH---HhHHHHcCceEEEEECCCCCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGST 536 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~---~~~~~a~~G~~v~~~d~rGs~ 536 (623)
+.+.+++.+...+.++..++ .| . . .|+||++||.+.......|.. ..++++++||+|+.+|.+|++
T Consensus 5 ~~~~~~~~s~~~~~~~~v~~-~p-~-------~--~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~ 73 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQF-QG-G-------G--PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSS 73 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEE-EC-C-------S--SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTC
T ss_pred eEEEEEEECcccCceeEEEE-cC-C-------C--CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCc
Confidence 34566666653566777553 23 2 2 258999999853122222222 335678889999999998754
Q ss_pred CCchhHHHhh-ccCCccchHHHH--HHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 537 GYGREFRERL-LGRWGIVDVNDC--CSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 537 ~~g~~~~~~~-~~~~g~~~~~D~--~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
.|........ .+.......++. .+++.++.++-.++++|++|+|+||||++++.++ ++|++|+++|+.+|..++.
T Consensus 74 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 74 FYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp TTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred cccCCCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccccc
Confidence 4421000000 000011223332 2445555543346778999999999999999998 8999999999999988754
No 155
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.12 E-value=6.9e-11 Score=127.56 Aligned_cols=128 Identities=21% Similarity=0.285 Sum_probs=90.1
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCc-eEEEEECCC----CCCCCchhHHHhhcc
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRG-WAFVDVNYG----GSTGYGREFRERLLG 548 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G-~~v~~~d~r----Gs~~~g~~~~~~~~~ 548 (623)
++..+|.|.. .+++.|+||++|||+...... ........|+++| ++|+.+||| |.+..+.... ....
T Consensus 85 l~l~v~~P~~------~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~-~~~~ 157 (498)
T 2ogt_A 85 LYLNIWSPAA------DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFG-EAYA 157 (498)
T ss_dssp CEEEEEESCS------SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTC-GGGT
T ss_pred cEEEEEecCC------CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhcc-cccc
Confidence 4555667753 156789999999997433222 2223467788887 999999999 3222221100 0112
Q ss_pred CCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHhcC---CCceeEEEecccCCC
Q 006979 549 RWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVSI 609 (623)
Q Consensus 549 ~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~---~~~f~a~v~~~g~~d 609 (623)
..+...+.|+.++++|+.++. ..|++||.|+|+|+||++++.++.. ..+|+++|+.+|..+
T Consensus 158 ~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 158 QAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 234456899999999998752 2799999999999999999888732 568999999999876
No 156
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.12 E-value=2.3e-10 Score=109.74 Aligned_cols=114 Identities=17% Similarity=0.081 Sum_probs=82.4
Q ss_pred CCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEE--CCCCCCCCchhHHHhhccCCc----cchHHHHHHHHHHHH
Q 006979 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV--NYGGSTGYGREFRERLLGRWG----IVDVNDCCSCATFLV 566 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~--d~rGs~~~g~~~~~~~~~~~g----~~~~~D~~~~~~~l~ 566 (623)
++.|+||++||++. ....+....+.|++ ||.|+.+ |++|.|.... +.....+.+. ..+.+|+.+.++++.
T Consensus 36 ~~~~~vv~~HG~~~--~~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 111 (226)
T 2h1i_A 36 TSKPVLLLLHGTGG--NELDLLPLAEIVDS-EASVLSVRGNVLENGMPRF-FRRLAEGIFDEEDLIFRTKELNEFLDEAA 111 (226)
T ss_dssp TTSCEEEEECCTTC--CTTTTHHHHHHHHT-TSCEEEECCSEEETTEEES-SCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCC--ChhHHHHHHHHhcc-CceEEEecCcccCCcchhh-ccccCccCcChhhHHHHHHHHHHHHHHHH
Confidence 46799999999953 34456677888888 9999999 7777553210 0000001111 123456667777777
Q ss_pred hCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 567 GSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 567 ~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
++..+|+++|+++|+|+||++++.++ .+|++++++|+.+|..+.
T Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~ 156 (226)
T 2h1i_A 112 KEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPR 156 (226)
T ss_dssp HHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC
T ss_pred hhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCc
Confidence 77667899999999999999999998 889999999999998764
No 157
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.11 E-value=6.3e-11 Score=128.52 Aligned_cols=131 Identities=20% Similarity=0.177 Sum_probs=89.0
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHH-HcCceEEEEECCC-CCCCCchhHHHhhccCC
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYW-TSRGWAFVDVNYG-GSTGYGREFRERLLGRW 550 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~-a~~G~~v~~~d~r-Gs~~~g~~~~~~~~~~~ 550 (623)
.+...+|.|.+.. .++++|+||++|||+...... .+....... .++|++|+.+||| |.-||+........+ .
T Consensus 85 cl~l~v~~P~~~~----~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~-~ 159 (522)
T 1ukc_A 85 CLFINVFKPSTAT----SQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG-D 159 (522)
T ss_dssp CCEEEEEEETTCC----TTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-C
T ss_pred CCEEEEEECCCCC----CCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccC-C
Confidence 3666778886521 146789999999997543322 233222111 2579999999999 332333321111111 2
Q ss_pred ccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cC----CCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AF----RDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~----~~~f~a~v~~~g~~d 609 (623)
+...+.|+.+|++|+.++. -.|++||.|+|+|+||++++.++ .. ..+|+++|+.+|..+
T Consensus 160 ~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 160 LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 2345899999999998752 36999999999999999888776 43 579999999999754
No 158
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.11 E-value=4e-10 Score=111.68 Aligned_cols=118 Identities=15% Similarity=0.257 Sum_probs=82.7
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHh
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 545 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~ 545 (623)
+... +|..++...+.|.+ .|.||++||.+. ....|...+..|+++||.|+++|+||.|.+...
T Consensus 4 ~~~~-~g~~l~y~~~g~~~----------~~~vvllHG~~~--~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~---- 66 (276)
T 1zoi_A 4 VTTK-DGVQIFYKDWGPRD----------APVIHFHHGWPL--SADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQV---- 66 (276)
T ss_dssp EECT-TSCEEEEEEESCTT----------SCEEEEECCTTC--CGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC----
T ss_pred EECC-CCcEEEEEecCCCC----------CCeEEEECCCCc--chhHHHHHHHHHHhCCCEEEEecCCCCCCCCCC----
Confidence 3444 78888766554422 257999999853 334677788899999999999999997765431
Q ss_pred hccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-CCceeEEEecccC
Q 006979 546 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~ 607 (623)
...+.. ...+|+.+.++++ +.+++.++||||||.+++.++ .+ |++++++|...+.
T Consensus 67 -~~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 67 -WDGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp -SSCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 111111 1245566666655 236899999999999998855 66 9999999988763
No 159
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.11 E-value=7.1e-10 Score=109.63 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=82.0
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHh
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 545 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~ 545 (623)
+.+. +|..++...+.|.+ .|.||++||.+.. ...|...+..|+++||.|+++|+||.|.+...
T Consensus 3 ~~~~-~g~~l~y~~~g~~~----------~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~---- 65 (275)
T 1a88_A 3 VTTS-DGTNIFYKDWGPRD----------GLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQP---- 65 (275)
T ss_dssp EECT-TSCEEEEEEESCTT----------SCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC----
T ss_pred EEcc-CCCEEEEEEcCCCC----------CceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCcCCCCCCC----
Confidence 3444 78888766554422 2578999998533 34567778899999999999999997665331
Q ss_pred hccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-CCceeEEEecccC
Q 006979 546 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~ 607 (623)
...+.. ...+|+.+.++++. .+++.++||||||.+++.++ .+ |++++++|...+.
T Consensus 66 -~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 66 -STGHDMDTYAADVAALTEALD------LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp -SSCCSHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHHcC------CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 111111 12355555555542 36899999999999998755 65 9999999988764
No 160
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.10 E-value=3.7e-10 Score=110.71 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=78.2
Q ss_pred CCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 572 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 572 (623)
...|.||++||.+. ....|...+..|+++||.|+++|+||.|....... .....++..+.+..++++- -+
T Consensus 10 ~~~~~vvllHG~~~--~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~l~~l-~~ 79 (267)
T 3sty_A 10 FVKKHFVLVHAAFH--GAWCWYKIVALMRSSGHNVTALDLGASGINPKQAL-------QIPNFSDYLSPLMEFMASL-PA 79 (267)
T ss_dssp CCCCEEEEECCTTC--CGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGG-------GCCSHHHHHHHHHHHHHTS-CT
T ss_pred CCCCeEEEECCCCC--CcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCC-------ccCCHHHHHHHHHHHHHhc-CC
Confidence 44689999999953 34467788899999999999999999766544310 1123445544444444331 13
Q ss_pred CCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 573 EKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.+++.|+|||+||.+++.++ .+|++++++|...+..
T Consensus 80 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 116 (267)
T 3sty_A 80 NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116 (267)
T ss_dssp TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCC
T ss_pred CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCC
Confidence 57999999999999999999 8999999999888754
No 161
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.10 E-value=1.1e-10 Score=114.88 Aligned_cols=110 Identities=18% Similarity=0.309 Sum_probs=81.4
Q ss_pred EEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHH
Q 006979 477 AYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVN 556 (623)
Q Consensus 477 ~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~ 556 (623)
+.+|.|.... . .+++.|+||++||++. ....+...+..|+++||.|+.+|+||+. ..+
T Consensus 34 ~~~~~p~~~~--~-~g~~~p~vv~~HG~~~--~~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~ 91 (258)
T 2fx5_A 34 CRIYRPRDLG--Q-GGVRHPVILWGNGTGA--GPSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGR 91 (258)
T ss_dssp EEEEEESSTT--G-GGCCEEEEEEECCTTC--CGGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSH
T ss_pred EEEEeCCCCc--c-cCCCceEEEEECCCCC--CchhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHH
Confidence 5677776411 0 0236799999999854 3346677889999999999999999641 124
Q ss_pred HHHHHHHHHHh---------CCCCCCCceEEEEcChHHHHHHHHhcCCCceeEEEecccCCC
Q 006979 557 DCCSCATFLVG---------SGKADEKRLCITGGSAGGYTTLAALAFRDTFKAGASLYGVSI 609 (623)
Q Consensus 557 D~~~~~~~l~~---------~~~~d~~rv~i~G~S~GG~~~~~~~~~~~~f~a~v~~~g~~d 609 (623)
|+..+++++.+ ...+|.+||+++|||+||++++.++ +++.++++|..+|...
T Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a-~~~~v~~~v~~~~~~~ 152 (258)
T 2fx5_A 92 EMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG-QDTRVRTTAPIQPYTL 152 (258)
T ss_dssp HHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT-TSTTCCEEEEEEECCS
T ss_pred HHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc-cCcCeEEEEEecCccc
Confidence 55566666654 2346788999999999999999887 4567999999888654
No 162
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.10 E-value=1.4e-10 Score=121.61 Aligned_cols=138 Identities=17% Similarity=0.111 Sum_probs=91.0
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHH----cCce---EEEEECCCCCCCC
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWT----SRGW---AFVDVNYGGSTGY 538 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a----~~G~---~v~~~d~rGs~~~ 538 (623)
+... +|..+++..+.|.+.. ..++.++.|.||++||.+.. ...|...+..|+ +.|| .|+++|+|| +
T Consensus 25 ~~~~-dg~~l~~~~~g~~~~~-~~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G---~ 97 (398)
T 2y6u_A 25 LCAT-DRLELTYDVYTSAERQ-RRSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN---H 97 (398)
T ss_dssp SSTT-CCCEEEEEEEEESCTT-TCCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTT---S
T ss_pred ccCC-CceEEEEEEEecCCCC-CCCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCC---C
Confidence 4455 8999999888775410 00012345899999998543 335666778888 4599 999999999 4
Q ss_pred chhHHHhhc---cCCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 539 GREFRERLL---GRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 539 g~~~~~~~~---~~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
|.+-..... ..+. ....+|+.+.++++...-.+++.++.++||||||++++.++ .+|++++++|..+|....
T Consensus 98 G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 174 (398)
T 2y6u_A 98 GDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVIT 174 (398)
T ss_dssp HHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC
T ss_pred CCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccc
Confidence 544332111 0111 12244555555544321124455699999999999999988 899999999999987653
No 163
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.09 E-value=4.7e-10 Score=106.58 Aligned_cols=116 Identities=13% Similarity=0.073 Sum_probs=80.3
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHc--CceEEEEECCCCC-----CCC-chhHHH-hhcc---CCc----cchH
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGGS-----TGY-GREFRE-RLLG---RWG----IVDV 555 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~--~G~~v~~~d~rGs-----~~~-g~~~~~-~~~~---~~g----~~~~ 555 (623)
+++.|+||++||.+ .....+...++.|++ +||.|+.+|++|. .|+ +..|.+ ...+ ... ....
T Consensus 11 ~~~~~~vv~~HG~~--~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~ 88 (218)
T 1auo_A 11 KPADACVIWLHGLG--ADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSA 88 (218)
T ss_dssp SCCSEEEEEECCTT--CCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHH
T ss_pred CCCCcEEEEEecCC--CChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHH
Confidence 45679999999984 344457778888998 9999999997741 010 000000 0000 000 1124
Q ss_pred HHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhc--CCCceeEEEecccCCCH
Q 006979 556 NDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA--FRDTFKAGASLYGVSIP 610 (623)
Q Consensus 556 ~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~--~~~~f~a~v~~~g~~d~ 610 (623)
+|+.+.++++.+. .+|++||+++|+|+||++++.++. +|++++++|+.+|..++
T Consensus 89 ~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~ 144 (218)
T 1auo_A 89 KMVTDLIEAQKRT-GIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT 144 (218)
T ss_dssp HHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT
T ss_pred HHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC
Confidence 5666667777663 478899999999999999998874 68899999999998775
No 164
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.09 E-value=1.9e-08 Score=102.32 Aligned_cols=219 Identities=9% Similarity=0.021 Sum_probs=132.6
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ .++++...++.|.++|+.++ .....+... ........|+|||++|+....+ ..+.+
T Consensus 83 v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~-~~~~~~~~~----~~~~~~~~~spdg~~l~~g~~d---------g~v~i 148 (321)
T 3ow8_A 83 VVSVDISHTLPIAASSSLDAHIRLWDLENG-KQIKSIDAG----PVDAWTLAFSPDSQYLATGTHV---------GKVNI 148 (321)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECC----TTCCCCEEECTTSSEEEEECTT---------SEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCC-CEEEEEeCC----CccEEEEEECCCCCEEEEEcCC---------CcEEE
Confidence 445555555 56667777889999999876 233444432 2334568899999988775433 56888
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+++.+++. ...+..........+|||||++|+....+. .|.++|+.++. ....+.+.. ..+..
T Consensus 149 ~~~~~~~~--~~~~~~~~~~v~~~~~spdg~~lasg~~dg--------~i~iwd~~~~~---~~~~~~~h~----~~v~~ 211 (321)
T 3ow8_A 149 FGVESGKK--EYSLDTRGKFILSIAYSPDGKYLASGAIDG--------IINIFDIATGK---LLHTLEGHA----MPIRS 211 (321)
T ss_dssp EETTTCSE--EEEEECSSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE---EEEEECCCS----SCCCE
T ss_pred EEcCCCce--eEEecCCCceEEEEEECCCCCEEEEEcCCC--------eEEEEECCCCc---EEEEEcccC----CceeE
Confidence 89988762 233444445566788999999998776443 38888988762 334445444 56778
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEE-EeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
+.|+|||++++.... ++. |..+|..+++... +......+....|. |+++.| ++...++.-+|
T Consensus 212 l~~spd~~~l~s~s~-dg~--i~iwd~~~~~~~~~~~~h~~~v~~~~~s------------p~~~~l-~s~s~D~~v~i- 274 (321)
T 3ow8_A 212 LTFSPDSQLLVTASD-DGY--IKIYDVQHANLAGTLSGHASWVLNVAFC------------PDDTHF-VSSSSDKSVKV- 274 (321)
T ss_dssp EEECTTSCEEEEECT-TSC--EEEEETTTCCEEEEECCCSSCEEEEEEC------------TTSSEE-EEEETTSCEEE-
T ss_pred EEEcCCCCEEEEEcC-CCe--EEEEECCCcceeEEEcCCCCceEEEEEC------------CCCCEE-EEEeCCCcEEE-
Confidence 999999996555544 454 5556766665433 32222223223333 266654 45555666555
Q ss_pred EEeCCCCce-eecccCCcceEee--eecCCEEE
Q 006979 385 ILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLF 414 (623)
Q Consensus 385 ~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~ 414 (623)
+|+.+++. ..+......+..+ ++++..++
T Consensus 275 -wd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 275 -WDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp -EETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred -EeCCCCEEEEEEcCCCCcEEEEEECCCCCEEE
Confidence 46666554 3444334445555 55555544
No 165
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.08 E-value=2.1e-08 Score=101.97 Aligned_cols=261 Identities=14% Similarity=0.096 Sum_probs=144.2
Q ss_pred CCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCC--
Q 006979 88 SKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKD-- 164 (623)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~-- 164 (623)
...+..+.|+|++.+||+.... + .|++++..++ +.+.+.... ......++++++ .+++....+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~---~--~i~~~d~~~~-~~~~~~~~~--------~~~~~~i~~~~dg~l~v~~~~~~~ 109 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFE---G--NIFKINPETK-EIKRPFVSH--------KANPAAIKIHKDGRLFVCYLGDFK 109 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTT---C--EEEEECTTTC-CEEEEEECS--------SSSEEEEEECTTSCEEEEECTTSS
T ss_pred CccccCcEECCCCCEEEEECCC---C--EEEEEeCCCC-cEEEEeeCC--------CCCcceEEECCCCcEEEEeCCCCC
Confidence 3456788998866688877432 3 4677766533 333332111 011334555555 566665544
Q ss_pred --CcEEEEeCCCCCCCce-ecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc
Q 006979 165 --QRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS 241 (623)
Q Consensus 165 --~~l~~~d~~~g~~~~~-~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~ 241 (623)
+.|+++|++++ ..+ .+... .......++.++|+|+.++....... ......||++|.++++ .+.+..
T Consensus 110 ~~~~i~~~d~~~~--~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~---~~~~~~l~~~~~~~~~---~~~~~~ 179 (333)
T 2dg1_A 110 STGGIFAATENGD--NLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGYS---TNPLGGVYYVSPDFRT---VTPIIQ 179 (333)
T ss_dssp SCCEEEEECTTSC--SCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCBT---TBCCEEEEEECTTSCC---EEEEEE
T ss_pred CCceEEEEeCCCC--EEEEEEccC--ccCCcccceEECCCCCEEEEeccccc---cCCCceEEEEeCCCCE---EEEeec
Confidence 57999999876 444 33321 11345667889999975544322111 0123689999998776 555544
Q ss_pred CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCC-ceee--eEEEcCCCCCccccCcCceeCCCCcEEEEE
Q 006979 242 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG-DVYK--RVCVAGFDPTIVESPTEPKWSSKGELFFVT 318 (623)
Q Consensus 242 ~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~ 318 (623)
.........|+|||++|++.... ...|++++++..+ .+.. .......... ..+..+.+++||++++..
T Consensus 180 ~~~~~~~i~~~~dg~~l~v~~~~-------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 180 NISVANGIALSTDEKVLWVTETT-------ANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp EESSEEEEEECTTSSEEEEEEGG-------GTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBTTCCEEEEE
T ss_pred CCCcccceEECCCCCEEEEEeCC-------CCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECCCCCEEEEE
Confidence 33345567899999988877532 3359999986432 2111 1111111100 234567899999755544
Q ss_pred eCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC---CeEEEEEEeCCC
Q 006979 319 DRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN---GRSYLGILDDFG 390 (623)
Q Consensus 319 ~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~---g~~~L~~~d~~~ 390 (623)
.. ...|+++|+++...+.+.......+... ......+. ++++.||++...+ ....||+++...
T Consensus 251 ~~---~~~v~~~d~~g~~~~~~~~~~~~~g~~~---~~~~~~~~---~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 251 YG---QGRVLVFNKRGYPIGQILIPGRDEGHML---RSTHPQFI---PGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp ET---TTEEEEECTTSCEEEEEECTTGGGTCSC---BCCEEEEC---TTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred cC---CCEEEEECCCCCEEEEEEcCCCcccccc---CcceEEEC---CCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 32 2368888986544444432211000000 01223332 3777888877653 356788888653
No 166
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.08 E-value=1e-09 Score=108.32 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=78.8
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHh
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 545 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~ 545 (623)
+.+. +|..++...+. ..|.||++||.+.. ...|...+..|+++||.|+++|+||.|.+...
T Consensus 3 ~~~~-~g~~l~y~~~g------------~~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~---- 63 (273)
T 1a8s_A 3 FTTR-DGTQIYYKDWG------------SGQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRGHGRSSQP---- 63 (273)
T ss_dssp EECT-TSCEEEEEEES------------CSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC----
T ss_pred EecC-CCcEEEEEEcC------------CCCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCCCCCCCCC----
Confidence 3444 77777644331 12578999998543 34567778889999999999999997655321
Q ss_pred hccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-CCceeEEEecccC
Q 006979 546 LLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~ 607 (623)
...+.. ...+|+.+.++++ +.+++.++||||||.+++.++ .+ |++++++|...+.
T Consensus 64 -~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (273)
T 1a8s_A 64 -WSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp -SSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEccc
Confidence 111111 1234444444443 346899999999999998855 65 8999999988753
No 167
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.08 E-value=7.6e-08 Score=98.54 Aligned_cols=292 Identities=11% Similarity=0.064 Sum_probs=163.6
Q ss_pred ccCCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCC
Q 006979 86 GASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKD 164 (623)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~ 164 (623)
.....+..+.|+|++.++..-.. +|...+|..... +....+.. |...+.+..++++ ..+++...+
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~---~~~~~~~~--------h~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSK---DSSASVWYSLNG---ERLGTLDG--------HTGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEES---SSCEEEEETTTC---CEEEEECC--------CSSCEEEEEECTTSSEEEEEETT
T ss_pred EeeceEEEEEEcCCCCEEEEEeC---CCEEEEEeCCCc---hhhhhhhh--------cCCcEEEEEEcCCCCEEEEEeCC
Confidence 34456778899983333333322 466667755432 22222221 1222445566655 455565678
Q ss_pred CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc---------c
Q 006979 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ---------E 235 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~---------~ 235 (623)
+.|.++|+.++ .....+.. ........|+|+|+.+++...+... ....|.++|+..+... .
T Consensus 96 g~i~iwd~~~~-~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~~----~~g~i~~~d~~~~~~~~~~~~~~~~~ 165 (369)
T 3zwl_B 96 YSIKLWDVSNG-QCVATWKS-----PVPVKRVEFSPCGNYFLAILDNVMK----NPGSINIYEIERDSATHELTKVSEEP 165 (369)
T ss_dssp TEEEEEETTTC-CEEEEEEC-----SSCEEEEEECTTSSEEEEEECCBTT----BCCEEEEEEEEECTTTCCEEEECSSC
T ss_pred CeEEEEECCCC-cEEEEeec-----CCCeEEEEEccCCCEEEEecCCccC----CCCEEEEEEecCCccceeecccccce
Confidence 88999999876 22333332 3446678899999999887664211 1145777777654310 0
Q ss_pred ceecccCC--CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc
Q 006979 236 PKVLVSGS--DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (623)
Q Consensus 236 ~~~l~~~~--~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~ 313 (623)
...+.... .......|+|||+.|+....+ ..|+++|+..... ....+.... ..+..+.|+|||+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~--~~~~~~~~~----~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKYIIAGHKD--------GKISKYDVSNNYE--YVDSIDLHE----KSISDMQFSPDLT 231 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCEEEEEETT--------SEEEEEETTTTTE--EEEEEECCS----SCEEEEEECTTSS
T ss_pred eeeccCCcCccceeEEEEcCCCCEEEEEcCC--------CEEEEEECCCCcE--eEEEEecCC----CceeEEEECCCCC
Confidence 11111111 145567899999988876532 3589999987432 333444443 4567889999999
Q ss_pred EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC-----------CeEE
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN-----------GRSY 382 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~-----------g~~~ 382 (623)
+++.... ++ .|..+|..+++..........+....|.+ +++.+++....+ +...
T Consensus 232 ~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 232 YFITSSR-DT--NSFLVDVSTLQVLKKYETDCPLNTAVITP------------LKEFIILGGGQEAKDVTTTSANEGKFE 296 (369)
T ss_dssp EEEEEET-TS--EEEEEETTTCCEEEEEECSSCEEEEEECS------------SSSEEEEEECCC-------------CE
T ss_pred EEEEecC-Cc--eEEEEECCCCceeeeecCCCCceeEEecC------------CCceEEEeecCCCceEEEEecCCCcce
Confidence 5555544 34 46677887776554444333333334433 555555544322 2336
Q ss_pred EEEEeCCCCcee-ecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 006979 383 LGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (623)
Q Consensus 383 L~~~d~~~~~~~-~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~ 434 (623)
+.++|..+++.. .+......+..+ ++++..++ +++.. ..|..++++.+
T Consensus 297 i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d---g~v~iw~~~~~ 347 (369)
T 3zwl_B 297 ARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYA-SGGED---GFIRLHHFEKS 347 (369)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEETT---SEEEEEEECHH
T ss_pred eEEEecCCCcchhheecccCcEEEEEECCCCCEEE-EEcCC---CeEEEEECccc
Confidence 777887766554 344344455555 55555444 43322 45666676654
No 168
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.08 E-value=1.3e-09 Score=109.29 Aligned_cols=118 Identities=13% Similarity=0.047 Sum_probs=80.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCH-HhHHHHcCceEEEEECCCCCCCCchhHHHhhccC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL-SIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 549 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~-~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~ 549 (623)
+|..++...+-+.+ .|.||++||.+. ....|.. .+..|+++||.|+++|+||.|.+...- .....
T Consensus 9 ~g~~l~y~~~G~~~----------~~~vvllHG~~~--~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~--~~~~~ 74 (298)
T 1q0r_A 9 GDVELWSDDFGDPA----------DPALLLVMGGNL--SALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRD--FAAHP 74 (298)
T ss_dssp TTEEEEEEEESCTT----------SCEEEEECCTTC--CGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCC--TTTSC
T ss_pred CCeEEEEEeccCCC----------CCeEEEEcCCCC--CccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC--CCcCC
Confidence 68888766554321 257899999854 3345665 458899999999999999977654300 00111
Q ss_pred Ccc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 550 WGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 550 ~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+.. ...+|+.+.++++ +.+++.++|||+||.+++.++ .+|++++++|...+..
T Consensus 75 ~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 75 YGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 111 1134444444443 246899999999999999988 8999999999887654
No 169
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.07 E-value=6.7e-11 Score=113.79 Aligned_cols=119 Identities=14% Similarity=0.021 Sum_probs=84.2
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhh-------c
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERL-------L 547 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~-------~ 547 (623)
+..+++.|.+ +.|+||++||.+.. ...+...+..|+++||.|+.+|+||.|.......... .
T Consensus 13 ~~~~~~~~~~---------~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 81 (238)
T 1ufo_A 13 LSVLARIPEA---------PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEV 81 (238)
T ss_dssp EEEEEEEESS---------CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHH
T ss_pred EEEEEEecCC---------CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhH
Confidence 4445666642 46899999998533 3345566778889999999999999765432110000 0
Q ss_pred cCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 548 GRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 548 ~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
...-....+|+.++++++.+++. ++|+++|+|+||++++.++ .+|+.+++++...+.
T Consensus 82 ~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~ 139 (238)
T 1ufo_A 82 YRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSG 139 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCC
Confidence 00011346788899999987653 7999999999999999998 789888888877664
No 170
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.07 E-value=4e-08 Score=100.99 Aligned_cols=246 Identities=11% Similarity=0.002 Sum_probs=142.6
Q ss_pred ecCCceEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 006979 144 EYGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 144 ~~g~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L 223 (623)
+.++.+.+++++..+++...++.|.++|+.++ .....+......-...+....|+|||++|+....+ ..|
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~-~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---------~~i 151 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDEN-ETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---------ICI 151 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTT-SSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---------SCE
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCC-CceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---------CeE
Confidence 44566778888755556667888999999876 22222211000002346678899999988876554 458
Q ss_pred EEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
.+.|+.+++. +..+....+.+....|+||++.++.....+ ..|.+.|+..+.. ...+...... ..+
T Consensus 152 ~iwd~~~~~~--~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D-------~~v~iwd~~~~~~---~~~~~~~~~~--~~~ 217 (344)
T 4gqb_B 152 KVWDLAQQVV--LSSYRAHAAQVTCVAASPHKDSVFLSCSED-------NRILLWDTRCPKP---ASQIGCSAPG--YLP 217 (344)
T ss_dssp EEEETTTTEE--EEEECCCSSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTSSSC---EEECC----C--CCE
T ss_pred EEEECCCCcE--EEEEcCcCCceEEEEecCCCCCceeeeccc-------cccccccccccce---eeeeecceee--ccc
Confidence 8889988862 334444445566678999998665444332 2378889887642 2222211101 334
Q ss_pred cCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeE-EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeE
Q 006979 304 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (623)
Q Consensus 304 ~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~ 381 (623)
....|+|++. ++..... ++. |..+|..+++. ..+......+....|+ |++..++++...++.-
T Consensus 218 ~~~~~~p~~~~~l~sg~~-dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~fs------------p~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDE-NGT--VSLVDTKSTSCVLSSAVHSQCVTGLVFS------------PHSVPFLASLSEDCSL 282 (344)
T ss_dssp EEEEECSSCTTEEEEEET-TSE--EEEEESCC--CCEEEECCSSCEEEEEEC------------SSSSCCEEEEETTSCE
T ss_pred eeeeecCCCCcceEEecc-CCc--EEEEECCCCcEEEEEcCCCCCEEEEEEc------------cCCCeEEEEEeCCCeE
Confidence 5788999766 6655544 454 55567766653 3333222223222332 2776777777677765
Q ss_pred EEEEEeCCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCC
Q 006979 382 YLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 382 ~L~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~ 433 (623)
+| +|..++++..+......+..+ ++++..+++.++.. ..|...++..
T Consensus 283 ~v--wd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D---~~v~~w~v~~ 331 (344)
T 4gqb_B 283 AV--LDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWD---HQVVHHVVPT 331 (344)
T ss_dssp EE--ECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETT---SCEEEEECCC
T ss_pred EE--EECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCC---CeEEEEECCC
Confidence 55 588888776665444456665 66777777666532 2345555443
No 171
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=99.06 E-value=3.3e-11 Score=131.63 Aligned_cols=110 Identities=19% Similarity=0.199 Sum_probs=80.9
Q ss_pred CCEEEEecCCCCCcccCc-CCHHhHHHHcCceEEEEECCCCCC-CCchhHHHhhccCCccchHHHHHHHHHHHHhCC---
Q 006979 495 PPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNYGGST-GYGREFRERLLGRWGIVDVNDCCSCATFLVGSG--- 569 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~-~~~~~~~~a~~G~~v~~~d~rGs~-~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~--- 569 (623)
.|+||++|||........ .....+.|+++|++|+.+|||.+. |+.... .....+.....|+.++++|+.++-
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~---~~~~~~n~gl~D~~~al~wv~~~i~~f 191 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLN---STSVPGNAGLRDMVTLLKWVQRNAHFF 191 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCS---SSSCCSCHHHHHHHHHHHHHHHHTGGG
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCc---ccCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 899999999865333222 223456788899999999999521 111110 011234456899999999998752
Q ss_pred CCCCCceEEEEcChHHHHHHHHh-c--CCCceeEEEecccC
Q 006979 570 KADEKRLCITGGSAGGYTTLAAL-A--FRDTFKAGASLYGV 607 (623)
Q Consensus 570 ~~d~~rv~i~G~S~GG~~~~~~~-~--~~~~f~a~v~~~g~ 607 (623)
..|++||.|+|+|+||++++.++ . .+.+|+++|+.+|.
T Consensus 192 ggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 192 GGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred CCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 26999999999999999999888 3 36799999999986
No 172
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.05 E-value=1.4e-09 Score=106.29 Aligned_cols=118 Identities=12% Similarity=0.005 Sum_probs=81.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+ ..|.||++||.+.. ....|...++.|+++||.|+++|+||.|.+... ...+
T Consensus 10 ~g~~l~~~~~g~-----------~~~~vvllHG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-----~~~~ 72 (254)
T 2ocg_A 10 NGVQLHYQQTGE-----------GDHAVLLLPGMLGS-GETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPP-----DRDF 72 (254)
T ss_dssp TTEEEEEEEEEC-----------CSEEEEEECCTTCC-HHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSS-----CCCC
T ss_pred CCEEEEEEEecC-----------CCCeEEEECCCCCC-CccchHHHHHHHhhCCCeEEEECCCCCCCCCCC-----CCCC
Confidence 577777544321 13578999997433 123566778889999999999999997654321 1112
Q ss_pred ccc-hHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 551 GIV-DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 551 g~~-~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
... ..+|+.++++++.+.+ .+++.++|||+||.+++.++ .+|++++++|...+..
T Consensus 73 ~~~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (254)
T 2ocg_A 73 PADFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANA 129 (254)
T ss_dssp CTTHHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred ChHHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEecccc
Confidence 111 1244555555665543 46999999999999999999 8999999999887743
No 173
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.05 E-value=2.2e-09 Score=108.16 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=86.1
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchh
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 541 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~ 541 (623)
+...++. ++..++.+.+.+. ..|.||++||++... ..|...+..|++ ||.|+++|+||.+|....
T Consensus 46 ~~~~v~~--~~~~~~~~~~g~~----------~~~~vv~lHG~~~~~--~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~ 110 (306)
T 2r11_A 46 KSFYIST--RFGQTHVIASGPE----------DAPPLVLLHGALFSS--TMWYPNIADWSS-KYRTYAVDIIGDKNKSIP 110 (306)
T ss_dssp EEEEECC--TTEEEEEEEESCT----------TSCEEEEECCTTTCG--GGGTTTHHHHHH-HSEEEEECCTTSSSSCEE
T ss_pred ceEEEec--CCceEEEEeeCCC----------CCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEecCCCCCCCCCC
Confidence 4555555 4667776654332 247899999996433 346667778887 999999999997332211
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.......+|..+.+..+++. ++.+++.++|+|+||++++.++ .+|++++++|...|..+.
T Consensus 111 -------~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 171 (306)
T 2r11_A 111 -------ENVSGTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETF 171 (306)
T ss_dssp -------CSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBT
T ss_pred -------CCCCCCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCcccc
Confidence 01123345555555544443 2347999999999999999988 889999999999998754
No 174
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.04 E-value=1.7e-09 Score=106.78 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=78.3
Q ss_pred ecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhh
Q 006979 467 PTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERL 546 (623)
Q Consensus 467 ~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~ 546 (623)
.+. +|..++...+. ..|.||++||.+.. ...|...+..|+++||.|+++|+||.|.+...
T Consensus 4 ~~~-~g~~l~y~~~g------------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~----- 63 (274)
T 1a8q_A 4 TTR-DGVEIFYKDWG------------QGRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPV----- 63 (274)
T ss_dssp ECT-TSCEEEEEEEC------------SSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC-----
T ss_pred Ecc-CCCEEEEEecC------------CCceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCC-----
Confidence 444 77777654331 12579999998533 34566778889999999999999997655321
Q ss_pred ccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-CCceeEEEecccC
Q 006979 547 LGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGV 607 (623)
Q Consensus 547 ~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~ 607 (623)
...+.. ...+|+.+.++++ +.+++.++||||||.+++.++ .+ |++++++|...+.
T Consensus 64 ~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (274)
T 1a8q_A 64 WDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAI 121 (274)
T ss_dssp SSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCC
Confidence 111111 1134444444443 246899999999999998865 65 8999999988753
No 175
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.04 E-value=2.5e-09 Score=106.81 Aligned_cols=124 Identities=19% Similarity=0.199 Sum_probs=82.3
Q ss_pred EEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcCceEEEEECCCCCCCCch-h
Q 006979 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNYGGSTGYGR-E 541 (623)
Q Consensus 464 i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~G~~v~~~d~rGs~~~g~-~ 541 (623)
..+... +|..++...+.|.+ .|.||++||.+.. .. .|...+..| ++||.|+++|+||.|.+.. .
T Consensus 5 ~~~~~~-~g~~l~~~~~G~~~----------~~~vvllHG~~~~--~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~ 70 (286)
T 2yys_A 5 IGYVPV-GEAELYVEDVGPVE----------GPALFVLHGGPGG--NAYVLREGLQDY-LEGFRVVYFDQRGSGRSLELP 70 (286)
T ss_dssp EEEEEC-SSCEEEEEEESCTT----------SCEEEEECCTTTC--CSHHHHHHHGGG-CTTSEEEEECCTTSTTSCCCC
T ss_pred eeEEeE-CCEEEEEEeecCCC----------CCEEEEECCCCCc--chhHHHHHHHHh-cCCCEEEEECCCCCCCCCCCc
Confidence 333344 78888876665422 2679999999543 33 455667777 5689999999999765432 1
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.. ......++..+.+..+++. +..+++.++||||||.+++.++ .+|+ ++++|...+..++
T Consensus 71 -----~~-~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~ 131 (286)
T 2yys_A 71 -----QD-PRLFTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNF 131 (286)
T ss_dssp -----SC-GGGCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBH
T ss_pred -----cC-cccCcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCc
Confidence 00 0012334444333333332 1236899999999999999988 8999 9999999887654
No 176
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.04 E-value=7.2e-10 Score=108.43 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=75.5
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
..|+||++||.+.. ...|...+..|++ ||.|+.+|+||.|...... .........++..+.+..+++. ++.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDF----FDFRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGG----CCTTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCC----CCccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999998543 3456667778888 9999999999976653311 0011112344444444444433 234
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
+++.++|||+||++++.++ .+|++++++|...|...
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 126 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPR 126 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCC
Confidence 6999999999999999988 89999999999998653
No 177
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.04 E-value=2.4e-10 Score=111.64 Aligned_cols=112 Identities=11% Similarity=-0.075 Sum_probs=80.4
Q ss_pred CCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEE--CCCCCCCCchhHHHhhccCCc----cchHHHHHHHHHHHH
Q 006979 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV--NYGGSTGYGREFRERLLGRWG----IVDVNDCCSCATFLV 566 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~--d~rGs~~~g~~~~~~~~~~~g----~~~~~D~~~~~~~l~ 566 (623)
++.|+||++||+.. ....|...++.|++ +|.|+.+ |++|.|+++..- ....+.+. ....+|+.+.++++.
T Consensus 60 ~~~p~vv~~HG~~~--~~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 135 (251)
T 2r8b_A 60 AGAPLFVLLHGTGG--DENQFFDFGARLLP-QATILSPVGDVSEHGAARFFR-RTGEGVYDMVDLERATGKMADFIKANR 135 (251)
T ss_dssp TTSCEEEEECCTTC--CHHHHHHHHHHHST-TSEEEEECCSEEETTEEESSC-BCGGGCBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCC--CHhHHHHHHHhcCC-CceEEEecCCcCCCCCccccc-CCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45699999999853 33355566777776 4999999 777765432100 00001111 123677888888887
Q ss_pred hCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 567 GSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 567 ~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
++. +.+||+|+|+|+||++++.++ .+|++++++|.++|..+.
T Consensus 136 ~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~ 178 (251)
T 2r8b_A 136 EHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPF 178 (251)
T ss_dssp HHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCS
T ss_pred hcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCc
Confidence 663 678999999999999999988 889999999999998764
No 178
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.03 E-value=9.7e-10 Score=105.40 Aligned_cols=112 Identities=10% Similarity=0.037 Sum_probs=80.5
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHc--CceEEEEECCCCCC----------------CCchhHHHhhccCCccc
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGGST----------------GYGREFRERLLGRWGIV 553 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~--~G~~v~~~d~rGs~----------------~~g~~~~~~~~~~~g~~ 553 (623)
+++.|+||++||.+. ....|...+..|++ +||.|+.+|++|.+ |+|.. ......
T Consensus 21 ~~~~~~vv~lHG~~~--~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~------~~~~~~ 92 (226)
T 3cn9_A 21 PNADACIIWLHGLGA--DRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA------RAIDED 92 (226)
T ss_dssp TTCCEEEEEECCTTC--CGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST------TCBCHH
T ss_pred CCCCCEEEEEecCCC--ChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc------ccccch
Confidence 456799999999953 33456778888887 99999999888421 12211 001111
Q ss_pred ----hHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHhc--CCCceeEEEecccCCCHHH
Q 006979 554 ----DVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAALA--FRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 554 ----~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~--~~~~f~a~v~~~g~~d~~~ 612 (623)
..+|+.+.++++.+. .+|+++|+++|+|+||++++.++. +|+.++++|+.+|..++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~ 156 (226)
T 3cn9_A 93 QLNASADQVIALIDEQRAK-GIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD 156 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG
T ss_pred hHHHHHHHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch
Confidence 235555666666553 478899999999999999998875 7889999999999887643
No 179
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.02 E-value=8.2e-10 Score=109.59 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=72.6
Q ss_pred EEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCCc
Q 006979 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 497 liv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
.||++||.+. ....|...++.|+++||.|+++|+||.|.+... ...+.. ...+|+.+.++++ +.++
T Consensus 25 pvvllHG~~~--~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~-----~~~~~~~~~a~dl~~~l~~l------~~~~ 91 (277)
T 1brt_A 25 PVVLIHGFPL--SGHSWERQSAALLDAGYRVITYDRRGFGQSSQP-----TTGYDYDTFAADLNTVLETL------DLQD 91 (277)
T ss_dssp EEEEECCTTC--CGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC-----SSCCSHHHHHHHHHHHHHHH------TCCS
T ss_pred eEEEECCCCC--cHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCC-----CCCccHHHHHHHHHHHHHHh------CCCc
Confidence 3888999854 334677788899999999999999997655331 111111 1245565666555 2368
Q ss_pred eEEEEcChHHHHHHHHh-cCCC-ceeEEEecccC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRD-TFKAGASLYGV 607 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~-~f~a~v~~~g~ 607 (623)
+.++|||+||.+++.++ .+|+ +++++|...+.
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~ 125 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASL 125 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCc
Confidence 99999999999999988 8898 99999988764
No 180
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.02 E-value=1.4e-09 Score=105.99 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=75.9
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+. ....|...+..|+++||.|+.+|+||.|...... . .....++..+.+..++++-.. .++
T Consensus 5 ~~vv~lHG~~~--~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~---~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYH--GAWIWYKLKPLLESAGHRVTAVELAASGIDPRPI----Q---AVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTC--CGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCG----G---GCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCC--ccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCC----C---ccccHHHhHHHHHHHHHHhcc-cCc
Confidence 78999999954 3345778889999999999999999976654321 1 113344444444444433112 379
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+.++|||+||++++.++ .+|++++++|...|..
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 108 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFL 108 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCC
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCC
Confidence 99999999999999999 7899999999888753
No 181
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.02 E-value=2.1e-09 Score=105.94 Aligned_cols=116 Identities=18% Similarity=0.181 Sum_probs=78.5
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHh
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 545 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~ 545 (623)
+... +|..++...+- . -|.||++||.+. ....|...+..|+++||.|+++|+||.|.+....
T Consensus 3 ~~~~-~g~~l~y~~~G-----------~-g~~vvllHG~~~--~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~--- 64 (271)
T 3ia2_A 3 FVAK-DGTQIYFKDWG-----------S-GKPVLFSHGWLL--DADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW--- 64 (271)
T ss_dssp EECT-TSCEEEEEEES-----------S-SSEEEEECCTTC--CGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCS---
T ss_pred EEcC-CCCEEEEEccC-----------C-CCeEEEECCCCC--cHHHHHHHHHHHHhCCceEEEecCCCCccCCCCC---
Confidence 4455 78888754442 1 145888999854 3346667788899999999999999976554321
Q ss_pred hccCCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-c-CCCceeEEEecccC
Q 006979 546 LLGRWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-A-FRDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~-~~~~f~a~v~~~g~ 607 (623)
..+. ....+|+.+.++++ +.+++.++||||||++++.++ . .|++++++|...+.
T Consensus 65 --~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~ 121 (271)
T 3ia2_A 65 --TGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121 (271)
T ss_dssp --SCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred --CCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccC
Confidence 1111 11235555555554 246899999999999666555 4 48999999987754
No 182
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.02 E-value=2.5e-09 Score=116.72 Aligned_cols=126 Identities=15% Similarity=0.087 Sum_probs=89.1
Q ss_pred CCcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCC
Q 006979 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGY 538 (623)
Q Consensus 459 ~~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~ 538 (623)
...+...+... +|..++..... +.|.||++||++.. ...|...++.|+++||.|+.+|+||.|..
T Consensus 235 ~~~~~~~~~~~-dg~~l~~~~~g------------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~D~~G~G~S 299 (555)
T 3i28_A 235 SDMSHGYVTVK-PRVRLHFVELG------------SGPAVCLCHGFPES--WYSWRYQIPALAQAGYRVLAMDMKGYGES 299 (555)
T ss_dssp GGSEEEEEEEE-TTEEEEEEEEC------------SSSEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTS
T ss_pred cccceeEEEeC-CCcEEEEEEcC------------CCCEEEEEeCCCCc--hhHHHHHHHHHHhCCCEEEEecCCCCCCC
Confidence 34556666676 89888854442 23789999999543 34677788999999999999999997654
Q ss_pred chhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 539 GREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 539 g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.... ....+.. ...+|+.+.++++ +.+++.++|||+||++++.++ .+|++++++|...+..
T Consensus 300 ~~~~---~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 300 SAPP---EIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp CCCS---CGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCC---CcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 3321 0011111 1134555555554 346999999999999999999 8899999999887753
No 183
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.02 E-value=1.1e-09 Score=108.60 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=72.6
Q ss_pred EEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCCc
Q 006979 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 497 liv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
.||++||.+. ....|...+..|+++||.|+++|+||.|.+.... ..+.. ...+|+.+.++++ +.++
T Consensus 25 pvvllHG~~~--~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~dl~~~l~~l------~~~~ 91 (279)
T 1hkh_A 25 PVVLIHGYPL--DGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN-----TGYDYDTFAADLHTVLETL------DLRD 91 (279)
T ss_dssp EEEEECCTTC--CGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS-----SCCSHHHHHHHHHHHHHHH------TCCS
T ss_pred cEEEEcCCCc--hhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHhc------CCCc
Confidence 3889999854 3346777888999999999999999976653321 11111 1245666666655 2468
Q ss_pred eEEEEcChHHHHHHHHh-cCCC-ceeEEEecccC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRD-TFKAGASLYGV 607 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~-~f~a~v~~~g~ 607 (623)
+.++||||||.+++.++ .+|+ +++++|...+.
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~ 125 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASL 125 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccC
Confidence 99999999999999988 8898 99999988764
No 184
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.02 E-value=2.9e-09 Score=103.82 Aligned_cols=115 Identities=13% Similarity=0.013 Sum_probs=81.9
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHh
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 545 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~ 545 (623)
+... +|..++...+.+ .|.||++||.+... ..|...++.|+ +||.|+.+|+||.|.....
T Consensus 7 ~~~~-~g~~l~~~~~g~------------~~~vv~lHG~~~~~--~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~---- 66 (262)
T 3r0v_A 7 VPSS-DGTPIAFERSGS------------GPPVVLVGGALSTR--AGGAPLAERLA-PHFTVICYDRRGRGDSGDT---- 66 (262)
T ss_dssp EECT-TSCEEEEEEEEC------------SSEEEEECCTTCCG--GGGHHHHHHHT-TTSEEEEECCTTSTTCCCC----
T ss_pred EEcC-CCcEEEEEEcCC------------CCcEEEECCCCcCh--HHHHHHHHHHh-cCcEEEEEecCCCcCCCCC----
Confidence 3344 788887554421 26799999985433 45667778887 8999999999997655432
Q ss_pred hccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 546 LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 546 ~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
. ....+|..+.+..++++ .+ +++.++|||+||++++.++ .+| +++++|...|...
T Consensus 67 --~---~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~ 122 (262)
T 3r0v_A 67 --P---PYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYA 122 (262)
T ss_dssp --S---SCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCC
T ss_pred --C---CCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcc
Confidence 1 22345555444444443 23 6999999999999999998 888 9999999988754
No 185
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.02 E-value=2e-09 Score=107.37 Aligned_cols=120 Identities=22% Similarity=0.232 Sum_probs=79.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+ +.+.|.||++||+++... .+......++++||.|+++|+||.|.+...- ...+
T Consensus 13 ~g~~l~~~~~g~---------~~~~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~----~~~~ 77 (293)
T 1mtz_A 13 NGIYIYYKLCKA---------PEEKAKLMTMHGGPGMSH--DYLLSLRDMTKEGITVLFYDQFGCGRSEEPD----QSKF 77 (293)
T ss_dssp TTEEEEEEEECC---------SSCSEEEEEECCTTTCCS--GGGGGGGGGGGGTEEEEEECCTTSTTSCCCC----GGGC
T ss_pred CCEEEEEEEECC---------CCCCCeEEEEeCCCCcch--hHHHHHHHHHhcCcEEEEecCCCCccCCCCC----CCcc
Confidence 577777554432 112267889999754332 2222334456889999999999976543321 1111
Q ss_pred cc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 551 GI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 551 g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.. ...+|+.+.++++. +.+++.|+||||||.+++.++ .+|++++++|...|....
T Consensus 78 ~~~~~~~dl~~~~~~l~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~ 134 (293)
T 1mtz_A 78 TIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSV 134 (293)
T ss_dssp SHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBH
T ss_pred cHHHHHHHHHHHHHHhc-----CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccCh
Confidence 11 12455555566552 125899999999999999988 789999999999988764
No 186
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.01 E-value=2e-09 Score=107.59 Aligned_cols=115 Identities=14% Similarity=0.046 Sum_probs=81.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++.....+ .|.||++||.+.. ...|...+..|.++||.|+.+|+||.|..... .
T Consensus 17 ~g~~l~~~~~g~------------~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~-----~--- 74 (309)
T 3u1t_A 17 EGATIAYVDEGS------------GQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKP-----D--- 74 (309)
T ss_dssp TTEEEEEEEEEC------------SSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTTSCCC-----S---
T ss_pred CCeEEEEEEcCC------------CCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCCCCCCCCC-----C---
Confidence 577777544321 3689999998543 34566777887889999999999997654331 1
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.....+|..+.+..++++ .+.+++.|+|||+||++++.++ .+|++++++|...|...
T Consensus 75 ~~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 132 (309)
T 3u1t_A 75 IEYRLQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVP 132 (309)
T ss_dssp SCCCHHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCT
T ss_pred cccCHHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCC
Confidence 123344544444444433 1246999999999999999988 89999999999987643
No 187
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.01 E-value=2.7e-09 Score=110.18 Aligned_cols=120 Identities=15% Similarity=0.116 Sum_probs=83.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++.....|.+ +..|.||++||.+.. ...|...+..|+++||.|+.+|+||.|...... ..
T Consensus 11 ~g~~l~y~~~G~~~--------~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~------~~ 74 (356)
T 2e3j_A 11 RGTRIHAVADSPPD--------QQGPLVVLLHGFPES--WYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR------VQ 74 (356)
T ss_dssp TTEEEEEEEECCTT--------CCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCC------SG
T ss_pred CCeEEEEEEecCCC--------CCCCEEEEECCCCCc--HHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC------cc
Confidence 68888877776642 234789999998543 345666788899999999999999966543210 00
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.....++..+.+..+++. ++.+++.++|||+||++++.++ .+|++++++|...+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 75 KAYRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred cccCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 112233433333333332 2357999999999999999988 8899999999987654
No 188
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.4e-07 Score=96.48 Aligned_cols=232 Identities=12% Similarity=0.024 Sum_probs=134.7
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ ..+++...++.|.++|+.++ .....+... ........|+|+|++|+....+ ..|.+
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------g~i~i 100 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNG-ERLGTLDGH----TGTIWSIDVDCFTKYCVTGSAD---------YSIKL 100 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTC-CEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------TEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-hhhhhhhhc----CCcEEEEEEcCCCCEEEEEeCC---------CeEEE
Confidence 455666665 45666667888999999876 233445432 3456778899999988876553 56899
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeee--------EEEcCCCC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR--------VCVAGFDP 297 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~--------~~~~~~~~ 297 (623)
+|+.+++ ...............|+|||++|+....+... ....|.++++......... ..+.....
T Consensus 101 wd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~---~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 101 WDVSNGQ---CVATWKSPVPVKRVEFSPCGNYFLAILDNVMK---NPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EETTTCC---EEEEEECSSCEEEEEECTTSSEEEEEECCBTT---BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred EECCCCc---EEEEeecCCCeEEEEEccCCCEEEEecCCccC---CCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 9998876 33333344445668899999999877643111 1246888887765321111 11111110
Q ss_pred CccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCC-CeEE-EEeecccccccccccccCcceeEEeecCCCCEEEEEE
Q 006979 298 TIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (623)
Q Consensus 298 ~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~-~~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~ 375 (623)
. ..+....|+|||++++.... +| .|..+|+.+ ++.. .+......+....|. ++++.|+. .
T Consensus 175 ~--~~~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~------------~~~~~l~~-~ 236 (369)
T 3zwl_B 175 L--DAATVAGWSTKGKYIIAGHK-DG--KISKYDVSNNYEYVDSIDLHEKSISDMQFS------------PDLTYFIT-S 236 (369)
T ss_dssp C--CCEEEEEECGGGCEEEEEET-TS--EEEEEETTTTTEEEEEEECCSSCEEEEEEC------------TTSSEEEE-E
T ss_pred c--cceeEEEEcCCCCEEEEEcC-CC--EEEEEECCCCcEeEEEEecCCCceeEEEEC------------CCCCEEEE-e
Confidence 0 15667889999985555544 34 466677776 3433 333232233333333 26665544 4
Q ss_pred EECCeEEEEEEeCCCCceeecccCCcceEee--eecCCEEEEEEe
Q 006979 376 RQNGRSYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGA 418 (623)
Q Consensus 376 ~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~ 418 (623)
..++ .|.++|+.+++..........+..+ ++++..+++...
T Consensus 237 ~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 237 SRDT--NSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp ETTS--EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC
T ss_pred cCCc--eEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeec
Confidence 4455 4666787776654332233334433 666666665543
No 189
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.01 E-value=3.2e-08 Score=102.20 Aligned_cols=294 Identities=11% Similarity=0.010 Sum_probs=150.3
Q ss_pred CCccCceEEcCCCcEEEEeecCCC---CCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCC
Q 006979 88 SKRLGGTAVDGHGRLIWLESRPTE---AGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (623)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~e---~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~ 164 (623)
...+..++|+|++.+.-....... ++. ++.++..++.....+.. ...-++.++.+.+++++.-+++...+
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~--v~~~~~~~~~~~~~~~~-----~~~~~~~~V~~~~~s~d~~~l~~s~d 114 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGS--IWVFKDPEGAPNESLCT-----AGVQTEAGVTDVAWVSEKGILVASDS 114 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEE--EEEESSCC---CGGGCS-----EEEECSSCEEEEEEETTTEEEEEETT
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCe--EEEEECCCCCcceeEec-----ccCCCCCCEEEEEEcCCCCEEEEECC
Confidence 345778999994444434332110 122 44444332211122211 11123445567777777334445567
Q ss_pred CcEEEEeCCCCCCCceecCC-CCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCC
Q 006979 165 QRLYKHSIDSKDSSPLPITP-DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS 243 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~~Lt~-~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~ 243 (623)
+.|.++|+.++ ....... ....-...+....|+|||++|+....+ ..|.++|+.+++. ...+....
T Consensus 115 g~v~lWd~~~~--~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---------g~v~iwd~~~~~~--~~~~~~h~ 181 (357)
T 4g56_B 115 GAVELWEILEK--ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---------FSVKVWDLSQKAV--LKSYNAHS 181 (357)
T ss_dssp SCEEEC----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTTEE--EEEECCCS
T ss_pred CEEEEeecccc--ceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---------CeEEEEECCCCcE--EEEEcCCC
Confidence 88999998765 2211111 000002345678899999988776554 4588889988762 23343334
Q ss_pred CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCC
Q 006979 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKN 322 (623)
Q Consensus 244 ~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~ 322 (623)
..+...+|+||++.++.....+ ..|.+.|+..+.. ...+...... ..+....|+|++. ++..... +
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~---~~~~~~~~~~--~~v~~v~~sp~~~~~la~g~~-d 248 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGED-------GRILLWDTRKPKP---ATRIDFCASD--TIPTSVTWHPEKDDTFACGDE-T 248 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETT-------SCEEECCTTSSSC---BCBCCCTTCC--SCEEEEEECTTSTTEEEEEES-S
T ss_pred CCEEEEEEccCCCceeeeeccC-------CceEEEECCCCce---eeeeeecccc--ccccchhhhhcccceEEEeec-c
Confidence 4556678999997554443232 2377778876632 1111111101 3456789999876 6655544 3
Q ss_pred CeeeEEEEecCCCeE-EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCc
Q 006979 323 GFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFT 401 (623)
Q Consensus 323 g~~~L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~ 401 (623)
+ .|..+|+.+++. +.+......+....|+ |+++.++++...++.-+| +|.++++..+......
T Consensus 249 ~--~i~~wd~~~~~~~~~~~~~~~~v~~l~~s------------p~~~~~lasgs~D~~i~i--wd~~~~~~~~~~~H~~ 312 (357)
T 4g56_B 249 G--NVSLVNIKNPDSAQTSAVHSQNITGLAYS------------YHSSPFLASISEDCTVAV--LDADFSEVFRDLSHRD 312 (357)
T ss_dssp S--CEEEEESSCGGGCEEECCCSSCEEEEEEC------------SSSSCCEEEEETTSCEEE--ECTTSCEEEEECCCSS
T ss_pred c--ceeEEECCCCcEeEEEeccceeEEEEEEc------------CCCCCEEEEEeCCCEEEE--EECCCCcEeEECCCCC
Confidence 4 355667766653 3333222222222332 277667776666776554 5887777655433334
Q ss_pred ceEee--eecCCEEEEEEecCCCCCeEEEEEcCC
Q 006979 402 DIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 402 ~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~ 433 (623)
.+..+ ++.++.++++++.. ..|...++..
T Consensus 313 ~V~~vafsP~d~~~l~s~s~D---g~v~iW~~~~ 343 (357)
T 4g56_B 313 FVTGVAWSPLDHSKFTTVGWD---HKVLHHHLPS 343 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETT---SCEEEEECC-
T ss_pred CEEEEEEeCCCCCEEEEEcCC---CeEEEEECCC
Confidence 46655 55344444454432 3456666544
No 190
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.01 E-value=2.5e-09 Score=104.99 Aligned_cols=103 Identities=14% Similarity=0.021 Sum_probs=76.2
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+.. ...|...+..|++ ||.|+.+|+||.|.....- .......+|+.+.+..++++ .+.++
T Consensus 24 ~~vv~~HG~~~~--~~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~--l~~~~ 92 (278)
T 3oos_A 24 PPLCVTHLYSEY--NDNGNTFANPFTD-HYSVYLVNLKGCGNSDSAK------NDSEYSMTETIKDLEAIREA--LYINK 92 (278)
T ss_dssp SEEEECCSSEEC--CTTCCTTTGGGGG-TSEEEEECCTTSTTSCCCS------SGGGGSHHHHHHHHHHHHHH--TTCSC
T ss_pred CeEEEEcCCCcc--hHHHHHHHHHhhc-CceEEEEcCCCCCCCCCCC------CcccCcHHHHHHHHHHHHHH--hCCCe
Confidence 679999998543 3346667778877 9999999999976543321 01122355555555555444 23469
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
+.++|||+||.+++.++ .+|++++++|...|...
T Consensus 93 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 127 (278)
T 3oos_A 93 WGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127 (278)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred EEEEeecccHHHHHHHHHhCchhhCeEEEecCccc
Confidence 99999999999999998 88999999999999877
No 191
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.01 E-value=3.2e-10 Score=123.50 Aligned_cols=126 Identities=20% Similarity=0.288 Sum_probs=85.6
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCH--H-hHHHH-cCceEEEEECCCCCC-CC--chhHHHhh
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNL--S-IQYWT-SRGWAFVDVNYGGST-GY--GREFRERL 546 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~--~-~~~~a-~~G~~v~~~d~rGs~-~~--g~~~~~~~ 546 (623)
+...+|.|.+.. .++++|+||++|||+...... .+.. . .+.++ ..|++|+.+|||.+. |+ ..+..+
T Consensus 106 l~l~v~~P~~~~----~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~-- 179 (544)
T 1thg_A 106 LYLNVFRPAGTK----PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA-- 179 (544)
T ss_dssp CEEEEEEETTCC----TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH--
T ss_pred eEEEEEeCCCCC----CCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc--
Confidence 556677786521 156789999999997544332 2221 1 11122 358999999999643 11 111111
Q ss_pred ccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cC--------CCceeEEEecccC
Q 006979 547 LGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AF--------RDTFKAGASLYGV 607 (623)
Q Consensus 547 ~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~--------~~~f~a~v~~~g~ 607 (623)
...+...+.|+.+|++|+.++- ..|++||.|+|+|+||++++.++ .. ..+|+++|+.+|.
T Consensus 180 -~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 180 -EGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp -HTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred -cCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 1234445899999999998752 37999999999999999998777 42 4589999999984
No 192
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.00 E-value=2.3e-09 Score=107.03 Aligned_cols=128 Identities=9% Similarity=-0.041 Sum_probs=87.0
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCc
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYG 539 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g 539 (623)
..+...+.. +|..++..... ..|.||++||.+.. ...|...+..|++ ||.|+.+|+||.|...
T Consensus 12 ~~~~~~~~~--~g~~l~~~~~g------------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~ 74 (306)
T 3r40_A 12 GFGSEWINT--SSGRIFARVGG------------DGPPLLLLHGFPQT--HVMWHRVAPKLAE-RFKVIVADLPGYGWSD 74 (306)
T ss_dssp TCEEEEECC--TTCCEEEEEEE------------CSSEEEEECCTTCC--GGGGGGTHHHHHT-TSEEEEECCTTSTTSC
T ss_pred CCceEEEEe--CCEEEEEEEcC------------CCCeEEEECCCCCC--HHHHHHHHHHhcc-CCeEEEeCCCCCCCCC
Confidence 344444444 67778755432 22689999999543 3456777888888 9999999999976543
Q ss_pred hhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 540 REFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 540 ~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.... .........++..+.+..++++ .+.+++.++|||+||.+++.++ .+|++++++|...+...
T Consensus 75 ~~~~---~~~~~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 140 (306)
T 3r40_A 75 MPES---DEQHTPYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPT 140 (306)
T ss_dssp CCCC---CTTCGGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCH
T ss_pred CCCC---CcccCCCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCC
Confidence 3210 0000123345555555544443 2346899999999999999998 89999999999998644
No 193
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.00 E-value=2.8e-09 Score=107.58 Aligned_cols=114 Identities=12% Similarity=0.100 Sum_probs=81.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+ .|.||++||.+.. ...|...++.|++ ||.|+.+|+||.|.... ..
T Consensus 56 ~~~~~~~~~~g~------------~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~--------~~ 112 (314)
T 3kxp_A 56 GRITLNVREKGS------------GPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRGHGLSDK--------PE 112 (314)
T ss_dssp SSCEEEEEEECC------------SSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTTSTTSCC--------CS
T ss_pred CCEEEEEEecCC------------CCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCCcCCCCC--------CC
Confidence 577777554422 4789999998543 3456667777777 69999999999766531 11
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.....+|..+.+..++++ ++.++++++|+|+||++++.++ .+|++++++|...|...
T Consensus 113 ~~~~~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (314)
T 3kxp_A 113 TGYEANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPY 170 (314)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCC
Confidence 223455555555554443 1237999999999999999999 88999999999987654
No 194
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.00 E-value=1.9e-10 Score=114.75 Aligned_cols=115 Identities=18% Similarity=0.115 Sum_probs=79.0
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcC--ceEEEEECCC---CCCCCchhHHHh--hccCCc-------cchHHH
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYG---GSTGYGREFRER--LLGRWG-------IVDVND 557 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~--G~~v~~~d~r---Gs~~~g~~~~~~--~~~~~g-------~~~~~D 557 (623)
+++.|+||++||.. .....+...++.|+.+ ++.++.|+-+ ...+.|..|... ...... ....++
T Consensus 63 ~~~~plVI~LHG~G--~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~ 140 (285)
T 4fhz_A 63 GEATSLVVFLHGYG--ADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARD 140 (285)
T ss_dssp TCCSEEEEEECCTT--BCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCC--CCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHH
Confidence 77889999999963 2333444456667654 8999998743 122334433210 001000 112345
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 558 CCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 558 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+.+.++.+.++..+|++||+|+|+|+||++++.++ ++|+.|+++|+++|..
T Consensus 141 l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l 192 (285)
T 4fhz_A 141 LDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRL 192 (285)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCC
T ss_pred HHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCc
Confidence 66777777777679999999999999999999998 8999999999999864
No 195
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.00 E-value=1.3e-09 Score=107.54 Aligned_cols=103 Identities=16% Similarity=0.163 Sum_probs=72.7
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHh-CCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVG-SGKAD 572 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d 572 (623)
..|.||++||.+. ....|...+..|+++||.|+++|+||.|.+.... .. ...+++..+.+..+++ .+.
T Consensus 9 ~g~~vvllHG~~~--~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~----~~---~~~~~~~a~dl~~~l~~l~~-- 77 (264)
T 2wfl_A 9 QQKHFVLVHGGCL--GAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRL----DE---IHTFRDYSEPLMEVMASIPP-- 77 (264)
T ss_dssp CCCEEEEECCTTC--CGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG----GG---CCSHHHHHHHHHHHHHHSCT--
T ss_pred CCCeEEEECCCcc--ccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCc----cc---ccCHHHHHHHHHHHHHHhCC--
Confidence 4477999999853 3345777888999999999999999976553311 01 1223444333333332 221
Q ss_pred CCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 573 EKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
.+++.|+||||||.+++.++ .+|++++++|...+.
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 36899999999999999988 899999999987753
No 196
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.00 E-value=2.6e-09 Score=106.23 Aligned_cols=123 Identities=13% Similarity=-0.008 Sum_probs=84.6
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCch
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGR 540 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~ 540 (623)
.+...+... +|..++...+.+.+ +.|.||++||.+. ....|...+..|++ ||.|+++|+||.|.+..
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~g~~~---------~~~~vvllHG~~~--~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~ 71 (285)
T 3bwx_A 5 YEDRYWTSS-DGLRLHFRAYEGDI---------SRPPVLCLPGLTR--NARDFEDLATRLAG-DWRVLCPEMRGRGDSDY 71 (285)
T ss_dssp SEEEEEECT-TSCEEEEEEECBCT---------TSCCEEEECCTTC--CGGGGHHHHHHHBB-TBCEEEECCTTBTTSCC
T ss_pred cccCeeecC-CCceEEEEEcCCCC---------CCCcEEEECCCCc--chhhHHHHHHHhhc-CCEEEeecCCCCCCCCC
Confidence 345566666 88888877665432 1356888999853 33456677788876 99999999999765432
Q ss_pred hHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecc
Q 006979 541 EFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLY 605 (623)
Q Consensus 541 ~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~ 605 (623)
.- ....+.. ...+|+.+.++.+. .+++.++||||||.+++.++ .+|++++++|...
T Consensus 72 ~~---~~~~~~~~~~a~dl~~~l~~l~------~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 72 AK---DPMTYQPMQYLQDLEALLAQEG------IERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp CS---SGGGCSHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred CC---CccccCHHHHHHHHHHHHHhcC------CCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 10 0011111 12456666666552 36899999999999999988 8999999998853
No 197
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.00 E-value=4.4e-10 Score=122.16 Aligned_cols=127 Identities=19% Similarity=0.231 Sum_probs=86.8
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc-CCH--H-hHHH-HcCceEEEEECCCCCC-CC--chhHHHh
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNL--S-IQYW-TSRGWAFVDVNYGGST-GY--GREFRER 545 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~-~~~--~-~~~~-a~~G~~v~~~d~rGs~-~~--g~~~~~~ 545 (623)
.+...+|.|++.. .++++|+||++|||+....... +.. . ...+ .+.|++|+.+|||.+. |+ +.+...
T Consensus 97 cl~l~v~~P~~~~----~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~- 171 (534)
T 1llf_A 97 CLTINVVRPPGTK----AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA- 171 (534)
T ss_dssp CCEEEEEECTTCC----TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH-
T ss_pred CeEEEEEECCCCC----CCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc-
Confidence 3666788887521 1567899999999975433322 221 1 1112 2368999999999632 11 111111
Q ss_pred hccCCccchHHHHHHHHHHHHhC---CCCCCCceEEEEcChHHHHHHHHh-cC--------CCceeEEEecccC
Q 006979 546 LLGRWGIVDVNDCCSCATFLVGS---GKADEKRLCITGGSAGGYTTLAAL-AF--------RDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g~~~~~D~~~~~~~l~~~---~~~d~~rv~i~G~S~GG~~~~~~~-~~--------~~~f~a~v~~~g~ 607 (623)
...+...++|+.+|++|+.++ --.|++||.|+|+|+||++++.++ .. ..+|+++|+.+|.
T Consensus 172 --~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 172 --EGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp --HTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred --cCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 123444589999999999875 237999999999999999888777 43 5689999999984
No 198
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=98.99 E-value=4e-09 Score=104.09 Aligned_cols=118 Identities=14% Similarity=0.050 Sum_probs=80.5
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHh
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRER 545 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~ 545 (623)
+... +|..++...+-+. ..|.||++||.+. ....|......|++ +|.|+++|.||.|.+...
T Consensus 9 ~~~~-~g~~l~y~~~G~~----------~~p~lvl~hG~~~--~~~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~~---- 70 (266)
T 3om8_A 9 LATS-DGASLAYRLDGAA----------EKPLLALSNSIGT--TLHMWDAQLPALTR-HFRVLRYDARGHGASSVP---- 70 (266)
T ss_dssp EECT-TSCEEEEEEESCT----------TSCEEEEECCTTC--CGGGGGGGHHHHHT-TCEEEEECCTTSTTSCCC----
T ss_pred Eecc-CCcEEEEEecCCC----------CCCEEEEeCCCcc--CHHHHHHHHHHhhc-CcEEEEEcCCCCCCCCCC----
Confidence 3444 7888886655432 2478899999843 33456677778876 799999999997655321
Q ss_pred hccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 546 LLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
... ...++..+.+..+++. ...+++.++||||||.+++.++ .+|+++++.|...+.
T Consensus 71 -~~~---~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~ 127 (266)
T 3om8_A 71 -PGP---YTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTS 127 (266)
T ss_dssp -CSC---CCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -CCC---CCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCc
Confidence 111 2333333333333322 1236899999999999999988 899999999987653
No 199
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.99 E-value=5.9e-10 Score=121.23 Aligned_cols=127 Identities=16% Similarity=0.113 Sum_probs=87.8
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcC-CHHhHHHHc-CceEEEEECCCCC-CCCchhHHHhhccCCc
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYGGS-TGYGREFRERLLGRWG 551 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~-~~~~~~~a~-~G~~v~~~d~rGs-~~~g~~~~~~~~~~~g 551 (623)
+...+|.|... .++.|+||++|||......... ......|++ +|++|+.+|||-+ -||.... ......+
T Consensus 93 l~lnv~~P~~~------~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~~~ 164 (529)
T 1p0i_A 93 LYLNVWIPAPK------PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--GNPEAPG 164 (529)
T ss_dssp CEEEEEEESSC------CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCTTSCS
T ss_pred CeEEEeeCCCC------CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--CCCCCcC
Confidence 55566778651 3568999999999643332221 123466776 7999999999932 1111100 0011223
Q ss_pred cchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHhcC---CCceeEEEecccCCC
Q 006979 552 IVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVSI 609 (623)
Q Consensus 552 ~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~---~~~f~a~v~~~g~~d 609 (623)
...+.|+.+|++|+.++- -.|++||.|+|+|+||++++.++.. ..+|+++|+.+|..+
T Consensus 165 n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 165 NMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 345889999999998752 3799999999999999999988833 468999999999753
No 200
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=98.99 E-value=3.5e-09 Score=108.14 Aligned_cols=124 Identities=16% Similarity=0.123 Sum_probs=82.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCC-CEEEEecCCCCCcccCcCCHHhHHHHc-CceEEEEECCCCCCCCchhHHHhhcc
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKP-PLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLG 548 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~-Pliv~~hGg~~~~~~~~~~~~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~~~ 548 (623)
+|.+++...+-+.+ +.++ +.||++||++.... .|......|++ .||.|+++|+||.|.+...-.. ...
T Consensus 36 ~g~~l~y~~~G~~~-------~~~~g~plvllHG~~~~~~--~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~-~~~ 105 (330)
T 3nwo_A 36 GDHETWVQVTTPEN-------AQPHALPLIVLHGGPGMAH--NYVANIAALADETGRTVIHYDQVGCGNSTHLPDA-PAD 105 (330)
T ss_dssp TTEEEEEEEECCSS-------CCTTCCCEEEECCTTTCCS--GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTS-CGG
T ss_pred cCcEEEEEEecCcc-------CCCCCCcEEEECCCCCCch--hHHHHHHHhccccCcEEEEECCCCCCCCCCCCCC-ccc
Confidence 68888887776643 2211 24777899865433 45455666775 6999999999997765431000 001
Q ss_pred CCc-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 549 RWG-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 549 ~~g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.+. ....+|+.+.++.+. .+++.++||||||++++.++ .+|++++++|...+...+
T Consensus 106 ~~~~~~~a~dl~~ll~~lg------~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~ 163 (330)
T 3nwo_A 106 FWTPQLFVDEFHAVCTALG------IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASM 163 (330)
T ss_dssp GCCHHHHHHHHHHHHHHHT------CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBH
T ss_pred cccHHHHHHHHHHHHHHcC------CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcch
Confidence 111 112455666665552 36899999999999999998 899999999988776543
No 201
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.99 E-value=4.6e-10 Score=123.34 Aligned_cols=117 Identities=20% Similarity=0.207 Sum_probs=81.3
Q ss_pred CCCCCEEEEecCCCCCcccCcC-CHHhHHHHc-CceEEEEECCC-CCCCCch---hHHH-hhccCCccchHHHHHHHHHH
Q 006979 492 EEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYG-GSTGYGR---EFRE-RLLGRWGIVDVNDCCSCATF 564 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~-~~~~~~~a~-~G~~v~~~d~r-Gs~~~g~---~~~~-~~~~~~g~~~~~D~~~~~~~ 564 (623)
++++|+||++|||+........ ......|++ .|++|+.+||| |.-||.. .+.. ......+..-+.|+.+|++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4678999999999654333221 123456665 78999999999 3222211 1100 01112233448999999999
Q ss_pred HHhCC---CCCCCceEEEEcChHHHHHHHHhcC---CCceeEEEecccCC
Q 006979 565 LVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVS 608 (623)
Q Consensus 565 l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~---~~~f~a~v~~~g~~ 608 (623)
+.++- -.||+||.|+|+|+||++++.++.. ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 99863 2699999999999999999887733 46899999999864
No 202
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=98.99 E-value=1.6e-09 Score=106.61 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=76.0
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+.. ...|...++.|++ ||.|+.+|+||.|....... ........++..+.+..+++. .+.++
T Consensus 29 ~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 99 (282)
T 3qvm_A 29 KTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESF----STKRYSSLEGYAKDVEEILVA--LDLVN 99 (282)
T ss_dssp CEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGC----CTTGGGSHHHHHHHHHHHHHH--TTCCS
T ss_pred CeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCCCCCCCCCCC----CccccccHHHHHHHHHHHHHH--cCCCc
Confidence 899999998543 3466677888887 99999999999776544210 001112345555555544443 23479
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
+.++|||+||++++.++ .+|+.++++|...|...
T Consensus 100 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 134 (282)
T 3qvm_A 100 VSIIGHSVSSIIAGIASTHVGDRISDITMICPSPC 134 (282)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred eEEEEecccHHHHHHHHHhCchhhheEEEecCcch
Confidence 99999999999999998 78999999999998753
No 203
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=98.98 E-value=2.8e-09 Score=104.26 Aligned_cols=115 Identities=8% Similarity=0.054 Sum_probs=80.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+. ..|.||++||.+.. ...|...+..|++ +|.|+++|+||.|..... .
T Consensus 7 ~g~~l~~~~~g~~----------~~~~vv~lHG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~-----~--- 65 (264)
T 3ibt_A 7 NGTLMTYSESGDP----------HAPTLFLLSGWCQD--HRLFKNLAPLLAR-DFHVICPDWRGHDAKQTD-----S--- 65 (264)
T ss_dssp TTEECCEEEESCS----------SSCEEEEECCTTCC--GGGGTTHHHHHTT-TSEEEEECCTTCSTTCCC-----C---
T ss_pred CCeEEEEEEeCCC----------CCCeEEEEcCCCCc--HhHHHHHHHHHHh-cCcEEEEccccCCCCCCC-----c---
Confidence 5777775554332 23789999999543 3457777788855 599999999997654432 1
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-CCceeEEEecccCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGVS 608 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~~ 608 (623)
.....++..+.+..++++ .+.+++.++|||+||++++.++ .+ |++++++|...+..
T Consensus 66 ~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 66 GDFDSQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp SCCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred cccCHHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 122344444444444333 1346899999999999999999 89 99999999998754
No 204
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=98.98 E-value=4.9e-10 Score=108.36 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=76.7
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcC-----ceEEEEECCCCCC------CCchhHHHh-h---ccCCccchHH
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSR-----GWAFVDVNYGGST------GYGREFRER-L---LGRWGIVDVN 556 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~-----G~~v~~~d~rGs~------~~g~~~~~~-~---~~~~g~~~~~ 556 (623)
+++.|+||++||... ....+......++++ ||.|+.+|.++.. +.+..|.+. . ........++
T Consensus 20 ~~~~p~vv~lHG~g~--~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 20 GRHSASLIFLHGSGD--SGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp SCCCEEEEEECCTTC--CHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCCcEEEEEecCCC--chhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 456799999999843 333455566777664 7999999986421 111111110 0 0000112233
Q ss_pred HHH----HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHHH
Q 006979 557 DCC----SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPVI 612 (623)
Q Consensus 557 D~~----~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~~ 612 (623)
++. ..++.+.+. .+|.+||+|+|+|+||++++.++ .+|+.|+++|+.+|..+...
T Consensus 98 ~~~~~l~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~ 157 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKS-GIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKAS 157 (239)
T ss_dssp HHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTC
T ss_pred HHHHHHHHHHHHHHHh-CCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchh
Confidence 444 444444333 47889999999999999999988 88999999999999887643
No 205
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.98 E-value=4.5e-08 Score=99.71 Aligned_cols=123 Identities=10% Similarity=0.013 Sum_probs=69.2
Q ss_pred ceEEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCC---CeeecceeeCCCCCEEEEEEeccCCCCC---Cc
Q 006979 148 GAFRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEP---LVSYADGIFDPRFNRYVTVREDRRQDAL---NS 219 (623)
Q Consensus 148 ~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~---~~~~~d~~~sPdG~~l~~v~~~~~~~~~---~~ 219 (623)
...+++++ .+++....++.|+++|+.++ .....+.... .+ ......+.|||||++|++...+...... ..
T Consensus 46 ~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~-~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 46 GTAMMAPDNRTAYVLNNHYGDIYGIDLDTC-KNTFHANLSS-VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp CEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEESCC-STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred ceeEECCCCCEEEEEeCCCCcEEEEeCCCC-cEEEEEEccc-ccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 34556655 56777767788999999876 2222333210 00 1113567899999998887654100000 01
Q ss_pred eeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC
Q 006979 220 TTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN 283 (623)
Q Consensus 220 ~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~ 283 (623)
...|+++|+++++..................|||||+ |++. .. .|+++|+.++
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~--~~--------~i~~~d~~~~ 176 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA--GP--------DIYKMDVKTG 176 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE--SS--------SEEEECTTTC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc--cC--------cEEEEeCCCC
Confidence 2679999998865211111222222344566999999 6543 11 1777776654
No 206
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=98.98 E-value=1.8e-09 Score=103.91 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=71.9
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHH----hCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLV----GSG 569 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~----~~~ 569 (623)
+.|.||++||.+... ..|. ....++ +||.|+.+|+||.|.... ......++..+.+..++ .+.
T Consensus 15 ~~~~vv~~hG~~~~~--~~~~-~~~~l~-~g~~v~~~d~~g~g~s~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNL--KIFG-ELEKYL-EDYNCILLDLKGHGESKG---------QCPSTVYGYIDNVANFITNSEVTK 81 (245)
T ss_dssp CSCEEEEECCTTCCG--GGGT-TGGGGC-TTSEEEEECCTTSTTCCS---------CCCSSHHHHHHHHHHHHHHCTTTT
T ss_pred CCCEEEEEeCCcccH--HHHH-HHHHHH-hCCEEEEecCCCCCCCCC---------CCCcCHHHHHHHHHHHHHhhhhHh
Confidence 458999999985443 3444 555555 899999999999765431 11223444444444444 222
Q ss_pred CCCCCceEEEEcChHHHHHHHHh-c-CCCceeEEEecccCCCH
Q 006979 570 KADEKRLCITGGSAGGYTTLAAL-A-FRDTFKAGASLYGVSIP 610 (623)
Q Consensus 570 ~~d~~rv~i~G~S~GG~~~~~~~-~-~~~~f~a~v~~~g~~d~ 610 (623)
..+ ++.++|||+||++++.++ . +|+ ++++|..+|..++
T Consensus 82 ~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~ 121 (245)
T 3e0x_A 82 HQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARF 121 (245)
T ss_dssp TCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBC
T ss_pred hcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCcc
Confidence 233 999999999999999999 7 899 9999999998765
No 207
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=98.98 E-value=2.1e-09 Score=110.91 Aligned_cols=131 Identities=17% Similarity=0.191 Sum_probs=84.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-----------cCCHHh---HHHHcCceEEEEECCCC--
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----------ILNLSI---QYWTSRGWAFVDVNYGG-- 534 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-----------~~~~~~---~~~a~~G~~v~~~d~rG-- 534 (623)
+|..++...+.+.+ ....|.||++||.+...... .|...+ +.+.++||.|+.+|+||
T Consensus 29 ~g~~l~y~~~g~~~-------~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~ 101 (366)
T 2pl5_A 29 SPVVIAYETYGTLS-------SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGC 101 (366)
T ss_dssp SSEEEEEEEEECCC-------TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCS
T ss_pred cCceeeEEeccCcC-------CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcc
Confidence 45566655554432 22357899999996554411 344444 24567899999999999
Q ss_pred CCCCchhHHHhh-----ccCCccchHHHHHHHHHHHHhCCCCCCCce-EEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 535 STGYGREFRERL-----LGRWGIVDVNDCCSCATFLVGSGKADEKRL-CITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 535 s~~~g~~~~~~~-----~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv-~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
.|..+..-.... ...+.....+|+.+.+..++++ ++.+++ .++|||+||.+++.++ .+|++++++|...|.
T Consensus 102 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 179 (366)
T 2pl5_A 102 KGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMAST 179 (366)
T ss_dssp SSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCC
T ss_pred cCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccC
Confidence 454432110000 0001123566666666665554 234788 8999999999999998 899999999999987
Q ss_pred CCH
Q 006979 608 SIP 610 (623)
Q Consensus 608 ~d~ 610 (623)
...
T Consensus 180 ~~~ 182 (366)
T 2pl5_A 180 AEH 182 (366)
T ss_dssp SBC
T ss_pred ccC
Confidence 653
No 208
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.97 E-value=1.2e-07 Score=98.19 Aligned_cols=218 Identities=12% Similarity=-0.003 Sum_probs=116.2
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC-CCCcccceeccc--CCCcccceeeCCCCCEEE-EEEecCCCC
Q 006979 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN-GQNIQEPKVLVS--GSDFYAFPRMDPRGERMA-WIEWHHPNM 268 (623)
Q Consensus 193 ~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~-~g~~~~~~~l~~--~~~~~~~p~wSPDG~~la-~~~~~~~~~ 268 (623)
....++||||++|+.+.++ .+.+++++ +++ ...+.. .........|||||++|+ ++. +....
T Consensus 42 ~~~~a~spdg~~l~~~~~~----------~v~~~~~~~~g~---~~~~~~~~~~g~~~~~~~spdg~~l~~~~~-~~~~~ 107 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK----------KWSSFAVKSPTE---IVHEASHPIGGHPRANDADTNTRAIFLLAA-KQPPY 107 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT----------EEEEEEEEETTE---EEEEEEEECCSSGGGGCTTSCCEEEEEEEC-SSTTC
T ss_pred CcEEEECCCCCEEEEEccc----------eEEEEEECCCCC---EEEeeEeecCCCCccEEECCCCCEEEEEEe-cCCcc
Confidence 3457799999988766542 36666665 565 333321 112244578999999743 443 20000
Q ss_pred -CC------CceEEEEEEecCCCceeee-EEEc-CCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecC-CCeEE
Q 006979 269 -PW------DKAELWVGYISENGDVYKR-VCVA-GFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEVL 338 (623)
Q Consensus 269 -p~------~~~~L~v~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~-~~~~~ 338 (623)
.+ ....+.+++++..+.+... ..+. ... ..+..+.|+|||+.+++++. +...|+.++.+ +++.+
T Consensus 108 ~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~spdG~~l~~~~~--~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 108 AVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN----TGIHGMVFDPTETYLYSADL--TANKLWTHRKLASGEVE 181 (365)
T ss_dssp CEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTT----CCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCEE
T ss_pred eeccceeecCCceEEEEccCCCCcCcceEeeEEeCCC----CcceEEEECCCCCEEEEEcC--CCCEEEEEEECCCCCEE
Confidence 00 1234777777654332211 1111 111 34567899999996666665 33467777776 67655
Q ss_pred EEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee----ec---ccCC---c-------
Q 006979 339 AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS----LL---DIPF---T------- 401 (623)
Q Consensus 339 ~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~----~l---t~~~---~------- 401 (623)
.+......... .+...+.|. |+++.+|+..+.++...+|.++.++++.. .+ ..+. .
T Consensus 182 ~~~~~~~~~~g----~~p~~~~~s---pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (365)
T 1jof_A 182 LVGSVDAPDPG----DHPRWVAMH---PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGL 254 (365)
T ss_dssp EEEEEECSSTT----CCEEEEEEC---TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBS
T ss_pred EeeeEecCCCC----CCCCEeEEC---CCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccc
Confidence 44321100000 011233443 38888888776677778888887666542 12 1110 1
Q ss_pred ceE--e-eeecCCEEEEEEecCC--CCCeEEEEEcC-CCcce
Q 006979 402 DID--N-ITLGNDCLFVEGASGV--EPSSVAKVTLD-DHKLK 437 (623)
Q Consensus 402 ~v~--~-~~~~~~~~~~~~~s~~--~~~~ly~~~l~-~~~~~ 437 (623)
... . ++++++.+|+...... .+..|.+++++ +++++
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 122 3 4678888776554322 23366667664 56543
No 209
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=98.97 E-value=2.4e-09 Score=110.99 Aligned_cols=130 Identities=16% Similarity=0.099 Sum_probs=84.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-------cCCHHhH---HHHcCceEEEEECCCC-CCCCc
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-------ILNLSIQ---YWTSRGWAFVDVNYGG-STGYG 539 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-------~~~~~~~---~~a~~G~~v~~~d~rG-s~~~g 539 (623)
+|..++...+.+.+ ....|.||++||.+...... .|...+. .|+++||.|+++|+|| .++..
T Consensus 42 ~g~~l~y~~~g~~~-------~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~ 114 (377)
T 2b61_A 42 SYINVAYQTYGTLN-------DEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTT 114 (377)
T ss_dssp CSEEEEEEEESCCC-------TTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cceeEEEEeccccc-------ccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCC
Confidence 45556655554432 22347899999996544420 1444443 4778999999999999 34432
Q ss_pred hhHH-Hhh-----ccCCccchHHHHHHHHHHHHhCCCCCCCceE-EEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 540 REFR-ERL-----LGRWGIVDVNDCCSCATFLVGSGKADEKRLC-ITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 540 ~~~~-~~~-----~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
..-. +.. ...+.....+|+.+.+..+++. .+.+++. ++|||+||.+++.++ .+|++++++|...+...
T Consensus 115 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 190 (377)
T 2b61_A 115 GPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIY 190 (377)
T ss_dssp CTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSS
T ss_pred CCcccCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCcc
Confidence 2100 000 0111134567777777766654 3346888 999999999999998 89999999999998654
No 210
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=98.96 E-value=2.1e-09 Score=107.05 Aligned_cols=116 Identities=11% Similarity=-0.015 Sum_probs=82.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+.+ .|.||++||.+... ..|......|+ +||.|+.+|+||.|..... .
T Consensus 18 ~g~~l~~~~~g~~~----------~~~vl~lHG~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~--------~ 76 (299)
T 3g9x_A 18 LGERMHYVDVGPRD----------GTPVLFLHGNPTSS--YLWRNIIPHVA-PSHRCIAPDLIGMGKSDKP--------D 76 (299)
T ss_dssp TTEEEEEEEESCSS----------SCCEEEECCTTCCG--GGGTTTHHHHT-TTSCEEEECCTTSTTSCCC--------C
T ss_pred CCeEEEEEecCCCC----------CCEEEEECCCCccH--HHHHHHHHHHc-cCCEEEeeCCCCCCCCCCC--------C
Confidence 68888866654321 35789999985433 35666677775 5999999999997654331 1
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.....+|..+.+..+++. ++.+++.++|||+||++++.++ .+|++++++|...++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 134 (299)
T 3g9x_A 77 LDYFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRP 134 (299)
T ss_dssp CCCCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCC
T ss_pred CcccHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcc
Confidence 123455555555555544 2456899999999999999998 89999999999885543
No 211
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=98.96 E-value=6.3e-09 Score=105.82 Aligned_cols=118 Identities=15% Similarity=0.100 Sum_probs=81.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++..... ..|.||++||.+.. ...|...+..|+++||.|+++|+||.|.+...-. .....+
T Consensus 19 ~g~~l~y~~~G------------~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~-~~~~~~ 83 (328)
T 2cjp_A 19 NGLNMHLAELG------------EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL-NDPSKF 83 (328)
T ss_dssp TTEEEEEEEEC------------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCT-TCGGGG
T ss_pred CCcEEEEEEcC------------CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCc-CCcccc
Confidence 67777754431 12689999998543 3456677888999999999999999766533100 000111
Q ss_pred c-cchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 551 G-IVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 551 g-~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
. ....+|+.+.++.+.. +.+++.++||||||.+++.++ .+|++++++|...+.
T Consensus 84 ~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 84 SILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp SHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred cHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 1 1224566666666531 247999999999999999998 899999999987643
No 212
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.2e-07 Score=100.98 Aligned_cols=256 Identities=9% Similarity=0.046 Sum_probs=146.4
Q ss_pred CceEEEeCC--EEEEEeCCCCcEEEEeCC--CCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 006979 147 GGAFRIFGD--TVIFSNYKDQRLYKHSID--SKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 147 ~~~~~~s~d--~l~f~~~~~~~l~~~d~~--~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~ 222 (623)
+.+.+++++ .++++...++.|.++++. ++ ...+.+... ..........|+|+|++|+....+ ..
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~-~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~---------g~ 172 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSK-NVLKLRKRF--CFSKRPNAISIAEDDTTVIIADKF---------GD 172 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS-SCEEEEEEE--ECSSCEEEEEECTTSSEEEEEETT---------SE
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC-ceeeeeecc--cCCCCceEEEEcCCCCEEEEEeCC---------Cc
Confidence 445666666 455777778888888887 55 233444310 002345678899999988876542 56
Q ss_pred EEEEEcCCCCcc--cceecccCCCcccceeeCCC---CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCC
Q 006979 223 IVAIALNGQNIQ--EPKVLVSGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP 297 (623)
Q Consensus 223 L~~idl~~g~~~--~~~~l~~~~~~~~~p~wSPD---G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~ 297 (623)
++++++.++... ....+......+....|||| |++|+....+. .|+++|+..+.. ....+.+..
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~--------~i~vwd~~~~~~--~~~~~~~h~- 241 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE--------HIKISHYPQCFI--VDKWLFGHK- 241 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS--------CEEEEEESCTTC--EEEECCCCS-
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC--------cEEEEECCCCce--eeeeecCCC-
Confidence 899998876521 01123333344556789999 88887665332 388889876632 222233444
Q ss_pred CccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccc-----------------cccccCccee
Q 006979 298 TIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRP-----------------LWVFGINSYE 360 (623)
Q Consensus 298 ~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~-----------------~w~~~~~~~~ 360 (623)
..+..+.|+ ||++++.... ++ .|..+|..+++.............. ........+.
T Consensus 242 ---~~v~~~~~s-d~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 242 ---HFVSSICCG-KDYLLLSAGG-DD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp ---SCEEEEEEC-STTEEEEEES-SS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred ---CceEEEEEC-CCCEEEEEeC-CC--eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 466788999 9985555443 34 5666787777644333211000000 0011112333
Q ss_pred EEeecCCCCEEEEEEEECCeEEEEEE-eCCCCcee---ecccCCcceEeeeecCCEEEEEEecCCCCC------eEEEEE
Q 006979 361 IIQSHGEKNLIACSYRQNGRSYLGIL-DDFGHSLS---LLDIPFTDIDNITLGNDCLFVEGASGVEPS------SVAKVT 430 (623)
Q Consensus 361 ~l~~s~~~~~l~~~~~~~g~~~L~~~-d~~~~~~~---~lt~~~~~v~~~~~~~~~~~~~~~s~~~~~------~ly~~~ 430 (623)
+. ++++.+++....++.-.||.+ +..++.++ .+..+ ..+..+....+.+++...+...+. .+|.++
T Consensus 315 ~~---~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 315 KS---KNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EC---SSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred Ee---CCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 43 377777776656777777766 33343333 34333 445555333356666666555443 889888
Q ss_pred cCCCcc
Q 006979 431 LDDHKL 436 (623)
Q Consensus 431 l~~~~~ 436 (623)
.++++.
T Consensus 391 ~~~~~~ 396 (450)
T 2vdu_B 391 LNENSF 396 (450)
T ss_dssp TTTTEE
T ss_pred cCCCeE
Confidence 877764
No 213
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.96 E-value=8.9e-10 Score=119.92 Aligned_cols=127 Identities=20% Similarity=0.201 Sum_probs=88.4
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcC-CHHhHHHH-cCceEEEEECCCCC-CCCchhHHHhhccCCc
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWT-SRGWAFVDVNYGGS-TGYGREFRERLLGRWG 551 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~-~~~~~~~a-~~G~~v~~~d~rGs-~~~g~~~~~~~~~~~g 551 (623)
+...+|.|... .++.|+||++|||......... ......|+ ++|++|+.+|||-. -||...- ......+
T Consensus 95 l~lnv~~P~~~------~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~~~ 166 (537)
T 1ea5_A 95 LYLNIWVPSPR------PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQEAPG 166 (537)
T ss_dssp CEEEEEECSSC------CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSSSCS
T ss_pred CeEEEeccCCC------CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCCCcC
Confidence 55566778651 3678999999999654333221 13345677 78999999999931 1111100 0011233
Q ss_pred cchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHhcC---CCceeEEEecccCCC
Q 006979 552 IVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALAF---RDTFKAGASLYGVSI 609 (623)
Q Consensus 552 ~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~~---~~~f~a~v~~~g~~d 609 (623)
...+.|+.+|++|+.++. -.||+||.|+|+|+||++++.++.. ..+|+++|+.+|...
T Consensus 167 n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 167 NVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred ccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 345899999999998852 2799999999999999999988833 568999999999653
No 214
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=98.96 E-value=3.5e-09 Score=104.12 Aligned_cols=103 Identities=11% Similarity=0.121 Sum_probs=69.0
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|.||++||.+. ....|...+..+.++||.|+.+|+||.|........ ......+|..+.+..+++. .+.+
T Consensus 24 ~~~vv~lHG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~ 94 (279)
T 4g9e_A 24 GAPLLMIHGNSS--SGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDP-----DRSYSMEGYADAMTEVMQQ--LGIA 94 (279)
T ss_dssp EEEEEEECCTTC--CGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCH-----HHHSSHHHHHHHHHHHHHH--HTCC
T ss_pred CCeEEEECCCCC--chhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCc-----ccCCCHHHHHHHHHHHHHH--hCCC
Confidence 378999999954 334566677777888999999999997765432100 0112344444444444433 1346
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
++.++|||+||.+++.++ .+|+ +.++|...+.
T Consensus 95 ~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~ 127 (279)
T 4g9e_A 95 DAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTP 127 (279)
T ss_dssp CCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCC
T ss_pred ceEEEEECchHHHHHHHHhhCCc-ceeEEEecCC
Confidence 899999999999999999 7888 5555555443
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.96 E-value=3.3e-07 Score=95.18 Aligned_cols=243 Identities=5% Similarity=-0.089 Sum_probs=126.3
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCC-CCCCceeEEEEEEcCCCCcccceecccC--
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVAIALNGQNIQEPKVLVSG-- 242 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~-~~~~~~~~L~~idl~~g~~~~~~~l~~~-- 242 (623)
.|+++|++++ .....+..+ .. ..+.+||||+++++....... ......+.+.++|+++.+. ...+.-+
T Consensus 48 ~v~v~D~~t~-~~~~~i~~g-----~~-p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~~ 118 (373)
T 2mad_H 48 QQWVLDAGSG-SILGHVNGG-----FL-PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPDA 118 (373)
T ss_pred EEEEEECCCC-eEEEEecCC-----CC-CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCCc
Confidence 6899999876 223334432 12 268899999998876531100 0000125688999987652 2222111
Q ss_pred -----CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc----ccCcCceeCCCCc
Q 006979 243 -----SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV----ESPTEPKWSSKGE 313 (623)
Q Consensus 243 -----~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ws~DG~ 313 (623)
........|||||++|++..... ...|.++| +++..+. .++.-.. ... ....-...++||+
T Consensus 119 ~~~~~g~~p~~~~~spDG~~l~v~n~~~------~~~v~viD-~t~~~~~--~~i~~~~-~~~~~~~~~~~~~~~~~dg~ 188 (373)
T 2mad_H 119 PRFDVGPYSWMNANTPNNADLLFFQFAA------GPAVGLVV-QGGSSDD--QLLSSPT-CYHIHPGAPSTFYLLCAQGG 188 (373)
T ss_pred cccccCCCccceEECCCCCEEEEEecCC------CCeEEEEE-CCCCEEe--EEcCCCc-eEEEEeCCCceEEEEcCCCC
Confidence 12234578999999998775321 23588888 7653211 1011000 000 0000012223333
Q ss_pred --------------------------------------EEEEEeCCCCeeeEEEEecCCCeEEEEeec---ccccccccc
Q 006979 314 --------------------------------------LFFVTDRKNGFWNLHKWIESNNEVLAIYSL---DAEFSRPLW 352 (623)
Q Consensus 314 --------------------------------------l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~---~~~~~~~~w 352 (623)
++|.+.. .+++.+|..++..+.+..- ........|
T Consensus 189 ~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 189 LAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYS----GKILQADISAAGATNKAPIDALSGGRKADTW 264 (373)
T ss_pred EEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCC----ceEEEEeccCCcceEeeeeeecCCcccccce
Confidence 3333311 1566666655433322211 011112334
Q ss_pred cccCcc-eeEEeecCCCCEEEEEEEEC-------CeEEEEEEeCCCCce-eecccCCcce-EeeeecCCEEEEEEecCCC
Q 006979 353 VFGINS-YEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSL-SLLDIPFTDI-DNITLGNDCLFVEGASGVE 422 (623)
Q Consensus 353 ~~~~~~-~~~l~~s~~~~~l~~~~~~~-------g~~~L~~~d~~~~~~-~~lt~~~~~v-~~~~~~~~~~~~~~~s~~~ 422 (623)
.++... +.+ +++++.+|+..... +...|+++|++++++ +.|..+.... -.+++++++++|+....
T Consensus 265 ~p~g~~~~~~---s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~-- 339 (373)
T 2mad_H 265 RPGGWQQVAY---LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAG-- 339 (373)
T ss_pred ecCceEeEEE---CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCC--
Confidence 433221 222 45888888876432 235799999998876 5666543222 23378888566665421
Q ss_pred CCeEEEEEcCCCcc
Q 006979 423 PSSVAKVTLDDHKL 436 (623)
Q Consensus 423 ~~~ly~~~l~~~~~ 436 (623)
...|+++|+++++.
T Consensus 340 ~~~V~ViD~~t~~v 353 (373)
T 2mad_H 340 TEVLHIYDAGAGDQ 353 (373)
T ss_pred CCeEEEEECCCCCE
Confidence 25799999988874
No 216
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=98.96 E-value=5.8e-09 Score=102.83 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=79.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+.+ .+.|.||++||.+. ....|...+..|++ +|.|+++|+||.|.+... ..
T Consensus 10 ~g~~l~y~~~g~~~--------~~~~~vvllHG~~~--~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~-----~~-- 71 (266)
T 2xua_A 10 NGTELHYRIDGERH--------GNAPWIVLSNSLGT--DLSMWAPQVAALSK-HFRVLRYDTRGHGHSEAP-----KG-- 71 (266)
T ss_dssp SSSEEEEEEESCSS--------SCCCEEEEECCTTC--CGGGGGGGHHHHHT-TSEEEEECCTTSTTSCCC-----SS--
T ss_pred CCEEEEEEEcCCcc--------CCCCeEEEecCccC--CHHHHHHHHHHHhc-CeEEEEecCCCCCCCCCC-----CC--
Confidence 67788876664421 12478999999743 33456677778875 599999999997654321 11
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
....++..+.+..++++ ...+++.++|||+||.+++.++ .+|++++++|...+..
T Consensus 72 -~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~ 127 (266)
T 2xua_A 72 -PYTIEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAA 127 (266)
T ss_dssp -CCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred -CCCHHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCC
Confidence 12233333333333322 1235899999999999999988 8999999999887653
No 217
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=98.95 E-value=6.9e-09 Score=104.78 Aligned_cols=124 Identities=15% Similarity=0.046 Sum_probs=80.3
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchh
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 541 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~ 541 (623)
+...+... +|..++.....+.+ .|.||++||++..... ......|...||.|+++|+||.|.+...
T Consensus 15 ~~~~~~~~-~g~~l~~~~~g~~~----------g~~vvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 80 (317)
T 1wm1_A 15 DSGWLDTG-DGHRIYWELSGNPN----------GKPAVFIHGGPGGGIS---PHHRQLFDPERYKVLLFDQRGCGRSRPH 80 (317)
T ss_dssp EEEEEECS-SSCEEEEEEEECTT----------SEEEEEECCTTTCCCC---GGGGGGSCTTTEEEEEECCTTSTTCBST
T ss_pred eeeEEEcC-CCcEEEEEEcCCCC----------CCcEEEECCCCCcccc---hhhhhhccccCCeEEEECCCCCCCCCCC
Confidence 34456665 68777754443211 2458899998654321 1233445568999999999997654321
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
........+++.+.+..++++ ++.+++.++||||||.+++.++ .+|++++++|...+.
T Consensus 81 ------~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 81 ------ASLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp ------TCCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ------cccccccHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 011122344555555555443 2346899999999999999988 899999999987654
No 218
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.95 E-value=5.2e-07 Score=90.64 Aligned_cols=268 Identities=11% Similarity=0.022 Sum_probs=148.1
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.|+| +..++ .-. .+|...+|..... +....+.. |..++.+..++++ ..+++...++
T Consensus 23 ~~~v~~~~~s~~~~~l~-s~~---~dg~i~iw~~~~~---~~~~~~~~--------h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLA-SSS---ADKLIKIWGAYDG---KFEKTISG--------HKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp SSCEEEEEECTTSSEEE-EEE---TTSCEEEEETTTC---CEEEEECC--------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCcEEEEEECCCCCEEE-Eee---CCCeEEEEeCCCc---ccchhhcc--------CCCceEEEEEcCCCCEEEEECCCC
Confidence 34567888998 55443 322 2467667755322 22222211 2223445666665 5566666788
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCc
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~ 245 (623)
.|.++|+.++ .....+... ........|+|+++.++....+ ..|.++|+.+++. ...+......
T Consensus 88 ~i~vwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d---------~~i~iwd~~~~~~--~~~~~~~~~~ 151 (312)
T 4ery_A 88 TLKIWDVSSG-KCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFD---------ESVRIWDVKTGKC--LKTLPAHSDP 151 (312)
T ss_dssp EEEEEETTTC-CEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTCCE--EEEECCCSSC
T ss_pred EEEEEECCCC-cEEEEEcCC----CCCEEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCEE--EEEecCCCCc
Confidence 8999999876 223344332 2345667899999988776554 4588889988762 3344444445
Q ss_pred ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCee
Q 006979 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFW 325 (623)
Q Consensus 246 ~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~ 325 (623)
.....|+|||+.|+....+. .|.++|+..+.. ...+..... ..+....|+|||++++.... ++
T Consensus 152 v~~~~~~~~~~~l~~~~~d~--------~i~~wd~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~-d~-- 214 (312)
T 4ery_A 152 VSAVHFNRDGSLIVSSSYDG--------LCRIWDTASGQC--LKTLIDDDN----PPVSFVKFSPNGKYILAATL-DN-- 214 (312)
T ss_dssp EEEEEECTTSSEEEEEETTS--------CEEEEETTTCCE--EEEECCSSC----CCEEEEEECTTSSEEEEEET-TT--
T ss_pred EEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCce--eeEEeccCC----CceEEEEECCCCCEEEEEcC-CC--
Confidence 56678999999887665332 388889876632 122222222 34556889999995555544 34
Q ss_pred eEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccCCcceE
Q 006979 326 NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDID 404 (623)
Q Consensus 326 ~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~~~~v~ 404 (623)
.|..+|..+++........... .+.. ...+. +.++.++++...+|. |+++|+.+++.. .+......+.
T Consensus 215 ~i~iwd~~~~~~~~~~~~~~~~---~~~~---~~~~~---~~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~h~~~v~ 283 (312)
T 4ery_A 215 TLKLWDYSKGKCLKTYTGHKNE---KYCI---FANFS---VTGGKWIVSGSEDNL--VYIWNLQTKEIVQKLQGHTDVVI 283 (312)
T ss_dssp EEEEEETTTTEEEEEECSSCCS---SSCC---CEEEE---CSSSCEEEECCTTSC--EEEEETTTCCEEEEECCCSSCEE
T ss_pred eEEEEECCCCcEEEEEEecCCc---eEEE---EEEEE---eCCCcEEEEECCCCE--EEEEECCCchhhhhhhccCCcEE
Confidence 4666677777644333211100 0000 00111 134445555555565 455677766543 4443333344
Q ss_pred ee--eecCCEEE
Q 006979 405 NI--TLGNDCLF 414 (623)
Q Consensus 405 ~~--~~~~~~~~ 414 (623)
.+ ++++..++
T Consensus 284 ~~~~~p~~~~l~ 295 (312)
T 4ery_A 284 STACHPTENIIA 295 (312)
T ss_dssp EEEECSSSSEEE
T ss_pred EEeecCcCCceE
Confidence 44 45555443
No 219
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.95 E-value=1.2e-10 Score=127.32 Aligned_cols=127 Identities=18% Similarity=0.174 Sum_probs=83.7
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc---C----CHHhHHHHcC-ceEEEEECCCC-CCCCchhHHHh
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI---L----NLSIQYWTSR-GWAFVDVNYGG-STGYGREFRER 545 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~---~----~~~~~~~a~~-G~~v~~~d~rG-s~~~g~~~~~~ 545 (623)
++..+|.|.... . .++++|+||++|||........ + ....+.|+.+ |++|+.+|||- .-|+.......
T Consensus 81 l~lnv~~P~~~~-~--~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~ 157 (579)
T 2bce_A 81 LYLNIWVPQGRK-E--VSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSN 157 (579)
T ss_dssp CEEEEEEEECSS-S--CCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTT
T ss_pred CEEEEEECCCCC-C--CCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCC
Confidence 555667776421 0 1457899999999964322211 1 1224556654 79999999993 21221110001
Q ss_pred hccCCccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHhc---CCCceeEEEecccC
Q 006979 546 LLGRWGIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAALA---FRDTFKAGASLYGV 607 (623)
Q Consensus 546 ~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~~---~~~~f~a~v~~~g~ 607 (623)
. .+..-..|+.+|++|+.++- -.|++||.|+|+|+||+++..++. ...+|+++|+.+|.
T Consensus 158 ~---pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 158 L---PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp C---CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred C---CCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 1 22234789999999998752 379999999999999999998873 35799999999885
No 220
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=98.95 E-value=4.1e-09 Score=105.15 Aligned_cols=112 Identities=11% Similarity=0.006 Sum_probs=80.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+. ..|.||++||.+.. ...|...+..|+++ |.|+.+|+||.|..... .
T Consensus 18 ~g~~l~~~~~g------------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~-----~--- 74 (301)
T 3kda_A 18 DGVKLHYVKGG------------QGPLVMLVHGFGQT--WYEWHQLMPELAKR-FTVIAPDLPGLGQSEPP-----K--- 74 (301)
T ss_dssp TTEEEEEEEEE------------SSSEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTTSTTCCCC-----S---
T ss_pred CCeEEEEEEcC------------CCCEEEEECCCCcc--hhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCC-----C---
Confidence 68888855442 23689999999543 34567778889888 99999999997765432 1
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCc-eEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKR-LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
.....+|..+.+..+++. .+.++ +.++|||+||.+++.++ .+|++++++|...|.
T Consensus 75 ~~~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 75 TGYSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp SCSSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred CCccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 122344444444433332 12356 99999999999999988 899999999999885
No 221
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=98.95 E-value=3.4e-09 Score=98.74 Aligned_cols=96 Identities=11% Similarity=0.017 Sum_probs=71.1
Q ss_pred CCEEEEecCCCCCcccCcCCHHh-HHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~-~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
.|.||++||.+..... .|.... ..|+++||.|+.+|+|.+.. .+.++..+.+..+.+. . .
T Consensus 4 ~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~--~-~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHT--L-H 64 (192)
T ss_dssp CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGG--C-C
T ss_pred CCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHh--c-c
Confidence 5889999998543321 444444 46889999999999993221 1355555555555444 2 4
Q ss_pred CceEEEEcChHHHHHHHHh-cCCC--ceeEEEecccCCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRD--TFKAGASLYGVSI 609 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~--~f~a~v~~~g~~d 609 (623)
+++.++|||+||++++.++ .+|+ .++++|..+|...
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~ 103 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAK 103 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSS
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCC
Confidence 7999999999999999998 7898 9999999998765
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.95 E-value=2e-07 Score=93.51 Aligned_cols=226 Identities=12% Similarity=0.130 Sum_probs=128.9
Q ss_pred EEEeC--CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 150 FRIFG--DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 150 ~~~s~--d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
..+++ +.++|++...++|+++|++++ ..+.+.. ......+.++|+|+.++. .. ..|+++|
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~--~~~~~~~-----~~~~~~i~~~~dG~l~v~-~~----------~~l~~~d 79 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTK--QVQRVTM-----DAPVSSVALRQSGGYVAT-IG----------TKFCALN 79 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEEC-----SSCEEEEEEBTTSSEEEE-ET----------TEEEEEE
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCC--cEEEEeC-----CCceEEEEECCCCCEEEE-EC----------CeEEEEE
Confidence 34444 589999988889999999876 4444433 234556789999994443 21 4699999
Q ss_pred cCCCCcccceecccC---C--CcccceeeCCCCCEEEEEEecCCCC----CCCceEEEEEEecCCCceeeeEEEcCCCCC
Q 006979 228 LNGQNIQEPKVLVSG---S--DFYAFPRMDPRGERMAWIEWHHPNM----PWDKAELWVGYISENGDVYKRVCVAGFDPT 298 (623)
Q Consensus 228 l~~g~~~~~~~l~~~---~--~~~~~p~wSPDG~~la~~~~~~~~~----p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~ 298 (623)
+++++ .+.+... . .......++|||+ |++..+..... ......||.++.++. ...+....
T Consensus 80 ~~~g~---~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~~--- 148 (297)
T 3g4e_A 80 WKEQS---AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQV--- 148 (297)
T ss_dssp TTTTE---EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEEE---
T ss_pred CCCCc---EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC----EEEEeecc---
Confidence 99887 4444322 1 1234467999998 66655432110 012457888876532 22222221
Q ss_pred ccccCcCceeCCCCcEEEEEeCCCCeeeEEEEec--CCCeEE--E-EeecccccccccccccCcceeEEeecCCCCEEEE
Q 006979 299 IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE--SNNEVL--A-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 373 (623)
Q Consensus 299 ~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~--~~~~~~--~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~ 373 (623)
.....+.|+|||+.+|+++. ....|++++. .++... + +......... .+.+.+- ++| .|++
T Consensus 149 --~~pngi~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~------p~g~~~d---~~G-~lwv 214 (297)
T 3g4e_A 149 --DISNGLDWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI------PDGMCID---AEG-KLWV 214 (297)
T ss_dssp --SBEEEEEECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCE------EEEEEEB---TTS-CEEE
T ss_pred --ccccceEEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCC------CCeeEEC---CCC-CEEE
Confidence 23457899999994445554 2345666664 555432 2 2211100011 1233333 244 5666
Q ss_pred EEEECCeEEEEEEeCCCCc-eeecccCCcceEee--e-ecCCEEEEEEecC
Q 006979 374 SYRQNGRSYLGILDDFGHS-LSLLDIPFTDIDNI--T-LGNDCLFVEGASG 420 (623)
Q Consensus 374 ~~~~~g~~~L~~~d~~~~~-~~~lt~~~~~v~~~--~-~~~~~~~~~~~s~ 420 (623)
+.... ..|+++|+++++ +..+..+...+..+ . ++++++|++.+..
T Consensus 215 a~~~~--~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 215 ACYNG--GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEETT--TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEcCC--CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 55433 358899998555 45666554444444 4 6778888877643
No 223
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=98.95 E-value=3.4e-09 Score=104.36 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=70.7
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|.||++||.+. ....|...+..|+++||.|+++|+||.|.+...- ....+|..+.+..++++-.+++.
T Consensus 16 ~~~vvllHG~~~--~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~---------~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLG--SGADWQPVLSHLARTQCAALTLDLPGHGTNPERH---------CDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTC--CGGGGHHHHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCC--CHHHHHHHHHHhcccCceEEEecCCCCCCCCCCC---------ccCHHHHHHHHHHHHHHhCcCCC
Confidence 378999999843 3446777888888789999999999976654310 11234444444444443223222
Q ss_pred ceEEEEcChHHHHHHH---Hh-cCCCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLA---AL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~---~~-~~~~~f~a~v~~~g~ 607 (623)
++.++||||||.+++. ++ .+|++++++|...+.
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 4999999999999999 77 789999999987654
No 224
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=98.95 E-value=3.8e-09 Score=106.22 Aligned_cols=115 Identities=11% Similarity=0.018 Sum_probs=79.2
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc
Q 006979 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 552 (623)
Q Consensus 473 ~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~ 552 (623)
..++....-|. ...|.||++||.+.. ...|...+..|+++||.|+++|+||.|.+...- ....+..
T Consensus 33 ~~l~y~~~G~~---------~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~---~~~~~~~ 98 (297)
T 2xt0_A 33 LRMHYVDEGPR---------DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT---DDAVYTF 98 (297)
T ss_dssp CCEEEEEESCT---------TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES---CGGGCCH
T ss_pred eEEEEEEccCC---------CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC---CcccCCH
Confidence 77876555331 112578899998543 345677788899999999999999976553210 0011111
Q ss_pred -chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 553 -VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 553 -~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
...+|+.+.++.+. .+++.++||||||.+++.++ .+|+++++.|...+.
T Consensus 99 ~~~a~dl~~ll~~l~------~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 149 (297)
T 2xt0_A 99 GFHRRSLLAFLDALQ------LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTA 149 (297)
T ss_dssp HHHHHHHHHHHHHHT------CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhC------CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCC
Confidence 12345555555442 36899999999999999988 899999999988763
No 225
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=98.94 E-value=8.7e-09 Score=103.82 Aligned_cols=124 Identities=15% Similarity=0.044 Sum_probs=79.8
Q ss_pred EEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchh
Q 006979 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGRE 541 (623)
Q Consensus 462 ~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~ 541 (623)
+...+... +|..++...+-+. ..|.||++||++..... ......|..+||.|+++|+||.|.+...
T Consensus 12 ~~~~~~~~-~g~~l~y~~~G~~----------~g~pvvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 77 (313)
T 1azw_A 12 QQGSLKVD-DRHTLYFEQCGNP----------HGKPVVMLHGGPGGGCN---DKMRRFHDPAKYRIVLFDQRGSGRSTPH 77 (313)
T ss_dssp EEEEEECS-SSCEEEEEEEECT----------TSEEEEEECSTTTTCCC---GGGGGGSCTTTEEEEEECCTTSTTSBST
T ss_pred ccceEEcC-CCCEEEEEecCCC----------CCCeEEEECCCCCcccc---HHHHHhcCcCcceEEEECCCCCcCCCCC
Confidence 34456655 6777775444321 12458899998654322 2233445568999999999996654321
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
........+++.+.+..++++ ...+++.++||||||.+++.++ .+|++++++|...+.
T Consensus 78 ------~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 78 ------ADLVDNTTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp ------TCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ------cccccccHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 011122344444444444443 1236899999999999999998 899999999987664
No 226
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=98.94 E-value=3.9e-09 Score=112.98 Aligned_cols=101 Identities=16% Similarity=0.084 Sum_probs=75.4
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
|.||++||++.. ...|...+..|+++||.|+.+|+||.|...... ..+.. ...+|+.++++++ +.+
T Consensus 25 p~VV~lHG~~~~--~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~-----~~~s~~~~a~dl~~~l~~l------~~~ 91 (456)
T 3vdx_A 25 VPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRGFGQSSQPT-----TGYDYDTFAADLNTVLETL------DLQ 91 (456)
T ss_dssp EEEEEECCTTCC--GGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS-----SCCSHHHHHHHHHHHHHHH------TCC
T ss_pred CEEEEECCCCCc--HHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHh------CCC
Confidence 789999999543 345677888999999999999999976654321 11111 1245666666665 346
Q ss_pred ceEEEEcChHHHHHHHHh-cC-CCceeEEEecccCCC
Q 006979 575 RLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGVSI 609 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~~d 609 (623)
+|.++|||+||++++.++ .+ |+.++++|...|..+
T Consensus 92 ~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~ 128 (456)
T 3vdx_A 92 DAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEP 128 (456)
T ss_dssp SEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCS
T ss_pred CeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccc
Confidence 999999999999888777 55 899999999998764
No 227
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=98.94 E-value=6.9e-09 Score=103.90 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=78.9
Q ss_pred CC-eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCC-CCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhcc
Q 006979 471 PG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLG 548 (623)
Q Consensus 471 dg-~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg-~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~ 548 (623)
+| ..++....- .++.|.||++||. |+......|...+..|+++ |.|+++|+||.|.+...- .
T Consensus 21 ~g~~~l~y~~~G----------~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-----~ 84 (291)
T 2wue_A 21 DGPLKLHYHEAG----------VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRA-----E 84 (291)
T ss_dssp SSEEEEEEEEEC----------TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTSTTSCCCS-----C
T ss_pred CCcEEEEEEecC----------CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCCCCCCCCC-----C
Confidence 67 777754432 1223689999997 4333344566667778766 999999999976543310 0
Q ss_pred CCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 549 RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 549 ~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.....++..+.+..++++ .+.+++.|+|||+||.+++.++ .+|++++++|...+..
T Consensus 85 --~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 141 (291)
T 2wue_A 85 --HGQFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGG 141 (291)
T ss_dssp --CSSHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSS
T ss_pred --CCcCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCC
Confidence 012344444433333332 1236899999999999999998 8999999999988753
No 228
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=98.94 E-value=3.8e-09 Score=104.79 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=73.7
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhC-CCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS-GKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~-~~~d~~ 574 (623)
|.||++||.+.. ...|...+..|+++||.|+++|+||.|.+.... . ....+++..+.+..+++. +. .+
T Consensus 5 ~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~----~---~~~~~~~~a~dl~~~l~~l~~--~~ 73 (273)
T 1xkl_A 5 KHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAASGTDLRKI----E---ELRTLYDYTLPLMELMESLSA--DE 73 (273)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG----G---GCCSHHHHHHHHHHHHHTSCS--SS
T ss_pred CeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCCCCCCccCc----c---cccCHHHHHHHHHHHHHHhcc--CC
Confidence 679999998533 335777888999999999999999976553211 0 112355555544444443 21 36
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
++.++||||||++++.++ .+|++++++|...+.
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~ 107 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAF 107 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEecc
Confidence 999999999999999988 899999999987763
No 229
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=98.93 E-value=5.7e-10 Score=114.89 Aligned_cols=111 Identities=18% Similarity=0.243 Sum_probs=79.3
Q ss_pred CCEEEEecCCCCCccc---CcCC-----------HHhHHHHcCceEEEEECCCCCCCCchhHHHhh--ccCCc-cchHHH
Q 006979 495 PPLLVKSHGGPTSEAR---GILN-----------LSIQYWTSRGWAFVDVNYGGSTGYGREFRERL--LGRWG-IVDVND 557 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~---~~~~-----------~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~--~~~~g-~~~~~D 557 (623)
.|.||++||.+..... ..|. ..++.|+++||.|+.+|+||.|.......... ...+. ....+|
T Consensus 50 ~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~d 129 (354)
T 2rau_A 50 NDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISD 129 (354)
T ss_dssp EEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHHH
T ss_pred CCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHHH
Confidence 4789999998654431 1222 57788999999999999999665432110000 00222 223578
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-CCceeEEEecccC
Q 006979 558 CCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGV 607 (623)
Q Consensus 558 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~ 607 (623)
+.++++++.++ .+.+++.++|||+||++++.++ .+ |++++++|+.++.
T Consensus 130 ~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~ 179 (354)
T 2rau_A 130 IKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179 (354)
T ss_dssp HHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCS
T ss_pred HHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccc
Confidence 88999998765 3457999999999999999988 77 9999999998553
No 230
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=98.93 E-value=1e-09 Score=107.07 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=70.8
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccc-hHHHHHHHHHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIV-DVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~-~~~D~~~~~~~l~~~~~~d~~ 574 (623)
|.||++||.+.. ...|...+..|+++||.|+++|+||.|..... ...+... ..+|+.++++++.+.+ .+
T Consensus 17 ~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~-----~~~~~~~~~~~d~~~~~~~l~~~~---~~ 86 (247)
T 1tqh_A 17 RAVLLLHGFTGN--SADVRMLGRFLESKGYTCHAPIYKGHGVPPEE-----LVHTGPDDWWQDVMNGYEFLKNKG---YE 86 (247)
T ss_dssp CEEEEECCTTCC--THHHHHHHHHHHHTTCEEEECCCTTSSSCHHH-----HTTCCHHHHHHHHHHHHHHHHHHT---CC
T ss_pred cEEEEECCCCCC--hHHHHHHHHHHHHCCCEEEecccCCCCCCHHH-----hcCCCHHHHHHHHHHHHHHHHHcC---CC
Confidence 578899998433 33566778889999999999999997643211 1112222 2466777777777654 36
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEeccc
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYG 606 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g 606 (623)
++.++||||||.+++.++ .+| ++++|...+
T Consensus 87 ~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~ 117 (247)
T 1tqh_A 87 KIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCA 117 (247)
T ss_dssp CEEEEEETHHHHHHHHHHTTSC--CSCEEEESC
T ss_pred eEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcc
Confidence 899999999999999988 777 777775443
No 231
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=98.93 E-value=1.8e-09 Score=99.73 Aligned_cols=100 Identities=20% Similarity=0.193 Sum_probs=75.0
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCce---EEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGW---AFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 571 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~---~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~ 571 (623)
.|.||++||... ....|...++.|+++|| .|+.+|+||.+.... ...+++.+.++.++++ .
T Consensus 3 ~~~vv~~HG~~~--~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGG--ASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTC--CGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCC--CHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--c
Confidence 367899999853 34466778899999998 599999999665432 1234555555544443 2
Q ss_pred CCCceEEEEcChHHHHHHHHh-cC--CCceeEEEecccCCCH
Q 006979 572 DEKRLCITGGSAGGYTTLAAL-AF--RDTFKAGASLYGVSIP 610 (623)
Q Consensus 572 d~~rv~i~G~S~GG~~~~~~~-~~--~~~f~a~v~~~g~~d~ 610 (623)
+.+++.++|||+||.+++.++ .+ |+.++++|..+|...+
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~ 108 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRL 108 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGG
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccc
Confidence 457999999999999999998 66 8899999999998654
No 232
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.93 E-value=1.5e-07 Score=97.44 Aligned_cols=169 Identities=7% Similarity=-0.074 Sum_probs=87.1
Q ss_pred eEEEeCC--EEEEEeCCCCcEEEEeCC-CCCCCceecCCCCCCCCeeecceeeCCCCCEE-EEEEeccCCCCC-C----c
Q 006979 149 AFRIFGD--TVIFSNYKDQRLYKHSID-SKDSSPLPITPDYGEPLVSYADGIFDPRFNRY-VTVREDRRQDAL-N----S 219 (623)
Q Consensus 149 ~~~~s~d--~l~f~~~~~~~l~~~d~~-~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l-~~v~~~~~~~~~-~----~ 219 (623)
..++++| .++..+. + .|.+++++ ++ ...++.... . ........|||||+++ +++......... . .
T Consensus 44 ~~a~spdg~~l~~~~~-~-~v~~~~~~~~g--~~~~~~~~~-~-~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 44 WMTFDHERKNIYGAAM-K-KWSSFAVKSPT--EIVHEASHP-I-GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp EEEECTTSSEEEEEEB-T-EEEEEEEEETT--EEEEEEEEE-C-CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred EEEECCCCCEEEEEcc-c-eEEEEEECCCC--CEEEeeEee-c-CCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 4555655 3554443 3 68888875 55 333332110 0 0113457899999974 344320000000 0 0
Q ss_pred eeEEEEEEcC-CCCcccceecc----cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEec-CCCceeeeEEEc
Q 006979 220 TTEIVAIALN-GQNIQEPKVLV----SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENGDVYKRVCVA 293 (623)
Q Consensus 220 ~~~L~~idl~-~g~~~~~~~l~----~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~-~~~~~~~~~~~~ 293 (623)
...+.+++++ .|+. ...+. ........+.|||||++|+... .. ...|++++++ ++. +.....+.
T Consensus 118 ~g~v~v~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~-~~------~~~v~~~~~~~~g~-~~~~~~~~ 187 (365)
T 1jof_A 118 AGYGNVFSVSETGKL--EKNVQNYEYQENTGIHGMVFDPTETYLYSAD-LT------ANKLWTHRKLASGE-VELVGSVD 187 (365)
T ss_dssp CCEEEEEEECTTCCE--EEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TT------TTEEEEEEECTTSC-EEEEEEEE
T ss_pred CceEEEEccCCCCcC--cceEeeEEeCCCCcceEEEECCCCCEEEEEc-CC------CCEEEEEEECCCCC-EEEeeeEe
Confidence 1345566664 2441 12222 1234456688999999886553 21 2368999987 442 11111121
Q ss_pred --CCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeE
Q 006979 294 --GFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV 337 (623)
Q Consensus 294 --~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~ 337 (623)
... ..+..+.|+|||+.+|+.+...+.-.+|.+|..+++.
T Consensus 188 ~~~~g----~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 188 APDPG----DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp CSSTT----CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred cCCCC----CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 111 3455779999999555554425666777777766654
No 233
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.92 E-value=1.3e-07 Score=95.99 Aligned_cols=189 Identities=6% Similarity=0.004 Sum_probs=116.3
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
..+++++ ..+++...++.+.++++.++ .....+... ........|+|||++|+....+ ..|.++|
T Consensus 127 ~~~~spdg~~l~~g~~dg~v~i~~~~~~-~~~~~~~~~----~~~v~~~~~spdg~~lasg~~d---------g~i~iwd 192 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTHVGKVNIFGVESG-KKEYSLDTR----GKFILSIAYSPDGKYLASGAID---------GIINIFD 192 (321)
T ss_dssp CEEECTTSSEEEEECTTSEEEEEETTTC-SEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------SCEEEEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCCC-ceeEEecCC----CceEEEEEECCCCCEEEEEcCC---------CeEEEEE
Confidence 4556655 45566667888999999876 222333322 2345678899999998876554 4588889
Q ss_pred cCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce
Q 006979 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (623)
+.+++. +..+......+...+|||||++|+....|. .|.++|+..+. ....+.+.. ..+..+.
T Consensus 193 ~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg--------~i~iwd~~~~~---~~~~~~~h~----~~v~~~~ 255 (321)
T 3ow8_A 193 IATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDG--------YIKIYDVQHAN---LAGTLSGHA----SWVLNVA 255 (321)
T ss_dssp TTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTS--------CEEEEETTTCC---EEEEECCCS----SCEEEEE
T ss_pred CCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCC--------eEEEEECCCcc---eeEEEcCCC----CceEEEE
Confidence 988762 333443334456788999999887665332 38888987663 334455544 4567889
Q ss_pred eCCCCcEEEEEeCCCCeeeEEEEecCCCeEE-EEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 308 ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
|+|||++++.... ++. |..+|..+++.. .+......+....|.+ +++.| ++...+|.-+||
T Consensus 256 ~sp~~~~l~s~s~-D~~--v~iwd~~~~~~~~~~~~h~~~v~~v~~s~------------~g~~l-~s~~~d~~i~vw 317 (321)
T 3ow8_A 256 FCPDDTHFVSSSS-DKS--VKVWDVGTRTCVHTFFDHQDQVWGVKYNG------------NGSKI-VSVGDDQEIHIY 317 (321)
T ss_dssp ECTTSSEEEEEET-TSC--EEEEETTTTEEEEEECCCSSCEEEEEECT------------TSSEE-EEEETTCCEEEE
T ss_pred ECCCCCEEEEEeC-CCc--EEEEeCCCCEEEEEEcCCCCcEEEEEECC------------CCCEE-EEEeCCCeEEEE
Confidence 9999995555444 354 555677676543 3322222333333332 55544 455566766665
No 234
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=98.92 E-value=6e-09 Score=103.71 Aligned_cols=102 Identities=12% Similarity=0.038 Sum_probs=73.4
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+.......|...+..|+ +||.|+.+|+||.|.... ........+|+.+.+..++++- ..++
T Consensus 42 p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~~--~~~~ 111 (292)
T 3l80_A 42 PCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPV-------SNQANVGLRDWVNAILMIFEHF--KFQS 111 (292)
T ss_dssp SEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCC-------CCCTTCCHHHHHHHHHHHHHHS--CCSE
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCC-------CCcccccHHHHHHHHHHHHHHh--CCCC
Confidence 89999997433333345666676676 699999999999665431 1111234666666666555542 2359
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
+.++|||+||.+++.++ .+|++++++|...|.
T Consensus 112 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 112 YLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp EEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred eEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 99999999999999998 899999999999843
No 235
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.92 E-value=3.2e-07 Score=96.23 Aligned_cols=277 Identities=11% Similarity=0.066 Sum_probs=151.7
Q ss_pred CceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcEEE
Q 006979 92 GGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLYK 169 (623)
Q Consensus 92 ~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l~~ 169 (623)
..+.++| +..++.... +|...+|..... +....+... .. .....++++ ..+++...++.|.+
T Consensus 60 ~~~~~s~~g~~l~~~~~----d~~v~i~d~~~~---~~~~~~~~~-~~--------~~~~~~~~~~~~l~~~~~dg~i~i 123 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARL----DGHDFLFNTIIR---DGSKMLKRA-DY--------TAVDTAKLQMRRFILGTTEGDIKV 123 (420)
T ss_dssp TTCEEEEEETTEEEEEE----TTEEEEEECCSE---ETTTTSCSC-CE--------EEEEEECSSSCEEEEEETTSCEEE
T ss_pred cceeeeecCCeEEEEEc----CCcEEEEEeccc---ceeeEEecC-Cc--------eEEEEEecCCCEEEEEECCCCEEE
Confidence 3678888 777765542 366666654322 222222111 00 011122333 44555557788999
Q ss_pred EeCCCCCCCceec-CCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccc
Q 006979 170 HSIDSKDSSPLPI-TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAF 248 (623)
Q Consensus 170 ~d~~~g~~~~~~L-t~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~ 248 (623)
+|+.++ ..... ... ........|+|+|+.|+....+ ..|.++|+.+++. +..+......+..
T Consensus 124 wd~~~~--~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~d---------~~i~iwd~~~~~~--~~~~~~h~~~v~~ 186 (420)
T 3vl1_A 124 LDSNFN--LQREIDQAH----VSEITKLKFFPSGEALISSSQD---------MQLKIWSVKDGSN--PRTLIGHRATVTD 186 (420)
T ss_dssp ECTTSC--EEEEETTSS----SSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCC--CEEEECCSSCEEE
T ss_pred EeCCCc--ceeeecccc----cCccEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCcC--ceEEcCCCCcEEE
Confidence 999876 33333 222 3456778999999988776553 5689999988752 4445444455667
Q ss_pred eeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCC-C-C------------------ccccCcCcee
Q 006979 249 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD-P-T------------------IVESPTEPKW 308 (623)
Q Consensus 249 p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~-~-~------------------~~~~~~~~~w 308 (623)
..|+|||++|+....+. .|.++|+..+. ....+.... . . -...+..+.|
T Consensus 187 ~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 187 IAIIDRGRNVLSASLDG--------TIRLWECGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp EEEETTTTEEEEEETTS--------CEEEEETTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred EEEcCCCCEEEEEcCCC--------cEEEeECCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 88999999988666443 27777877652 222222110 0 0 0034567889
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeec--ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSL--DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~--~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
+|||++++.... +|. |..+|+.+++....... ...+....|. |+++.++++...+|. |.++
T Consensus 256 s~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~------------~~~~~~l~~g~~dg~--i~vw 318 (420)
T 3vl1_A 256 GTYGKYVIAGHV-SGV--ITVHNVFSKEQTIQLPSKFTCSCNSLTVD------------GNNANYIYAGYENGM--LAQW 318 (420)
T ss_dssp SCTTEEEEEEET-TSC--EEEEETTTCCEEEEECCTTSSCEEEEEEC------------SSCTTEEEEEETTSE--EEEE
T ss_pred cCCCCEEEEEcC-CCe--EEEEECCCCceeEEcccccCCCceeEEEe------------CCCCCEEEEEeCCCe--EEEE
Confidence 999985555554 454 55667766653322221 1222223333 266646666666665 4455
Q ss_pred eCCCCc--eeeccc-CCcceEee-eecCCEEEEEEecCCCCCeEEEEEcCC
Q 006979 387 DDFGHS--LSLLDI-PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 387 d~~~~~--~~~lt~-~~~~v~~~-~~~~~~~~~~~~s~~~~~~ly~~~l~~ 433 (623)
|+.+++ +..+.. ....+..+ .++ +.++++++. ...+...++..
T Consensus 319 d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~---d~~v~iw~~~~ 365 (420)
T 3vl1_A 319 DLRSPECPVGEFLINEGTPINNVYFAA-GALFVSSGF---DTSIKLDIISD 365 (420)
T ss_dssp ETTCTTSCSEEEEESTTSCEEEEEEET-TEEEEEETT---TEEEEEEEECC
T ss_pred EcCCCcCchhhhhccCCCCceEEEeCC-CCEEEEecC---CccEEEEeccC
Confidence 776553 344443 23335555 444 444444432 23456666554
No 236
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.92 E-value=3.7e-07 Score=100.11 Aligned_cols=228 Identities=13% Similarity=0.088 Sum_probs=134.6
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
+.+++++ ..+++...++.|.++++.+. ....+... ........++|+|++|+....+ ..+.++|
T Consensus 308 ~~~~~~~~~~l~t~~~d~~i~~w~~~~~--~~~~~~~~----~~~v~~~~~s~~g~~l~~~~~d---------g~v~~~~ 372 (577)
T 2ymu_A 308 GVAFSPDGQTIASASDDKTVKLWNRNGQ--HLQTLTGH----SSSVWGVAFSPDGQTIASASDD---------KTVKLWN 372 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSC--EEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCC--eeEEEeCC----CCCEEEEEECCCCCEEEEEeCC---------CEEEEEc
Confidence 4455555 45555557788999998754 44555432 3345567899999998876543 4577778
Q ss_pred cCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce
Q 006979 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (623)
..+.. ...+......+...+|||||++|+....+ ..|.+++..+. ....+.+.. ..+....
T Consensus 373 ~~~~~---~~~~~~~~~~v~~~~~s~dg~~l~~~~~d--------~~v~~~~~~~~----~~~~~~~~~----~~v~~~~ 433 (577)
T 2ymu_A 373 RNGQL---LQTLTGHSSSVRGVAFSPDGQTIASASDD--------KTVKLWNRNGQ----LLQTLTGHS----SSVWGVA 433 (577)
T ss_dssp TTCCE---EEEEECCSSCEEEEEECTTSSCEEEEETT--------SEEEEECTTCC----EEEEEECCS----SCEEEEE
T ss_pred CCCCE---EEEecCCCCCeEEEEECCCCCEEEEEeCC--------CEEEEEeCCCC----EEEEecCCC----CCeEEEE
Confidence 75543 44454444445567899999999876533 24777775433 333444444 4566789
Q ss_pred eCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 308 ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
|+||++++..... ++. |..+|..+...+.+......+....|+ |+++.|+ +...++.-+| +|
T Consensus 434 ~s~d~~~l~~~~~-d~~--v~~w~~~~~~~~~~~~~~~~v~~~~~s------------pd~~~la-s~~~d~~i~i--w~ 495 (577)
T 2ymu_A 434 FSPDDQTIASASD-DKT--VKLWNRNGQLLQTLTGHSSSVRGVAFS------------PDGQTIA-SASDDKTVKL--WN 495 (577)
T ss_dssp ECTTSSEEEEEET-TSE--EEEEETTSCEEEEEECCSSCEEEEEEC------------TTSCEEE-EEETTSEEEE--EE
T ss_pred ECCCCCEEEEEcC-CCE--EEEEECCCCEEEEEcCCCCCEEEEEEc------------CCCCEEE-EEeCCCEEEE--Ec
Confidence 9999995544444 344 445566555555555433333333333 2666544 4445665444 56
Q ss_pred CCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 388 DFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 388 ~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
.++..++.+......+..+ ++++..++ +++.. ..|...+..
T Consensus 496 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-s~~~d---g~v~lwd~~ 538 (577)
T 2ymu_A 496 RNGQLLQTLTGHSSSVRGVAFSPDGQTIA-SASDD---KTVKLWNRN 538 (577)
T ss_dssp TTSCEEEEEECCSSCEEEEEECTTSSCEE-EEETT---SEEEEECTT
T ss_pred CCCCEEEEEeCCCCCEEEEEEcCCCCEEE-EEECc---CEEEEEeCC
Confidence 7666666666555556655 56666544 33322 346666653
No 237
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=98.91 E-value=4e-09 Score=106.78 Aligned_cols=115 Identities=15% Similarity=0.094 Sum_probs=79.3
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc
Q 006979 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI 552 (623)
Q Consensus 473 ~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~ 552 (623)
..++....-|. ..-|.||++||.+... ..|...+..|+++||.|+++|.||.|.+...- ....+..
T Consensus 34 ~~l~y~~~G~~---------~~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~---~~~~y~~ 99 (310)
T 1b6g_A 34 LRAHYLDEGNS---------DAEDVFLCLHGEPTWS--YLYRKMIPVFAESGARVIAPDFFGFGKSDKPV---DEEDYTF 99 (310)
T ss_dssp CEEEEEEEECT---------TCSCEEEECCCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTSTTSCEES---CGGGCCH
T ss_pred eEEEEEEeCCC---------CCCCEEEEECCCCCch--hhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC---CcCCcCH
Confidence 77876554331 1026799999986433 36667788899999999999999966543210 0011111
Q ss_pred -chHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 553 -VDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 553 -~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
...+|+.+.++.| + .+++.++||||||.+++.++ .+|+++++.|...+.
T Consensus 100 ~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~ 150 (310)
T 1b6g_A 100 EFHRNFLLALIERL---D---LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAX 150 (310)
T ss_dssp HHHHHHHHHHHHHH---T---CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHc---C---CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccc
Confidence 1234555555544 2 36899999999999999998 899999999988764
No 238
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.91 E-value=2.1e-07 Score=102.08 Aligned_cols=215 Identities=13% Similarity=0.077 Sum_probs=128.3
Q ss_pred ceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 148 ~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
.+.+++++ ..+.+...++.|.+++..+. ....+... ........|+|||++|+....+ ..|.++
T Consensus 348 ~~~~~s~~g~~l~~~~~dg~v~~~~~~~~--~~~~~~~~----~~~v~~~~~s~dg~~l~~~~~d---------~~v~~~ 412 (577)
T 2ymu_A 348 WGVAFSPDGQTIASASDDKTVKLWNRNGQ--LLQTLTGH----SSSVRGVAFSPDGQTIASASDD---------KTVKLW 412 (577)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTCC--EEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEcCCCC--EEEEecCC----CCCeEEEEECCCCCEEEEEeCC---------CEEEEE
Confidence 34555555 44455556778888887543 34444432 2345678899999988876543 457778
Q ss_pred EcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCc
Q 006979 227 ALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (623)
|..+.. .+.+......+....||||+++|+....+ ..|.+++.++. ....+.+.. ..+...
T Consensus 413 ~~~~~~---~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--------~~v~~w~~~~~----~~~~~~~~~----~~v~~~ 473 (577)
T 2ymu_A 413 NRNGQL---LQTLTGHSSSVWGVAFSPDDQTIASASDD--------KTVKLWNRNGQ----LLQTLTGHS----SSVRGV 473 (577)
T ss_dssp CTTCCE---EEEEECCSSCEEEEEECTTSSEEEEEETT--------SEEEEEETTSC----EEEEEECCS----SCEEEE
T ss_pred eCCCCE---EEEecCCCCCeEEEEECCCCCEEEEEcCC--------CEEEEEECCCC----EEEEEcCCC----CCEEEE
Confidence 875543 44554444455667899999998876533 24777786543 334444444 456778
Q ss_pred eeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 307 ~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
.|+|||+++..... ++. |..+|..+...+.+......+....|+ |+++.|+ +...+|.-+| +
T Consensus 474 ~~spd~~~las~~~-d~~--i~iw~~~~~~~~~~~~h~~~v~~l~~s------------~dg~~l~-s~~~dg~v~l--w 535 (577)
T 2ymu_A 474 AFSPDGQTIASASD-DKT--VKLWNRNGQLLQTLTGHSSSVRGVAFS------------PDGQTIA-SASDDKTVKL--W 535 (577)
T ss_dssp EECTTSCEEEEEET-TSE--EEEEETTSCEEEEEECCSSCEEEEEEC------------TTSSCEE-EEETTSEEEE--E
T ss_pred EEcCCCCEEEEEeC-CCE--EEEEcCCCCEEEEEeCCCCCEEEEEEc------------CCCCEEE-EEECcCEEEE--E
Confidence 99999995555544 454 445565554455554333333333333 2666554 4555665444 5
Q ss_pred eCCCCceeecccCCcceEee--eecCCEEE
Q 006979 387 DDFGHSLSLLDIPFTDIDNI--TLGNDCLF 414 (623)
Q Consensus 387 d~~~~~~~~lt~~~~~v~~~--~~~~~~~~ 414 (623)
|..+..+..+......+..+ +++++.++
T Consensus 536 d~~~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 536 NRNGQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp CTTSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred eCCCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 76666566665544556555 56666544
No 239
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=98.91 E-value=7.2e-09 Score=103.13 Aligned_cols=118 Identities=18% Similarity=0.084 Sum_probs=76.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCC-CCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGR 549 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg-~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~ 549 (623)
+|..++.....+ ...|+||++||. |+......|...+..|+++ |.|+++|+||.|.+.... .
T Consensus 15 ~g~~l~y~~~g~----------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~-----~- 77 (285)
T 1c4x_A 15 GTLASHALVAGD----------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFGQSEYPE-----T- 77 (285)
T ss_dssp TTSCEEEEEESC----------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTSTTSCCCS-----S-
T ss_pred CCEEEEEEecCC----------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCCCCCCCC-----C-
Confidence 577777544321 224779999997 3223334555666777765 999999999976543210 0
Q ss_pred CccchHHHH----HHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 550 WGIVDVNDC----CSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 550 ~g~~~~~D~----~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.....++. .+.+..++++ .+.+++.++||||||.+++.++ .+|++++++|...+..
T Consensus 78 -~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 138 (285)
T 1c4x_A 78 -YPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVG 138 (285)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred -cccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCC
Confidence 01123333 3333322222 1236899999999999999988 8999999999988754
No 240
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=98.91 E-value=5e-09 Score=97.86 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=67.7
Q ss_pred CCCEEEEecCCCCCcc-cCcCCH-HhHHHHcC-ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 494 KPPLLVKSHGGPTSEA-RGILNL-SIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~-~~~~~~-~~~~~a~~-G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
+.|.||++||++.... ...+.. ....|+++ ||.|+.+|+||.... +....++.+.+.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~------------------~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA------------------RESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC------------------CHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc------------------cHHHHHHHHHHHhC
Confidence 3589999999965432 233444 67788888 999999999984210 12233334443311
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
+ .+++.++|||+||++++.++ .+| ++++|..+|..+
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~ 101 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTS 101 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSS
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCcc
Confidence 2 37999999999999999998 777 999999988754
No 241
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=98.90 E-value=3.6e-09 Score=103.87 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=73.4
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+. ....|...+..|+++||.|+++|+||.|.+.... . ....+++..+.+..++++-. ..++
T Consensus 4 ~~vvllHG~~~--~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~----~---~~~~~~~~a~dl~~~l~~l~-~~~~ 73 (257)
T 3c6x_A 4 AHFVLIHTICH--GAWIWHKLKPLLEALGHKVTALDLAASGVDPRQI----E---EIGSFDEYSEPLLTFLEALP-PGEK 73 (257)
T ss_dssp CEEEEECCTTC--CGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG----G---GCCSHHHHTHHHHHHHHTSC-TTCC
T ss_pred CcEEEEcCCcc--CcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc----c---cccCHHHHHHHHHHHHHhcc-ccCC
Confidence 56899999853 3345777889999999999999999976653210 0 11234555544444444310 1368
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
+.++||||||++++.++ .+|+++++.|...+.
T Consensus 74 ~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~ 106 (257)
T 3c6x_A 74 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSV 106 (257)
T ss_dssp EEEEEEETHHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eEEEEECcchHHHHHHHHhCchhhheEEEEecc
Confidence 99999999999999999 889999999987653
No 242
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=98.90 E-value=4.9e-09 Score=104.42 Aligned_cols=103 Identities=13% Similarity=0.078 Sum_probs=69.0
Q ss_pred CEEEEecCCC-CCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGP-TSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~-~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
|.||++||.. .......|......| ++||.|+++|+||.|.+...- .. ....++..+.+..++++ ...+
T Consensus 26 ~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~~----~~---~~~~~~~a~dl~~~l~~--l~~~ 95 (282)
T 1iup_A 26 QPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRPE----NY---NYSKDSWVDHIIGIMDA--LEIE 95 (282)
T ss_dssp SEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCCT----TC---CCCHHHHHHHHHHHHHH--TTCC
T ss_pred CeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCCC----CC---CCCHHHHHHHHHHHHHH--hCCC
Confidence 4699999953 222112444455566 678999999999966543210 00 12344444444443333 1246
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.++||||||.+++.++ .+|++++++|...+..
T Consensus 96 ~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~ 130 (282)
T 1iup_A 96 KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAG 130 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCC
T ss_pred ceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCcc
Confidence 899999999999999998 8999999999988754
No 243
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=98.89 E-value=5.1e-09 Score=104.14 Aligned_cols=103 Identities=9% Similarity=0.054 Sum_probs=72.6
Q ss_pred CCEEEEecCCCCCcccCcCC-HHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~-~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
.|.||++||.+... ..|. .....++++||.|+++|+||.| .+-. .. ....++..+.+..+++. ++.
T Consensus 43 ~~~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G---~s~~---~~---~~~~~~~~~~~~~~l~~--l~~ 109 (293)
T 3hss_A 43 GDPVVFIAGRGGAG--RTWHPHQVPAFLAAGYRCITFDNRGIG---ATEN---AE---GFTTQTMVADTAALIET--LDI 109 (293)
T ss_dssp SEEEEEECCTTCCG--GGGTTTTHHHHHHTTEEEEEECCTTSG---GGTT---CC---SCCHHHHHHHHHHHHHH--HTC
T ss_pred CCEEEEECCCCCch--hhcchhhhhhHhhcCCeEEEEccCCCC---CCCC---cc---cCCHHHHHHHHHHHHHh--cCC
Confidence 47899999985433 3455 4677888999999999999964 3211 11 12334443333333332 134
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
+++.++|||+||.+++.++ .+|++++++|...|....
T Consensus 110 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 147 (293)
T 3hss_A 110 APARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRL 147 (293)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSC
T ss_pred CcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccC
Confidence 6899999999999999888 889999999999997654
No 244
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.89 E-value=2.2e-07 Score=92.79 Aligned_cols=234 Identities=14% Similarity=0.087 Sum_probs=134.7
Q ss_pred eEEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 149 AFRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 149 ~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
..+++++ .+++++..++.|++++++++ .+.+... ........++|+|+.++. .... ..|+++
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~----~~~~~~l~~~~dg~l~v~-~~~~--------~~i~~~ 95 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHP----SHHQNGHCLNKQGHLIAC-SHGL--------RRLERQ 95 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESS----CSSEEEEEECTTCCEEEE-ETTT--------TEEEEE
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECC----CCCcceeeECCCCcEEEE-ecCC--------CeEEEE
Confidence 3445544 58999888888999999754 4444332 233456789999985443 2211 569999
Q ss_pred EcCCCCcccceecccC-----CCcccceeeCCCCCEEEEEEec----------CCCCCCCceEEEEEEecCCCceeeeEE
Q 006979 227 ALNGQNIQEPKVLVSG-----SDFYAFPRMDPRGERMAWIEWH----------HPNMPWDKAELWVGYISENGDVYKRVC 291 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~-----~~~~~~p~wSPDG~~la~~~~~----------~~~~p~~~~~L~v~d~~~~~~~~~~~~ 291 (623)
|+.+++ .+.+... ........++|||+ |++.... .....-....||.++.+ + . ...+
T Consensus 96 d~~~g~---~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~--~~~~ 167 (296)
T 3e5z_A 96 REPGGE---WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-T--LSAP 167 (296)
T ss_dssp CSTTCC---EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-C--EEEE
T ss_pred cCCCCc---EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C-C--EEEe
Confidence 997776 4444321 12234578999997 5554210 00000013478888766 3 1 2222
Q ss_pred EcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecC-CCeE---EEEeecccccccccccccCcceeEEeecCC
Q 006979 292 VAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGE 367 (623)
Q Consensus 292 ~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~-~~~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~ 367 (623)
.... ..+..+.|+|||+++ +++. +...|++++++ +++. ..+. . ..... ...+.+. ++
T Consensus 168 -~~~~----~~~~gi~~s~dg~~l-v~~~--~~~~i~~~~~~~~g~~~~~~~~~-~-~~~~~------p~~i~~d---~~ 228 (296)
T 3e5z_A 168 -IRDR----VKPNGLAFLPSGNLL-VSDT--GDNATHRYCLNARGETEYQGVHF-T-VEPGK------TDGLRVD---AG 228 (296)
T ss_dssp -ECCC----SSEEEEEECTTSCEE-EEET--TTTEEEEEEECSSSCEEEEEEEE-C-CSSSC------CCSEEEB---TT
T ss_pred -ecCC----CCCccEEECCCCCEE-EEeC--CCCeEEEEEECCCCcCcCCCeEe-e-CCCCC------CCeEEEC---CC
Confidence 2222 344678999999966 5554 33467777775 4544 2232 1 11111 1233443 14
Q ss_pred CCEEEEEEEECCeEEEEEEeCCCCceeecccCCcceEee---eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 368 KNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI---TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 368 ~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~v~~~---~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
| .++++. + ..|+++|++++.+..+..+.. +..+ .++++.+++... ..||+++++++++
T Consensus 229 G-~l~v~~--~--~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 229 G-LIWASA--G--DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVRGL 289 (296)
T ss_dssp S-CEEEEE--T--TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSCCBC
T ss_pred C-CEEEEc--C--CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEcccccc
Confidence 4 466655 3 468889998776677766544 4333 345566666543 3799999887764
No 245
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=98.89 E-value=6.8e-09 Score=107.24 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=76.6
Q ss_pred CCCCEEEEecCCCCCccc----------C-cCCHHh---HHHHcCceEEEEECCCCCCC--------CchhHHHhhcc--
Q 006979 493 EKPPLLVKSHGGPTSEAR----------G-ILNLSI---QYWTSRGWAFVDVNYGGSTG--------YGREFRERLLG-- 548 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~----------~-~~~~~~---~~~a~~G~~v~~~d~rGs~~--------~g~~~~~~~~~-- 548 (623)
.+.|+||++||.+..... . .|...+ +.+.++||.|+++|+||.|. .|..-.....+
T Consensus 40 ~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~ 119 (377)
T 3i1i_A 40 ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDE 119 (377)
T ss_dssp TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSB
T ss_pred CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCc
Confidence 345899999998755433 0 133334 56778999999999997632 22211000000
Q ss_pred ---CCccchHHHHHHHHHHHHhCCCCCCCceE-EEEcChHHHHHHHHh-cCCCceeEEEe-cccCCC
Q 006979 549 ---RWGIVDVNDCCSCATFLVGSGKADEKRLC-ITGGSAGGYTTLAAL-AFRDTFKAGAS-LYGVSI 609 (623)
Q Consensus 549 ---~~g~~~~~D~~~~~~~l~~~~~~d~~rv~-i~G~S~GG~~~~~~~-~~~~~f~a~v~-~~g~~d 609 (623)
.+....++|+.+.+..++++ .+.+++. |+||||||.+++.++ .+|++++++|. ..+...
T Consensus 120 ~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (377)
T 3i1i_A 120 YAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQN 184 (377)
T ss_dssp CGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCc
Confidence 12234567777777776654 2346886 999999999999988 89999999999 555443
No 246
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=98.89 E-value=5.3e-09 Score=106.83 Aligned_cols=120 Identities=13% Similarity=0.094 Sum_probs=79.9
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCC-------HHhHHHHcCceEEEEECCCCCCCCchhHHHhh
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-------LSIQYWTSRGWAFVDVNYGGSTGYGREFRERL 546 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~-------~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~ 546 (623)
.++..++.|.+ ..+ |.||++||+.. ....|. ..++.|+++||.|+.+|+||.|..+.......
T Consensus 49 ~~~~~~~~p~~-------~~~-~~vvl~HG~g~--~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~ 118 (328)
T 1qlw_A 49 QMYVRYQIPQR-------AKR-YPITLIHGCCL--TGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAIN 118 (328)
T ss_dssp CEEEEEEEETT-------CCS-SCEEEECCTTC--CGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHH
T ss_pred eEEEEEEccCC-------CCC-ccEEEEeCCCC--CCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccc
Confidence 35666676754 223 56889999853 333444 47889999999999999999776543211100
Q ss_pred ----------------------------cc-CCcc---------chHHH------------------HHHHHHHHHhCCC
Q 006979 547 ----------------------------LG-RWGI---------VDVND------------------CCSCATFLVGSGK 570 (623)
Q Consensus 547 ----------------------------~~-~~g~---------~~~~D------------------~~~~~~~l~~~~~ 570 (623)
.+ .|.. ...++ +.+++..++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-- 196 (328)
T 1qlw_A 119 AVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK-- 196 (328)
T ss_dssp HHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH--
T ss_pred cccccccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH--
Confidence 00 0000 00222 45555555544
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
+ +++.++|||+||.+++.++ .+|++++++|+..|.
T Consensus 197 ~--~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~ 232 (328)
T 1qlw_A 197 L--DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPG 232 (328)
T ss_dssp H--TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCS
T ss_pred h--CCceEEEECcccHHHHHHHHhChhheeEEEEeCCC
Confidence 1 3899999999999999988 789999999999975
No 247
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.89 E-value=4.1e-07 Score=92.33 Aligned_cols=249 Identities=12% Similarity=0.038 Sum_probs=134.3
Q ss_pred EEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 151 RIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 151 ~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
+++++ .+++++..++.|+++|++++ ..+.+... .......+.++|||+.++....+.. ....|+++|++
T Consensus 51 ~~~~~g~l~~~~~~~~~i~~~d~~~~--~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~~-----~~~~i~~~d~~ 120 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNIFKINPETK--EIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDFK-----STGGIFAATEN 120 (333)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTC--CEEEEEEC---SSSSEEEEEECTTSCEEEEECTTSS-----SCCEEEEECTT
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCC--cEEEEeeC---CCCCcceEEECCCCcEEEEeCCCCC-----CCceEEEEeCC
Confidence 34444 67777777788999999877 55554321 0234566889999986554332211 11579999999
Q ss_pred CCCccccee-ccc--CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCc
Q 006979 230 GQNIQEPKV-LVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (623)
Q Consensus 230 ~g~~~~~~~-l~~--~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (623)
++. .+. +.. .........++|||+ |++....... .-....||+++.+++. ...+.... .....+
T Consensus 121 ~~~---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~-~~~~~~l~~~~~~~~~---~~~~~~~~-----~~~~~i 187 (333)
T 2dg1_A 121 GDN---LQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYS-TNPLGGVYYVSPDFRT---VTPIIQNI-----SVANGI 187 (333)
T ss_dssp SCS---CEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBT-TBCCEEEEEECTTSCC---EEEEEEEE-----SSEEEE
T ss_pred CCE---EEEEEccCccCCcccceEECCCCC-EEEEeccccc-cCCCceEEEEeCCCCE---EEEeecCC-----Ccccce
Confidence 887 442 221 123345568999997 5555432100 0014568888876542 22222211 234578
Q ss_pred eeCCCCcEEEEEeCCCCeeeEEEEecCC--CeEEEEeec-ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 307 KWSSKGELFFVTDRKNGFWNLHKWIESN--NEVLAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 307 ~ws~DG~l~~~~~~~~g~~~L~~~d~~~--~~~~~l~~~-~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
.|+|||+.+|+++. ....|+++|+++ .....+... ...+... .....+.+. +++ .+++....+ ..|
T Consensus 188 ~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~---~~~~~i~~d---~~G-~l~v~~~~~--~~v 256 (333)
T 2dg1_A 188 ALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGH---EGPDSCCID---SDD-NLYVAMYGQ--GRV 256 (333)
T ss_dssp EECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSS---SEEEEEEEB---TTC-CEEEEEETT--TEE
T ss_pred EECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCC---CCCCceEEC---CCC-CEEEEEcCC--CEE
Confidence 99999984444443 233678888753 223322110 0000000 011223333 244 466554333 367
Q ss_pred EEEeCCCCceeecccCCc------ceEee--eecCCEEEEEEecC--CCCCeEEEEEcCC
Q 006979 384 GILDDFGHSLSLLDIPFT------DIDNI--TLGNDCLFVEGASG--VEPSSVAKVTLDD 433 (623)
Q Consensus 384 ~~~d~~~~~~~~lt~~~~------~v~~~--~~~~~~~~~~~~s~--~~~~~ly~~~l~~ 433 (623)
+++|.+++..+.+..+.. .+..+ +++++.+++..... .....||++++..
T Consensus 257 ~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 257 LVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred EEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 888987666666654422 22333 55667887766542 3345788888654
No 248
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=98.89 E-value=5.4e-09 Score=103.06 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=72.6
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+.. ...|...+..|++. |.|+++|+||.|.+... .. . ....++..+.+..++++ .+.++
T Consensus 17 ~~vvllHG~~~~--~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~-----~~-~-~~~~~~~~~dl~~~l~~--l~~~~ 84 (269)
T 2xmz_A 17 QVLVFLHGFLSD--SRTYHNHIEKFTDN-YHVITIDLPGHGEDQSS-----MD-E-TWNFDYITTLLDRILDK--YKDKS 84 (269)
T ss_dssp EEEEEECCTTCC--GGGGTTTHHHHHTT-SEEEEECCTTSTTCCCC-----TT-S-CCCHHHHHHHHHHHHGG--GTTSE
T ss_pred CeEEEEcCCCCc--HHHHHHHHHHHhhc-CeEEEecCCCCCCCCCC-----CC-C-ccCHHHHHHHHHHHHHH--cCCCc
Confidence 359999999544 33566677788775 99999999997654331 01 0 22355555555544443 23469
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+.++||||||.+++.++ .+|++++++|...+..
T Consensus 85 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 118 (269)
T 2xmz_A 85 ITLFGYSMGGRVALYYAINGHIPISNLILESTSP 118 (269)
T ss_dssp EEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCS
T ss_pred EEEEEECchHHHHHHHHHhCchheeeeEEEcCCc
Confidence 99999999999999999 8999999999988654
No 249
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.89 E-value=1.6e-07 Score=95.60 Aligned_cols=224 Identities=9% Similarity=-0.037 Sum_probs=126.4
Q ss_pred EEEeC--CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 150 FRIFG--DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 150 ~~~s~--d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
..+++ +.++|++...++|++++++++ ..+.+... .....+.++|+|+.++.. . ..|+++|
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~--~~~~~~~~-----~~v~~i~~~~dg~l~v~~-~----------~gl~~~d 115 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASG--RKTVHALP-----FMGSALAKISDSKQLIAS-D----------DGLFLRD 115 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTT--EEEEEECS-----SCEEEEEEEETTEEEEEE-T----------TEEEEEE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCC--cEEEEECC-----CcceEEEEeCCCeEEEEE-C----------CCEEEEE
Confidence 34454 488998877788999999876 45544432 234567799999866553 2 3499999
Q ss_pred cCCCCcccceecccCC-----CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcccc
Q 006979 228 LNGQNIQEPKVLVSGS-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 302 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~-----~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~ 302 (623)
+++++ .+.+.... .......++|||+ |++....... ......||+++ + + . ...+..+. ..
T Consensus 116 ~~~g~---~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~-~~~~~~l~~~~-~-g-~--~~~~~~~~-----~~ 180 (326)
T 2ghs_A 116 TATGV---LTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKA-ETGAGSIYHVA-K-G-K--VTKLFADI-----SI 180 (326)
T ss_dssp TTTCC---EEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTC-CTTCEEEEEEE-T-T-E--EEEEEEEE-----SS
T ss_pred CCCCc---EEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcC-CCCceEEEEEe-C-C-c--EEEeeCCC-----cc
Confidence 98887 55443221 1234567999998 5554432110 01246799988 3 3 1 22222221 23
Q ss_pred CcCceeCCCCcEEEEEeCCCCeeeEEEEecC--CC-eE---EEEeecccccccccccccCcceeEEeecCCCCEEEEEEE
Q 006979 303 PTEPKWSSKGELFFVTDRKNGFWNLHKWIES--NN-EV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 376 (623)
Q Consensus 303 ~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~--~~-~~---~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~ 376 (623)
...+.|+|||+.+|+.+. ....|+++|.+ ++ +. +.+...... .+.+ +.+.+. .++.+++...
T Consensus 181 ~~~i~~s~dg~~lyv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~----~~~p--~gi~~d----~~G~lwva~~ 248 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGI----KGGM--DGSVCD----AEGHIWNARW 248 (326)
T ss_dssp EEEEEECTTSCEEEEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTS----SSEE--EEEEEC----TTSCEEEEEE
T ss_pred cCCeEEcCCCCEEEEEEC--CCCEEEEEEcccccCCcccCceEEEECCCC----CCCC--CeeEEC----CCCCEEEEEe
Confidence 357899999984444444 23478888875 55 31 222211100 1111 223332 2334555543
Q ss_pred ECCeEEEEEEeCCCCceeecccCCcceEee--e-ecCCEEEEEEecC
Q 006979 377 QNGRSYLGILDDFGHSLSLLDIPFTDIDNI--T-LGNDCLFVEGASG 420 (623)
Q Consensus 377 ~~g~~~L~~~d~~~~~~~~lt~~~~~v~~~--~-~~~~~~~~~~~s~ 420 (623)
.. ..|+++|++++..+.+..+...+..+ + ++++.+++.....
T Consensus 249 ~~--~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 249 GE--GAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp TT--TEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CC--CEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 22 36889999766666666654444444 3 5567777765543
No 250
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.88 E-value=3.6e-07 Score=93.06 Aligned_cols=238 Identities=11% Similarity=-0.025 Sum_probs=139.7
Q ss_pred eEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 149 ~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
...+.++.+++....++.|.++|++++ .....++.. .......++|+| ++++..... ..|+++|+
T Consensus 48 ~i~~~~~~lyv~~~~~~~v~viD~~t~-~~~~~i~~~-----~~p~~i~~~~~g-~lyv~~~~~--------~~v~~iD~ 112 (328)
T 3dsm_A 48 SMVIRDGIGWIVVNNSHVIFAIDINTF-KEVGRITGF-----TSPRYIHFLSDE-KAYVTQIWD--------YRIFIINP 112 (328)
T ss_dssp EEEEETTEEEEEEGGGTEEEEEETTTC-CEEEEEECC-----SSEEEEEEEETT-EEEEEEBSC--------SEEEEEET
T ss_pred EEEEECCEEEEEEcCCCEEEEEECccc-EEEEEcCCC-----CCCcEEEEeCCC-eEEEEECCC--------CeEEEEEC
Confidence 345567788888877788999999987 223455432 223356788898 555443221 67999999
Q ss_pred CCCCcccceecccCC-----CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 229 NGQNIQEPKVLVSGS-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 229 ~~g~~~~~~~l~~~~-----~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
.+++. ...+.-+. .......+ ++++|+...+.. ...|.++|++++. ....+.. . ..+
T Consensus 113 ~t~~~--~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~------~~~v~viD~~t~~---~~~~i~~-g----~~p 174 (328)
T 3dsm_A 113 KTYEI--TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSY------QNRILKIDTETDK---VVDELTI-G----IQP 174 (328)
T ss_dssp TTTEE--EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTT------CCEEEEEETTTTE---EEEEEEC-S----SCB
T ss_pred CCCeE--EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCC------CCEEEEEECCCCe---EEEEEEc-C----CCc
Confidence 98872 12232222 02334456 677787664321 3469999988763 2222222 1 234
Q ss_pred cCceeCCCCcEEEEEeCCCC-------eeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEE
Q 006979 304 TEPKWSSKGELFFVTDRKNG-------FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 376 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g-------~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~ 376 (623)
....+++||++|+......+ ...|+++|+.+++......... +. ....+.+. |+++.+|++..
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~--g~-----~p~~la~~---~d~~~lyv~~~ 244 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL--GD-----WPSEVQLN---GTRDTLYWINN 244 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--TC-----CCEEEEEC---TTSCEEEEESS
T ss_pred cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC--CC-----CceeEEEe---cCCCEEEEEcc
Confidence 57889999987666543100 2579999998887553322110 10 11233443 37787877542
Q ss_pred ECCeEEEEEEeCCCCceee---cccCCcceEee--eecCCEEEEEEe-cCCCCCeEEEEEcCCCc
Q 006979 377 QNGRSYLGILDDFGHSLSL---LDIPFTDIDNI--TLGNDCLFVEGA-SGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 377 ~~g~~~L~~~d~~~~~~~~---lt~~~~~v~~~--~~~~~~~~~~~~-s~~~~~~ly~~~l~~~~ 435 (623)
.++++|.+++++.. ++........+ +++++.+|+... +......|++++.+ ++
T Consensus 245 -----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 245 -----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp -----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred -----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 79999998887632 22111223334 556777777652 22345679999887 54
No 251
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=98.88 E-value=1.2e-08 Score=101.70 Aligned_cols=103 Identities=13% Similarity=0.108 Sum_probs=71.9
Q ss_pred CEEEEecCCC-CCcccCcCCHHh-HHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 496 PLLVKSHGGP-TSEARGILNLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 496 Pliv~~hGg~-~~~~~~~~~~~~-~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
|.||++||.. .......|.... ..|++. |.|+++|+||.|.+.... . .....++..+.+..++++ .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~-----~--~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAG-YRVILLDCPGWGKSDSVV-----N--SGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHTT-CEEEEECCTTSTTSCCCC-----C--SSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhcC-CeEEEEcCCCCCCCCCCC-----c--cccCHHHHHHHHHHHHHH--hCC
Confidence 4899999973 223333555555 667665 999999999976543311 0 123455555555555443 234
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+++.++|||+||.+++.++ .+|++++++|...+..
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 142 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGT 142 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCc
Confidence 7999999999999999988 8999999999887753
No 252
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=98.87 E-value=4.1e-09 Score=112.42 Aligned_cols=114 Identities=12% Similarity=0.081 Sum_probs=74.0
Q ss_pred CCCEEEEecCCCCCcccCc-CCHHhH---HHHcCceEEEEECCCCC--CCCchhHHHhhccC---C----ccchHHHHHH
Q 006979 494 KPPLLVKSHGGPTSEARGI-LNLSIQ---YWTSRGWAFVDVNYGGS--TGYGREFRERLLGR---W----GIVDVNDCCS 560 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~-~~~~~~---~~a~~G~~v~~~d~rGs--~~~g~~~~~~~~~~---~----g~~~~~D~~~ 560 (623)
..|.||++||.+....... |...+. .|+++||.|+++|+||. |..+..-.....+. | .....+|..+
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~ 187 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVR 187 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHH
Confidence 3578999999965444311 444443 56688999999999994 33321100000000 1 1234555555
Q ss_pred HHHHHHhCCCCCCCc-eEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 561 CATFLVGSGKADEKR-LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 561 ~~~~l~~~~~~d~~r-v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.+..+++. ...++ +.++||||||.+++.++ .+|++++++|...+...
T Consensus 188 dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 188 IHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp HHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred HHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecccc
Confidence 55554443 12467 99999999999999998 88999999999988764
No 253
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=98.87 E-value=4.9e-09 Score=104.62 Aligned_cols=103 Identities=14% Similarity=0.106 Sum_probs=71.7
Q ss_pred CEEEEecCC-CCCcccCcCCHHh-HHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 496 PLLVKSHGG-PTSEARGILNLSI-QYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 496 Pliv~~hGg-~~~~~~~~~~~~~-~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
|.||++||. |++.....|...+ ..|+++ |.|+++|+||.|.+... .. .....++..+.+..++++ .+.
T Consensus 34 ~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~-----~~--~~~~~~~~a~dl~~~l~~--l~~ 103 (286)
T 2puj_A 34 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGFNKSDAV-----VM--DEQRGLVNARAVKGLMDA--LDI 103 (286)
T ss_dssp SEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTSTTSCCC-----CC--SSCHHHHHHHHHHHHHHH--TTC
T ss_pred CcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCCCCCCCC-----CC--cCcCHHHHHHHHHHHHHH--hCC
Confidence 579999997 3223333555566 778776 99999999996654321 01 022345554444444433 224
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+++.|+||||||.+++.++ .+|++++++|...+..
T Consensus 104 ~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~ 139 (286)
T 2puj_A 104 DRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGG 139 (286)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred CceEEEEECHHHHHHHHHHHhChHhhheEEEECccc
Confidence 7999999999999999998 8999999999987753
No 254
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=98.87 E-value=4e-09 Score=105.88 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=77.3
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcC--ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 571 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~--G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~ 571 (623)
..|.||++||.+.. ...|...++.|+++ ||.|+.+|+||.|...... ....+|+.+.+..+.+..
T Consensus 35 ~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~---------~~~~~~~~~~l~~~~~~~-- 101 (302)
T 1pja_A 35 SYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL---------WEQVQGFREAVVPIMAKA-- 101 (302)
T ss_dssp CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH---------HHHHHHHHHHHHHHHHHC--
T ss_pred CCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhH---------HHHHHHHHHHHHHHhhcC--
Confidence 44678899998543 34677888999998 9999999999964322211 124667777777776653
Q ss_pred CCCceEEEEcChHHHHHHHHh-cCCC-ceeEEEecccCC
Q 006979 572 DEKRLCITGGSAGGYTTLAAL-AFRD-TFKAGASLYGVS 608 (623)
Q Consensus 572 d~~rv~i~G~S~GG~~~~~~~-~~~~-~f~a~v~~~g~~ 608 (623)
.+++.++|||+||.+++.++ .+|+ +++++|...+..
T Consensus 102 -~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 102 -PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp -TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred -CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 47999999999999999999 8898 799999888754
No 255
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=98.87 E-value=2.3e-09 Score=104.91 Aligned_cols=101 Identities=13% Similarity=0.071 Sum_probs=71.9
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHc-CceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
|.||++||.+.. ...|......|++ +||.|+.+|+||.|....... .--....+|+.+.++++. +.+
T Consensus 22 ~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~l~~~~-----~~~ 89 (272)
T 3fsg_A 22 TPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-----STSDNVLETLIEAIEEII-----GAR 89 (272)
T ss_dssp SEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-----CSHHHHHHHHHHHHHHHH-----TTC
T ss_pred CeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-----CCHHHHHHHHHHHHHHHh-----CCC
Confidence 678999998533 3345555666776 799999999999765433211 011112345555555532 347
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.++|||+||.+++.++ .+|++++++|...|..
T Consensus 90 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 124 (272)
T 3fsg_A 90 RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVI 124 (272)
T ss_dssp CEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECS
T ss_pred cEEEEEeCchHHHHHHHHHhChHhhheeEEECccc
Confidence 999999999999999999 8899999999999875
No 256
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.86 E-value=6.6e-07 Score=89.87 Aligned_cols=237 Identities=11% Similarity=0.117 Sum_probs=138.0
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ ..+++...++.|.++++.++ .....+... ........|+|+|++|+....+ ..|.+
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------~~i~v 91 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGH----KLGISDVAWSSDSNLLVSASDD---------KTLKI 91 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEE
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCc-ccchhhccC----CCceEEEEEcCCCCEEEEECCC---------CEEEE
Confidence 445566655 45556667888999998766 223334332 3346678899999988876554 56888
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+.+++. ...+...........|+|||+.|+....+. .|.++|+..+. ....+.... ..+..
T Consensus 92 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~---~~~~~~~~~----~~v~~ 154 (312)
T 4ery_A 92 WDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKTGK---CLKTLPAHS----DPVSA 154 (312)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTCC---EEEEECCCS----SCEEE
T ss_pred EECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCE---EEEEecCCC----CcEEE
Confidence 89988762 334444445556678999999888665433 38888988763 233344433 45677
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE-EEeec-ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~~~-~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
..|+|||++++.... ++. |..+|..+++.. .+... ...+.. ..+ +|+++.++. ...++. |
T Consensus 155 ~~~~~~~~~l~~~~~-d~~--i~~wd~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~l~~-~~~d~~--i 216 (312)
T 4ery_A 155 VHFNRDGSLIVSSSY-DGL--CRIWDTASGQCLKTLIDDDNPPVSF---------VKF---SPNGKYILA-ATLDNT--L 216 (312)
T ss_dssp EEECTTSSEEEEEET-TSC--EEEEETTTCCEEEEECCSSCCCEEE---------EEE---CTTSSEEEE-EETTTE--E
T ss_pred EEEcCCCCEEEEEeC-CCc--EEEEECCCCceeeEEeccCCCceEE---------EEE---CCCCCEEEE-EcCCCe--E
Confidence 899999995555554 454 556677666533 23221 111111 222 236665554 445564 5
Q ss_pred EEEeCCCCcee-ecccCCcc---e-EeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 384 GILDDFGHSLS-LLDIPFTD---I-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 384 ~~~d~~~~~~~-~lt~~~~~---v-~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.++|+.+++.. .+...... + ..+...++.+++.++. ...|+..++.+++
T Consensus 217 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~---dg~i~vwd~~~~~ 270 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKE 270 (312)
T ss_dssp EEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT---TSCEEEEETTTCC
T ss_pred EEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC---CCEEEEEECCCch
Confidence 55677666543 33322111 1 1223344545544432 2467788877765
No 257
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=98.85 E-value=9.5e-09 Score=102.04 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=68.5
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+... ..|......|+++||.|+++|+||.|.+... ......++..+.+..+++. .+.++
T Consensus 28 ~~vvllHG~~~~~--~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~--------~~~~~~~~~a~dl~~ll~~--l~~~~ 95 (281)
T 3fob_A 28 KPVVLIHGWPLSG--RSWEYQVPALVEAGYRVITYDRRGFGKSSQP--------WEGYEYDTFTSDLHQLLEQ--LELQN 95 (281)
T ss_dssp EEEEEECCTTCCG--GGGTTTHHHHHHTTEEEEEECCTTSTTSCCC--------SSCCSHHHHHHHHHHHHHH--TTCCS
T ss_pred CeEEEECCCCCcH--HHHHHHHHHHHhCCCEEEEeCCCCCCCCCCC--------ccccCHHHHHHHHHHHHHH--cCCCc
Confidence 4578899996443 4566677889999999999999997654331 1112334444333333332 12468
Q ss_pred eEEEEcChHHHHHHHHh-c-CCCceeEEEecccC
Q 006979 576 LCITGGSAGGYTTLAAL-A-FRDTFKAGASLYGV 607 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~-~~~~f~a~v~~~g~ 607 (623)
+.++||||||.+++.++ . +|++++.+|...+.
T Consensus 96 ~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 96 VTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp EEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred EEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 99999999998777655 4 58999999987654
No 258
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=98.85 E-value=1.3e-08 Score=104.27 Aligned_cols=102 Identities=16% Similarity=0.067 Sum_probs=74.4
Q ss_pred CCCEEEEecCCCCCcccCc-CCHHhHHHHcCceEEEEECC----CCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhC
Q 006979 494 KPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNY----GGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS 568 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~-~~~~~~~~a~~G~~v~~~d~----rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~ 568 (623)
..|.||++||.+.+..... +...+..| ++||.|+.+|+ ||.|.+... ...+|+.+.++++.++
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~~-----------~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDHA-----------HDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCHH-----------HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcccc-----------CcHHHHHHHHHHHHHH
Confidence 3578899999754332222 23456666 78999999964 775443211 2367888889988774
Q ss_pred CCCCCCceEEEEcChHHHHHHHHh-c--CCCceeEEEecccCCC
Q 006979 569 GKADEKRLCITGGSAGGYTTLAAL-A--FRDTFKAGASLYGVSI 609 (623)
Q Consensus 569 ~~~d~~rv~i~G~S~GG~~~~~~~-~--~~~~f~a~v~~~g~~d 609 (623)
.+.+++.|+||||||.+++.++ . +|++++++|...|..+
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 3457999999999999999887 3 6899999999888654
No 259
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=98.85 E-value=1.3e-08 Score=100.43 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=73.6
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
..|.||++||.+.. ...|......|++ +|.|+++|+||.|.+... .......++..+.+..+++.- ..
T Consensus 14 ~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l--~~ 81 (268)
T 3v48_A 14 DAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRGTGNNPDT-------LAEDYSIAQMAAELHQALVAA--GI 81 (268)
T ss_dssp TCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTTBTTBCCC-------CCTTCCHHHHHHHHHHHHHHT--TC
T ss_pred CCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCCCCCCCCC-------ccccCCHHHHHHHHHHHHHHc--CC
Confidence 34789999998543 3466677777765 699999999996654221 011234555555555554431 23
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+++.++||||||.+++.++ .+|+++++.|...+..
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~ 117 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWL 117 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEecccc
Confidence 6899999999999999988 8999999999987754
No 260
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=98.85 E-value=1.5e-08 Score=100.53 Aligned_cols=118 Identities=13% Similarity=0.003 Sum_probs=80.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+ .|.||++||.+... ..|...+..|++. |.|+.+|+||.|...... ....
T Consensus 16 ~g~~l~~~~~g~------------~~~vv~lHG~~~~~--~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~----~~~~ 76 (297)
T 2qvb_A 16 AGKRMAYIDEGK------------GDAIVFQHGNPTSS--YLWRNIMPHLEGL-GRLVACDLIGMGASDKLS----PSGP 76 (297)
T ss_dssp TTEEEEEEEESS------------SSEEEEECCTTCCG--GGGTTTGGGGTTS-SEEEEECCTTSTTSCCCS----SCST
T ss_pred CCEEEEEEecCC------------CCeEEEECCCCchH--HHHHHHHHHHhhc-CeEEEEcCCCCCCCCCCC----Cccc
Confidence 687777554421 27899999996433 3466667777664 999999999976543210 0011
Q ss_pred ccchHHHHHHHHHHHHhCCCCCC-CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADE-KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~-~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.....++..+.+..++++ ++. +++.++|||+||.+++.++ .+|++++++|...|...
T Consensus 77 ~~~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 77 DRYSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp TSSCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred cCcCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 113345544444444433 234 7899999999999999998 88999999999998764
No 261
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.85 E-value=5.3e-07 Score=91.87 Aligned_cols=246 Identities=4% Similarity=-0.114 Sum_probs=133.3
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC----EEEEEeC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD----TVIFSNY 162 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d----~l~f~~~ 162 (623)
...+..+.|+| +..+........++|...+|..... +...+.. .-+...+.+..++++ .++++..
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~---~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG---DLKLLRE-------IEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS---SEEEEEE-------EEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC---cccceee-------ecccCcEEEEEEcCCCCCCceEEEec
Confidence 45667889998 6566555433223466666765432 2211110 012222344555554 5666766
Q ss_pred CCCcEEEEeCCCCCCCceecCCCCCCCCeeecce------eeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccc
Q 006979 163 KDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADG------IFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEP 236 (623)
Q Consensus 163 ~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~------~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~ 236 (623)
.++.|.++|+.++......+... ....... .|+|+++.|+....+ ..|.++|+.++.. ..
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~s~~~~~l~~~~~d---------~~i~vwd~~~~~~-~~ 153 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGH----KEIINAIDGIGGLGIGEGAPEIVTGSRD---------GTVKVWDPRQKDD-PV 153 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCC----SSCEEEEEEESGGGCC-CCCEEEEEETT---------SCEEEECTTSCSS-CS
T ss_pred CCCeEEEEeCCCCCccEEEEEec----ccceEEEeeccccccCCCccEEEEEeCC---------CeEEEEeCCCCCC-cc
Confidence 78889999998761123444432 1223333 578999988776554 4588889887641 02
Q ss_pred eecccCCC----ccc----ceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 237 KVLVSGSD----FYA----FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 237 ~~l~~~~~----~~~----~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
..+..... ... .+.|+|||+.|+.... ...|.++|+..+. ........ ..+..+.|
T Consensus 154 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~~----~~~~~~~~----~~v~~~~~ 217 (357)
T 3i2n_A 154 ANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD--------NGDIKLFDLRNMA----LRWETNIK----NGVCSLEF 217 (357)
T ss_dssp EEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET--------TSEEEEEETTTTE----EEEEEECS----SCEEEEEE
T ss_pred eeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc--------CCeEEEEECccCc----eeeecCCC----CceEEEEc
Confidence 33322111 222 2348999998887652 2358999998762 22223333 45678899
Q ss_pred CC---CCcEEEEEeCCCCeeeEEEEecCCCeEE-EEe-----ecccccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 309 SS---KGELFFVTDRKNGFWNLHKWIESNNEVL-AIY-----SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 309 s~---DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~-----~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
+| ++++++.... +|.-.+ +|..+++.. .+. .....+.. +.+. |+++.++++...+|
T Consensus 218 ~~~~~~~~~l~~~~~-dg~i~i--~d~~~~~~~~~~~~~~~~~~~~~v~~---------~~~~---~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 218 DRKDISMNKLVATSL-EGKFHV--FDMRTQHPTKGFASVSEKAHKSTVWQ---------VRHL---PQNRELFLTAGGAG 282 (357)
T ss_dssp SCSSSSCCEEEEEES-TTEEEE--EEEEEEETTTEEEEEEEECCSSCEEE---------EEEE---TTEEEEEEEEETTS
T ss_pred CCCCCCCCEEEEECC-CCeEEE--EeCcCCCcccceeeeccCCCcCCEEE---------EEEC---CCCCcEEEEEeCCC
Confidence 99 8885555554 455444 444333211 111 11122222 2333 26665777777788
Q ss_pred eEEEEEEeC
Q 006979 380 RSYLGILDD 388 (623)
Q Consensus 380 ~~~L~~~d~ 388 (623)
.-+||.++.
T Consensus 283 ~i~iwd~~~ 291 (357)
T 3i2n_A 283 GLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEC
T ss_pred cEEEeecCC
Confidence 877777764
No 262
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=98.84 E-value=1.9e-08 Score=102.09 Aligned_cols=99 Identities=15% Similarity=0.083 Sum_probs=72.5
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC-C
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE-K 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~-~ 574 (623)
|.||++||.+... ..|...+..|++. |.|+++|+||.|.+... ..+...+++..+.+..++++ .+. +
T Consensus 44 ~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~GhG~S~~~-------~~~~~~~~~~a~dl~~ll~~--l~~~~ 111 (318)
T 2psd_A 44 NAVIFLHGNATSS--YLWRHVVPHIEPV-ARCIIPDLIGMGKSGKS-------GNGSYRLLDHYKYLTAWFEL--LNLPK 111 (318)
T ss_dssp SEEEEECCTTCCG--GGGTTTGGGTTTT-SEEEEECCTTSTTCCCC-------TTSCCSHHHHHHHHHHHHTT--SCCCS
T ss_pred CeEEEECCCCCcH--HHHHHHHHHhhhc-CeEEEEeCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHh--cCCCC
Confidence 6799999985433 3566667777665 69999999997654332 11223466666666666655 233 7
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEeccc
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYG 606 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g 606 (623)
++.|+||||||.+++.++ .+|++++++|...+
T Consensus 112 ~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 112 KIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp SEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred CeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 999999999999999998 89999999998653
No 263
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.84 E-value=2.2e-06 Score=89.53 Aligned_cols=238 Identities=8% Similarity=-0.013 Sum_probs=137.0
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ ..+++...++.|.++|+.++ ...+.+... ........| +++.++....+ ..|.+
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~d---------g~i~i 200 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQ-TKLRTMAGH----QARVGCLSW--NRHVLSSGSRS---------GAIHH 200 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCC----SSCEEEEEE--ETTEEEEEETT---------SEEEE
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCC-eEEEEecCC----CCceEEEEE--CCCEEEEEcCC---------CCEEE
Confidence 445666655 45555557888999999876 233444432 334556667 45666655443 56889
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+..... ....+......+....|+|||++|+....+. .|.++|+..+. ....+.+.. ..+..
T Consensus 201 ~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~---~~~~~~~~~----~~v~~ 264 (401)
T 4aez_A 201 HDVRIANH-QIGTLQGHSSEVCGLAWRSDGLQLASGGNDN--------VVQIWDARSSI---PKFTKTNHN----AAVKA 264 (401)
T ss_dssp EETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTCSS---EEEEECCCS----SCCCE
T ss_pred EecccCcc-eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC--------eEEEccCCCCC---ccEEecCCc----ceEEE
Confidence 99874321 0233444444566788999999888776432 38888988763 233344444 56788
Q ss_pred ceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEE-ECCeEEE
Q 006979 306 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSYL 383 (623)
Q Consensus 306 ~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~-~~g~~~L 383 (623)
+.|+|+|. ++..... .....|..+|..+++..........+....|++ +++.++.+.. .+|.-++
T Consensus 265 ~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~------------~~~~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 265 VAWCPWQSNLLATGGG-TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSP------------HSKEIMSTHGFPDNNLSI 331 (401)
T ss_dssp EEECTTSTTEEEEECC-TTTCEEEEEETTTCCEEEEEECSSCEEEEEECS------------SSSEEEEEECTTTCEEEE
T ss_pred EEECCCCCCEEEEecC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECC------------CCCeEEEEeecCCCcEEE
Confidence 99999988 6665531 123457777887776544443333333334432 6666665532 4565555
Q ss_pred EEEeCCCCceee---cccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 384 GILDDFGHSLSL---LDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 384 ~~~d~~~~~~~~---lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
|.+ .+++... +......+..+ ++++..++. ++. ...|...++.+++
T Consensus 332 ~~~--~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s-~~~---dg~i~iw~~~~~~ 382 (401)
T 4aez_A 332 WSY--SSSGLTKQVDIPAHDTRVLYSALSPDGRILST-AAS---DENLKFWRVYDGD 382 (401)
T ss_dssp EEE--ETTEEEEEEEEECCSSCCCEEEECTTSSEEEE-ECT---TSEEEEEECCC--
T ss_pred Eec--CCccceeEEEecCCCCCEEEEEECCCCCEEEE-EeC---CCcEEEEECCCCc
Confidence 544 4444332 22333334444 566665543 322 2467788887765
No 264
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.84 E-value=1.8e-07 Score=97.92 Aligned_cols=203 Identities=10% Similarity=0.011 Sum_probs=119.6
Q ss_pred CceEEEeC-C-EEEEEeCCCCcEEEEeCCCCCC------CceecCCCCCCCCeeecceeeCCCCC-EEEEEEeccCCCCC
Q 006979 147 GGAFRIFG-D-TVIFSNYKDQRLYKHSIDSKDS------SPLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDRRQDAL 217 (623)
Q Consensus 147 ~~~~~~s~-d-~l~f~~~~~~~l~~~d~~~g~~------~~~~Lt~~~~~~~~~~~d~~~sPdG~-~l~~v~~~~~~~~~ 217 (623)
+.+..+++ + .++++...++.|.++++.++.. ....+... ........|+|+|+ .|+....+
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~~d------ 153 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----TKRVGIVAWHPTAQNVLLSAGCD------ 153 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----SSCEEEEEECSSBTTEEEEEETT------
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----CCeEEEEEECcCCCCEEEEEcCC------
Confidence 45666665 3 5677777788899999886510 12223322 34466788999985 55444333
Q ss_pred CceeEEEEEEcCCCCcccceec--ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE-cC
Q 006979 218 NSTTEIVAIALNGQNIQEPKVL--VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AG 294 (623)
Q Consensus 218 ~~~~~L~~idl~~g~~~~~~~l--~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~-~~ 294 (623)
..|.++|+.+++. ...+ ....+.+....|+|||+.|+....+ ..|.++|+..+. ....+ ..
T Consensus 154 ---g~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~---~~~~~~~~ 217 (402)
T 2aq5_A 154 ---NVILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKGT---VVAEKDRP 217 (402)
T ss_dssp ---SCEEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTTE---EEEEEECS
T ss_pred ---CEEEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCCc---eeeeeccC
Confidence 4588899988762 3344 3334456678899999988877633 358999988762 23333 33
Q ss_pred CCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeE-EEEe--ecccccccccccccCcceeEEeecCCCCEE
Q 006979 295 FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV-LAIY--SLDAEFSRPLWVFGINSYEIIQSHGEKNLI 371 (623)
Q Consensus 295 ~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~-~~l~--~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l 371 (623)
.. . ..+....|+|||++++..........|..+|..+++. ..+. .....+.... +. ++++.+
T Consensus 218 ~~-~--~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~---------~s---~~~~~l 282 (402)
T 2aq5_A 218 HE-G--TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF---------FD---PDTNIV 282 (402)
T ss_dssp SC-S--SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE---------EE---TTTTEE
T ss_pred CC-C--CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE---------Ec---CCCCEE
Confidence 32 1 2367889999998555542112345677778766542 1111 1111222222 22 377877
Q ss_pred EEEEEECCeEEEEEEeCCCCc
Q 006979 372 ACSYRQNGRSYLGILDDFGHS 392 (623)
Q Consensus 372 ~~~~~~~g~~~L~~~d~~~~~ 392 (623)
+++...+|.-++|-+ .+++
T Consensus 283 ~~~g~~dg~i~i~d~--~~~~ 301 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEI--TSEA 301 (402)
T ss_dssp EEEETTCSCEEEEEE--CSST
T ss_pred EEEEcCCCeEEEEEe--cCCC
Confidence 777655666555544 4444
No 265
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=98.84 E-value=4.6e-09 Score=103.82 Aligned_cols=102 Identities=14% Similarity=0.029 Sum_probs=68.7
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCc-cchHHHHHHHHHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWG-IVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g-~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
|.||++||.+. ....|...+..|++ +|.|+++|+||.|.+...-.+. ...+. ....+|+.+.++.+ +.+
T Consensus 21 ~~vvllHG~~~--~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~-~~~~~~~~~a~dl~~~l~~l------~~~ 90 (271)
T 1wom_A 21 ASIMFAPGFGC--DQSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDL-NRYQTLDGYAQDVLDVCEAL------DLK 90 (271)
T ss_dssp SEEEEECCTTC--CGGGGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCT-TGGGSHHHHHHHHHHHHHHT------TCS
T ss_pred CcEEEEcCCCC--chhhHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccc-cccccHHHHHHHHHHHHHHc------CCC
Confidence 78999999843 33456666777766 6999999999977653210000 00000 01134444444433 246
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
++.++||||||.+++.++ .+|++++++|...+.
T Consensus 91 ~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~ 124 (271)
T 1wom_A 91 ETVFVGHSVGALIGMLASIRRPELFSHLVMVGPS 124 (271)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCC
Confidence 899999999999999988 899999999988764
No 266
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=98.83 E-value=1.7e-08 Score=101.11 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=71.8
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+.. ...|...+..|+++ |.|+++|.||.|.+... . . ........++..+.+..++++ ...++
T Consensus 30 ~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~--~-~~~~~~~~~~~a~dl~~ll~~--l~~~~ 100 (294)
T 1ehy_A 30 PTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-D--L-NDLSKYSLDKAADDQAALLDA--LGIEK 100 (294)
T ss_dssp SEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTTSTTSCCC-C--T-TCGGGGCHHHHHHHHHHHHHH--TTCCC
T ss_pred CEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCCCCCCCCC-c--c-ccccCcCHHHHHHHHHHHHHH--cCCCC
Confidence 579999999643 34667778888876 99999999997665431 0 0 000012344444444444433 12368
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEeccc
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYG 606 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g 606 (623)
+.++|||+||.+++.++ .+|++++++|...+
T Consensus 101 ~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 132 (294)
T 1ehy_A 101 AYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132 (294)
T ss_dssp EEEEEETHHHHHHHHHHHHTGGGEEEEEEECC
T ss_pred EEEEEeChhHHHHHHHHHhChhheeEEEEecC
Confidence 99999999999999988 89999999999885
No 267
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.82 E-value=4.1e-07 Score=89.50 Aligned_cols=235 Identities=11% Similarity=0.022 Sum_probs=138.0
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCC--CCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPD--YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~--~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~ 233 (623)
.|+|++. +.|++++++++ ..+.+... ...+..+...+.|+|+++.|+++.... ..|++++++++.
T Consensus 3 ~l~~~~~--~~I~~~~~~g~--~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~--------~~I~~~~~~g~~- 69 (267)
T 1npe_A 3 HLLFAQT--GKIERLPLERN--TMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE--------PSIGRASLHGGE- 69 (267)
T ss_dssp EEEEEEE--EEEEEEEESSS--CBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTT--------TEEEEEESSSCC-
T ss_pred EEEEEcC--CeEEEEEecCc--ccccccceeeecCCCCcEEEEEEecCCCEEEEEECCC--------CEEEEEecCCCC-
Confidence 3667653 46999999865 33221100 000123445788999988888765422 679999998875
Q ss_pred ccceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCC
Q 006979 234 QEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (623)
Q Consensus 234 ~~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG 312 (623)
.+.+. .+........++|++++|++.... ...|+++++++.. ...+..... ..+....++|++
T Consensus 70 --~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~---~~~~~~~~~----~~P~~i~vd~~~ 133 (267)
T 1npe_A 70 --PTTIIRQDLGSPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQ---RRVLFDTGL----VNPRGIVTDPVR 133 (267)
T ss_dssp --CEEEECTTCCCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCS---CEEEECSSC----SSEEEEEEETTT
T ss_pred --cEEEEECCCCCccEEEEEecCCeEEEEECC-------CCEEEEEEcCCCC---EEEEEECCC----CCccEEEEeeCC
Confidence 44443 222334456799999989887632 3468999987652 222332221 234577899976
Q ss_pred cEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCc
Q 006979 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (623)
Q Consensus 313 ~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~ 392 (623)
..+|+++.......|+++++++...+.+... .+.. ...+.+. ++++.||++.. +...|+++|++++.
T Consensus 134 g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~--~~~~------P~gia~d---~~~~~lyv~d~--~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMDGTNRRILAQD--NLGL------PNGLTFD---AFSSQLCWVDA--GTHRAECLNPAQPG 200 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETTSCCCEEEECT--TCSC------EEEEEEE---TTTTEEEEEET--TTTEEEEEETTEEE
T ss_pred CEEEEEECCCCCcEEEEEecCCCCcEEEEEC--CCCC------CcEEEEc---CCCCEEEEEEC--CCCEEEEEecCCCc
Confidence 5444455422346788888876554444322 1111 1234443 26788888764 44578999998765
Q ss_pred eeecccCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 393 LSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 393 ~~~lt~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.+.+......-..+..+++.+|+.... ...|++++.++++
T Consensus 201 ~~~~~~~~~~P~gi~~d~~~lyva~~~---~~~v~~~d~~~g~ 240 (267)
T 1npe_A 201 RRKVLEGLQYPFAVTSYGKNLYYTDWK---TNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEECCCSEEEEEEETTEEEEEETT---TTEEEEEETTTTE
T ss_pred eEEEecCCCCceEEEEeCCEEEEEECC---CCeEEEEeCCCCC
Confidence 544332222223445567777775432 2478999988775
No 268
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.82 E-value=1.2e-06 Score=95.77 Aligned_cols=251 Identities=9% Similarity=0.009 Sum_probs=137.7
Q ss_pred eEEEeC----C--EEEEEeCCCCcEEEEeCCCCCCCceecCCCC---C----CCCeeecceeeCCCCCEEEEEEeccCCC
Q 006979 149 AFRIFG----D--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDY---G----EPLVSYADGIFDPRFNRYVTVREDRRQD 215 (623)
Q Consensus 149 ~~~~s~----d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~---~----~~~~~~~d~~~sPdG~~l~~v~~~~~~~ 215 (623)
.+++++ | .++..+..++.|.++|..++ ...+.+.... + .+..+.....+||+++++++.....
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~-~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~--- 301 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL-EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET--- 301 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT---
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC---
Confidence 445555 4 56666656788999998876 2223332210 0 0112455678999998877654322
Q ss_pred CCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEc-C
Q 006979 216 ALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-G 294 (623)
Q Consensus 216 ~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~-~ 294 (623)
+.|+++|..+++...+..+. ...+.....|||||++|+..... ...|.++|+.++. ....+. +
T Consensus 302 -----g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~-------~~~v~v~D~~tg~---l~~~i~~g 365 (543)
T 1nir_A 302 -----GKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANN-------SNKVAVIDSKDRR---LSALVDVG 365 (543)
T ss_dssp -----TEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGG-------GTEEEEEETTTTE---EEEEEECS
T ss_pred -----CeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecC-------CCeEEEEECCCCe---EEEeeccC
Confidence 67999999876421112232 23455567899999988655422 2358889988763 222222 2
Q ss_pred CCCCccccCcCcee-CCCCc-EEEEEeCCCCeeeEEEEecCC-------CeE-EEEeecccccccccccccCcceeEEee
Q 006979 295 FDPTIVESPTEPKW-SSKGE-LFFVTDRKNGFWNLHKWIESN-------NEV-LAIYSLDAEFSRPLWVFGINSYEIIQS 364 (623)
Q Consensus 295 ~~~~~~~~~~~~~w-s~DG~-l~~~~~~~~g~~~L~~~d~~~-------~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~ 364 (623)
..+ .......| +||+. ++..... +...|.++|.++ .+. +.+.... ...+ .+. .
T Consensus 366 ~~p---h~g~g~~~~~p~~g~~~~s~~~--~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g----~~~~-----~v~---~ 428 (543)
T 1nir_A 366 KTP---HPGRGANFVHPKYGPVWSTSHL--GDGSISLIGTDPKNHPQYAWKKVAELQGQG----GGSL-----FIK---T 428 (543)
T ss_dssp SSB---CCTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCC-----CEE---C
T ss_pred CCC---CCCCCcccCCCCCccEEEeccC--CCceEEEEEeCCCCCchhcCeEEEEEEcCC----CCce-----EEE---c
Confidence 110 11122334 57755 5444333 333466666655 332 2332111 0000 112 2
Q ss_pred cCCCCEEEEEEE--EC--CeEEEEEEeCCCCcee--ecc--------cCCcceEe--eeecCCEEEEEEecC-CCCCeEE
Q 006979 365 HGEKNLIACSYR--QN--GRSYLGILDDFGHSLS--LLD--------IPFTDIDN--ITLGNDCLFVEGASG-VEPSSVA 427 (623)
Q Consensus 365 s~~~~~l~~~~~--~~--g~~~L~~~d~~~~~~~--~lt--------~~~~~v~~--~~~~~~~~~~~~~s~-~~~~~ly 427 (623)
+|+++.||.... .+ ....|.++|.++++.. .|. .+...+.. ++++++++++..-+. .....|.
T Consensus 429 ~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~ 508 (543)
T 1nir_A 429 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALV 508 (543)
T ss_dssp CTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEE
T ss_pred CCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEE
Confidence 348888776542 11 1346888898876643 331 21122333 388999999876433 4467899
Q ss_pred EEEcCCCcc
Q 006979 428 KVTLDDHKL 436 (623)
Q Consensus 428 ~~~l~~~~~ 436 (623)
++|.+++++
T Consensus 509 v~D~~t~~~ 517 (543)
T 1nir_A 509 VVDDKTLKL 517 (543)
T ss_dssp EEETTTTEE
T ss_pred EEECCCceE
Confidence 999988874
No 269
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=98.82 E-value=2.1e-08 Score=100.05 Aligned_cols=118 Identities=11% Similarity=0.015 Sum_probs=81.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++...+.+ .|.||++||.+... ..|...+..|+++ |.|+.+|+||.|...... ....
T Consensus 17 ~g~~l~~~~~g~------------~~~vv~lHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~----~~~~ 77 (302)
T 1mj5_A 17 KGRRMAYIDEGT------------GDPILFQHGNPTSS--YLWRNIMPHCAGL-GRLIACDLIGMGDSDKLD----PSGP 77 (302)
T ss_dssp TTEEEEEEEESC------------SSEEEEECCTTCCG--GGGTTTGGGGTTS-SEEEEECCTTSTTSCCCS----SCST
T ss_pred CCEEEEEEEcCC------------CCEEEEECCCCCch--hhhHHHHHHhccC-CeEEEEcCCCCCCCCCCC----CCCc
Confidence 687777544421 37899999995433 3566667777765 799999999976543210 0011
Q ss_pred ccchHHHHHHHHHHHHhCCCCCC-CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADE-KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~-~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.....+|..+.+..++++ ++. +++.++|||+||.+++.++ .+|++++++|..+|...
T Consensus 78 ~~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 136 (302)
T 1mj5_A 78 ERYAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAM 136 (302)
T ss_dssp TSSCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCS
T ss_pred ccccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCC
Confidence 123455555555554443 234 7999999999999999998 88999999999988763
No 270
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=98.81 E-value=2.7e-09 Score=100.48 Aligned_cols=93 Identities=14% Similarity=0.016 Sum_probs=62.8
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcC--ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~--G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
|+||++||...+..........+++.++ ||.|++||++|. |++ ..+.++.++++ .++
T Consensus 3 ptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~---g~~----------------~~~~l~~~~~~--~~~ 61 (202)
T 4fle_A 3 STLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPY---PAE----------------AAEMLESIVMD--KAG 61 (202)
T ss_dssp CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSS---HHH----------------HHHHHHHHHHH--HTT
T ss_pred cEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCC---HHH----------------HHHHHHHHHHh--cCC
Confidence 8999999963332222223456667665 599999999984 332 22233333332 235
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
++|+|+|+|+||++++.++ .+++...+++...+..+
T Consensus 62 ~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~ 98 (202)
T 4fle_A 62 QSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFE 98 (202)
T ss_dssp SCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHH
T ss_pred CcEEEEEEChhhHHHHHHHHHhcccchheeeccchHH
Confidence 7999999999999999999 78888777766655443
No 271
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=98.81 E-value=3.4e-08 Score=103.17 Aligned_cols=118 Identities=15% Similarity=0.039 Sum_probs=86.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcC---------ceEEEEECCCCCCCCchh
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSR---------GWAFVDVNYGGSTGYGRE 541 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~---------G~~v~~~d~rGs~~~g~~ 541 (623)
+|..|+.....+.+ +..|.||++||.+.+. ..|...+..|++. ||.|+++|+||.|.+...
T Consensus 76 ~g~~i~~~~~~~~~--------~~~~plll~HG~~~s~--~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~ 145 (388)
T 4i19_A 76 DGATIHFLHVRSPE--------PDATPMVITHGWPGTP--VEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPL 145 (388)
T ss_dssp TTEEEEEEEECCSS--------TTCEEEEEECCTTCCG--GGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCC
T ss_pred CCeEEEEEEccCCC--------CCCCeEEEECCCCCCH--HHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 78999976665543 2346789999996543 3566778888886 999999999995543221
Q ss_pred HHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 542 FRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 542 ~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
.. .....+++.+.+..+.++ ...+++.++|||+||.+++.++ .+|+.++++|...|.
T Consensus 146 -----~~--~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 146 -----KS--AGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp -----SS--CCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred -----CC--CCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 11 123456666666665544 2346899999999999999999 899999999998864
No 272
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.81 E-value=1.1e-09 Score=120.00 Aligned_cols=128 Identities=20% Similarity=0.229 Sum_probs=83.9
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cCCHHhHHHHcC-ceEEEEECCCCCC-CCchhHHHhhccCC
Q 006979 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSR-GWAFVDVNYGGST-GYGREFRERLLGRW 550 (623)
Q Consensus 474 ~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~~~~~~~~a~~-G~~v~~~d~rGs~-~~g~~~~~~~~~~~ 550 (623)
.++..+|.|...... ..+++.|+||++|||....... .+. ...|+++ |++|+.+|||-.. ||...- .....
T Consensus 111 cL~l~v~~P~~~~~~-~~~~~~Pv~v~iHGGg~~~g~~~~~~--~~~la~~~~~vvv~~~YRl~~~Gfl~~~---~~~~~ 184 (574)
T 3bix_A 111 CLYLNIYVPTEDDIR-DSGGPKPVMVYIHGGSYMEGTGNLYD--GSVLASYGNVIVITVNYRLGVLGFLSTG---DQAAK 184 (574)
T ss_dssp CCEEEEEEEC---------CCEEEEEECCCSSSSSCCGGGSC--CHHHHHHHTCEEEEECCCCHHHHHCCCS---SSSCC
T ss_pred CCEEEEEECCCCCcC-CCCCCCcEEEEECCCcccCCCCCccC--chhhhccCCEEEEEeCCcCcccccCcCC---CCCCC
Confidence 466677888652100 0135689999999996543322 232 2456765 6999999999421 111000 00112
Q ss_pred ccchHHHHHHHHHHHHhCC---CCCCCceEEEEcChHHHHHHHHh-cC--C-CceeEEEecccC
Q 006979 551 GIVDVNDCCSCATFLVGSG---KADEKRLCITGGSAGGYTTLAAL-AF--R-DTFKAGASLYGV 607 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~---~~d~~rv~i~G~S~GG~~~~~~~-~~--~-~~f~a~v~~~g~ 607 (623)
+...+.|+.+|++|+.++- -.||+||.|+|.|+||.+++.++ .. . .+|+.+|+.+|.
T Consensus 185 ~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 185 GNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 3345899999999998852 27999999999999999999887 33 2 689999998863
No 273
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=98.80 E-value=2.3e-08 Score=100.19 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=69.6
Q ss_pred CEEEEecCCC-CCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHh-CCCCCC
Q 006979 496 PLLVKSHGGP-TSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVG-SGKADE 573 (623)
Q Consensus 496 Pliv~~hGg~-~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d~ 573 (623)
|.||++||.. .......|...+..|++. |.|+++|+||.|.+. . .. .....++..+.+..+++ .+ + .
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~-----~~--~~~~~~~~~~dl~~~l~~l~-~-~ 105 (296)
T 1j1i_A 37 QPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKTA-K-----PD--IEYTQDRRIRHLHDFIKAMN-F-D 105 (296)
T ss_dssp SEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTSTTSC-C-----CS--SCCCHHHHHHHHHHHHHHSC-C-S
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCCCCC-C-----CC--CCCCHHHHHHHHHHHHHhcC-C-C
Confidence 5789999973 223334455667777765 999999999966543 1 00 11234444444433333 22 2 2
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
+++.++||||||.+++.++ .+|++++++|...+..
T Consensus 106 ~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 141 (296)
T 1j1i_A 106 GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAG 141 (296)
T ss_dssp SCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCB
T ss_pred CCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCC
Confidence 6899999999999999988 8999999999887754
No 274
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=98.80 E-value=1.7e-08 Score=98.70 Aligned_cols=96 Identities=17% Similarity=0.085 Sum_probs=69.0
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~ 573 (623)
.|.||++||.+.. ...|...+..|+++ |.|+++|+||.|.+... ..+.. ...+|+.+.++.+ + .
T Consensus 16 ~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~------~~~~~~~~a~dl~~~l~~l---~---~ 80 (255)
T 3bf7_A 16 NSPIVLVHGLFGS--LDNLGVLARDLVND-HNIIQVDVRNHGLSPRE------PVMNYPAMAQDLVDTLDAL---Q---I 80 (255)
T ss_dssp CCCEEEECCTTCC--TTTTHHHHHHHTTT-SCEEEECCTTSTTSCCC------SCCCHHHHHHHHHHHHHHH---T---C
T ss_pred CCCEEEEcCCccc--HhHHHHHHHHHHhh-CcEEEecCCCCCCCCCC------CCcCHHHHHHHHHHHHHHc---C---C
Confidence 3568999998543 34677777888776 99999999997654331 01111 1235555555554 2 3
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecc
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLY 605 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~ 605 (623)
+++.++||||||.+++.++ .+|++++++|...
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 113 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEc
Confidence 6899999999999999988 8999999998864
No 275
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=98.79 E-value=3.9e-09 Score=107.49 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=91.5
Q ss_pred CcEEEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHc------CceEEEEECCC
Q 006979 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS------RGWAFVDVNYG 533 (623)
Q Consensus 460 ~~~~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~------~G~~v~~~d~r 533 (623)
+.+.+++.+..-|.....++|.|.+ |+++ .+++|+|+++||.. .. .......+.++. .+++|+.+++.
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~--y~~~-~~~yPVlylldG~~--~f-~~~~~~~~~l~~~~~~~~~~~IvV~i~~~ 84 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEG--YAQS-LEAYPVVYLLDGED--QF-DHMASLLQFLSQGTMPQIPKVIIVGIHNT 84 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTT--GGGS-CCCEEEEEESSHHH--HH-HHHHHHHHHHTCSSSCSSCCCEEEEECCS
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCC--CCCC-CCCccEEEEecChh--hh-HHHHHHHHHHHhhhhcCCCCEEEEEECCC
Confidence 4566777775357889999999988 6542 57899999999962 11 111123344433 36899998762
Q ss_pred CCCCCchhHHHh--------------hccCCccchHHHHH--HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC
Q 006979 534 GSTGYGREFRER--------------LLGRWGIVDVNDCC--SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD 596 (623)
Q Consensus 534 Gs~~~g~~~~~~--------------~~~~~g~~~~~D~~--~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~ 596 (623)
. ..++|... .....+...+.+.+ .++.++.++..+++.| +|+|+||||++++.++ ++|+
T Consensus 85 ~---R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~ 160 (331)
T 3gff_A 85 N---RMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRP 160 (331)
T ss_dssp S---HHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCS
T ss_pred C---cccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCch
Confidence 1 11111100 00011222334433 5667777776677766 7999999999999999 8999
Q ss_pred ceeEEEecccCCC
Q 006979 597 TFKAGASLYGVSI 609 (623)
Q Consensus 597 ~f~a~v~~~g~~d 609 (623)
+|+++++.+|...
T Consensus 161 ~F~~~~~~S~~~w 173 (331)
T 3gff_A 161 LFSAYLALDTSLW 173 (331)
T ss_dssp SCSEEEEESCCTT
T ss_pred hhheeeEeCchhc
Confidence 9999999999764
No 276
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=98.79 E-value=1.6e-08 Score=102.50 Aligned_cols=114 Identities=12% Similarity=0.024 Sum_probs=78.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+|..++....-+ + +.|.||++||.+... ..|...+..|+++ |.|+++|+||.|.+... ..
T Consensus 15 ~g~~l~y~~~G~---------g-~~~pvvllHG~~~~~--~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-----~~-- 74 (316)
T 3afi_E 15 LGSSMAYRETGA---------Q-DAPVVLFLHGNPTSS--HIWRNILPLVSPV-AHCIAPDLIGFGQSGKP-----DI-- 74 (316)
T ss_dssp TTEEEEEEEESC---------T-TSCEEEEECCTTCCG--GGGTTTHHHHTTT-SEEEEECCTTSTTSCCC-----SS--
T ss_pred CCEEEEEEEeCC---------C-CCCeEEEECCCCCch--HHHHHHHHHHhhC-CEEEEECCCCCCCCCCC-----CC--
Confidence 577777544321 1 124799999996543 3566677778765 99999999997655321 11
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
....++..+.+..++++ .+.+++.|+|||+||.+++.++ .+|++++++|...+.
T Consensus 75 -~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 129 (316)
T 3afi_E 75 -AYRFFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFI 129 (316)
T ss_dssp -CCCHHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEEC
T ss_pred -CCCHHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccC
Confidence 22345555544444443 1236999999999999999999 899999999988753
No 277
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.78 E-value=1.1e-06 Score=88.21 Aligned_cols=239 Identities=8% Similarity=-0.002 Sum_probs=138.2
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ ..+++...++.|.++|+.++ ...+.+... ........|+|++++|+....+ ..|.+
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~s~s~d---------~~i~v 81 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQ-VEVRSIQVT----ETPVRAGKFIARKNWIIVGSDD---------FRIRV 81 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECC----SSCEEEEEEEGGGTEEEEEETT---------SEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCC-ceeEEeecc----CCcEEEEEEeCCCCEEEEECCC---------CEEEE
Confidence 445666666 56666667888999999876 223344332 2335567899999988776554 56888
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+.+++. +..+....+.+...+|+||+++|+-...|. .|.+.|+..+.. ....+.+.. ..+..
T Consensus 82 wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~--------~v~lWd~~~~~~--~~~~~~~h~----~~v~~ 145 (304)
T 2ynn_A 82 FNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWENNWA--LEQTFEGHE----HFVMC 145 (304)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEGGGTTE--EEEEECCCC----SCEEE
T ss_pred EECCCCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECCCC--------eEEEEECCCCcc--hhhhhcccC----CcEEE
Confidence 99988762 334444455666788999999887665443 278888876532 233455544 56678
Q ss_pred ceeCC-CCcEEEEEeCCCCeeeEEEEecCCCeE-EEEeec-ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEE
Q 006979 306 PKWSS-KGELFFVTDRKNGFWNLHKWIESNNEV-LAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 382 (623)
Q Consensus 306 ~~ws~-DG~l~~~~~~~~g~~~L~~~d~~~~~~-~~l~~~-~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~ 382 (623)
..|+| |+.+++.... ++.-+ .+|+..+.. ..+... ...+....|.+ . .++.++++...++.-+
T Consensus 146 v~~~p~~~~~l~sgs~-D~~v~--iwd~~~~~~~~~~~~~~~~~v~~~~~~~-------~----~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCL-DRTVK--VWSLGQSTPNFTLTTGQERGVNYVDYYP-------L----PDKPYMITASDDLTIK 211 (304)
T ss_dssp EEECTTCTTEEEEEET-TSEEE--EEETTCSSCSEEEECCCTTCEEEEEECC-------S----TTCCEEEEEETTSEEE
T ss_pred EEECCCCCCEEEEEeC-CCeEE--EEECCCCCccceeccCCcCcEEEEEEEE-------c----CCCCEEEEEcCCCeEE
Confidence 89999 4555555554 45544 455544432 222211 11111111111 1 2334555666677655
Q ss_pred EEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 383 LGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 383 L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
| +|+.+++. ..+......+..+ ++++.. ++.++.. ..|...++.+++
T Consensus 212 i--Wd~~~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~D---g~i~iWd~~~~~ 261 (304)
T 2ynn_A 212 I--WDYQTKSCVATLEGHMSNVSFAVFHPTLPI-IISGSED---GTLKIWNSSTYK 261 (304)
T ss_dssp E--EETTTTEEEEEEECCSSCEEEEEECSSSSE-EEEEETT---SCEEEEETTTCC
T ss_pred E--EeCCCCccceeeCCCCCCEEEEEECCCCCE-EEEEcCC---CeEEEEECCCCc
Confidence 5 47666653 3444444445444 555553 4444332 346677777665
No 278
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=98.78 E-value=1.2e-08 Score=101.25 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=69.9
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
|.||++||.+. ....|...+..|++ +|.|+++|+||.|.+... ...+.. ...+|+.+.++.| +.+
T Consensus 28 p~vvllHG~~~--~~~~w~~~~~~L~~-~~rvia~DlrGhG~S~~~-----~~~~~~~~~a~dl~~ll~~l------~~~ 93 (276)
T 2wj6_A 28 PAILLLPGWCH--DHRVYKYLIQELDA-DFRVIVPNWRGHGLSPSE-----VPDFGYQEQVKDALEILDQL------GVE 93 (276)
T ss_dssp CEEEEECCTTC--CGGGGHHHHHHHTT-TSCEEEECCTTCSSSCCC-----CCCCCHHHHHHHHHHHHHHH------TCC
T ss_pred CeEEEECCCCC--cHHHHHHHHHHHhc-CCEEEEeCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHh------CCC
Confidence 67999999854 33456677777764 699999999996654321 111211 1234555555554 236
Q ss_pred ceEEEEcChHHHHHHHHh-cC-CCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AF-RDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~-~~~f~a~v~~~g~ 607 (623)
++.++||||||.+++.++ .+ |+++++.|...+.
T Consensus 94 ~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~ 128 (276)
T 2wj6_A 94 TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWL 128 (276)
T ss_dssp SEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCC
T ss_pred ceEEEEECHHHHHHHHHHHHhCHHhhceEEEeccc
Confidence 899999999999999999 88 9999999988653
No 279
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.78 E-value=1.4e-06 Score=89.93 Aligned_cols=257 Identities=11% Similarity=0.045 Sum_probs=137.1
Q ss_pred CEEEEEeCC----CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEecc-CCCCCCceeEEEEEEcC
Q 006979 155 DTVIFSNYK----DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVAIALN 229 (623)
Q Consensus 155 d~l~f~~~~----~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~-~~~~~~~~~~L~~idl~ 229 (623)
..+|+.+.. ++.|+++|.+++ .....+..+ .. ..+.+||||++++....-. ........+.+.++|..
T Consensus 45 ~~vyV~~~~~~~~~~~V~ViD~~t~-~v~~~I~vG----~~--P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 45 RRVYVNDPAHFAAVTQQFVIDGEAG-RVIGMIDGG----FL--PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp TEEEEEECGGGCSSEEEEEEETTTT-EEEEEEEEC----SS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CEEEEEcCcccCCCCEEEEEECCCC-eEEEEEECC----CC--CcEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 367777654 567999999876 223344433 11 1378999999887654210 00000012679999999
Q ss_pred CCCcccceecccC--C-----CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE------------
Q 006979 230 GQNIQEPKVLVSG--S-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV------------ 290 (623)
Q Consensus 230 ~g~~~~~~~l~~~--~-----~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~------------ 290 (623)
+.+. ...+.-+ . .......+||||++|+...... ...|.++|+.++..+....
T Consensus 118 t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~------~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~ 189 (386)
T 3sjl_D 118 TLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP------APAVGVVDLEGKAFKRMLDVPDCYHIFPTAP 189 (386)
T ss_dssp TCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS------SCEEEEEETTTTEEEEEEECCSEEEEEEEET
T ss_pred CCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC------CCeEEEEECCCCcEEEEEECCCcceeecCCC
Confidence 9873 2233211 1 1234467999999987664221 2235555554432100000
Q ss_pred --------------EEcCC------------CCCccccCcCceeC-CCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeec
Q 006979 291 --------------CVAGF------------DPTIVESPTEPKWS-SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSL 343 (623)
Q Consensus 291 --------------~~~~~------------~~~~~~~~~~~~ws-~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~ 343 (623)
+..+. +.+-......+.|. +||+++|++.. | +++.+|..++..+.+.+-
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~--g--~V~v~d~~~~~~~v~~~~ 265 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYT--G--KIHQIDLSSGDAKFLPAV 265 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTT--S--EEEEEECTTSSCEECCCE
T ss_pred ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCC--C--EEEEEECCCCcceeecce
Confidence 00000 00000011224553 67777776653 3 578888766654333211
Q ss_pred c---cccccccccccC-cceeEEeecCCCCEEEEEEEEC-------CeEEEEEEeCCCCcee-ecccCCcceEe--eeec
Q 006979 344 D---AEFSRPLWVFGI-NSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSLS-LLDIPFTDIDN--ITLG 409 (623)
Q Consensus 344 ~---~~~~~~~w~~~~-~~~~~l~~s~~~~~l~~~~~~~-------g~~~L~~~d~~~~~~~-~lt~~~~~v~~--~~~~ 409 (623)
. .....+.|.++. ..+.+ +++++.+|+....+ ...+|+.+|+.++++. .+..+.. ..+ ++.+
T Consensus 266 ~~~~~~~~~~g~~p~g~q~~a~---~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~-~~~lavs~D 341 (386)
T 3sjl_D 266 EALTEAERADGWRPGGWQQVAY---HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE-IDSINVSQD 341 (386)
T ss_dssp ESSCHHHHHTTEEECSSSCEEE---ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-ECEEEECSS
T ss_pred eccccccccccccCCCcceeeE---CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC-cceEEECCC
Confidence 1 001123455533 23344 34888899887543 3578999999988764 5554432 223 3777
Q ss_pred CCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 410 NDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 410 ~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
++..+|+... ....|..+|..+++.
T Consensus 342 ~~~~ly~tn~--~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 342 EKPLLYALST--GDKTLYIHDAESGEE 366 (386)
T ss_dssp SSCEEEEEET--TTTEEEEEETTTCCE
T ss_pred CCeEEEEEcC--CCCeEEEEECCCCcE
Confidence 7644454432 245789999988763
No 280
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.78 E-value=1.5e-07 Score=97.18 Aligned_cols=206 Identities=10% Similarity=-0.005 Sum_probs=116.7
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ ..+++...++.|.++|+.++ .....+... ........|+|+++.++++.... ..|.+
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~-~~~~~~~~h----~~~v~~v~~s~~~~~~~~s~~~d--------g~v~~ 208 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQK-AVLKSYNAH----SSEVNCVAACPGKDTIFLSCGED--------GRILL 208 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTT-EEEEEECCC----SSCEEEEEECTTCSSCEEEEETT--------SCEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCC----CCCEEEEEEccCCCceeeeeccC--------CceEE
Confidence 445666666 55666667888999999876 223334332 23456678999987554443322 45788
Q ss_pred EEcCCCCcccceecc--cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 226 IALNGQNIQEPKVLV--SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 226 idl~~g~~~~~~~l~--~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
+|+.+++. ...+. ..........|+||+..++.....+ ..|.++|+..+. ....+.+.. ..+
T Consensus 209 wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-------~~i~~wd~~~~~---~~~~~~~~~----~~v 272 (357)
T 4g56_B 209 WDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDET-------GNVSLVNIKNPD---SAQTSAVHS----QNI 272 (357)
T ss_dssp CCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-------SCEEEEESSCGG---GCEEECCCS----SCE
T ss_pred EECCCCce--eeeeeeccccccccchhhhhcccceEEEeecc-------cceeEEECCCCc---EeEEEeccc----eeE
Confidence 89887752 12221 2223345678999976554444222 238888987663 334445444 456
Q ss_pred cCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEE
Q 006979 304 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 382 (623)
Q Consensus 304 ~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~ 382 (623)
....|+|||+ ++..... ++ .|..+|..+++..........+....|+ |.++.++++...+|.-.
T Consensus 273 ~~l~~sp~~~~~lasgs~-D~--~i~iwd~~~~~~~~~~~H~~~V~~vafs------------P~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISE-DC--TVAVLDADFSEVFRDLSHRDFVTGVAWS------------PLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEEECSSSSCCEEEEET-TS--CEEEECTTSCEEEEECCCSSCEEEEEEC------------SSSTTEEEEEETTSCEE
T ss_pred EEEEEcCCCCCEEEEEeC-CC--EEEEEECCCCcEeEECCCCCCEEEEEEe------------CCCCCEEEEEcCCCeEE
Confidence 7889999986 5554443 34 4556688787655443322233333333 23444566666788877
Q ss_pred EEEEeCCCCceeec
Q 006979 383 LGILDDFGHSLSLL 396 (623)
Q Consensus 383 L~~~d~~~~~~~~l 396 (623)
+|.++..+.....+
T Consensus 338 iW~~~~~~~~~~~i 351 (357)
T 4g56_B 338 HHHLPSEGRTENLI 351 (357)
T ss_dssp EEECC---------
T ss_pred EEECCCCCcccccc
Confidence 77665444433333
No 281
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.78 E-value=1.3e-06 Score=95.41 Aligned_cols=248 Identities=8% Similarity=0.005 Sum_probs=139.5
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeC--CCCCCCceecCCCCCCCCeeecceeeCC----CCCEEEEEEeccCCCCCCcee
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSI--DSKDSSPLPITPDYGEPLVSYADGIFDP----RFNRYVTVREDRRQDALNSTT 221 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~--~~g~~~~~~Lt~~~~~~~~~~~d~~~sP----dG~~l~~v~~~~~~~~~~~~~ 221 (623)
..++++| +.+|+...++.|.++|+ .++ .....+..+ .......+|| ||++++...+.. .
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~-~~~~~i~~g-----~~p~~va~sp~~~~dg~~l~v~~~~~--------~ 248 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEP-TKVAEIKIG-----IEARSVESSKFKGYEDRYTIAGAYWP--------P 248 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSC-EEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEES--------S
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCC-cEEEEEecC-----CCcceEEeCCCcCCCCCEEEEEEccC--------C
Confidence 3445655 44455445688999999 555 223344432 2335678999 999987766532 5
Q ss_pred EEEEEEcCCCCcccceeccc-C----------CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE
Q 006979 222 EIVAIALNGQNIQEPKVLVS-G----------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV 290 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~-~----------~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~ 290 (623)
.+.++|..+++. ++.+.. + ........+|||++.+++.. .+ ...|+++|+.+...+....
T Consensus 249 ~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~~------~g~i~vvd~~~~~~l~~~~ 319 (543)
T 1nir_A 249 QFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-KE------TGKVLLVNYKDIDNLTVTS 319 (543)
T ss_dssp EEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-TT------TTEEEEEECTTSSSCEEEE
T ss_pred eEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEEE-CC------CCeEEEEEecCCCcceeEE
Confidence 688899988762 222321 1 11234567999999876554 32 3469999998764322112
Q ss_pred EEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCE
Q 006979 291 CVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNL 370 (623)
Q Consensus 291 ~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~ 370 (623)
+. .. ..+....|+|||+.++++.. +...|..+|..+++.....+... ...+.+ ...+. +|+++.
T Consensus 320 -i~-~~----~~~~~~~~spdg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~-~ph~g~-----g~~~~--~p~~g~ 383 (543)
T 1nir_A 320 -IG-AA----PFLHDGGWDSSHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGK-TPHPGR-----GANFV--HPKYGP 383 (543)
T ss_dssp -EE-CC----SSCCCEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSS-SBCCTT-----CEEEE--ETTTEE
T ss_pred -ec-cC----cCccCceECCCCCEEEEEec--CCCeEEEEECCCCeEEEeeccCC-CCCCCC-----CcccC--CCCCcc
Confidence 22 12 34568899999995555554 23357779999987655443210 001100 11111 125566
Q ss_pred EEEEEEECCeEEEEEEeCCC-------C-ceeecccCCcceEe--eeecCCEEEEEEe-cCC--CCCeEEEEEcCCCcc
Q 006979 371 IACSYRQNGRSYLGILDDFG-------H-SLSLLDIPFTDIDN--ITLGNDCLFVEGA-SGV--EPSSVAKVTLDDHKL 436 (623)
Q Consensus 371 l~~~~~~~g~~~L~~~d~~~-------~-~~~~lt~~~~~v~~--~~~~~~~~~~~~~-s~~--~~~~ly~~~l~~~~~ 436 (623)
++++.. .+...|.++|.++ . .++.|..+...... ++++++++++... ++. ....|.++|+++++.
T Consensus 384 ~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 384 VWSTSH-LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEEecc-CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 665543 2333466667665 2 23455543222222 3777777775432 111 134799999988763
No 282
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=98.78 E-value=2.8e-08 Score=104.83 Aligned_cols=143 Identities=13% Similarity=0.095 Sum_probs=94.5
Q ss_pred CcEEEEeecC-CCCeE--EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc--Cc----------------CC-HHh
Q 006979 460 LPELIEFPTE-VPGQK--AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR--GI----------------LN-LSI 517 (623)
Q Consensus 460 ~~~~i~~~~~-~dg~~--i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~--~~----------------~~-~~~ 517 (623)
...+|.|.+. .+|.. +.+.++.|.+. ..+.|+|.+.||....... +. +. ...
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~------~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~ 147 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKP------ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPII 147 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSC------CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCC------CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHH
Confidence 5567777775 24544 67789999873 2347999999997532211 10 11 245
Q ss_pred HHH-HcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-
Q 006979 518 QYW-TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF- 594 (623)
Q Consensus 518 ~~~-a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~- 594 (623)
+.| +++||+|+++||+|.|. .|..... ....+.|.++++..+. +.-...|++++|||+||..+++++ .+
T Consensus 148 ~~~~l~~G~~Vv~~Dy~G~G~---~y~~~~~---~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~ 219 (462)
T 3guu_A 148 IGWALQQGYYVVSSDHEGFKA---AFIAGYE---EGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAE 219 (462)
T ss_dssp HHHHHHTTCEEEEECTTTTTT---CTTCHHH---HHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEecCCCCCC---cccCCcc---hhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhCh
Confidence 667 89999999999999664 2221110 0112344444444443 322347999999999999999887 33
Q ss_pred ---CC-ceeEEEecccCCCHHHhhhh
Q 006979 595 ---RD-TFKAGASLYGVSIPVIISEE 616 (623)
Q Consensus 595 ---~~-~f~a~v~~~g~~d~~~~~~~ 616 (623)
|+ .++++++..++.|+......
T Consensus 220 ~yapel~~~g~~~~~~p~dl~~~~~~ 245 (462)
T 3guu_A 220 SYAPELNIVGASHGGTPVSAKDTFTF 245 (462)
T ss_dssp HHCTTSEEEEEEEESCCCBHHHHHHH
T ss_pred hhcCccceEEEEEecCCCCHHHHHHH
Confidence 33 69999999999999887653
No 283
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=6.2e-07 Score=88.20 Aligned_cols=203 Identities=11% Similarity=0.083 Sum_probs=125.1
Q ss_pred eEEEeC--CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 149 AFRIFG--DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 149 ~~~~s~--d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
..++++ +.|++++...+.|++++++++ ..+.+... .........++|+++.|+++.... ..|+++
T Consensus 40 gi~~d~~~~~ly~~d~~~~~I~~~~~~g~--~~~~~~~~---~~~~p~~ia~d~~~~~lyv~d~~~--------~~I~~~ 106 (267)
T 1npe_A 40 GLAFDCVDKVVYWTDISEPSIGRASLHGG--EPTTIIRQ---DLGSPEGIALDHLGRTIFWTDSQL--------DRIEVA 106 (267)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEESSSC--CCEEEECT---TCCCEEEEEEETTTTEEEEEETTT--------TEEEEE
T ss_pred EEEEecCCCEEEEEECCCCEEEEEecCCC--CcEEEEEC---CCCCccEEEEEecCCeEEEEECCC--------CEEEEE
Confidence 345553 489999888888999999865 44433321 012345677999888887765422 579999
Q ss_pred EcCCCCcccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 227 ALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 227 dl~~g~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
++++.. .+.+.. +.......+++|++.+|+|..+.. ....|+++++++.. ...+....- ..+..
T Consensus 107 ~~~g~~---~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~---~~~~~~~~~----~~P~g 171 (267)
T 1npe_A 107 KMDGTQ---RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTN---RRILAQDNL----GLPNG 171 (267)
T ss_dssp ETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCC---CEEEECTTC----SCEEE
T ss_pred EcCCCC---EEEEEECCCCCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCC---cEEEEECCC----CCCcE
Confidence 998765 344432 223344567999989999886432 13568999887652 222222211 34567
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~ 385 (623)
+++++|++.+|+++. +...|+++|+++...+.+... ...| ..+.+ +++.+|++.. +...|++
T Consensus 172 ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~---~~~P------~gi~~-----d~~~lyva~~--~~~~v~~ 233 (267)
T 1npe_A 172 LTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEG---LQYP------FAVTS-----YGKNLYYTDW--KTNSVIA 233 (267)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEEC---CCSE------EEEEE-----ETTEEEEEET--TTTEEEE
T ss_pred EEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecC---CCCc------eEEEE-----eCCEEEEEEC--CCCeEEE
Confidence 899998875556665 445799999876554444321 1111 12222 6678888653 3346889
Q ss_pred EeCCCCce-eecc
Q 006979 386 LDDFGHSL-SLLD 397 (623)
Q Consensus 386 ~d~~~~~~-~~lt 397 (623)
+|.++++. +.+.
T Consensus 234 ~d~~~g~~~~~i~ 246 (267)
T 1npe_A 234 MDLAISKEMDTFH 246 (267)
T ss_dssp EETTTTEEEEEEC
T ss_pred EeCCCCCceEEEc
Confidence 99887654 4443
No 284
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=98.78 E-value=1.3e-08 Score=103.63 Aligned_cols=100 Identities=15% Similarity=0.056 Sum_probs=69.4
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++||.+... ..|...+.. .||.|+++|+||.|..... .......++..+.+..+++. .+.++
T Consensus 82 ~~vv~~hG~~~~~--~~~~~~~~~---lg~~Vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~ 147 (330)
T 3p2m_A 82 PRVIFLHGGGQNA--HTWDTVIVG---LGEPALAVDLPGHGHSAWR-------EDGNYSPQLNSETLAPVLRE--LAPGA 147 (330)
T ss_dssp CSEEEECCTTCCG--GGGHHHHHH---SCCCEEEECCTTSTTSCCC-------SSCBCCHHHHHHHHHHHHHH--SSTTC
T ss_pred CeEEEECCCCCcc--chHHHHHHH---cCCeEEEEcCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHH--hCCCC
Confidence 6799999985433 234444433 4999999999997654321 11223344555444444443 23579
Q ss_pred eEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
+.++|||+||++++.++ .+|++++++|...|...
T Consensus 148 v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 182 (330)
T 3p2m_A 148 EFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPS 182 (330)
T ss_dssp CEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHH
T ss_pred cEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCc
Confidence 99999999999999998 89999999999987644
No 285
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.77 E-value=3.6e-08 Score=99.92 Aligned_cols=119 Identities=13% Similarity=-0.018 Sum_probs=82.7
Q ss_pred CeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCC-HHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCC
Q 006979 472 GQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRW 550 (623)
Q Consensus 472 g~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~-~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~ 550 (623)
+..+...++.|.. +. .+..+.||++||....... .|. ...+.|+++||.|+.+|+||.+....
T Consensus 13 ~~~l~~~i~~p~~--~~---~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~---------- 76 (317)
T 1tca_A 13 KSVLDAGLTCQGA--SP---SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLNDT---------- 76 (317)
T ss_dssp HHHHHHTEEETTB--CT---TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSCH----------
T ss_pred HHHHhheeeCCCC--CC---CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCcH----------
Confidence 3345555666654 21 2234568899998543221 255 67888999999999999998542111
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCC---CceeEEEecccCCC
Q 006979 551 GIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFR---DTFKAGASLYGVSI 609 (623)
Q Consensus 551 g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~---~~f~a~v~~~g~~d 609 (623)
....+++.+.++++.++- ..++|.++|||+||.+++.++ .++ +.++++|.++|..+
T Consensus 77 -~~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 77 -QVNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp -HHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred -HHHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 112467788888887652 237999999999999999887 554 78999999988653
No 286
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.77 E-value=2.4e-06 Score=89.40 Aligned_cols=157 Identities=13% Similarity=0.068 Sum_probs=100.0
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ .++++...++.|.++|+.++ .....+... ........|+|+|+.|+....+ ..|.+
T Consensus 142 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------~~v~i 207 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQDMQLKIWSVKDG-SNPRTLIGH----RATVTDIAIIDRGRNVLSASLD---------GTIRL 207 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTC-CCCEEEECC----SSCEEEEEEETTTTEEEEEETT---------SCEEE
T ss_pred cEEEEECCCCCEEEEEeCCCeEEEEeCCCC-cCceEEcCC----CCcEEEEEEcCCCCEEEEEcCC---------CcEEE
Confidence 445666655 46666667888999999876 344555432 3456678899999988876554 34777
Q ss_pred EEcCCCCcccceecccC------------------------CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEec
Q 006979 226 IALNGQNIQEPKVLVSG------------------------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS 281 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~------------------------~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~ 281 (623)
+|+.+++. ...+... ........|||||++|+....+. .|.++|+.
T Consensus 208 wd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~i~i~d~~ 277 (420)
T 3vl1_A 208 WECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG--------VITVHNVF 277 (420)
T ss_dssp EETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS--------CEEEEETT
T ss_pred eECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC--------eEEEEECC
Confidence 88877652 2222210 12234467999999887665332 38888988
Q ss_pred CCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCe
Q 006979 282 ENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNE 336 (623)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~ 336 (623)
.+.. ...+..+.. ..+..+.|+|+|+ +++.... +|. |..+|..+++
T Consensus 278 ~~~~--~~~~~~~~~----~~v~~~~~~~~~~~~l~~g~~-dg~--i~vwd~~~~~ 324 (420)
T 3vl1_A 278 SKEQ--TIQLPSKFT----CSCNSLTVDGNNANYIYAGYE-NGM--LAQWDLRSPE 324 (420)
T ss_dssp TCCE--EEEECCTTS----SCEEEEEECSSCTTEEEEEET-TSE--EEEEETTCTT
T ss_pred CCce--eEEcccccC----CCceeEEEeCCCCCEEEEEeC-CCe--EEEEEcCCCc
Confidence 7632 122222222 4567899999998 7777665 454 5566776653
No 287
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.77 E-value=3.9e-06 Score=87.60 Aligned_cols=242 Identities=9% Similarity=0.081 Sum_probs=134.7
Q ss_pred eEEEeCCEEEE--EeCCCCcEEEEeCCCCCC---CceecCCCCCCCCeeecceeeCC-CCCEEEEEEeccCCCCCCceeE
Q 006979 149 AFRIFGDTVIF--SNYKDQRLYKHSIDSKDS---SPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 149 ~~~~s~d~l~f--~~~~~~~l~~~d~~~g~~---~~~~Lt~~~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~~~~~~~~ 222 (623)
....+++.+.+ ....++.|.++++...+. ....+... .....+..|+| +++.|+....+ ..
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~s~d---------g~ 105 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGH----TAPVLDIAWCPHNDNVIASGSED---------CT 105 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCC----SSCEEEEEECTTCTTEEEEEETT---------SE
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecC----CCCEEEEEeCCCCCCEEEEEeCC---------Ce
Confidence 35556664433 345677899999864201 11112211 34567889999 88877766543 56
Q ss_pred EEEEEcCCCCc-----ccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE--cCC
Q 006979 223 IVAIALNGQNI-----QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV--AGF 295 (623)
Q Consensus 223 L~~idl~~g~~-----~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~--~~~ 295 (623)
|.++|+.++.. .....+......+....|+|||+.+++....+ ..|.++|+..+. ....+ .+.
T Consensus 106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-------g~i~iwd~~~~~---~~~~~~~~~~ 175 (402)
T 2aq5_A 106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-------NVILVWDVGTGA---AVLTLGPDVH 175 (402)
T ss_dssp EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-------SCEEEEETTTTE---EEEEECTTTC
T ss_pred EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-------CEEEEEECCCCC---ccEEEecCCC
Confidence 88888877631 11334444445566788999995344443222 238888988762 33344 333
Q ss_pred CCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEe-eccc--ccccccccccCcceeEEeecCCCCEEE
Q 006979 296 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDA--EFSRPLWVFGINSYEIIQSHGEKNLIA 372 (623)
Q Consensus 296 ~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~-~~~~--~~~~~~w~~~~~~~~~l~~s~~~~~l~ 372 (623)
. ..+....|+|||++++.... ++ .|..+|+.+++..... .... .+.. ..+. ++++.++
T Consensus 176 ~----~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~l~ 236 (402)
T 2aq5_A 176 P----DTIYSVDWSRDGALICTSCR-DK--RVRVIEPRKGTVVAEKDRPHEGTRPVH---------AVFV---SEGKILT 236 (402)
T ss_dssp C----SCEEEEEECTTSSCEEEEET-TS--EEEEEETTTTEEEEEEECSSCSSSCCE---------EEEC---STTEEEE
T ss_pred C----CceEEEEECCCCCEEEEEec-CC--cEEEEeCCCCceeeeeccCCCCCcceE---------EEEc---CCCcEEE
Confidence 3 46778999999994444443 34 4667788777644332 2111 1222 2333 2554444
Q ss_pred EEEEECCeEEEEEEeCCCCce--eeccc-CCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 373 CSYRQNGRSYLGILDDFGHSL--SLLDI-PFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 373 ~~~~~~g~~~L~~~d~~~~~~--~~lt~-~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
..........|.++|+.+++. ..... ....+..+ +++++.+++.+... ..|..+++.+++
T Consensus 237 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d---g~i~i~d~~~~~ 301 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD---SSIRYFEITSEA 301 (402)
T ss_dssp EEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---SCEEEEEECSST
T ss_pred EeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---CeEEEEEecCCC
Confidence 332223445677788876543 22221 12223333 77777776665322 367777877766
No 288
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.76 E-value=3.4e-07 Score=94.00 Aligned_cols=243 Identities=8% Similarity=-0.017 Sum_probs=138.6
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcEE
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l~ 168 (623)
.+..+.|+|++.+. .-. ++|...||....+ +........ ..-|.-.+.+.+++++ ..+++...++.|.
T Consensus 84 ~v~~~~~s~d~~l~-~~s---~dg~v~lWd~~~~---~~~~~~~~~----~~~H~~~V~~v~~spdg~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 84 GVADLTWVGERGIL-VAS---DSGAVELWELDEN---ETLIVSKFC----KYEHDDIVSTVSVLSSGTQAVSGSKDICIK 152 (344)
T ss_dssp CEEEEEEETTTEEE-EEE---TTSEEEEEEECTT---SSCEEEEEE----EECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CEEEEEEeCCCeEE-EEE---CCCEEEEEeccCC---CceeEeecc----ccCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 35678888644433 322 3577777766433 221111000 0012222456666666 5666777788899
Q ss_pred EEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccC--CCcc
Q 006979 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSG--SDFY 246 (623)
Q Consensus 169 ~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~--~~~~ 246 (623)
++|+.++ .....+... ........|+|+++.++++.... ..|.+.|+.+++. ...+... ....
T Consensus 153 iwd~~~~-~~~~~~~~h----~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~--~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 153 VWDLAQQ-VVLSSYRAH----AAQVTCVAASPHKDSVFLSCSED--------NRILLWDTRCPKP--ASQIGCSAPGYLP 217 (344)
T ss_dssp EEETTTT-EEEEEECCC----SSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTSSSC--EEECC----CCCE
T ss_pred EEECCCC-cEEEEEcCc----CCceEEEEecCCCCCceeeeccc--------cccccccccccce--eeeeecceeeccc
Confidence 9999876 223334322 33456788999997665544322 4588889988762 3334221 2234
Q ss_pred cceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCee
Q 006979 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFW 325 (623)
Q Consensus 247 ~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~ 325 (623)
....|+|++..++..... ...|.++|+..+. ....+.+.. ..+....|+|||. +++.... ++.
T Consensus 218 ~~~~~~p~~~~~l~sg~~-------dg~v~~wd~~~~~---~~~~~~~h~----~~v~~v~fsp~g~~~lasgs~-D~~- 281 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDE-------NGTVSLVDTKSTS---CVLSSAVHS----QCVTGLVFSPHSVPFLASLSE-DCS- 281 (344)
T ss_dssp EEEEECSSCTTEEEEEET-------TSEEEEEESCC-----CCEEEECCS----SCEEEEEECSSSSCCEEEEET-TSC-
T ss_pred eeeeecCCCCcceEEecc-------CCcEEEEECCCCc---EEEEEcCCC----CCEEEEEEccCCCeEEEEEeC-CCe-
Confidence 457899976655444322 2348888988763 334455554 4567889999986 5554443 344
Q ss_pred eEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 326 NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 326 ~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
|..+|..+++...+......+....|+ |+++.++.+...++.-.+|.++
T Consensus 282 -i~vwd~~~~~~~~~~~H~~~V~~v~~s------------p~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 282 -LAVLDSSLSELFRSQAHRDFVRDATWS------------PLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp -EEEECTTCCEEEEECCCSSCEEEEEEC------------SSSTTEEEEEETTSCEEEEECC
T ss_pred -EEEEECCCCcEEEEcCCCCCEEEEEEe------------CCCCeEEEEEcCCCeEEEEECC
Confidence 556688787655443332233333333 3777788777778877776554
No 289
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.75 E-value=3.8e-06 Score=88.04 Aligned_cols=257 Identities=8% Similarity=-0.032 Sum_probs=135.9
Q ss_pred CEEEEEeCCC----CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEecc-CCCCCCceeEEEEEEcC
Q 006979 155 DTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVAIALN 229 (623)
Q Consensus 155 d~l~f~~~~~----~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~-~~~~~~~~~~L~~idl~ 229 (623)
..+|+.+... +.|.++|++++ .....+..+ ..- .+.+||||++++...... ........+.|.++|+.
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~-~vv~~I~vG-----~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTG-RILGMTDGG-----FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTT-EEEEEEEEC-----SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CEEEEECCCcCCCCCeEEEEECCCC-EEEEEEECC-----CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 3566666544 67999999876 233444433 112 588999999887765310 00000012679999999
Q ss_pred CCCcccceecc-c-CC-----CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcC-------C
Q 006979 230 GQNIQEPKVLV-S-GS-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-------F 295 (623)
Q Consensus 230 ~g~~~~~~~l~-~-~~-----~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~-------~ 295 (623)
+++. ...+. . .. ....+..+||||++|+...... ...|.++|+.+...+.... +.+ .
T Consensus 158 t~~v--v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~------~~~VsVID~~t~kvv~~I~-v~g~~~~~p~g 228 (426)
T 3c75_H 158 TFLP--IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP------APAVGVVDLEGKTFDRMLD-VPDCYHIFPAS 228 (426)
T ss_dssp TCCE--EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS------SCEEEEEETTTTEEEEEEE-CCSEEEEEEEE
T ss_pred CCcE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC------CCeEEEEECCCCeEEEEEE-cCCceeeccCC
Confidence 8873 23332 1 11 2234567999999987764321 3458888877653211100 000 0
Q ss_pred ---------C---------CCcc-------------ccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeec
Q 006979 296 ---------D---------PTIV-------------ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSL 343 (623)
Q Consensus 296 ---------~---------~~~~-------------~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~ 343 (623)
+ .... .....+.+++||+ ++|.+.. + .++.+|..++....+.+.
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~--g--~V~ViD~~~~~~~v~~~~ 304 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT--G--KIFQADLTAEGATFRAPI 304 (426)
T ss_dssp TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT--S--EEEEEEECSSCEEECCCE
T ss_pred CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC--C--cEEEEeccCCceEEeeee
Confidence 0 0000 0001234466666 4444332 2 577777766554433211
Q ss_pred cc---ccccccccccC-cceeEEeecCCCCEEEEEEEEC-------CeEEEEEEeCCCCce-eecccCCcc-eEeeeecC
Q 006979 344 DA---EFSRPLWVFGI-NSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSL-SLLDIPFTD-IDNITLGN 410 (623)
Q Consensus 344 ~~---~~~~~~w~~~~-~~~~~l~~s~~~~~l~~~~~~~-------g~~~L~~~d~~~~~~-~~lt~~~~~-v~~~~~~~ 410 (623)
.. ......|.+.. ..+.+. ++++++|++.... +...|.++|..+.++ ..+..+... --.+++++
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s---~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg 381 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYH---RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDA 381 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEE---GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSS
T ss_pred eeccccccccccccCCceeeEEc---CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCC
Confidence 00 00111233321 223443 3888888876532 356899999988765 455544311 11337788
Q ss_pred CEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 411 DCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 411 ~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+..+|+... ....|.++|+++++.
T Consensus 382 ~~~lyv~n~--~s~~VsVID~~t~kv 405 (426)
T 3c75_H 382 EPLLYALSA--GTQTLHIYDAATGEE 405 (426)
T ss_dssp SCEEEEEET--TTTEEEEEETTTCCE
T ss_pred CEEEEEEcC--CCCeEEEEECCCCCE
Confidence 734444432 136799999988874
No 290
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.74 E-value=7.4e-06 Score=84.51 Aligned_cols=244 Identities=8% Similarity=-0.027 Sum_probs=125.2
Q ss_pred CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCC-CCCCceeEEEEEEcCCCCcccceecccC
Q 006979 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVAIALNGQNIQEPKVLVSG 242 (623)
Q Consensus 164 ~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~-~~~~~~~~L~~idl~~g~~~~~~~l~~~ 242 (623)
++.|+++|.+++ .....+..+ ..- .+.+||||++++...+.... ........|.++|+++++. ...+.-.
T Consensus 30 d~~v~v~D~~t~-~~~~~i~~g-----~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--~~~i~~~ 100 (361)
T 2oiz_A 30 ESRVHVYDYTNG-KFLGMVPTA-----FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF--EKEISLP 100 (361)
T ss_dssp GCEEEEEETTTC-CEEEEEECC-----EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE--EEEEEEC
T ss_pred cCeEEEEECCCC-eEEEEecCC-----CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE--EEEEEcC
Confidence 457999998876 222333332 222 67899999998877642110 0001236799999988762 2233211
Q ss_pred ------CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE-EcCCCCCcc------ccCcCceeC
Q 006979 243 ------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-VAGFDPTIV------ESPTEPKWS 309 (623)
Q Consensus 243 ------~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~ws 309 (623)
........+||||++|+...... ...|.++|++++.. ... +.-.. .|. ........+
T Consensus 101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~------~~~v~v~d~~~~~~---~~~~i~~~~-~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 101 PKRVQGLNYDGLFRQTTDGKFIVLQNASP------ATSIGIVDVAKGDY---VEDVTAAAG-CWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp TTBCCBCCCGGGEEECTTSSEEEEEEESS------SEEEEEEETTTTEE---EEEEGGGTT-EEEEEECTTSSSEEEEEE
T ss_pred ccccccCCCcceEEECCCCCEEEEECCCC------CCeEEEEECCCCcE---EEEEecCCC-cceeEEcCCCCeeEEEEC
Confidence 12345568999999987664321 34588888876632 111 11000 000 000112334
Q ss_pred CCCcEEEEEeCCCCe-----------------------------------eeEEEEecCCCeEEEEeec---cccccccc
Q 006979 310 SKGELFFVTDRKNGF-----------------------------------WNLHKWIESNNEVLAIYSL---DAEFSRPL 351 (623)
Q Consensus 310 ~DG~l~~~~~~~~g~-----------------------------------~~L~~~d~~~~~~~~l~~~---~~~~~~~~ 351 (623)
+||+++++.....+. ..++.+|..+++.+.+... ........
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 455522222110111 1245555544332222110 00001122
Q ss_pred cccc-CcceeEEeecCCCCEEEEEEEEC--------CeEEEEEEeCCCCcee-ecccCCcceEee--eecCCEEEEEEec
Q 006979 352 WVFG-INSYEIIQSHGEKNLIACSYRQN--------GRSYLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGAS 419 (623)
Q Consensus 352 w~~~-~~~~~~l~~s~~~~~l~~~~~~~--------g~~~L~~~d~~~~~~~-~lt~~~~~v~~~--~~~~~~~~~~~~s 419 (623)
|.+. ...+.+. ++++.+|+....+ +...|+++|+++++.. .+..+. ...+ +++++++|.. ..
T Consensus 251 ~~p~g~~~~a~~---~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~-n~ 324 (361)
T 2oiz_A 251 WVPGGYNLVGLH---RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTL-DG 324 (361)
T ss_dssp CEECCSSCEEEE---TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEE-CS
T ss_pred cccCCeeEEEEe---cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEe-CC
Confidence 3332 1234444 3778888776522 2357999999887654 455444 3333 7888866643 22
Q ss_pred CCCCCeEEEEEcCCCcc
Q 006979 420 GVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 420 ~~~~~~ly~~~l~~~~~ 436 (623)
..|.++|++++++
T Consensus 325 ----~~v~v~D~~t~~l 337 (361)
T 2oiz_A 325 ----GNVNVYDISQPEP 337 (361)
T ss_dssp ----SCEEEEECSSSSC
T ss_pred ----CeEEEEECCCCcc
Confidence 7799999998843
No 291
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.74 E-value=2.1e-06 Score=89.44 Aligned_cols=230 Identities=13% Similarity=0.032 Sum_probs=142.0
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.++|.. ...|++++++++ ..+.+... ..+...+.|++.++.|+++.... ..|++++++++.
T Consensus 89 ~l~~~~--~~~I~~i~~~~~--~~~~~~~~----~~~~~gl~~d~~~~~ly~~D~~~--------~~I~r~~~~g~~--- 149 (386)
T 3v65_B 89 VLLFAN--RIDIRQVLPHRS--EYTLLLNN----LENAIALDFHHRRELVFWSDVTL--------DRILRANLNGSN--- 149 (386)
T ss_dssp EEEEEC--BSCEEEECTTSC--CCEEEECS----CSCEEEEEEETTTTEEEEEETTT--------TEEEEEETTSCC---
T ss_pred eeEeec--CccceeeccCCC--cEEEEecC----CCccEEEEEecCCCeEEEEeCCC--------CcEEEEecCCCC---
Confidence 466663 356999999876 45555443 23455688999888888865432 679999999876
Q ss_pred ceec-ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcE
Q 006979 236 PKVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 314 (623)
Q Consensus 236 ~~~l-~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l 314 (623)
.+.+ ..+.....+.++.+.++.|+|.... ...|+++++++.. ...++.... ..+...+.+|++..
T Consensus 150 ~~~~~~~~~~~p~glavd~~~g~lY~~d~~-------~~~I~~~~~dg~~---~~~l~~~~l----~~P~giavdp~~g~ 215 (386)
T 3v65_B 150 VEEVVSTGLESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAH---RKVLLWQSL----EKPRAIALHPMEGT 215 (386)
T ss_dssp EEEEECSSCSCCCCEEEETTTTEEEEEETT-------TTEEEECBTTSCS---CEEEECSSC----SCEEEEEEETTTTE
T ss_pred cEEEEeCCCCCccEEEEEeCCCeEEEEcCC-------CCeEEEEeCCCCc---eEEeecCCC----CCCcEEEEEcCCCe
Confidence 4443 3333344567788888999988633 3468888887652 233333222 34456788887664
Q ss_pred EEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee
Q 006979 315 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (623)
Q Consensus 315 ~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~ 394 (623)
+|.++. .....|+++++++...+.+.... +..| +.+.+- ++++.|||+. .+..+|+++|++++..+
T Consensus 216 ly~td~-~~~~~I~r~~~dG~~~~~~~~~~--~~~P------nGlavd---~~~~~lY~aD--~~~~~I~~~d~dG~~~~ 281 (386)
T 3v65_B 216 IYWTDW-GNTPRIEASSMDGSGRRIIADTH--LFWP------NGLTID---YAGRRMYWVD--AKHHVIERANLDGSHRK 281 (386)
T ss_dssp EEEEEC-SSSCEEEEEETTSCSCEEEECSS--CSCE------EEEEEE---GGGTEEEEEE--TTTTEEEEECTTSCSCE
T ss_pred EEEecc-CCCCEEEEEeCCCCCcEEEEECC--CCCe------eeEEEe---CCCCEEEEEE--CCCCEEEEEeCCCCeeE
Confidence 455565 23378999999876655554321 1111 233443 2678899886 44568999999876655
Q ss_pred eccc-CCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 395 LLDI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 395 ~lt~-~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.+.. +...-.++..+++.+|++.. ....|++++..+|+
T Consensus 282 ~~~~~~~~~P~giav~~~~ly~td~---~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 282 AVISQGLPHPFAITVFEDSLYWTDW---HTKSINSANKFTGK 320 (386)
T ss_dssp EEECSSCSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEECCCCCceEEEEECCEEEEeeC---CCCeEEEEECCCCc
Confidence 4432 22223344446677777643 23568888854444
No 292
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=98.74 E-value=7.1e-08 Score=97.65 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=71.7
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHc-CceEEEEECCCCCCCCchhHHHhhccCCcc-chHHHHHHHHHHHHhCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGI-VDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~-~~~~D~~~~~~~l~~~~~~d~ 573 (623)
|.||++||++. ....|......|++ .+|.|+++|+||.|.+... ....+.. ...+|+.+.++.+... + +
T Consensus 39 p~lvllHG~~~--~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~----~~~~~~~~~~a~dl~~~l~~l~~~--~-~ 109 (316)
T 3c5v_A 39 PVLLLLHGGGH--SALSWAVFTAAIISRVQCRIVALDLRSHGETKVK----NPEDLSAETMAKDVGNVVEAMYGD--L-P 109 (316)
T ss_dssp CEEEEECCTTC--CGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCS----CTTCCCHHHHHHHHHHHHHHHHTT--C-C
T ss_pred cEEEEECCCCc--ccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCC----CccccCHHHHHHHHHHHHHHHhcc--C-C
Confidence 67999999843 33456677778876 3899999999997655321 0011211 2356777778777432 1 2
Q ss_pred CceEEEEcChHHHHHHHHh-c--CCCceeEEEecccC
Q 006979 574 KRLCITGGSAGGYTTLAAL-A--FRDTFKAGASLYGV 607 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~--~~~~f~a~v~~~g~ 607 (623)
+++.|+||||||.+++.++ . +|+ ++++|...+.
T Consensus 110 ~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 110 PPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp CCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred CCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 6899999999999999988 4 466 8888887653
No 293
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.74 E-value=2e-06 Score=88.25 Aligned_cols=156 Identities=12% Similarity=0.071 Sum_probs=95.2
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCC--CceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDS--SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~--~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L 223 (623)
+.+..++++ .++++...++.|+++++.++ . ....+... ........|+|+|++|+....+ ..|
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~d---------g~i 76 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEH----NGQVTGVDWAPDSNRIVTCGTD---------RNA 76 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETT-EEEEEEEEECC----SSCEEEEEEETTTTEEEEEETT---------SCE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCC-cEEeeeeecCC----CCcccEEEEeCCCCEEEEEcCC---------CeE
Confidence 456666655 45556656788999998765 1 22333322 3346678899999988876543 447
Q ss_pred EEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE-cCCCCCcccc
Q 006979 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AGFDPTIVES 302 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 302 (623)
.++|+.+++......+...........|+|||++|+....+. .|.+++++.+........+ .+.. ..
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~~~~~~~~~~~~~~~~----~~ 144 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQENDWWVCKHIKKPIR----ST 144 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEETTTTEEEEEEECTTCC----SC
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecCCCcceeeeeeecccC----CC
Confidence 778887765211112233334456688999999988776332 2777787766421112222 2223 45
Q ss_pred CcCceeCCCCcEEEEEeCCCCeeeEEE
Q 006979 303 PTEPKWSSKGELFFVTDRKNGFWNLHK 329 (623)
Q Consensus 303 ~~~~~ws~DG~l~~~~~~~~g~~~L~~ 329 (623)
+....|+||+++++.... ++.-.+|-
T Consensus 145 i~~~~~~~~~~~l~~~~~-dg~i~~~d 170 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSC-DFKCRIFS 170 (372)
T ss_dssp EEEEEECTTSSEEEEEET-TSCEEEEE
T ss_pred eeEEEEcCCCCEEEEEcC-CCCEEEEE
Confidence 678899999985555554 45544543
No 294
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.73 E-value=3e-08 Score=99.04 Aligned_cols=101 Identities=13% Similarity=-0.027 Sum_probs=73.8
Q ss_pred CCCEEEEecCCCCCcc---cCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 494 KPPLLVKSHGGPTSEA---RGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~---~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
+.|.||++||...... ...|....+.|.++||.|+.+|++|.+.. . ...+++.+.++.++++
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s---~----------~~~~~~~~~i~~~~~~-- 70 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS---E----------VRGEQLLQQVEEIVAL-- 70 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCH---H----------HHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCc---h----------hhHHHHHHHHHHHHHH--
Confidence 4567899999854432 23677788999999999999999985432 1 1234444444444332
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSI 609 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d 609 (623)
.+.++|.++|||+||.+++.++ .+|+.++++|.++++..
T Consensus 71 ~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 71 SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 1346999999999999999998 78999999999988643
No 295
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.73 E-value=4.3e-07 Score=104.06 Aligned_cols=239 Identities=9% Similarity=0.006 Sum_probs=140.3
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ ..+++...++.|.++|+.++ .....+... ........|+|+|++|+....+ ..|.+
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~v 81 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-VEVRSIQVT----ETPVRAGKFIARKNWIIVGSDD---------FRIRV 81 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTT-EEEEEEECC----SSCEEEEEEEGGGTEEEEEETT---------SEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCC-ceEEEEecC----CCcEEEEEEeCCCCEEEEEeCC---------CeEEE
Confidence 456666666 34444456788999999876 233444432 3456778999999998887553 56899
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+.+++. ...+....+.+....|||||++|+....+ ..|.+++++++.. ....+.+.. ..+..
T Consensus 82 w~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~vw~~~~~~~--~~~~~~~~~----~~v~~ 145 (814)
T 3mkq_A 82 FNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWENNWA--LEQTFEGHE----HFVMC 145 (814)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETT--------SEEEEEEGGGTSE--EEEEEECCS----SCEEE
T ss_pred EECCCCcE--EEEEecCCCCEEEEEEeCCCCEEEEEcCC--------CEEEEEECCCCce--EEEEEcCCC----CcEEE
Confidence 99988762 34444444556678999999998866522 3488889887632 333444444 45678
Q ss_pred ceeCC-CCcEEEEEeCCCCeeeEEEEecCCCeEE-EEeec-ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEE
Q 006979 306 PKWSS-KGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 382 (623)
Q Consensus 306 ~~ws~-DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~~~-~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~ 382 (623)
..|+| ||++++.... ++ .|..+|..+++.. .+... ...+....|.+. ++++ ++++...+|.
T Consensus 146 ~~~~p~~~~~l~~~~~-dg--~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~~-~l~~~~~dg~-- 209 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCL-DR--TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL----------PDKP-YMITASDDLT-- 209 (814)
T ss_dssp EEEETTEEEEEEEEET-TS--EEEEEETTCSSCSEEEECCCTTCCCEEEECCS----------TTCC-EEEEECTTSE--
T ss_pred EEEEcCCCCEEEEEeC-CC--eEEEEECCCCcceeEEecCCCCCEEEEEEEEC----------CCCC-EEEEEeCCCE--
Confidence 89999 7765555544 34 4556676555432 22221 122333333321 1344 4445545554
Q ss_pred EEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 383 LGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 383 L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
|.++|..+++. ..+......+..+ ++++..++. ++.. ..|+.+++.+++
T Consensus 210 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d---g~v~vwd~~~~~ 261 (814)
T 3mkq_A 210 IKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS-GSED---GTLKIWNSSTYK 261 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE-EETT---SCEEEEETTTCS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE-EeCC---CeEEEEECCCCc
Confidence 55567666654 3444344445544 556664443 3321 356667766654
No 296
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=98.73 E-value=5.4e-08 Score=95.16 Aligned_cols=104 Identities=9% Similarity=-0.009 Sum_probs=73.0
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCC
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 571 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~ 571 (623)
....|.||++||.+. ....|...+..|++. |.|+.+|+||.|. +.. .......++..+.+..++++ .
T Consensus 17 ~~~~~~vv~~HG~~~--~~~~~~~~~~~l~~~-~~v~~~d~~G~G~---s~~-----~~~~~~~~~~~~~~~~~l~~--~ 83 (267)
T 3fla_A 17 PDARARLVCLPHAGG--SASFFFPLAKALAPA-VEVLAVQYPGRQD---RRH-----EPPVDSIGGLTNRLLEVLRP--F 83 (267)
T ss_dssp TTCSEEEEEECCTTC--CGGGGHHHHHHHTTT-EEEEEECCTTSGG---GTT-----SCCCCSHHHHHHHHHHHTGG--G
T ss_pred CCCCceEEEeCCCCC--CchhHHHHHHHhccC-cEEEEecCCCCCC---CCC-----CCCCcCHHHHHHHHHHHHHh--c
Confidence 445689999999943 344666777777665 9999999999543 211 11123455555555554443 2
Q ss_pred CCCceEEEEcChHHHHHHHHh-cCCCc----eeEEEecccCC
Q 006979 572 DEKRLCITGGSAGGYTTLAAL-AFRDT----FKAGASLYGVS 608 (623)
Q Consensus 572 d~~rv~i~G~S~GG~~~~~~~-~~~~~----f~a~v~~~g~~ 608 (623)
+.+++.|+|||+||++++.++ .+|+. ++++|...+..
T Consensus 84 ~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~ 125 (267)
T 3fla_A 84 GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRA 125 (267)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCC
T ss_pred CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCc
Confidence 457999999999999999999 78875 78888776653
No 297
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=98.73 E-value=3e-08 Score=96.89 Aligned_cols=93 Identities=16% Similarity=0.108 Sum_probs=68.0
Q ss_pred EEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCce
Q 006979 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRL 576 (623)
Q Consensus 497 liv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv 576 (623)
.||++||.+. ....|...+..|+ .+|.|+++|+||.|.+... .....++. ++.+.+. ++ +++
T Consensus 15 ~vvllHG~~~--~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~~--l~-~~~ 76 (258)
T 1m33_A 15 HLVLLHGWGL--NAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQQ--AP-DKA 76 (258)
T ss_dssp EEEEECCTTC--CGGGGGGTHHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHHH---HHHHHTT--SC-SSE
T ss_pred eEEEECCCCC--ChHHHHHHHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHHH---HHHHHHH--hC-CCe
Confidence 7899999843 3345666677776 5899999999996654332 12234443 3444443 34 799
Q ss_pred EEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 577 CITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 577 ~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
.++|||+||.+++.++ .+|++++++|...+.
T Consensus 77 ~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 108 (258)
T 1m33_A 77 IWLGWSLGGLVASQIALTHPERVRALVTVASS 108 (258)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred EEEEECHHHHHHHHHHHHhhHhhceEEEECCC
Confidence 9999999999999998 899999999987653
No 298
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.73 E-value=9.4e-09 Score=109.19 Aligned_cols=111 Identities=10% Similarity=-0.067 Sum_probs=79.6
Q ss_pred CCCCEEEEecCCCCCcccCcCCH-HhHHHHcC-ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNL-SIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~-~~~~~a~~-G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
...|.||++||.+... ...|.. .+..|.++ ||.|+++|+||.|... +..... +. ....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~--~~~~~~-~~-~~~~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE--YTQASY-NT-RVVGAEIAFLVQVLSTEMG 142 (452)
T ss_dssp TTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC--HHHHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCc--hhHhHh-hH-HHHHHHHHHHHHHHHHhcC
Confidence 3458999999996443 123444 45666664 9999999999865543 211111 11 1235788888899876534
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.+++.|+|||+||++++.++ .+|++++.++...|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 6678999999999999999999 8899999999887653
No 299
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=98.19 E-value=1.3e-09 Score=108.72 Aligned_cols=108 Identities=17% Similarity=0.126 Sum_probs=72.8
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|.||++||.+. ....|...+..|+ +||.|+.+|+||.|....... .........++..+.+..+++. .+.+
T Consensus 25 ~p~vv~lHG~~~--~~~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~---~~~~~~~~~~~~~~~l~~~l~~--l~~~ 96 (304)
T 3b12_A 25 GPALLLLHGFPQ--NLHMWARVAPLLA-NEYTVVCADLRGYGGSSKPVG---APDHANYSFRAMASDQRELMRT--LGFE 96 (304)
Confidence 367999999854 3345666777787 899999999999665433210 0001112233333333333322 2346
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
++.++|||+||.+++.++ .+|++++++|...|....
T Consensus 97 ~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 133 (304)
T 3b12_A 97 RFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTY 133 (304)
Confidence 899999999999999988 789999999999887553
No 300
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.1e-06 Score=91.68 Aligned_cols=240 Identities=10% Similarity=0.008 Sum_probs=131.8
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcE
Q 006979 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (623)
Q Consensus 90 ~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l 167 (623)
.+..+.|+| +..++ +-.. +|...+|. .. ++....+.. |...+.+..++++ ..+++...++.|
T Consensus 110 ~v~~~~~s~~~~~l~-~~~~---dg~i~i~~--~~--~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIV-TGVE---NGELRLWN--KT--GALLNVLNF--------HRAPIVSVKWNKDGTHIISMDVENVT 173 (425)
T ss_dssp CEEEEEECTTSSEEE-EEET---TSCEEEEE--TT--SCEEEEECC--------CCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred ceEEEEEcCCCCEEE-EEeC---CCeEEEEe--CC--CCeeeeccC--------CCccEEEEEECCCCCEEEEEecCCeE
Confidence 567888888 54444 3322 46766775 22 222222221 1112345556555 444555567889
Q ss_pred EEEeCCCCCCCceecCCCCCC-----------CCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccc
Q 006979 168 YKHSIDSKDSSPLPITPDYGE-----------PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEP 236 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~-----------~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~ 236 (623)
.++|+.++ .....+...... .........|+|++. ++....+ ..|+++|+.+++. .
T Consensus 174 ~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------g~i~~~d~~~~~~--~ 240 (425)
T 1r5m_A 174 ILWNVISG-TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK---------GAIFVYQITEKTP--T 240 (425)
T ss_dssp EEEETTTT-EEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG---------GCEEEEETTCSSC--S
T ss_pred EEEECCCC-cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC---------CeEEEEEcCCCce--e
Confidence 99999866 222333322000 000156678999875 4333332 5689999988752 3
Q ss_pred eecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEE
Q 006979 237 KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 316 (623)
Q Consensus 237 ~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~ 316 (623)
..+...........|+|||++|+....+. .|.++|+..+. ....+.+.. ..+..+.|+||| +++
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~---~~~~~~~~~----~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTNKLLLSASDDG--------TLRIWHGGNGN---SQNCFYGHS----QSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTS--------CEEEECSSSBS---CSEEECCCS----SCEEEEEEETTT-EEE
T ss_pred eeeccCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCc---cceEecCCC----ccEEEEEECCCC-EEE
Confidence 33433344456678999999887765332 38888887653 233444443 456788999999 555
Q ss_pred EEeCCCCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCc
Q 006979 317 VTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (623)
Q Consensus 317 ~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~ 392 (623)
.... ++ .|..+|..+++...... ....+....|. |+++.|+ +...+|.-++ +|+.+++
T Consensus 305 ~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s------------~~~~~l~-~~~~dg~i~i--~~~~~~~ 363 (425)
T 1r5m_A 305 SCSM-DG--SVRLWSLKQNTLLALSIVDGVPIFAGRIS------------QDGQKYA-VAFMDGQVNV--YDLKKLN 363 (425)
T ss_dssp EEET-TS--EEEEEETTTTEEEEEEECTTCCEEEEEEC------------TTSSEEE-EEETTSCEEE--EECHHHH
T ss_pred EEeC-CC--cEEEEECCCCcEeEecccCCccEEEEEEc------------CCCCEEE-EEECCCeEEE--EECCCCc
Confidence 5544 34 56677877776444332 22223333333 2666554 4445665444 4554443
No 301
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.72 E-value=6.1e-06 Score=91.52 Aligned_cols=201 Identities=8% Similarity=-0.047 Sum_probs=115.8
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcEE
Q 006979 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (623)
Q Consensus 91 ~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l~ 168 (623)
...+.++| |+.+..-. ++...||..... +....+.. |...+.+.++++| .++.+...++.|.
T Consensus 21 ~~~~~~spdg~~l~~~~-----~~~v~l~~~~~~---~~~~~~~~--------h~~~v~~~~~spdg~~lasg~~d~~v~ 84 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCN-----GTSVYTVPVGSL---TDTEIYTE--------HSHQTTVAKTSPSGYYCASGDVHGNVR 84 (611)
T ss_dssp CCCCEECTTSSEEEEEE-----TTEEEEEETTCS---SCCEEECC--------CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeEEeeCCCCCEEEeCC-----CCEEEEecCCCc---ccCeEecC--------CCCceEEEEECCCCcEEEEEeCCCCEE
Confidence 34677888 66666533 244455554322 22222211 2222455667766 5666666788899
Q ss_pred EEeCCCCCCCc-eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCccc
Q 006979 169 KHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYA 247 (623)
Q Consensus 169 ~~d~~~g~~~~-~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~ 247 (623)
++|+.++.... ..+... .....+.+|||||++|+.+.++... ...++++|. ++. ...+....+.+.
T Consensus 85 lWd~~~~~~~~~~~~~~~----~~~v~~v~fs~dg~~l~~~~~~~~~-----~~~v~~wd~--~~~--~~~l~gh~~~v~ 151 (611)
T 1nr0_A 85 IWDTTQTTHILKTTIPVF----SGPVKDISWDSESKRIAAVGEGRER-----FGHVFLFDT--GTS--NGNLTGQARAMN 151 (611)
T ss_dssp EEESSSTTCCEEEEEECS----SSCEEEEEECTTSCEEEEEECCSSC-----SEEEEETTT--CCB--CBCCCCCSSCEE
T ss_pred EeECCCCcceeeEeeccc----CCceEEEEECCCCCEEEEEECCCCc-----eeEEEEeeC--CCC--cceecCCCCCce
Confidence 99986541111 122221 2346788999999999887654321 146777764 321 334544445567
Q ss_pred ceeeCCCCCE-EEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeee
Q 006979 248 FPRMDPRGER-MAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 326 (623)
Q Consensus 248 ~p~wSPDG~~-la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~ 326 (623)
..+|+||++. |+-...|. .|.+.|.... .....+.+.. ..+....|+|||+++..... ++.
T Consensus 152 ~v~f~p~~~~~l~s~s~D~--------~v~lwd~~~~---~~~~~l~~H~----~~V~~v~fspdg~~las~s~-D~~-- 213 (611)
T 1nr0_A 152 SVDFKPSRPFRIISGSDDN--------TVAIFEGPPF---KFKSTFGEHT----KFVHSVRYNPDGSLFASTGG-DGT-- 213 (611)
T ss_dssp EEEECSSSSCEEEEEETTS--------CEEEEETTTB---EEEEEECCCS----SCEEEEEECTTSSEEEEEET-TSC--
T ss_pred EEEECCCCCeEEEEEeCCC--------eEEEEECCCC---eEeeeecccc----CceEEEEECCCCCEEEEEEC-CCc--
Confidence 7889999985 55444332 2666676544 2334455554 56778899999995555544 454
Q ss_pred EEEEecCCCeEE
Q 006979 327 LHKWIESNNEVL 338 (623)
Q Consensus 327 L~~~d~~~~~~~ 338 (623)
|..+|..+++..
T Consensus 214 i~lwd~~~g~~~ 225 (611)
T 1nr0_A 214 IVLYNGVDGTKT 225 (611)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCcEe
Confidence 445566666543
No 302
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.72 E-value=1e-08 Score=108.54 Aligned_cols=111 Identities=14% Similarity=-0.011 Sum_probs=79.4
Q ss_pred CCCCEEEEecCCCCCcccCcCCH-HhHHHHc-CceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNL-SIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~-~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
...|.||++||.+... ...|.. .+..|++ .||.|+.+|+||.+... +..... +. ....+|+.+.+++|.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~--~~~~~~-~~-~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQ--YSQASQ-NI-RVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSC--HHHHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCcc--chhhHh-hH-HHHHHHHHHHHHHHHHhcC
Confidence 3458999999985433 123433 5666776 79999999999865433 211111 01 1234788889999976534
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.++|.++|||+||++++.++ .+|++++.++...|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 6678999999999999999998 7888898888887654
No 303
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.72 E-value=3.3e-08 Score=100.18 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=75.8
Q ss_pred CCCCEEEEecCCCCCccc----CcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhC
Q 006979 493 EKPPLLVKSHGGPTSEAR----GILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS 568 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~----~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~ 568 (623)
++.|.||++||....... ..|....+.|+++||.|+.+|++|.+..... ....+++.+.++.++++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~----------~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP----------NGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST----------TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----------CCCHHHHHHHHHHHHHH
Confidence 345679999998544321 4567788999999999999999986653211 12234444444444433
Q ss_pred CCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 569 GKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 569 ~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.+.++|.++|||+||.+++.++ .+|+.++++|.+++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 1347999999999999999998 7899999999998874
No 304
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.70 E-value=2.5e-06 Score=87.31 Aligned_cols=198 Identities=11% Similarity=0.041 Sum_probs=114.0
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCc---eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~---~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
..+++++ .++.+...++.|.++++.++ .. ..+..+ ........+|+|+|++|+....+ ..+.
T Consensus 21 ~l~~sp~g~~las~~~D~~i~iw~~~~~--~~~~~~~~~~~---h~~~v~~~~~sp~g~~l~s~s~D---------~~v~ 86 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRIWGTEGD--SWICKSVLSEG---HQRTVRKVAWSPCGNYLASASFD---------ATTC 86 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEEEETT--EEEEEEEECSS---CSSCEEEEEECTTSSEEEEEETT---------SCEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCCC--cceeeeeeccc---cCCcEEEEEECCCCCEEEEEECC---------CcEE
Confidence 3455555 45556667788888888754 21 122221 12346678899999988876654 3355
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCc
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (623)
+.++.++..+....+......+...+|||||++|+-...|. .|.+.|+..+........+.+.. ..+.
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~--------~v~iwd~~~~~~~~~~~~~~~h~----~~v~ 154 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--------SVWVWEVDEEDEYECVSVLNSHT----QDVK 154 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECTTSCEEEEEEECCCC----SCEE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC--------eEEEEECCCCCCeEEEEEecCcC----CCeE
Confidence 66666554111233444444566788999999988776443 27888887664322233344444 4567
Q ss_pred CceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEe---ecccccccccccccCcceeEEeecCCCCEEEEEEEECCeE
Q 006979 305 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY---SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (623)
Q Consensus 305 ~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~---~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~ 381 (623)
...|+|||++++.... ++.-+|| |..+++...+. .....+... .|. |+++.| ++...++.-
T Consensus 155 ~~~~~p~~~~l~s~s~-d~~i~~w--~~~~~~~~~~~~~~~h~~~v~~l---------~~s---p~g~~l-~s~s~D~~v 218 (345)
T 3fm0_A 155 HVVWHPSQELLASASY-DDTVKLY--REEEDDWVCCATLEGHESTVWSL---------AFD---PSGQRL-ASCSDDRTV 218 (345)
T ss_dssp EEEECSSSSCEEEEET-TSCEEEE--EEETTEEEEEEEECCCSSCEEEE---------EEC---TTSSEE-EEEETTSCE
T ss_pred EEEECCCCCEEEEEeC-CCcEEEE--EecCCCEEEEEEecCCCCceEEE---------EEC---CCCCEE-EEEeCCCeE
Confidence 8899999995544444 4655555 44455433222 222222222 332 266544 455578888
Q ss_pred EEEEEeC
Q 006979 382 YLGILDD 388 (623)
Q Consensus 382 ~L~~~d~ 388 (623)
+||....
T Consensus 219 ~iW~~~~ 225 (345)
T 3fm0_A 219 RIWRQYL 225 (345)
T ss_dssp EEEEEEC
T ss_pred EEecccc
Confidence 8887644
No 305
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=98.70 E-value=5.7e-08 Score=96.38 Aligned_cols=123 Identities=13% Similarity=0.063 Sum_probs=77.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCccc--C-cCC-HHhHHHHcCceEEEEECCCCCCCCchhHHHhh
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR--G-ILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERL 546 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~--~-~~~-~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~ 546 (623)
+|.+++...+-+. ....|.||++||.+..... . .|. ..+..|++ +|.|+.+|+||.|......
T Consensus 19 ~~~~l~y~~~G~~--------~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~---- 85 (286)
T 2qmq_A 19 PYGSVTFTVYGTP--------KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVF---- 85 (286)
T ss_dssp TTEEEEEEEESCC--------CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCC----
T ss_pred CCeEEEEEeccCC--------CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCC----
Confidence 5777776555432 1234889999998544321 0 122 15666766 6999999999965322110
Q ss_pred ccCCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 547 LGRWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 547 ~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
.........+++.+.+..++++ .+.+++.++|||+||.+++.++ .+|++++++|...|..
T Consensus 86 ~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 86 PLGYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp CTTCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 0111111344444433333322 1235899999999999999998 8899999999998865
No 306
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.69 E-value=4.4e-06 Score=85.76 Aligned_cols=230 Identities=13% Similarity=0.032 Sum_probs=140.3
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.++|+. ...|+++++++. ..+.+... ..+...+.|++.++.|+++.... ..|++++++++.
T Consensus 46 ~ll~~~--~~~I~~i~~~g~--~~~~~~~~----~~~~~~l~~d~~~~~ly~~D~~~--------~~I~r~~~~g~~--- 106 (349)
T 3v64_C 46 VLLFAN--RIDIRQVLPHRS--EYTLLLNN----LENAIALDFHHRRELVFWSDVTL--------DRILRANLNGSN--- 106 (349)
T ss_dssp EEEEEC--BSCEEEECTTSC--CEEEEECS----CSCEEEEEEETTTTEEEEEETTT--------TEEEEEETTSCS---
T ss_pred eeEeec--ccceEEEeCCCC--eeEEeecC----CCceEEEEEeccccEEEEEeccC--------CceEEEecCCCC---
Confidence 466763 345999999865 44554433 23345678999888888865432 679999999876
Q ss_pred ceec-ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcE
Q 006979 236 PKVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 314 (623)
Q Consensus 236 ~~~l-~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l 314 (623)
.+.+ ..+.....+.++.++++.|+|.... ...|+++++++.. ...++...- ..+...+.+|++..
T Consensus 107 ~~~~~~~~~~~p~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~---~~~l~~~~l----~~P~~iavdp~~g~ 172 (349)
T 3v64_C 107 VEEVVSTGLESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAH---RKVLLWQSL----EKPRAIALHPMEGT 172 (349)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSCS---CEEEECTTC----SCEEEEEEETTTTE
T ss_pred ceEEEeCCCCCccEEEEecCCCeEEEEcCC-------CCeEEEEcCCCCc---eEEEEeCCC----CCcceEEEecCcCe
Confidence 4444 3333444567788888899998633 3469999988652 233333222 34557788886664
Q ss_pred EEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee
Q 006979 315 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (623)
Q Consensus 315 ~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~ 394 (623)
+|.++. .....|+++++++...+.+.... +..| +.+.+. ++++.|||+. .+..+|+++|++++..+
T Consensus 173 ly~td~-~~~~~I~r~~~dG~~~~~~~~~~--~~~P------nGla~d---~~~~~lY~aD--~~~~~I~~~~~dG~~~~ 238 (349)
T 3v64_C 173 IYWTDW-GNTPRIEASSMDGSGRRIIADTH--LFWP------NGLTID---YAGRRMYWVD--AKHHVIERANLDGSHRK 238 (349)
T ss_dssp EEEEEC-SSSCEEEEEETTSCSCEESCCSS--CSCE------EEEEEE---TTTTEEEEEE--TTTTEEEEEETTSCSCE
T ss_pred EEEecc-CCCCEEEEEeCCCCCcEEEEECC--CCCc------ceEEEe---CCCCEEEEEE--CCCCEEEEEeCCCCceE
Confidence 455565 23378999998876555554321 1111 233443 2678899886 34568999999876655
Q ss_pred ecc-cCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 395 LLD-IPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 395 ~lt-~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.+. .+...-.++..+++.+|++-. ....|++++..+|+
T Consensus 239 ~~~~~~~~~P~giav~~~~ly~td~---~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 239 AVISQGLPHPFAITVFEDSLYWTDW---HTKSINSANKFTGK 277 (349)
T ss_dssp EEECSSCSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEeCCCCCceEEEEECCEEEEecC---CCCeEEEEEccCCC
Confidence 433 222222344445677776643 22467777744443
No 307
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.69 E-value=8.4e-06 Score=84.26 Aligned_cols=205 Identities=9% Similarity=0.015 Sum_probs=122.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC-C-EEEEEeCCCC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-D-TVIFSNYKDQ 165 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~-d-~l~f~~~~~~ 165 (623)
..+..+.|+| +..++..-.. +|...+|..... +....+... -|...+.+..+++ + ..+++...++
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~---~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK---GGDIILWDYDVQ---NKTSFIQGM------GPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB---TSCEEEEETTST---TCEEEECCC------STTCBEEEEEEETTEEEEEEEEETTT
T ss_pred CCEEEEEECCCCCCEEEEEcC---CCeEEEEeCCCc---ccceeeecC------CcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 4456788888 5355555433 477777766433 222222110 0122245666776 3 6677777788
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCc
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~ 245 (623)
.|.++|+.+. ..+.+.... ..........|+|+++.|+....+ ..|+++|+.+.. ...+......
T Consensus 142 ~i~iwd~~~~--~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~---~~~~~~h~~~ 206 (383)
T 3ei3_B 142 ATTLRDFSGS--VIQVFAKTD-SWDYWYCCVDVSVSRQMLATGDST---------GRLLLLGLDGHE---IFKEKLHKAK 206 (383)
T ss_dssp EEEEEETTSC--EEEEEECCC-CSSCCEEEEEEETTTTEEEEEETT---------SEEEEEETTSCE---EEEEECSSSC
T ss_pred EEEEEECCCC--ceEEEeccC-CCCCCeEEEEECCCCCEEEEECCC---------CCEEEEECCCCE---EEEeccCCCc
Confidence 8999999854 444444321 112345678899999988776543 568999996544 4555544455
Q ss_pred ccceeeCCCCC-EEEEEEecCCCCCCCceEEEEEEecCCCce-eeeEEEcCCCCCccccCcCceeCC-CCcEEEEEeCCC
Q 006979 246 YAFPRMDPRGE-RMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKN 322 (623)
Q Consensus 246 ~~~p~wSPDG~-~la~~~~~~~~~p~~~~~L~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ws~-DG~l~~~~~~~~ 322 (623)
+....|+|||+ .|+... . ...|.++|+...... .....+ +.. ..+..+.|+| ||++++.... +
T Consensus 207 v~~~~~~~~~~~~l~s~~-~-------d~~i~iwd~~~~~~~~~~~~~~-~~~----~~v~~~~~s~~~~~~l~~~~~-d 272 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSS-V-------DATVKLWDLRNIKDKNSYIAEM-PHE----KPVNAAYFNPTDSTKLLTTDQ-R 272 (383)
T ss_dssp EEEEEECSSCTTEEEEEE-T-------TSEEEEEEGGGCCSTTCEEEEE-ECS----SCEEEEEECTTTSCEEEEEES-S
T ss_pred EEEEEECCCCCCEEEEEe-C-------CCEEEEEeCCCCCcccceEEEe-cCC----CceEEEEEcCCCCCEEEEEcC-C
Confidence 66788999999 454443 2 234888898863210 112222 333 4677899999 9985555444 3
Q ss_pred CeeeEEEEecCCCe
Q 006979 323 GFWNLHKWIESNNE 336 (623)
Q Consensus 323 g~~~L~~~d~~~~~ 336 (623)
+ .|..+|..+++
T Consensus 273 ~--~i~iwd~~~~~ 284 (383)
T 3ei3_B 273 N--EIRVYSSYDWS 284 (383)
T ss_dssp S--EEEEEETTBTT
T ss_pred C--cEEEEECCCCc
Confidence 4 45566666554
No 308
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.69 E-value=9.4e-07 Score=90.81 Aligned_cols=202 Identities=10% Similarity=0.106 Sum_probs=125.7
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEe--CCEEEEEeCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNYKD 164 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s--~d~l~f~~~~~ 164 (623)
...+.++.|++ ++.|||.+... + .|++.+.+++ ..+.+...+.. . ...++++ .+.|||.+...
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~---~--~I~r~~~~g~-~~~~~~~~~~~------~--p~glavd~~~g~ly~~d~~~ 137 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTL---D--RILRANLNGS-NVEEVVSTGLE------S--PGGLAVDWVHDKLYWTDSGT 137 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTT---T--EEEEEETTSC-SCEEEECSSCS------C--CCEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEEeccccEEEEEeccC---C--ceEEEecCCC-CceEEEeCCCC------C--ccEEEEecCCCeEEEEcCCC
Confidence 34567888998 99999998552 3 4777776522 33333322210 0 1234444 55899998888
Q ss_pred CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc-CC
Q 006979 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GS 243 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~-~~ 243 (623)
++|+++++++. ..+.+... ....-.+.+++|++..|+++.... ...|+++++++.. .+.+.. +.
T Consensus 138 ~~I~~~~~dG~--~~~~l~~~---~l~~P~~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~---~~~~~~~~~ 202 (349)
T 3v64_C 138 SRIEVANLDGA--HRKVLLWQ---SLEKPRAIALHPMEGTIYWTDWGN-------TPRIEASSMDGSG---RRIIADTHL 202 (349)
T ss_dssp TEEEEEETTSC--SCEEEECT---TCSCEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSCS---CEESCCSSC
T ss_pred CeEEEEcCCCC--ceEEEEeC---CCCCcceEEEecCcCeEEEeccCC-------CCEEEEEeCCCCC---cEEEEECCC
Confidence 88999999865 44444332 023345678999888888765422 1679999999865 455543 33
Q ss_pred CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCC
Q 006979 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (623)
Q Consensus 244 ~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g 323 (623)
....+.+|+|++++|+|+.+. ...|+++++++.. .+.++.... ..+..+.. .++.+| .++. +
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~-------~~~I~~~~~dG~~---~~~~~~~~~----~~P~giav-~~~~ly-~td~--~ 264 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAK-------HHVIERANLDGSH---RKAVISQGL----PHPFAITV-FEDSLY-WTDW--H 264 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCS---CEEEECSSC----SSEEEEEE-ETTEEE-EEET--T
T ss_pred CCcceEEEeCCCCEEEEEECC-------CCEEEEEeCCCCc---eEEEEeCCC----CCceEEEE-ECCEEE-EecC--C
Confidence 445677899999999998643 3469999988652 233333222 23344555 334344 4565 4
Q ss_pred eeeEEEEecCCCe
Q 006979 324 FWNLHKWIESNNE 336 (623)
Q Consensus 324 ~~~L~~~d~~~~~ 336 (623)
...|.+++..+|+
T Consensus 265 ~~~V~~~~~~~G~ 277 (349)
T 3v64_C 265 TKSINSANKFTGK 277 (349)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEEccCCC
Confidence 5578888854554
No 309
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=98.68 E-value=1.3e-07 Score=94.64 Aligned_cols=102 Identities=13% Similarity=0.054 Sum_probs=66.6
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHH-hCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLV-GSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~-~~~~~d~~ 574 (623)
|.||++||.+... ..|......++ .+|.|+++|+||.|.+.+.- ....+.....+++.+.+..++ ..+ .+
T Consensus 26 ~~~vllHG~~~~~--~~w~~~~~~l~-~~~~vi~~Dl~G~G~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~---~~ 96 (291)
T 3qyj_A 26 APLLLLHGYPQTH--VMWHKIAPLLA-NNFTVVATDLRGYGDSSRPA---SVPHHINYSKRVMAQDQVEVMSKLG---YE 96 (291)
T ss_dssp SEEEEECCTTCCG--GGGTTTHHHHT-TTSEEEEECCTTSTTSCCCC---CCGGGGGGSHHHHHHHHHHHHHHTT---CS
T ss_pred CeEEEECCCCCCH--HHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCC---CCccccccCHHHHHHHHHHHHHHcC---CC
Confidence 5688899996543 35555666664 58999999999966543210 000011122333333222222 222 35
Q ss_pred ceEEEEcChHHHHHHHHh-cCCCceeEEEeccc
Q 006979 575 RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYG 606 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g 606 (623)
++.++||||||.+++.++ .+|+++++.|...+
T Consensus 97 ~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (291)
T 3qyj_A 97 QFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129 (291)
T ss_dssp SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred CEEEEEEChHHHHHHHHHHhCchhccEEEEECC
Confidence 899999999999999998 89999999998754
No 310
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.68 E-value=8e-06 Score=82.57 Aligned_cols=230 Identities=10% Similarity=0.025 Sum_probs=135.9
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC----C
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG----Q 231 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~----g 231 (623)
.|+|+. ...|.++|++++ ....+... ..+...+.|+++++.|+++.... ..|+++++++ .
T Consensus 3 ~ll~~~--~~~I~~i~~~~~--~~~~~~~~----~~~p~g~~~d~~~~~ly~~D~~~--------~~I~~~~~~g~~~~~ 66 (316)
T 1ijq_A 3 YLFFTN--RHEVRKMTLDRS--EYTSLIPN----LRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVS 66 (316)
T ss_dssp EEEEEC--BSSEEEEETTSC--CCEEEECS----CSSEEEEEEETTTTEEEEEETTT--------TEEEEEEC-------
T ss_pred EEEEEC--CCeEEEEECCCc--ceEehhcC----CCceEEEEEEeCCCEEEEEECCC--------CcEEEEECCCCCCCc
Confidence 366764 345999999876 44444332 22345678999888888875432 6799999987 2
Q ss_pred Ccccceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC
Q 006979 232 NIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (623)
Q Consensus 232 ~~~~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~ 310 (623)
. .+.+. .+.....+.+++++++.|+|.... ...|.++++++.. ...++.... ..+...+.+|
T Consensus 67 ~---~~~~~~~~~~~p~glavd~~~~~ly~~d~~-------~~~I~~~~~~g~~---~~~~~~~~~----~~P~~iavdp 129 (316)
T 1ijq_A 67 S---YDTVISRDIQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVK---RKTLFRENG----SKPRAIVVDP 129 (316)
T ss_dssp ----CEEEECSSCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSSS---EEEEEECTT----CCEEEEEEET
T ss_pred c---cEEEEeCCCCCcCEEEEeecCCeEEEEECC-------CCEEEEEeCCCCc---eEEEEECCC----CCcceEEeCC
Confidence 2 23332 232334556788888889988632 3468899987652 233333222 3445677888
Q ss_pred CCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 311 KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 311 DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
++..+|.++. .....|+++++++...+.+... .+..| +.+.+. ++++.|||+. .+..+|+++|.++
T Consensus 130 ~~g~ly~~d~-~~~~~I~~~~~dG~~~~~~~~~--~~~~P------~gla~d---~~~~~lY~~D--~~~~~I~~~d~dg 195 (316)
T 1ijq_A 130 VHGFMYWTDW-GTPAKIKKGGLNGVDIYSLVTE--NIQWP------NGITLD---LLSGRLYWVD--SKLHSISSIDVNG 195 (316)
T ss_dssp TTTEEEEEEC-SSSCEEEEEETTSCCEEEEECS--SCSCE------EEEEEE---TTTTEEEEEE--TTTTEEEEEETTS
T ss_pred CCCEEEEEcc-CCCCeEEEEcCCCCCeEEEEEC--CCCCc------eEEEEe---ccCCEEEEEE--CCCCeEEEEecCC
Confidence 6664444555 2236899999877655555432 11111 233333 2678899876 3456799999987
Q ss_pred CceeecccC---CcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 391 HSLSLLDIP---FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 391 ~~~~~lt~~---~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
+..+.+... ...-.++..+++.+|++.. ....|++++..+++
T Consensus 196 ~~~~~~~~~~~~~~~P~giav~~~~ly~~d~---~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 240 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred CceEEEeecCCccCCcEEEEEECCEEEEEEC---CCCeEEEEeCCCCc
Confidence 766655321 1122344445677777552 23578888876554
No 311
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.68 E-value=1.2e-06 Score=92.70 Aligned_cols=206 Identities=10% Similarity=0.023 Sum_probs=118.5
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC--CEEEEEeCCCCc
Q 006979 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG--DTVIFSNYKDQR 166 (623)
Q Consensus 90 ~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~--d~l~f~~~~~~~ 166 (623)
.+..+.|+| ++.+.-.-. .+|...||..... .....+...+ |...+.+..+++ +.++++...|+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs---~dg~i~lWd~~~~--~~~~~~~~~g-------H~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS---KGGDIMLWNFGIK--DKPTFIKGIG-------AGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE---TTSCEEEECSSCC--SCCEEECCCS-------SSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred CEEEEEEeCCCCCEEEEEe---CCCEEEEEECCCC--CceeEEEccC-------CCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 355678888 555544432 2577777755433 1122111111 222355666663 357778778888
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcc
Q 006979 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFY 246 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~ 246 (623)
|.++|+.++ ..+.+.... ..........|+|+|+.|+....+ ..|.++|+.+.. +..+......+
T Consensus 189 v~iwd~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~d---------g~i~~wd~~~~~---~~~~~~h~~~v 253 (435)
T 4e54_B 189 TRLQDFKGN--ILRVFASSD-TINIWFCSLDVSASSRMVVTGDNV---------GNVILLNMDGKE---LWNLRMHKKKV 253 (435)
T ss_dssp EEEEETTSC--EEEEEECCS-SCSCCCCCEEEETTTTEEEEECSS---------SBEEEEESSSCB---CCCSBCCSSCE
T ss_pred EEEeeccCC--ceeEEeccC-CCCccEEEEEECCCCCEEEEEeCC---------CcEeeeccCcce---eEEEecccceE
Confidence 999999765 344433321 112234567899999988765433 458888988765 44454444556
Q ss_pred cceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeee
Q 006979 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 326 (623)
Q Consensus 247 ~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~ 326 (623)
....|+|+++.++.....+ ..|.++|+.............+.. ..+....|+|||++++.... ++.
T Consensus 254 ~~v~~~p~~~~~~~s~s~d-------~~v~iwd~~~~~~~~~~~~~~~h~----~~v~~~~~spdg~~l~s~~~-D~~-- 319 (435)
T 4e54_B 254 THVALNPCCDWFLATASVD-------QTVKIWDLRQVRGKASFLYSLPHR----HPVNAACFSPDGARLLTTDQ-KSE-- 319 (435)
T ss_dssp EEEEECTTCSSEEEEEETT-------SBCCEEETTTCCSSSCCSBCCBCS----SCEEECCBCTTSSEEEEEES-SSC--
T ss_pred EeeeecCCCceEEEEecCc-------ceeeEEecccccccceEEEeeecc----ccccceeECCCCCeeEEEcC-CCE--
Confidence 6788999998766555332 226677876653211111112222 35667889999995555444 454
Q ss_pred EEEEecCCCe
Q 006979 327 LHKWIESNNE 336 (623)
Q Consensus 327 L~~~d~~~~~ 336 (623)
|..+|..+++
T Consensus 320 i~iwd~~~~~ 329 (435)
T 4e54_B 320 IRVYSASQWD 329 (435)
T ss_dssp EEEEESSSSS
T ss_pred EEEEECCCCc
Confidence 4455665554
No 312
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.68 E-value=1.8e-08 Score=107.02 Aligned_cols=111 Identities=10% Similarity=-0.010 Sum_probs=78.6
Q ss_pred CCCCEEEEecCCCCCcccCcCCH-HhHHHHcC-ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNL-SIQYWTSR-GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~-~~~~~a~~-G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
...|+||++||.+... ...|.. .+..|.++ ||.|+++|+||.+... +..... +. ....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~--~~~~~~-~~-~~~~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAE--YTQAVQ-NI-RIVGAETAYLIQQLLTELS 142 (452)
T ss_dssp TTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC--HHHHHH-HH-HHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccc--cHHHHH-hH-HHHHHHHHHHHHHHHHhcC
Confidence 3458999999985433 123443 55667665 9999999999865543 211111 11 1235678888888875433
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.++|.|+|||+||++++.++ .+|++++.+|...|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 5678999999999999999999 7899999999887653
No 313
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.3e-06 Score=92.82 Aligned_cols=252 Identities=10% Similarity=-0.028 Sum_probs=138.7
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcE
Q 006979 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (623)
Q Consensus 90 ~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l 167 (623)
.+..+.|+| +..++.+... +|...+|.....++ +....+.. ..+...+.++.++++ ..+++...++.+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~---dg~v~iwd~~~~~~-~~~~~~~~------~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADS---DKSLLVFDVDKTSK-NVLKLRKR------FCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGG---GTEEEEEEECSSSS-SCEEEEEE------EECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceEEEEEcCCCCEEEEEECC---CCeEEEEECcCCCC-ceeeeeec------ccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 467889999 6655555533 47777887753222 23222210 001112345666665 445555568889
Q ss_pred EEEeCCCCCCCce-----ecCCCCCCCCeeecceeeCCC---CCEEEEEEeccCCCCCCceeEEEEEEcCCCCccccee-
Q 006979 168 YKHSIDSKDSSPL-----PITPDYGEPLVSYADGIFDPR---FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV- 238 (623)
Q Consensus 168 ~~~d~~~g~~~~~-----~Lt~~~~~~~~~~~d~~~sPd---G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~- 238 (623)
+.+++.++ ... .+... ........|+|+ +++|+....+ ..|+++|+.++.. +..
T Consensus 174 ~~~~~~~~--~~~~~~~~~~~~h----~~~v~~~~~sp~~~~~~~l~s~~~d---------~~i~vwd~~~~~~--~~~~ 236 (450)
T 2vdu_B 174 YSIDINSI--PEEKFTQEPILGH----VSMLTDVHLIKDSDGHQFIITSDRD---------EHIKISHYPQCFI--VDKW 236 (450)
T ss_dssp EEEETTSC--CCSSCCCCCSEEC----SSCEEEEEEEECTTSCEEEEEEETT---------SCEEEEEESCTTC--EEEE
T ss_pred EEEecCCc--ccccccceeeecc----cCceEEEEEcCCCCCCcEEEEEcCC---------CcEEEEECCCCce--eeee
Confidence 99999765 222 22211 234567889999 8777665543 4588889887762 233
Q ss_pred cccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCC---------------------CC
Q 006979 239 LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF---------------------DP 297 (623)
Q Consensus 239 l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~---------------------~~ 297 (623)
+......+....|| ||++|+....+ ..|.++|+.++.. ...+... ..
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d--------~~v~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGD--------DKIFAWDWKTGKN---LSTFDYNSLIKPYLNDQHLAPPRFQNENND 304 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESS--------SEEEEEETTTCCE---EEEEECHHHHGGGCCTTSBC----------
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCC--------CeEEEEECCCCcE---eeeecchhhhhhhhhhcccccccccccccc
Confidence 32334556778999 99998876633 3588889887642 1111100 00
Q ss_pred CccccCcCceeCCCCcEEEEEeCCCCeeeEEEE-ecCCCeEEEEe--ecccccccccccccCcceeEEeecCCCCEEEEE
Q 006979 298 TIVESPTEPKWSSKGELFFVTDRKNGFWNLHKW-IESNNEVLAIY--SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACS 374 (623)
Q Consensus 298 ~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~-d~~~~~~~~l~--~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~ 374 (623)
.....+..+.|+|||+++++.....+.-.||.+ +..+++.+.+. .....+. .+.+. . +.++++
T Consensus 305 ~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~---------~~~~~----~-~~~~v~ 370 (450)
T 2vdu_B 305 IIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVI---------SLSAH----N-DEFQVT 370 (450)
T ss_dssp CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEE---------EEEEE----T-TEEEEE
T ss_pred cceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceE---------EEEec----C-CcEEEE
Confidence 111345678999999955554421465556655 22333333332 2212222 23343 3 344444
Q ss_pred EEE-C------CeEEEEEEeCCCCcee
Q 006979 375 YRQ-N------GRSYLGILDDFGHSLS 394 (623)
Q Consensus 375 ~~~-~------g~~~L~~~d~~~~~~~ 394 (623)
... + ..-.||.++.++++++
T Consensus 371 ~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 371 LDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp ECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred EecccCCCCCCcceEEEEEEcCCCeEE
Confidence 432 1 1248888888777664
No 314
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.67 E-value=1e-05 Score=82.66 Aligned_cols=198 Identities=10% Similarity=-0.040 Sum_probs=114.7
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCC--cccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP--SDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 90 ~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~--~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
.+..+.|+| +..+.- -. .++...||..... .. ...+..+ |...+.+.+++++ ..+++...++
T Consensus 18 ~v~~l~~sp~g~~las-~~---~D~~i~iw~~~~~---~~~~~~~~~~~-------h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLAS-CG---GDRRIRIWGTEGD---SWICKSVLSEG-------HQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEECTTSSCEEE-EE---TTSCEEEEEEETT---EEEEEEEECSS-------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEEEECCCCCEEEE-Ec---CCCeEEEEEcCCC---cceeeeeeccc-------cCCcEEEEEECCCCCEEEEEECCC
Confidence 345678888 554443 22 2477777765422 11 1111111 2222445666665 5566666778
Q ss_pred cEEEEeCCCCCCCc---eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc-ccceeccc
Q 006979 166 RLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-QEPKVLVS 241 (623)
Q Consensus 166 ~l~~~d~~~g~~~~---~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~-~~~~~l~~ 241 (623)
.+.++++..+ .. ..+... ........|+|+|++|+....+ ..|.+.|+.++.. .....+..
T Consensus 84 ~v~iw~~~~~--~~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~s~D---------~~v~iwd~~~~~~~~~~~~~~~ 148 (345)
T 3fm0_A 84 TTCIWKKNQD--DFECVTTLEGH----ENEVKSVAWAPSGNLLATCSRD---------KSVWVWEVDEEDEYECVSVLNS 148 (345)
T ss_dssp CEEEEEECCC---EEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEEECTTSCEEEEEEECC
T ss_pred cEEEEEccCC--CeEEEEEccCC----CCCceEEEEeCCCCEEEEEECC---------CeEEEEECCCCCCeEEEEEecC
Confidence 8888887654 22 223322 3346778999999988876654 3477778776531 00122333
Q ss_pred CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCC
Q 006979 242 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRK 321 (623)
Q Consensus 242 ~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~ 321 (623)
....+....|+|||+.|+....|. .|.+++...+.. .....+.+.. ..+....|+|||++++....
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s~d~--------~i~~w~~~~~~~-~~~~~~~~h~----~~v~~l~~sp~g~~l~s~s~- 214 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASASYDD--------TVKLYREEEDDW-VCCATLEGHE----STVWSLAFDPSGQRLASCSD- 214 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEETTS--------CEEEEEEETTEE-EEEEEECCCS----SCEEEEEECTTSSEEEEEET-
T ss_pred cCCCeEEEEECCCCCEEEEEeCCC--------cEEEEEecCCCE-EEEEEecCCC----CceEEEEECCCCCEEEEEeC-
Confidence 334456678999999888776443 267777766521 1122344444 46778899999995555544
Q ss_pred CCeeeEEEE
Q 006979 322 NGFWNLHKW 330 (623)
Q Consensus 322 ~g~~~L~~~ 330 (623)
++.-+||..
T Consensus 215 D~~v~iW~~ 223 (345)
T 3fm0_A 215 DRTVRIWRQ 223 (345)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEecc
Confidence 577777754
No 315
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.67 E-value=9.4e-07 Score=92.27 Aligned_cols=295 Identities=12% Similarity=0.006 Sum_probs=152.5
Q ss_pred ccCceEEcC-CCcEEEEeec-C------CCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEE
Q 006979 90 RLGGTAVDG-HGRLIWLESR-P------TEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFS 160 (623)
Q Consensus 90 ~~~~~~~~~-~~~~~~l~~~-~------~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~ 160 (623)
.+..+.|+| +..++..-.. + .+++...+|..... ...+.+.... +...+.+..++++ .++++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~--~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~ 84 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAA--DSEKPIASLQ-------VDSKFNDLDWSHNNKIIAG 84 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSG--GGCSCSCCCC-------CSSCEEEEEECSSSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCC--CCCcEEEEEe-------cCCceEEEEECCCCCeEEE
Confidence 355678888 5545555422 1 34577777766533 1111111000 1122445666655 44555
Q ss_pred eCCCCcEEEEeCCC---CCCCceecCCCCCCCCeeecceeeCCC-CCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc--
Q 006979 161 NYKDQRLYKHSIDS---KDSSPLPITPDYGEPLVSYADGIFDPR-FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-- 234 (623)
Q Consensus 161 ~~~~~~l~~~d~~~---g~~~~~~Lt~~~~~~~~~~~d~~~sPd-G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~-- 234 (623)
...++.|.++++.+ +......+... ........|+|+ ++.|+....+ ..|.++|+.+++..
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNH----SSSVKTVKFNAKQDNVLASGGNN---------GEIFIWDMNKCTESPS 151 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCS----SSCCCEEEECSSSTTBEEEECSS---------SCEEBCBTTTTSSCTT
T ss_pred EccCCeEEEeecccccccccchhhccCC----ccceEEEEEcCCCCCEEEEEcCC---------CeEEEEECCCCccccc
Confidence 55678899999876 20122333322 334667889998 6665554332 45888898876400
Q ss_pred --cceec---ccCCCcccceeeCCC-CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCC--CccccCcCc
Q 006979 235 --EPKVL---VSGSDFYAFPRMDPR-GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP--TIVESPTEP 306 (623)
Q Consensus 235 --~~~~l---~~~~~~~~~p~wSPD-G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 306 (623)
....+ ...........|+|| ++.|+... . ...|.++|+..+. ....+..... .....+..+
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~-------dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-S-------SNFASIWDLKAKK---EVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-S-------SSCEEEEETTTTE---EEEEECCCCCSSCCCCCEEEE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEc-C-------CCCEEEEECCCCC---cceEEeccccccccCCceEEE
Confidence 01112 222344566889999 45554333 2 2238888988762 2233332210 000456788
Q ss_pred eeCCCCc-EEEEEeCCCC-eeeEEEEecCCCe-E-EEEe-ecccccccccccccCcceeEEeecCCCCEEEEEEEECCeE
Q 006979 307 KWSSKGE-LFFVTDRKNG-FWNLHKWIESNNE-V-LAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (623)
Q Consensus 307 ~ws~DG~-l~~~~~~~~g-~~~L~~~d~~~~~-~-~~l~-~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~ 381 (623)
.|+|+|. +++.... ++ ...|..+|..+++ . +.+. .....+....|. |+++.++++...+|.
T Consensus 221 ~~~~~~~~~l~~~~~-d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s------------~~~~~~l~s~~~dg~- 286 (416)
T 2pm9_A 221 EWHPKNSTRVATATG-SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWC------------HQDEHLLLSSGRDNT- 286 (416)
T ss_dssp EECSSCTTEEEEEEC-CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEEC------------SSCSSCEEEEESSSE-
T ss_pred EECCCCCCEEEEEEC-CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeC------------CCCCCeEEEEeCCCC-
Confidence 9999986 6665554 33 2256666776642 1 2221 122222222232 234455556656665
Q ss_pred EEEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 382 YLGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 382 ~L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
|.++|+.+++. ..+......+..+ ++++..++++++. ...|..+++..++
T Consensus 287 -v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 287 -VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF---DNKIEVQTLQNLT 339 (416)
T ss_dssp -EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS---SSEEEEEESCCCC
T ss_pred -EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec---CCcEEEEEccCCC
Confidence 44557666554 3444433344444 5666445555443 2457777777654
No 316
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.67 E-value=2.5e-06 Score=88.99 Aligned_cols=189 Identities=12% Similarity=0.152 Sum_probs=118.1
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~ 233 (623)
.+.|||++...++|++++++++ ..+.+.... .......++++.++.|+++.... ..|+++++++..
T Consensus 127 ~~~ly~~D~~~~~I~r~~~~g~--~~~~~~~~~---~~~p~glavd~~~g~lY~~d~~~--------~~I~~~~~dg~~- 192 (386)
T 3v65_B 127 RELVFWSDVTLDRILRANLNGS--NVEEVVSTG---LESPGGLAVDWVHDKLYWTDSGT--------SRIEVANLDGAH- 192 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTSC--CEEEEECSS---CSCCCCEEEETTTTEEEEEETTT--------TEEEECBTTSCS-
T ss_pred CCeEEEEeCCCCcEEEEecCCC--CcEEEEeCC---CCCccEEEEEeCCCeEEEEcCCC--------CeEEEEeCCCCc-
Confidence 4589999888889999999875 444432210 12234577888888887764422 579999998765
Q ss_pred ccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCC
Q 006979 234 QEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (623)
Q Consensus 234 ~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG 312 (623)
.+.+.. +.......++.|++.+|+|..+.. ...|+++++++.. ...+....- ..+..++|++++
T Consensus 193 --~~~l~~~~l~~P~giavdp~~g~ly~td~~~------~~~I~r~~~dG~~---~~~~~~~~~----~~PnGlavd~~~ 257 (386)
T 3v65_B 193 --RKVLLWQSLEKPRAIALHPMEGTIYWTDWGN------TPRIEASSMDGSG---RRIIADTHL----FWPNGLTIDYAG 257 (386)
T ss_dssp --CEEEECSSCSCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCS---CEEEECSSC----SCEEEEEEEGGG
T ss_pred --eEEeecCCCCCCcEEEEEcCCCeEEEeccCC------CCEEEEEeCCCCC---cEEEEECCC----CCeeeEEEeCCC
Confidence 444433 333445567999999999987543 2569999988752 223332222 345678999877
Q ss_pred cEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeC
Q 006979 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (623)
Q Consensus 313 ~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~ 388 (623)
+.+|+++. +...|+++|+++...+.+.... ...| ..+.+ +++.+||+.. +...|.+++.
T Consensus 258 ~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~--~~~P------~giav-----~~~~ly~td~--~~~~V~~~~~ 316 (386)
T 3v65_B 258 RRMYWVDA--KHHVIERANLDGSHRKAVISQG--LPHP------FAITV-----FEDSLYWTDW--HTKSINSANK 316 (386)
T ss_dssp TEEEEEET--TTTEEEEECTTSCSCEEEECSS--CSSE------EEEEE-----ETTEEEEEET--TTTEEEEEET
T ss_pred CEEEEEEC--CCCEEEEEeCCCCeeEEEEECC--CCCc------eEEEE-----ECCEEEEeeC--CCCeEEEEEC
Confidence 74445565 4458999998776555554321 1111 22333 3457777653 3446777774
No 317
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.66 E-value=3.2e-06 Score=88.34 Aligned_cols=240 Identities=6% Similarity=-0.021 Sum_probs=141.2
Q ss_pred ceEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 148 ~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
..+.++++.++... .++.|+++++.++ ....+... ..........|+|+|+.|+....+ ..|.++|
T Consensus 97 ~~~~~s~~~l~~~~-~d~~v~lw~~~~~--~~~~~~~~--~~~~~v~~v~~s~~~~~l~~~~~d---------g~i~iwd 162 (401)
T 4aez_A 97 NLLDWSNLNVVAVA-LERNVYVWNADSG--SVSALAET--DESTYVASVKWSHDGSFLSVGLGN---------GLVDIYD 162 (401)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTC--CEEEEEEC--CTTCCEEEEEECTTSSEEEEEETT---------SCEEEEE
T ss_pred EEEeecCCCEEEEE-CCCeEEEeeCCCC--cEeEeeec--CCCCCEEEEEECCCCCEEEEECCC---------CeEEEEE
Confidence 45666666554443 6778999999887 44333221 013346678999999988876654 4588889
Q ss_pred cCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce
Q 006979 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (623)
+.+++. .+.+......+....| +++.|+.... ...|.++|+...+. ....+.+.. ..+....
T Consensus 163 ~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~--------dg~i~i~d~~~~~~--~~~~~~~~~----~~v~~~~ 224 (401)
T 4aez_A 163 VESQTK--LRTMAGHQARVGCLSW--NRHVLSSGSR--------SGAIHHHDVRIANH--QIGTLQGHS----SEVCGLA 224 (401)
T ss_dssp TTTCCE--EEEECCCSSCEEEEEE--ETTEEEEEET--------TSEEEEEETTSSSC--EEEEEECCS----SCEEEEE
T ss_pred CcCCeE--EEEecCCCCceEEEEE--CCCEEEEEcC--------CCCEEEEecccCcc--eeeEEcCCC----CCeeEEE
Confidence 988762 3444433344455667 6677765542 23588889875432 333444444 5677889
Q ss_pred eCCCCcEEEEEeCCCCeeeEEEEecCCCeEEE-EeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 308 ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
|+|||++++.... ++ .|..+|+.+++... +......+....|.+ +++.++++........|.++
T Consensus 225 ~~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p------------~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 225 WRSDGLQLASGGN-DN--VVQIWDARSSIPKFTKTNHNAAVKAVAWCP------------WQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp ECTTSSEEEEEET-TS--CEEEEETTCSSEEEEECCCSSCCCEEEECT------------TSTTEEEEECCTTTCEEEEE
T ss_pred EcCCCCEEEEEeC-CC--eEEEccCCCCCccEEecCCcceEEEEEECC------------CCCCEEEEecCCCCCEEEEE
Confidence 9999985555544 34 46666777765433 333333333344443 66677776542123456667
Q ss_pred eCCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 387 DDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 387 d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
|+.+++....-.....+..+ ++++..++...... ...++.+++.+++.
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~--dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP--DNNLSIWSYSSSGL 339 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT--TCEEEEEEEETTEE
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC--CCcEEEEecCCccc
Confidence 87776654322233345555 66777666554322 24677777776653
No 318
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.66 E-value=1.1e-07 Score=95.04 Aligned_cols=101 Identities=14% Similarity=0.035 Sum_probs=73.2
Q ss_pred CCCEEEEecCCCCCcccCcCC-HHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKAD 572 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~-~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 572 (623)
..+.||++||..... ...|. ....+|.++||.|+.+|++|.|.... ....+++.+.++++.++- .
T Consensus 64 ~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~-----------~~~~~~la~~I~~l~~~~--g 129 (316)
T 3icv_A 64 VSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT-----------QVNTEYMVNAITTLYAGS--G 129 (316)
T ss_dssp CSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH-----------HHHHHHHHHHHHHHHHHT--T
T ss_pred CCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH-----------HHHHHHHHHHHHHHHHHh--C
Confidence 345688899984322 13455 67889999999999999998542111 112467777788777652 2
Q ss_pred CCceEEEEcChHHHHHHHHh-cC---CCceeEEEecccCC
Q 006979 573 EKRLCITGGSAGGYTTLAAL-AF---RDTFKAGASLYGVS 608 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~-~~---~~~f~a~v~~~g~~ 608 (623)
.++|.|+||||||.++.+++ .+ +++++..|.+++..
T Consensus 130 ~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 130 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCC
Confidence 37999999999999998877 43 58999999988764
No 319
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.66 E-value=4.3e-06 Score=84.55 Aligned_cols=196 Identities=11% Similarity=0.057 Sum_probs=116.3
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCC--CCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~--~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g 231 (623)
.+.|||++...+.|+++++++.. ...+.+.... .......++++.++.|+++.... ..|.++++++.
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~---~~~p~glavd~~~~~ly~~d~~~--------~~I~~~~~~g~ 109 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---IQAPDGLAVDWIHSNIYWTDSVL--------GTVSVADTKGV 109 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSS---CSCCCEEEEETTTTEEEEEETTT--------TEEEEEETTSS
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC---CCCcCEEEEeecCCeEEEEECCC--------CEEEEEeCCCC
Confidence 45899999888899999998610 1233332210 12234567888777777764422 57999999876
Q ss_pred Ccccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC
Q 006979 232 NIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (623)
Q Consensus 232 ~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~ 310 (623)
. .+.+.. +.......+..|++++|+|..+.. ...|+++++++.. ...+....- ..+..++|++
T Consensus 110 ~---~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------~~~I~~~~~dG~~---~~~~~~~~~----~~P~gla~d~ 173 (316)
T 1ijq_A 110 K---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVD---IYSLVTENI----QWPNGITLDL 173 (316)
T ss_dssp S---EEEEEECTTCCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCC---EEEEECSSC----SCEEEEEEET
T ss_pred c---eEEEEECCCCCcceEEeCCCCCEEEEEccCC------CCeEEEEcCCCCC---eEEEEECCC----CCceEEEEec
Confidence 5 444443 333344567999999999987542 2469999987652 222222221 3456788998
Q ss_pred CCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 311 KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 311 DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
+++.+|.++. +...|+++|.++...+.+.........| ..+.+ +++.+||+. .+..+|++++..+
T Consensus 174 ~~~~lY~~D~--~~~~I~~~d~dg~~~~~~~~~~~~~~~P------~giav-----~~~~ly~~d--~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 174 LSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP------FSLAV-----FEDKVFWTD--IINEAIFSANRLT 238 (316)
T ss_dssp TTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSE------EEEEE-----ETTEEEEEE--TTTTEEEEEETTT
T ss_pred cCCEEEEEEC--CCCeEEEEecCCCceEEEeecCCccCCc------EEEEE-----ECCEEEEEE--CCCCeEEEEeCCC
Confidence 8774445565 4557999999876555554321111111 12333 456777765 3445677787644
Q ss_pred C
Q 006979 391 H 391 (623)
Q Consensus 391 ~ 391 (623)
+
T Consensus 239 g 239 (316)
T 1ijq_A 239 G 239 (316)
T ss_dssp C
T ss_pred C
Confidence 4
No 320
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.66 E-value=7.9e-06 Score=85.78 Aligned_cols=261 Identities=9% Similarity=0.019 Sum_probs=145.3
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcE
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l 167 (623)
..+..+.|+|.+.+...-.. +|...+|..... +....+.. |.-.+.+..++++ .++++...++.|
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~---Dg~i~vwd~~~~---~~~~~l~~--------h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASE---DATIKVWDYETG---DFERTLKG--------HTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEEEEECSSSSEEEEEES---SSCEEEEETTTC---CCCEEECC--------CSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred CcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCC---cEEEEEec--------cCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 34567788883334333322 477777765432 22222211 1112345555554 566777788889
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCccc
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYA 247 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~ 247 (623)
.++|+.++ ...+.+... ........|+|+|++|+....+ ..+.++|+.++.. +..+......+.
T Consensus 175 ~iwd~~~~-~~~~~~~~h----~~~V~~v~~~p~~~~l~s~s~D---------~~i~~wd~~~~~~--~~~~~~h~~~v~ 238 (410)
T 1vyh_C 175 KLWDFQGF-ECIRTMHGH----DHNVSSVSIMPNGDHIVSASRD---------KTIKMWEVQTGYC--VKTFTGHREWVR 238 (410)
T ss_dssp CEEETTSS-CEEECCCCC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCCE--EEEEECCSSCEE
T ss_pred EEEeCCCC-ceeEEEcCC----CCCEEEEEEeCCCCEEEEEeCC---------CeEEEEECCCCcE--EEEEeCCCccEE
Confidence 99999865 222333322 3346678899999988766544 5688999988762 334444445566
Q ss_pred ceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCC----------------
Q 006979 248 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK---------------- 311 (623)
Q Consensus 248 ~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~D---------------- 311 (623)
...|+|||+.|+-...|. .|.++|+..+. ....+.+.. ..+....|+|+
T Consensus 239 ~~~~~~~g~~l~s~s~D~--------~v~vwd~~~~~---~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (410)
T 1vyh_C 239 MVRPNQDGTLIASCSNDQ--------TVRVWVVATKE---CKAELREHR----HVVECISWAPESSYSSISEATGSETKK 303 (410)
T ss_dssp EEEECTTSSEEEEEETTS--------CEEEEETTTCC---EEEEECCCS----SCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred EEEECCCCCEEEEEcCCC--------eEEEEECCCCc---eeeEecCCC----ceEEEEEEcCcccccchhhhccccccc
Confidence 678999999887665332 27777887663 233344433 44566778876
Q ss_pred ----CcEEEEEeCCCCeeeEEEEecCCCeEEE-EeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 312 ----GELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 312 ----G~l~~~~~~~~g~~~L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
|.+++.... ++ .|..+|..+++... +......+.. +.|. ++++.| ++...++.-++|
T Consensus 304 ~~~~g~~l~sgs~-D~--~i~iwd~~~~~~~~~~~~h~~~v~~---------v~~~---~~g~~l-~s~s~D~~i~vw-- 365 (410)
T 1vyh_C 304 SGKPGPFLLSGSR-DK--TIKMWDVSTGMCLMTLVGHDNWVRG---------VLFH---SGGKFI-LSCADDKTLRVW-- 365 (410)
T ss_dssp ----CCEEEEEET-TS--EEEEEETTTTEEEEEEECCSSCEEE---------EEEC---SSSSCE-EEEETTTEEEEE--
T ss_pred cCCCCCEEEEEeC-CC--eEEEEECCCCceEEEEECCCCcEEE---------EEEc---CCCCEE-EEEeCCCeEEEE--
Confidence 444444443 34 46667777775432 3222222222 2332 255544 455566765555
Q ss_pred eCCCCc-eeecccCCcceEee--eecCCE
Q 006979 387 DDFGHS-LSLLDIPFTDIDNI--TLGNDC 412 (623)
Q Consensus 387 d~~~~~-~~~lt~~~~~v~~~--~~~~~~ 412 (623)
|..+++ +..+......+..+ ++++..
T Consensus 366 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 (410)
T ss_dssp CCTTSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred ECCCCceEEEEcCCCCcEEEEEEcCCCCE
Confidence 655544 34454444445554 444443
No 321
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.65 E-value=9e-07 Score=91.51 Aligned_cols=198 Identities=9% Similarity=-0.080 Sum_probs=116.1
Q ss_pred eEEEeCC--EEEE-EeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 149 AFRIFGD--TVIF-SNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 149 ~~~~s~d--~l~f-~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
..++++| .+++ +...++.|.++|+.++ .....+.. .....+..|||||++++.... ..+.+
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~-~~~~~~~~-----~~~V~~v~fspdg~~l~s~s~----------~~~~~ 201 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDL-TEKFEIET-----RGEVKDLHFSTDGKVVAYITG----------SSLEV 201 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTT-EEEEEEEC-----SSCCCEEEECTTSSEEEEECS----------SCEEE
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCC-cEEEEeCC-----CCceEEEEEccCCceEEeccc----------eeEEE
Confidence 3455665 3433 3335677999999876 22233332 234678899999998887653 23677
Q ss_pred EEcCCCCcccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCc-eeeeEEEcCCCCCccccC
Q 006979 226 IALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 226 idl~~g~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~-~~~~~~~~~~~~~~~~~~ 303 (623)
++..++... .+.... ....+...+|||||+.|+....+.. ....++..++..... ......+.+.. ..+
T Consensus 202 ~~~~~~~~~-~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~V 272 (365)
T 4h5i_A 202 ISTVTGSCI-ARKTDFDKNWSLSKINFIADDTVLIAASLKKG----KGIVLTKISIKSGNTSVLRSKQVTNRF----KGI 272 (365)
T ss_dssp EETTTCCEE-EEECCCCTTEEEEEEEEEETTEEEEEEEESSS----CCEEEEEEEEETTEEEEEEEEEEESSC----SCE
T ss_pred EEeccCcce-eeeecCCCCCCEEEEEEcCCCCEEEEEecCCc----ceeEEeecccccceecceeeeeecCCC----CCe
Confidence 777766510 111222 2233556789999999988775543 244577777765522 11222334433 456
Q ss_pred cCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE-EEee-cccccccccccccCcceeEEeecCCCCEEEEEEEECCeE
Q 006979 304 TEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~ 381 (623)
....|+|||+++..... ++. |..+|..+++.. .+.. ....+....|+ ||++. +++...++.-
T Consensus 273 ~~~~~Spdg~~lasgs~-D~~--V~iwd~~~~~~~~~~~~gH~~~V~~v~fS------------pdg~~-laS~S~D~tv 336 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASN-DNS--IALVKLKDLSMSKIFKQAHSFAITEVTIS------------PDSTY-VASVSAANTI 336 (365)
T ss_dssp EEEEECTTSCEEEEEET-TSC--EEEEETTTTEEEEEETTSSSSCEEEEEEC------------TTSCE-EEEEETTSEE
T ss_pred EeEEECCCCCceEEEcC-CCE--EEEEECCCCcEEEEecCcccCCEEEEEEC------------CCCCE-EEEEeCCCeE
Confidence 67899999995555444 343 556687777643 2322 22233333333 26654 4566678888
Q ss_pred EEEEEe
Q 006979 382 YLGILD 387 (623)
Q Consensus 382 ~L~~~d 387 (623)
+||.+.
T Consensus 337 rvw~ip 342 (365)
T 4h5i_A 337 HIIKLP 342 (365)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 887664
No 322
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.65 E-value=2.7e-06 Score=97.40 Aligned_cols=263 Identities=11% Similarity=0.053 Sum_probs=146.8
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.|+| +..+.... .+|...+|....+ .....+.. |...+.+..++++ ..+++...++
T Consensus 13 ~~~v~~i~~sp~~~~la~~~----~~g~v~iwd~~~~--~~~~~~~~---------~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTL----YSGRVEIWNYETQ--VEVRSIQV---------TETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT--EEEEEEEC---------CSSCEEEEEEEGGGTEEEEEETTS
T ss_pred CCceEEEEECCCCCEEEEEe----CCCEEEEEECCCC--ceEEEEec---------CCCcEEEEEEeCCCCEEEEEeCCC
Confidence 45677899999 55554432 2467667754322 11122111 1112345555555 3344444678
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCc
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~ 245 (623)
.|.++++.++ .....+... ........|+|+|++|+....+ ..+.++|+.++.. ....+......
T Consensus 78 ~i~vw~~~~~-~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~vw~~~~~~~-~~~~~~~~~~~ 142 (814)
T 3mkq_A 78 RIRVFNYNTG-EKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWENNWA-LEQTFEGHEHF 142 (814)
T ss_dssp EEEEEETTTC-CEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEEGGGTSE-EEEEEECCSSC
T ss_pred eEEEEECCCC-cEEEEEecC----CCCEEEEEEeCCCCEEEEEcCC---------CEEEEEECCCCce-EEEEEcCCCCc
Confidence 8999999876 233444432 3446678899999988866543 5688889877631 02333334445
Q ss_pred ccceeeCC-CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC--CCcEEEEEeCCC
Q 006979 246 YAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKN 322 (623)
Q Consensus 246 ~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~--DG~l~~~~~~~~ 322 (623)
.....|+| ||+.|+....+ ..|.++|+..+.. ......... ..+..+.|+| ||.+++.... +
T Consensus 143 v~~~~~~p~~~~~l~~~~~d--------g~v~vwd~~~~~~--~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~~-d 207 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLD--------RTVKVWSLGQSTP--NFTLTTGQE----RGVNYVDYYPLPDKPYMITASD-D 207 (814)
T ss_dssp EEEEEEETTEEEEEEEEETT--------SEEEEEETTCSSC--SEEEECCCT----TCCCEEEECCSTTCCEEEEECT-T
T ss_pred EEEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCcc--eeEEecCCC----CCEEEEEEEECCCCCEEEEEeC-C
Confidence 66688999 88877766533 3488889876532 222333332 4567889998 8875555544 3
Q ss_pred CeeeEEEEecCCCeEEE-EeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccCC
Q 006979 323 GFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPF 400 (623)
Q Consensus 323 g~~~L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~~ 400 (623)
+ .|..+|..+++... +......+....|. |+++.++ +...+|. |.++|..+++.. .+....
T Consensus 208 g--~i~~~d~~~~~~~~~~~~~~~~v~~~~~~------------~~~~~l~-~~~~dg~--v~vwd~~~~~~~~~~~~~~ 270 (814)
T 3mkq_A 208 L--TIKIWDYQTKSCVATLEGHMSNVSFAVFH------------PTLPIII-SGSEDGT--LKIWNSSTYKVEKTLNVGL 270 (814)
T ss_dssp S--EEEEEETTTTEEEEEEECCSSCEEEEEEC------------SSSSEEE-EEETTSC--EEEEETTTCSEEEEECCSS
T ss_pred C--EEEEEECCCCcEEEEEcCCCCCEEEEEEc------------CCCCEEE-EEeCCCe--EEEEECCCCcEEEEeecCC
Confidence 4 46666777766433 32222233333333 2666444 4444565 444577665543 344333
Q ss_pred cceEee--eecCCE
Q 006979 401 TDIDNI--TLGNDC 412 (623)
Q Consensus 401 ~~v~~~--~~~~~~ 412 (623)
..+..+ ++++..
T Consensus 271 ~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 271 ERSWCIATHPTGRK 284 (814)
T ss_dssp SSEEEEEECTTCGG
T ss_pred CcEEEEEEccCCCc
Confidence 334443 444443
No 323
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.64 E-value=3.1e-07 Score=96.32 Aligned_cols=119 Identities=15% Similarity=0.042 Sum_probs=81.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHc------CceEEEEECCCCCCCCchhHHH
Q 006979 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS------RGWAFVDVNYGGSTGYGREFRE 544 (623)
Q Consensus 471 dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~------~G~~v~~~d~rGs~~~g~~~~~ 544 (623)
+|..|+.....+.+ ...|.||++||.+.+. ..|...+..|++ .||.|+++|+||.|.+...-
T Consensus 93 ~g~~i~~~~~~~~~--------~~~~pllllHG~~~s~--~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~-- 160 (408)
T 3g02_A 93 EGLTIHFAALFSER--------EDAVPIALLHGWPGSF--VEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP-- 160 (408)
T ss_dssp TTEEEEEEEECCSC--------TTCEEEEEECCSSCCG--GGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSC--
T ss_pred CCEEEEEEEecCCC--------CCCCeEEEECCCCCcH--HHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCC--
Confidence 68999977766543 2235688899996543 356677778887 59999999999976544321
Q ss_pred hhccCCccchHHHHHHHHHHHHhCCCCCCC-ceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 545 RLLGRWGIVDVNDCCSCATFLVGSGKADEK-RLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 545 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~-rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
... ....+++.+.+..+.++ ...+ ++.++|||+||++++.++ .+|++....+...++
T Consensus 161 -~~~---~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 -LDK---DFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp -SSS---CCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred -CCC---CCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 011 22355666555555443 1234 899999999999999988 788877666665443
No 324
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.64 E-value=9.5e-06 Score=81.91 Aligned_cols=205 Identities=13% Similarity=0.096 Sum_probs=119.7
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccce-eeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRT-TAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~-~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
..+..+.++| ++.+...-.. ++...+|..... ....-.+ .+. .-|...+.+..++++ ..+++...|+
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~---D~~v~~W~~~~~---~~~~~~~----~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASR---DKTLISWKLTGD---DQKFGVP----VRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEET---TSEEEEEEEEEE---TTEEEEE----EEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEEccCCCccEEEEecC---CccEEEecCCCC---Ccccccc----ceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 3455677887 5455555443 477777765422 1100000 000 012222345556655 5666777888
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCc
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~ 245 (623)
.|.++|+.++ ...+.+... ........|+|+++.|+....| ..+.+.|+.+.. ...+....+.
T Consensus 88 ~v~~wd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D---------~~i~vwd~~~~~---~~~~~~h~~~ 150 (319)
T 3frx_A 88 TLRLWDVATG-ETYQRFVGH----KSDVMSVDIDKKASMIISGSRD---------KTIKVWTIKGQC---LATLLGHNDW 150 (319)
T ss_dssp EEEEEETTTT-EEEEEEECC----SSCEEEEEECTTSCEEEEEETT---------SCEEEEETTSCE---EEEECCCSSC
T ss_pred EEEEEECCCC-CeeEEEccC----CCcEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCe---EEEEeccCCc
Confidence 8999999876 223334332 2345678899999988776554 347777887654 4555544455
Q ss_pred ccceeeCCC------CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEe
Q 006979 246 YAFPRMDPR------GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 319 (623)
Q Consensus 246 ~~~p~wSPD------G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~ 319 (623)
+....|+|+ +..|+-...+. .|.+.|+.... ....+.+.. ..+....|+|||++++...
T Consensus 151 v~~~~~~~~~~~~~~~~~l~s~~~d~--------~i~~wd~~~~~---~~~~~~~h~----~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 151 VSQVRVVPNEKADDDSVTIISAGNDK--------MVKAWNLNQFQ---IEADFIGHN----SNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEEEEECCC------CCEEEEEETTS--------CEEEEETTTTE---EEEEECCCC----SCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEccCCCCCCCccEEEEEeCCC--------EEEEEECCcch---hheeecCCC----CcEEEEEEcCCCCEEEEEe
Confidence 566778885 44565444332 37788887652 333444544 4567889999999655554
Q ss_pred CCCCeeeEEEEecCCCeEE
Q 006979 320 RKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 320 ~~~g~~~L~~~d~~~~~~~ 338 (623)
. ++. |..+|..+++..
T Consensus 216 ~-dg~--i~iwd~~~~~~~ 231 (319)
T 3frx_A 216 K-DGE--IMLWNLAAKKAM 231 (319)
T ss_dssp T-TCE--EEEEETTTTEEE
T ss_pred C-CCe--EEEEECCCCcEE
Confidence 4 454 555677776643
No 325
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.64 E-value=2.9e-06 Score=89.16 Aligned_cols=249 Identities=11% Similarity=0.048 Sum_probs=140.2
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ .++++...++.|.++|+.++ ...+.+... ........|+|+|+.|+....| ..|.+
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~-~~~~~l~~h----~~~V~~v~~~~~~~~l~sgs~D---------~~i~i 176 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGH----TDSVQDISFDHSGKLLASCSAD---------MTIKL 176 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTC-CCCEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCCCE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEEecc----CCcEEEEEEcCCCCEEEEEeCC---------CeEEE
Confidence 445666665 56777778889999999877 334445432 3346778899999987766554 34677
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+.+++. .+.+......+....|+|||++|+-...| ..|.++|+..+. ....+.+.. ..+..
T Consensus 177 wd~~~~~~--~~~~~~h~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~~~---~~~~~~~h~----~~v~~ 239 (410)
T 1vyh_C 177 WDFQGFEC--IRTMHGHDHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQTGY---CVKTFTGHR----EWVRM 239 (410)
T ss_dssp EETTSSCE--EECCCCCSSCEEEEEECSSSSEEEEEETT--------SEEEEEETTTCC---EEEEEECCS----SCEEE
T ss_pred EeCCCCce--eEEEcCCCCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCc---EEEEEeCCC----ccEEE
Confidence 78887651 23343334456678899999988766533 248888988763 233444544 45567
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEE-EeecccccccccccccCcceeEE-------eecCCCCEEEEEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEII-------QSHGEKNLIACSYRQ 377 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~~~~~~~l-------~~s~~~~~l~~~~~~ 377 (623)
..|++||++++.... ++.-+ .+|..+++... +......+....|.+........ ......+.++++...
T Consensus 240 ~~~~~~g~~l~s~s~-D~~v~--vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~ 316 (410)
T 1vyh_C 240 VRPNQDGTLIASCSN-DQTVR--VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 316 (410)
T ss_dssp EEECTTSSEEEEEET-TSCEE--EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET
T ss_pred EEECCCCCEEEEEcC-CCeEE--EEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC
Confidence 789999986655554 45444 45665655332 22222222222333211000000 000011345666666
Q ss_pred CCeEEEEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 378 NGRSYLGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 378 ~g~~~L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
++. |.++|+.+++. ..+......+..+ ++++..++ +++.. ..|...++.+++
T Consensus 317 D~~--i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~D---~~i~vwd~~~~~ 371 (410)
T 1vyh_C 317 DKT--IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADD---KTLRVWDYKNKR 371 (410)
T ss_dssp TSE--EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE-EEETT---TEEEEECCTTSC
T ss_pred CCe--EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE-EEeCC---CeEEEEECCCCc
Confidence 665 44557766654 3444334445555 55555443 44322 456667766554
No 326
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.63 E-value=8.2e-06 Score=83.53 Aligned_cols=242 Identities=8% Similarity=-0.074 Sum_probs=129.2
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCC--CcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDE--PSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~--~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
..+..+.|+|++.++.+-.. ++...+|..... + ....+.. |...+.+..++++ ..+++...++
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~---d~~v~i~~~~~~---~~~~~~~~~~--------h~~~v~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPN---NHEVHIYEKSGN---KWVQVHELKE--------HNGQVTGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp SCCCEEEECTTSSEEEEECS---SSEEEEEEEETT---EEEEEEEEEC--------CSSCEEEEEEETTTTEEEEEETTS
T ss_pred CCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCC---cEEeeeeecC--------CCCcccEEEEeCCCCEEEEEcCCC
Confidence 45678899983333333322 466666654322 2 1111111 1222345566655 4555555778
Q ss_pred cEEEEeCCCCCCCce-e--cCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc-cceeccc
Q 006979 166 RLYKHSIDSKDSSPL-P--ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-EPKVLVS 241 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~-~--Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~-~~~~l~~ 241 (623)
.|.++|+.++ ... . +... ........|+|+|++|+....+ ..+.++|++.+... ....+..
T Consensus 75 ~i~vwd~~~~--~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~v~i~d~~~~~~~~~~~~~~~ 139 (372)
T 1k8k_C 75 NAYVWTLKGR--TWKPTLVILRI----NRAARCVRWAPNEKKFAVGSGS---------RVISICYFEQENDWWVCKHIKK 139 (372)
T ss_dssp CEEEEEEETT--EEEEEEECCCC----SSCEEEEEECTTSSEEEEEETT---------SSEEEEEEETTTTEEEEEEECT
T ss_pred eEEEEECCCC--eeeeeEEeecC----CCceeEEEECCCCCEEEEEeCC---------CEEEEEEecCCCcceeeeeeec
Confidence 8999998765 321 2 1221 3346678899999988876654 33666666655310 0122222
Q ss_pred C-CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCC---------------ceeeeEEEcCCCCCccccCcC
Q 006979 242 G-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG---------------DVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 242 ~-~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~---------------~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+ ........|+|||++|+....+. .|+++|+.... .-.....+.+.. ..+..
T Consensus 140 ~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~ 207 (372)
T 1k8k_C 140 PIRSTVLSLDWHPNSVLLAAGSCDF--------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC----GWVHG 207 (372)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTS--------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS----SCEEE
T ss_pred ccCCCeeEEEEcCCCCEEEEEcCCC--------CEEEEEcccccccccccccccccccchhhheEecCCCC----CeEEE
Confidence 2 34456678999999888765332 37788854110 001222333333 45678
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE-EEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
+.|+|||++++.... ++. |..+|..+++.. .+......+....| .+ +++ ++++. .++.-++|
T Consensus 208 ~~~~~~~~~l~~~~~-d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~---------~~---~~~-~l~~~-~d~~i~i~ 270 (372)
T 1k8k_C 208 VCFSANGSRVAWVSH-DST--VCLADADKKMAVATLASETLPLLAVTF---------IT---ESS-LVAAG-HDCFPVLF 270 (372)
T ss_dssp EEECSSSSEEEEEET-TTE--EEEEEGGGTTEEEEEECSSCCEEEEEE---------EE---TTE-EEEEE-TTSSCEEE
T ss_pred EEECCCCCEEEEEeC-CCE--EEEEECCCCceeEEEccCCCCeEEEEE---------ec---CCC-EEEEE-eCCeEEEE
Confidence 899999985555544 354 556677666543 33322222332333 32 544 44444 56766676
Q ss_pred EEeC
Q 006979 385 ILDD 388 (623)
Q Consensus 385 ~~d~ 388 (623)
.++.
T Consensus 271 ~~~~ 274 (372)
T 1k8k_C 271 TYDS 274 (372)
T ss_dssp EEET
T ss_pred EccC
Confidence 6654
No 327
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.63 E-value=8.3e-08 Score=97.74 Aligned_cols=110 Identities=15% Similarity=0.120 Sum_probs=78.1
Q ss_pred CCCCEEEEecCCCCCc--------ccCcC----CHHhHHHHcCceE---EEEECCCCCCCCchhHHHhhccCCccchHHH
Q 006979 493 EKPPLLVKSHGGPTSE--------ARGIL----NLSIQYWTSRGWA---FVDVNYGGSTGYGREFRERLLGRWGIVDVND 557 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~--------~~~~~----~~~~~~~a~~G~~---v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D 557 (623)
.+.| ||++||..... ....| ...++.|.++||. |+.+|++|.+ ..-... .........++
T Consensus 39 ~~~p-VVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G---~S~~~~-~~~~~~~~~~~ 113 (342)
T 2x5x_A 39 TKTP-VIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSS---EQGSAQ-YNYHSSTKYAI 113 (342)
T ss_dssp CSCC-EEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHH---HHTCGG-GCCBCHHHHHH
T ss_pred CCCe-EEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCC---ccCCcc-ccCCHHHHHHH
Confidence 3344 78899985532 22355 6788999999999 9999999843 211000 01112234678
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC--CCceeEEEecccCCC
Q 006979 558 CCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF--RDTFKAGASLYGVSI 609 (623)
Q Consensus 558 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~--~~~f~a~v~~~g~~d 609 (623)
+.+.++.+.++- ..++|.|+||||||.+++.++ .+ |++++.+|.+++...
T Consensus 114 l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 114 IKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 888888877652 247999999999999999988 66 899999999988754
No 328
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.63 E-value=4.4e-06 Score=86.61 Aligned_cols=242 Identities=7% Similarity=-0.079 Sum_probs=138.6
Q ss_pred CceEEEeCCEEEEEeCCCCcEEEEeCCCCCCC-------ceecCCCCCCCCeeecceeeCCC----C---CEEEEEEecc
Q 006979 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSS-------PLPITPDYGEPLVSYADGIFDPR----F---NRYVTVREDR 212 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~-------~~~Lt~~~~~~~~~~~d~~~sPd----G---~~l~~v~~~~ 212 (623)
+.+.++++ .++++...++.|.++++.++ . ...+... ........|+|+ | ++|+....+
T Consensus 19 i~~~~~~~-~~l~s~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~g~~~~~l~s~~~d- 90 (397)
T 1sq9_A 19 IFSVSACN-SFTVSCSGDGYLKVWDNKLL--DNENPKDKSYSHFVH----KSGLHHVDVLQAIERDAFELCLVATTSFS- 90 (397)
T ss_dssp EEEEEECS-SEEEEEETTSEEEEEESBCC--TTCCGGGGEEEEECC----TTCEEEEEEEEEEETTTEEEEEEEEEETT-
T ss_pred eEEEEecC-CeEEEEcCCCEEEEEECCCc--ccccCCCcceEEecC----CCcEEEEEEecccccCCccccEEEEEcCC-
Confidence 44556666 45566667888999999876 3 2333322 234567889999 8 888776553
Q ss_pred CCCCCCceeEEEEEEcCCCCccc---ceecccC-----CCcccceeeC----CCCCE-EEEEEecCCCCCCCceEEEEEE
Q 006979 213 RQDALNSTTEIVAIALNGQNIQE---PKVLVSG-----SDFYAFPRMD----PRGER-MAWIEWHHPNMPWDKAELWVGY 279 (623)
Q Consensus 213 ~~~~~~~~~~L~~idl~~g~~~~---~~~l~~~-----~~~~~~p~wS----PDG~~-la~~~~~~~~~p~~~~~L~v~d 279 (623)
..|+++|+.+++... ...+... ...+....|+ |||+. |+....+. .|+++|
T Consensus 91 --------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg--------~i~iwd 154 (397)
T 1sq9_A 91 --------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG--------TTYIWK 154 (397)
T ss_dssp --------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS--------CEEEEE
T ss_pred --------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC--------cEEEEe
Confidence 447777877665100 1222222 2455667899 99998 77665332 378888
Q ss_pred ecC------CCcee--ee-EEE------cCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeec-
Q 006979 280 ISE------NGDVY--KR-VCV------AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSL- 343 (623)
Q Consensus 280 ~~~------~~~~~--~~-~~~------~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~- 343 (623)
+.. +..+. .. .+. .... ..+....|+|+| +++.... ++ .|..+|+.+++.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~-~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPS----QFATSVDISERG-LIATGFN-NG--TVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSC----CCCCEEEECTTS-EEEEECT-TS--EEEEEETTTTEEEEEEECC
T ss_pred CCccccccccceeeccCcceeeeeeccccCCC----CCceEEEECCCc-eEEEEeC-CC--cEEEEECCCCceeEEEecc
Confidence 876 42211 11 221 1122 457788999999 6666554 44 466677777654433322
Q ss_pred ------ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce-eeccc-------------CCcce
Q 006979 344 ------DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDI-------------PFTDI 403 (623)
Q Consensus 344 ------~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~-~~lt~-------------~~~~v 403 (623)
...+....|. |+++.|+.....++...|.++|+.+++. ..+.. ....+
T Consensus 227 ~~h~~~~~~i~~i~~~------------~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 294 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFS------------PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV 294 (397)
T ss_dssp C---CCCCCEEEEEEC------------SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCE
T ss_pred ccccccCCccceEEEC------------CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcE
Confidence 2233333333 2777777666554456788889876654 34443 33345
Q ss_pred Eee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 404 DNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 404 ~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
..+ ++++..++ ++.. ...|+.+++..++.
T Consensus 295 ~~~~~~~~~~~l~-~~~~---dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 295 MSLSFNDSGETLC-SAGW---DGKLRFWDVKTKER 325 (397)
T ss_dssp EEEEECSSSSEEE-EEET---TSEEEEEETTTTEE
T ss_pred EEEEECCCCCEEE-EEeC---CCeEEEEEcCCCce
Confidence 555 55666544 3332 24788888887753
No 329
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=98.62 E-value=2.8e-08 Score=98.58 Aligned_cols=92 Identities=15% Similarity=-0.014 Sum_probs=61.5
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHH-HHhCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATF-LVGSGKADE 573 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~-l~~~~~~d~ 573 (623)
.|.||++||.+. ....|...+..|++ ||.|+.+|+||.|.... . .....+++..+.+.. +.+.. +.
T Consensus 51 ~~~lvllHG~~~--~~~~~~~l~~~L~~-~~~v~~~D~~G~G~S~~---~-----~~~~~~~~~a~~~~~~l~~~~--~~ 117 (280)
T 3qmv_A 51 PLRLVCFPYAGG--TVSAFRGWQERLGD-EVAVVPVQLPGRGLRLR---E-----RPYDTMEPLAEAVADALEEHR--LT 117 (280)
T ss_dssp SEEEEEECCTTC--CGGGGTTHHHHHCT-TEEEEECCCTTSGGGTT---S-----CCCCSHHHHHHHHHHHHHHTT--CS
T ss_pred CceEEEECCCCC--ChHHHHHHHHhcCC-CceEEEEeCCCCCCCCC---C-----CCCCCHHHHHHHHHHHHHHhC--CC
Confidence 378999999853 34467777888877 99999999999543211 1 112234444433333 33221 34
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCcee
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFK 599 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~ 599 (623)
+++.|+|||+||.+++.++ .+|++.+
T Consensus 118 ~~~~lvG~S~Gg~va~~~a~~~p~~~~ 144 (280)
T 3qmv_A 118 HDYALFGHSMGALLAYEVACVLRRRGA 144 (280)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEeCHhHHHHHHHHHHHHHcCC
Confidence 7899999999999999988 6665544
No 330
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.61 E-value=2.3e-05 Score=81.57 Aligned_cols=149 Identities=11% Similarity=0.029 Sum_probs=94.2
Q ss_pred ceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 148 ~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
.+..++++ ..+++...++.|.++|+.++ .....+... ........|+|+|++|+....+ ..+.++
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~-~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~d---------~~v~iw 192 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENR-KIVMILQGH----EQDIYSLDYFPSGDKLVSGSGD---------RTVRIW 192 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEccC----CCCEEEEEEcCCCCEEEEecCC---------CcEEEE
Confidence 35666665 55666667888999999876 222334322 3346678899999988766543 568888
Q ss_pred EcCCCCcccceecccCCCcccceeeCC-CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE-------cCCCCC
Q 006979 227 ALNGQNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-------AGFDPT 298 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~~~~~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~-------~~~~~~ 298 (623)
|+.+++ ........+......|+| ||++|+....+. .|.++|+..+.. ...+ .+..
T Consensus 193 d~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~--------~v~iwd~~~~~~---~~~~~~~~~~~~~h~-- 256 (393)
T 1erj_A 193 DLRTGQ---CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR--------AVRVWDSETGFL---VERLDSENESGTGHK-- 256 (393)
T ss_dssp ETTTTE---EEEEEECSSCEEEEEECSTTCCEEEEEETTS--------CEEEEETTTCCE---EEEEC------CCCS--
T ss_pred ECCCCe---eEEEEEcCCCcEEEEEECCCCCEEEEEcCCC--------cEEEEECCCCcE---EEeecccccCCCCCC--
Confidence 998876 332222333445578999 899888766443 277888876632 1112 1222
Q ss_pred ccccCcCceeCCCCcEEEEEeCCCCeeeEEE
Q 006979 299 IVESPTEPKWSSKGELFFVTDRKNGFWNLHK 329 (623)
Q Consensus 299 ~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~ 329 (623)
..+....|+|||++++.... ++.-+||-
T Consensus 257 --~~v~~v~~~~~g~~l~s~s~-d~~v~~wd 284 (393)
T 1erj_A 257 --DSVYSVVFTRDGQSVVSGSL-DRSVKLWN 284 (393)
T ss_dssp --SCEEEEEECTTSSEEEEEET-TSEEEEEE
T ss_pred --CCEEEEEECCCCCEEEEEeC-CCEEEEEE
Confidence 45667899999995555554 46555553
No 331
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.61 E-value=5e-06 Score=86.64 Aligned_cols=242 Identities=10% Similarity=-0.013 Sum_probs=133.6
Q ss_pred CCceEEEeCC-E-EEEEeCCCCcEEEEeC----CCCCC------CceecCCCCCC------CCeeecceeeCCCCCEEEE
Q 006979 146 GGGAFRIFGD-T-VIFSNYKDQRLYKHSI----DSKDS------SPLPITPDYGE------PLVSYADGIFDPRFNRYVT 207 (623)
Q Consensus 146 g~~~~~~s~d-~-l~f~~~~~~~l~~~d~----~~g~~------~~~~Lt~~~~~------~~~~~~d~~~sPdG~~l~~ 207 (623)
.+.+..++++ . ++++...++.|.++++ .++ . ....+...... .........|+|+|++|+.
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEG-KKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC-------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCc-cccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 3566777765 4 6666667788999998 766 2 12333321000 1235667889999998887
Q ss_pred EEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCcee
Q 006979 208 VREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY 287 (623)
Q Consensus 208 v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~ 287 (623)
...+ ..|.++|..+.. ...+......+....|+|||++|+....+. .|.++++..+.
T Consensus 126 ~~~d---------g~i~i~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~--- 182 (425)
T 1r5m_A 126 GVEN---------GELRLWNKTGAL---LNVLNFHRAPIVSVKWNKDGTHIISMDVEN--------VTILWNVISGT--- 182 (425)
T ss_dssp EETT---------SCEEEEETTSCE---EEEECCCCSCEEEEEECTTSSEEEEEETTC--------CEEEEETTTTE---
T ss_pred EeCC---------CeEEEEeCCCCe---eeeccCCCccEEEEEECCCCCEEEEEecCC--------eEEEEECCCCc---
Confidence 6554 347777855443 455554455566789999999988776332 38888887662
Q ss_pred eeEEEcCCCCC-----------ccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEE-Eeeccccccccccccc
Q 006979 288 KRVCVAGFDPT-----------IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFG 355 (623)
Q Consensus 288 ~~~~~~~~~~~-----------~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~ 355 (623)
....+...... -...+....|++++.++..... + .|+.+|..+++... +......+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g--~i~~~d~~~~~~~~~~~~~~~~i~~~----- 253 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK--G--AIFVYQITEKTPTGKLIGHHGPISVL----- 253 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGG--G--CEEEEETTCSSCSEEECCCSSCEEEE-----
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC--C--eEEEEEcCCCceeeeeccCCCceEEE-----
Confidence 22222222200 0001678899999854443332 3 57777777765332 22222222222
Q ss_pred CcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 356 INSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 356 ~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
.+. ++++.|+ +...++. |.++|+..++. ..+......+..+ ++++ .++++.. ...|+.+++.
T Consensus 254 ----~~~---~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~---d~~i~i~d~~ 318 (425)
T 1r5m_A 254 ----EFN---DTNKLLL-SASDDGT--LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSM---DGSVRLWSLK 318 (425)
T ss_dssp ----EEE---TTTTEEE-EEETTSC--EEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEET---TSEEEEEETT
T ss_pred ----EEC---CCCCEEE-EEcCCCE--EEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeC---CCcEEEEECC
Confidence 333 2666444 4445555 45556665543 3444334445555 4444 4444433 2478888887
Q ss_pred CCc
Q 006979 433 DHK 435 (623)
Q Consensus 433 ~~~ 435 (623)
+++
T Consensus 319 ~~~ 321 (425)
T 1r5m_A 319 QNT 321 (425)
T ss_dssp TTE
T ss_pred CCc
Confidence 765
No 332
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.60 E-value=5.3e-06 Score=86.84 Aligned_cols=196 Identities=11% Similarity=0.061 Sum_probs=118.0
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCC--CCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~--~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g 231 (623)
.+.|||++...++|+++++++.. .....+... ........++++.++.|+++.... ..|.++++++.
T Consensus 123 ~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~---~~~~p~glavD~~~~~lY~~d~~~--------~~I~~~~~~g~ 191 (400)
T 3p5b_L 123 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---DIQAPDGLAVDWIHSNIYWTDSVL--------GTVSVADTKGV 191 (400)
T ss_dssp TTEEEEEETTTTEEEEEEC------CCCEEEECS---SCSCEEEEEEETTTTEEEEEETTT--------TEEEEECTTTC
T ss_pred cCceEEEecCCCeEEEEEcccCCCCCcceEEEeC---CCCCcccEEEEecCCceEEEECCC--------CeEEEEeCCCC
Confidence 45899999888889999987520 022333221 012334567888777787764322 57999999987
Q ss_pred Ccccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC
Q 006979 232 NIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (623)
Q Consensus 232 ~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~ 310 (623)
. .+.+.. +.......+..|.+.+|+|..+.. ...|+++++++.. ...++...- ..+..+++++
T Consensus 192 ~---~~~l~~~~~~~P~~iavdp~~g~ly~td~~~------~~~I~~~~~dG~~---~~~~~~~~l----~~P~glavd~ 255 (400)
T 3p5b_L 192 K---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVD---IYSLVTENI----QWPNGITLDL 255 (400)
T ss_dssp S---EEEEEECSSCCEEEEEEETTTTEEEEEECSS------SCCEEEEETTSCS---CEEEECSSC----SCEEEEEEET
T ss_pred c---eEEEEeCCCCCcceEEEecccCeEEEEeCCC------CCEEEEEeCCCCc---cEEEEECCC----CceEEEEEEe
Confidence 6 444443 333334557999889999987643 2359999998762 233333222 3456788998
Q ss_pred CCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 311 KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 311 DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
+++.+|.++. +...|+++|+++...+.+.........| ..+.+ +++.+||+. .+...|+++|..+
T Consensus 256 ~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P------~gl~v-----~~~~lywtd--~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 256 LSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP------FSLAV-----FEDKVFWTD--IINEAIFSANRLT 320 (400)
T ss_dssp TTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSE------EEEEE-----ETTEEEEEE--SSSCSEEEEESSS
T ss_pred CCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCC------EEEEE-----eCCEEEEec--CCCCeEEEEEcCC
Confidence 8774445565 4568999999877666665432222211 12222 456788776 3344577777443
Q ss_pred C
Q 006979 391 H 391 (623)
Q Consensus 391 ~ 391 (623)
|
T Consensus 321 G 321 (400)
T 3p5b_L 321 G 321 (400)
T ss_dssp C
T ss_pred C
Confidence 3
No 333
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.60 E-value=8e-06 Score=85.47 Aligned_cols=233 Identities=10% Similarity=0.007 Sum_probs=138.7
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc-c
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-Q 234 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~-~ 234 (623)
.++|+. ...|.++++++. ..+.+... ......+.|++.++.|+++.... ..|+++++++... .
T Consensus 85 ~ll~~~--~~~I~~i~l~~~--~~~~~~~~----~~~~~~l~~d~~~~~lywsD~~~--------~~I~~~~~~g~~~~~ 148 (400)
T 3p5b_L 85 YLFFTN--RHEVRKMTLDRS--EYTSLIPN----LRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVS 148 (400)
T ss_dssp EEEEEE--TTEEEEECTTSC--SCEEEECS----CSCEEEEEEETTTTEEEEEETTT--------TEEEEEEC------C
T ss_pred eeEEec--cceeEEEccCCc--ceeEeccc----cCcceEEeeeeccCceEEEecCC--------CeEEEEEcccCCCCC
Confidence 466764 356999999865 44454433 23345678999888888875432 5799999986210 0
Q ss_pred cceec-ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc
Q 006979 235 EPKVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (623)
Q Consensus 235 ~~~~l-~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~ 313 (623)
....+ ..+.....+.++.+.++.|||.... ...|.++++++.. ...++.... ..+..++..|.+.
T Consensus 149 ~~~~~~~~~~~~p~glavD~~~~~lY~~d~~-------~~~I~~~~~~g~~---~~~l~~~~~----~~P~~iavdp~~g 214 (400)
T 3p5b_L 149 SYDTVISRDIQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVK---RKTLFRENG----SKPRAIVVDPVHG 214 (400)
T ss_dssp CCEEEECSSCSCEEEEEEETTTTEEEEEETT-------TTEEEEECTTTCS---EEEEEECSS----CCEEEEEEETTTT
T ss_pred cceEEEeCCCCCcccEEEEecCCceEEEECC-------CCeEEEEeCCCCc---eEEEEeCCC----CCcceEEEecccC
Confidence 02333 3343444556788878889988633 3468899987652 233333222 2345667888655
Q ss_pred EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
.+|.++. .....|+++++++...+.+.... +..| +.+.+- ++++.|||+. .+..+|+++|++++..
T Consensus 215 ~ly~td~-~~~~~I~~~~~dG~~~~~~~~~~--l~~P------~glavd---~~~~~lY~aD--~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 215 FMYWTDW-GTPAKIKKGGLNGVDIYSLVTEN--IQWP------NGITLD---LLSGRLYWVD--SKLHSISSIDVNGGNR 280 (400)
T ss_dssp EEEEEEC-SSSCCEEEEETTSCSCEEEECSS--CSCE------EEEEEE---TTTTEEEEEE--TTTTEEEEEETTSCCC
T ss_pred eEEEEeC-CCCCEEEEEeCCCCccEEEEECC--CCce------EEEEEE---eCCCEEEEEE--CCCCEEEEEeCCCCcc
Confidence 4445565 23357999999876666554321 1111 233333 2678899885 4456899999988776
Q ss_pred eecccCC---cceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 394 SLLDIPF---TDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 394 ~~lt~~~---~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
+.+.... ..-.++..+++.+|++-. ....|++++..+|+
T Consensus 281 ~~~~~~~~~l~~P~gl~v~~~~lywtd~---~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 281 KTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 322 (400)
T ss_dssp EEEEECSSTTSSEEEEEEETTEEEEEES---SSCSEEEEESSSCC
T ss_pred EEEEeCCCCCCCCEEEEEeCCEEEEecC---CCCeEEEEEcCCCC
Confidence 6554321 122344557778877653 23468888865554
No 334
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.60 E-value=1.7e-06 Score=90.39 Aligned_cols=233 Identities=11% Similarity=0.050 Sum_probs=128.6
Q ss_pred CCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCC--cccceec
Q 006979 162 YKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN--IQEPKVL 239 (623)
Q Consensus 162 ~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~--~~~~~~l 239 (623)
..++.|.++++.++ ...+.+... ..........|+|+|++|+....+ ..|.++|+.+.. ......+
T Consensus 42 ~~d~~v~iw~~~~~-~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d---------g~v~vw~~~~~~~~~~~~~~~ 109 (416)
T 2pm9_A 42 STDSSLELWSLLAA-DSEKPIASL--QVDSKFNDLDWSHNNKIIAGALDN---------GSLELYSTNEANNAINSMARF 109 (416)
T ss_dssp CCCCCCEEEESSSG-GGCSCSCCC--CCSSCEEEEEECSSSSCEEEEESS---------SCEEEECCSSTTSCCCEEEEC
T ss_pred CCCCeEEEEEccCC-CCCcEEEEE--ecCCceEEEEECCCCCeEEEEccC---------CeEEEeecccccccccchhhc
Confidence 56678999999865 111122111 013456778999999988776554 347777887611 0013444
Q ss_pred ccCCCcccceeeCCC-CCEEEEEEecCCCCCCCceEEEEEEecCCC------ceeeeEEEcCCCCCccccCcCceeCCCC
Q 006979 240 VSGSDFYAFPRMDPR-GERMAWIEWHHPNMPWDKAELWVGYISENG------DVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (623)
Q Consensus 240 ~~~~~~~~~p~wSPD-G~~la~~~~~~~~~p~~~~~L~v~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ws~DG 312 (623)
......+...+|+|| ++.|+....+ ..|.++|+..+. .........+.. ..+..+.|+|++
T Consensus 110 ~~h~~~v~~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~ 177 (416)
T 2pm9_A 110 SNHSSSVKTVKFNAKQDNVLASGGNN--------GEIFIWDMNKCTESPSNYTPLTPGQSMSSV----DEVISLAWNQSL 177 (416)
T ss_dssp CCSSSCCCEEEECSSSTTBEEEECSS--------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSS----CCCCEEEECSSC
T ss_pred cCCccceEEEEEcCCCCCEEEEEcCC--------CeEEEEECCCCccccccccccccccccCCC----CCeeEEEeCCCC
Confidence 444455667889999 7766554422 238888887663 100000011222 456789999995
Q ss_pred -cEEEEEeCCCCeeeEEEEecCCCeEEEEeec-------ccccccccccccCcceeEEeecCCCCEEEEEEEECC-eEEE
Q 006979 313 -ELFFVTDRKNGFWNLHKWIESNNEVLAIYSL-------DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG-RSYL 383 (623)
Q Consensus 313 -~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~-------~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g-~~~L 383 (623)
.+++.... ++ .|..+|+.+++....... ...+.. +.+. |++..++++...++ ...|
T Consensus 178 ~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~---------~~~~---~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 178 AHVFASAGS-SN--FASIWDLKAKKEVIHLSYTSPNSGIKQQLSV---------VEWH---PKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp TTEEEEESS-SS--CEEEEETTTTEEEEEECCCCCSSCCCCCEEE---------EEEC---SSCTTEEEEEECCSSSCCC
T ss_pred CcEEEEEcC-CC--CEEEEECCCCCcceEEeccccccccCCceEE---------EEEC---CCCCCEEEEEECCCCCceE
Confidence 46666554 34 466677777764433322 112222 2332 26655555555554 2256
Q ss_pred EEEeCCCC-c-eeecc-cCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 384 GILDDFGH-S-LSLLD-IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 384 ~~~d~~~~-~-~~~lt-~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
.++|+.++ . ...+. .....+..+ +++++.++++++. ...|..+++.+++.
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR---DNTVLLWNPESAEQ 297 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES---SSEEEEECSSSCCE
T ss_pred EEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC---CCCEEEeeCCCCcc
Confidence 66677664 2 33343 333445555 5534445555543 24688888877653
No 335
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.60 E-value=5.9e-06 Score=83.58 Aligned_cols=273 Identities=8% Similarity=-0.010 Sum_probs=145.3
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCC---CcccCCCCCccceeeeecCCceEEEeCC-E-EEEEeC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDE---PSDITPKEYAVRTTAQEYGGGAFRIFGD-T-VIFSNY 162 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~---~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~-l~f~~~ 162 (623)
..+..+.|+| +..++ +-.. +|...+|..... .. .+.+. .+...+.+..++++ . .+++..
T Consensus 12 ~~v~~~~~s~~~~~l~-~~~~---d~~v~iw~~~~~--~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLL-ITSW---DGSLTVYKFDIQ--AKNVDLLQSL---------RYKHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SCEEEEEEEGGGTEEE-EEET---TSEEEEEEEETT--TTEEEEEEEE---------ECSSCEEEEEEEESSSEEEEEEE
T ss_pred CcEEEEEEcCCCCEEE-EEcC---CCeEEEEEeCCC--Cccccceeee---------ecCCceEEEEECCCCCcEEEEEc
Confidence 4466788888 55443 3322 477677765433 10 11111 11222344555533 5 566666
Q ss_pred CCCcEEEEeC-CCCCCCceecCC--CCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC---------
Q 006979 163 KDQRLYKHSI-DSKDSSPLPITP--DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG--------- 230 (623)
Q Consensus 163 ~~~~l~~~d~-~~g~~~~~~Lt~--~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~--------- 230 (623)
.++.|+++++ .++ ....+.. . ........|+| ++.++....+ ..|.++|+.+
T Consensus 77 ~dg~i~~wd~~~~~--~~~~~~~~~~----~~~v~~l~~~~-~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~ 140 (342)
T 1yfq_A 77 VQGEILKVDLIGSP--SFQALTNNEA----NLGICRICKYG-DDKLIAASWD---------GLIEVIDPRNYGDGVIAVK 140 (342)
T ss_dssp TTSCEEEECSSSSS--SEEECBSCCC----CSCEEEEEEET-TTEEEEEETT---------SEEEEECHHHHTTBCEEEE
T ss_pred CCCeEEEEEeccCC--ceEeccccCC----CCceEEEEeCC-CCEEEEEcCC---------CeEEEEccccccccccccc
Confidence 7888999999 876 5555554 3 34566788999 8887766543 5688888876
Q ss_pred CCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecC-CCceeeeEEEcCCCCCccccCcCceeC
Q 006979 231 QNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE-NGDVYKRVCVAGFDPTIVESPTEPKWS 309 (623)
Q Consensus 231 g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ws 309 (623)
++. ...+. .........|+||+ |+.... ...|.++|+.. ... .......... ..+..+.|+
T Consensus 141 ~~~--~~~~~-~~~~v~~~~~~~~~--l~~~~~--------d~~i~i~d~~~~~~~-~~~~~~~~~~----~~i~~i~~~ 202 (342)
T 1yfq_A 141 NLN--SNNTK-VKNKIFTMDTNSSR--LIVGMN--------NSQVQWFRLPLCEDD-NGTIEESGLK----YQIRDVALL 202 (342)
T ss_dssp ESC--SSSSS-SCCCEEEEEECSSE--EEEEES--------TTEEEEEESSCCTTC-CCEEEECSCS----SCEEEEEEC
T ss_pred CCe--eeEEe-eCCceEEEEecCCc--EEEEeC--------CCeEEEEECCccccc-cceeeecCCC----CceeEEEEC
Confidence 431 22222 33445567899998 554442 23588999887 422 1222233333 456788999
Q ss_pred C-CCcEEEEEeCCCCeeeEEEEecC-----CCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 310 S-KGELFFVTDRKNGFWNLHKWIES-----NNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 310 ~-DG~l~~~~~~~~g~~~L~~~d~~-----~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
| ||++++.... +|.-.||.++.. ......+...........-......+.+. |+++.|+ +...+|. |
T Consensus 203 ~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---~~~~~l~-~~~~dg~--i 275 (342)
T 1yfq_A 203 PKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS---PRHKFLY-TAGSDGI--I 275 (342)
T ss_dssp SGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC---TTTCCEE-EEETTSC--E
T ss_pred CCCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc---CCCCEEE-EecCCce--E
Confidence 9 9986555555 577777766654 12223332221100000000001122333 3666554 4445554 5
Q ss_pred EEEeCCCCce-eecccC-CcceEeeeecCCEEEEEE
Q 006979 384 GILDDFGHSL-SLLDIP-FTDIDNITLGNDCLFVEG 417 (623)
Q Consensus 384 ~~~d~~~~~~-~~lt~~-~~~v~~~~~~~~~~~~~~ 417 (623)
+++|+.+++. ..+... ...+..+.+++..++..+
T Consensus 276 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s 311 (342)
T 1yfq_A 276 SCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311 (342)
T ss_dssp EEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEE
T ss_pred EEEcCccHhHhhhhhcccCCCceEecCCCCeEEEEe
Confidence 5567776654 344433 344554454555444433
No 336
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.60 E-value=6.2e-06 Score=83.44 Aligned_cols=234 Identities=13% Similarity=0.058 Sum_probs=139.5
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.|+|+. ...|.++++++.......+... ........|++.++.|+++.... ..|++++++++...
T Consensus 6 ~ll~~~--~~~I~~i~l~~~~~~~~~~~~~----~~~~~~ld~d~~~~~lyw~D~~~--------~~I~r~~~~g~~~~- 70 (318)
T 3sov_A 6 LLLYAN--RRDLRLVDATNGKENATIVVGG----LEDAAAVDFVFSHGLIYWSDVSE--------EAIKRTEFNKTESV- 70 (318)
T ss_dssp EEEEEC--EEEEEEEETTCTTSCCEEEEEE----EEEEEEEEEEGGGTEEEEEETTT--------TEEEEEETTSSSCC-
T ss_pred EEEEEc--cCeEEEEECCCCceEEEEEecC----CCccEEEEEEeCCCEEEEEECCC--------CcEEEEEccCCCce-
Confidence 467763 4569999998651112222211 12334567999888888764422 67999999886410
Q ss_pred ceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEE
Q 006979 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELF 315 (623)
Q Consensus 236 ~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~ 315 (623)
...+..+.....+.++.+.++.|+|.... ...|.++++++.. ...+..... ..+...+..|++..+
T Consensus 71 ~~~~~~~l~~p~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~---~~~l~~~~~----~~P~giavdp~~g~l 136 (318)
T 3sov_A 71 QNVVVSGLLSPDGLACDWLGEKLYWTDSE-------TNRIEVSNLDGSL---RKVLFWQEL----DQPRAIALDPSSGFM 136 (318)
T ss_dssp CEEEEECCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSCS---CEEEECSSC----SSEEEEEEEGGGTEE
T ss_pred EEEEcCCCCCccEEEEEcCCCeEEEEECC-------CCEEEEEECCCCc---EEEEEeCCC----CCccEEEEeCCCCEE
Confidence 12333333444567788888889988632 3469999987652 222332222 344567778765544
Q ss_pred EEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceee
Q 006979 316 FVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (623)
Q Consensus 316 ~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~ 395 (623)
|.++. .....|+++++++...+.+.... +..| +.+.+. ++++.|||+. .+..+|+++|++++..+.
T Consensus 137 y~td~-~~~~~I~r~~~dG~~~~~~~~~~--l~~P------nglavd---~~~~~lY~aD--~~~~~I~~~d~dG~~~~~ 202 (318)
T 3sov_A 137 YWTDW-GEVPKIERAGMDGSSRFIIINSE--IYWP------NGLTLD---YEEQKLYWAD--AKLNFIHKSNLDGTNRQA 202 (318)
T ss_dssp EEEEC-SSSCEEEEEETTSCSCEEEECSS--CSCE------EEEEEE---TTTTEEEEEE--TTTTEEEEEETTSCSCEE
T ss_pred EEEec-CCCCEEEEEEcCCCCeEEEEECC--CCCc------cEEEEe---ccCCEEEEEE--CCCCEEEEEcCCCCceEE
Confidence 45564 23568999998876555554321 1111 233443 2688899986 455689999998876665
Q ss_pred ccc-CCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 396 LDI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 396 lt~-~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
+.. ....-.++..+++.+|++-. ....|++++..+|+
T Consensus 203 ~~~~~~~~P~glav~~~~lywtd~---~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 203 VVKGSLPHPFALTLFEDILYWTDW---STHSILACNKYTGE 240 (318)
T ss_dssp EECSCCSCEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EecCCCCCceEEEEeCCEEEEEec---CCCeEEEEECCCCC
Confidence 543 22222344556777777632 34578888886665
No 337
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.60 E-value=1.2e-05 Score=83.19 Aligned_cols=154 Identities=12% Similarity=0.045 Sum_probs=91.6
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCC-----ceecCCCCCCC--CeeecceeeC----CCCCE-EEEEEeccCCCCCCceeEE
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSS-----PLPITPDYGEP--LVSYADGIFD----PRFNR-YVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~-----~~~Lt~~~~~~--~~~~~d~~~s----PdG~~-l~~v~~~~~~~~~~~~~~L 223 (623)
..+++...++.|+++++.++ .. ...+.... .. ........|+ |+++. |+....+ ..|
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---------g~i 150 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITRE-DETKKVIFEKLDLLD-SDMKKHSFWALKWGASNDRLLSHRLVATDVK---------GTT 150 (397)
T ss_dssp EEEEEEETTSCEEEEEEEEC-TTTCCEEEEEECCSC-TTGGGSCEEEEEEECCC----CEEEEEEETT---------SCE
T ss_pred cEEEEEcCCCCEEEEEccCC-cccccccceeecccc-cccCCCcEEEEEEeeccCCCCceEEEEEeCC---------CcE
Confidence 56666667888999998876 22 33443310 00 1446678899 99998 6665443 457
Q ss_pred EEEEcCC------CCcccce-----ecc-------cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCc
Q 006979 224 VAIALNG------QNIQEPK-----VLV-------SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD 285 (623)
Q Consensus 224 ~~idl~~------g~~~~~~-----~l~-------~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~ 285 (623)
+++|+.+ ++. +. .+. ..........|+||| .|+... . ...|.++|+..+.
T Consensus 151 ~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~-------dg~i~i~d~~~~~- 218 (397)
T 1sq9_A 151 YIWKFHPFADESNSLT--LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF-N-------NGTVQISELSTLR- 218 (397)
T ss_dssp EEEEEESSSSHHHHTT--TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC-T-------TSEEEEEETTTTE-
T ss_pred EEEeCCccccccccce--eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe-C-------CCcEEEEECCCCc-
Confidence 7778776 431 22 331 123445667899999 666543 2 3358999988762
Q ss_pred eeeeEEEcC---C---CCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE
Q 006979 286 VYKRVCVAG---F---DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 286 ~~~~~~~~~---~---~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~ 338 (623)
....+.. . . ..+..+.|+|||++++......+...|..+|..+++..
T Consensus 219 --~~~~~~~~~~h~~~~----~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 219 --PLYNFESQHSMINNS----NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp --EEEEEECCC---CCC----CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred --eeEEEeccccccccC----CccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 3333443 2 3 45678899999995555443133367888888777643
No 338
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.59 E-value=1.1e-05 Score=80.71 Aligned_cols=256 Identities=10% Similarity=0.024 Sum_probs=138.7
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.++| +..+. .-. .+|...||..... .....+.. ++....+..++++ ..+++...++
T Consensus 13 ~~~V~~~~fsp~~~~l~-s~~---~dg~v~lWd~~~~---~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVL-TTL---YSGRVELWNYETQ---VEVRSIQV--------TETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CSCEEEEEECSSSSEEE-EEE---TTSEEEEEETTTT---EEEEEEEC--------CSSCEEEEEEEGGGTEEEEEETTS
T ss_pred CCceEEEEECCCCCEEE-EEc---CCCcEEEEECCCC---ceeEEeec--------cCCcEEEEEEeCCCCEEEEECCCC
Confidence 34567889998 54443 332 2577777765432 21111110 1111233344444 4556666788
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccce-ecccCCC
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPK-VLVSGSD 244 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~-~l~~~~~ 244 (623)
.|.++|+.++ .....+... ........|+|++++|+....| ..+.+.|+.++.. .. .+.....
T Consensus 78 ~i~vwd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~sgs~D---------~~v~lWd~~~~~~--~~~~~~~h~~ 141 (304)
T 2ynn_A 78 RIRVFNYNTG-EKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWENNWA--LEQTFEGHEH 141 (304)
T ss_dssp EEEEEETTTC-CEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SCEEEEEGGGTTE--EEEEECCCCS
T ss_pred EEEEEECCCC-cEEEEEeCC----CCcEEEEEEcCCCCEEEEECCC---------CeEEEEECCCCcc--hhhhhcccCC
Confidence 8999999876 223344332 3446678899999988765554 4577888877631 22 2333345
Q ss_pred cccceeeCC-CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC--CCcEEEEEeCC
Q 006979 245 FYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRK 321 (623)
Q Consensus 245 ~~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~--DG~l~~~~~~~ 321 (623)
.+...+|+| |++.|+-...| ..|.+.|+..... ...+..+.. ..+....|+| |+++++....
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D--------~~v~iwd~~~~~~--~~~~~~~~~----~~v~~~~~~~~~~~~~l~s~s~- 206 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLD--------RTVKVWSLGQSTP--NFTLTTGQE----RGVNYVDYYPLPDKPYMITASD- 206 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETT--------SEEEEEETTCSSC--SEEEECCCT----TCEEEEEECCSTTCCEEEEEET-
T ss_pred cEEEEEECCCCCCEEEEEeCC--------CeEEEEECCCCCc--cceeccCCc----CcEEEEEEEEcCCCCEEEEEcC-
Confidence 566778999 67777655533 2488888866532 222333332 3344566765 6665555444
Q ss_pred CCeeeEEEEecCCCeEE-EEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce-eecccC
Q 006979 322 NGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIP 399 (623)
Q Consensus 322 ~g~~~L~~~d~~~~~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~-~~lt~~ 399 (623)
++. |..+|..+++.. .+......+... .|. |+++ ++++...+|.-+|| |..+++. +.+...
T Consensus 207 D~~--i~iWd~~~~~~~~~~~~h~~~v~~~---------~~~---p~~~-~l~s~s~Dg~i~iW--d~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 207 DLT--IKIWDYQTKSCVATLEGHMSNVSFA---------VFH---PTLP-IIISGSEDGTLKIW--NSSTYKVEKTLNVG 269 (304)
T ss_dssp TSE--EEEEETTTTEEEEEEECCSSCEEEE---------EEC---SSSS-EEEEEETTSCEEEE--ETTTCCEEEEECCS
T ss_pred CCe--EEEEeCCCCccceeeCCCCCCEEEE---------EEC---CCCC-EEEEEcCCCeEEEE--ECCCCceeeeccCC
Confidence 454 555677776543 332222222222 222 2555 55566667765555 7666654 344443
Q ss_pred CcceEee
Q 006979 400 FTDIDNI 406 (623)
Q Consensus 400 ~~~v~~~ 406 (623)
...+..+
T Consensus 270 ~~~~~~~ 276 (304)
T 2ynn_A 270 LERSWCI 276 (304)
T ss_dssp SSSEEEE
T ss_pred CccEEEE
Confidence 3334333
No 339
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.57 E-value=3.3e-06 Score=85.49 Aligned_cols=194 Identities=12% Similarity=0.122 Sum_probs=120.7
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~ 233 (623)
.+.|||++...++|++++++++......+... .......++++.++.|+++.... ..|.++++++..
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~----l~~p~glavd~~~g~ly~~d~~~--------~~I~~~~~dG~~- 112 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG----LLSPDGLACDWLGEKLYWTDSET--------NRIEVSNLDGSL- 112 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEEC----CSCCCEEEEETTTTEEEEEETTT--------TEEEEEETTSCS-
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCC----CCCccEEEEEcCCCeEEEEECCC--------CEEEEEECCCCc-
Confidence 46899999888899999998651111222221 11234577888777887764322 579999998765
Q ss_pred ccceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCC
Q 006979 234 QEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (623)
Q Consensus 234 ~~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG 312 (623)
.+.+. .+.......++.|++.+|+|..+.. ...|+++++++.. ...++...- ..+..++|++++
T Consensus 113 --~~~l~~~~~~~P~giavdp~~g~ly~td~~~------~~~I~r~~~dG~~---~~~~~~~~l----~~Pnglavd~~~ 177 (318)
T 3sov_A 113 --RKVLFWQELDQPRAIALDPSSGFMYWTDWGE------VPKIERAGMDGSS---RFIIINSEI----YWPNGLTLDYEE 177 (318)
T ss_dssp --CEEEECSSCSSEEEEEEEGGGTEEEEEECSS------SCEEEEEETTSCS---CEEEECSSC----SCEEEEEEETTT
T ss_pred --EEEEEeCCCCCccEEEEeCCCCEEEEEecCC------CCEEEEEEcCCCC---eEEEEECCC----CCccEEEEeccC
Confidence 44443 3333445567899888999987542 3569999988652 223332222 345678999977
Q ss_pred cEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCc
Q 006979 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (623)
Q Consensus 313 ~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~ 392 (623)
+.+|.++. +...|+++|.++...+.+... ....| ..+.+ +++.+||+. .+...|++++..+|+
T Consensus 178 ~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~--~~~~P------~glav-----~~~~lywtd--~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 178 QKLYWADA--KLNFIHKSNLDGTNRQAVVKG--SLPHP------FALTL-----FEDILYWTD--WSTHSILACNKYTGE 240 (318)
T ss_dssp TEEEEEET--TTTEEEEEETTSCSCEEEECS--CCSCE------EEEEE-----ETTEEEEEE--TTTTEEEEEETTTCC
T ss_pred CEEEEEEC--CCCEEEEEcCCCCceEEEecC--CCCCc------eEEEE-----eCCEEEEEe--cCCCeEEEEECCCCC
Confidence 74445565 456899999987665555432 11211 12333 456788874 345578888875443
No 340
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.56 E-value=9.7e-06 Score=83.02 Aligned_cols=246 Identities=10% Similarity=0.033 Sum_probs=137.9
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC---CEEEEEeCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYK 163 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~---d~l~f~~~~ 163 (623)
...+..+.|+| +..+. .-.. +|...+|.....++ +....+.. |...+.+..+++ +.++++...
T Consensus 11 ~~~v~~~~~s~~~~~l~-~~~~---dg~i~iw~~~~~~~-~~~~~~~~--------h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLA-TCSS---DKTIKIFEVEGETH-KLIDTLTG--------HEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp CCCEEEEEECSSSSEEE-EEET---TSCEEEEEEETTEE-EEEEEECC--------CSSCEEEEEECCGGGCSEEEEEET
T ss_pred cccEEEEEEcCCCCEEE-EEEC---CCcEEEEecCCCcc-eeeeEecC--------CCCcEEEEEeCCCCCCCEEEEecc
Confidence 34566788888 54443 3322 47777776643211 11111111 111233455542 356666667
Q ss_pred CCcEEEEeCCCCCCC---ceecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEEcCCCCccccee
Q 006979 164 DQRLYKHSIDSKDSS---PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (623)
Q Consensus 164 ~~~l~~~d~~~g~~~---~~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~ 238 (623)
++.|.++|+.++ . ...+... ........|+|+ ++.++....+ ..|.++|+.++.......
T Consensus 78 dg~v~iwd~~~~--~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~ 142 (379)
T 3jrp_A 78 DGKVLIWKEENG--RWSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSD---------GKVSVVEFKENGTTSPII 142 (379)
T ss_dssp TSCEEEEEEETT--EEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEECCTTSCCCEEE
T ss_pred CCEEEEEEcCCC--ceeEeeeecCC----CcceEEEEeCCCCCCCEEEEecCC---------CcEEEEecCCCCceeeEE
Confidence 888999998865 3 1222221 344667889999 8888776554 568888988764211233
Q ss_pred cccCCCcccceeeCC-------------CCCEEEEEEecCCCCCCCceEEEEEEecCCCce-eeeEEEcCCCCCccccCc
Q 006979 239 LVSGSDFYAFPRMDP-------------RGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 239 l~~~~~~~~~p~wSP-------------DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 304 (623)
+...........|+| |++.|+....+. .|+++|+..+... .....+.+.. ..+.
T Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~~~~~~~h~----~~v~ 210 (379)
T 3jrp_A 143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--------LVKIWKYNSDAQTYVLESTLEGHS----DWVR 210 (379)
T ss_dssp EECCTTCEEEEEECCCC----------CTTCEEEEEETTS--------CEEEEEEETTTTEEEEEEEECCCS----SCEE
T ss_pred ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC--------eEEEEEecCCCcceeeEEEEeccc----CcEe
Confidence 334445566788999 799888766332 3888888765331 1222334433 4567
Q ss_pred CceeCCC---CcEEEEEeCCCCeeeEEEEecCCCe---EEEEee---cccccccccccccCcceeEEeecCCCCEEEEEE
Q 006979 305 EPKWSSK---GELFFVTDRKNGFWNLHKWIESNNE---VLAIYS---LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (623)
Q Consensus 305 ~~~ws~D---G~l~~~~~~~~g~~~L~~~d~~~~~---~~~l~~---~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~ 375 (623)
.+.|+|| +++++.... +|.-.|| |..+++ ...+.. ....+....|+ |+++.|+...
T Consensus 211 ~~~~sp~~~~~~~l~s~~~-dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~v~~~~~s------------~~g~~l~~~~ 275 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQ-DRTCIIW--TQDNEQGPWKKTLLKEEKFPDVLWRASWS------------LSGNVLALSG 275 (379)
T ss_dssp EEEECCCCSSSEEEEEEET-TSCEEEE--EESSTTSCCEEEESSSSCCSSCEEEEEEC------------SSSCCEEEEE
T ss_pred EEEECCCCCCCCeEEEEeC-CCEEEEE--eCCCCCccceeeeeccccCCCcEEEEEEc------------CCCCEEEEec
Confidence 8999999 775555554 4655555 444442 222221 11122222333 2666555444
Q ss_pred EECCeEEEEEEeCC
Q 006979 376 RQNGRSYLGILDDF 389 (623)
Q Consensus 376 ~~~g~~~L~~~d~~ 389 (623)
.+|.-++|.++..
T Consensus 276 -~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 276 -GDNKVTLWKENLE 288 (379)
T ss_dssp -SSSSEEEEEEEET
T ss_pred -CCCcEEEEeCCCC
Confidence 5788888877643
No 341
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.55 E-value=5.8e-07 Score=92.74 Aligned_cols=159 Identities=12% Similarity=0.045 Sum_probs=88.3
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ .++++...++.|.++++.++ ..+.+..-. ..........|+|+|++|+....+ ..|.+
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d---------~~v~v 81 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGN--GWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQD---------RNAYV 81 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETT--EEEECCCBC-CCSSCEEEEEECTTTCCEEEEETT---------SSEEE
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCC--ceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCC---------CeEEE
Confidence 344555554 44555556777888888754 212222210 113446678899999988876654 34777
Q ss_pred EEcCCCC-cccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcC-CCCCccccC
Q 006979 226 IALNGQN-IQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FDPTIVESP 303 (623)
Q Consensus 226 idl~~g~-~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~-~~~~~~~~~ 303 (623)
+|+.++. ......+......+....|+|||++|+....+. .|.++|++.+........+.+ .. ..+
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~~~~h~----~~v 149 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR--------VISVCYFEQENDWWVSKHLKRPLR----STI 149 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS--------CEEECCC-----CCCCEEECSSCC----SCE
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC--------eEEEEEECCcccceeeeEeecccC----CCe
Confidence 7877654 111333444444566788999999998776443 277778776531112334444 33 567
Q ss_pred cCceeCCCCcEEEEEeCCCCeeeEEEE
Q 006979 304 TEPKWSSKGELFFVTDRKNGFWNLHKW 330 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g~~~L~~~ 330 (623)
..+.|+|||++++.... ++.-.+|-+
T Consensus 150 ~~~~~~~~~~~l~~~~~-d~~i~iwd~ 175 (377)
T 3dwl_C 150 LSLDWHPNNVLLAAGCA-DRKAYVLSA 175 (377)
T ss_dssp EEEEECTTSSEEEEEES-SSCEEEEEE
T ss_pred EEEEEcCCCCEEEEEeC-CCEEEEEEE
Confidence 78999999995555444 455555544
No 342
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.55 E-value=1e-05 Score=82.52 Aligned_cols=156 Identities=12% Similarity=0.042 Sum_probs=96.1
Q ss_pred EEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 150 ~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
..+.++..+++...++.|.++|+.++ .....+... ........|+|+++.++....+ ..+.++|+.
T Consensus 149 ~~~~~~~~l~s~s~d~~i~~wd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~~l~sg~~d---------~~v~~wd~~ 214 (340)
T 1got_B 149 CRFLDDNQIVTSSGDTTCALWDIETG-QQTTTFTGH----TGDVMSLSLAPDTRLFVSGACD---------ASAKLWDVR 214 (340)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTT-EEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETT
T ss_pred EEECCCCcEEEEECCCcEEEEECCCC-cEEEEEcCC----CCceEEEEECCCCCEEEEEeCC---------CcEEEEECC
Confidence 33444433455557888999999876 223334322 2346678899999977765544 458888998
Q ss_pred CCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeC
Q 006979 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (623)
Q Consensus 230 ~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 309 (623)
++.. ...+......+...+|+|||++|+-...|. .|.++|+..+. ....+.... ....+....|+
T Consensus 215 ~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~--------~v~iwd~~~~~---~~~~~~~~~--~~~~v~~~~~s 279 (340)
T 1got_B 215 EGMC--RQTFTGHESDINAICFFPNGNAFATGSDDA--------TCRLFDLRADQ---ELMTYSHDN--IICGITSVSFS 279 (340)
T ss_dssp TCSE--EEEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE---EEEEECCTT--CCSCEEEEEEC
T ss_pred CCee--EEEEcCCcCCEEEEEEcCCCCEEEEEcCCC--------cEEEEECCCCc---EEEEEccCC--cccceEEEEEC
Confidence 8762 233443344466678999999888665332 38888987662 222222211 11345678999
Q ss_pred CCCcEEEEEeCCCCeeeEEEEecCCCeE
Q 006979 310 SKGELFFVTDRKNGFWNLHKWIESNNEV 337 (623)
Q Consensus 310 ~DG~l~~~~~~~~g~~~L~~~d~~~~~~ 337 (623)
|||++++.... ++. |..+|..+++.
T Consensus 280 ~~g~~l~~g~~-d~~--i~vwd~~~~~~ 304 (340)
T 1got_B 280 KSGRLLLAGYD-DFN--CNVWDALKADR 304 (340)
T ss_dssp TTSSEEEEEET-TSE--EEEEETTTCCE
T ss_pred CCCCEEEEECC-CCe--EEEEEcccCcE
Confidence 99996655554 454 55567666553
No 343
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=1.4e-06 Score=87.44 Aligned_cols=211 Identities=12% Similarity=0.106 Sum_probs=118.9
Q ss_pred CceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCE
Q 006979 178 SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGER 257 (623)
Q Consensus 178 ~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~ 257 (623)
..++|..+ ......+.|+|+|+.|+++.... ..|++++.+ ++ .+.+...........|+|||+
T Consensus 36 ~~~~l~~~----~~~~egp~~~~~g~~l~~~d~~~--------~~i~~~~~~-g~---~~~~~~~~~~~~gl~~d~dG~- 98 (305)
T 3dr2_A 36 RLLTLYDQ----ATWSEGPAWWEAQRTLVWSDLVG--------RRVLGWRED-GT---VDVLLDATAFTNGNAVDAQQR- 98 (305)
T ss_dssp CCEEEECC----CSSEEEEEEEGGGTEEEEEETTT--------TEEEEEETT-SC---EEEEEESCSCEEEEEECTTSC-
T ss_pred ceEEEecC----CcCccCCeEeCCCCEEEEEECCC--------CEEEEEeCC-CC---EEEEeCCCCccceeeECCCCC-
Confidence 56666654 22345689999999888875422 569999984 44 455555555566788999998
Q ss_pred EEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEe----C----------CCC
Q 006979 258 MAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD----R----------KNG 323 (623)
Q Consensus 258 la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~----~----------~~g 323 (623)
|+... .. ...|++++.++. ...+...........+..+.+++||++++... . ..+
T Consensus 99 l~v~~-~~------~~~v~~~~~~g~----~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~ 167 (305)
T 3dr2_A 99 LVHCE-HG------RRAITRSDADGQ----AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELA 167 (305)
T ss_dssp EEEEE-TT------TTEEEEECTTSC----EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSS
T ss_pred EEEEE-CC------CCEEEEECCCCC----EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccC
Confidence 54443 21 235888887522 22222111100002456789999998776411 0 012
Q ss_pred eeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC---CeEEEEEEeCCCCcee---ec-
Q 006979 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN---GRSYLGILDDFGHSLS---LL- 396 (623)
Q Consensus 324 ~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~---g~~~L~~~d~~~~~~~---~l- 396 (623)
...||++|+++++.+.+. .. ..+ +.+.+. ++++.||+..... +..+|++++++++.+. .+
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~~---~~p------~gl~~s---pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-DL---DHP------NGLAFS---PDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-EE---SSE------EEEEEC---TTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEcCCCCcEEEEe-cC---CCC------cceEEc---CCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 468999999888776664 21 111 123333 3888888776432 1357888887654321 11
Q ss_pred ccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 397 DIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 397 t~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.........+ +.+++ +++.. ...|++++.++..
T Consensus 235 ~~~~~~pdgi~~d~~G~-lwv~~-----~~gv~~~~~~g~~ 269 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGW-LWSSS-----GTGVCVFDSDGQL 269 (305)
T ss_dssp CCSSSCCCSEEECTTSC-EEECC-----SSEEEEECTTSCE
T ss_pred ECCCCCCCeEEECCCCC-EEEec-----CCcEEEECCCCCE
Confidence 1111122233 44454 44432 2358888875543
No 344
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.55 E-value=2.3e-05 Score=85.60 Aligned_cols=247 Identities=9% Similarity=-0.025 Sum_probs=135.9
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCC--CCCCCceecCCCCCCCCeeecceeeC----CCCCEEEEEEeccCCCCCCcee
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSID--SKDSSPLPITPDYGEPLVSYADGIFD----PRFNRYVTVREDRRQDALNSTT 221 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~--~g~~~~~~Lt~~~~~~~~~~~d~~~s----PdG~~l~~v~~~~~~~~~~~~~ 221 (623)
...+++| +.+|+...++.|+++|+. ++ .....+..+ ..-....+| |||++++...+.. +
T Consensus 201 ~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G-----~~P~~ia~s~~~~pDGk~l~v~n~~~--------~ 266 (567)
T 1qks_A 201 ISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG-----SEARSIETSKMEGWEDKYAIAGAYWP--------P 266 (567)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEET--------T
T ss_pred ceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC-----CCCceeEEccccCCCCCEEEEEEccC--------C
Confidence 3455655 444444567789999995 44 223344432 123457799 7999988876643 5
Q ss_pred EEEEEEcCCCCcccceecc-cCC-----C-----cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE
Q 006979 222 EIVAIALNGQNIQEPKVLV-SGS-----D-----FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV 290 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~-~~~-----~-----~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~ 290 (623)
.+.++|..+.+. +..+. .+. + .......|+++..+++.. .+ ..+|+++|......+....
T Consensus 267 ~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-~~------~g~v~~vd~~~~~~~~v~~ 337 (567)
T 1qks_A 267 QYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-KE------TGKILLVDYTDLNNLKTTE 337 (567)
T ss_dssp EEEEEETTTCCE--EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-TT------TTEEEEEETTCSSEEEEEE
T ss_pred eEEEEECCCCcE--EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe-cC------CCeEEEEecCCCccceeee
Confidence 688999887762 22222 110 1 122345788887655443 32 4579999987653211122
Q ss_pred EEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCE
Q 006979 291 CVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNL 370 (623)
Q Consensus 291 ~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~ 370 (623)
+.. . .......|+|||+.+++++. +...|..+|..+++.....+- ++..+.++. ...|. .|+++.
T Consensus 338 i~~--~----~~~~d~~~~pdgr~~~va~~--~sn~V~ViD~~t~kl~~~i~v----gg~~Phpg~-g~~~~--~p~~g~ 402 (567)
T 1qks_A 338 ISA--E----RFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDT----GGQTPHPGR-GANFV--HPTFGP 402 (567)
T ss_dssp EEC--C----SSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEEC----SSSSBCCTT-CEEEE--ETTTEE
T ss_pred eec--c----ccccCceECCCCCEEEEEeC--CCCeEEEEECCCCcEEEEEec----cCcCCCCcc-ceeeE--CCCCCc
Confidence 211 1 23456789999996666665 345688899999876544432 011111111 11122 125566
Q ss_pred EEEEEEECCeEEEEEEeCCCC--------ceeecccC-Ccce-EeeeecCCEEEEEEe-cCC--CCCeEEEEEcCCC
Q 006979 371 IACSYRQNGRSYLGILDDFGH--------SLSLLDIP-FTDI-DNITLGNDCLFVEGA-SGV--EPSSVAKVTLDDH 434 (623)
Q Consensus 371 l~~~~~~~g~~~L~~~d~~~~--------~~~~lt~~-~~~v-~~~~~~~~~~~~~~~-s~~--~~~~ly~~~l~~~ 434 (623)
++++. .-|...|.++|.+.+ .++.+... ...+ -...+++.++|+... ++. ....|.++|+++.
T Consensus 403 v~~t~-~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 403 VWATS-HMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEE-BSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEeC-CCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 65544 334445778887752 23444432 2211 122677777776542 221 1357889988765
No 345
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.54 E-value=7e-06 Score=82.17 Aligned_cols=260 Identities=12% Similarity=0.058 Sum_probs=134.7
Q ss_pred CCccCceEEcCCCcEEEE-------eecCCCCCceEEEEcCCCCCCCCcccCC-CCCccceeeeecCCceEEEeCC--EE
Q 006979 88 SKRLGGTAVDGHGRLIWL-------ESRPTEAGRGVLVKEPAKAGDEPSDITP-KEYAVRTTAQEYGGGAFRIFGD--TV 157 (623)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l-------~~~~~e~g~~~l~~~~~~~gg~~~~l~p-~~~~~r~~~~~~g~~~~~~s~d--~l 157 (623)
-..++.+.|++++.+|+. +.. ++ .|++++..++ +.+.+.. .... +........++++ .+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~---~~--~i~~~d~~~g-~~~~~~~~~~~~-----~~~~~~~i~~~~~~g~l 85 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKP---AG--EILRIDLKTG-KKTVICKPEVNG-----YGGIPAGCQCDRDANQL 85 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEE---CC--EEEEECTTTC-CEEEEECCEETT-----EECCEEEEEECSSSSEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCC---CC--EEEEEeCCCC-cEEEEEecccCC-----CCCCCceEEEecCCCcE
Confidence 345678899886688887 332 23 3666665433 3322221 0000 0011223445544 56
Q ss_pred EEEeCCCCcEEEEeCCCCCCCceec-CCCC-CCCCeeecceeeCCCCCEEEEEEeccC------CCCCCceeEEEEEEcC
Q 006979 158 IFSNYKDQRLYKHSIDSKDSSPLPI-TPDY-GEPLVSYADGIFDPRFNRYVTVREDRR------QDALNSTTEIVAIALN 229 (623)
Q Consensus 158 ~f~~~~~~~l~~~d~~~g~~~~~~L-t~~~-~~~~~~~~d~~~sPdG~~l~~v~~~~~------~~~~~~~~~L~~idl~ 229 (623)
++... .+.|++++.+ + ..+.+ .... ..+.....+..++|+|+.++....+.. .........|++++.+
T Consensus 86 ~v~~~-~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 86 FVADM-RLGLLVVQTD-G--TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEET-TTEEEEEETT-S--CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred EEEEC-CCCEEEEeCC-C--CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 66654 3369999988 6 55555 3221 111234567889999975544322100 0001123679999987
Q ss_pred CCCcccceecccCCCcccceeeC----CCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 230 GQNIQEPKVLVSGSDFYAFPRMD----PRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 230 ~g~~~~~~~l~~~~~~~~~p~wS----PDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
++ .+.+...........|+ |||+.|++.... ...|++++++..+.+.....+..........+..
T Consensus 162 -g~---~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 230 (314)
T 1pjx_A 162 -GQ---MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP-------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG 230 (314)
T ss_dssp -SC---EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT-------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE
T ss_pred -CC---EEEeccCCCCcceEEEecccCCCCCEEEEEECC-------CCeEEEEECCCCCccccceEEEECCCCCCCCCCc
Confidence 55 44443333334556799 999888766522 3458898887333222222222211000012456
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeE-EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
+.+++||++++.... ...|+++|+++++. ..+....... ..+.+. ++++.||++...+ ..|+
T Consensus 231 i~~d~~G~l~v~~~~---~~~i~~~d~~~g~~~~~~~~~~~~~---------~~i~~~---~dg~~l~v~~~~~--~~l~ 293 (314)
T 1pjx_A 231 MDFDEDNNLLVANWG---SSHIEVFGPDGGQPKMRIRCPFEKP---------SNLHFK---PQTKTIFVTEHEN--NAVW 293 (314)
T ss_dssp EEEBTTCCEEEEEET---TTEEEEECTTCBSCSEEEECSSSCE---------EEEEEC---TTSSEEEEEETTT--TEEE
T ss_pred eEECCCCCEEEEEcC---CCEEEEEcCCCCcEeEEEeCCCCCc---------eeEEEC---CCCCEEEEEeCCC--CeEE
Confidence 788999976554432 23688899885543 2232110111 122332 3666677766433 3577
Q ss_pred EEeCCC
Q 006979 385 ILDDFG 390 (623)
Q Consensus 385 ~~d~~~ 390 (623)
+++++.
T Consensus 294 ~~~~~~ 299 (314)
T 1pjx_A 294 KFEWQR 299 (314)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 888764
No 346
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.5e-08 Score=98.21 Aligned_cols=117 Identities=16% Similarity=0.055 Sum_probs=71.8
Q ss_pred CCCCEEEEecCCCCCcccC--cCCHHhHHHHcCceEEEEECCCCCCC-------Cchh-HH---H-hhccCC----ccch
Q 006979 493 EKPPLLVKSHGGPTSEARG--ILNLSIQYWTSRGWAFVDVNYGGSTG-------YGRE-FR---E-RLLGRW----GIVD 554 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~--~~~~~~~~~a~~G~~v~~~d~rGs~~-------~g~~-~~---~-~~~~~~----g~~~ 554 (623)
.+.|.||++||........ .+....+.|.++||.|+.+|+++... ++.. +. . .....| ...+
T Consensus 3 ~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred CcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 3468999999984433211 12245667777899999999993211 0000 00 0 000111 1123
Q ss_pred HHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCC------CceeEEEecccCCC
Q 006979 555 VNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFR------DTFKAGASLYGVSI 609 (623)
Q Consensus 555 ~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~------~~f~a~v~~~g~~d 609 (623)
..|+.+++++|.+....+..+|+|+|+|+||.+++.++ .++ ..+++++..+|...
T Consensus 83 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~ 144 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSF 144 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCC
T ss_pred hhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCC
Confidence 45677777777654333457899999999999999988 432 35778888877653
No 347
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.54 E-value=1.1e-05 Score=83.45 Aligned_cols=154 Identities=10% Similarity=0.057 Sum_probs=98.0
Q ss_pred CceEEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCC-CCCEEEEEEeccCCCCCCceeEE
Q 006979 147 GGAFRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 147 ~~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~~~~~~~~L 223 (623)
+.+..++++ .++++...++.|.++|+.++ .....+... ..........|+| +++.|+....+ ..|
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d---------~~i 143 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-NKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSIR---------GAT 143 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTST-TCEEEECCC--STTCBEEEEEEETTEEEEEEEEETT---------TEE
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-ccceeeecC--CcCCceeEEEeCCCCCCEEEEEeCC---------CEE
Confidence 345556655 36666667888999999876 223333311 0134567788999 56666555443 568
Q ss_pred EEEEcCCCCcccceecccCC---CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 224 VAIALNGQNIQEPKVLVSGS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~---~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
.++|+.+.. ...+.... ..+....|+|||+.|+....+ ..|+++|+.+. ....+.+..
T Consensus 144 ~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~----~~~~~~~h~---- 204 (383)
T 3ei3_B 144 TLRDFSGSV---IQVFAKTDSWDYWYCCVDVSVSRQMLATGDST--------GRLLLLGLDGH----EIFKEKLHK---- 204 (383)
T ss_dssp EEEETTSCE---EEEEECCCCSSCCEEEEEEETTTTEEEEEETT--------SEEEEEETTSC----EEEEEECSS----
T ss_pred EEEECCCCc---eEEEeccCCCCCCeEEEEECCCCCEEEEECCC--------CCEEEEECCCC----EEEEeccCC----
Confidence 888998765 44443332 345567899999988766532 35888898533 333444444
Q ss_pred ccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCC
Q 006979 301 ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESN 334 (623)
Q Consensus 301 ~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~ 334 (623)
..+..+.|+|+++ +++.... ++. |..+|+.+
T Consensus 205 ~~v~~~~~~~~~~~~l~s~~~-d~~--i~iwd~~~ 236 (383)
T 3ei3_B 205 AKVTHAEFNPRCDWLMATSSV-DAT--VKLWDLRN 236 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEET-TSE--EEEEEGGG
T ss_pred CcEEEEEECCCCCCEEEEEeC-CCE--EEEEeCCC
Confidence 4677899999998 7776665 454 45556654
No 348
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.53 E-value=3.9e-06 Score=86.68 Aligned_cols=160 Identities=11% Similarity=-0.027 Sum_probs=97.7
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.++++| .++.+. .++.+.+++..++ ......+.. .....+...+|+|||+.++....+.... ..++.
T Consensus 179 V~~v~fspdg~~l~s~-s~~~~~~~~~~~~-~~~~~~~~~--~~~~~v~~v~fspdg~~l~~~s~d~~~~-----~~i~~ 249 (365)
T 4h5i_A 179 VKDLHFSTDGKVVAYI-TGSSLEVISTVTG-SCIARKTDF--DKNWSLSKINFIADDTVLIAASLKKGKG-----IVLTK 249 (365)
T ss_dssp CCEEEECTTSSEEEEE-CSSCEEEEETTTC-CEEEEECCC--CTTEEEEEEEEEETTEEEEEEEESSSCC-----EEEEE
T ss_pred eEEEEEccCCceEEec-cceeEEEEEeccC-cceeeeecC--CCCCCEEEEEEcCCCCEEEEEecCCcce-----eEEee
Confidence 456677776 344443 3445777877665 122222221 1235567788999999988877654322 45777
Q ss_pred EEcCCCCcc--cceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE-EEcCCCCCcccc
Q 006979 226 IALNGQNIQ--EPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV-CVAGFDPTIVES 302 (623)
Q Consensus 226 idl~~g~~~--~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~-~~~~~~~~~~~~ 302 (623)
+++..+... ....+......+...+|||||++||....|. .|.++|+.++. ... ++.+.. ..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~--------~V~iwd~~~~~---~~~~~~~gH~----~~ 314 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN--------SIALVKLKDLS---MSKIFKQAHS----FA 314 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS--------CEEEEETTTTE---EEEEETTSSS----SC
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC--------EEEEEECCCCc---EEEEecCccc----CC
Confidence 777655310 0122333334456678999999998776443 28888988762 222 234444 56
Q ss_pred CcCceeCCCCcEEEEEeCCCCeeeEEEEe
Q 006979 303 PTEPKWSSKGELFFVTDRKNGFWNLHKWI 331 (623)
Q Consensus 303 ~~~~~ws~DG~l~~~~~~~~g~~~L~~~d 331 (623)
+...+|+|||+++..... ++.-+||.+.
T Consensus 315 V~~v~fSpdg~~laS~S~-D~tvrvw~ip 342 (365)
T 4h5i_A 315 ITEVTISPDSTYVASVSA-ANTIHIIKLP 342 (365)
T ss_dssp EEEEEECTTSCEEEEEET-TSEEEEEECC
T ss_pred EEEEEECCCCCEEEEEeC-CCeEEEEEcC
Confidence 788999999995555444 5777777654
No 349
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.53 E-value=2.1e-05 Score=82.51 Aligned_cols=209 Identities=11% Similarity=0.045 Sum_probs=117.6
Q ss_pred EEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 150 FRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 150 ~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
.+++++ .|++++..++.|+++|++++ ..+.+... ...-. +.|+|+|+.|+++..+.. ..|++++.
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g--~~~~~~~~----~~~~~-ia~~~~g~~l~~~d~~~~-------~~I~~~d~ 201 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDN--KVTTVHPG----FKGGK-PAVTKDKQRVYSIGWEGT-------HTVYVYMK 201 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTT--EEEEEEET----CCBCB-CEECTTSSEEEEEBSSTT-------CEEEEEEG
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCC--EEEEeecc----CCCCc-eeEecCCCcEEEEecCCC-------ceEEEEEc
Confidence 445444 78888877788999999876 44444332 11122 889999998776544221 37999999
Q ss_pred CCCCcccceec----ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE----cCCCCCcc
Q 006979 229 NGQNIQEPKVL----VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV----AGFDPTIV 300 (623)
Q Consensus 229 ~~g~~~~~~~l----~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~----~~~~~~~~ 300 (623)
+++.. .+.+ ..........+++|++.+|++. +. ...|++++.+++. ..++ ......
T Consensus 202 ~~~~~--~~~~g~~~~~~~~~p~~iav~p~~g~lyv~--d~------~~~I~~~d~~~~~----~~~~~~~~~~g~~~-- 265 (409)
T 3hrp_A 202 ASGWA--PTRIGQLGSTFSGKIGAVALDETEEWLYFV--DS------NKNFGRFNVKTQE----VTLIKQLELSGSLG-- 265 (409)
T ss_dssp GGTTC--EEEEEECCTTSCSCCCBCEECTTSSEEEEE--CT------TCEEEEEETTTCC----EEEEEECCCCSCCC--
T ss_pred CCCce--eEEeeeccchhcCCcEEEEEeCCCCeEEEE--EC------CCcEEEEECCCCC----EEEEecccccCCCC--
Confidence 87651 2233 2122334556799976778774 32 2369999987662 2222 111101
Q ss_pred ccCc-CceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecc--ccccc-c---cccccCcceeEEeecCCCCEEEE
Q 006979 301 ESPT-EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD--AEFSR-P---LWVFGINSYEIIQSHGEKNLIAC 373 (623)
Q Consensus 301 ~~~~-~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~--~~~~~-~---~w~~~~~~~~~l~~s~~~~~l~~ 373 (623)
..+. .+.|+|++..+|+++. +...|+++++++. ...+.... ..... + .-......+.+. ++++ ||+
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~--~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d---~dG~-lyv 338 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQ--NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVD---EDGN-FYI 338 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEET--TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC---TTCC-EEE
T ss_pred CCccccEEEeCCCCEEEEEeC--CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe---CCCC-EEE
Confidence 1112 7889996554445665 4457999988654 33333211 00000 0 000111234443 2554 666
Q ss_pred EEEEC-CeEEEEEEeCCCCceeecc
Q 006979 374 SYRQN-GRSYLGILDDFGHSLSLLD 397 (623)
Q Consensus 374 ~~~~~-g~~~L~~~d~~~~~~~~lt 397 (623)
+. . +..+|.++++.++.+..+.
T Consensus 339 ad--~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 339 VD--GFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EE--TTTTCEEEEEETTTTEEEEEE
T ss_pred Ee--CCCCCEEEEEECCCCEEEEEe
Confidence 54 4 5567888997677766554
No 350
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.53 E-value=1.4e-05 Score=81.18 Aligned_cols=151 Identities=11% Similarity=0.044 Sum_probs=91.6
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeeccee----eCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGI----FDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~----~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g 231 (623)
..+++...++.|.++|+.++......+....+.......... |+|+++.++....+ ..|.++|+.++
T Consensus 130 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~ 200 (357)
T 3i2n_A 130 PEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN---------GDIKLFDLRNM 200 (357)
T ss_dssp CEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT---------SEEEEEETTTT
T ss_pred cEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC---------CeEEEEECccC
Confidence 355566678889999998761123444332111111233333 88999988776543 56999999988
Q ss_pred CcccceecccCCCcccceeeCC---CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE--EEcCCCCCccccCcCc
Q 006979 232 NIQEPKVLVSGSDFYAFPRMDP---RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV--CVAGFDPTIVESPTEP 306 (623)
Q Consensus 232 ~~~~~~~l~~~~~~~~~p~wSP---DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 306 (623)
+ ...............|+| ||++|+....+ ..|.++|+..+..+.... ...+.. ..+...
T Consensus 201 ~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~----~~v~~~ 265 (357)
T 3i2n_A 201 A---LRWETNIKNGVCSLEFDRKDISMNKLVATSLE--------GKFHVFDMRTQHPTKGFASVSEKAHK----STVWQV 265 (357)
T ss_dssp E---EEEEEECSSCEEEEEESCSSSSCCEEEEEEST--------TEEEEEEEEEEETTTEEEEEEEECCS----SCEEEE
T ss_pred c---eeeecCCCCceEEEEcCCCCCCCCEEEEECCC--------CeEEEEeCcCCCcccceeeeccCCCc----CCEEEE
Confidence 6 433333344556688999 99988876533 347888877653211111 122333 467788
Q ss_pred eeCCCCc-EEEEEeCCCCeeeEEEEe
Q 006979 307 KWSSKGE-LFFVTDRKNGFWNLHKWI 331 (623)
Q Consensus 307 ~ws~DG~-l~~~~~~~~g~~~L~~~d 331 (623)
.|+|||+ +++.... +|.-.+|.++
T Consensus 266 ~~~~~~~~~l~~~~~-dg~i~iwd~~ 290 (357)
T 3i2n_A 266 RHLPQNRELFLTAGG-AGGLHLWKYE 290 (357)
T ss_dssp EEETTEEEEEEEEET-TSEEEEEEEE
T ss_pred EECCCCCcEEEEEeC-CCcEEEeecC
Confidence 9999998 6666655 5666666554
No 351
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.53 E-value=5.8e-06 Score=84.71 Aligned_cols=241 Identities=10% Similarity=0.004 Sum_probs=130.7
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCC-CCceecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKD-SSPLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~-~~~~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~ 222 (623)
+.+.+++++ ..+++...++.|.++++..+. .....+... ........|+|+ +++|+....+ ..
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~~~d---------g~ 80 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GK 80 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SC
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC----CCcEEEEEeCCCCCCCEEEEeccC---------CE
Confidence 445566655 455555567888888886320 112233322 334567889987 8888776554 44
Q ss_pred EEEEEcCCCCcccceecccCCCcccceeeCCC--CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 223 IVAIALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 223 L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPD--G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
|.++|+.+++......+......+....|+|+ |+.|+....+ ..|.++|+...... ....+.+..
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~-~~~~~~~~~---- 147 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTT-SPIIIDAHA---- 147 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECCTTSCC-CEEEEECCT----
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC--------CcEEEEecCCCCce-eeEEecCCC----
Confidence 77788877742113334434445667889999 9988877633 34888898776321 222333433
Q ss_pred ccCcCceeCC-------------CCcEEEEEeCCCCeeeEEEEecCCCe--EEEEe---ecccccccccccccCcceeEE
Q 006979 301 ESPTEPKWSS-------------KGELFFVTDRKNGFWNLHKWIESNNE--VLAIY---SLDAEFSRPLWVFGINSYEII 362 (623)
Q Consensus 301 ~~~~~~~ws~-------------DG~l~~~~~~~~g~~~L~~~d~~~~~--~~~l~---~~~~~~~~~~w~~~~~~~~~l 362 (623)
..+..+.|+| |+++++.... ++.-.+| |..+++ ...+. .....+....|.+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~--d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-------- 216 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIW--KYNSDAQTYVLESTLEGHSDWVRDVAWSP-------- 216 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEET-TSCEEEE--EEETTTTEEEEEEEECCCSSCEEEEEECC--------
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEE--EecCCCcceeeEEEEecccCcEeEEEECC--------
Confidence 4567889999 6775555544 4554554 444332 22221 1222233333332
Q ss_pred eecCCC--CEEEEEEEECCeEEEEEEeCCCCc-e-eeccc--CCcceEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 363 QSHGEK--NLIACSYRQNGRSYLGILDDFGHS-L-SLLDI--PFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 363 ~~s~~~--~~l~~~~~~~g~~~L~~~d~~~~~-~-~~lt~--~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
++ +.++++...+|.-+||-++..... . ..+.. ....+..+ ++++..++.... . ..|+.+++.
T Consensus 217 ----~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--d--g~i~iw~~~ 286 (379)
T 3jrp_A 217 ----TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--D--NKVTLWKEN 286 (379)
T ss_dssp ----CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES--S--SSEEEEEEE
T ss_pred ----CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC--C--CcEEEEeCC
Confidence 53 566666667777666655432211 1 22222 22334444 566665554433 2 334555544
No 352
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.52 E-value=2.6e-05 Score=82.12 Aligned_cols=119 Identities=10% Similarity=0.162 Sum_probs=70.8
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC-CCccccee-------cccCCCcccceeeCCCC-CEEEEEE
Q 006979 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQEPKV-------LVSGSDFYAFPRMDPRG-ERMAWIE 262 (623)
Q Consensus 192 ~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~-g~~~~~~~-------l~~~~~~~~~p~wSPDG-~~la~~~ 262 (623)
......|+|+|+.|+.. .+ ..|.++|+.. +.. ... +......+...+|+||| +.|+...
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d---------~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DD---------LRINLWHLEITDRS--FNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CS---------SEEEEEETTEEEEE--EEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEEcCCCCEEEEe-CC---------CeEEEEECCCCCce--eeeeecccccccccCcceEEEEECCCCCcEEEEEe
Confidence 45678899999988764 32 5688888873 321 111 22333445678899999 7777665
Q ss_pred ecCCCCCCCceEEEEEEecCCCce-eeeEEEcCCCCC--------ccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecC
Q 006979 263 WHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPT--------IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (623)
Q Consensus 263 ~~~~~~p~~~~~L~v~d~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~ 333 (623)
.+. .|.++|+..+... .....+.+.... ....+..+.|+|||++++.... ..|..+|..
T Consensus 247 ~dg--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~iwd~~ 314 (447)
T 3dw8_B 247 SKG--------TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVKVWDLN 314 (447)
T ss_dssp TTS--------CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEEEEETT
T ss_pred CCC--------eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC----CeEEEEeCC
Confidence 332 3888898776310 012344443200 0015678899999985554433 356666765
Q ss_pred C
Q 006979 334 N 334 (623)
Q Consensus 334 ~ 334 (623)
.
T Consensus 315 ~ 315 (447)
T 3dw8_B 315 M 315 (447)
T ss_dssp C
T ss_pred C
Confidence 4
No 353
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.52 E-value=8.5e-06 Score=86.07 Aligned_cols=257 Identities=9% Similarity=0.048 Sum_probs=140.4
Q ss_pred ccCCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCC-CccceeeeecCCceEEEeCC-E-EEEEe
Q 006979 86 GASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YAVRTTAQEYGGGAFRIFGD-T-VIFSN 161 (623)
Q Consensus 86 ~~~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~-~~~r~~~~~~g~~~~~~s~d-~-l~f~~ 161 (623)
.....+..++++| ++.++..-.. +|...+|...... ......... ....-..|...+.+..++++ . ++++.
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~---dg~V~vwd~~~~~--~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTP---SSDVLVFDYTKHP--SKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECS---SSCEEEEEGGGSC--SSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECC---CCcEEEEECCCcc--cccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3445677888887 4555555432 5777778765320 000000000 00011112233456677665 3 77777
Q ss_pred CCCCcEEEEeCCCCCCC------ceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc-c
Q 006979 162 YKDQRLYKHSIDSKDSS------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-Q 234 (623)
Q Consensus 162 ~~~~~l~~~d~~~g~~~------~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~-~ 234 (623)
..++.|.++++.++... ...+... .....+..|+|++..++++.... ..|.++|+.++.. .
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~s~~~d--------g~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGH----TAVVEDVAWHLLHESLFGSVADD--------QKLMIWDTRNNNTSK 268 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCC----SSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCSCSSS
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCC----CCCEeeeEEeCCCCCEEEEEeCC--------CeEEEEECCCCCCCc
Confidence 78889999999863111 1122221 23466788999544444444322 6799999987621 1
Q ss_pred cceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-
Q 006979 235 EPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE- 313 (623)
Q Consensus 235 ~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~- 313 (623)
....+......+....|+|+|++++++... ...|.++|+..... ....+.... ..+..+.|+|+|+
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~-------dg~v~vwd~~~~~~--~~~~~~~h~----~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSA-------DKTVALWDLRNLKL--KLHSFESHK----DEIFQVQWSPHNET 335 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEET-------TSEEEEEETTCTTS--CSEEEECCS----SCEEEEEECSSCTT
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeC-------CCeEEEEeCCCCCC--CeEEeecCC----CCEEEEEECCCCCC
Confidence 133333333445667899999976655533 23588999886432 233344443 4677899999997
Q ss_pred EEEEEeCCCCeeeEEEEecCCCe------------EEEEe---ecccccccccccccCcceeEEeecCCCCEEEEEEEEC
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNE------------VLAIY---SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~------------~~~l~---~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~ 378 (623)
+++.... ++.-.|| |+.... .+.+. .....+.. +.|. |+++.++++...+
T Consensus 336 ~l~s~~~-d~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---------~~~~---p~~~~~l~s~s~d 400 (430)
T 2xyi_A 336 ILASSGT-DRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD---------FSWN---PNEPWIICSVSED 400 (430)
T ss_dssp EEEEEET-TSCCEEE--EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE---------EEEC---SSSTTEEEEEETT
T ss_pred EEEEEeC-CCcEEEE--eCCCCccccCccccccCCcceEEEcCCCCCCceE---------EEEC---CCCCCEEEEEECC
Confidence 6666655 5555555 443311 01111 11111222 2332 3777677777778
Q ss_pred CeEEEEEEe
Q 006979 379 GRSYLGILD 387 (623)
Q Consensus 379 g~~~L~~~d 387 (623)
|.-+||.++
T Consensus 401 g~i~iw~~~ 409 (430)
T 2xyi_A 401 NIMQVWQMA 409 (430)
T ss_dssp SEEEEEEEC
T ss_pred CCEEEeEcc
Confidence 887887664
No 354
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.52 E-value=3.1e-05 Score=78.87 Aligned_cols=150 Identities=13% Similarity=0.114 Sum_probs=91.4
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ .++++...++.|.++|+.++ .....+... ........|+|+|++|+....+ ..|.+
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~h----~~~v~~v~~sp~~~~l~s~~~d---------~~i~~ 144 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTG-TTYKRFVGH----QSEVYSVAFSPDNRQILSAGAE---------REIKL 144 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSS-CEEEEEECC----CSCEEEEEECSSTTEEEEEETT---------SCEEE
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCC-cEEEEEcCC----CCcEEEEEECCCCCEEEEEcCC---------CEEEE
Confidence 445566655 56667777888999999876 223344432 2346678899999988776554 44777
Q ss_pred EEcCCCCcccceecc---cCCCcccceeeCCCC----------CEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE
Q 006979 226 IALNGQNIQEPKVLV---SGSDFYAFPRMDPRG----------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV 292 (623)
Q Consensus 226 idl~~g~~~~~~~l~---~~~~~~~~p~wSPDG----------~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~ 292 (623)
+|+.+.. ...+. ...+.+...+|+|++ .+|+-...+ ..|.++|.... ....+
T Consensus 145 wd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~----~~~~~ 209 (343)
T 2xzm_R 145 WNILGEC---KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD--------GRLKVWNTNFQ----IRYTF 209 (343)
T ss_dssp EESSSCE---EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT--------SEEEEEETTTE----EEEEE
T ss_pred EeccCCc---eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC--------CEEEEEcCCCc----eeEEE
Confidence 7887543 22222 222345566789887 566655433 24777774321 33334
Q ss_pred cCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEec
Q 006979 293 AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (623)
Q Consensus 293 ~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~ 332 (623)
.+.. ..+....|+|||++++.... ++.-. .+|+
T Consensus 210 ~~h~----~~v~~~~~s~~g~~l~sgs~-dg~v~--iwd~ 242 (343)
T 2xzm_R 210 KAHE----SNVNHLSISPNGKYIATGGK-DKKLL--IWDI 242 (343)
T ss_dssp ECCS----SCEEEEEECTTSSEEEEEET-TCEEE--EEES
T ss_pred cCcc----ccceEEEECCCCCEEEEEcC-CCeEE--EEEC
Confidence 4444 45678899999995555544 45444 4555
No 355
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=98.51 E-value=3.6e-07 Score=88.95 Aligned_cols=125 Identities=11% Similarity=0.016 Sum_probs=75.1
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCcCCHHhHHHHc--CceEEEEECCCCCCC------CchhHHHh-
Q 006979 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGGSTG------YGREFRER- 545 (623)
Q Consensus 475 i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~--~G~~v~~~d~rGs~~------~g~~~~~~- 545 (623)
+...++.|+. +..++||++||.+ .....+...+++|.. .++.++.|+-+-... .+..|...
T Consensus 25 l~y~ii~P~~--------~~~~~VI~LHG~G--~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~ 94 (246)
T 4f21_A 25 MNYELMEPAK--------QARFCVIWLHGLG--ADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIK 94 (246)
T ss_dssp CCEEEECCSS--------CCCEEEEEEEC----CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCC
T ss_pred cCceEeCCCC--------cCCeEEEEEcCCC--CCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccc
Confidence 4556777864 3457999999973 333455555666643 378889887432110 01111110
Q ss_pred ------hccCCccchHHHHH----HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCH
Q 006979 546 ------LLGRWGIVDVNDCC----SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIP 610 (623)
Q Consensus 546 ------~~~~~g~~~~~D~~----~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~ 610 (623)
.....-...+.... ..++...+. .+|++||++.|+|+||.+++.++ ++|+.|+++|+++|....
T Consensus 95 ~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~ 169 (246)
T 4f21_A 95 SLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPA 169 (246)
T ss_dssp CC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTT
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCc
Confidence 00000011122222 333333344 48999999999999999999999 889999999999997543
No 356
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.51 E-value=2.3e-05 Score=86.09 Aligned_cols=284 Identities=7% Similarity=-0.025 Sum_probs=152.0
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCC-CCcccCCCCCccceeeeecC-CceEEEeC--C-EEEEEeC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGD-EPSDITPKEYAVRTTAQEYG-GGAFRIFG--D-TVIFSNY 162 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg-~~~~l~p~~~~~r~~~~~~g-~~~~~~s~--d-~l~f~~~ 162 (623)
..+..+.|+| ++.+.+.. ++...+|........ +....+.. |... +.+.++++ + ..+++..
T Consensus 19 ~~v~~~~~spdg~~l~~~~-----~~~v~v~~~~~~~~~~~~~~~~~~--------h~~~~v~~~~~sp~~~~~~l~s~~ 85 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-----GKSAFVRCLDDGDSKVPPVVQFTG--------HGSSVVTTVKFSPIKGSQYLCSGD 85 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-----TTEEEEEECCSSCCSSCSEEEECT--------TTTSCEEEEEECSSTTCCEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-----CCeEEEEECCCCCCccccceEEec--------CCCceEEEEEECcCCCCCEEEEec
Confidence 3466889999 66666654 356566655421000 11111111 1222 44566666 5 5556666
Q ss_pred CCCcEEEEeCCCC------C-CCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 163 KDQRLYKHSIDSK------D-SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 163 ~~~~l~~~d~~~g------~-~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.++.|.++|+.++ . .....+... ........|+|+|++|+....+... ...|+++|. ++.
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~~~~~-----~~~v~~~d~--~~~-- 152 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNVKSEFQVL----AGPISDISWDFEGRRLCVVGEGRDN-----FGVFISWDS--GNS-- 152 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEEEEEEECC----SSCEEEEEECTTSSEEEEEECCSSC-----SEEEEETTT--CCE--
T ss_pred CCCEEEEEeCCCCcccccccccccchhhcc----cccEEEEEEeCCCCEEEEeccCCCC-----ccEEEEEEC--CCc--
Confidence 7888888888532 0 012222221 2346678899999999887664322 256787773 321
Q ss_pred ceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccc---cCcCceeCCC-
Q 006979 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE---SPTEPKWSSK- 311 (623)
Q Consensus 236 ~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ws~D- 311 (623)
...+......+....|+|||+++++.... ...|.++|+..+. ....+.+.. . .+....|+||
T Consensus 153 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------d~~v~vwd~~~~~---~~~~~~~~~----~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 153 LGEVSGHSQRINACHLKQSRPMRSMTVGD-------DGSVVFYQGPPFK---FSASDRTHH----KQGSFVRDVEFSPDS 218 (615)
T ss_dssp EEECCSCSSCEEEEEECSSSSCEEEEEET-------TTEEEEEETTTBE---EEEEECSSS----CTTCCEEEEEECSTT
T ss_pred ceeeecCCccEEEEEECCCCCcEEEEEeC-------CCcEEEEeCCCcc---eeeeecccC----CCCceEEEEEECCCC
Confidence 44555545556678899999844444322 2348888877652 333444433 3 5678899999
Q ss_pred CcEEEEEeCCCCeeeEEEEecCCCeEEEEe-----ecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 312 GELFFVTDRKNGFWNLHKWIESNNEVLAIY-----SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 312 G~l~~~~~~~~g~~~L~~~d~~~~~~~~l~-----~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
|++++.... ++ .|..+|+.+++..... .....+.. +.+ + +++.+ ++...++. |.++
T Consensus 219 ~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~---------~~~---~-~~~~l-~~~~~d~~--i~~w 279 (615)
T 1pgu_A 219 GEFVITVGS-DR--KISCFDGKSGEFLKYIEDDQEPVQGGIFA---------LSW---L-DSQKF-ATVGADAT--IRVW 279 (615)
T ss_dssp CCEEEEEET-TC--CEEEEETTTCCEEEECCBTTBCCCSCEEE---------EEE---S-SSSEE-EEEETTSE--EEEE
T ss_pred CCEEEEEeC-CC--eEEEEECCCCCEeEEecccccccCCceEE---------EEE---c-CCCEE-EEEcCCCc--EEEE
Confidence 885555544 34 4666777776644333 11111221 222 1 44444 44444554 4455
Q ss_pred eCCCCcee-ecccCC----cceEee-eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 387 DDFGHSLS-LLDIPF----TDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 387 d~~~~~~~-~lt~~~----~~v~~~-~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
|+.+++.. .+.... ..+..+ .++++.++.... ...++.+++..++
T Consensus 280 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 280 DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL----DGTLNFYELGHDE 330 (615)
T ss_dssp ETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET----TSCEEEEETTEEE
T ss_pred ECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC----CCCEEEEECCCCc
Confidence 77665543 333321 122233 345665544332 2456777766543
No 357
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.50 E-value=1.5e-05 Score=81.21 Aligned_cols=265 Identities=11% Similarity=0.017 Sum_probs=140.0
Q ss_pred CCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCc
Q 006979 88 SKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (623)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~ 166 (623)
...+..+.|+|++.+...-.. +|...+|..... +....++.. ...+.+..++++ ..+++...++.
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~---Dg~v~iWd~~~~---~~~~~~~~~--------~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQ---DGKLIIWDSYTT---NKVHAIPLR--------SSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEET---TTEEEEEETTTC---CEEEEEECS--------SSCEEEEEECTTSSEEEEEETTCE
T ss_pred CCceEEEEECCCCCEEEEEeC---CCcEEEEECCCC---CcceEeecC--------CccEEEEEECCCCCEEEEEeCCCe
Confidence 345667888884444444333 477777754322 222212111 111334455554 45556667788
Q ss_pred EEEEeCCCCCCCce---ecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCC
Q 006979 167 LYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS 243 (623)
Q Consensus 167 l~~~d~~~g~~~~~---~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~ 243 (623)
+.++++.++....+ .+... ........|+|+++ ++....+ ..+.++|+.+++. ...+....
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~-l~s~s~d---------~~i~~wd~~~~~~--~~~~~~h~ 184 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGH----TGYLSCCRFLDDNQ-IVTSSGD---------TTCALWDIETGQQ--TTTFTGHT 184 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECC----SSCEEEEEEEETTE-EEEEETT---------SCEEEEETTTTEE--EEEECCCS
T ss_pred EEEEECccCCCcceeEEEecCC----CccEEEEEECCCCc-EEEEECC---------CcEEEEECCCCcE--EEEEcCCC
Confidence 99999876411111 12211 22345567888875 4443332 4588889988762 23344333
Q ss_pred CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCC
Q 006979 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (623)
Q Consensus 244 ~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g 323 (623)
..+....|+|||+.|+-...|. .|.++|+..+. ....+.+.. ..+....|+|||++++.... ++
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~~~---~~~~~~~h~----~~v~~v~~~p~~~~l~s~s~-d~ 248 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDA--------SAKLWDVREGM---CRQTFTGHE----SDINAICFFPNGNAFATGSD-DA 248 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCS---EEEEECCCS----SCEEEEEECTTSSEEEEEET-TS
T ss_pred CceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCe---eEEEEcCCc----CCEEEEEEcCCCCEEEEEcC-CC
Confidence 4456678999999777555332 37888987763 334455444 45678899999995555544 45
Q ss_pred eeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce-eecccCCcc
Q 006979 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLLDIPFTD 402 (623)
Q Consensus 324 ~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~-~~lt~~~~~ 402 (623)
. |..+|..+++........... .....+.|. |+++.+ ++...++. |.++|..+++. ..+......
T Consensus 249 ~--v~iwd~~~~~~~~~~~~~~~~------~~v~~~~~s---~~g~~l-~~g~~d~~--i~vwd~~~~~~~~~~~~h~~~ 314 (340)
T 1got_B 249 T--CRLFDLRADQELMTYSHDNII------CGITSVSFS---KSGRLL-LAGYDDFN--CNVWDALKADRAGVLAGHDNR 314 (340)
T ss_dssp C--EEEEETTTTEEEEEECCTTCC------SCEEEEEEC---TTSSEE-EEEETTSE--EEEEETTTCCEEEEEECCSSC
T ss_pred c--EEEEECCCCcEEEEEccCCcc------cceEEEEEC---CCCCEE-EEECCCCe--EEEEEcccCcEeeEeecCCCc
Confidence 4 445576666533222211100 011223333 266544 44545665 44557655543 344443444
Q ss_pred eEee--eecCCE
Q 006979 403 IDNI--TLGNDC 412 (623)
Q Consensus 403 v~~~--~~~~~~ 412 (623)
+..+ ++++..
T Consensus 315 v~~~~~s~dg~~ 326 (340)
T 1got_B 315 VSCLGVTDDGMA 326 (340)
T ss_dssp EEEEEECTTSSC
T ss_pred EEEEEEcCCCCE
Confidence 5544 444443
No 358
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.50 E-value=1.1e-07 Score=100.54 Aligned_cols=110 Identities=11% Similarity=-0.029 Sum_probs=72.6
Q ss_pred CCCCEEEEecCCCCCcccCcCCH-HhHHHHc-CceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNL-SIQYWTS-RGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~-~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
...|+||++||..... ...|.. ....+.+ .+|.|+++|+||.+... +...... -....+|+.+.+++|.++-.
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~~~--~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAANN--VRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHHHH--HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 3468999999985332 113333 3444555 48999999999854321 2111100 01124567777888864323
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.+++.|+|||+||++++.++ .+|+ ++.++...|..
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 5678999999999999999999 7788 88888776643
No 359
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.50 E-value=1.8e-05 Score=82.42 Aligned_cols=115 Identities=12% Similarity=0.071 Sum_probs=74.5
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCc
Q 006979 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 272 (623)
Q Consensus 193 ~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~ 272 (623)
.....|+|||++|+....+ ..|.++|+.+++. ...+......+....|+|||++|+....|
T Consensus 126 v~~v~~s~dg~~l~s~~~d---------~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-------- 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAED---------RLIRIWDIENRKI--VMILQGHEQDIYSLDYFPSGDKLVSGSGD-------- 186 (393)
T ss_dssp EEEEEECTTSSEEEEEETT---------SCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETT--------
T ss_pred EEEEEECCCCCEEEEEcCC---------CeEEEEECCCCcE--EEEEccCCCCEEEEEEcCCCCEEEEecCC--------
Confidence 4578899999988876554 4588889988762 23344334445668899999998766533
Q ss_pred eEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC-CCcEEEEEeCCCCeeeEEEEecCCCeE
Q 006979 273 AELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEV 337 (623)
Q Consensus 273 ~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~-DG~l~~~~~~~~g~~~L~~~d~~~~~~ 337 (623)
..|.+.|+.++. ....+.. . ..+....|+| ||++++.... ++. +..+|..+++.
T Consensus 187 ~~v~iwd~~~~~---~~~~~~~-~----~~v~~~~~~~~~~~~l~~~s~-d~~--v~iwd~~~~~~ 241 (393)
T 1erj_A 187 RTVRIWDLRTGQ---CSLTLSI-E----DGVTTVAVSPGDGKYIAAGSL-DRA--VRVWDSETGFL 241 (393)
T ss_dssp SEEEEEETTTTE---EEEEEEC-S----SCEEEEEECSTTCCEEEEEET-TSC--EEEEETTTCCE
T ss_pred CcEEEEECCCCe---eEEEEEc-C----CCcEEEEEECCCCCEEEEEcC-CCc--EEEEECCCCcE
Confidence 247888987762 2222222 2 3456788999 7875555544 454 44557766653
No 360
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.50 E-value=2.9e-05 Score=78.68 Aligned_cols=202 Identities=8% Similarity=0.034 Sum_probs=110.5
Q ss_pred CceEEEeCCEEEEEeCCCCcEEEEeCCCCCCC-ceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~-~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.++.++++ ++++...++.|.++++.++... ...+... ..........|+|+|+.|+....+ ..+.+
T Consensus 17 v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~--~h~~~v~~v~~sp~~~~las~s~D---------~~v~i 84 (330)
T 2hes_X 17 IWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDET--AHKKAIRSVAWRPHTSLLAAGSFD---------STVSI 84 (330)
T ss_dssp EEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTT--CCCSCEEEEEECTTSSEEEEEETT---------SCEEE
T ss_pred eeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecC--CccCCEEEEEECCCCCEEEEEeCC---------CcEEE
Confidence 445667777 5666667888999998764101 1223211 012346678899999988776654 33566
Q ss_pred EEcCCCC-----cccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCC-ceeeeEEEcCCCCCc
Q 006979 226 IALNGQN-----IQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG-DVYKRVCVAGFDPTI 299 (623)
Q Consensus 226 idl~~g~-----~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~-~~~~~~~~~~~~~~~ 299 (623)
.|+..+. ......+....+.+...+|||||++|+-...|. .|.+.|+...+ .......+.+..
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~--------~v~iwd~~~~~~~~~~~~~~~~h~--- 153 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDK--------SVWIWETDESGEEYECISVLQEHS--- 153 (330)
T ss_dssp EEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTS--------CEEEEECCTTCCCCEEEEEECCCS---
T ss_pred EEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCC--------EEEEEeccCCCCCeEEEEEeccCC---
Confidence 6664321 000222333334556688999999988776443 27788885332 111233344444
Q ss_pred cccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEe---ecccccccccccccCcceeEEeecCCC-CEEEEEE
Q 006979 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY---SLDAEFSRPLWVFGINSYEIIQSHGEK-NLIACSY 375 (623)
Q Consensus 300 ~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~---~~~~~~~~~~w~~~~~~~~~l~~s~~~-~~l~~~~ 375 (623)
..+....|+|||++++.... ++.-+||.. .++..+.+. .....+....|.+ ++ ...+++.
T Consensus 154 -~~v~~v~~~p~~~~l~s~s~-D~~i~iW~~--~~~~~~~~~~~~~h~~~v~~~~~~~------------~~~~~~l~s~ 217 (330)
T 2hes_X 154 -QDVKHVIWHPSEALLASSSY-DDTVRIWKD--YDDDWECVAVLNGHEGTVWSSDFDK------------TEGVFRLCSG 217 (330)
T ss_dssp -SCEEEEEECSSSSEEEEEET-TSCEEEEEE--ETTEEEEEEEECCCSSCEEEEEECC------------SSSSCEEEEE
T ss_pred -CceEEEEECCCCCEEEEEcC-CCeEEEEEC--CCCCeeEEEEccCCCCcEEEEEecC------------CCCeeEEEEE
Confidence 46778899999986555554 466666643 344322222 1211222222221 42 3355566
Q ss_pred EECCeEEEEEEe
Q 006979 376 RQNGRSYLGILD 387 (623)
Q Consensus 376 ~~~g~~~L~~~d 387 (623)
..++.-+||.+.
T Consensus 218 s~D~~v~iw~~~ 229 (330)
T 2hes_X 218 SDDSTVRVWKYM 229 (330)
T ss_dssp ETTSCEEEEEEE
T ss_pred eCCCeEEEEEec
Confidence 677877787664
No 361
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.50 E-value=1.1e-07 Score=100.58 Aligned_cols=111 Identities=11% Similarity=-0.051 Sum_probs=74.6
Q ss_pred CCCCEEEEecCCCCCcccCcCCH-HhHHH-HcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCC
Q 006979 493 EKPPLLVKSHGGPTSEARGILNL-SIQYW-TSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGK 570 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~-~~~~~-a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~ 570 (623)
...|+||++||..... ...|.. .+..| ...+|.|+++|++|.+... +..... + -....+|+.+.+++|.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~~-~-~~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTA--YSQASQ-N-VRIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC--HHHHHH-H-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCc--cHHHHH-H-HHHHHHHHHHHHHHHHHhcC
Confidence 3458999999974332 223333 34444 4579999999999855432 211110 0 01123567777888864433
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVS 608 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~ 608 (623)
++.+++.|+|||+||++++.++ .+|++++.++...|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 5678999999999999999999 7899999998776643
No 362
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=98.49 E-value=2.1e-07 Score=93.08 Aligned_cols=149 Identities=13% Similarity=0.096 Sum_probs=87.2
Q ss_pred cEEEEeecCCCCeEEEEEEEcCCCCCCCC---CCCCCCCEEEEecCCCCCcccCc-CCHHhHHHHcCceEEEEECCC--C
Q 006979 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQA---SPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNYG--G 534 (623)
Q Consensus 461 ~~~i~~~~~~dg~~i~~~l~~P~~~~~~~---~~~~~~Pliv~~hGg~~~~~~~~-~~~~~~~~a~~G~~v~~~d~r--G 534 (623)
...+++.+..-+.+....+|.|.+ |.. ++++++|+|.++||......... .....++..+.|.+++.++-. +
T Consensus 14 ~~~~~~~S~~l~~~~~~~VyLPp~--y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~ 91 (299)
T 4fol_A 14 LIKLSHNSNSTKTSMNVNIYLPKH--YYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRG 91 (299)
T ss_dssp EEEEEEECTTTSSEEEEEEEECGG--GGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCS
T ss_pred EEEEEEECcccCCceEEEEEcCCC--CCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcce
Confidence 345666665467788889999976 432 13678999999999843322111 112344556789999998732 1
Q ss_pred CC---------CCch---hHHHhh------ccCCccchHHHHHHHHHHHHh----CCCCCCCceEEEEcChHHHHHHHHh
Q 006979 535 ST---------GYGR---EFRERL------LGRWGIVDVNDCCSCATFLVG----SGKADEKRLCITGGSAGGYTTLAAL 592 (623)
Q Consensus 535 s~---------~~g~---~~~~~~------~~~~g~~~~~D~~~~~~~l~~----~~~~d~~rv~i~G~S~GG~~~~~~~ 592 (623)
.. ..|. .|.+.. ..++-..-.+++...++.-.. +...|+++.+|.|+||||+.++.++
T Consensus 92 ~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~a 171 (299)
T 4fol_A 92 DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGY 171 (299)
T ss_dssp TTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHH
T ss_pred eecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHH
Confidence 10 0010 011110 111111223344444442221 1224567899999999999999988
Q ss_pred -cC--CCceeEEEecccCCCHH
Q 006979 593 -AF--RDTFKAGASLYGVSIPV 611 (623)
Q Consensus 593 -~~--~~~f~a~v~~~g~~d~~ 611 (623)
++ |+.|+++.+.+|+++..
T Consensus 172 l~~~~~~~~~~~~s~s~~~~p~ 193 (299)
T 4fol_A 172 LKGYSGKRYKSCSAFAPIVNPS 193 (299)
T ss_dssp HHTGGGTCCSEEEEESCCCCGG
T ss_pred HhCCCCCceEEEEecccccCcc
Confidence 64 78999999999998753
No 363
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.49 E-value=3.1e-05 Score=81.24 Aligned_cols=205 Identities=12% Similarity=0.063 Sum_probs=116.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC--EEEEEeCCCC-c
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD--TVIFSNYKDQ-R 166 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d--~l~f~~~~~~-~ 166 (623)
.+..+.+++++.|||.+.. ++ .|++++..++ ....+.... .. .. .+++++ .+++.+...+ .
T Consensus 132 ~P~~la~d~~g~lyv~d~~---~~--~I~~id~~~g-~~~~~~~~~--------~~-~~-ia~~~~g~~l~~~d~~~~~~ 195 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRD---DP--RVRLISVDDN-KVTTVHPGF--------KG-GK-PAVTKDKQRVYSIGWEGTHT 195 (409)
T ss_dssp CEEEEEECSTTEEEEEETT---TT--EEEEEETTTT-EEEEEEETC--------CB-CB-CEECTTSSEEEEEBSSTTCE
T ss_pred CceEEEEeCCCCEEEEecC---CC--cEEEEECCCC-EEEEeeccC--------CC-Cc-eeEecCCCcEEEEecCCCce
Confidence 4567888886679998843 23 3666665522 222222111 01 12 445444 5666655443 7
Q ss_pred EEEEeCCCCCCCceec----CCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceec---
Q 006979 167 LYKHSIDSKDSSPLPI----TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL--- 239 (623)
Q Consensus 167 l~~~d~~~g~~~~~~L----t~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l--- 239 (623)
||+++..++ ...+.+ ... ..+..+.+++|++..|++ .... ..|+++|++++. ...+
T Consensus 196 I~~~d~~~~-~~~~~~g~~~~~~----~~~p~~iav~p~~g~lyv-~d~~--------~~I~~~d~~~~~---~~~~~~~ 258 (409)
T 3hrp_A 196 VYVYMKASG-WAPTRIGQLGSTF----SGKIGAVALDETEEWLYF-VDSN--------KNFGRFNVKTQE---VTLIKQL 258 (409)
T ss_dssp EEEEEGGGT-TCEEEEEECCTTS----CSCCCBCEECTTSSEEEE-ECTT--------CEEEEEETTTCC---EEEEEEC
T ss_pred EEEEEcCCC-ceeEEeeeccchh----cCCcEEEEEeCCCCeEEE-EECC--------CcEEEEECCCCC---EEEEecc
Confidence 999998765 223344 211 234467889996666666 3321 579999998876 4433
Q ss_pred -ccCCC-cc--cceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCC--CCc---------cccCc
Q 006979 240 -VSGSD-FY--AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD--PTI---------VESPT 304 (623)
Q Consensus 240 -~~~~~-~~--~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~--~~~---------~~~~~ 304 (623)
..+.. .. ...+|+|++.+|++.... ...|++++.++. .. .+.+.. ..+ ...+.
T Consensus 259 ~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-------~~~I~~~~~~g~----~~-~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 259 ELSGSLGTNPGPYLIYYFVDSNFYMSDQN-------LSSVYKITPDGE----CE-WFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp CCCSCCCCSSCCEEEEETTTTEEEEEETT-------TTEEEEECTTCC----EE-EEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred cccCCCCCCccccEEEeCCCCEEEEEeCC-------CCEEEEEecCCC----EE-EEEeCCCCCCcCCCcccccEeCCCe
Confidence 22221 22 267899987888877522 346888887643 12 222211 000 02345
Q ss_pred CceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEe
Q 006979 305 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (623)
Q Consensus 305 ~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~ 341 (623)
.+++++||++| +++. .+..+|.++++.+++...+.
T Consensus 327 gia~d~dG~ly-vad~-~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 327 GMTVDEDGNFY-IVDG-FKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EEEECTTCCEE-EEET-TTTCEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEE-EEeC-CCCCEEEEEECCCCEEEEEe
Confidence 67899999854 5553 14567999997677766554
No 364
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.48 E-value=0.00012 Score=80.80 Aligned_cols=302 Identities=12% Similarity=0.109 Sum_probs=160.2
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcE
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l 167 (623)
..+.++.+++ +++|||.+... ..|++.+.+ |..+..+... ...+ ...+++..+.+|+++...+.|
T Consensus 171 ~~P~Glald~~~~~LY~aD~~~-----~~I~~~~~d--G~~~~~~~~~----~~~~---P~gi~~~~~~ly~td~~~~~V 236 (619)
T 3s94_A 171 YWPNGLTLDYEEQKLYWADAKL-----NFIHKSNLD--GTNRQAVVKG----SLPH---PFALTLFEDILYWTDWSTHSI 236 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTT-----CCEEEESSS--CCEEC----------------CCCEEESSSEEEEECTTTCSE
T ss_pred CCCcEEEEEccCCEEEEEeCCC-----CeEEEecCC--CCccEEEEeC----CCCC---ceEEEEeCCEEEEecCCCCEE
Confidence 3467889998 89999998542 247777776 3333333211 0001 123455677899998888889
Q ss_pred EEEeCCCCCCCceecCCCCCCC-Ceeec--------------------cee-eCCCCCEEEEEEeccC----C--C----
Q 006979 168 YKHSIDSKDSSPLPITPDYGEP-LVSYA--------------------DGI-FDPRFNRYVTVREDRR----Q--D---- 215 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~-~~~~~--------------------d~~-~sPdG~~l~~v~~~~~----~--~---- 215 (623)
+++|..+| ...+.+......+ ...+. ..+ .+|.+....+.+...- + .
T Consensus 237 ~~~d~~tg-~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 315 (619)
T 3s94_A 237 LACNKYTG-EGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 315 (619)
T ss_dssp EEEESSSC-CCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSS
T ss_pred EEEECCCC-cccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCC
Confidence 99998776 2333333221000 00000 001 1121111111111100 0 0
Q ss_pred CC-----CceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeE
Q 006979 216 AL-----NSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV 290 (623)
Q Consensus 216 ~~-----~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~ 290 (623)
+. .....|..++++++..........+-.......+.+.+.+|+|.... ...|+.+++++.. ...
T Consensus 316 ~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~-------~~~I~r~~~~g~~---~~~ 385 (619)
T 3s94_A 316 ATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDE-------VRAIRRSFIDGSG---SQF 385 (619)
T ss_dssp CSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCS---CEE
T ss_pred CceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCC-------CCeEEEEEcCCCc---cEE
Confidence 00 01145667777665311111111222233445688888889998632 3469999988753 233
Q ss_pred EEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCC
Q 006979 291 CVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKN 369 (623)
Q Consensus 291 ~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~ 369 (623)
++...- ..+...+....++ ||| ++. +...|.++++++...+.|..+ .+..| +.+++.+ ..+
T Consensus 386 v~~~~~----~~p~GlAvD~~~~~lY~-tD~--~~~~I~v~~~~G~~~~~l~~~--~l~~P------~~iavdp---~~G 447 (619)
T 3s94_A 386 VVTAQI----AHPDGIAVDWVARNLYW-TDT--GTDRIEVTRLNGTMRKILISE--DLEEP------RAIVLDP---MVG 447 (619)
T ss_dssp EECSSC----SCCCEEEEETTTTEEEE-EET--TTTEEEEEETTSCSCEEEECT--TCCSE------EEEEEET---TTT
T ss_pred EEECCC----CCcCceEEecccCcEEE-EeC--CCCcEEEEeCCCCeEEEEEEC--CCCCe------eeEEEEc---CCC
Confidence 333221 3445667765555 655 454 456788888877655555432 22222 3344432 567
Q ss_pred EEEEEEEECCeEEEEEEeCCCCceeecccC-CcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcce
Q 006979 370 LIACSYRQNGRSYLGILDDFGHSLSLLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 437 (623)
Q Consensus 370 ~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~-~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~~ 437 (623)
.+||+... ...+|++.++++...+.+... ...-.++ +.+++++|+.-+. ...|+++++++...+
T Consensus 448 ~ly~tD~g-~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~---~~~I~~~~~dG~~~~ 514 (619)
T 3s94_A 448 YMYWTDWG-EIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAK---TDKIEVMNTDGTGRR 514 (619)
T ss_dssp EEEEEECS-SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT---TTEEEEEESSSCCCE
T ss_pred cEEEecCC-CCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECC---CCEEEEEecCCCceE
Confidence 88887632 247899999998766655432 2223344 6668888887432 357999999876543
No 365
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.47 E-value=1.7e-05 Score=87.90 Aligned_cols=235 Identities=6% Similarity=-0.030 Sum_probs=129.5
Q ss_pred EEEeCC--EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 150 FRIFGD--TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 150 ~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
.++++| .+++.. ++.++++++.++ ...+.++.. .......+|||||++|+-...+ ..+.+.|
T Consensus 24 ~~~spdg~~l~~~~--~~~v~l~~~~~~-~~~~~~~~h----~~~v~~~~~spdg~~lasg~~d---------~~v~lWd 87 (611)
T 1nr0_A 24 LGNTPAGDKIQYCN--GTSVYTVPVGSL-TDTEIYTEH----SHQTTVAKTSPSGYYCASGDVH---------GNVRIWD 87 (611)
T ss_dssp CEECTTSSEEEEEE--TTEEEEEETTCS-SCCEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEE
T ss_pred EeeCCCCCEEEeCC--CCEEEEecCCCc-ccCeEecCC----CCceEEEEECCCCcEEEEEeCC---------CCEEEeE
Confidence 344444 566654 346899998765 344555543 3346678899999988776554 4578888
Q ss_pred cCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce
Q 006979 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (623)
+.+++......+......+...+|||||++|+....+.. ....|++.| .+. ....+.+.. ..+....
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~----~~~~v~~wd--~~~---~~~~l~gh~----~~v~~v~ 154 (611)
T 1nr0_A 88 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE----RFGHVFLFD--TGT---SNGNLTGQA----RAMNSVD 154 (611)
T ss_dssp SSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS----CSEEEEETT--TCC---BCBCCCCCS----SCEEEEE
T ss_pred CCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC----ceeEEEEee--CCC---CcceecCCC----CCceEEE
Confidence 865431101223333344566889999999987764322 123466555 332 122234444 4677889
Q ss_pred eCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEE
Q 006979 308 WSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (623)
Q Consensus 308 ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~ 385 (623)
|+||+. +++.... ++.-+|| |..+++...... ....+.. ..|. |+++ ++++...++.-+||
T Consensus 155 f~p~~~~~l~s~s~-D~~v~lw--d~~~~~~~~~l~~H~~~V~~---------v~fs---pdg~-~las~s~D~~i~lw- 217 (611)
T 1nr0_A 155 FKPSRPFRIISGSD-DNTVAIF--EGPPFKFKSTFGEHTKFVHS---------VRYN---PDGS-LFASTGGDGTIVLY- 217 (611)
T ss_dssp ECSSSSCEEEEEET-TSCEEEE--ETTTBEEEEEECCCSSCEEE---------EEEC---TTSS-EEEEEETTSCEEEE-
T ss_pred ECCCCCeEEEEEeC-CCeEEEE--ECCCCeEeeeeccccCceEE---------EEEC---CCCC-EEEEEECCCcEEEE-
Confidence 999997 4554444 4554554 555554333222 2222222 2333 2665 44555566765554
Q ss_pred EeCCCCce-eecc-------cCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 386 LDDFGHSL-SLLD-------IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 386 ~d~~~~~~-~~lt-------~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
|..+++. ..+. .....+..+ ++++..++ +++.. ..+.+.++.+++
T Consensus 218 -d~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D---~~v~lWd~~~~~ 272 (611)
T 1nr0_A 218 -NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASAD---KTIKIWNVATLK 272 (611)
T ss_dssp -ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETT---SEEEEEETTTTE
T ss_pred -ECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeCC---CeEEEEeCCCCc
Confidence 6555544 3332 122345555 56666554 43322 356667777654
No 366
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.47 E-value=4.3e-05 Score=84.45 Aligned_cols=206 Identities=10% Similarity=0.117 Sum_probs=122.3
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCc
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~ 166 (623)
...+.++.+++ ++.|||.+... + .|++....+......++..+.. .-.+-++.+..+.+|+.+...++
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~---~--~I~r~~~~g~~~~~~v~~~~~~------~P~GlAvD~~~~~ly~~d~~~~~ 107 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSE---E--AIKRTEFNKTESVQNVVVSGLL------SPDGLACDWLGEKLYWTDSETNR 107 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTT---T--EEEEEEC-----CEEEECSSCS------CEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEEEeCCCEEEEEECCC---C--eEEEEEccCCCceEEEEeCCCC------CcCeEEEEecCCEEEEEeCCCCE
Confidence 34456788888 99999998652 3 3666665521111223332210 11122333335689999888889
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc-CCCc
Q 006979 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GSDF 245 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~-~~~~ 245 (623)
|.++++++. ..+.|... ....-.+.+++|.+.+|+++.... ...|++.++++.. .+.+.. ....
T Consensus 108 I~v~~~dG~--~~~~l~~~---~l~~P~~Iavdp~~g~ly~tD~g~-------~~~I~r~~~dG~~---~~~l~~~~~~~ 172 (619)
T 3s94_A 108 IEVSNLDGS--LRKVLFWQ---ELDQPRAIALDPSSGFMYWTDWGE-------VPKIERAGMDGSS---RFIIINSEIYW 172 (619)
T ss_dssp EEEEETTSC--SCEEEECS---SCSCCCCEEEETTTTEEEEEECSS-------SCEEEEEETTSCS---CEEEECSSCSS
T ss_pred EEEEECCCC--CEEEEEeC---CCCCCceEEEecCCCeEEEeccCC-------CCEEEEEECCCCc---eEEEEeCCCCC
Confidence 999999865 44455422 022345788999888888875421 1579999999876 455543 3334
Q ss_pred ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCee
Q 006979 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFW 325 (623)
Q Consensus 246 ~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~ 325 (623)
..+.+++|++++|||.... ...|+++++++.. .+.+..+.. ..+.......| .+|.++. +..
T Consensus 173 P~Glald~~~~~LY~aD~~-------~~~I~~~~~dG~~---~~~~~~~~~----~~P~gi~~~~~--~ly~td~--~~~ 234 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAK-------LNFIHKSNLDGTN---RQAVVKGSL----PHPFALTLFED--ILYWTDW--STH 234 (619)
T ss_dssp EEEEEEETTTTEEEEEETT-------TCCEEEESSSCCE---EC-------------CCCEEESSS--EEEEECT--TTC
T ss_pred CcEEEEEccCCEEEEEeCC-------CCeEEEecCCCCc---cEEEEeCCC----CCceEEEEeCC--EEEEecC--CCC
Confidence 5567899999999998633 3359999998752 222332222 33456666544 4455665 455
Q ss_pred eEEEEecCCCeE
Q 006979 326 NLHKWIESNNEV 337 (623)
Q Consensus 326 ~L~~~d~~~~~~ 337 (623)
.|+++|..+++.
T Consensus 235 ~V~~~d~~tg~~ 246 (619)
T 3s94_A 235 SILACNKYTGEG 246 (619)
T ss_dssp SEEEEESSSCCC
T ss_pred EEEEEECCCCcc
Confidence 788888877653
No 367
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.46 E-value=1.9e-06 Score=103.81 Aligned_cols=266 Identities=10% Similarity=0.023 Sum_probs=143.8
Q ss_pred cCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcEE
Q 006979 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRLY 168 (623)
Q Consensus 91 ~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l~ 168 (623)
+..+.++| +..+..-. ++|...+|..... +....+.. |...+.+..++++ ..+++...++.|.
T Consensus 964 i~~~~~sp~g~~l~~g~----~~g~i~i~d~~~~---~~~~~~~~--------h~~~v~~l~~s~dg~~l~s~~~dg~i~ 1028 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGD----EDGAIKIIELPNN---RVFSSGVG--------HKKAVRHIQFTADGKTLISSSEDSVIQ 1028 (1249)
T ss_dssp EEEEEECTTSSEEEEEE----TTSCCEEEETTTT---SCEEECCC--------CSSCCCCEEECSSSSCEEEECSSSBEE
T ss_pred EEEEEEcCCCCEEEEEc----CCCCEEEEEcCCC---ceeeeccc--------CCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 45567777 44333322 2466666655432 22222211 2223455666665 4556666788899
Q ss_pred EEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccc
Q 006979 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAF 248 (623)
Q Consensus 169 ~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~ 248 (623)
++++.++ ....+... ........|+|+++.+ ....+ +.+.++|+.+++. .+.+......+..
T Consensus 1029 vwd~~~~--~~~~~~~~----~~~v~~~~~~~~~~l~-~~~~d---------g~v~vwd~~~~~~--~~~~~~~~~~v~~ 1090 (1249)
T 3sfz_A 1029 VWNWQTG--DYVFLQAH----QETVKDFRLLQDSRLL-SWSFD---------GTVKVWNVITGRI--ERDFTCHQGTVLS 1090 (1249)
T ss_dssp EEETTTT--EEECCBCC----SSCEEEEEECSSSEEE-EEESS---------SEEEEEETTTTCC--CEEEECCSSCCCC
T ss_pred EEECCCC--ceEEEecC----CCcEEEEEEcCCCcEE-EEECC---------CcEEEEECCCCce--eEEEcccCCcEEE
Confidence 9999876 44433332 3456678899988544 33332 5689999988762 3445444455667
Q ss_pred eeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEE
Q 006979 249 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 328 (623)
Q Consensus 249 p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~ 328 (623)
..|||||++|+....+. .|.++|+..+.. ...+.+.. ..+..+.|+|||++++.... +|.-.
T Consensus 1091 ~~~s~d~~~l~s~s~d~--------~v~iwd~~~~~~---~~~l~~h~----~~v~~~~~s~dg~~lat~~~-dg~i~-- 1152 (1249)
T 3sfz_A 1091 CAISSDATKFSSTSADK--------TAKIWSFDLLSP---LHELKGHN----GCVRCSAFSLDGILLATGDD-NGEIR-- 1152 (1249)
T ss_dssp EEECSSSSSCEEECCSS--------CCCEECSSSSSC---SBCCCCCS----SCEEEEEECSSSSEEEEEET-TSCCC--
T ss_pred EEECCCCCEEEEEcCCC--------cEEEEECCCcce---eeeeccCC----CcEEEEEECCCCCEEEEEeC-CCEEE--
Confidence 89999999988765432 277778876632 22333333 45678899999995555554 45544
Q ss_pred EEecCCCeEEEEe-ecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccCCcceEee
Q 006979 329 KWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI 406 (623)
Q Consensus 329 ~~d~~~~~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~~~~v~~~ 406 (623)
.+|..+++..... +................+.|. |+++.++.. +| .|.++|+.+++.. .+......+..+
T Consensus 1153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs---~dg~~l~s~---~g--~v~vwd~~~g~~~~~~~~~~~~i~~~ 1224 (1249)
T 3sfz_A 1153 IWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFS---PDSKTLVSA---GG--YLKWWNVATGDSSQTFYTNGTNLKKI 1224 (1249)
T ss_dssp EEESSSSCCCCCCCCCC-------CCSCCCEEEEC---TTSSCEEEE---SS--SEEEBCSSSCBCCCCCCCSSCCCCCC
T ss_pred EEECCCCceEEEeccccccccccccCceEEEEEEC---CCCCEEEEC---CC--eEEEEECCCCceeeeeeccCCcccEE
Confidence 4566565432111 100000000000011233343 377766543 24 4666777766543 333233334333
Q ss_pred --eecCCEEEE
Q 006979 407 --TLGNDCLFV 415 (623)
Q Consensus 407 --~~~~~~~~~ 415 (623)
++++..++.
T Consensus 1225 ~~s~dg~~l~~ 1235 (1249)
T 3sfz_A 1225 HVSPDFRTYVT 1235 (1249)
T ss_dssp EECSSSCCEEE
T ss_pred EECCCCCEEEE
Confidence 666665544
No 368
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.46 E-value=2.3e-07 Score=97.71 Aligned_cols=111 Identities=10% Similarity=-0.068 Sum_probs=72.7
Q ss_pred CCEEEEecCCCCCcccC-cCCHHhHHHHc-CceEEEEECCCCCCCCchhHHHhh---ccCCc----cchHHHHHHHHHHH
Q 006979 495 PPLLVKSHGGPTSEARG-ILNLSIQYWTS-RGWAFVDVNYGGSTGYGREFRERL---LGRWG----IVDVNDCCSCATFL 565 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~-~~~~~~~~~a~-~G~~v~~~d~rGs~~~g~~~~~~~---~~~~g----~~~~~D~~~~~~~l 565 (623)
.| ||++|||++..... ........+++ .|+.|+.+|+||.|.+.. +.... ..+++ ...++|+...++++
T Consensus 39 ~P-i~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p-~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l 116 (446)
T 3n2z_B 39 GS-ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLP-FGDNSFKDSRHLNFLTSEQALADFAELIKHL 116 (446)
T ss_dssp CE-EEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCT-TGGGGGSCTTTSTTCSHHHHHHHHHHHHHHH
T ss_pred CC-EEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCC-CCccccccchhhccCCHHHHHHHHHHHHHHH
Confidence 46 45568887543321 11123334444 589999999999665421 11111 12222 23468888888888
Q ss_pred HhC-CCCCCCceEEEEcChHHHHHHHHh-cCCCceeEEEecccC
Q 006979 566 VGS-GKADEKRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGV 607 (623)
Q Consensus 566 ~~~-~~~d~~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~ 607 (623)
..+ ......++.++||||||.++++++ .+|+++.++|+.+++
T Consensus 117 ~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssap 160 (446)
T 3n2z_B 117 KRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160 (446)
T ss_dssp HHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccc
Confidence 764 223346899999999999999999 899999999986643
No 369
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.45 E-value=1.2e-07 Score=99.81 Aligned_cols=113 Identities=16% Similarity=0.078 Sum_probs=77.8
Q ss_pred CCCCEEEEecCCCCCcccCcCCHHhHHHHcCce---EEEEECCCCCCCC----------ch--hHHH-------------
Q 006979 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGW---AFVDVNYGGSTGY----------GR--EFRE------------- 544 (623)
Q Consensus 493 ~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~---~v~~~d~rGs~~~----------g~--~~~~------------- 544 (623)
+..|.||++||... ....|...+..|+++|| .|+.+|++|.|.. |. ....
T Consensus 20 ~~~ppVVLlHG~g~--s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~ 97 (484)
T 2zyr_A 20 EDFRPVVFVHGLAG--SAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDK 97 (484)
T ss_dssp -CCCCEEEECCTTC--CGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHH
T ss_pred CCCCEEEEECCCCC--CHHHHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccc
Confidence 34567889999843 44567788999999999 6999999984421 00 0000
Q ss_pred hhcc---CCccchHHHHHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCC---CceeEEEecccCCC
Q 006979 545 RLLG---RWGIVDVNDCCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFR---DTFKAGASLYGVSI 609 (623)
Q Consensus 545 ~~~~---~~g~~~~~D~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~---~~f~a~v~~~g~~d 609 (623)
.... .......+++.+.++.+.++- +.+++.++||||||.+++.++ .+| +.++++|.+.|..+
T Consensus 98 v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 98 ILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0000 001123567777777777652 237999999999999999988 676 48999999998875
No 370
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.45 E-value=3.4e-05 Score=86.85 Aligned_cols=156 Identities=15% Similarity=0.143 Sum_probs=98.1
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ .++++...++.|.++|+.++ ...+.+... ........|+|+|++|+....| ..|.+
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~-~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s~D---------~~i~i 498 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAG-VSTRRFVGH----TKDVLSVAFSLDNRQIVSASRD---------RTIKL 498 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SCEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCC-cceeEEeCC----CCCEEEEEEeCCCCEEEEEeCC---------CEEEE
Confidence 455666666 56677778889999999876 223344332 3346678899999988776654 34777
Q ss_pred EEcCCCCcccceeccc----CCCcccceeeCCCCC--EEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCc
Q 006979 226 IALNGQNIQEPKVLVS----GSDFYAFPRMDPRGE--RMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (623)
Q Consensus 226 idl~~g~~~~~~~l~~----~~~~~~~p~wSPDG~--~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~ 299 (623)
.|+.+.. ...+.. ..+.+...+|||++. .|+-...|. .|.+.|+.... ....+.+..
T Consensus 499 wd~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~--------~v~vwd~~~~~---~~~~~~~h~--- 561 (694)
T 3dm0_A 499 WNTLGEC---KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK--------TVKVWNLSNCK---LRSTLAGHT--- 561 (694)
T ss_dssp ECTTSCE---EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS--------CEEEEETTTCC---EEEEECCCS---
T ss_pred EECCCCc---ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC--------eEEEEECCCCc---EEEEEcCCC---
Confidence 7776543 222321 123455678999984 454444332 38888987662 344455544
Q ss_pred cccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeE
Q 006979 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV 337 (623)
Q Consensus 300 ~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~ 337 (623)
..+....|+|||++++.... ++. |..+|..+++.
T Consensus 562 -~~v~~v~~spdg~~l~sg~~-Dg~--i~iwd~~~~~~ 595 (694)
T 3dm0_A 562 -GYVSTVAVSPDGSLCASGGK-DGV--VLLWDLAEGKK 595 (694)
T ss_dssp -SCEEEEEECTTSSEEEEEET-TSB--CEEEETTTTEE
T ss_pred -CCEEEEEEeCCCCEEEEEeC-CCe--EEEEECCCCce
Confidence 56778899999996555544 454 44556666653
No 371
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=98.44 E-value=6.1e-07 Score=83.26 Aligned_cols=96 Identities=7% Similarity=-0.065 Sum_probs=64.8
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADE 573 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 573 (623)
+.|.||++||.+.... ..|..........+| .++++|. +....++..+.+..+.++ .+
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~~---~v~~~~~---------------~~~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHWQ---RIRQREW---------------YQADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTSE---ECCCSCC---------------SSCCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCeE---EEeccCC---------------CCcCHHHHHHHHHHHHHh--cC-
Confidence 3578999999964332 223233333233444 4566652 123455666666665554 23
Q ss_pred CceEEEEcChHHHHHHHHh-cCCCceeEEEecccCCCHH
Q 006979 574 KRLCITGGSAGGYTTLAAL-AFRDTFKAGASLYGVSIPV 611 (623)
Q Consensus 574 ~rv~i~G~S~GG~~~~~~~-~~~~~f~a~v~~~g~~d~~ 611 (623)
+++.++|||+||.+++.++ .+|++++++|..+|..+..
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 112 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMR 112 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGG
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccc
Confidence 7999999999999999999 7899999999999987654
No 372
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.43 E-value=5.7e-05 Score=83.60 Aligned_cols=231 Identities=15% Similarity=0.128 Sum_probs=141.8
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
.|+|+ ..+.|.++++++. ....+.+..+ -.......|+++++.|+++.... ..|++++++++.
T Consensus 8 ~Ll~s--~~~~I~~i~l~~~--~~~~~~~~~~--~~~~~~l~~d~~~~~lywtD~~~--------~~I~r~~~~g~~--- 70 (628)
T 4a0p_A 8 FLLFS--RRADIRRISLETN--NNNVAIPLTG--VKEASALDFDVTDNRIYWTDISL--------KTISRAFMNGSA--- 70 (628)
T ss_dssp EEEEE--ETTEEEEEESSCT--TCEEECCCCS--CSCEEEEEEETTTTEEEEEETTT--------TEEEEEETTSCS---
T ss_pred EEEEE--eCCcEEEEECCCC--CcceEEEcCC--CCceEEEEEECCCCEEEEEECCC--------CeEEEEECCCCC---
Confidence 46776 3456999999865 3333222100 12234577999888888765432 679999998876
Q ss_pred ceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcE
Q 006979 236 PKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 314 (623)
Q Consensus 236 ~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l 314 (623)
.+.+. .+.....+.+..+.++.|||.... ...|.++++++.. ...++...- ..+...+..|....
T Consensus 71 ~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~-------~~~I~v~~~dG~~---~~~l~~~~l----~~P~~iavdp~~G~ 136 (628)
T 4a0p_A 71 LEHVVEFGLDYPEGMAVDWLGKNLYWADTG-------TNRIEVSKLDGQH---RQVLVWKDL----DSPRALALDPAEGF 136 (628)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSTT---CEEEECSSC----CCEEEEEEETTTTE
T ss_pred cEEEEeCCCCCcceEEEEeCCCEEEEEECC-------CCEEEEEecCCCc---EEEEEeCCC----CCcccEEEccCCCe
Confidence 44443 333344566788888999998532 4569999998762 223332222 34556778875444
Q ss_pred EEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee
Q 006979 315 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (623)
Q Consensus 315 ~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~ 394 (623)
+|.++. ....+|+++++++...+.+... +..| ..+.+- ++++.|||+.. +...|+++|++++..+
T Consensus 137 lY~tD~-g~~~~I~r~~~dG~~~~~l~~~---~~~P------~GlalD---~~~~~LY~aD~--~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 137 MYWTEW-GGKPKIDRAAMDGSERTTLVPN---VGRA------NGLTID---YAKRRLYWTDL--DTNLIESSNMLGLNRE 201 (628)
T ss_dssp EEEEEC-SSSCEEEEEETTSCSCEEEECS---CSSE------EEEEEE---TTTTEEEEEET--TTTEEEEEETTSCSCE
T ss_pred EEEeCC-CCCCEEEEEeCCCCceEEEECC---CCCc------ceEEEc---cccCEEEEEEC--CCCEEEEEcCCCCceE
Confidence 445665 2356899999988776666531 1111 233333 26788998864 4557999999887665
Q ss_pred ecccCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 395 LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 395 ~lt~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.+......-.++..+++.+|++-. ....|++++..+++
T Consensus 202 v~~~~l~~P~glav~~~~ly~tD~---~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 202 VIADDLPHPFGLTQYQDYIYWTDW---SRRSIERANKTSGQ 239 (628)
T ss_dssp EEEECCSCEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EeeccCCCceEEEEECCEEEEecC---CCCEEEEEECCCCC
Confidence 444332222345556678877642 23578999876664
No 373
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.41 E-value=5.5e-05 Score=85.65 Aligned_cols=233 Identities=10% Similarity=0.013 Sum_probs=139.2
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc-c
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-Q 234 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~-~ 234 (623)
.++|+. ...|.++++++. ....|... ......+.+++.++.|+++.... ..|+++++++... .
T Consensus 397 ~Ll~an--~~~Ir~i~l~~~--~~~~l~~~----~~~~~gl~~d~~~~~lY~sD~~~--------~~I~~~~l~g~~~~~ 460 (791)
T 3m0c_C 397 YLFFTN--RHEVRKMTLDRS--EYTSLIPN----LRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVS 460 (791)
T ss_dssp EEEEEC--BSSEEEECTTSC--CCEEEECS----CSSEEEEEEETTTTEEEEEETTT--------TEEEEEEC-------
T ss_pred cccccc--ccceeEeeccCC--cceeeecC----CCceEEEeecccCCeeEEeeccc--------eeEEEEeccCCCCCc
Confidence 466663 345999999865 45555443 22344577888888887765432 5799999986310 0
Q ss_pred cceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc
Q 006979 235 EPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (623)
Q Consensus 235 ~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~ 313 (623)
..+.+. .+.....+.++.+.++.|||.... ...|+++++++.. ...++.... ..+..++..|.+.
T Consensus 461 ~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG~~---~~~l~~~~l----~~P~gIaVDp~~g 526 (791)
T 3m0c_C 461 SYDTVISRDIQAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVK---RKTLFRENG----SKPRAIVVDPVHG 526 (791)
T ss_dssp -CEEEECSSCSCCCEEEEETTTTEEEEEETT-------TTEEEEEETTSSS---EEEEEECTT----CCEEEEEEETTTT
T ss_pred ceeEEEecCCCCcceeeeeecCCcEEEEecC-------CCeEEEEeCCCCe---EEEEEeCCC----CCcceEEEecCCC
Confidence 023333 244445567788899999998633 3469999998662 233333222 3455777888755
Q ss_pred EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
.+|.++. .....|+++++++...+.+.... +..| ..+.+- +.++.|||+. .+..+|+++++++...
T Consensus 527 ~LYwtD~-g~~~~I~~~~~dG~~~~~lv~~~--l~~P------~GLavD---~~~~~LYwaD--~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 527 FMYWTDW-GTPAKIKKGGLNGVDIYSLVTEN--IQWP------NGITLD---LLSGRLYWVD--SKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEEEC-SSSCEEEEEETTSCCEEEEECSS--CSCE------EEEEEE---TTTTEEEEEE--TTTTEEEEEETTSCSC
T ss_pred CEEEecC-CCCCeEEEEecCCCceEEEEeCC--CCCc------eEEEEe---cCCCeEEEEe--CCCCcEEEEecCCCce
Confidence 4445665 22367999999877666665431 1111 223332 2578899885 4556899999998777
Q ss_pred eecccCC---cceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 394 SLLDIPF---TDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 394 ~~lt~~~---~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
+.+.... ..-..+...+++||++-. ....|++++..+|+
T Consensus 593 ~~v~~~~~~l~~P~glav~~~~lYwtD~---~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 593 KTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 634 (791)
T ss_dssp EEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEecCCCccCCCCEEEEeCCEEEEEEC---CCCEEEEEeCCCCc
Confidence 6654321 112244556777777643 23578888866664
No 374
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.40 E-value=6.7e-05 Score=76.06 Aligned_cols=234 Identities=8% Similarity=-0.064 Sum_probs=125.1
Q ss_pred EEEEEeCC-----CCcEEEEeCCCCCCCcee-cCC--CCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 156 TVIFSNYK-----DQRLYKHSIDSKDSSPLP-ITP--DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 156 ~l~f~~~~-----~~~l~~~d~~~g~~~~~~-Lt~--~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
.+++.++. ++.|.++|.+++ +... +.. ....-.....+..+ ++++++.+.... +.|.++|
T Consensus 3 g~~v~neg~~g~~~~~l~~~d~~t~--~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~~--------~~v~viD 70 (328)
T 3dsm_A 3 GLFITNEGNFQYSNATLSYYDPATC--EVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNNS--------HVIFAID 70 (328)
T ss_dssp EEEEEECCCTTSCCBEEEEEETTTT--EEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGGG--------TEEEEEE
T ss_pred eEEEEecCCCCCCCceEEEEECCCC--EEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcCC--------CEEEEEE
Confidence 34555554 567999999876 3221 100 00000111223334 456666655432 6799999
Q ss_pred cCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCce
Q 006979 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (623)
Q Consensus 228 l~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (623)
+.+++. +..+.. ........+|||| +|++.... ...|+++|..++.. ...+..+........+..+.
T Consensus 71 ~~t~~~--~~~i~~-~~~p~~i~~~~~g-~lyv~~~~-------~~~v~~iD~~t~~~--~~~i~~g~~~~~~~~p~~i~ 137 (328)
T 3dsm_A 71 INTFKE--VGRITG-FTSPRYIHFLSDE-KAYVTQIW-------DYRIFIINPKTYEI--TGYIECPDMDMESGSTEQMV 137 (328)
T ss_dssp TTTCCE--EEEEEC-CSSEEEEEEEETT-EEEEEEBS-------CSEEEEEETTTTEE--EEEEECTTCCTTTCBCCCEE
T ss_pred CcccEE--EEEcCC-CCCCcEEEEeCCC-eEEEEECC-------CCeEEEEECCCCeE--EEEEEcCCccccCCCcceEE
Confidence 998872 244532 2333445789998 66555411 34599999887621 12222222100001344566
Q ss_pred eCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC--------
Q 006979 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG-------- 379 (623)
Q Consensus 308 ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g-------- 379 (623)
+ .+ +.+|+++. .....|.++|+.+++.....+... .| ..+.+. .++.+|+....+.
T Consensus 138 ~-~~-~~lyv~~~-~~~~~v~viD~~t~~~~~~i~~g~---~p------~~i~~~----~dG~l~v~~~~~~~~~~~~~~ 201 (328)
T 3dsm_A 138 Q-YG-KYVYVNCW-SYQNRILKIDTETDKVVDELTIGI---QP------TSLVMD----KYNKMWTITDGGYEGSPYGYE 201 (328)
T ss_dssp E-ET-TEEEEEEC-TTCCEEEEEETTTTEEEEEEECSS---CB------CCCEEC----TTSEEEEEBCCBCTTCSSCBC
T ss_pred E-EC-CEEEEEcC-CCCCEEEEEECCCCeEEEEEEcCC---Cc------cceEEc----CCCCEEEEECCCccCCccccC
Confidence 6 34 44445554 114479999999887544332211 11 223332 2345666654320
Q ss_pred eEEEEEEeCCCCcee-ecccCCc-ceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 380 RSYLGILDDFGHSLS-LLDIPFT-DIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 380 ~~~L~~~d~~~~~~~-~lt~~~~-~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
...|+++|.+++++. .+..+.. ....+ +++++++|+... .++++|+++++.
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPVEADRV 256 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEETTCSSC
T ss_pred CceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEECCCCce
Confidence 268999999888765 4443321 22333 667887777532 799999988764
No 375
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.40 E-value=3.8e-05 Score=78.12 Aligned_cols=104 Identities=12% Similarity=0.031 Sum_probs=70.4
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~ 234 (623)
.++++...++.|.++|+.++ .....+... ........|+| +++.|+....+ ..|.++|+.+++.
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~~- 150 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITM-QCIKHYVGH----GNAINELKFHPRDPNLLLSVSKD---------HALRLWNIQTDTL- 150 (366)
T ss_dssp EEEEEEETTCEEEEECTTTC-CEEEEEESC----CSCEEEEEECSSCTTEEEEEETT---------SCEEEEETTTTEE-
T ss_pred CEEEEecCCCEEEEEEchhc-eEeeeecCC----CCcEEEEEECCCCCCEEEEEeCC---------CeEEEEEeecCeE-
Confidence 56667777888999999876 233444422 34567788999 88887766543 4588899988762
Q ss_pred cceec---ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC
Q 006979 235 EPKVL---VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN 283 (623)
Q Consensus 235 ~~~~l---~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~ 283 (623)
...+ ......+....|+|||++|+....+. .|.++|+..+
T Consensus 151 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~ 193 (366)
T 3k26_A 151 -VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH--------SLKLWRINSK 193 (366)
T ss_dssp -EEEECSTTSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEESCSH
T ss_pred -EEEecccccccCceeEEEECCCCCEEEEecCCC--------CEEEEECCCC
Confidence 2233 23334566788999999888766332 3788888754
No 376
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.40 E-value=1.6e-05 Score=80.46 Aligned_cols=226 Identities=10% Similarity=0.020 Sum_probs=120.6
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccC-CCCCcc----c-----eeeee-cCCceEEEeC--C
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDIT-PKEYAV----R-----TTAQE-YGGGAFRIFG--D 155 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~-p~~~~~----r-----~~~~~-~g~~~~~~s~--d 155 (623)
..++++.+++++.++|++.. +++ |++++..++ ..+... +..+.- . ..... .....+++++ +
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~---~~~--i~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQ---DGR--VIKYEGPNS-GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp SCCCCEECCTTCSSEEEECT---TSE--EEEECCTTT-CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred CCceEEEEcCCCCEEEEEcC---CCe--EEEECCCCC-ceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 45678899876677888754 233 667765521 222111 111000 0 00000 0012345553 4
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCC-CCCEEEEEEeccCCC---------CCCceeEEE
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDP-RFNRYVTVREDRRQD---------ALNSTTEIV 224 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~---------~~~~~~~L~ 224 (623)
.|++.+.. +.|++++.+++ ..+.+... .+.+..+.++..++| +|+ |++........ .......|+
T Consensus 93 ~l~v~d~~-~~i~~~d~~~g--~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 93 QLYIVDCY-YHLSVVGSEGG--HATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp EEEEEETT-TEEEEECTTCE--ECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred cEEEEECC-CCEEEEeCCCC--EEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEE
Confidence 67776544 44999998765 44444322 111112456788999 996 43333211000 001237899
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCc
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (623)
++|.++++ .+.+..+.......+|+|||++|++.... ..+|+++++++... .....+.... . +.
T Consensus 169 ~~d~~~~~---~~~~~~~~~~p~gia~~~dg~~lyv~d~~-------~~~I~~~~~~~~~~-~~~~~~~~~~----g-P~ 232 (322)
T 2fp8_A 169 KYDPSTKE---TTLLLKELHVPGGAEVSADSSFVLVAEFL-------SHQIVKYWLEGPKK-GTAEVLVKIP----N-PG 232 (322)
T ss_dssp EEETTTTE---EEEEEEEESCCCEEEECTTSSEEEEEEGG-------GTEEEEEESSSTTT-TCEEEEEECS----S-EE
T ss_pred EEeCCCCE---EEEeccCCccCcceEECCCCCEEEEEeCC-------CCeEEEEECCCCcC-CccceEEeCC----C-CC
Confidence 99998876 44444333445567899999988877532 34699999875311 1222222222 2 45
Q ss_pred CceeCCCCcEEEEEeCC--------CCeeeEEEEecCCCeEEEEe
Q 006979 305 EPKWSSKGELFFVTDRK--------NGFWNLHKWIESNNEVLAIY 341 (623)
Q Consensus 305 ~~~ws~DG~l~~~~~~~--------~g~~~L~~~d~~~~~~~~l~ 341 (623)
....++||.+| +++.. .....|+++|+++...+.+.
T Consensus 233 gi~~d~~G~l~-va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 233 NIKRNADGHFW-VSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp EEEECTTSCEE-EEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE
T ss_pred CeEECCCCCEE-EEecCcccccccCCCccEEEEECCCCCEEEEEE
Confidence 67888999754 44431 11467999998654444443
No 377
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.40 E-value=3.6e-05 Score=87.16 Aligned_cols=195 Identities=11% Similarity=0.071 Sum_probs=119.7
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCC--CCceecCC-CCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCC
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKD--SSPLPITP-DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG 230 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~--~~~~~Lt~-~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~ 230 (623)
.+.|||++...+.|+++++++.. ...+.+.. . ......+++++.++.|+++.... ..|+++++++
T Consensus 435 ~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~----l~~P~GLAvD~~~~~LY~tD~~~--------~~I~v~~ldG 502 (791)
T 3m0c_C 435 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----IQAPDGLAVDWIHSNIYWTDSVL--------GTVSVADTKG 502 (791)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSS----CSCCCEEEEETTTTEEEEEETTT--------TEEEEEETTS
T ss_pred CCeeEEeeccceeEEEEeccCCCCCcceeEEEecC----CCCcceeeeeecCCcEEEEecCC--------CeEEEEeCCC
Confidence 45899998888889999997520 01222222 2 12334577888898888765422 6799999998
Q ss_pred CCcccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeC
Q 006979 231 QNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (623)
Q Consensus 231 g~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 309 (623)
.. .+.|.. ......+.++.|.+.+|||..|.. ...|+++++++.. ...++...- ..+..++.+
T Consensus 503 ~~---~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~------~~~I~~~~~dG~~---~~~lv~~~l----~~P~GLavD 566 (791)
T 3m0c_C 503 VK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVD---IYSLVTENI----QWPNGITLD 566 (791)
T ss_dssp SS---EEEEEECTTCCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCC---EEEEECSSC----SCEEEEEEE
T ss_pred Ce---EEEEEeCCCCCcceEEEecCCCCEEEecCCC------CCeEEEEecCCCc---eEEEEeCCC----CCceEEEEe
Confidence 76 455543 333344567999988999997543 2469999998762 233333222 345567777
Q ss_pred CCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCC
Q 006979 310 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 389 (623)
Q Consensus 310 ~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~ 389 (623)
+++..+|+++. +...|+++++++...+.+......+..| ..+.+ .++.|||+. .+...|+++|..
T Consensus 567 ~~~~~LYwaD~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P------~glav-----~~~~lYwtD--~~~~~I~~~dk~ 631 (791)
T 3m0c_C 567 LLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP------FSLAV-----FEDKVFWTD--IINEAIFSANRL 631 (791)
T ss_dssp TTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSE------EEEEE-----ETTEEEEEE--TTTTEEEEEETT
T ss_pred cCCCeEEEEeC--CCCcEEEEecCCCceEEEecCCCccCCC------CEEEE-----eCCEEEEEE--CCCCEEEEEeCC
Confidence 76664444565 4567999999887666665432222111 12233 456888876 345678888865
Q ss_pred CC
Q 006979 390 GH 391 (623)
Q Consensus 390 ~~ 391 (623)
+|
T Consensus 632 tG 633 (791)
T 3m0c_C 632 TG 633 (791)
T ss_dssp TC
T ss_pred CC
Confidence 55
No 378
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.39 E-value=2.5e-05 Score=82.40 Aligned_cols=204 Identities=11% Similarity=0.045 Sum_probs=115.6
Q ss_pred cCCceEEEeCC--EEEEEeCCCCcEEEEeCCCCC---------CCceecCCCCCCCCeeecceeeCCCCC-EEEEEEecc
Q 006979 145 YGGGAFRIFGD--TVIFSNYKDQRLYKHSIDSKD---------SSPLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDR 212 (623)
Q Consensus 145 ~g~~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~---------~~~~~Lt~~~~~~~~~~~d~~~sPdG~-~l~~v~~~~ 212 (623)
..+.+..++++ .++++...++.|+++++.... .....+... ........|+|+++ .|+....+
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~~~d- 203 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----QKEGYGLSWNPNLNGYLLSASDD- 203 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----SSCCCCEEECTTSTTEEEEECTT-
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----CCCeEEEEeCCCCCCeEEEEeCC-
Confidence 34566777775 577777778889999986410 111222221 22345688999998 55543322
Q ss_pred CCCCCCceeEEEEEEcCCCCcc-----cceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCcee
Q 006979 213 RQDALNSTTEIVAIALNGQNIQ-----EPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY 287 (623)
Q Consensus 213 ~~~~~~~~~~L~~idl~~g~~~-----~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~ 287 (623)
+.|.++|+..+... ....+......+....|+|++..+++.... ...|+++|+..+....
T Consensus 204 --------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-------dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 204 --------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-------DQKLMIWDTRNNNTSK 268 (430)
T ss_dssp --------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET-------TSEEEEEETTCSCSSS
T ss_pred --------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC-------CCeEEEEECCCCCCCc
Confidence 45888888774210 012222233345567899955545444422 2358899988653111
Q ss_pred eeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCC-e-EEEEeecccccccccccccCcceeEEee
Q 006979 288 KRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN-E-VLAIYSLDAEFSRPLWVFGINSYEIIQS 364 (623)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~-~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~ 364 (623)
....+.... ..+..+.|+|+++ +++.... +|. |..+|.... . ...+......+....|.+
T Consensus 269 ~~~~~~~~~----~~v~~i~~~p~~~~~l~tg~~-dg~--v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp---------- 331 (430)
T 2xyi_A 269 PSHTVDAHT----AEVNCLSFNPYSEFILATGSA-DKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSP---------- 331 (430)
T ss_dssp CSEEEECCS----SCEEEEEECSSCTTEEEEEET-TSE--EEEEETTCTTSCSEEEECCSSCEEEEEECS----------
T ss_pred ceeEeecCC----CCeEEEEeCCCCCCEEEEEeC-CCe--EEEEeCCCCCCCeEEeecCCCCEEEEEECC----------
Confidence 222333333 4567889999998 7766665 455 555565542 2 333333333333334433
Q ss_pred cCCCCEEEEEEEECCeEEEEEEe
Q 006979 365 HGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 365 s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
+++.++++...++.-.||-+.
T Consensus 332 --~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 332 --HNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp --SCTTEEEEEETTSCCEEEEGG
T ss_pred --CCCCEEEEEeCCCcEEEEeCC
Confidence 777778777777776666443
No 379
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.38 E-value=1.7e-06 Score=97.34 Aligned_cols=212 Identities=10% Similarity=0.056 Sum_probs=123.3
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCC---CCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKA---GDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK 163 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~---gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~ 163 (623)
...+.++.|++ ++.|||.+... ++ |++++..+ +.....++.... ..-.+.++.+..+.||+++..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~---~~--I~~~~~~g~~~~~~~~~~i~~~~------~~P~glavD~~~g~LY~tD~~ 473 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQ---RM--ICSTQLDRAHGVSSYDTVISRDI------QAPDGLAVDWIHSNIYWTDSV 473 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTT---TS--BEEEESCCCCC-CCCCCBCCSCC--------CCCEECCCSSSBCEECCTT
T ss_pred CcceEEEccccccCeEEEEecCC---Ce--EEEEecCCCCCCcceEEEEeCCC------CCcceEEEEeeCCcEEEEecc
Confidence 34567889998 89999998653 33 55555442 112222222211 011122233334578888777
Q ss_pred CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc-cC
Q 006979 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV-SG 242 (623)
Q Consensus 164 ~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~-~~ 242 (623)
.++|+++++++. ..+.+.... .....+++++|++++|+++.... ...|+++++++.. .+.+. ..
T Consensus 474 ~~~I~v~d~dg~--~~~~l~~~~---~~~P~giavDp~~g~ly~td~~~-------~~~I~~~~~dG~~---~~~l~~~~ 538 (699)
T 1n7d_A 474 LGTVSVADTKGV--KRKTLFREQ---GSKPRAIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVD---IYSLVTEN 538 (699)
T ss_dssp TSCEEEEBSSSC--CEEEECCCS---SCCCCCEECCSSSSCCEECCCSS-------SCCEEBCCSSSCC---CCEESCSS
T ss_pred CCeEEEEecCCC--ceEEEEeCC---CCCcceEEEccCCCcEEEcccCC-------CCeEEEEeCCCCC---eeEEEeCC
Confidence 788999999865 444443320 12345678999888777754321 1569999998765 33443 33
Q ss_pred CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCC
Q 006979 243 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 322 (623)
Q Consensus 243 ~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~ 322 (623)
..+..+.+|+|++++|||+... ...|+++++++. .++.+...... ...+..+....+ .+|| ++.
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~-------~~~I~~~d~dG~----~~~~~~~~~~~-~~~P~glavd~~-~lyw-td~-- 602 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSK-------LHSISSIDVNGG----NRKTILEDEKR-LAHPFSLAVFED-KVFW-TDI-- 602 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETT-------TTEEEEECSSSS----CCEEECCCSSS-CSSCCCCEEETT-EEEE-ECS--
T ss_pred CCCccEEEEeccCCEEEEEecC-------CCeEEEEccCCC----ceEEEEecCCc-CCCceEeEEECC-EEEE-EeC--
Confidence 4456678899999999998632 346999998765 23333321100 022334444332 2554 455
Q ss_pred CeeeEEEEecCCCeEEEEe
Q 006979 323 GFWNLHKWIESNNEVLAIY 341 (623)
Q Consensus 323 g~~~L~~~d~~~~~~~~l~ 341 (623)
+...|.++++.+++...+.
T Consensus 603 ~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 603 INEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp TTTCEEEEETTTEEEEECC
T ss_pred CCCeEEEEEccCCCceEEe
Confidence 4457999998777655443
No 380
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.38 E-value=1.7e-05 Score=87.14 Aligned_cols=201 Identities=8% Similarity=0.051 Sum_probs=118.3
Q ss_pred eeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC----CcccceecccCCCc-ccceeeCC--CCCEEEEEEe
Q 006979 191 VSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ----NIQEPKVLVSGSDF-YAFPRMDP--RGERMAWIEW 263 (623)
Q Consensus 191 ~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g----~~~~~~~l~~~~~~-~~~p~wSP--DG~~la~~~~ 263 (623)
.......|||||++|++... ..+.++|++++ +. ...+....+. +...+||| ||++|+....
T Consensus 19 ~~v~~~~~spdg~~l~~~~~----------~~v~v~~~~~~~~~~~~--~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~ 86 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG----------KSAFVRCLDDGDSKVPP--VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE 86 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET----------TEEEEEECCSSCCSSCS--EEEECTTTTSCEEEEEECSSTTCCEEEEEET
T ss_pred CceeEEEECCCCCEEEEecC----------CeEEEEECCCCCCcccc--ceEEecCCCceEEEEEECcCCCCCEEEEecC
Confidence 34567889999999988762 45888898876 41 4455555555 67789999 9999887653
Q ss_pred cCCCCCCCceEEEEEEecCC------CceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCe
Q 006979 264 HHPNMPWDKAELWVGYISEN------GDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNE 336 (623)
Q Consensus 264 ~~~~~p~~~~~L~v~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~ 336 (623)
+ ..|.++++..+ .. .....+.... ..+....|+|||+ ++...........|+.+|. +..
T Consensus 87 d--------g~v~vw~~~~~~~~~~~~~-~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~ 152 (615)
T 1pgu_A 87 S--------GKVIVWGWTFDKESNSVEV-NVKSEFQVLA----GPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNS 152 (615)
T ss_dssp T--------SEEEEEEEEEEGGGTEEEE-EEEEEEECCS----SCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCE
T ss_pred C--------CEEEEEeCCCCcccccccc-cccchhhccc----ccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCc
Confidence 3 24777777533 11 1222333333 4677889999999 5555443233467777772 333
Q ss_pred EEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccCCc---ceEee--eec-
Q 006979 337 VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFT---DIDNI--TLG- 409 (623)
Q Consensus 337 ~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~~~---~v~~~--~~~- 409 (623)
...+......+... .|. |+++.++++...++.-++ +|..+++.. .+..... .+..+ +++
T Consensus 153 ~~~~~~~~~~v~~~---------~~~---~~~~~~l~~~~~d~~v~v--wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 153 LGEVSGHSQRINAC---------HLK---QSRPMRSMTVGDDGSVVF--YQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp EEECCSCSSCEEEE---------EEC---SSSSCEEEEEETTTEEEE--EETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred ceeeecCCccEEEE---------EEC---CCCCcEEEEEeCCCcEEE--EeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence 33333222222222 332 266656666666666555 466655443 3443333 45555 566
Q ss_pred CCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 410 NDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 410 ~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
++.++ ++.. ...|+.+++.+++
T Consensus 219 ~~~l~-~~~~---dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 219 GEFVI-TVGS---DRKISCFDGKSGE 240 (615)
T ss_dssp CCEEE-EEET---TCCEEEEETTTCC
T ss_pred CCEEE-EEeC---CCeEEEEECCCCC
Confidence 55444 4432 2467888877765
No 381
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.37 E-value=0.00019 Score=73.44 Aligned_cols=268 Identities=10% Similarity=0.019 Sum_probs=141.6
Q ss_pred cCCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 87 ASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
....+..+.|+|++.....-. ++|...+|..... .....+.. +.....+..++++ ..+.+...++
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s---~Dg~v~vWd~~~~---~~~~~~~~--------~~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSS---QDGKVIVWDSFTT---NKEHAVTM--------PCTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTC---CEEEEEEC--------SSSCCCEEEECTTSSEEEEESTTS
T ss_pred CCCeEEEEEECCCCCEEEEEe---CCCeEEEEECCCC---CcceEEec--------CCCCEEEEEECCCCCEEEEeeCCC
Confidence 344567788888333333332 2577777754322 21111111 1111344555555 4556666778
Q ss_pred cEEEEeCCCCCCC-----ceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc
Q 006979 166 RLYKHSIDSKDSS-----PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (623)
Q Consensus 166 ~l~~~d~~~g~~~-----~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~ 240 (623)
.+.++++...... ...+... ........|+|+++.|+....+ ..+.++|+.+++. ...+.
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~t~s~D---------~~v~lwd~~~~~~--~~~~~ 193 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMH----TNYLSACSFTNSDMQILTASGD---------GTCALWDVESGQL--LQSFH 193 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEEC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCCE--EEEEE
T ss_pred CEEEEEEeccccccccccceeeecc----CCcEEEEEEeCCCCEEEEEeCC---------CcEEEEeCCCCeE--EEEEc
Confidence 8888877543000 1111111 2234567899999988876554 5688889988762 23343
Q ss_pred cCCCcccceeeCC--CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEE
Q 006979 241 SGSDFYAFPRMDP--RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVT 318 (623)
Q Consensus 241 ~~~~~~~~p~wSP--DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~ 318 (623)
.....+....|+| +|+.|+-...|. .|.++|+..+. ....+.+.. ..+....|+|+|++++..
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg--------~v~~wd~~~~~---~~~~~~~h~----~~v~~v~~~p~~~~l~s~ 258 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDK--------KAMVWDMRSGQ---CVQAFETHE----SDVNSVRYYPSGDAFASG 258 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTS--------CEEEEETTTCC---EEEEECCCS----SCEEEEEECTTSSEEEEE
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCC--------eEEEEECCCCc---EEEEecCCC----CCeEEEEEeCCCCEEEEE
Confidence 3333344456766 678777665333 38888988763 333444444 456788999999855555
Q ss_pred eCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCc-eeecc
Q 006979 319 DRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLD 397 (623)
Q Consensus 319 ~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~-~~~lt 397 (623)
.. ++. +..+|+.+++...+....... .+.....|. ++++. +++...++.-+| +|+.+++ +..+.
T Consensus 259 s~-D~~--v~lwd~~~~~~~~~~~~~~~~------~~~~~~~~s---~~g~~-l~~g~~d~~i~v--wd~~~~~~~~~l~ 323 (354)
T 2pbi_B 259 SD-DAT--CRLYDLRADREVAIYSKESII------FGASSVDFS---LSGRL-LFAGYNDYTINV--WDVLKGSRVSILF 323 (354)
T ss_dssp ET-TSC--EEEEETTTTEEEEEECCTTCC------SCEEEEEEC---TTSSE-EEEEETTSCEEE--EETTTCSEEEEEC
T ss_pred eC-CCe--EEEEECCCCcEEEEEcCCCcc------cceeEEEEe---CCCCE-EEEEECCCcEEE--EECCCCceEEEEE
Confidence 44 454 445566666544333221100 011122333 26554 444545665444 5765554 34444
Q ss_pred cCCcceEee--eecCCEE
Q 006979 398 IPFTDIDNI--TLGNDCL 413 (623)
Q Consensus 398 ~~~~~v~~~--~~~~~~~ 413 (623)
.....+..+ ++++..+
T Consensus 324 ~h~~~v~~l~~spdg~~l 341 (354)
T 2pbi_B 324 GHENRVSTLRVSPDGTAF 341 (354)
T ss_dssp CCSSCEEEEEECTTSSCE
T ss_pred CCCCcEEEEEECCCCCEE
Confidence 444445555 5555543
No 382
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.37 E-value=1.4e-06 Score=86.56 Aligned_cols=105 Identities=17% Similarity=0.074 Sum_probs=68.7
Q ss_pred CCEEEEecCCCCCccc-CcCCHHhHHHHcC--ceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCC
Q 006979 495 PPLLVKSHGGPTSEAR-GILNLSIQYWTSR--GWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKA 571 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~-~~~~~~~~~~a~~--G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~ 571 (623)
.| ||++||....... ..|...+.+++++ ||.|+.+|+ |.|........ +-....+++...++++......
T Consensus 6 ~p-vVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~-----~~~~~~~~~~~~~~~l~~~~~l 78 (279)
T 1ei9_A 6 LP-LVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENS-----FFLNVNSQVTTVCQILAKDPKL 78 (279)
T ss_dssp CC-EEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHH-----HHSCHHHHHHHHHHHHHSCGGG
T ss_pred Cc-EEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccc-----cccCHHHHHHHHHHHHHhhhhc
Confidence 45 7889998544322 3677788888875 889999997 64422111110 1012234444555555543212
Q ss_pred CCCceEEEEcChHHHHHHHHh-cCCCc-eeEEEecccC
Q 006979 572 DEKRLCITGGSAGGYTTLAAL-AFRDT-FKAGASLYGV 607 (623)
Q Consensus 572 d~~rv~i~G~S~GG~~~~~~~-~~~~~-f~a~v~~~g~ 607 (623)
.+++.++||||||.++..++ .+|+. ++..|+..+.
T Consensus 79 -~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 79 -QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp -TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred -cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 27999999999999999999 78884 9999977653
No 383
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.37 E-value=8e-05 Score=75.03 Aligned_cols=243 Identities=9% Similarity=-0.021 Sum_probs=127.3
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcE
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l 167 (623)
..+..+.++|++.....-.. ++...+|....+ +....+. -|...+.+..++++ .++++...++.|
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~---D~~v~~wd~~~~---~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~D~~i 131 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASW---DKTLRLWDVATG---ETYQRFV--------GHKSDVMSVDIDKKASMIISGSRDKTI 131 (319)
T ss_dssp SCEEEEEECTTSSEEEEEET---TSEEEEEETTTT---EEEEEEE--------CCSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ccEEEEEECCCCCEEEEEeC---CCEEEEEECCCC---CeeEEEc--------cCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 34456778873333333322 466666654322 2211111 01222345556655 566677778889
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCCC------CCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPR------FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS 241 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPd------G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~ 241 (623)
.++|+.+. ....+... ........++|+ +..++....+ ..+.+.|+.+++. ...+..
T Consensus 132 ~vwd~~~~--~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~--~~~~~~ 194 (319)
T 3frx_A 132 KVWTIKGQ--CLATLLGH----NDWVSQVRVVPNEKADDDSVTIISAGND---------KMVKAWNLNQFQI--EADFIG 194 (319)
T ss_dssp EEEETTSC--EEEEECCC----SSCEEEEEECCC------CCEEEEEETT---------SCEEEEETTTTEE--EEEECC
T ss_pred EEEECCCC--eEEEEecc----CCcEEEEEEccCCCCCCCccEEEEEeCC---------CEEEEEECCcchh--heeecC
Confidence 99998754 33444332 233455677774 3355544433 4578889887651 223333
Q ss_pred CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCC
Q 006979 242 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRK 321 (623)
Q Consensus 242 ~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~ 321 (623)
....+....|||||++|+-...| ..|.+.|+..+. ....+... ..+....|+|||.++.....
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~d--------g~i~iwd~~~~~---~~~~~~~~-----~~v~~~~~sp~~~~la~~~~- 257 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKD--------GEIMLWNLAAKK---AMYTLSAQ-----DEVFSLAFSPNRYWLAAATA- 257 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETT--------CEEEEEETTTTE---EEEEEECC-----SCEEEEEECSSSSEEEEEET-
T ss_pred CCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCc---EEEEecCC-----CcEEEEEEcCCCCEEEEEcC-
Confidence 34455667899999988866533 348888988762 22333332 34567899999985555544
Q ss_pred CCeeeEEEEecCCCeEE-EEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 322 NGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 322 ~g~~~L~~~d~~~~~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
+...+| +.+.+... .+.+....... .-......+.|. |+++.|+ +...+|.-+||.+.
T Consensus 258 -~~i~v~--~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s---pdg~~l~-sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 258 -TGIKVF--SLDPQYLVDDLRPEFAGYSK-AAEPHAVSLAWS---ADGQTLF-AGYTDNVIRVWQVM 316 (319)
T ss_dssp -TEEEEE--EETTEEEEEEECCCCTTCCG-GGCCCEEEEEEC---TTSSEEE-EEETTSCEEEEEEE
T ss_pred -CCcEEE--EeCcCeeeeccCcccccccc-CcCcceeEEEEC---CCCCEEE-EeecCceEEEEEEe
Confidence 333444 44444322 22211110000 000011123333 3776655 45567777777554
No 384
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.36 E-value=3.9e-05 Score=76.92 Aligned_cols=205 Identities=10% Similarity=0.006 Sum_probs=110.3
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCC--C
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKD--Q 165 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~--~ 165 (623)
..++++.|++++.+||.+... ++ |++++.. ++........ .. ...++++++ .+++.+... .
T Consensus 32 ~~pegia~~~~g~lyv~d~~~---~~--I~~~d~~--g~~~~~~~~~----~~-----p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEV---GE--IVSITPD--GNQQIHATVE----GK-----VSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTT---TE--EEEECTT--CCEEEEEECS----SE-----EEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCC---Ce--EEEECCC--CceEEEEeCC----CC-----ceeEEEcCCCcEEEEeccCCcc
Confidence 457889998866799998542 33 7777765 2322222111 00 123445544 676665432 2
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeec-ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccccee----c-
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYA-DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV----L- 239 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~-d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~----l- 239 (623)
+|++++..++ ..+.+.... ..++. .....+++ .+++ .+.. ...||++|.++++.. +.. +
T Consensus 96 ~v~~~d~~~g--~~~~~~~~~---~~~~~~g~~~~~~~-~~~v-~d~~-------~g~i~~~d~~~~~~~-v~~~~~~~~ 160 (306)
T 2p4o_A 96 PVVSLVKSDG--TVETLLTLP---DAIFLNGITPLSDT-QYLT-ADSY-------RGAIWLIDVVQPSGS-IWLEHPMLA 160 (306)
T ss_dssp EEEEEECTTS--CEEEEEECT---TCSCEEEEEESSSS-EEEE-EETT-------TTEEEEEETTTTEEE-EEEECGGGS
T ss_pred eEEEEcCCCC--eEEEEEeCC---CccccCcccccCCC-cEEE-EECC-------CCeEEEEeCCCCcEe-EEEECCccc
Confidence 4888887776 554443221 12222 23334444 4444 3311 157999998765200 110 0
Q ss_pred --ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEE
Q 006979 240 --VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFV 317 (623)
Q Consensus 240 --~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~ 317 (623)
.....+...-..+|||++|++.... ..+|++++++..+.+.....+... ..+..+..++||++ |+
T Consensus 161 ~~~~~~~~~~pngis~dg~~lyv~d~~-------~~~I~~~~~~~~g~~~~~~~~~~~-----~~P~gi~vd~dG~l-~v 227 (306)
T 2p4o_A 161 RSNSESVFPAANGLKRFGNFLYVSNTE-------KMLLLRIPVDSTDKPGEPEIFVEQ-----TNIDDFAFDVEGNL-YG 227 (306)
T ss_dssp CSSTTCCSCSEEEEEEETTEEEEEETT-------TTEEEEEEBCTTSCBCCCEEEEES-----CCCSSEEEBTTCCE-EE
T ss_pred cccccCCCCcCCCcCcCCCEEEEEeCC-------CCEEEEEEeCCCCCCCccEEEecc-----CCCCCeEECCCCCE-EE
Confidence 0011121111249999999877532 446999999763332233333221 23457899999975 56
Q ss_pred EeCCCCeeeEEEEecCCCeEEEE
Q 006979 318 TDRKNGFWNLHKWIESNNEVLAI 340 (623)
Q Consensus 318 ~~~~~g~~~L~~~d~~~~~~~~l 340 (623)
++. +..+|.++|++ ++...+
T Consensus 228 a~~--~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 228 ATH--IYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp ECB--TTCCEEEECTT-CCEEEE
T ss_pred EeC--CCCeEEEECCC-CCEEEE
Confidence 665 44578899986 444333
No 385
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.35 E-value=1.8e-05 Score=83.28 Aligned_cols=159 Identities=8% Similarity=0.047 Sum_probs=87.9
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCC------------ceecCCCCCCCC----------eeecceeeCCCC-
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSS------------PLPITPDYGEPL----------VSYADGIFDPRF- 202 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~------------~~~Lt~~~~~~~----------~~~~d~~~sPdG- 202 (623)
+.+..++++ .++++...++.|.++++.++ . ...+... .+. .......|+|++
T Consensus 31 V~~v~~s~~g~~la~g~~dg~v~iw~~~~~--~~~~~~~~~~~~~~~~~~~h--~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 31 ISTVEFNHSGELLATGDKGGRVVIFQQEQE--NKIQSHSRGEYNVYSTFQSH--EPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECC-------CCCCCCEEEEEEEECC--CCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEecCC--CCCCcccccceeEecccccc--cccccccccccccCceEEEEEcCCCC
Confidence 445566655 45556667888999998765 2 1222211 000 335678899998
Q ss_pred -CEEEEEEeccCCCCCCceeEEEEEEcCCCCcc-------------------------------------cceec-ccCC
Q 006979 203 -NRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-------------------------------------EPKVL-VSGS 243 (623)
Q Consensus 203 -~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~-------------------------------------~~~~l-~~~~ 243 (623)
..++....+ ..|.++|+.++... ..+.+ ....
T Consensus 107 ~~~l~s~s~d---------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 107 AAQFLLSTND---------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp SSEEEEEECS---------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred cceEEEeCCC---------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 677666544 23455555432200 00011 1223
Q ss_pred CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE-------EcCCCCCccccCcCceeCCCC-cEE
Q 006979 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-------VAGFDPTIVESPTEPKWSSKG-ELF 315 (623)
Q Consensus 244 ~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ws~DG-~l~ 315 (623)
..+...+|+|||++|+.. .| ..|.++|+...+. .... +.+.. ..+....|+|+| +++
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d--------~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l 242 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD--------LRINLWHLEITDR--SFNIVDIKPANMEELT----EVITAAEFHPNSCNTF 242 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS--------SEEEEEETTEEEE--EEEEEECCCSSGGGCC----CCEEEEEECSSCTTEE
T ss_pred cceEEEEEcCCCCEEEEe-CC--------CeEEEEECCCCCc--eeeeeecccccccccC----cceEEEEECCCCCcEE
Confidence 345567899999988754 22 2488888874321 1111 12222 456788999999 666
Q ss_pred EEEeCCCCeeeEEEEecCCCe
Q 006979 316 FVTDRKNGFWNLHKWIESNNE 336 (623)
Q Consensus 316 ~~~~~~~g~~~L~~~d~~~~~ 336 (623)
+.... ++ .|..+|..+++
T Consensus 243 ~s~~~-dg--~i~iwd~~~~~ 260 (447)
T 3dw8_B 243 VYSSS-KG--TIRLCDMRASA 260 (447)
T ss_dssp EEEET-TS--CEEEEETTTCS
T ss_pred EEEeC-CC--eEEEEECcCCc
Confidence 55554 45 45556766665
No 386
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.35 E-value=7e-05 Score=78.58 Aligned_cols=239 Identities=9% Similarity=0.006 Sum_probs=131.5
Q ss_pred eEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 149 ~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
...|+.+.++.+. .++.|+++|+.+| ...++.... .....+...+|+|||++|+....+ ..|.++|+
T Consensus 110 ~l~wS~~n~lAvg-ld~tV~lWd~~tg--~~~~~~~~~-~~~~~V~sv~fspdg~~lasgs~D---------g~v~iWd~ 176 (420)
T 4gga_A 110 LVDWSSGNVLAVA-LDNSVYLWSASSG--DILQLLQME-QPGEYISSVAWIKEGNYLAVGTSS---------AEVQLWDV 176 (420)
T ss_dssp CEEECTTSEEEEE-ETTEEEEEETTTC--CEEEEEECC-STTCCEEEEEECTTSSEEEEEETT---------SCEEEEET
T ss_pred eEEECCCCEEEEE-eCCEEEEEECCCC--CEEEEEEec-CCCCcEEEEEECCCCCEEEEEECC---------CeEEEEEc
Confidence 4566666454444 4778999999987 444332210 113346788999999988876554 45888899
Q ss_pred CCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 229 ~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
.+++. ++.+....... -.+++|++.|+....+ ..+++.+...... ....+.+.. ..+....|
T Consensus 177 ~~~~~--~~~~~~h~~~v--~~~s~~~~~l~sgs~d--------~~i~~~d~~~~~~--~~~~~~~h~----~~~~~~~~ 238 (420)
T 4gga_A 177 QQQKR--LRNMTSHSARV--GSLSWNSYILSSGSRS--------GHIHHHDVRVAEH--HVATLSGHS----QEVCGLRW 238 (420)
T ss_dssp TTTEE--EEEECCCSSCE--EEEEEETTEEEEEETT--------SEEEEEETTSSSC--EEEEEECCS----SCEEEEEE
T ss_pred CCCcE--EEEEeCCCCce--EEEeeCCCEEEEEeCC--------CceeEeeecccce--eeEEecccc----cceeeeee
Confidence 88762 23333222222 2466788877655422 2477777765532 233344444 45667889
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeE-----EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEV-----LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~-----~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
+++|++++.... ++.-.|| +..+++. .........+....|.+ .+..++.+........|
T Consensus 239 ~~~g~~l~s~~~-D~~v~i~--~~~~~~~~~~~~~~~~~~~~~V~~~~~~p------------~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 239 APDGRHLASGGN-DNLVNVW--PSAPGEGGWVPLQTFTQHQGAVKAVAWCP------------WQSNVLATGGGTSDRHI 303 (420)
T ss_dssp CTTSSEEEEEET-TSCEEEE--ESSCCSSCSCCSEEECCCSSCEEEEEECT------------TCTTEEEEEECTTTCEE
T ss_pred cCCCCeeeeeec-cccceEE--eeccccccceeeeeecccCCceeeeeeCC------------CcccEEEEEeecCCCEE
Confidence 999985544443 4554444 4444321 11112222222223332 55555555432223346
Q ss_pred EEEeCCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 384 GILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 384 ~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.++|+.+++..........+..+ .++++.++...... ...|++.++.+++
T Consensus 304 ~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~--d~~I~iwd~~~~~ 355 (420)
T 4gga_A 304 RIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA--QNQLVIWKYPTMA 355 (420)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTT--TCCEEEEETTTCC
T ss_pred EEEeCCccccceeeccccceeeeeecCCCCeEEEEEecC--CCEEEEEECCCCc
Confidence 66688777654332222333333 66777766554322 2467888887765
No 387
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.34 E-value=0.00011 Score=75.31 Aligned_cols=192 Identities=10% Similarity=0.027 Sum_probs=109.1
Q ss_pred ceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCC--CCCEEEEEEeccCCCCCCceeEEE
Q 006979 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 148 ~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sP--dG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
....++++ ..+++...++.|.++|+.++ .....+... ........++| +|+.++....+ ..+.
T Consensus 158 ~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-~~~~~~~~h----~~~v~~~~~~~~~~g~~l~sgs~D---------g~v~ 223 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGDGTCALWDVESG-QLLQSFHGH----GADVLCLDLAPSETGNTFVSGGCD---------KKAM 223 (354)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEETTTC-CEEEEEECC----SSCEEEEEECCCSSCCEEEEEETT---------SCEE
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEcCC----CCCeEEEEEEeCCCCCEEEEEeCC---------CeEE
Confidence 34455544 34556667888999999876 223334322 22334455655 67777665544 4588
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCc
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (623)
++|+.+++. +..+......+...+|+|||+.|+-...|. .|.++|+..+. ....+...... ..+.
T Consensus 224 ~wd~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~--------~v~lwd~~~~~---~~~~~~~~~~~--~~~~ 288 (354)
T 2pbi_B 224 VWDMRSGQC--VQAFETHESDVNSVRYYPSGDAFASGSDDA--------TCRLYDLRADR---EVAIYSKESII--FGAS 288 (354)
T ss_dssp EEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE---EEEEECCTTCC--SCEE
T ss_pred EEECCCCcE--EEEecCCCCCeEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCc---EEEEEcCCCcc--ccee
Confidence 889988762 233333344566788999999888666443 27888887652 22233222101 2445
Q ss_pred CceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE-EEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 305 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 305 ~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~-~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
...|+|||++++.... ++. |..+|..+++.. .+......+....|+ |+++.| ++...++.-+|
T Consensus 289 ~~~~s~~g~~l~~g~~-d~~--i~vwd~~~~~~~~~l~~h~~~v~~l~~s------------pdg~~l-~sgs~D~~v~v 352 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYN-DYT--INVWDVLKGSRVSILFGHENRVSTLRVS------------PDGTAF-CSGSWDHTLRV 352 (354)
T ss_dssp EEEECTTSSEEEEEET-TSC--EEEEETTTCSEEEEECCCSSCEEEEEEC------------TTSSCE-EEEETTSEEEE
T ss_pred EEEEeCCCCEEEEEEC-CCc--EEEEECCCCceEEEEECCCCcEEEEEEC------------CCCCEE-EEEcCCCCEEe
Confidence 7889999996665554 344 555676665533 333222233333333 266544 44545666555
Q ss_pred E
Q 006979 384 G 384 (623)
Q Consensus 384 ~ 384 (623)
|
T Consensus 353 W 353 (354)
T 2pbi_B 353 W 353 (354)
T ss_dssp E
T ss_pred c
Confidence 4
No 388
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.34 E-value=0.00022 Score=73.75 Aligned_cols=204 Identities=9% Similarity=0.038 Sum_probs=108.4
Q ss_pred eEEEeCC--EEEEEeCC-CCcEEEEeCCCCCCCcee-cCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 149 AFRIFGD--TVIFSNYK-DQRLYKHSIDSKDSSPLP-ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 149 ~~~~s~d--~l~f~~~~-~~~l~~~d~~~g~~~~~~-Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
.+.+++| .+++.+.. ++.|+++| +++ ..... +... .+ ..+.|+|++.++..... +.+.
T Consensus 129 ~~~~spDG~~l~v~n~~~~~~v~viD-~t~-~~~~~~i~~~----~~----~~~~~~~~~~~~~~~~d--------g~~~ 190 (373)
T 2mad_H 129 MNANTPNNADLLFFQFAAGPAVGLVV-QGG-SSDDQLLSSP----TC----YHIHPGAPSTFYLLCAQ--------GGLA 190 (373)
T ss_pred ceEECCCCCEEEEEecCCCCeEEEEE-CCC-CEEeEEcCCC----ce----EEEEeCCCceEEEEcCC--------CCEE
Confidence 4555555 67777654 56799999 877 22233 3221 11 34557776654443321 4577
Q ss_pred EEEcCCCCcccceec------ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCc-e-eeeEEEcCC-
Q 006979 225 AIALNGQNIQEPKVL------VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-V-YKRVCVAGF- 295 (623)
Q Consensus 225 ~idl~~g~~~~~~~l------~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~-~-~~~~~~~~~- 295 (623)
++|. +++. .... .........|.+++|+.+++|+. . ...++++|+.++.. + ....+....
T Consensus 191 ~vd~-~g~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~-------~~~v~vid~~~~~~~v~~~~~~~~~~~ 259 (373)
T 2mad_H 191 KTDH-AGGA--AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-Y-------SGKILQADISAAGATNKAPIDALSGGR 259 (373)
T ss_pred EEEC-CCcE--EEEEeccccccCCcceeecceeEecCCEEEEEc-C-------CceEEEEeccCCcceEeeeeeecCCcc
Confidence 7888 6552 1111 11112234578899999888886 2 22599999876521 1 111111110
Q ss_pred -CCCcc-ccCcCceeCCCCc-EEEEEeCC------CCeeeEEEEecCCCeE-EEEeecccccccccccccCcceeEEeec
Q 006979 296 -DPTIV-ESPTEPKWSSKGE-LFFVTDRK------NGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSH 365 (623)
Q Consensus 296 -~~~~~-~~~~~~~ws~DG~-l~~~~~~~------~g~~~L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s 365 (623)
...|. .......+++||+ +|...+.. .+...|+.+|+.+++. +.+..+ .... .+.+.
T Consensus 260 ~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~---------~i~~s--- 326 (373)
T 2mad_H 260 KADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVD---------AISVA--- 326 (373)
T ss_pred cccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcC---------eEEEC---
Confidence 00100 1112256788988 55443321 1234799999988875 444322 1112 22332
Q ss_pred CCCCEEEEEEEECCeEEEEEEeCCCCceee
Q 006979 366 GEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (623)
Q Consensus 366 ~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~ 395 (623)
+|++.++++.+. +...|.++|.+++++..
T Consensus 327 ~Dg~~~l~v~~~-~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 327 QDGGPDLYALSA-GTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCCCeEEEEEcC-CCCeEEEEECCCCCEEe
Confidence 388855555532 34579999998877653
No 389
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.34 E-value=3.5e-05 Score=78.69 Aligned_cols=221 Identities=10% Similarity=-0.038 Sum_probs=119.2
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCC-ccceeeeecCCceEEEeCC-EEEEEeCC---
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEY-AVRTTAQEYGGGAFRIFGD-TVIFSNYK--- 163 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~-~~r~~~~~~g~~~~~~s~d-~l~f~~~~--- 163 (623)
..+.++.++|++++|....+-.+ +...|+..+ . ++. ..+|... ..... -......+++++ .|++.+..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~-~~~~l~~~~-~--g~~-~~~p~~~~~~~~~--~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQ-PEMQVAELT-Q--DGL-IPFPPQSGNAIIT--FDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGC-CSCSEEEEE-T--TEE-EESCCCCSSCCCC--CSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCCCEEEEeCCCCC-CceEEEEEC-C--CCe-ecCCCcccCcccc--eeEeeEEEEcCCCcEEEEcCCCCc
Confidence 45678899886678766544322 213466665 2 222 2223210 00000 011223455554 77777644
Q ss_pred --CCcEEEEeCCCCCCC-ceecCCC--CCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccccee
Q 006979 164 --DQRLYKHSIDSKDSS-PLPITPD--YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (623)
Q Consensus 164 --~~~l~~~d~~~g~~~-~~~Lt~~--~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~ 238 (623)
..+|+++|++++ . .+.+... ...+..+.++.+++|++.++++...... ....|+++|+++++ ...
T Consensus 90 ~~~~~i~~~d~~tg--~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~-----~~~~i~v~d~~~g~---~~r 159 (343)
T 2qe8_A 90 KSVPKLVAWDTLNN--QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD-----DKAALIRVDLQTGL---AAR 159 (343)
T ss_dssp TSCCEEEEEETTTT--EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG-----GGCEEEEEETTTCC---EEE
T ss_pred CCCCeEEEEECCCC--eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC-----CCCeEEEEECCCCC---EEE
Confidence 467999999876 3 3333221 1111234578899998766655432100 12679999998776 333
Q ss_pred cccC---------------C---------------CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecC--CCce
Q 006979 239 LVSG---------------S---------------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE--NGDV 286 (623)
Q Consensus 239 l~~~---------------~---------------~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~--~~~~ 286 (623)
+..+ . ....+.+|||||++|++.... ...||.++.+. .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~-------~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH-------STSMYRIKSADLSNLQL 232 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-------CSEEEEEEHHHHTCTTC
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-------CCeEEEEEHHHhcCCCC
Confidence 2211 0 012456799999999888643 34689988642 1110
Q ss_pred eee------EEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEe
Q 006979 287 YKR------VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (623)
Q Consensus 287 ~~~------~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~ 341 (623)
... ... +.. ......++++||.+| +++. +...|.++|+.+++.+.+.
T Consensus 233 ~~~~~~~~~~~~-g~~----g~pdgia~d~~G~l~-va~~--~~~~V~~~d~~~G~~~~~~ 285 (343)
T 2qe8_A 233 TDAELGSKIERY-SEK----PICDGISIDKDHNIY-VGDL--AHSAIGVITSADRAYKLLV 285 (343)
T ss_dssp CHHHHHTTCEEE-EEC----CSCSCEEECTTCCEE-EEEG--GGTEEEEEETTTTEEEEEE
T ss_pred ChhhhhcceEec-ccC----CCCceEEECCCCCEE-EEcc--CCCeEEEEECCCCCEEEEE
Confidence 110 111 111 234578999999655 4554 3457899998556655554
No 390
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.33 E-value=5.4e-05 Score=78.27 Aligned_cols=158 Identities=11% Similarity=0.053 Sum_probs=93.9
Q ss_pred CceEEEeC-C-EEEEEeCCCCcEEEEeCCCCCCCceecCC--------C-CCCCCeeecceeeCC-CCCEEEEEEeccCC
Q 006979 147 GGAFRIFG-D-TVIFSNYKDQRLYKHSIDSKDSSPLPITP--------D-YGEPLVSYADGIFDP-RFNRYVTVREDRRQ 214 (623)
Q Consensus 147 ~~~~~~s~-d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~--------~-~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~ 214 (623)
+.+..+++ + ..+++...++.|.++++.++ .....+.. . ............|+| +++.++....+
T Consensus 46 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--- 121 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSDGVIVLYDLENS-SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD--- 121 (408)
T ss_dssp EEEEEECTTTCCEEEEEETTSCEEEEECCCC-SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT---
T ss_pred EEEEEEecCCCCEEEEEcCCCeEEEEECCCC-cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC---
Confidence 45566665 4 56666667888999999875 12222210 0 000133466788999 66666554433
Q ss_pred CCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCC---CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE
Q 006979 215 DALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDP---RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC 291 (623)
Q Consensus 215 ~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSP---DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~ 291 (623)
..|.++|+.+++ ...............|+| +++.|+....+ ..|.++|+..+. ....
T Consensus 122 ------~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~d~~~~~---~~~~ 181 (408)
T 4a11_B 122 ------KTLKVWDTNTLQ---TADVFNFEETVYSHHMSPVSTKHCLVAVGTRG--------PKVQLCDLKSGS---CSHI 181 (408)
T ss_dssp ------SEEEEEETTTTE---EEEEEECSSCEEEEEECSSCSSCCEEEEEESS--------SSEEEEESSSSC---CCEE
T ss_pred ------CeEEEeeCCCCc---cceeccCCCceeeeEeecCCCCCcEEEEEcCC--------CeEEEEeCCCcc---eeee
Confidence 568899998876 333333333344456777 45567665533 238888988763 3334
Q ss_pred EcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCC
Q 006979 292 VAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN 335 (623)
Q Consensus 292 ~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~ 335 (623)
+.+.. ..+..+.|+|+++ +++.... +|. |..+|..++
T Consensus 182 ~~~~~----~~v~~~~~~~~~~~ll~~~~~-dg~--i~i~d~~~~ 219 (408)
T 4a11_B 182 LQGHR----QEILAVSWSPRYDYILATASA-DSR--VKLWDVRRA 219 (408)
T ss_dssp ECCCC----SCEEEEEECSSCTTEEEEEET-TSC--EEEEETTCS
T ss_pred ecCCC----CcEEEEEECCCCCcEEEEEcC-CCc--EEEEECCCC
Confidence 44444 4667889999998 6766665 454 444555443
No 391
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.33 E-value=7.7e-06 Score=82.72 Aligned_cols=233 Identities=11% Similarity=0.022 Sum_probs=131.9
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCC----ceecCCCCCCCCeeecceeeCCCCC-EEEEEEeccCCCCCCce
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDRRQDALNST 220 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~----~~~Lt~~~~~~~~~~~d~~~sPdG~-~l~~v~~~~~~~~~~~~ 220 (623)
+.+..++++ ..+++...++.|.++++.++ . ...+... ........|+|+|+ .|+....+
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~--~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d--------- 78 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQ--AKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQ--------- 78 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETT--TTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETT---------
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCC--Cccccceeeeec----CCceEEEEECCCCCcEEEEEcCC---------
Confidence 345555544 44555557788999998766 3 2333221 23466788999999 77776543
Q ss_pred eEEEEEEc-CCCCcccceeccc--CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecC---------CCceee
Q 006979 221 TEIVAIAL-NGQNIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE---------NGDVYK 288 (623)
Q Consensus 221 ~~L~~idl-~~g~~~~~~~l~~--~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~---------~~~~~~ 288 (623)
..|+++|+ .++. ...+.. ....+....|+| ++.|+....+ ..|.++|+.. +..
T Consensus 79 g~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~--- 143 (342)
T 1yfq_A 79 GEILKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWD--------GLIEVIDPRNYGDGVIAVKNLN--- 143 (342)
T ss_dssp SCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETT--------SEEEEECHHHHTTBCEEEEESC---
T ss_pred CeEEEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCC--------CeEEEEcccccccccccccCCe---
Confidence 45889999 8887 566655 445566788999 8888766533 3488888765 211
Q ss_pred eEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCC-Ce--EEEEe-ecccccccccccccCcceeEEee
Q 006979 289 RVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NE--VLAIY-SLDAEFSRPLWVFGINSYEIIQS 364 (623)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~-~~--~~~l~-~~~~~~~~~~w~~~~~~~~~l~~ 364 (623)
...+. .. ..+..+.|++++ ++... . ++ .|..+|..+ +. ..... .....+.. +.+
T Consensus 144 ~~~~~-~~----~~v~~~~~~~~~-l~~~~-~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~i~~---------i~~--- 201 (342)
T 1yfq_A 144 SNNTK-VK----NKIFTMDTNSSR-LIVGM-N-NS--QVQWFRLPLCEDDNGTIEESGLKYQIRD---------VAL--- 201 (342)
T ss_dssp SSSSS-SC----CCEEEEEECSSE-EEEEE-S-TT--EEEEEESSCCTTCCCEEEECSCSSCEEE---------EEE---
T ss_pred eeEEe-eC----CceEEEEecCCc-EEEEe-C-CC--eEEEEECCccccccceeeecCCCCceeE---------EEE---
Confidence 11111 22 456678899887 44433 3 34 456667665 33 22221 11112222 222
Q ss_pred cCCCCEEEEEEEECCeEEEEEEeCC-----CCceeecccCCc---------ceEee--eecCCEEEEEEecCCCCCeEEE
Q 006979 365 HGEKNLIACSYRQNGRSYLGILDDF-----GHSLSLLDIPFT---------DIDNI--TLGNDCLFVEGASGVEPSSVAK 428 (623)
Q Consensus 365 s~~~~~l~~~~~~~g~~~L~~~d~~-----~~~~~~lt~~~~---------~v~~~--~~~~~~~~~~~~s~~~~~~ly~ 428 (623)
+|.++.++++...+|.-+||.++.. ......+..... .+..+ +++++.++ ++.. ...|+.
T Consensus 202 ~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~---dg~i~v 277 (342)
T 1yfq_A 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGS---DGIISC 277 (342)
T ss_dssp CSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEET---TSCEEE
T ss_pred CCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE-EecC---CceEEE
Confidence 2303345555556787777777655 133333433221 45444 55555544 4432 246888
Q ss_pred EEcCCCc
Q 006979 429 VTLDDHK 435 (623)
Q Consensus 429 ~~l~~~~ 435 (623)
+++.+++
T Consensus 278 wd~~~~~ 284 (342)
T 1yfq_A 278 WNLQTRK 284 (342)
T ss_dssp EETTTTE
T ss_pred EcCccHh
Confidence 8888775
No 392
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.33 E-value=0.00024 Score=71.31 Aligned_cols=286 Identities=13% Similarity=0.059 Sum_probs=149.2
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.|+| ++.+...-.. ++...||..... +.....+.. .-.-|...+.+..++++ ..+++...++
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~---D~~i~vWd~~~~---~~~~~~~~~---~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASR---DKTIIMWKLTRD---ETNYGIPQR---ALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEET---TSCEEEEEECCS---SSCSEEEEE---EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCEEEEEEeCCCCCEEEEEcC---CCeEEEEECCCC---CcccceeeE---EEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 44567889998 5666555443 578888876543 111000000 00012233456666666 5666666788
Q ss_pred cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceec--ccCC
Q 006979 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL--VSGS 243 (623)
Q Consensus 166 ~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l--~~~~ 243 (623)
.|..++...+ ......... ........++|+++.++....+ ..+.+.|+.+.. .... ....
T Consensus 109 ~i~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~l~s~s~d---------~~~~~~d~~~~~---~~~~~~~~~~ 171 (340)
T 4aow_A 109 TLRLWDLTTG-TTTRRFVGH----TKDVLSVAFSSDNRQIVSGSRD---------KTIKLWNTLGVC---KYTVQDESHS 171 (340)
T ss_dssp EEEEEETTTT-EEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SCEEEECTTSCE---EEEECSSSCS
T ss_pred cceEEeeccc-ceeeeecCC----CCceeEEEEeecCccceeecCC---------CeEEEEEeCCCc---eEEEEecccc
Confidence 8999988754 111222211 2233445689999988766544 346677776553 2222 2223
Q ss_pred CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCC
Q 006979 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (623)
Q Consensus 244 ~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g 323 (623)
+......|++++...+++.... ...|.+.|+..+. ....+.+.. ..+....|+|||++++.... ++
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~------d~~i~i~d~~~~~---~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~-Dg 237 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGW------DKLVKVWNLANCK---LKTNHIGHT----GYLNTVTVSPDGSLCASGGK-DG 237 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEET------TSCEEEEETTTTE---EEEEECCCS----SCEEEEEECTTSSEEEEEET-TC
T ss_pred CcccceEEccCCCCcEEEEEcC------CCEEEEEECCCCc---eeeEecCCC----CcEEEEEECCCCCEEEEEeC-CC
Confidence 3455567999876544443222 1237888887762 334444444 45677899999996655554 45
Q ss_pred eeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-eccc----
Q 006979 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDI---- 398 (623)
Q Consensus 324 ~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~---- 398 (623)
. |..+|..+.+..........+.. ..+. .++.++... .++. |.++|+.++... .+..
T Consensus 238 ~--i~iwd~~~~~~~~~~~~~~~v~~---------~~~~----~~~~~~~~~-~d~~--i~iwd~~~~~~~~~~~~~~~~ 299 (340)
T 4aow_A 238 Q--AMLWDLNEGKHLYTLDGGDIINA---------LCFS----PNRYWLCAA-TGPS--IKIWDLEGKIIVDELKQEVIS 299 (340)
T ss_dssp E--EEEEETTTTEEEEEEECSSCEEE---------EEEC----SSSSEEEEE-ETTE--EEEEETTTTEEEEEECCC---
T ss_pred e--EEEEEeccCceeeeecCCceEEe---------eecC----CCCceeecc-CCCE--EEEEECCCCeEEEecccccee
Confidence 4 55567777654433332222222 2222 334444433 4554 455577665432 2221
Q ss_pred -----CCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 399 -----PFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 399 -----~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
....+..+ ++++..+ ++++.. ..|++.++++|+
T Consensus 300 ~~~~~h~~~v~~l~~s~dg~~l-~sgs~D---g~v~iW~~~tGt 339 (340)
T 4aow_A 300 TSSKAEPPQCTSLAWSADGQTL-FAGYTD---NLVRVWQVTIGT 339 (340)
T ss_dssp ----CCCCCEEEEEECTTSSEE-EEEETT---SCEEEEEEEC--
T ss_pred eeccCCCCCEEEEEECCCCCEE-EEEeCC---CEEEEEeCCCcC
Confidence 11234444 5555544 444432 346666766664
No 393
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.33 E-value=5e-05 Score=85.41 Aligned_cols=240 Identities=11% Similarity=0.009 Sum_probs=134.1
Q ss_pred CceEEEeCC--EEEEEeCCCCcEEEEeCCCCCCC----ceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCce
Q 006979 147 GGAFRIFGD--TVIFSNYKDQRLYKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 147 ~~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~----~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~ 220 (623)
+.+.+++++ .++++...|+.|.++++..+... .+.+... .....+..|+|+|++|+....+
T Consensus 385 V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h----~~~v~~v~~s~~g~~l~sgs~D--------- 451 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH----SHFVEDVVLSSDGQFALSGSWD--------- 451 (694)
T ss_dssp EEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC----SSCEEEEEECTTSSEEEEEETT---------
T ss_pred eEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC----CCcEEEEEECCCCCEEEEEeCC---------
Confidence 344455433 57777778888999998753111 1233322 3346678899999988776554
Q ss_pred eEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 221 ~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
..|.+.|+.++.. .+.+......+...+|||||++|+-.+.|. .|.+.|..+.. ...+..... ...
T Consensus 452 g~v~vwd~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~--------~i~iwd~~~~~---~~~~~~~~~-~h~ 517 (694)
T 3dm0_A 452 GELRLWDLAAGVS--TRRFVGHTKDVLSVAFSLDNRQIVSASRDR--------TIKLWNTLGEC---KYTISEGGE-GHR 517 (694)
T ss_dssp SEEEEEETTTTEE--EEEEECCSSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCE---EEEECSSTT-SCS
T ss_pred CcEEEEECCCCcc--eeEEeCCCCCEEEEEEeCCCCEEEEEeCCC--------EEEEEECCCCc---ceeeccCCC-CCC
Confidence 5688999988752 334444444566688999999988666443 26666765441 222222111 101
Q ss_pred ccCcCceeCCCCc--EEEEEeCCCCeeeEEEEecCCCeEEEEe-ecccccccccccccCcceeEEeecCCCCEEEEEEEE
Q 006979 301 ESPTEPKWSSKGE--LFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ 377 (623)
Q Consensus 301 ~~~~~~~ws~DG~--l~~~~~~~~g~~~L~~~d~~~~~~~~l~-~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~ 377 (623)
..+....|+|++. +++.... ++. |..+|+.+++..... .....+....|+ |+++. +++...
T Consensus 518 ~~v~~~~~~~~~~~~~l~s~s~-d~~--v~vwd~~~~~~~~~~~~h~~~v~~v~~s------------pdg~~-l~sg~~ 581 (694)
T 3dm0_A 518 DWVSCVRFSPNTLQPTIVSASW-DKT--VKVWNLSNCKLRSTLAGHTGYVSTVAVS------------PDGSL-CASGGK 581 (694)
T ss_dssp SCEEEEEECSCSSSCEEEEEET-TSC--EEEEETTTCCEEEEECCCSSCEEEEEEC------------TTSSE-EEEEET
T ss_pred CcEEEEEEeCCCCcceEEEEeC-CCe--EEEEECCCCcEEEEEcCCCCCEEEEEEe------------CCCCE-EEEEeC
Confidence 3456788999974 4444443 454 555677666544333 222222222332 26554 445556
Q ss_pred CCeEEEEEEeCCCCceeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 378 NGRSYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 378 ~g~~~L~~~d~~~~~~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+|.-+| +|+.+++..........+..+ ++++. +++.+.+ ..|...++.+++.
T Consensus 582 Dg~i~i--wd~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 582 DGVVLL--WDLAEGKKLYSLEANSVIHALCFSPNRY-WLCAATE----HGIKIWDLESKSI 635 (694)
T ss_dssp TSBCEE--EETTTTEEEECCBCSSCEEEEEECSSSS-EEEEEET----TEEEEEETTTTEE
T ss_pred CCeEEE--EECCCCceEEEecCCCcEEEEEEcCCCc-EEEEEcC----CCEEEEECCCCCC
Confidence 666555 466665543221222335444 44443 4444432 3488888887753
No 394
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.32 E-value=3.2e-06 Score=94.99 Aligned_cols=196 Identities=12% Similarity=0.068 Sum_probs=116.5
Q ss_pred CCEEEEEeCCCCcEEEEeCCC----CCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 154 GDTVIFSNYKDQRLYKHSIDS----KDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~----g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
.+.|||++...++|+++++++ . .....+... ......+++++.++.|+++... ...|++++++
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~-~~~~~i~~~----~~~P~glavD~~~g~LY~tD~~--------~~~I~v~d~d 483 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRD----IQAPDGLAVDWIHSNIYWTDSV--------LGTVSVADTK 483 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-C-CCCCBCCSC----C--CCCEECCCSSSBCEECCTT--------TSCEEEEBSS
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCc-ceEEEEeCC----CCCcceEEEEeeCCcEEEEecc--------CCeEEEEecC
Confidence 458888887778899999975 2 112222211 1223456778777777664321 1569999998
Q ss_pred CCCcccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 230 GQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 230 ~g~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
+.. .+.+.. +.......+++|++.+|+|..+.. ...|+++++++.. ...++...- ..+..++|
T Consensus 484 g~~---~~~l~~~~~~~P~giavDp~~g~ly~td~~~------~~~I~~~~~dG~~---~~~l~~~~l----~~PnGlav 547 (699)
T 1n7d_A 484 GVK---RKTLFREQGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVD---IYSLVTENI----QWPNGITL 547 (699)
T ss_dssp SCC---EEEECCCSSCCCCCEECCSSSSCCEECCCSS------SCCEEBCCSSSCC---CCEESCSSC----SSCCCEEE
T ss_pred CCc---eEEEEeCCCCCcceEEEccCCCcEEEcccCC------CCeEEEEeCCCCC---eeEEEeCCC----CCccEEEE
Confidence 775 444433 233345567999988898876432 2458988887652 222222221 34668999
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeC
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~ 388 (623)
+++++.+|+++. +...|+++++++...+.+......+..| ..+.+ +++.|||+. .+..+|++++.
T Consensus 548 d~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P------~glav-----d~~~lywtd--~~~~~V~~~d~ 612 (699)
T 1n7d_A 548 DLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP------FSLAV-----FEDKVFWTD--IINEAIFSANR 612 (699)
T ss_dssp CTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSC------CCCEE-----ETTEEEEEC--STTTCEEEEET
T ss_pred eccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCc------eEeEE-----ECCEEEEEe--CCCCeEEEEEc
Confidence 998774444554 4567999998876655554321111111 23333 456788776 33456788887
Q ss_pred CCCce
Q 006979 389 FGHSL 393 (623)
Q Consensus 389 ~~~~~ 393 (623)
.+++.
T Consensus 613 ~~G~~ 617 (699)
T 1n7d_A 613 LTGSD 617 (699)
T ss_dssp TTEEE
T ss_pred cCCCc
Confidence 65543
No 395
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.32 E-value=0.00051 Score=68.17 Aligned_cols=256 Identities=9% Similarity=-0.019 Sum_probs=133.0
Q ss_pred ccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC---CEEEEEeCCCC
Q 006979 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKDQ 165 (623)
Q Consensus 90 ~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~---d~l~f~~~~~~ 165 (623)
.+..+.++| +..+. .-. .++...||.....++ +....+.. |...+.+..+++ +.++++...|+
T Consensus 11 ~V~~~~~s~~g~~la-s~s---~D~~v~iw~~~~~~~-~~~~~l~g--------H~~~V~~v~~s~~~~g~~l~s~s~D~ 77 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMA-TCS---SDKTIKIFEVEGETH-KLIDTLTG--------HEGPVWRVDWAHPKFGTILASCSYDG 77 (297)
T ss_dssp CEEEEEECTTSSEEE-EEE---TTSCEEEEEBCSSCB-CCCEEECC--------CSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred ceEEEEECCCCCEEE-EEe---CCCEEEEEecCCCCc-EEEEEEcc--------ccCCeEEEEecCCCcCCEEEEEcCCC
Confidence 456778888 55443 332 247777776643211 11111111 111233444442 35667777888
Q ss_pred cEEEEeCCCCC-CCceecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccC
Q 006979 166 RLYKHSIDSKD-SSPLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSG 242 (623)
Q Consensus 166 ~l~~~d~~~g~-~~~~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~ 242 (623)
.|.++|+.++. .....+... ........|+|+ |+.|+....+ ..+.++|+.++.......+...
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~g~~l~s~s~d---------~~v~~wd~~~~~~~~~~~~~~h 144 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVH----SASVNSVQWAPHEYGPMLLVASSD---------GKVSVVEFKENGTTSPIIIDAH 144 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEEBCSSSCBCCEEEECC
T ss_pred EEEEEEcCCCceEEEEEeecC----CCceeEEEeCcCCCCcEEEEEECC---------CcEEEEEecCCCceeeeeeecc
Confidence 89999997651 011222211 234667889998 7877765554 5678888876531112223333
Q ss_pred CCcccceeeCCC-------------CCEEEEEEecCCCCCCCceEEEEEEecCCCc-eeeeEEEcCCCCCccccCcCcee
Q 006979 243 SDFYAFPRMDPR-------------GERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 243 ~~~~~~p~wSPD-------------G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
...+....|+|+ +++|+-...|. .|.+.|+..+.. ......+.+.. ..+....|
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~--------~v~lwd~~~~~~~~~~~~~l~~H~----~~V~~v~~ 212 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--------LVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAW 212 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTS--------CEEEEEEETTTTEEEEEEEECCCS----SCEEEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCC--------cEEEEEEcCCCceEEEEEEecCCC----CceEEEEE
Confidence 334556789997 46676554332 277778776532 11223344444 46778999
Q ss_pred CCCC---cEEEEEeCCCCeeeEEEEecCCCeE-EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 309 SSKG---ELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 309 s~DG---~l~~~~~~~~g~~~L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
+|++ +++..... ++.-+||.++...+.. ..+... ....... ....|. |+++.|+ +...++.-+||
T Consensus 213 sp~~~~~~~las~s~-D~~v~iWd~~~~~~~~~~~~~~~-~~~~~~v-----~~~~~s---~~g~~la-s~~~D~~v~lw 281 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQ-DRTCIIWTQDNEQGPWKKTLLKE-EKFPDVL-----WRASWS---LSGNVLA-LSGGDNKVTLW 281 (297)
T ss_dssp CCCCSSSEEEEEEET-TSCEEEEEESSTTSCCEEEESSS-SCCSSCE-----EEEEEC---SSSCCEE-EEETTSCEEEE
T ss_pred CCCCCCceEEEEEEC-CCcEEEEEeCCCCCccceeeeec-ccCCCcE-----EEEEEC---CCCCEEE-EEcCCCcEEEE
Confidence 9996 44444443 5666666554322221 222211 0111111 112222 3666554 45567888888
Q ss_pred EEeCCCCceee
Q 006979 385 ILDDFGHSLSL 395 (623)
Q Consensus 385 ~~d~~~~~~~~ 395 (623)
..+.. +.++.
T Consensus 282 ~~~~~-g~w~~ 291 (297)
T 2pm7_B 282 KENLE-GKWEP 291 (297)
T ss_dssp EECTT-SCEEE
T ss_pred EECCC-CcEEe
Confidence 77654 44443
No 396
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.32 E-value=0.00022 Score=70.81 Aligned_cols=202 Identities=9% Similarity=0.027 Sum_probs=113.7
Q ss_pred ceEEEeCC-EEEEEeCCCCcEEEEeCCCCC-CCceecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEE
Q 006979 148 GAFRIFGD-TVIFSNYKDQRLYKHSIDSKD-SSPLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 148 ~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~-~~~~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L 223 (623)
.+.+++++ ..+++...++.|.++++.++. .....+... ........|+|+ |+.|+....| ..+
T Consensus 13 ~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH----~~~V~~v~~s~~~~g~~l~s~s~D---------~~v 79 (297)
T 2pm7_B 13 HDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKV 79 (297)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------TEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc----cCCeEEEEecCCCcCCEEEEEcCC---------CEE
Confidence 34555554 456666678889999986430 122344432 234567788864 7777665544 467
Q ss_pred EEEEcCCCCcccceecccCCCcccceeeCCC--CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccc
Q 006979 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~~~~~~p~wSPD--G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~ 301 (623)
.+.|+.++.......+......+....|+|| |+.|+-...| ..|.++|+..+... ....+.+.. .
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~~~~~~-~~~~~~~h~----~ 146 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFKENGTT-SPIIIDAHA----I 146 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBCSSSCB-CCEEEECCS----S
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEecCCCce-eeeeeeccc----C
Confidence 8888887642223333333345666889998 8888766533 24788888765321 123344444 4
Q ss_pred cCcCceeCCC-------------CcEEEEEeCCCCeeeEEEEecCCCeEE---EEeecccccccccccccCcceeEEeec
Q 006979 302 SPTEPKWSSK-------------GELFFVTDRKNGFWNLHKWIESNNEVL---AIYSLDAEFSRPLWVFGINSYEIIQSH 365 (623)
Q Consensus 302 ~~~~~~ws~D-------------G~l~~~~~~~~g~~~L~~~d~~~~~~~---~l~~~~~~~~~~~w~~~~~~~~~l~~s 365 (623)
.+....|+|+ +++++.... ++.-+||.++....... .+......+....|++
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp----------- 214 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP----------- 214 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEET-TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-----------
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcC-CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-----------
Confidence 5667889987 345555544 56666665543222121 2221222223333332
Q ss_pred CCC--CEEEEEEEECCeEEEEEEeC
Q 006979 366 GEK--NLIACSYRQNGRSYLGILDD 388 (623)
Q Consensus 366 ~~~--~~l~~~~~~~g~~~L~~~d~ 388 (623)
++ +.++++...++.-+||-++.
T Consensus 215 -~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 215 -TVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -CCSSSEEEEEEETTSCEEEEEESS
T ss_pred -CCCCceEEEEEECCCcEEEEEeCC
Confidence 54 46667777788888886654
No 397
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.32 E-value=0.00024 Score=72.15 Aligned_cols=228 Identities=11% Similarity=0.035 Sum_probs=121.2
Q ss_pred EEEEEeCCCCcEEEEeCCCCCC------CceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDS------SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~------~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
.++++...|+.|.++|+..+.. ....+... ........|+|++++++....| ..+.+.|+.
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h----~~~V~~~~~~~~~~~l~s~s~D---------~~v~lwd~~ 106 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGH----NHFVSDLALSQENCFAISSSWD---------KTLRLWDLR 106 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCC----SSCEEEEEECSSTTEEEEEETT---------SEEEEEETT
T ss_pred CEEEEEcCCCEEEEEECCcCCcccccccccchhccC----CCceEEEEECCCCCEEEEEcCC---------CcEEEEECC
Confidence 5667777788888888864310 01123321 2346678899999988765544 568888998
Q ss_pred CCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeC
Q 006979 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (623)
Q Consensus 230 ~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 309 (623)
+++. ...+......+...+|||||++|+-...|. .|.+.|+.+. ......... .....+....|+
T Consensus 107 ~~~~--~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~--------~i~~wd~~~~----~~~~~~~~~-~~~~~v~~~~~~ 171 (343)
T 2xzm_R 107 TGTT--YKRFVGHQSEVYSVAFSPDNRQILSAGAER--------EIKLWNILGE----CKFSSAEKE-NHSDWVSCVRYS 171 (343)
T ss_dssp SSCE--EEEEECCCSCEEEEEECSSTTEEEEEETTS--------CEEEEESSSC----EEEECCTTT-SCSSCEEEEEEC
T ss_pred CCcE--EEEEcCCCCcEEEEEECCCCCEEEEEcCCC--------EEEEEeccCC----ceeeeeccc-CCCceeeeeeec
Confidence 8762 334444444566688999999988665332 3777787643 122222111 000345567788
Q ss_pred CCC----------cEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 310 SKG----------ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 310 ~DG----------~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
|++ .+++.... ++.-+ .+|........+......+....|+ |+++.| ++...+|
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~-d~~i~--iwd~~~~~~~~~~~h~~~v~~~~~s------------~~g~~l-~sgs~dg 235 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGW-DGRLK--VWNTNFQIRYTFKAHESNVNHLSIS------------PNGKYI-ATGGKDK 235 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEET-TSEEE--EEETTTEEEEEEECCSSCEEEEEEC------------TTSSEE-EEEETTC
T ss_pred cccccccccCCCCCEEEEEcC-CCEEE--EEcCCCceeEEEcCccccceEEEEC------------CCCCEE-EEEcCCC
Confidence 876 44444443 45444 4554332222332222223323333 266654 4455566
Q ss_pred eEEEEEEeCC-CCc-eeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 380 RSYLGILDDF-GHS-LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 380 ~~~L~~~d~~-~~~-~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.-+|| |+. .+. ...+.. ...+..+ ++++. ++..+.+ ..+..+++.+++
T Consensus 236 ~v~iw--d~~~~~~~~~~~~~-~~~v~~v~~sp~~~-~la~~~d----~~v~iw~~~~~~ 287 (343)
T 2xzm_R 236 KLLIW--DILNLTYPQREFDA-GSTINQIAFNPKLQ-WVAVGTD----QGVKIFNLMTQS 287 (343)
T ss_dssp EEEEE--ESSCCSSCSEEEEC-SSCEEEEEECSSSC-EEEEEES----SCEEEEESSSCC
T ss_pred eEEEE--ECCCCcccceeecC-CCcEEEEEECCCCC-EEEEECC----CCEEEEEeCCCC
Confidence 65555 552 222 222222 2234444 55554 3333332 246777776654
No 398
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.32 E-value=0.00011 Score=88.38 Aligned_cols=246 Identities=12% Similarity=0.019 Sum_probs=138.4
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ ..+++...++.|.++|+.++ .....+... ........|+|||++|+....+ +.|.+
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-~~~~~~~~h----~~~v~~~~~s~~~~~l~s~~~d---------~~v~v 683 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETG-EKLLDIKAH----EDEVLCCAFSSDDSYIATCSAD---------KKVKI 683 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCC-CEEEEeccC----CCCEEEEEEecCCCEEEEEeCC---------CeEEE
Confidence 445666666 45566667888999999876 233444432 3456678899999988876543 56899
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
+|+.+++. +..+......+....|+|+++..+++.... ...|.++|+.++. ....+.+.. ..+..
T Consensus 684 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~---~~~~~~~h~----~~v~~ 748 (1249)
T 3sfz_A 684 WDSATGKL--VHTYDEHSEQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKE---CRNTMFGHT----NSVNH 748 (1249)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSCCEEEEEET------TSCEEEEETTSSS---EEEEECCCS----SCEEE
T ss_pred EECCCCce--EEEEcCCCCcEEEEEEecCCCceEEEEEeC------CCeEEEEECCCcc---hhheecCCC----CCEEE
Confidence 99988862 334444444566678999755433333222 2238888988763 333444444 46678
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEee-ccccccc--c--cccccCcceeEEeecCCCCEEEEEEEECCe
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSR--P--LWVFGINSYEIIQSHGEKNLIACSYRQNGR 380 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~--~--~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~ 380 (623)
..|+|||++++.... +|. |..+|..+++...... ....... + ..........+ +++++.++... ++
T Consensus 749 ~~~sp~~~~l~s~s~-dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~dg~~l~~~~--~~- 819 (1249)
T 3sfz_A 749 CRFSPDDELLASCSA-DGT--LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW---SADGDKIIVAA--KN- 819 (1249)
T ss_dssp EEECSSTTEEEEEES-SSE--EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB---CTTSSEEEEEE--TT-
T ss_pred EEEecCCCEEEEEEC-CCe--EEEEeCCCCcccceecccccccccCCccccccceEEEEEE---CCCCCEEEEEc--CC-
Confidence 899999995554444 354 5555666665332221 1000000 0 00000111222 23777777655 33
Q ss_pred EEEEEEeCCCCcee-ecc-cCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 381 SYLGILDDFGHSLS-LLD-IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 381 ~~L~~~d~~~~~~~-~lt-~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
.+.++|..++... .+. .....+..+ ++++..++.... ...+..+++.+++
T Consensus 820 -~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 820 -KVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS----QYCVELWNIDSRL 873 (1249)
T ss_dssp -EEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS----SSCEEEEETTTTE
T ss_pred -cEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCc
Confidence 5666787766543 232 222334333 666665544332 2356777777654
No 399
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.31 E-value=7.9e-05 Score=77.53 Aligned_cols=226 Identities=11% Similarity=-0.012 Sum_probs=115.5
Q ss_pred eCCEEEEEeCCC------CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEe-c------cCCCCC--
Q 006979 153 FGDTVIFSNYKD------QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVRE-D------RRQDAL-- 217 (623)
Q Consensus 153 s~d~l~f~~~~~------~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~-~------~~~~~~-- 217 (623)
.++.++++...+ +.|.++|.++. .....+..+. .+...-.++.|+|+++.+ ++++ - .+-.+.
T Consensus 146 ~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~-~v~~~~~~~~-~~~~~~Yd~~~~p~~~~m-vsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 146 GPDAIYISALGNEEGEGPGGILMLDHYSF-EPLGKWEIDR-GDQYLAYDFWWNLPNEVL-VSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp CSSCEEEEEEEETTSCSCCEEEEECTTTC-CEEEECCSBC-TTCCCCCCEEEETTTTEE-EECBCCCHHHHTTCCCTTTH
T ss_pred CCCeEEEEcCCCcCCCCCCeEEEEECCCC-eEEEEEccCC-CCccccceEEECCCCCEE-EEccCcCccccccccchhhh
Confidence 455555554333 57999999876 2234444321 122333478899999954 4443 1 000000
Q ss_pred --CceeEEEEEEcCCCCcccceecccCCCcccce-----eeCCCCCEEEEEEe-cCCCCCCCceEEEEEEecCCCceeee
Q 006979 218 --NSTTEIVAIALNGQNIQEPKVLVSGSDFYAFP-----RMDPRGERMAWIEW-HHPNMPWDKAELWVGYISENGDVYKR 289 (623)
Q Consensus 218 --~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p-----~wSPDG~~la~~~~-~~~~~p~~~~~L~v~d~~~~~~~~~~ 289 (623)
....+|.++|+++++. ...+.-+.. -..| .++|||++++.+.. +..+ ..++|+++..++ +.....
T Consensus 223 ~~~~~d~V~v~D~~~~k~--~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~---Lss~V~v~~~d~-g~~~~~ 295 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRKR--IHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKD---LSSSIWLWFYED-GKWNAE 295 (462)
T ss_dssp HHHSCCEEEEEETTTTEE--EEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTT---CCEEEEEEEEET-TEEEEE
T ss_pred hhccCCEEEEEECCCCcE--eeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccC---CCceEEEEEecC-CceeEE
Confidence 1247899999998752 233433211 1223 36999998766543 1111 135677777665 332222
Q ss_pred EEE--cCCCCCc------------cccCcCceeCCCCcEEEEEeCCCCeeeEEEEecC-CCeEEEEe--ecccccccccc
Q 006979 290 VCV--AGFDPTI------------VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEVLAIY--SLDAEFSRPLW 352 (623)
Q Consensus 290 ~~~--~~~~~~~------------~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~-~~~~~~l~--~~~~~~~~~~w 352 (623)
.++ ....-.+ ......+..|+||+.+|++++.. ..|..+|.. .++.+.+. +....+..+.+
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~--d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~ 373 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI--GEVRQYDISNPFKPVLTGKVKLGGIFHRADH 373 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT--TEEEEEECSSTTSCEEEEEEECBTTTTCBCC
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC--CEEEEEEecCCCCcEEEEEEEeCCeeccccc
Confidence 221 1100000 02456788999999888898844 456666653 33333222 21111111111
Q ss_pred ------cccCcceeEEeecCCCCEEEEEEE-----------ECCeEEEEEE--eCCCCcee
Q 006979 353 ------VFGINSYEIIQSHGEKNLIACSYR-----------QNGRSYLGIL--DDFGHSLS 394 (623)
Q Consensus 353 ------~~~~~~~~~l~~s~~~~~l~~~~~-----------~~g~~~L~~~--d~~~~~~~ 394 (623)
..+.+.+.+. +||++||++.. +.....++++ |.++| ++
T Consensus 374 ~~G~~~~ggPr~~~lS---pDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~ 430 (462)
T 2ece_A 374 PAGHKLTGAPQMLEIS---RDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE 430 (462)
T ss_dssp TTSCCCCSCCCCEEEC---TTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE
T ss_pred cccccCCCCCCEEEEc---CCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce
Confidence 0122445554 48998888872 2233456644 66666 54
No 400
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.31 E-value=5.2e-05 Score=83.94 Aligned_cols=195 Identities=13% Similarity=0.064 Sum_probs=122.0
Q ss_pred EEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 150 ~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
|....+.||+++...+.|+++++++. ..+.+.... .....+.++++.++.|+++.... ..|.+++++
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~--~~~~v~~~g---~~~P~GlAvD~~~~~LY~tD~~~--------~~I~v~~~d 110 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGS--ALEHVVEFG---LDYPEGMAVDWLGKNLYWADTGT--------NRIEVSKLD 110 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSS---CSCCCEEEEETTTTEEEEEETTT--------TEEEEEETT
T ss_pred EECCCCEEEEEECCCCeEEEEECCCC--CcEEEEeCC---CCCcceEEEEeCCCEEEEEECCC--------CEEEEEecC
Confidence 33345689999988889999999865 444433220 12234577888888887764322 679999998
Q ss_pred CCCcccceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 230 GQNIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 230 ~g~~~~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
++. .+.|. .+.......+..|...+|+|..|.. ..+|+++++++.. ...+..+ - ..+.....
T Consensus 111 G~~---~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~------~~~I~r~~~dG~~---~~~l~~~-~----~~P~Glal 173 (628)
T 4a0p_A 111 GQH---RQVLVWKDLDSPRALALDPAEGFMYWTEWGG------KPKIDRAAMDGSE---RTTLVPN-V----GRANGLTI 173 (628)
T ss_dssp STT---CEEEECSSCCCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCS---CEEEECS-C----SSEEEEEE
T ss_pred CCc---EEEEEeCCCCCcccEEEccCCCeEEEeCCCC------CCEEEEEeCCCCc---eEEEECC-C----CCcceEEE
Confidence 875 45554 3333344567999888899987642 4579999998763 2333332 2 34567788
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeC
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~ 388 (623)
+++++.+|.++. +...|+++|+++...+.+... ...| ..+.+ +++.+||+.. ....|+++|.
T Consensus 174 D~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~---l~~P------~glav-----~~~~ly~tD~--~~~~I~~~dk 235 (628)
T 4a0p_A 174 DYAKRRLYWTDL--DTNLIESSNMLGLNREVIADD---LPHP------FGLTQ-----YQDYIYWTDW--SRRSIERANK 235 (628)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTSCSCEEEEEC---CSCE------EEEEE-----ETTEEEEEET--TTTEEEEEET
T ss_pred ccccCEEEEEEC--CCCEEEEEcCCCCceEEeecc---CCCc------eEEEE-----ECCEEEEecC--CCCEEEEEEC
Confidence 888774445565 445799999877655433211 1111 12333 4468888763 3446788886
Q ss_pred CCCc
Q 006979 389 FGHS 392 (623)
Q Consensus 389 ~~~~ 392 (623)
.+|+
T Consensus 236 ~tg~ 239 (628)
T 4a0p_A 236 TSGQ 239 (628)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 5543
No 401
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.31 E-value=7.9e-05 Score=72.56 Aligned_cols=198 Identities=12% Similarity=0.037 Sum_probs=106.2
Q ss_pred eEEEeCC-EEEE-EeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 149 AFRIFGD-TVIF-SNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 149 ~~~~s~d-~l~f-~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
..+++++ .+++ .+..++.|++++..++ ....+... .........++|+|+ |++... . ..|+++
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~--~~~~~~~~---~~~~p~~i~~~~~g~-l~v~~~-~--------~~i~~~ 92 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGST--GTTVLPFN---GLYQPQGLAVDGAGT-VYVTDF-N--------NRVVTL 92 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-------EECCCC---SCCSCCCEEECTTCC-EEEEET-T--------TEEEEE
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCc--ccceEeeC---CcCCcceeEECCCCC-EEEEcC-C--------CEEEEE
Confidence 3445444 6676 5456678999988654 33333221 012345678999998 444332 1 579999
Q ss_pred EcCCCCcccceeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 227 ALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 227 dl~~g~~~~~~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
|.+++. ...+.. +........++|||+ |++.... ...|++++..+. ......... . ..+..
T Consensus 93 d~~~~~---~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~-------~~~i~~~~~~~~----~~~~~~~~~-~--~~p~~ 154 (270)
T 1rwi_B 93 AAGSNN---QTVLPFDGLNYPEGLAVDTQGA-VYVADRG-------NNRVVKLAAGSK----TQTVLPFTG-L--NDPDG 154 (270)
T ss_dssp CTTCSC---CEECCCCSCSSEEEEEECTTCC-EEEEEGG-------GTEEEEECTTCC----SCEECCCCS-C--CSCCC
T ss_pred eCCCce---EeeeecCCcCCCcceEECCCCC-EEEEECC-------CCEEEEEECCCc----eeEeecccc-C--CCcee
Confidence 998765 444432 223345567999997 6555422 335777754332 111111111 0 24567
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~ 385 (623)
..+++||++|+ ++. +...|+++|++++........ .... ...+.+. +++ .+|++.. +...|++
T Consensus 155 i~~~~~g~l~v-~~~--~~~~i~~~~~~~~~~~~~~~~--~~~~------p~~i~~d---~~g-~l~v~~~--~~~~v~~ 217 (270)
T 1rwi_B 155 VAVDNSGNVYV-TDT--DNNRVVKLEAESNNQVVLPFT--DITA------PWGIAVD---EAG-TVYVTEH--NTNQVVK 217 (270)
T ss_dssp EEECTTCCEEE-EEG--GGTEEEEECTTTCCEEECCCS--SCCS------EEEEEEC---TTC-CEEEEET--TTSCEEE
T ss_pred EEEeCCCCEEE-EEC--CCCEEEEEecCCCceEeeccc--CCCC------ceEEEEC---CCC-CEEEEEC--CCCcEEE
Confidence 88999998554 443 334788999877654433211 1111 1223332 143 6666653 2345888
Q ss_pred EeCCCCceeec
Q 006979 386 LDDFGHSLSLL 396 (623)
Q Consensus 386 ~d~~~~~~~~l 396 (623)
++.+++....+
T Consensus 218 ~~~~~~~~~~~ 228 (270)
T 1rwi_B 218 LLAGSTTSTVL 228 (270)
T ss_dssp ECTTCSCCEEC
T ss_pred EcCCCCcceee
Confidence 88877655443
No 402
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.30 E-value=4.9e-05 Score=75.87 Aligned_cols=242 Identities=9% Similarity=0.008 Sum_probs=125.1
Q ss_pred eEEEeCC-EEEEE-------eCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCCC-CCEEEEEEeccCCCCCC
Q 006979 149 AFRIFGD-TVIFS-------NYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPR-FNRYVTVREDRRQDALN 218 (623)
Q Consensus 149 ~~~~s~d-~l~f~-------~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sPd-G~~l~~v~~~~~~~~~~ 218 (623)
..+++++ .+++. +..++.|+++++.++ ..+.+... ............++|+ |+ |++....
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~------- 91 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG--KKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMR------- 91 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECTTTC--CEEEEECCEETTEECCEEEEEECSSSSE-EEEEETT-------
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC--cEEEEEecccCCCCCCCceEEEecCCCc-EEEEECC-------
Confidence 3444443 67776 445677999998776 55544321 0000123446779999 65 4443321
Q ss_pred ceeEEEEEEcCCCCcccceec-ccCC-----CcccceeeCCCCCEEEEEEecCC--------CCCCCceEEEEEEecCCC
Q 006979 219 STTEIVAIALNGQNIQEPKVL-VSGS-----DFYAFPRMDPRGERMAWIEWHHP--------NMPWDKAELWVGYISENG 284 (623)
Q Consensus 219 ~~~~L~~idl~~g~~~~~~~l-~~~~-----~~~~~p~wSPDG~~la~~~~~~~--------~~p~~~~~L~v~d~~~~~ 284 (623)
..|+++|.+ ++ .+.+ .... .......++|||+ |++...... ........|++++.+ +
T Consensus 92 --~~l~~~d~~-g~---~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g- 162 (314)
T 1pjx_A 92 --LGLLVVQTD-GT---FEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G- 162 (314)
T ss_dssp --TEEEEEETT-SC---EEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S-
T ss_pred --CCEEEEeCC-CC---EEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-C-
Confidence 369999998 66 4444 3211 1244567999997 555543210 000012568888765 3
Q ss_pred ceeeeEEEcCCCCCccccCcCceeC----CCCcEEEEEeCCCCeeeEEEEecC-CCeEEE---Eeeccccc-cccccccc
Q 006979 285 DVYKRVCVAGFDPTIVESPTEPKWS----SKGELFFVTDRKNGFWNLHKWIES-NNEVLA---IYSLDAEF-SRPLWVFG 355 (623)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~ws----~DG~l~~~~~~~~g~~~L~~~d~~-~~~~~~---l~~~~~~~-~~~~w~~~ 355 (623)
. ........ .......|+ +||+.+|+++. +...|+++|++ +++... +....... ..
T Consensus 163 ~--~~~~~~~~-----~~~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~------ 227 (314)
T 1pjx_A 163 Q--MIQVDTAF-----QFPNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG------ 227 (314)
T ss_dssp C--EEEEEEEE-----SSEEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCE------
T ss_pred C--EEEeccCC-----CCcceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCC------
Confidence 2 22222211 223567899 99985555554 23467777765 444221 11110000 11
Q ss_pred CcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCc-eeecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 356 INSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 356 ~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~-~~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
...+.+. .++.++++...+ ..|+++|+++++ ...+..+...+..+ +++++.+++.... ...|++++++
T Consensus 228 p~~i~~d----~~G~l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~ 298 (314)
T 1pjx_A 228 ADGMDFD----EDNNLLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQ 298 (314)
T ss_dssp EEEEEEB----TTCCEEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECS
T ss_pred CCceEEC----CCCCEEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCC
Confidence 1123332 234566654333 368889988444 44454443334444 4566666655432 2478888876
Q ss_pred C
Q 006979 433 D 433 (623)
Q Consensus 433 ~ 433 (623)
.
T Consensus 299 ~ 299 (314)
T 1pjx_A 299 R 299 (314)
T ss_dssp S
T ss_pred C
Confidence 4
No 403
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.30 E-value=6.7e-05 Score=73.10 Aligned_cols=199 Identities=17% Similarity=0.164 Sum_probs=106.8
Q ss_pred ccCceEEcCCCcEEE-EeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCcE
Q 006979 90 RLGGTAVDGHGRLIW-LESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQRL 167 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~-l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~l 167 (623)
.+..+.+++++.+|+ .+.. .+ .|++++..+ ......+.. . .......+++++ .+++... ++.|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~---~~--~i~~~~~~~--~~~~~~~~~-~------~~~p~~i~~~~~g~l~v~~~-~~~i 89 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGM---YG--RVVKLATGS--TGTTVLPFN-G------LYQPQGLAVDGAGTVYVTDF-NNRV 89 (270)
T ss_dssp CEEEEEECTTCCEEEEECSS---SC--EEEEECC-------EECCCC-S------CCSCCCEEECTTCCEEEEET-TTEE
T ss_pred CccceEECCCCCEEEEccCC---CC--cEEEecCCC--cccceEeeC-C------cCCcceeEECCCCCEEEEcC-CCEE
Confidence 556778887556776 4322 23 366666542 222222211 0 011234555544 6777765 7789
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc-cCCCcc
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV-SGSDFY 246 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~-~~~~~~ 246 (623)
++++.+++ ....+... ......+..++|+|+ +++..... ..|++++..+.. ..... .+....
T Consensus 90 ~~~d~~~~--~~~~~~~~---~~~~p~~i~~~~~g~-l~v~~~~~--------~~i~~~~~~~~~---~~~~~~~~~~~p 152 (270)
T 1rwi_B 90 VTLAAGSN--NQTVLPFD---GLNYPEGLAVDTQGA-VYVADRGN--------NRVVKLAAGSKT---QTVLPFTGLNDP 152 (270)
T ss_dssp EEECTTCS--CCEECCCC---SCSSEEEEEECTTCC-EEEEEGGG--------TEEEEECTTCCS---CEECCCCSCCSC
T ss_pred EEEeCCCc--eEeeeecC---CcCCCcceEECCCCC-EEEEECCC--------CEEEEEECCCce---eEeeccccCCCc
Confidence 99998765 44444322 012345678999997 44333221 568888765543 22222 222334
Q ss_pred cceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeee
Q 006979 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 326 (623)
Q Consensus 247 ~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~ 326 (623)
....++|||+ |++.... ...|++++.++.. ........ . ..+..+.+++||.+|+ ++. +...
T Consensus 153 ~~i~~~~~g~-l~v~~~~-------~~~i~~~~~~~~~----~~~~~~~~-~--~~p~~i~~d~~g~l~v-~~~--~~~~ 214 (270)
T 1rwi_B 153 DGVAVDNSGN-VYVTDTD-------NNRVVKLEAESNN----QVVLPFTD-I--TAPWGIAVDEAGTVYV-TEH--NTNQ 214 (270)
T ss_dssp CCEEECTTCC-EEEEEGG-------GTEEEEECTTTCC----EEECCCSS-C--CSEEEEEECTTCCEEE-EET--TTSC
T ss_pred eeEEEeCCCC-EEEEECC-------CCEEEEEecCCCc----eEeecccC-C--CCceEEEECCCCCEEE-EEC--CCCc
Confidence 5677999997 6555422 3458888876652 11111111 0 2345678899995554 443 3346
Q ss_pred EEEEecCCCeEE
Q 006979 327 LHKWIESNNEVL 338 (623)
Q Consensus 327 L~~~d~~~~~~~ 338 (623)
|+++++++....
T Consensus 215 v~~~~~~~~~~~ 226 (270)
T 1rwi_B 215 VVKLLAGSTTST 226 (270)
T ss_dssp EEEECTTCSCCE
T ss_pred EEEEcCCCCcce
Confidence 888888765433
No 404
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.30 E-value=6.5e-05 Score=75.83 Aligned_cols=242 Identities=12% Similarity=0.097 Sum_probs=127.9
Q ss_pred EEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCC--C--------------CCeeecceeeCC-CCCEEEEEEec
Q 006979 150 FRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYG--E--------------PLVSYADGIFDP-RFNRYVTVRED 211 (623)
Q Consensus 150 ~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~--~--------------~~~~~~d~~~sP-dG~~l~~v~~~ 211 (623)
.+++++ .++|++..+++|++++.+++ ..+.+..... . ...+.....++| +| .|++....
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~~ 100 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNS--GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDCY 100 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTT--CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEETT
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCC--ceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEECC
Confidence 444444 45777777788999988765 3433321000 0 001233466887 55 44443221
Q ss_pred cCCCCCCceeEEEEEEcCCCCcccceecccC---C--CcccceeeCC-CCCEEEEEEecCC-CC---------CCCceEE
Q 006979 212 RRQDALNSTTEIVAIALNGQNIQEPKVLVSG---S--DFYAFPRMDP-RGERMAWIEWHHP-NM---------PWDKAEL 275 (623)
Q Consensus 212 ~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~---~--~~~~~p~wSP-DG~~la~~~~~~~-~~---------p~~~~~L 275 (623)
..|+++|++++. .+.+... . .+.....+.| ||+ |++...... .. .-....|
T Consensus 101 ---------~~i~~~d~~~g~---~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 101 ---------YHLSVVGSEGGH---ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp ---------TEEEEECTTCEE---CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred ---------CCEEEEeCCCCE---EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceE
Confidence 348899988775 4444321 1 2234567999 986 666643210 00 0013679
Q ss_pred EEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCC---eEEEEeecccccccccc
Q 006979 276 WVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN---EVLAIYSLDAEFSRPLW 352 (623)
Q Consensus 276 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~---~~~~l~~~~~~~~~~~w 352 (623)
++++.+++. ...+..+. .....+.|++||+.+|+++. +..+|+++++++. ..+.+... .+|
T Consensus 168 ~~~d~~~~~---~~~~~~~~-----~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~----~gP-- 231 (322)
T 2fp8_A 168 IKYDPSTKE---TTLLLKEL-----HVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKI----PNP-- 231 (322)
T ss_dssp EEEETTTTE---EEEEEEEE-----SCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEEC----SSE--
T ss_pred EEEeCCCCE---EEEeccCC-----ccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeC----CCC--
Confidence 998876551 22222221 23457899999996666665 4457889988753 23333211 011
Q ss_pred cccCcceeEEeecCCCCEEEEEEEE--------CCeEEEEEEeCCCCceeecccCCc----ceEeeeecCCEEEEEEecC
Q 006979 353 VFGINSYEIIQSHGEKNLIACSYRQ--------NGRSYLGILDDFGHSLSLLDIPFT----DIDNITLGNDCLFVEGASG 420 (623)
Q Consensus 353 ~~~~~~~~~l~~s~~~~~l~~~~~~--------~g~~~L~~~d~~~~~~~~lt~~~~----~v~~~~~~~~~~~~~~~s~ 420 (623)
+.+.+- ++| .||++... .....|+++|.++..++.+..+.. ....+...++++|+...
T Consensus 232 ----~gi~~d---~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~-- 301 (322)
T 2fp8_A 232 ----GNIKRN---ADG-HFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL-- 301 (322)
T ss_dssp ----EEEEEC---TTS-CEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS--
T ss_pred ----CCeEEC---CCC-CEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec--
Confidence 223332 244 46666544 225679999998666666655432 23333335667766532
Q ss_pred CCCCeEEEEEcCCC
Q 006979 421 VEPSSVAKVTLDDH 434 (623)
Q Consensus 421 ~~~~~ly~~~l~~~ 434 (623)
....|.+++++..
T Consensus 302 -~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 302 -FHGSVGILVYDKK 314 (322)
T ss_dssp -SCSEEEEEEC---
T ss_pred -CCCceEEEecccc
Confidence 2246777776543
No 405
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.29 E-value=5.7e-05 Score=76.84 Aligned_cols=152 Identities=7% Similarity=-0.016 Sum_probs=90.9
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~ 235 (623)
..+++...++.|.++|+.++ ....+... ..........|+|||+.++....+ ..|.++|+.+++.
T Consensus 140 ~~l~s~s~dg~i~~wd~~~~--~~~~~~~~--~~~~~i~~~~~~pdg~~lasg~~d---------g~i~iwd~~~~~~-- 204 (343)
T 3lrv_A 140 EYFIWADNRGTIGFQSYEDD--SQYIVHSA--KSDVEYSSGVLHKDSLLLALYSPD---------GILDVYNLSSPDQ-- 204 (343)
T ss_dssp CEEEEEETTCCEEEEESSSS--CEEEEECC--CSSCCCCEEEECTTSCEEEEECTT---------SCEEEEESSCTTS--
T ss_pred CEEEEEeCCCcEEEEECCCC--cEEEEEec--CCCCceEEEEECCCCCEEEEEcCC---------CEEEEEECCCCCC--
Confidence 45566667888999999876 44332221 112236678899999987765443 4588899988762
Q ss_pred c-eeccc-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCc--CceeCCC
Q 006979 236 P-KVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT--EPKWSSK 311 (623)
Q Consensus 236 ~-~~l~~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ws~D 311 (623)
. ..+.. ....+....|||||++|+... +. .|.+.|+.....+.....+.... ..+. ...|+|+
T Consensus 205 ~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~--------~v~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 205 ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ--------TVVCFDLRKDVGTLAYPTYTIPE----FKTGTVTYDIDDS 271 (343)
T ss_dssp CCEECCCCTTSCEEEEEECTTSSEEEEEE-SS--------BEEEEETTSSTTCBSSCCCBC---------CCEEEEECTT
T ss_pred CccEEeccCCCCEEEEEEeCCCCEEEEEe-CC--------eEEEEEcCCCCcceeeccccccc----ccccceEEEECCC
Confidence 2 34443 344566788999999988765 32 38888988763211111111111 1222 3899999
Q ss_pred CcEEEEEeCCCCeeeEEEEecCCC
Q 006979 312 GELFFVTDRKNGFWNLHKWIESNN 335 (623)
Q Consensus 312 G~l~~~~~~~~g~~~L~~~d~~~~ 335 (623)
|++++.....++.-+||.++....
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCEEEEecCCCCcEEEEEEccccc
Confidence 995444332135566776654333
No 406
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.29 E-value=6.7e-05 Score=77.15 Aligned_cols=256 Identities=4% Similarity=-0.141 Sum_probs=127.4
Q ss_pred CEEEEEeCCCC----cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEecc-CCCCCCceeEEEEEEcC
Q 006979 155 DTVIFSNYKDQ----RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVAIALN 229 (623)
Q Consensus 155 d~l~f~~~~~~----~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~-~~~~~~~~~~L~~idl~ 229 (623)
.++|+.+..++ +++++|++++ .....+.-+ . . ..+.+||||++++...... .....+..+.|.++|+.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~-~v~~~i~vG----~-~-P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~ 104 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCG-VTLGHSLGA----F-L-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV 104 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTT-EEEEEEEEC----T-T-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT
T ss_pred CeEEEECCccCCccceEEEEECCCC-eEEEEEeCC----C-C-CceEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 36677766555 7999999876 233344433 1 1 1488999999887664211 00011123789999999
Q ss_pred CCCcccceecccC--C-----CcccceeeCCCCCEEEEEEecCCCCCCCceEEEE--EEecC------CCc--e---ee-
Q 006979 230 GQNIQEPKVLVSG--S-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWV--GYISE------NGD--V---YK- 288 (623)
Q Consensus 230 ~g~~~~~~~l~~~--~-----~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v--~d~~~------~~~--~---~~- 288 (623)
+++. ...+.-+ . ....+..+||||++|+...... ...|.+ +|..+ ++. + ..
T Consensus 105 T~~v--v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~------~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~ 176 (368)
T 1mda_H 105 TFLP--IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS------SAAAGLSVPGASDDQLTKSASCFHIHPGAAA 176 (368)
T ss_dssp TCCE--EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS------SCEEEEEETTTEEEEEEECSSCCCCEEEETT
T ss_pred CCCE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC------CCeEEEEEEchhhceEEECCCceEEccCCCe
Confidence 9874 3333211 1 2234567999999987765321 122444 44322 000 0 00
Q ss_pred -----------eEEEcCCCCCccccC-----------cCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeeccc
Q 006979 289 -----------RVCVAGFDPTIVESP-----------TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDA 345 (623)
Q Consensus 289 -----------~~~~~~~~~~~~~~~-----------~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~ 345 (623)
..+.....+.|...+ ..|..++++. ++|++. ..++.+|..++..+.+..-..
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-----~~V~viD~~~~~~~v~~~~~~ 251 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-----SSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-----SCCEEEECCSSCCEEECCCCS
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-----CEEEEEECCCCcceEEEEEEe
Confidence 000000000000000 0111133333 444432 246666765543332221100
Q ss_pred c---cccccccccC-cceeEEeecCCCCEEEEEEEEC-C-----eEEEEEEeCCCCce-eecccCCcceEe--eeecCCE
Q 006979 346 E---FSRPLWVFGI-NSYEIIQSHGEKNLIACSYRQN-G-----RSYLGILDDFGHSL-SLLDIPFTDIDN--ITLGNDC 412 (623)
Q Consensus 346 ~---~~~~~w~~~~-~~~~~l~~s~~~~~l~~~~~~~-g-----~~~L~~~d~~~~~~-~~lt~~~~~v~~--~~~~~~~ 412 (623)
. .....|.+.. ..+.+. ++++++|+...+. + ...+.++|++++++ ..|..+.. ... +++++++
T Consensus 252 ~~~~~~~~~~~p~g~~~v~~s---~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~-p~gi~~s~Dg~~ 327 (368)
T 1mda_H 252 NESGRKADNFRSAGFQMVAKL---KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD-SDAIIAAQDGAS 327 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEE---TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE-ECEEEECCSSSC
T ss_pred ccccccccccccCcceeeEEc---CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC-cceEEECCCCCE
Confidence 0 0011222211 113333 4888888876634 4 34555999988765 45554432 222 3778887
Q ss_pred EEEEEecCCCCCeEEEEEcCCCcc
Q 006979 413 LFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 413 ~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+++..... ...|.++|+++++.
T Consensus 328 l~va~~~~--~~~VsVID~~t~kv 349 (368)
T 1mda_H 328 DNYANSAG--TEVLDIYDAASDQD 349 (368)
T ss_dssp EEEEEETT--TTEEEEEESSSCEE
T ss_pred EEEEccCC--CCeEEEEECCCCcE
Confidence 87776511 35799999988763
No 407
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=98.28 E-value=2.9e-06 Score=82.44 Aligned_cols=111 Identities=11% Similarity=0.067 Sum_probs=74.5
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCce--EEEEECCCCCCC--C-ch--hHHH-hh----ccC--Ccc--chHHHHH
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGW--AFVDVNYGGSTG--Y-GR--EFRE-RL----LGR--WGI--VDVNDCC 559 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~--~v~~~d~rGs~~--~-g~--~~~~-~~----~~~--~g~--~~~~D~~ 559 (623)
+-||++||. ......|...++.|+++|| .|+.+|.++.|. + |. ...+ .. ..+ -+. ...+++.
T Consensus 7 ~pvvliHG~--~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 7 TATLFLHGY--GGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp EEEEEECCT--TCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CcEEEECCC--CCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 457779997 4455578889999999997 477777665432 1 11 0000 00 000 011 1356788
Q ss_pred HHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC-----ceeEEEecccCCCH
Q 006979 560 SCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD-----TFKAGASLYGVSIP 610 (623)
Q Consensus 560 ~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~-----~f~a~v~~~g~~d~ 610 (623)
++++++.++-. .+++.++||||||.+++.++ .+++ .++..|.+.+..+-
T Consensus 85 ~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g 139 (249)
T 3fle_A 85 EVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNG 139 (249)
T ss_dssp HHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTC
T ss_pred HHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCC
Confidence 88999987633 46999999999999999888 6653 78999998876543
No 408
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.28 E-value=0.00037 Score=72.50 Aligned_cols=288 Identities=10% Similarity=-0.007 Sum_probs=141.5
Q ss_pred EeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCC--C---CCCe-eecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--G---EPLV-SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 152 ~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~--~---~~~~-~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
...+.+++....+++||++|+++....++....-. + .... +-....++||| .++....+.. .+..+.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~---g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEE---GEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETT---SCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcC---CCCCCeEEE
Confidence 33457888888889999999875311222211100 0 0001 22234689999 3332223321 123478999
Q ss_pred EEcCCCCcccceecccC--C-CcccceeeCCCCCEEEEEEecCCC------CCC-----CceEEEEEEecCCCceeeeEE
Q 006979 226 IALNGQNIQEPKVLVSG--S-DFYAFPRMDPRGERMAWIEWHHPN------MPW-----DKAELWVGYISENGDVYKRVC 291 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~--~-~~~~~p~wSPDG~~la~~~~~~~~------~p~-----~~~~L~v~d~~~~~~~~~~~~ 291 (623)
+|.++.++ +..+..+ . .+-....|+||++.++-..|-.|. ++. ...+|.++|++++.. ...+
T Consensus 169 lD~~T~~v--~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~--~~tI 244 (462)
T 2ece_A 169 LDHYSFEP--LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR--IHSL 244 (462)
T ss_dssp ECTTTCCE--EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE--EEEE
T ss_pred EECCCCeE--EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE--eeEE
Confidence 99998873 3334322 2 333456789999966544432111 111 256799999987521 2223
Q ss_pred EcCCCCCccccCcCc--eeCCCCc-EEEEEe-----CCCCeeeEEEEecCCCeEEEEe---eccccccc--c----cc--
Q 006979 292 VAGFDPTIVESPTEP--KWSSKGE-LFFVTD-----RKNGFWNLHKWIESNNEVLAIY---SLDAEFSR--P----LW-- 352 (623)
Q Consensus 292 ~~~~~~~~~~~~~~~--~ws~DG~-l~~~~~-----~~~g~~~L~~~d~~~~~~~~l~---~~~~~~~~--~----~w-- 352 (623)
..+.. . .....+ .++|||+ .|+... . ++.-.++.+| .++.+.+. .....+.. + .+
T Consensus 245 ~vg~~-g--~~P~~i~f~~~Pdg~~aYV~~e~~~~~L-ss~V~v~~~d--~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 245 TLGEE-N--RMALELRPLHDPTKLMGFINMVVSLKDL-SSSIWLWFYE--DGKWNAEKVIEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp ESCTT-E--EEEEEEEECSSTTCCEEEEEEEEETTTC-CEEEEEEEEE--TTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred ecCCC-C--CccceeEeeECCCCCEEEEEEeeeccCC-CceEEEEEec--CCceeEEEEEeCCCcccccccccccccccc
Confidence 33322 1 122233 4599999 444444 3 3433344444 35433222 11100000 0 00
Q ss_pred -cccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCC-CCcee---ecccC-----------C-----cceEeeeecCC
Q 006979 353 -VFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF-GHSLS---LLDIP-----------F-----TDIDNITLGND 411 (623)
Q Consensus 353 -~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~-~~~~~---~lt~~-----------~-----~~v~~~~~~~~ 411 (623)
......+.+ ++|++.||++....+ .|.++|.. .++.+ ++..+ . ..--.++++++
T Consensus 319 ~~~~pa~I~l---S~DGrfLYVSnrg~d--~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk 393 (462)
T 2ece_A 319 VPPLVTDIDI---SLDDKFLYLSLWGIG--EVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR 393 (462)
T ss_dssp ECCCCCCEEE---CTTSCEEEEEETTTT--EEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS
T ss_pred CCCceeEEEE---CCCCCEEEEEeCCCC--EEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCC
Confidence 011223333 458888887764444 55566653 32222 33332 0 11223488899
Q ss_pred EEEEEEe-------c---CCCCCeEEEE--EcCCCcceeeeeEEEeccCCCCccCCCCCCCcEEEEeecC
Q 006979 412 CLFVEGA-------S---GVEPSSVAKV--TLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTE 469 (623)
Q Consensus 412 ~~~~~~~-------s---~~~~~~ly~~--~l~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 469 (623)
++|+..+ . ......++++ |.++| ++ ++..-.++ +.. ..+.+++|+..
T Consensus 394 ~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~-~~~~f~vd------f~~---~~~h~~r~~gg 452 (462)
T 2ece_A 394 RVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE-IDKEFFVD------FGE---ARSHQVRLSGG 452 (462)
T ss_dssp EEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE-EEEEEEEE------CTT---SEEEEEEETTC
T ss_pred EEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce-eCCCEEee------ccc---CcceeeecCCC
Confidence 8888772 1 2334567766 55566 44 43222221 111 57778888653
No 409
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.25 E-value=2.8e-06 Score=87.58 Aligned_cols=159 Identities=11% Similarity=0.171 Sum_probs=84.6
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCC
Q 006979 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (623)
Q Consensus 192 ~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~ 271 (623)
......|+|||++|+....+ ..|.++|+.++.......+......+...+|+|||++|+....|.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d---------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------ 77 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT---------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------ 77 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS---------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------
T ss_pred cEEEEEECCCCCEEEEecCC---------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------
Confidence 35668899999988765443 346677777662111333443344566788999999998776443
Q ss_pred ceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCe----EEEEee-cccc
Q 006979 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNE----VLAIYS-LDAE 346 (623)
Q Consensus 272 ~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~----~~~l~~-~~~~ 346 (623)
.|.++|+..+........+.+.. ..+....|+|||++++.... ++. |..+|..+++ .+.+.. ....
T Consensus 78 --~v~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-d~~--i~iwd~~~~~~~~~~~~~~~~h~~~ 148 (377)
T 3dwl_C 78 --NAYVYEKRPDGTWKQTLVLLRLN----RAATFVRWSPNEDKFAVGSG-ARV--ISVCYFEQENDWWVSKHLKRPLRST 148 (377)
T ss_dssp --SEEEC------CCCCEEECCCCS----SCEEEEECCTTSSCCEEEES-SSC--EEECCC-----CCCCEEECSSCCSC
T ss_pred --eEEEEEcCCCCceeeeeEecccC----CceEEEEECCCCCEEEEEec-CCe--EEEEEECCcccceeeeEeecccCCC
Confidence 27777887663111233333433 56778899999994444443 344 4455655554 233332 2222
Q ss_pred cccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEe
Q 006979 347 FSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 347 ~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d 387 (623)
+....|. |+++.| ++...++.-++|-++
T Consensus 149 v~~~~~~------------~~~~~l-~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 149 ILSLDWH------------PNNVLL-AAGCADRKAYVLSAY 176 (377)
T ss_dssp EEEEEEC------------TTSSEE-EEEESSSCEEEEEEC
T ss_pred eEEEEEc------------CCCCEE-EEEeCCCEEEEEEEE
Confidence 3223333 265544 445556766666553
No 410
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.25 E-value=0.00013 Score=73.07 Aligned_cols=205 Identities=11% Similarity=0.004 Sum_probs=111.8
Q ss_pred CCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC---CEEEEEeCCC
Q 006979 88 SKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKD 164 (623)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~---d~l~f~~~~~ 164 (623)
...+..+.|+|++.++..-.. +|...+|..... .....+... -..|...+.+..+++ +.++++...+
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~--~~~~~~~~~-----~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSS---DQHIKVFKLDKD--TSNWELSDS-----WRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEET---TSEEEEEEECSS--SCCEEEEEE-----EECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccceeEEEEcCCCCEEEEeeC---CCeEEEEECCCC--CCcceecce-----eccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 345678889984444433322 577778876543 111111100 001222344556654 4566666678
Q ss_pred CcEEEEeCCCCCCC--------ceecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc
Q 006979 165 QRLYKHSIDSKDSS--------PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (623)
Q Consensus 165 ~~l~~~d~~~g~~~--------~~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~ 234 (623)
+.|.++|+.++... ...+... ........|+|+ ++.++....+ ..|.++|+.+++.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~- 146 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDS----KGSLYSVKFAPAHLGLKLACLGND---------GILRLYDALEPSD- 146 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------CEEEEEECSSTTC-
T ss_pred CeEEEEecCCCcccccccCcceeeeeccc----CCceeEEEEcCCCCCcEEEEecCC---------CcEEEecCCChHH-
Confidence 88999998765100 1222221 334667889999 9888876554 5688889877652
Q ss_pred cceecc-------------cCCCcccceeeCCC---CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCC
Q 006979 235 EPKVLV-------------SGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 298 (623)
Q Consensus 235 ~~~~l~-------------~~~~~~~~p~wSPD---G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~ 298 (623)
...+. ..........|+|+ ++.|+....+ ..+...+...+ .......+.+..
T Consensus 147 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~h~-- 214 (351)
T 3f3f_A 147 -LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE--------QAIIYQRGKDG-KLHVAAKLPGHK-- 214 (351)
T ss_dssp -TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT--------EEEEEEECTTS-CEEEEEECCCCC--
T ss_pred -hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC--------CcEEEEccCCC-ceeeeeecCCCC--
Confidence 11111 11123445679998 8877766522 22433333332 211223333333
Q ss_pred ccccCcCceeCCCC----cEEEEEeCCCCeeeEEEEe
Q 006979 299 IVESPTEPKWSSKG----ELFFVTDRKNGFWNLHKWI 331 (623)
Q Consensus 299 ~~~~~~~~~ws~DG----~l~~~~~~~~g~~~L~~~d 331 (623)
..+....|+|+| ++++.... +|.-.+|.+.
T Consensus 215 --~~i~~~~~~p~~~~~~~~l~s~~~-dg~i~iwd~~ 248 (351)
T 3f3f_A 215 --SLIRSISWAPSIGRWYQLIATGCK-DGRIRIFKIT 248 (351)
T ss_dssp --SCEEEEEECCCSSCSSEEEEEEET-TSCEEEEEEE
T ss_pred --cceeEEEECCCCCCcceEEEEEcC-CCeEEEEeCC
Confidence 466788999998 65555554 5665665443
No 411
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.24 E-value=0.00026 Score=70.29 Aligned_cols=226 Identities=11% Similarity=0.025 Sum_probs=117.1
Q ss_pred eEEEeCCEEEEEeCCCCcEEEEeCCCCCCCc-eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 149 ~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~-~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
..+|+++.++.+. .++.|+++|+.++ +. +.+... ..........|+|+|++++....+ ..+.+.|
T Consensus 30 ~l~WS~~~~lAvg-~D~tV~iWd~~tg--~~~~~~~~~--~~~~~V~~v~~~~~~~~l~sgs~D---------g~v~iw~ 95 (318)
T 4ggc_A 30 LVDWSSGNVLAVA-LDNSVYLWSASSG--DILQLLQME--QPGEYISSVAWIKEGNYLAVGTSS---------AEVQLWD 95 (318)
T ss_dssp CEEECTTSEEEEE-ETTEEEEEETTTC--CEEEEEECC--STTCCEEEEEECTTSSEEEEEETT---------SEEEEEE
T ss_pred EEEECCCCEEEEE-eCCEEEEEECCCC--CEEEEEEec--CCCCeEEEEEECCCCCEEEEEECC---------CcEEEee
Confidence 4566766544444 4778999999987 43 333321 113346678899999988776554 3455555
Q ss_pred cCCCCcccceecc-----------------------------------------cCCCcccceeeCCCCCEEEEEEecCC
Q 006979 228 LNGQNIQEPKVLV-----------------------------------------SGSDFYAFPRMDPRGERMAWIEWHHP 266 (623)
Q Consensus 228 l~~g~~~~~~~l~-----------------------------------------~~~~~~~~p~wSPDG~~la~~~~~~~ 266 (623)
+.+++. ++.+. ..........|+++|+.|+....|.
T Consensus 96 ~~~~~~--~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~- 172 (318)
T 4ggc_A 96 VQQQKR--LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN- 172 (318)
T ss_dssp TTTTEE--EEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred cCCcee--EEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-
Confidence 555431 11111 1111223345777877766554332
Q ss_pred CCCCCceEEEEEEecCCCce-eeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecc
Q 006979 267 NMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLD 344 (623)
Q Consensus 267 ~~p~~~~~L~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~ 344 (623)
.|.+.|+..+... .......... ..+....|++++. ++..... .....|..+|.............
T Consensus 173 -------~i~iwd~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~~~~~~~~~ 240 (318)
T 4ggc_A 173 -------LVNVWPSAPGEGGWVPLQTFTQHQ----GAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAH 240 (318)
T ss_dssp -------CEEEEESSCBTTBSCCSEEECCCC----SCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCCEEEEEECS
T ss_pred -------ceeEEECCCCcccccceeeecccC----CceEEEEecCCCCcEEEEEec-CCCCEEEEEecccccccccccce
Confidence 2667777654221 1112222222 3456678888877 6554433 23334555666666544433332
Q ss_pred cccccccccccCcceeEEeecCCCCEEEEEEE-ECCeEEEEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEe
Q 006979 345 AEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSYLGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGA 418 (623)
Q Consensus 345 ~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~-~~g~~~L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~ 418 (623)
..+....|. ++++.++..+. .++ .|+++|..+++. ..+......+..+ ++++..+ ++++
T Consensus 241 ~~v~~~~~~------------~~~~~~~~~sg~~d~--~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l-~S~s 303 (318)
T 4ggc_A 241 SQVCSILWS------------PHYKELISGHGFAQN--QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV-ASAA 303 (318)
T ss_dssp SCEEEEEEE------------TTTTEEEEEECTTTC--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE-EEEE
T ss_pred eeeeeeeec------------ccccceEEEEEcCCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-EEEe
Confidence 222222222 26666665542 334 456668776654 4455444456655 5555543 3443
No 412
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.24 E-value=0.00012 Score=72.21 Aligned_cols=210 Identities=12% Similarity=0.045 Sum_probs=109.4
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEe--CCEEEEEeCC-CCc
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNYK-DQR 166 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s--~d~l~f~~~~-~~~ 166 (623)
.+..+.+++++.+|+.+.. +++ |.+++.. ++....++..-.... +......++++ ++.+++.... ++.
T Consensus 31 ~p~~v~~~~~g~l~v~~~~---~~~--i~~~d~~--g~~~~~~~~~~~~~~--~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTN---NHR--IQIFDKE--GRFKFQFGECGKRDS--QLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp CEEEEEECTTCCEEEEEGG---GTE--EEEECTT--SCEEEEECCBSSSTT--CBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CCceEEECCCCCEEEEECC---CCE--EEEECCC--CcEEEEecccCCCcc--cccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 3456777775567776543 233 5555544 233222221100000 00012234553 3477777643 567
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc--CCC
Q 006979 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS--GSD 244 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~--~~~ 244 (623)
|++++.++. ..+.+... ......+..++|+|+ +++..... ..|+++|.++.. ...+.. ...
T Consensus 102 i~~~d~~g~--~~~~~~~~---~~~~~~~i~~~~~g~-l~v~~~~~--------~~i~~~~~~g~~---~~~~~~~~~~~ 164 (286)
T 1q7f_A 102 IQIYNQYGQ--FVRKFGAT---ILQHPRGVTVDNKGR-IIVVECKV--------MRVIIFDQNGNV---LHKFGCSKHLE 164 (286)
T ss_dssp EEEECTTSC--EEEEECTT---TCSCEEEEEECTTSC-EEEEETTT--------TEEEEECTTSCE---EEEEECTTTCS
T ss_pred EEEECCCCc--EEEEecCc---cCCCceEEEEeCCCC-EEEEECCC--------CEEEEEcCCCCE---EEEeCCCCccC
Confidence 999995432 33334321 112345678999997 43332211 569999976543 333322 222
Q ss_pred cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCe
Q 006979 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 324 (623)
Q Consensus 245 ~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~ 324 (623)
......++|||+ |++.... ...|++++.++. ....+...... ..+..+.+++||++++. +. .+.
T Consensus 165 ~p~~i~~~~~g~-l~v~~~~-------~~~i~~~~~~g~----~~~~~~~~g~~--~~p~~i~~d~~G~l~v~-~~-~~~ 228 (286)
T 1q7f_A 165 FPNGVVVNDKQE-IFISDNR-------AHCVKVFNYEGQ----YLRQIGGEGIT--NYPIGVGINSNGEILIA-DN-HNN 228 (286)
T ss_dssp SEEEEEECSSSE-EEEEEGG-------GTEEEEEETTCC----EEEEESCTTTS--CSEEEEEECTTCCEEEE-EC-SSS
T ss_pred CcEEEEECCCCC-EEEEECC-------CCEEEEEcCCCC----EEEEEccCCcc--CCCcEEEECCCCCEEEE-eC-CCC
Confidence 345567999997 6555322 345888887543 22233221100 24457789999976554 43 122
Q ss_pred eeEEEEecCCCeEEEEe
Q 006979 325 WNLHKWIESNNEVLAIY 341 (623)
Q Consensus 325 ~~L~~~d~~~~~~~~l~ 341 (623)
..|.++|+++...+.+.
T Consensus 229 ~~i~~~~~~g~~~~~~~ 245 (286)
T 1q7f_A 229 FNLTIFTQDGQLISALE 245 (286)
T ss_dssp CEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEc
Confidence 37888887665555443
No 413
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.24 E-value=2.6e-06 Score=73.86 Aligned_cols=81 Identities=7% Similarity=-0.111 Sum_probs=51.3
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.||++| + ... .|... ++ ++|.|+.+|+||.|...... .. .++..+.+..+++. .+.++
T Consensus 23 ~~vv~~H-~--~~~--~~~~~---l~-~~~~v~~~d~~G~G~s~~~~-----~~-----~~~~~~~~~~~~~~--~~~~~ 81 (131)
T 2dst_A 23 PPVLLVA-E--EAS--RWPEA---LP-EGYAFYLLDLPGYGRTEGPR-----MA-----PEELAHFVAGFAVM--MNLGA 81 (131)
T ss_dssp SEEEEES-S--SGG--GCCSC---CC-TTSEEEEECCTTSTTCCCCC-----CC-----HHHHHHHHHHHHHH--TTCCS
T ss_pred CeEEEEc-C--CHH--HHHHH---Hh-CCcEEEEECCCCCCCCCCCC-----CC-----HHHHHHHHHHHHHH--cCCCc
Confidence 6789999 3 111 22222 44 45999999999966542211 00 44444444443332 23469
Q ss_pred eEEEEcChHHHHHHHHh-cCCCc
Q 006979 576 LCITGGSAGGYTTLAAL-AFRDT 597 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~~~~ 597 (623)
+.++|||+||.+++.++ .+|.+
T Consensus 82 ~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 82 PWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp CEEEECGGGGGGHHHHHHTTCCE
T ss_pred cEEEEEChHHHHHHHHHhcCCcE
Confidence 99999999999999999 77853
No 414
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.22 E-value=4.3e-05 Score=77.67 Aligned_cols=151 Identities=11% Similarity=0.068 Sum_probs=91.5
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCC-CCCCCeeecceeeCCC----CCEEEEEEeccCCCCCCceeEEEEEEcCC
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPD-YGEPLVSYADGIFDPR----FNRYVTVREDRRQDALNSTTEIVAIALNG 230 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~-~~~~~~~~~d~~~sPd----G~~l~~v~~~~~~~~~~~~~~L~~idl~~ 230 (623)
..++....++.|.++++.++ ...+.+... ............|+|+ |+.|+....+ ..|.++|+.+
T Consensus 35 ~~~~~~~~~~~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~ 104 (366)
T 3k26_A 35 PLVFATVGSNRVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR---------GIIRIINPIT 104 (366)
T ss_dssp CEEEEEEETTEEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT---------CEEEEECTTT
T ss_pred ceEEEECCCCEEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC---------CEEEEEEchh
Confidence 34444445567888988755 233333321 0001234667889999 5566554443 5789999988
Q ss_pred CCcccceecccCCCcccceeeCC-CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE---cCCCCCccccCcCc
Q 006979 231 QNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV---AGFDPTIVESPTEP 306 (623)
Q Consensus 231 g~~~~~~~l~~~~~~~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 306 (623)
++. ...+......+....|+| |++.|+....+. .|.++|+..+. ....+ .+.. ..+...
T Consensus 105 ~~~--~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~---~~~~~~~~~~~~----~~v~~~ 167 (366)
T 3k26_A 105 MQC--IKHYVGHGNAINELKFHPRDPNLLLSVSKDH--------ALRLWNIQTDT---LVAIFGGVEGHR----DEVLSA 167 (366)
T ss_dssp CCE--EEEEESCCSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTTTE---EEEEECSTTSCS----SCEEEE
T ss_pred ceE--eeeecCCCCcEEEEEECCCCCCEEEEEeCCC--------eEEEEEeecCe---EEEEeccccccc----CceeEE
Confidence 762 334443445566788999 899887665332 38888988762 33333 2333 567789
Q ss_pred eeCCCCcEEEEEeCCCCeeeEEEEecCCCe
Q 006979 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNE 336 (623)
Q Consensus 307 ~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~ 336 (623)
.|+|||++++.... ++. |..+|+.+++
T Consensus 168 ~~~~~~~~l~~~~~-dg~--i~i~d~~~~~ 194 (366)
T 3k26_A 168 DYDLLGEKIMSCGM-DHS--LKLWRINSKR 194 (366)
T ss_dssp EECTTSSEEEEEET-TSC--EEEEESCSHH
T ss_pred EECCCCCEEEEecC-CCC--EEEEECCCCc
Confidence 99999985555544 354 5555665543
No 415
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.22 E-value=5.9e-05 Score=82.41 Aligned_cols=235 Identities=10% Similarity=-0.045 Sum_probs=128.4
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC--CCCc
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN--GQNI 233 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~--~g~~ 233 (623)
.++++...++.|+++|++++ .....+..+ .....+.+||||++++...++ ..|.++|+. +++.
T Consensus 168 ~~~V~~~~~~~V~viD~~t~-~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~d---------g~V~viD~~~~t~~~ 232 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTY-EIKTVLDTG-----YAVHISRLSASGRYLFVIGRD---------GKVNMIDLWMKEPTT 232 (567)
T ss_dssp EEEEEETTTTEEEEEETTTC-CEEEEEECS-----SCEEEEEECTTSCEEEEEETT---------SEEEEEETTSSSCCE
T ss_pred eEEEEeCCCCeEEEEECCCC-eEEEEEeCC-----CCccceEECCCCCEEEEEcCC---------CeEEEEECCCCCCcE
Confidence 56677777888999999886 223344432 122357899999987765421 569999995 5542
Q ss_pred ccceecccCCCcccceeeC----CCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCC---CCC-c--cccC
Q 006979 234 QEPKVLVSGSDFYAFPRMD----PRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF---DPT-I--VESP 303 (623)
Q Consensus 234 ~~~~~l~~~~~~~~~p~wS----PDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~---~~~-~--~~~~ 303 (623)
+..+..+.+ ..+..+| |||++|+...... ..+.++|..+...+ ..+..+. +.. . ...+
T Consensus 233 --v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~-------~~v~ViD~~t~~~~--~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 233 --VAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWP-------PQYVIMDGETLEPK--KIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp --EEEEECCSE-EEEEEECCSTTCTTTEEEEEEEET-------TEEEEEETTTCCEE--EEEECCEECTTTCCEESCCCE
T ss_pred --eEEEecCCC-CceeEEccccCCCCCEEEEEEccC-------CeEEEEECCCCcEE--EEEeccccccccccccCCCce
Confidence 334433332 3356799 7999987765332 34788887665321 1121111 000 0 0122
Q ss_pred cCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 304 TEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
.....++++..+++... ...+|+.+|..+.+...++.-.. +.. .....| ++++++++.+... ...|
T Consensus 301 a~i~~s~~~~~~vv~~~--~~g~v~~vd~~~~~~~~v~~i~~--~~~-----~~d~~~---~pdgr~~~va~~~--sn~V 366 (567)
T 1qks_A 301 AAILASHYRPEFIVNVK--ETGKILLVDYTDLNNLKTTEISA--ERF-----LHDGGL---DGSHRYFITAANA--RNKL 366 (567)
T ss_dssp EEEEECSSSSEEEEEET--TTTEEEEEETTCSSEEEEEEEEC--CSS-----EEEEEE---CTTSCEEEEEEGG--GTEE
T ss_pred EEEEEcCCCCEEEEEec--CCCeEEEEecCCCccceeeeeec--ccc-----ccCceE---CCCCCEEEEEeCC--CCeE
Confidence 34556777664444444 33467788876543222221100 000 011222 2388877777643 4457
Q ss_pred EEEeCCCCceee-ccc-CCc-----ceEeeeecCCEEEEEEecCCCCCeEEEEEcCC
Q 006979 384 GILDDFGHSLSL-LDI-PFT-----DIDNITLGNDCLFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 384 ~~~d~~~~~~~~-lt~-~~~-----~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~ 433 (623)
.++|.+++++.. +.. +.. ...-+.++++.++++..- ....|.+++.+.
T Consensus 367 ~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~ 421 (567)
T 1qks_A 367 VVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM--GDDSVALIGTDP 421 (567)
T ss_dssp EEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCT
T ss_pred EEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCC--CCCeEEEecCCC
Confidence 889999887643 333 211 111125556777655431 224577888776
No 416
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.21 E-value=5.7e-05 Score=77.77 Aligned_cols=130 Identities=8% Similarity=-0.115 Sum_probs=78.9
Q ss_pred eCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCC--CceEE
Q 006979 198 FDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW--DKAEL 275 (623)
Q Consensus 198 ~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~--~~~~L 275 (623)
..|||++++...+.+.. ..+.++++|.++++. +..+..+... ...+||||++||...+-.+...+ ....|
T Consensus 40 ~~pd~~~vyV~~~~~~~----~~~~V~ViD~~t~~v--~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFA----AVTQQFVIDGEAGRV--IGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCTTEEEEEECGGGC----SSEEEEEEETTTTEE--EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred cCCCCCEEEEEcCcccC----CCCEEEEEECCCCeE--EEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEE
Confidence 46999988776653211 127899999998873 3344434332 37899999999876531110000 12458
Q ss_pred EEEEecCCCceeeeEEEcCC-CCC-ccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE
Q 006979 276 WVGYISENGDVYKRVCVAGF-DPT-IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 276 ~v~d~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~ 338 (623)
.++|..+...+ ..+..+. ... -........++|||+.+|+++. .....+..+|..+++..
T Consensus 112 sviD~~t~~v~--~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~-~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 112 EVFDPVTLLPT--ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF-SPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp EEECTTTCCEE--EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-SSSCEEEEEETTTTEEE
T ss_pred EEEECCCCeEE--EEEECCCccccccCCCCceEEEcCCCCEEEEEEc-CCCCeEEEEECCCCcEE
Confidence 89998876432 2222221 100 0024567899999996667765 33457889999998754
No 417
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.21 E-value=3.5e-06 Score=85.39 Aligned_cols=101 Identities=12% Similarity=0.057 Sum_probs=66.6
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|.||++||.........|...+..| ..||.|+.+|+||.|..... ...+ ....+|+.+.++.+.. .+
T Consensus 81 ~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~-----~~~~-~~~~~~~~~~l~~~~~-----~~ 148 (319)
T 3lcr_A 81 GPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGGQAL-----PATL-TVLVRSLADVVQAEVA-----DG 148 (319)
T ss_dssp SCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTTCCE-----ESSH-HHHHHHHHHHHHHHHT-----TS
T ss_pred CCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCCCCC-----CCCH-HHHHHHHHHHHHHhcC-----CC
Confidence 47889999942233344666777777 78999999999996532111 1100 1113344444444331 26
Q ss_pred ceEEEEcChHHHHHHHHh-cC---CCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AF---RDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~---~~~f~a~v~~~g~ 607 (623)
++.++|||+||.+++.++ .+ ++.++++|...+.
T Consensus 149 ~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~ 185 (319)
T 3lcr_A 149 EFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSY 185 (319)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCC
T ss_pred CEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCC
Confidence 899999999999999888 55 7888888877654
No 418
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.20 E-value=0.00078 Score=66.20 Aligned_cols=276 Identities=12% Similarity=0.069 Sum_probs=140.9
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccC-CCCCccceeeeecCCceEEEeCC-EEEEEeCCCCc
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDIT-PKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~-p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~ 166 (623)
..+..+.+++++.+|..... .+ .|++++.. + +..... +... ......+.+++ .+++....++.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~---~~--~v~~~d~~-~-~~~~~~~~~~~--------~~~~~i~~~~~g~l~v~~~~~~~ 79 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHK---AN--MISCINLD-G-KITEYPLPTPD--------AKVMCLTISSDGEVWFTENAANK 79 (299)
T ss_dssp CCEEEEEECTTSCEEEEETT---TT--EEEEECTT-C-CEEEEECSSTT--------CCEEEEEECTTSCEEEEETTTTE
T ss_pred CCccceEECCCCCEEEEecC---CC--cEEEEcCC-C-CeEEecCCccc--------CceeeEEECCCCCEEEeCCCCCe
Confidence 34567777775666665421 12 35666554 2 332221 2110 01223444444 67777666778
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc--cCCC
Q 006979 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV--SGSD 244 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~--~~~~ 244 (623)
|++++.+ + ..+.+... ..........++|+|+.++ ..... ..|+++|. +++ ...+. ....
T Consensus 80 i~~~~~~-g--~~~~~~~~--~~~~~~~~i~~~~~g~l~v-~~~~~--------~~i~~~d~-~g~---~~~~~~~~~~~ 141 (299)
T 2z2n_A 80 IGRITKK-G--IIKEYTLP--NPDSAPYGITEGPNGDIWF-TEMNG--------NRIGRITD-DGK---IREYELPNKGS 141 (299)
T ss_dssp EEEECTT-S--CEEEEECS--STTCCEEEEEECTTSCEEE-EETTT--------TEEEEECT-TCC---EEEEECSSTTC
T ss_pred EEEECCC-C--cEEEEeCC--CcCCCceeeEECCCCCEEE-EecCC--------ceEEEECC-CCC---EEEecCCCCCC
Confidence 9999986 3 33333311 0123345677899996433 32211 56999998 554 33332 2223
Q ss_pred cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE-EcCCCCCccccCcCceeCCCCcEEEEEeCCCC
Q 006979 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-VAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (623)
Q Consensus 245 ~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g 323 (623)
......++|||+ |++.... ...|++++. ++ . .... ..... ..+....++++|++++. +. +
T Consensus 142 ~~~~i~~~~~g~-l~v~~~~-------~~~i~~~~~-~g-~--~~~~~~~~~~----~~~~~i~~~~~g~l~v~-~~--~ 202 (299)
T 2z2n_A 142 YPSFITLGSDNA-LWFTENQ-------NNAIGRITE-SG-D--ITEFKIPTPA----SGPVGITKGNDDALWFV-EI--I 202 (299)
T ss_dssp CEEEEEECTTSC-EEEEETT-------TTEEEEECT-TC-C--EEEEECSSTT----CCEEEEEECTTSSEEEE-ET--T
T ss_pred CCceEEEcCCCC-EEEEeCC-------CCEEEEEcC-CC-c--EEEeeCCCCC----CcceeEEECCCCCEEEE-cc--C
Confidence 345567999996 6554421 345888887 33 1 2222 22111 33456788899886554 43 2
Q ss_pred eeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccC--Cc
Q 006979 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP--FT 401 (623)
Q Consensus 324 ~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~--~~ 401 (623)
...|+++|+ +++.+.+... ..... ...+.+. +++ .+++.. .+...|+++|.+ ++.+.+..+ ..
T Consensus 203 ~~~i~~~~~-~g~~~~~~~~-~~~~~------~~~i~~~---~~g-~l~v~~--~~~~~i~~~d~~-g~~~~~~~~~~~~ 267 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKIP-TPNAR------PHAITAG---AGI-DLWFTE--WGANKIGRLTSN-NIIEEYPIQIKSA 267 (299)
T ss_dssp TTEEEEECT-TCCEEEEECS-STTCC------EEEEEEC---STT-CEEEEE--TTTTEEEEEETT-TEEEEEECSSSSC
T ss_pred CceEEEECC-CCcEEEEECC-CCCCC------ceeEEEC---CCC-CEEEec--cCCceEEEECCC-CceEEEeCCCCCC
Confidence 346888998 6665544211 01111 1122332 243 466654 234568888884 555554322 22
Q ss_pred ceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 402 DIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 402 ~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
....+...++.+++... ...|+++++++++
T Consensus 268 ~~~~i~~~~g~l~v~~~----~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 268 EPHGICFDGETIWFAME----CDKIGKLTLIKDN 297 (299)
T ss_dssp CEEEEEECSSCEEEEET----TTEEEEEEEC---
T ss_pred ccceEEecCCCEEEEec----CCcEEEEEcCccc
Confidence 23344225566666542 2567888776554
No 419
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.19 E-value=0.00029 Score=69.52 Aligned_cols=233 Identities=7% Similarity=-0.049 Sum_probs=120.4
Q ss_pred eCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCC
Q 006979 153 FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (623)
Q Consensus 153 s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~ 232 (623)
+++.+++....++.|+++|.++| ....++... . .....+..++|+|+.++ ..+ ..++.+|. +|+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG-~~~w~~~~~--~-~~~~~~~~~~pdG~ilv--s~~---------~~V~~~d~-~G~ 66 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK-EIVWEYPLE--K-GWECNSVAATKAGEILF--SYS---------KGAKMITR-DGR 66 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT-EEEEEEECC--T-TCCCCEEEECTTSCEEE--ECB---------SEEEEECT-TSC
T ss_pred CCCcEEEeeCCCCEEEEEECCCC-eEEEEeCCC--c-cCCCcCeEECCCCCEEE--eCC---------CCEEEECC-CCC
Confidence 35678888777888999998777 233334332 0 12345677999998665 221 46899999 454
Q ss_pred cccceecccCC-CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCC
Q 006979 233 IQEPKVLVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 311 (623)
Q Consensus 233 ~~~~~~l~~~~-~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~D 311 (623)
. +..+..+. .......++|||+.|+-.. .. ..+|+.++.++. .+... .+.................+|
T Consensus 67 ~--~W~~~~~~~~~~~~~~~~~dG~~lv~~~-~~------~~~v~~vd~~Gk-~l~~~-~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 67 E--LWNIAAPAGCEMQTARILPDGNALVAWC-GH------PSTILEVNMKGE-VLSKT-EFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp E--EEEEECCTTCEEEEEEECTTSCEEEEEE-ST------TEEEEEECTTSC-EEEEE-EECCSCSSGGGSCSCCEECTT
T ss_pred E--EEEEcCCCCccccccEECCCCCEEEEec-CC------CCEEEEEeCCCC-EEEEE-eccCCCCcccccccCceECCC
Confidence 2 33443322 2334567899999765433 21 345777765432 11111 111110010012335567899
Q ss_pred CcEEEEEeCCCCeeeEEEEecCCCeE-EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 312 GELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 312 G~l~~~~~~~~g~~~L~~~d~~~~~~-~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
|++++... +...|+.+|++ |+. ..+.... .+ .....+ ++++ +++....+ .+|+.+|+++
T Consensus 136 G~~lv~~~---~~~~v~~~d~~-G~~~w~~~~~~----~~------~~~~~~---~~g~-~~v~~~~~--~~v~~~d~~t 195 (276)
T 3no2_A 136 GNYLVPLF---ATSEVREIAPN-GQLLNSVKLSG----TP------FSSAFL---DNGD-CLVACGDA--HCFVQLNLES 195 (276)
T ss_dssp SCEEEEET---TTTEEEEECTT-SCEEEEEECSS----CC------CEEEEC---TTSC-EEEECBTT--SEEEEECTTT
T ss_pred CCEEEEec---CCCEEEEECCC-CCEEEEEECCC----Cc------cceeEc---CCCC-EEEEeCCC--CeEEEEeCcC
Confidence 98655433 23468899988 543 3332221 11 112222 1444 44444322 3699999995
Q ss_pred Cce-eecccCC------cceEee-eecCCEEEEEEe-cCC------CCCeEEEEEcC
Q 006979 391 HSL-SLLDIPF------TDIDNI-TLGNDCLFVEGA-SGV------EPSSVAKVTLD 432 (623)
Q Consensus 391 ~~~-~~lt~~~------~~v~~~-~~~~~~~~~~~~-s~~------~~~~ly~~~l~ 432 (623)
|++ .++.... ....++ ...++.+++... ... ...+++.++.+
T Consensus 196 G~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~ 252 (276)
T 3no2_A 196 NRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSE 252 (276)
T ss_dssp CCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTT
T ss_pred CcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCC
Confidence 554 3443211 112333 223444555443 221 34578887753
No 420
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.19 E-value=3.6e-05 Score=81.29 Aligned_cols=155 Identities=8% Similarity=0.005 Sum_probs=95.5
Q ss_pred CceEEEeC--CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCC-CCCEEEEEEeccCCCCCCceeEE
Q 006979 147 GGAFRIFG--DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEI 223 (623)
Q Consensus 147 ~~~~~~s~--d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~~~~~~~~L 223 (623)
+.+.++++ +.++.+...++.|.++|+.++ .....+... .....+....|+| ++++|+....| ..|
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-~~~~~~~~~--gH~~~V~~l~f~p~~~~~l~s~s~D---------~~v 189 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-DKPTFIKGI--GAGGSITGLKFNPLNTNQFYASSME---------GTT 189 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCC-SCCEEECCC--SSSCCCCEEEECSSCTTEEEEECSS---------SCE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-CceeEEEcc--CCCCCEEEEEEeCCCCCEEEEEeCC---------CEE
Confidence 55667764 356777778899999999876 223333321 1134567889998 67776654443 447
Q ss_pred EEEEcCCCCcccceecccCC---CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 224 VAIALNGQNIQEPKVLVSGS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 224 ~~idl~~g~~~~~~~l~~~~---~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
.++|+.++. .+.+.... .......|+|||+.|+....+ ..|+++|+++. ....+.+..
T Consensus 190 ~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~~----~~~~~~~h~---- 250 (435)
T 4e54_B 190 RLQDFKGNI---LRVFASSDTINIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDGK----ELWNLRMHK---- 250 (435)
T ss_dssp EEEETTSCE---EEEEECCSSCSCCCCCEEEETTTTEEEEECSS--------SBEEEEESSSC----BCCCSBCCS----
T ss_pred EEeeccCCc---eeEEeccCCCCccEEEEEECCCCCEEEEEeCC--------CcEeeeccCcc----eeEEEeccc----
Confidence 788998765 44443322 234457899999988765422 23888888654 222233333
Q ss_pred ccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCC
Q 006979 301 ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN 335 (623)
Q Consensus 301 ~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~ 335 (623)
..+....|+|+++ +++.... ++.-+|| |+.+.
T Consensus 251 ~~v~~v~~~p~~~~~~~s~s~-d~~v~iw--d~~~~ 283 (435)
T 4e54_B 251 KKVTHVALNPCCDWFLATASV-DQTVKIW--DLRQV 283 (435)
T ss_dssp SCEEEEEECTTCSSEEEEEET-TSBCCEE--ETTTC
T ss_pred ceEEeeeecCCCceEEEEecC-cceeeEE--ecccc
Confidence 4567889999998 6665554 4554554 55443
No 421
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.19 E-value=0.00018 Score=74.18 Aligned_cols=210 Identities=11% Similarity=0.088 Sum_probs=115.0
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCc----cceeeeecCCceEEEeC-C-EEEEEe
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYA----VRTTAQEYGGGAFRIFG-D-TVIFSN 161 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~----~r~~~~~~g~~~~~~s~-d-~l~f~~ 161 (623)
..+..+.|+| ++.++..-.. +|...+|..... ............ .....|...+.+..+++ + .++++.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~---dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS---DGVIVLYDLENS--SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET---TSCEEEEECCCC--SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcC---CCeEEEEECCCC--cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 4556788888 6666665543 477777766533 111111100000 00001233344566665 3 456666
Q ss_pred CCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCC---CCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccccee
Q 006979 162 YKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP---RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (623)
Q Consensus 162 ~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sP---dG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~ 238 (623)
..++.|.++|+.++ .....+.. ........++| +++.++....+ ..|.++|+.+++. ...
T Consensus 119 ~~d~~i~iwd~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~d~~~~~~--~~~ 181 (408)
T 4a11_B 119 SFDKTLKVWDTNTL-QTADVFNF-----EETVYSHHMSPVSTKHCLVAVGTRG---------PKVQLCDLKSGSC--SHI 181 (408)
T ss_dssp ETTSEEEEEETTTT-EEEEEEEC-----SSCEEEEEECSSCSSCCEEEEEESS---------SSEEEEESSSSCC--CEE
T ss_pred eCCCeEEEeeCCCC-ccceeccC-----CCceeeeEeecCCCCCcEEEEEcCC---------CeEEEEeCCCcce--eee
Confidence 67888999999876 22222322 12234455666 55566665443 4588899987752 344
Q ss_pred cccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE---------------cCCCCCccccC
Q 006979 239 LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV---------------AGFDPTIVESP 303 (623)
Q Consensus 239 l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~---------------~~~~~~~~~~~ 303 (623)
+......+....|+|||+++++....+ ..|.++|+..+.. ....+ .... ..+
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~d-------g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~v 248 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASAD-------SRVKLWDVRRASG--CLITLDQHNGKKSQAVESANTAHN----GKV 248 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTCSSC--CSEECCTTTTCSCCCTTTSSCSCS----SCE
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCC-------CcEEEEECCCCCc--ccccccccccccceeecccccccc----Cce
Confidence 444445566788999999755554332 2388888876531 11111 1111 345
Q ss_pred cCceeCCCCcEEEEEeCCCCeeeEEEEecCCCe
Q 006979 304 TEPKWSSKGELFFVTDRKNGFWNLHKWIESNNE 336 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~ 336 (623)
....|+|||++++.... ++. |..+|+.+++
T Consensus 249 ~~~~~~~~~~~l~~~~~-dg~--i~vwd~~~~~ 278 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGT-DNR--MRLWNSSNGE 278 (408)
T ss_dssp EEEEECTTSSEEEEEET-TSC--EEEEETTTCC
T ss_pred eEEEEcCCCCEEEEecC-CCe--EEEEECCCCc
Confidence 67899999985544443 344 4555655543
No 422
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.18 E-value=0.00015 Score=73.44 Aligned_cols=148 Identities=9% Similarity=-0.026 Sum_probs=79.2
Q ss_pred CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc---
Q 006979 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS--- 241 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~--- 241 (623)
+.|+++|.+++ ........ .......+.+++|+|+ |++ .... ...|+++|+++.. ..+..+..
T Consensus 69 ~~i~~~d~~~g--~~~~~~~~--~~~~~p~gia~d~~g~-l~v-~d~~-------~~~v~~~~~~g~~-~~~~~~~~~~~ 134 (329)
T 3fvz_A 69 DTILVIDPNNA--EILQSSGK--NLFYLPHGLSIDTDGN-YWV-TDVA-------LHQVFKLDPHSKE-GPLLILGRSMQ 134 (329)
T ss_dssp CCEEEECTTTC--CEEEEECT--TTCSSEEEEEECTTSC-EEE-EETT-------TTEEEEECTTCSS-CCSEEESBTTB
T ss_pred CcEEEEECCCC--eEEeccCC--CccCCceEEEECCCCC-EEE-EECC-------CCEEEEEeCCCCe-EEEEEecccCC
Confidence 36999998766 33222111 1112345678999998 444 3321 1579999987652 00333321
Q ss_pred ----CCC--cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCC------CCccccCcCceeC
Q 006979 242 ----GSD--FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD------PTIVESPTEPKWS 309 (623)
Q Consensus 242 ----~~~--~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ws 309 (623)
... .....+++|++..|++.... ....|++++.++. ....+.... +.....+..++++
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~------~~~~I~~~~~~g~----~~~~~~~~g~~~~~~~~~~~~p~gia~d 204 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGY------CNSRIVQFSPSGK----FVTQWGEESSGSSPRPGQFSVPHSLALV 204 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECS------SCCEEEEECTTSC----EEEEECEECCSSSCCTTEESCEEEEEEE
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCC------CCCeEEEEcCCCC----EEEEeccCCCCCCCCCcccCCCcEEEEE
Confidence 111 23345799944447666521 1345888884432 222221110 0111235677899
Q ss_pred CCCcEEEEEeCCCCeeeEEEEecCCCeEE
Q 006979 310 SKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 310 ~DG~l~~~~~~~~g~~~L~~~d~~~~~~~ 338 (623)
||+..+|+++. +..+|.++|+++++..
T Consensus 205 ~~~g~l~v~d~--~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 205 PHLDQLCVADR--ENGRIQCFKTDTKEFV 231 (329)
T ss_dssp TTTTEEEEEET--TTTEEEEEETTTCCEE
T ss_pred CCCCEEEEEEC--CCCEEEEEECCCCcEE
Confidence 99445556665 4457888998866543
No 423
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=98.18 E-value=2.6e-06 Score=83.27 Aligned_cols=110 Identities=9% Similarity=-0.109 Sum_probs=69.5
Q ss_pred EEEEecCCCCCcccCcCCHHhHHHHcCceE---E----------EEECCCCCCCCchhHHHhh--ccCCc-cchHHHHHH
Q 006979 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWA---F----------VDVNYGGSTGYGREFRERL--LGRWG-IVDVNDCCS 560 (623)
Q Consensus 497 liv~~hGg~~~~~~~~~~~~~~~~a~~G~~---v----------~~~d~rGs~~~g~~~~~~~--~~~~g-~~~~~D~~~ 560 (623)
.||++||.. .....|...++.|+++|+. + +.+|-++.+..+....... ..... ....+|+.+
T Consensus 5 pvvllHG~~--~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~ 82 (254)
T 3ds8_A 5 PIILIHGSG--GNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKI 82 (254)
T ss_dssp CEEEECCTT--CCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHHH
T ss_pred CEEEECCCC--CCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHHH
Confidence 367899984 4445688889999988764 2 3333221111111000000 00011 123567777
Q ss_pred HHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cCCC-----ceeEEEecccCCCH
Q 006979 561 CATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AFRD-----TFKAGASLYGVSIP 610 (623)
Q Consensus 561 ~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~~~-----~f~a~v~~~g~~d~ 610 (623)
+++++.++..+ +++.++||||||.+++.++ .+|+ .+++.|.+++..+.
T Consensus 83 ~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g 136 (254)
T 3ds8_A 83 AMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFND 136 (254)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTC
T ss_pred HHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCc
Confidence 77888775323 6999999999999999988 7887 89999999987654
No 424
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=98.17 E-value=2.9e-06 Score=85.04 Aligned_cols=104 Identities=9% Similarity=-0.024 Sum_probs=70.5
Q ss_pred CCCCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHH-HHHhCCC
Q 006979 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCAT-FLVGSGK 570 (623)
Q Consensus 492 ~~~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~-~l~~~~~ 570 (623)
+...|.||++||.+.......|......+. .+|.|+.+|+||.|.... ....++++.+.+. .+.+.
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~----------~~~~~~~~a~~~~~~l~~~-- 130 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEGEP----------LPSSMAAVAAVQADAVIRT-- 130 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTSSTTCC----------BCSSHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCCCCCCC----------CCCCHHHHHHHHHHHHHHh--
Confidence 344578999999854332245666666665 469999999999654221 1123444444433 44443
Q ss_pred CCCCceEEEEcChHHHHHHHHh-cCC---CceeEEEecccCC
Q 006979 571 ADEKRLCITGGSAGGYTTLAAL-AFR---DTFKAGASLYGVS 608 (623)
Q Consensus 571 ~d~~rv~i~G~S~GG~~~~~~~-~~~---~~f~a~v~~~g~~ 608 (623)
.+.+++.++|||+||.+++.++ .+| +.++++|...+..
T Consensus 131 ~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~ 172 (300)
T 1kez_A 131 QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYP 172 (300)
T ss_dssp CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCC
T ss_pred cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCC
Confidence 2346899999999999999988 766 5899999887764
No 425
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.17 E-value=0.00029 Score=70.55 Aligned_cols=205 Identities=10% Similarity=-0.030 Sum_probs=111.5
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCcee---cCCCCCCCCeeecceeeCC--CCCEEEEEEeccCCCCCCce
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLP---ITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~---Lt~~~~~~~~~~~d~~~sP--dG~~l~~v~~~~~~~~~~~~ 220 (623)
+.+..++++ ..+++...++.|.++++.++....+. +... ........|+| |++.|+....+
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~d~~~l~s~~~d--------- 80 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH----DSSIVAIDWASPEYGRIIASASYD--------- 80 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC----SSCEEEEEECCGGGCSEEEEEETT---------
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC----CCcEEEEEEcCCCCCCEEEEEcCC---------
Confidence 445566555 45566667888999998754111122 2221 23466788999 68888776654
Q ss_pred eEEEEEEcCCCCc-------ccceecccCCCcccceeeCCC--CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE
Q 006979 221 TEIVAIALNGQNI-------QEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC 291 (623)
Q Consensus 221 ~~L~~idl~~g~~-------~~~~~l~~~~~~~~~p~wSPD--G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~ 291 (623)
..|.++|+.++.. .....+...........|+|| |+.|+....+ ..|.++|+..+..+.....
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--------GILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------CEEEEEECSSTTCTTCCEE
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC--------CcEEEecCCChHHhccccc
Confidence 4477778876531 002223333445566789999 9988876533 3488889876643111110
Q ss_pred ---E--cC-CCCCccccCcCceeCCC---CcEEEEEeCCCCeeeEEEEecCCCeEEEEee---cccccccccccccCcce
Q 006979 292 ---V--AG-FDPTIVESPTEPKWSSK---GELFFVTDRKNGFWNLHKWIESNNEVLAIYS---LDAEFSRPLWVFGINSY 359 (623)
Q Consensus 292 ---~--~~-~~~~~~~~~~~~~ws~D---G~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~---~~~~~~~~~w~~~~~~~ 359 (623)
. .. ....-...+....|+|+ ++++++... ++. +...+...++...+.. ....+....|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-~~~--~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p----- 224 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-EQA--IIYQRGKDGKLHVAAKLPGHKSLIRSISWAP----- 224 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-TEE--EEEEECTTSCEEEEEECCCCCSCEEEEEECC-----
T ss_pred cccccccccccCCcccceeEEEeccCCCCCcEEEEecC-CCc--EEEEccCCCceeeeeecCCCCcceeEEEECC-----
Confidence 0 00 00001135567889997 665555554 333 2333344554433332 122222233332
Q ss_pred eEEeecCCCC---EEEEEEEECCeEEEEEEe
Q 006979 360 EIIQSHGEKN---LIACSYRQNGRSYLGILD 387 (623)
Q Consensus 360 ~~l~~s~~~~---~l~~~~~~~g~~~L~~~d 387 (623)
++. .++++...+|.-++|-+.
T Consensus 225 -------~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 225 -------SIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp -------CSSCSSEEEEEEETTSCEEEEEEE
T ss_pred -------CCCCcceEEEEEcCCCeEEEEeCC
Confidence 442 567777777877777665
No 426
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.17 E-value=0.0016 Score=65.19 Aligned_cols=238 Identities=9% Similarity=0.001 Sum_probs=128.4
Q ss_pred CceEEEeCC--EEEEEeCCCCcEEEEeCCCCCCC----ceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCce
Q 006979 147 GGAFRIFGD--TVIFSNYKDQRLYKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 147 ~~~~~~s~d--~l~f~~~~~~~l~~~d~~~g~~~----~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~ 220 (623)
+.+.+++++ .++++...|+.|.++|+..+... .+.+... ........|+|||++|+....+
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h----~~~V~~~~~s~dg~~l~s~~~d--------- 107 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH----SHFVSDVVISSDGQFALSGSWD--------- 107 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC----CCCEEEEEECCCCCEEEEEccc---------
Confidence 455666654 57778778888999988754111 1122221 2345678899999988776554
Q ss_pred eEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE-cCCCCCc
Q 006979 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AGFDPTI 299 (623)
Q Consensus 221 ~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~-~~~~~~~ 299 (623)
..+...+...+.. ...............++|+++.|+....+. .+.+.|+.... ..... .+..
T Consensus 108 ~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~--------~~~~~d~~~~~---~~~~~~~~~~--- 171 (340)
T 4aow_A 108 GTLRLWDLTTGTT--TRRFVGHTKDVLSVAFSSDNRQIVSGSRDK--------TIKLWNTLGVC---KYTVQDESHS--- 171 (340)
T ss_dssp SEEEEEETTTTEE--EEEEECCSSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCE---EEEECSSSCS---
T ss_pred ccceEEeecccce--eeeecCCCCceeEEEEeecCccceeecCCC--------eEEEEEeCCCc---eEEEEecccc---
Confidence 4577788776641 122222333444567999999887665433 26666765541 12221 2222
Q ss_pred cccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEeecCCCCEEEEEEEE
Q 006979 300 VESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ 377 (623)
Q Consensus 300 ~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~ 377 (623)
..+....|++++. .++++...++ .|..+|..+++...... ....+.. +.+. |+++. +++...
T Consensus 172 -~~v~~~~~~~~~~~~~~~s~~~d~--~i~i~d~~~~~~~~~~~~h~~~v~~---------~~~s---~~~~~-l~s~s~ 235 (340)
T 4aow_A 172 -EWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLANCKLKTNHIGHTGYLNT---------VTVS---PDGSL-CASGGK 235 (340)
T ss_dssp -SCEEEEEECSCSSSCEEEEEETTS--CEEEEETTTTEEEEEECCCSSCEEE---------EEEC---TTSSE-EEEEET
T ss_pred -CcccceEEccCCCCcEEEEEcCCC--EEEEEECCCCceeeEecCCCCcEEE---------EEEC---CCCCE-EEEEeC
Confidence 3455678888876 4433332133 45666777776443332 2222222 2232 26654 445555
Q ss_pred CCeEEEEEEeCCCCceeecccCCcceEee-eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 378 NGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 378 ~g~~~L~~~d~~~~~~~~lt~~~~~v~~~-~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
++.-+| +|+.+++....-.....+..+ ...++.++..+.+ ..|...+++++.
T Consensus 236 Dg~i~i--wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d----~~i~iwd~~~~~ 288 (340)
T 4aow_A 236 DGQAML--WDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG----PSIKIWDLEGKI 288 (340)
T ss_dssp TCEEEE--EETTTTEEEEEEECSSCEEEEEECSSSSEEEEEET----TEEEEEETTTTE
T ss_pred CCeEEE--EEeccCceeeeecCCceEEeeecCCCCceeeccCC----CEEEEEECCCCe
Confidence 665444 576665443222222334444 2233444443332 467788887664
No 427
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.16 E-value=0.00039 Score=71.41 Aligned_cols=130 Identities=5% Similarity=-0.048 Sum_probs=72.8
Q ss_pred CCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCC--CceEEEE
Q 006979 200 PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW--DKAELWV 277 (623)
Q Consensus 200 PdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~--~~~~L~v 277 (623)
|++++++.+...... -..+.++++|.++++. ...+..+. .. ...+||||++||..........+ ....|.+
T Consensus 13 ~~~~~~yv~~~~~~~---~~d~~v~v~D~~t~~~--~~~i~~g~-~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 13 PQENRIYVMDSVFMH---LTESRVHVYDYTNGKF--LGMVPTAF-NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp CGGGEEEEEECCGGG---GGGCEEEEEETTTCCE--EEEEECCE-EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCCCEEEEECCCCCc---cccCeEEEEECCCCeE--EEEecCCC-CC-ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence 477776655432211 0125899999988873 23333332 22 67899999998876531100000 1345888
Q ss_pred EEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE
Q 006979 278 GYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 278 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~ 338 (623)
+|+.+...+.... +......-...+..+.++|||+.+|+++. .....|..+|+++++..
T Consensus 86 ~d~~t~~~~~~i~-~~~~~~~~g~~p~~i~~spdg~~l~v~n~-~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 86 WDADKLTFEKEIS-LPPKRVQGLNYDGLFRQTTDGKFIVLQNA-SPATSIGIVDVAKGDYV 144 (361)
T ss_dssp EETTTCCEEEEEE-ECTTBCCBCCCGGGEEECTTSSEEEEEEE-SSSEEEEEEETTTTEEE
T ss_pred EECcCCcEEEEEE-cCccccccCCCcceEEECCCCCEEEEECC-CCCCeEEEEECCCCcEE
Confidence 8987653221111 11110000024567899999997777765 22456888898887643
No 428
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.16 E-value=4.7e-05 Score=73.50 Aligned_cols=200 Identities=8% Similarity=-0.096 Sum_probs=113.2
Q ss_pred EEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcC
Q 006979 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (623)
Q Consensus 150 ~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~ 229 (623)
+.++++.+|++...+++|.++|++++ ...+.+.+. .. +. -...++|++|+...+.. +.++++|++
T Consensus 60 L~~~~~~Ly~stG~~g~v~~iD~~Tg-kv~~~~l~~----~~-Fg-eGit~~g~~Ly~ltw~~--------~~v~V~D~~ 124 (268)
T 3nok_A 60 LVFHQGHFFESTGHQGTLRQLSLESA-QPVWMERLG----NI-FA-EGLASDGERLYQLTWTE--------GLLFTWSGM 124 (268)
T ss_dssp EEEETTEEEEEETTTTEEEECCSSCS-SCSEEEECT----TC-CE-EEEEECSSCEEEEESSS--------CEEEEEETT
T ss_pred EEEECCEEEEEcCCCCEEEEEECCCC-cEEeEECCC----Cc-ce-eEEEEeCCEEEEEEccC--------CEEEEEECC
Confidence 34557789999888888999999988 334444211 11 11 12456777887765533 789999999
Q ss_pred CCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeC
Q 006979 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (623)
Q Consensus 230 ~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws 309 (623)
+.+. +..+.-+.+ +-..++||++|+. + +. ..+|+++|.++...+ ..+..+..+.-...+....|.
T Consensus 125 Tl~~--~~ti~~~~e---GwGLt~Dg~~L~v-S-dG------s~~l~~iDp~T~~v~--~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 125 PPQR--ERTTRYSGE---GWGLCYWNGKLVR-S-DG------GTMLTFHEPDGFALV--GAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp TTEE--EEEEECSSC---CCCEEEETTEEEE-E-CS------SSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE
T ss_pred cCcE--EEEEeCCCc---eeEEecCCCEEEE-E-CC------CCEEEEEcCCCCeEE--EEEEeCCCCcccccccccEEe
Confidence 8763 334433222 2346689997754 4 33 346999998776432 222221111101233456786
Q ss_pred CCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecc-c--ccc--cccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 310 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD-A--EFS--RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 310 ~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~-~--~~~--~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
||++| +... ....|.++|+++++........ . ... ...-..-.+.+++. |+++.||++- .-+..||
T Consensus 190 -dG~ly-anvw--~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~d---p~~~rlfVTG--K~Wp~~~ 260 (268)
T 3nok_A 190 -NGVIY-ANIW--HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVE---PGSGRIFMTG--KLWPRLF 260 (268)
T ss_dssp -TTEEE-EEET--TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEEC---TTTCCEEEEE--TTCSEEE
T ss_pred -CCEEE-EEEC--CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEc---CCCCEEEEeC--CCCCceE
Confidence 78655 5554 2348999999999865544221 0 000 00000111334443 3677787765 4567777
Q ss_pred EEeC
Q 006979 385 ILDD 388 (623)
Q Consensus 385 ~~d~ 388 (623)
.+.+
T Consensus 261 ev~~ 264 (268)
T 3nok_A 261 EVRL 264 (268)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7643
No 429
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.16 E-value=0.00036 Score=73.06 Aligned_cols=127 Identities=8% Similarity=-0.174 Sum_probs=75.7
Q ss_pred CCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCC--CceEEEE
Q 006979 200 PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW--DKAELWV 277 (623)
Q Consensus 200 PdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~--~~~~L~v 277 (623)
|++++++........ ..+.|.++|++++++ +..+.-+.. . +..+||||++||........... ....|.+
T Consensus 82 ~~~~~vyV~n~~~~~----~~~~VsVID~~t~~v--v~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv 153 (426)
T 3c75_H 82 PDARRVYIQDPAHFA----AITQQFVIDGSTGRI--LGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEV 153 (426)
T ss_dssp CCTTEEEEEECTTTC----SSEEEEEEETTTTEE--EEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCC----CCCeEEEEECCCCEE--EEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEEE
Confidence 677776555442111 116899999999873 334443433 3 68899999999876531000000 1345899
Q ss_pred EEecCCCceeeeEEEcC-CCCCc--cccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE
Q 006979 278 GYISENGDVYKRVCVAG-FDPTI--VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 278 ~d~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~ 338 (623)
+|..+... ...+..+ .. .+ ......+.++|||+.+|+++. .....|..+|+.+++..
T Consensus 154 iD~~t~~v--v~~I~v~g~~-r~~~g~~P~~~~~spDGk~lyV~n~-~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 154 FDPVTFLP--IADIELPDAP-RFLVGTYQWMNALTPDNKNLLFYQF-SPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp ECTTTCCE--EEEEEETTCC-CCCBSCCGGGSEECTTSSEEEEEEC-SSSCEEEEEETTTTEEE
T ss_pred EECCCCcE--EEEEECCCcc-ccccCCCcceEEEcCCCCEEEEEec-CCCCeEEEEECCCCeEE
Confidence 99887643 2222222 11 00 023568899999996667665 33456889999887743
No 430
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=98.15 E-value=5.7e-06 Score=80.37 Aligned_cols=109 Identities=11% Similarity=0.037 Sum_probs=71.0
Q ss_pred EEEEecCCCCCcccCcCCHHhHHHHcCc---eEEEEECCCCCCC--CchhHH----Hh----hccC--Cc----cchHHH
Q 006979 497 LLVKSHGGPTSEARGILNLSIQYWTSRG---WAFVDVNYGGSTG--YGREFR----ER----LLGR--WG----IVDVND 557 (623)
Q Consensus 497 liv~~hGg~~~~~~~~~~~~~~~~a~~G---~~v~~~d~rGs~~--~g~~~~----~~----~~~~--~g----~~~~~D 557 (623)
-||++||.. .....|...+..|+++| +.|+.+|+++.|. +...+. +. ...+ -+ ....++
T Consensus 6 pvv~iHG~~--~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 6 PVIMVPGSS--ASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CEEEECCCG--GGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CEEEECCCC--CCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 366699983 44456778899999887 5666555444321 111110 00 0000 01 123578
Q ss_pred HHHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-cC-----CCceeEEEecccCCC
Q 006979 558 CCSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-AF-----RDTFKAGASLYGVSI 609 (623)
Q Consensus 558 ~~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-~~-----~~~f~a~v~~~g~~d 609 (623)
+.+++++|.++-. .+++.++||||||.+++..+ .+ ++.++..|.+.+..+
T Consensus 84 l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~ 139 (250)
T 3lp5_A 84 LNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYN 139 (250)
T ss_dssp HHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTT
T ss_pred HHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCC
Confidence 8889999987733 47999999999999999877 55 678999998887654
No 431
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.14 E-value=0.0009 Score=70.00 Aligned_cols=239 Identities=8% Similarity=-0.016 Sum_probs=133.6
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ ..+++...++.|.++|+.++ ...+.+... ..+... ++++++.++....+ ..+++
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~-~~~~~~~~h----~~~v~~--~s~~~~~l~sgs~d---------~~i~~ 213 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-KRLRNMTSH----SARVGS--LSWNSYILSSGSRS---------GHIHH 213 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCC----SSCEEE--EEEETTEEEEEETT---------SEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCC-cEEEEEeCC----CCceEE--EeeCCCEEEEEeCC---------CceeE
Confidence 456677766 56666777888999999876 223333322 223333 45567766654443 45777
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCc-eeeeEEEcCCCCCccccCc
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~ 304 (623)
.|...... .+..+...........|+|+|++|+....|. .+.+.+...+.. ........... ..+.
T Consensus 214 ~d~~~~~~-~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~--------~v~i~~~~~~~~~~~~~~~~~~~~----~~V~ 280 (420)
T 4gga_A 214 HDVRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGNDN--------LVNVWPSAPGEGGWVPLQTFTQHQ----GAVK 280 (420)
T ss_dssp EETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEESSCCSSCSCCSEEECCCS----SCEE
T ss_pred eeecccce-eeEEecccccceeeeeecCCCCeeeeeeccc--------cceEEeeccccccceeeeeecccC----Ccee
Confidence 78766431 1233444444556678999999988766432 277778766532 11122233333 4566
Q ss_pred CceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEE-ECCeEE
Q 006979 305 EPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSY 382 (623)
Q Consensus 305 ~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~-~~g~~~ 382 (623)
...|+|++. ++.+... .....|..+|..+++..........+....|.+ +++.++..+. .++ .
T Consensus 281 ~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~------------~~~~lv~~sg~~d~--~ 345 (420)
T 4gga_A 281 AVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAHSQVCSILWSP------------HYKELISGHGFAQN--Q 345 (420)
T ss_dssp EEEECTTCTTEEEEEEC-TTTCEEEEEETTTTEEEEEEECSSCEEEEEEET------------TTTEEEEEECTTTC--C
T ss_pred eeeeCCCcccEEEEEee-cCCCEEEEEeCCccccceeeccccceeeeeecC------------CCCeEEEEEecCCC--E
Confidence 789999887 6655432 222456677888887554443333333333332 6777666542 234 4
Q ss_pred EEEEeCCCCce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCC
Q 006979 383 LGILDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 383 L~~~d~~~~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~ 433 (623)
|+++|..+++. ..+......|..+ ++++..+ ++++.. ..|...++..
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l-~S~s~D---~tvriWdv~~ 395 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV-ASAAAD---ETLRLWRCFE 395 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE-EEEETT---TEEEEECCSC
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-EEEecC---CeEEEEECCC
Confidence 66667766554 4555444556655 5666644 444432 2344455443
No 432
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.13 E-value=0.00011 Score=76.13 Aligned_cols=242 Identities=11% Similarity=0.021 Sum_probs=125.0
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+..++++ ..+++...|+.|.++|+.++ .....+... ........|+|+|++|+....+ ..+.+
T Consensus 69 V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-~~~~~~~~h----~~~v~~~~~s~~g~~las~~~d---------~~v~i 134 (380)
T 3iz6_a 69 VYSLDWTPEKNWIVSASQDGRLIVWNALTS-QKTHAIKLH----CPWVMECAFAPNGQSVACGGLD---------SACSI 134 (380)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETTTT-EEEEEEECC----CTTCCCCEECTTSSEEEECCSS---------SCCEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ccceEEecC----CCCEEEEEECCCCCEEEEeeCC---------CcEEE
Confidence 345556655 56667778889999999876 222333322 2235667899999988775543 33555
Q ss_pred EEcCCCC-----cccceecccCCCcccceeeCCCCCE-EEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCC-CCC
Q 006979 226 IALNGQN-----IQEPKVLVSGSDFYAFPRMDPRGER-MAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF-DPT 298 (623)
Q Consensus 226 idl~~g~-----~~~~~~l~~~~~~~~~p~wSPDG~~-la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~-~~~ 298 (623)
+++.+.. ....+.+...........|+|++.. |+-.+.| ..|.+.|+.++.. ...+... ...
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D--------~~i~~wd~~~~~~---~~~~~~~~~~~ 203 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD--------QTCVLWDVTTGQR---ISIFGSEFPSG 203 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT--------SCEEEECTTTCCE---EEEECCCSSSS
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC--------CcEEEEEcCCCcE---EEEeecccCCC
Confidence 6665421 0111233333445556789998654 5433322 2377888887632 2222110 000
Q ss_pred ccccCcCceeCC-CCcEEEEEeCCCCeeeEEEEecCC-Ce-EEEEeecccccccccccccCcceeEEeecCCCCEEEEEE
Q 006979 299 IVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESN-NE-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (623)
Q Consensus 299 ~~~~~~~~~ws~-DG~l~~~~~~~~g~~~L~~~d~~~-~~-~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~ 375 (623)
....+....|.+ ++.+++.... ++.-+| +|+.. ++ .+.+......+....|.+ +++. +++.
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~-D~~v~~--wd~~~~~~~~~~~~~h~~~v~~v~~~p------------~~~~-l~s~ 267 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSC-DTTVRL--WDLRITSRAVRTYHGHEGDINSVKFFP------------DGQR-FGTG 267 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEET-TSCEEE--EETTTTCCCCEEECCCSSCCCEEEECT------------TSSE-EEEE
T ss_pred CccCeEEEEeecCCCCEEEEEEC-CCeEEE--EECCCCCcceEEECCcCCCeEEEEEec------------CCCe-EEEE
Confidence 003445667766 6665555544 455444 56542 22 333333323333333332 6554 4455
Q ss_pred EECCeEEEEEEeCCCCceee-cccCC-------cceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 376 RQNGRSYLGILDDFGHSLSL-LDIPF-------TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 376 ~~~g~~~L~~~d~~~~~~~~-lt~~~-------~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
..+|.-+| +|+.+++... +.... ..+..+ ++++..++ .+.. ...++..|+..++
T Consensus 268 s~D~~i~l--wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~g~~---dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 268 SDDGTCRL--FDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF-AGYS---NGDCYVWDTLLAE 331 (380)
T ss_dssp CSSSCEEE--EETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE-EECT---TSCEEEEETTTCC
T ss_pred cCCCeEEE--EECCCCcEEEEecccccccccccCceEEEEECCCCCEEE-EEEC---CCCEEEEECCCCc
Confidence 56666555 4766665432 22111 113333 55665544 4432 2468888877665
No 433
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.12 E-value=5.8e-05 Score=81.10 Aligned_cols=197 Identities=9% Similarity=-0.037 Sum_probs=110.4
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.++++| ..+.+...++.+.+++.++ ....++....-+...+...+|||||++|+...++ +.|.+
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D---------GtVkI 155 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED---------GELQF 155 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT---------SEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC---------CEEEE
Confidence 445666666 3333444677788888542 2333331100001236689999999999887665 56888
Q ss_pred EEcCCCCccc-----ceec----ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE-cCC
Q 006979 226 IALNGQNIQE-----PKVL----VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AGF 295 (623)
Q Consensus 226 idl~~g~~~~-----~~~l----~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~-~~~ 295 (623)
.|+.++...+ ...+ ......+...+||||| |+-...|. .+++++++++........+ .+.
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~--------tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNN--------SVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTC--------CEEEECCCSSSSCCCEEEEECCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCC--------eEEEEECCCCccccceeeecccc
Confidence 8888875211 1333 1122456678899999 55454333 2778888776421112233 233
Q ss_pred CCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeec-ccccccccccccCcceeEEeecCCCCEEEEE
Q 006979 296 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACS 374 (623)
Q Consensus 296 ~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~-~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~ 374 (623)
. ..+...+|+ |+.+..+.. ..|..+|..+++...+..+ ...+. ++.+ +++++ +..+.+
T Consensus 226 ~----~~V~svaFs--g~~LASa~~----~tIkLWd~~~~~~~~~~~gh~~~V~---------~va~-~~s~d-~~~La~ 284 (588)
T 2j04_A 226 R----RKITDLKIV--DYKVVLTCP----GYVHKIDLKNYSISSLKTGSLENFH---------IIPL-NHEKE-STILLM 284 (588)
T ss_dssp S----SCCCCEEEE--TTEEEEECS----SEEEEEETTTTEEEEEECSCCSCCC---------EEEE-TTCSS-CEEEEE
T ss_pred c----CcEEEEEEE--CCEEEEEeC----CeEEEEECCCCeEEEEEcCCCceEE---------EEEe-eeCCC-CCEEEE
Confidence 3 567899999 454434322 3677788888776544422 11121 2233 11224 455666
Q ss_pred EEECCeEEEEEEe
Q 006979 375 YRQNGRSYLGILD 387 (623)
Q Consensus 375 ~~~~g~~~L~~~d 387 (623)
+.++|. +||.+|
T Consensus 285 a~edG~-klw~~d 296 (588)
T 2j04_A 285 SNKTSY-KVLLED 296 (588)
T ss_dssp CSSCEE-EEEESS
T ss_pred EcCCCC-EEEeec
Confidence 666777 888764
No 434
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00016 Score=71.57 Aligned_cols=238 Identities=11% Similarity=0.038 Sum_probs=127.7
Q ss_pred CCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcE
Q 006979 88 SKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (623)
Q Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l 167 (623)
...+..+.|+|++.....-.. +|...+|........+....+.. +...+.++.++++ .+++...++.|
T Consensus 59 ~~~v~~~~~~~~~~~l~~~~~---dg~i~~~~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~-~l~~~~~d~~i 126 (313)
T 3odt_A 59 QGFLNSVCYDSEKELLLFGGK---DTMINGVPLFATSGEDPLYTLIG--------HQGNVCSLSFQDG-VVISGSWDKTA 126 (313)
T ss_dssp SSCEEEEEEETTTTEEEEEET---TSCEEEEETTCCTTSCC-CEECC--------CSSCEEEEEEETT-EEEEEETTSEE
T ss_pred CccEEEEEECCCCCEEEEecC---CCeEEEEEeeecCCCCcccchhh--------cccCEEEEEecCC-EEEEEeCCCCE
Confidence 345667888883334433332 46766776654311111111111 1122345555555 44555567889
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceeccc-CCCc
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GSDF 245 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~-~~~~ 245 (623)
.++|.. . ....+... ........|+| +++.++....+ ..|.++|.... ...+.. ....
T Consensus 127 ~~~d~~-~--~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~----~~~~~~~~~~~ 186 (313)
T 3odt_A 127 KVWKEG-S--LVYNLQAH----NASVWDAKVVSFSENKFLTASAD---------KTIKLWQNDKV----IKTFSGIHNDV 186 (313)
T ss_dssp EEEETT-E--EEEEEECC----SSCEEEEEEEETTTTEEEEEETT---------SCEEEEETTEE----EEEECSSCSSC
T ss_pred EEEcCC-c--EEEecccC----CCceeEEEEccCCCCEEEEEECC---------CCEEEEecCce----EEEEeccCccc
Confidence 999832 1 23333332 23345567777 88887766543 44777773322 333333 3445
Q ss_pred ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCee
Q 006979 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFW 325 (623)
Q Consensus 246 ~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~ 325 (623)
.....|+|||+ |+... . ...|.++|+..+. ....+.+.. ..+....|+|||+++... . ++
T Consensus 187 i~~~~~~~~~~-~~~~~-~-------dg~i~i~d~~~~~---~~~~~~~~~----~~i~~~~~~~~~~l~~~~-~-dg-- 246 (313)
T 3odt_A 187 VRHLAVVDDGH-FISCS-N-------DGLIKLVDMHTGD---VLRTYEGHE----SFVYCIKLLPNGDIVSCG-E-DR-- 246 (313)
T ss_dssp EEEEEEEETTE-EEEEE-T-------TSEEEEEETTTCC---EEEEEECCS----SCEEEEEECTTSCEEEEE-T-TS--
T ss_pred EEEEEEcCCCe-EEEcc-C-------CCeEEEEECCchh---hhhhhhcCC----ceEEEEEEecCCCEEEEe-c-CC--
Confidence 56678999998 55443 2 2358999998763 333444444 456788999999644333 3 34
Q ss_pred eEEEEecCCCeEEEEee-cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 326 NLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 326 ~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
.|..+|..+++...... ....+....|. ++++ ++ +...+|.-++ +|+.+++.
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~------------~~~~-~~-~~~~dg~i~i--w~~~~~~~ 299 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISIWSVDCM------------SNGD-II-VGSSDNLVRI--FSQEKSRW 299 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCEEEEEEC------------TTSC-EE-EEETTSCEEE--EESCGGGC
T ss_pred EEEEEECCCCceeEEEeccCceEEEEEEc------------cCCC-EE-EEeCCCcEEE--EeCCCCce
Confidence 46677877776444332 22223333333 2655 33 4545665444 45555443
No 435
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.10 E-value=0.0024 Score=67.37 Aligned_cols=216 Identities=10% Similarity=0.023 Sum_probs=118.4
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCC-----------------CCeeecceeeCCCCCEEEEEEeccCCCCCC
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGE-----------------PLVSYADGIFDPRFNRYVTVREDRRQDALN 218 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~-----------------~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~ 218 (623)
..+++...++.|.++|+.++ ............ ......-..++|+++.++....+
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------- 289 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKE-SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD------- 289 (464)
T ss_dssp EEEEEEETTSCEEEEECCCC-CCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT-------
T ss_pred CEEEEEcCCCcEEEeeCCCC-cccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC-------
Confidence 66777778888999998765 111110000000 00000112367888887776554
Q ss_pred ceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCC
Q 006979 219 STTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 298 (623)
Q Consensus 219 ~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~ 298 (623)
..|.++|+.+++. ...+...........|+|||++|+....+. .|.++|+..+. ....+.+..
T Consensus 290 --~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg--------~i~vwd~~~~~---~~~~~~~h~-- 352 (464)
T 3v7d_B 290 --NTLIVWDVAQMKC--LYILSGHTDRIYSTIYDHERKRCISASMDT--------TIRIWDLENGE---LMYTLQGHT-- 352 (464)
T ss_dssp --SCEEEEETTTTEE--EEEECCCSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTTTE---EEEEECCCS--
T ss_pred --CeEEEEECCCCcE--EEEecCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCc---EEEEEeCCC--
Confidence 4588899987752 233433344556678999999888665332 38888988762 333444444
Q ss_pred ccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC
Q 006979 299 IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (623)
Q Consensus 299 ~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~ 378 (623)
..+....|+ ++.++.... +|. |..+|+.+++............ ...+.+ +++.++..+ +
T Consensus 353 --~~v~~~~~~--~~~l~s~s~-dg~--v~vwd~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~l~~~~--d 411 (464)
T 3v7d_B 353 --ALVGLLRLS--DKFLVSAAA-DGS--IRGWDANDYSRKFSYHHTNLSA---------ITTFYV---SDNILVSGS--E 411 (464)
T ss_dssp --SCEEEEEEC--SSEEEEEET-TSE--EEEEETTTCCEEEEEECTTCCC---------EEEEEE---CSSEEEEEE--T
T ss_pred --CcEEEEEEc--CCEEEEEeC-CCc--EEEEECCCCceeeeecCCCCcc---------EEEEEe---CCCEEEEec--C
Confidence 445667776 454444444 354 5566776665333222211111 122332 666554433 5
Q ss_pred CeEEEEEEeCCCCceee--cccCCcceEeeeecCCEEEEEEec
Q 006979 379 GRSYLGILDDFGHSLSL--LDIPFTDIDNITLGNDCLFVEGAS 419 (623)
Q Consensus 379 g~~~L~~~d~~~~~~~~--lt~~~~~v~~~~~~~~~~~~~~~s 419 (623)
| .|.++|+.+++... +......+..+..+++.+++.+.+
T Consensus 412 g--~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 412 N--QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp T--EEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEE
T ss_pred C--eEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEe
Confidence 5 46667887777653 333344466665567777666554
No 436
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.10 E-value=8.2e-05 Score=72.53 Aligned_cols=202 Identities=9% Similarity=-0.127 Sum_probs=111.4
Q ss_pred EEEeC-CEEEEEeCC--CCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 150 FRIFG-DTVIFSNYK--DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 150 ~~~s~-d~l~f~~~~--~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
+.+++ +.+|++... .+.|.++|++++ ...+.+.-+ ...+-. .+.++|++|+...+.. +.++++
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg-~v~~~i~l~---~~~fge--Gi~~~g~~lyv~t~~~--------~~v~vi 91 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTG-KVENIHKMD---DSYFGE--GLTLLNEKLYQVVWLK--------NIGFIY 91 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTC-CEEEEEECC---TTCCEE--EEEEETTEEEEEETTC--------SEEEEE
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCC-CEEEEEecC---CCcceE--EEEEeCCEEEEEEecC--------CEEEEE
Confidence 34455 466666533 467999999988 223333321 011112 2445577777766533 679999
Q ss_pred EcCCCCcccceecccC-CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 227 ALNGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~-~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
|+++.+. +..+..+ .+ .-..+|||++|+. + +. ...|+++|.++... ...+..+..+.-...+..
T Consensus 92 D~~t~~v--~~~i~~g~~~---g~glt~Dg~~l~v-s-~g------s~~l~viD~~t~~v--~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 92 DRRTLSN--IKNFTHQMKD---GWGLATDGKILYG-S-DG------TSILYEIDPHTFKL--IKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp ETTTTEE--EEEEECCSSS---CCEEEECSSSEEE-E-CS------SSEEEEECTTTCCE--EEEEECEETTEECCCEEE
T ss_pred ECCCCcE--EEEEECCCCC---eEEEEECCCEEEE-E-CC------CCeEEEEECCCCcE--EEEEEECCCCccccccee
Confidence 9998763 3444333 21 2347889998874 4 33 34699999877643 222222211000012346
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecc-cc-----cccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD-AE-----FSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~-~~-----~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
..|. ||++| +... ....|.++|+++++.....+.. .. ...+. ....+.+.+. ++++.+|++. ..
T Consensus 157 le~~-dg~ly-vn~~--~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~-~~v~nGIa~~---~~~~~lfVTg--k~ 226 (266)
T 2iwa_A 157 LEYI-NGEVW-ANIW--QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRD-IDVLNGIAWD---QENKRIFVTG--KL 226 (266)
T ss_dssp EEEE-TTEEE-EEET--TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTT-CCCEEEEEEE---TTTTEEEEEE--TT
T ss_pred EEEE-CCEEE-EecC--CCCeEEEEECCCCcEEEEEECCCcccccccccccc-cCceEEEEEc---CCCCEEEEEC--CC
Confidence 6777 77544 5554 2347999999999865443211 00 00000 0011334444 3778888876 45
Q ss_pred eEEEEEEeCCC
Q 006979 380 RSYLGILDDFG 390 (623)
Q Consensus 380 ~~~L~~~d~~~ 390 (623)
..+|+.+++..
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 67788877654
No 437
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.00031 Score=71.33 Aligned_cols=187 Identities=9% Similarity=-0.038 Sum_probs=107.0
Q ss_pred CCcEEEEeCCCCCCC-ceecCCCCCCCCeeecceeeCC--CCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc
Q 006979 164 DQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (623)
Q Consensus 164 ~~~l~~~d~~~g~~~-~~~Lt~~~~~~~~~~~d~~~sP--dG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~ 240 (623)
++.+..+++.++ . .+.+.... ........|+| +|++++....+ ..+.++|+.+++ ...+.
T Consensus 103 ~~~~~~~~~~~~--~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~s~d---------g~i~~wd~~~~~---~~~~~ 165 (343)
T 3lrv_A 103 GNQITILDSKTN--KVLREIEVDS---ANEIIYMYGHNEVNTEYFIWADNR---------GTIGFQSYEDDS---QYIVH 165 (343)
T ss_dssp TTEEEEEETTTC--CEEEEEECCC---SSCEEEEECCC---CCEEEEEETT---------CCEEEEESSSSC---EEEEE
T ss_pred cCceEEeecCCc--ceeEEeecCC---CCCEEEEEcCCCCCCCEEEEEeCC---------CcEEEEECCCCc---EEEEE
Confidence 345666676655 3 23333210 23456788999 99988766554 458889998886 33322
Q ss_pred -c-CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcC-CCCCccccCcCceeCCCCcEEEE
Q 006979 241 -S-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FDPTIVESPTEPKWSSKGELFFV 317 (623)
Q Consensus 241 -~-~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ws~DG~l~~~ 317 (623)
. ....+...+|+|||+.|+....+ ..|.++|+..+.. ....+.. .. ..+....|+|||++++.
T Consensus 166 ~~~~~~~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~~~~--~~~~~~~~h~----~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDSLLLALYSPD--------GILDVYNLSSPDQ--ASSRFPVDEE----AKIKEVKFADNGYWMVV 231 (343)
T ss_dssp CCCSSCCCCEEEECTTSCEEEEECTT--------SCEEEEESSCTTS--CCEECCCCTT----SCEEEEEECTTSSEEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCC--------CEEEEEECCCCCC--CccEEeccCC----CCEEEEEEeCCCCEEEE
Confidence 2 22235667899999987755423 2388889987742 1133443 33 56778999999985555
Q ss_pred EeCCCCeeeEEEEecCCCeEE-EEee---cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 318 TDRKNGFWNLHKWIESNNEVL-AIYS---LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 318 ~~~~~g~~~L~~~d~~~~~~~-~l~~---~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
... + .|..+|+.+++.. .+.. ....+.. ..+.|. |+++.|+..+..++.-+||.++...+.+
T Consensus 232 ~~~--~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~g~~l~~~s~~d~~i~v~~~~~~~~~~ 297 (343)
T 3lrv_A 232 ECD--Q--TVVCFDLRKDVGTLAYPTYTIPEFKTGT-------VTYDID---DSGKNMIAYSNESNSLTIYKFDKKTKNW 297 (343)
T ss_dssp EES--S--BEEEEETTSSTTCBSSCCCBC-----CC-------EEEEEC---TTSSEEEEEETTTTEEEEEEECTTTCSE
T ss_pred EeC--C--eEEEEEcCCCCcceeecccccccccccc-------eEEEEC---CCCCEEEEecCCCCcEEEEEEcccccce
Confidence 444 3 6777787665421 1111 1011111 123333 3777666554437777888776555555
Q ss_pred ee
Q 006979 394 SL 395 (623)
Q Consensus 394 ~~ 395 (623)
..
T Consensus 298 ~~ 299 (343)
T 3lrv_A 298 TK 299 (343)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 438
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=98.09 E-value=1.2e-05 Score=78.99 Aligned_cols=98 Identities=10% Similarity=-0.067 Sum_probs=62.1
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHH-HHHHhCCCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCA-TFLVGSGKAD 572 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~-~~l~~~~~~d 572 (623)
..|.||++||++... ..|..... + ..+|.|+.+|+||.+. +.. .....+++.+.+ +.+.... .
T Consensus 20 ~~~~lv~lhg~~~~~--~~~~~~~~-l-~~~~~v~~~d~~G~~~-~~~---------~~~~~~~~~~~~~~~i~~~~--~ 83 (265)
T 3ils_A 20 ARKTLFMLPDGGGSA--FSYASLPR-L-KSDTAVVGLNCPYARD-PEN---------MNCTHGAMIESFCNEIRRRQ--P 83 (265)
T ss_dssp SSEEEEEECCTTCCG--GGGTTSCC-C-SSSEEEEEEECTTTTC-GGG---------CCCCHHHHHHHHHHHHHHHC--S
T ss_pred CCCEEEEECCCCCCH--HHHHHHHh-c-CCCCEEEEEECCCCCC-CCC---------CCCCHHHHHHHHHHHHHHhC--C
Confidence 346788899985433 34555555 4 6789999999999421 110 112233333222 2222221 1
Q ss_pred CCceEEEEcChHHHHHHHHh----cCCCceeEEEecccC
Q 006979 573 EKRLCITGGSAGGYTTLAAL----AFRDTFKAGASLYGV 607 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~----~~~~~f~a~v~~~g~ 607 (623)
.+++.++|||+||.+++.++ .+++.++..|...+.
T Consensus 84 ~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~ 122 (265)
T 3ils_A 84 RGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAP 122 (265)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCC
Confidence 35899999999999999877 357778888877553
No 439
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.08 E-value=0.00013 Score=70.30 Aligned_cols=200 Identities=11% Similarity=-0.035 Sum_probs=112.1
Q ss_pred EEeCCEEEEEeCCCC--cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 151 RIFGDTVIFSNYKDQ--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 151 ~~s~d~l~f~~~~~~--~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
.++++.+|++...++ .|.++|++++ ...+.+.-. . ++..-.+.++|++|+...+.. +.++++|+
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~Tg-kv~~~~~l~----~-~~FgeGit~~g~~ly~ltw~~--------~~v~v~D~ 114 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIESG-KTLQQIELG----K-RYFGEGISDWKDKIVGLTWKN--------GLGFVWNI 114 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTTC-CEEEEEECC----T-TCCEEEEEEETTEEEEEESSS--------SEEEEEET
T ss_pred EEECCEEEEECCCCCCceEEEEECCCC-cEEEEEecC----C-ccceeEEEEeCCEEEEEEeeC--------CEEEEEEC
Confidence 345667888776554 6999999988 223333321 1 111122556788887776533 78999999
Q ss_pred CCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 229 ~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
++.+. +..+.-+.+ +-..++||++|+ ++ +. ..+|+++|.++...+....+..+.. -...+....|
T Consensus 115 ~t~~~--~~ti~~~~e---G~glt~dg~~L~-~S-dG------s~~i~~iDp~T~~v~~~I~V~~~g~--~~~~lNELe~ 179 (262)
T 3nol_A 115 RNLRQ--VRSFNYDGE---GWGLTHNDQYLI-MS-DG------TPVLRFLDPESLTPVRTITVTAHGE--ELPELNELEW 179 (262)
T ss_dssp TTCCE--EEEEECSSC---CCCEEECSSCEE-EC-CS------SSEEEEECTTTCSEEEEEECEETTE--ECCCEEEEEE
T ss_pred ccCcE--EEEEECCCC---ceEEecCCCEEE-EE-CC------CCeEEEEcCCCCeEEEEEEeccCCc--cccccceeEE
Confidence 98763 334433321 234678998775 44 33 2459999988764322222111111 0022334678
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccc---cc-cccccccCcceeEEeecCCCCEEEEEEEECCeEEEE
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAE---FS-RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~---~~-~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~ 384 (623)
. ||++| +... ....|.++|+.+++.........- .. ...-....+.+++.+ +++.||++. ..+..||
T Consensus 180 ~-~G~ly-an~w--~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp---~~~~lfVTG--K~Wp~~~ 250 (262)
T 3nol_A 180 V-DGEIF-ANVW--QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK---EHHRLFVTG--KLWPKVF 250 (262)
T ss_dssp E-TTEEE-EEET--TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET---TTTEEEEEE--TTCSEEE
T ss_pred E-CCEEE-EEEc--cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC---CCCEEEEEC--CCCCceE
Confidence 6 78655 5554 234799999999986654432110 00 000001124455543 778888876 5677788
Q ss_pred EEeC
Q 006979 385 ILDD 388 (623)
Q Consensus 385 ~~d~ 388 (623)
.+.+
T Consensus 251 ev~~ 254 (262)
T 3nol_A 251 EITL 254 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
No 440
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.08 E-value=6.6e-05 Score=73.21 Aligned_cols=201 Identities=9% Similarity=0.009 Sum_probs=116.9
Q ss_pred cCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcEEEE
Q 006979 91 LGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKH 170 (623)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l~~~ 170 (623)
..++.++|++++|-.... .+...|...+..+| +...-++-+ . .+.+..+++.++.++.....++.++++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~---~~~s~v~~iD~~tg-~v~~~i~l~--~-----~~fgeGi~~~g~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGL---YGRSSVRQVALQTG-KVENIHKMD--D-----SYFGEGLTLLNEKLYQVVWLKNIGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECS---TTTCEEEEEETTTC-CEEEEEECC--T-----TCCEEEEEEETTEEEEEETTCSEEEEE
T ss_pred cccEEEeCCCeEEEECCC---CCCCEEEEEECCCC-CEEEEEecC--C-----CcceEEEEEeCCEEEEEEecCCEEEEE
Confidence 467888864566655433 24445777777654 332222111 0 111234677788999999888999999
Q ss_pred eCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc--cCCC---c
Q 006979 171 SIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV--SGSD---F 245 (623)
Q Consensus 171 d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~--~~~~---~ 245 (623)
|.++. .....+..+ .+ ....+++||++++. +. . . +.|+++|+++.+. ++.+. .... +
T Consensus 92 D~~t~-~v~~~i~~g--~~----~g~glt~Dg~~l~v-s~-g-s------~~l~viD~~t~~v--~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 92 DRRTL-SNIKNFTHQ--MK----DGWGLATDGKILYG-SD-G-T------SILYEIDPHTFKL--IKKHNVKYNGHRVIR 153 (266)
T ss_dssp ETTTT-EEEEEEECC--SS----SCCEEEECSSSEEE-EC-S-S------SEEEEECTTTCCE--EEEEECEETTEECCC
T ss_pred ECCCC-cEEEEEECC--CC----CeEEEEECCCEEEE-EC-C-C------CeEEEEECCCCcE--EEEEEECCCCccccc
Confidence 99875 223344321 01 11337789988764 43 2 1 6799999998763 23332 2111 2
Q ss_pred ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEE-cCC--------CCCccccCcCceeCCCCcEEE
Q 006979 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AGF--------DPTIVESPTEPKWSSKGELFF 316 (623)
Q Consensus 246 ~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~ws~DG~l~~ 316 (623)
.+..+|. || +|+...|. ..+|.++|.+++.. ..++. .+. .+. ...+...+|+||++.+|
T Consensus 154 ~nele~~-dg-~lyvn~~~-------~~~V~vID~~tg~V--~~~I~~~g~~~~~~~~~~~~-~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 154 LNELEYI-NG-EVWANIWQ-------TDCIARISAKDGTL--LGWILLPNLRKKLIDEGFRD-IDVLNGIAWDQENKRIF 221 (266)
T ss_dssp EEEEEEE-TT-EEEEEETT-------SSEEEEEETTTCCE--EEEEECHHHHHHHHHTTCTT-CCCEEEEEEETTTTEEE
T ss_pred ceeEEEE-CC-EEEEecCC-------CCeEEEEECCCCcE--EEEEECCCcccccccccccc-cCceEEEEEcCCCCEEE
Confidence 3345677 77 56544432 34699999988743 12222 111 000 02346789999999777
Q ss_pred EEeCCCCeeeEEEEecCC
Q 006979 317 VTDRKNGFWNLHKWIESN 334 (623)
Q Consensus 317 ~~~~~~g~~~L~~~d~~~ 334 (623)
++.. .+..|+.+++..
T Consensus 222 VTgk--~~~~v~~i~l~~ 237 (266)
T 2iwa_A 222 VTGK--LWPKLFEIKLHL 237 (266)
T ss_dssp EEET--TCSEEEEEEEEE
T ss_pred EECC--CCCeEEEEEEec
Confidence 7775 566788877643
No 441
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.08 E-value=0.0011 Score=65.04 Aligned_cols=272 Identities=10% Similarity=0.055 Sum_probs=138.0
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCccc-CCCCCccceeeeecCCceEEEeCC-EEEEEeCCCCc
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDI-TPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l-~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~~ 166 (623)
..+..+.+++++.+|+.... .+ .|.+++.. + +.... ++... ......+.+++ .+++.....+.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~---~~--~v~~~~~~-~-~~~~~~~~~~~--------~~~~~i~~~~~g~l~v~~~~~~~ 84 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHK---AN--KISSLDQS-G-RIKEFEVPTPD--------AKVMCLIVSSLGDIWFTENGANK 84 (300)
T ss_dssp CCEEEEEECTTSCEEEEETT---TT--EEEEECTT-S-CEEEEECSSTT--------CCEEEEEECTTSCEEEEETTTTE
T ss_pred CCcceeeECCCCCEEEEcCC---CC--eEEEECCC-C-ceEEEECCCCC--------CcceeEEECCCCCEEEEecCCCe
Confidence 35567777776667766532 13 35556554 2 33221 22110 01223444443 67777666678
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceec--ccCCC
Q 006979 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL--VSGSD 244 (623)
Q Consensus 167 l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l--~~~~~ 244 (623)
|+++|.+ + ..+.+... ..........++|+|+.++ ..... ..|+++|.+ ++ ...+ .....
T Consensus 85 v~~~d~~-g--~~~~~~~~--~~~~~~~~i~~~~~g~l~v-~~~~~--------~~i~~~~~~-g~---~~~~~~~~~~~ 146 (300)
T 2qc5_A 85 IGKLSKK-G--GFTEYPLP--QPDSGPYGITEGLNGDIWF-TQLNG--------DRIGKLTAD-GT---IYEYDLPNKGS 146 (300)
T ss_dssp EEEECTT-S--CEEEEECS--STTCCEEEEEECSTTCEEE-EETTT--------TEEEEECTT-SC---EEEEECSSTTC
T ss_pred EEEECCC-C--CeEEecCC--CCCCCCccceECCCCCEEE-EccCC--------CeEEEECCC-CC---EEEccCCCCCC
Confidence 9999987 5 34433221 0123345677889997443 32211 569999988 55 3332 22223
Q ss_pred cccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCe
Q 006979 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 324 (623)
Q Consensus 245 ~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~ 324 (623)
......++|||+ |++.... ...|++++.+ + . ......... . ..+....++++|++++.... .
T Consensus 147 ~~~~i~~d~~g~-l~v~~~~-------~~~i~~~~~~-g-~--~~~~~~~~~-~--~~~~~i~~d~~g~l~v~~~~---~ 208 (300)
T 2qc5_A 147 YPAFITLGSDNA-LWFTENQ-------NNSIGRITNT-G-K--LEEYPLPTN-A--AAPVGITSGNDGALWFVEIM---G 208 (300)
T ss_dssp CEEEEEECTTSS-EEEEETT-------TTEEEEECTT-C-C--EEEEECSST-T--CCEEEEEECTTSSEEEEETT---T
T ss_pred CceeEEECCCCC-EEEEecC-------CCeEEEECCC-C-c--EEEeeCCCC-C--CCcceEEECCCCCEEEEccC---C
Confidence 344567899998 6555421 3458888873 3 1 222221111 1 34556778888876654432 3
Q ss_pred eeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccC--Ccc
Q 006979 325 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP--FTD 402 (623)
Q Consensus 325 ~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~--~~~ 402 (623)
..|+++|+ +++...+... .....+ ..+.+. ++ +.++++. .+...|+++|.+ ++.+.+..+ ...
T Consensus 209 ~~i~~~~~-~g~~~~~~~~-~~~~~~------~~i~~d---~~-g~l~v~~--~~~~~i~~~~~~-g~~~~~~~~~~~~~ 273 (300)
T 2qc5_A 209 NKIGRITT-TGEISEYDIP-TPNARP------HAITAG---KN-SEIWFTE--WGANQIGRITND-NTIQEYQLQTENAE 273 (300)
T ss_dssp TEEEEECT-TCCEEEEECS-STTCCE------EEEEEC---ST-TCEEEEE--TTTTEEEEECTT-SCEEEEECCSTTCC
T ss_pred CEEEEEcC-CCcEEEEECC-CCCCCc------eEEEEC---CC-CCEEEec--cCCCeEEEECCC-CcEEEEECCccCCc
Confidence 36888988 4554443211 011111 122332 24 3466655 234568888884 555544332 122
Q ss_pred eEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 403 IDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 403 v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
...+ +++ +.+++.. . . .|++++++
T Consensus 274 ~~~i~~~~~-g~l~v~~-~---~-~i~~~~p~ 299 (300)
T 2qc5_A 274 PHGITFGKD-GSVWFAL-K---C-KIGKLNLN 299 (300)
T ss_dssp CCCEEECTT-SCEEEEC-S---S-EEEEEEEC
T ss_pred cceeEeCCC-CCEEEEc-c---C-ceEEeCCC
Confidence 3333 333 4455432 2 2 67777653
No 442
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.07 E-value=0.00011 Score=73.90 Aligned_cols=138 Identities=7% Similarity=-0.065 Sum_probs=78.9
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCc---eecCCCCCCCCeeecceeeCC--CCCEEEEEEeccCCCCCCce
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~---~~Lt~~~~~~~~~~~d~~~sP--dG~~l~~v~~~~~~~~~~~~ 220 (623)
+.+.+++++ ..+++...|+.|.++|+.++ .. ..+... ...+....|+| +|+.|+....|
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~--~~~~~~~l~gH----~~~V~~v~~~~~~~~~~l~s~s~D--------- 80 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNG--GQILIADLRGH----EGPVWQVAWAHPMYGNILASCSYD--------- 80 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETT--EEEEEEEEECC----SSCEEEEEECCGGGSSCEEEEETT---------
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCC--CcEEEEEEcCC----CccEEEEEeCCCCCCCEEEEEECC---------
Confidence 334455544 45666667888888988754 22 223321 23466778986 47777665544
Q ss_pred eEEEEEEcCCCCcccceecccCCCcccceeeCCC--CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCC
Q 006979 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 298 (623)
Q Consensus 221 ~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPD--G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~ 298 (623)
..+.+.|+.++.......+......+...+|+|| |+.|+-...|. .|.+.++..++.......+.+..
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~~~~~~~~~~~~~~h~-- 150 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYTGEGQWEVKKINNAHT-- 150 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEECSSSCEEECCBTTSSS--
T ss_pred CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecCCCCCcceeeeecccc--
Confidence 3477778877642112333333445667889998 77777554332 27777877653211111222222
Q ss_pred ccccCcCceeCCC
Q 006979 299 IVESPTEPKWSSK 311 (623)
Q Consensus 299 ~~~~~~~~~ws~D 311 (623)
..+....|+|+
T Consensus 151 --~~v~~~~~~~~ 161 (316)
T 3bg1_A 151 --IGCNAVSWAPA 161 (316)
T ss_dssp --SCBCCCEECCC
T ss_pred --CCcceEEEccc
Confidence 45667889987
No 443
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.07 E-value=0.00074 Score=67.47 Aligned_cols=223 Identities=8% Similarity=0.029 Sum_probs=114.3
Q ss_pred EEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 150 FRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 150 ~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
.+++++ .+++++...++|+++|.+++ ..+.+.. ..+.....++|+|+ |++...... ...|+++|.
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g~--~~~~~~~-----~~~p~gia~~~dG~-l~vad~~~~------~~~v~~~d~ 102 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATV-----EGKVSGLAFTSNGD-LVATGWNAD------SIPVVSLVK 102 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCC--EEEEEEC-----SSEEEEEEECTTSC-EEEEEECTT------SCEEEEEEC
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCCc--eEEEEeC-----CCCceeEEEcCCCc-EEEEeccCC------cceEEEEcC
Confidence 455444 68888877888999998754 3333332 23455678999998 433332111 146889998
Q ss_pred CCCCcccceeccc--CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcC-----CCCCccc
Q 006979 229 NGQNIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-----FDPTIVE 301 (623)
Q Consensus 229 ~~g~~~~~~~l~~--~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~-----~~~~~~~ 301 (623)
.+++ ++.+.. ...+...+...+++ .+++.. . ....||++|..++.. ......+ ....-..
T Consensus 103 ~~g~---~~~~~~~~~~~~~~g~~~~~~~-~~~v~d--~-----~~g~i~~~d~~~~~~--~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 103 SDGT---VETLLTLPDAIFLNGITPLSDT-QYLTAD--S-----YRGAIWLIDVVQPSG--SIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp TTSC---EEEEEECTTCSCEEEEEESSSS-EEEEEE--T-----TTTEEEEEETTTTEE--EEEEECGGGSCSSTTCCSC
T ss_pred CCCe---EEEEEeCCCccccCcccccCCC-cEEEEE--C-----CCCeEEEEeCCCCcE--eEEEECCccccccccCCCC
Confidence 8887 444432 22344445555554 455443 2 134699999765410 1111110 0000001
Q ss_pred cCcCceeCCCCcEEEEEeCCCCeeeEEEEecCC-CeE--EEEeecccccccccccccCcceeEEeecCCCCEEEEEEEEC
Q 006979 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NEV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (623)
Q Consensus 302 ~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~-~~~--~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~ 378 (623)
....+ ++||+.+|+++. +..+|++++.++ ++. ..+... .. ..+.+.+.+ +| .+|++..
T Consensus 170 ~pngi--s~dg~~lyv~d~--~~~~I~~~~~~~~g~~~~~~~~~~---~~------~P~gi~vd~---dG-~l~va~~-- 230 (306)
T 2p4o_A 170 AANGL--KRFGNFLYVSNT--EKMLLLRIPVDSTDKPGEPEIFVE---QT------NIDDFAFDV---EG-NLYGATH-- 230 (306)
T ss_dssp SEEEE--EEETTEEEEEET--TTTEEEEEEBCTTSCBCCCEEEEE---SC------CCSSEEEBT---TC-CEEEECB--
T ss_pred cCCCc--CcCCCEEEEEeC--CCCEEEEEEeCCCCCCCccEEEec---cC------CCCCeEECC---CC-CEEEEeC--
Confidence 12223 788886666765 445788888764 331 111111 01 123444431 44 5655543
Q ss_pred CeEEEEEEeCCCCcee--ecccCCcceEee--e---ecCCEEEEEEe
Q 006979 379 GRSYLGILDDFGHSLS--LLDIPFTDIDNI--T---LGNDCLFVEGA 418 (623)
Q Consensus 379 g~~~L~~~d~~~~~~~--~lt~~~~~v~~~--~---~~~~~~~~~~~ 418 (623)
+..+|++++.++.... .+..+......+ . ++++++|+...
T Consensus 231 ~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 231 IYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 3346888998743322 233332223333 3 46677777664
No 444
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.06 E-value=0.00096 Score=68.79 Aligned_cols=290 Identities=10% Similarity=0.017 Sum_probs=144.3
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.|+| +..++ .-. .+|...+|..... +....+.. |...+.+.+++++ ..+++...++
T Consensus 66 ~~~V~~~~~sp~~~~l~-s~s---~D~~v~iWd~~~~---~~~~~~~~--------h~~~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIV-SAS---QDGRLIVWNALTS---QKTHAIKL--------HCPWVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp SSCEEEEEECTTSSCEE-EEE---TTSEEEEEETTTT---EEEEEEEC--------CCTTCCCCEECTTSSEEEECCSSS
T ss_pred ccEEEEEEEcCCCCEEE-EEe---CCCeEEEEECCCC---ccceEEec--------CCCCEEEEEECCCCCEEEEeeCCC
Confidence 44567888998 55443 332 2477777754322 21111110 1112334455555 4556666777
Q ss_pred cEEEEeCCCCCC------CceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceec
Q 006979 166 RLYKHSIDSKDS------SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL 239 (623)
Q Consensus 166 ~l~~~d~~~g~~------~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l 239 (623)
.+.++++.+... ..+.++.. ........|+|++...+++.... ..+.++|+.+++. ...+
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh----~~~v~~~~~~~~~~~~l~s~s~D--------~~i~~wd~~~~~~--~~~~ 196 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGH----KGYASSCQYVPDQETRLITGSGD--------QTCVLWDVTTGQR--ISIF 196 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCC----SSCCCCCBCCSSSSSCEEEECTT--------SCEEEECTTTCCE--EEEE
T ss_pred cEEEEECCCCccccCCccceeeccCC----CcceEEEEEecCCCCEEEEECCC--------CcEEEEEcCCCcE--EEEe
Confidence 788888764300 01122221 22345567888754433333322 4588889988762 2222
Q ss_pred c----cC-CCcccceeeCC-CCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc
Q 006979 240 V----SG-SDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (623)
Q Consensus 240 ~----~~-~~~~~~p~wSP-DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~ 313 (623)
. .+ ...+....|+| |++.|+-...|. .|.+.|+...+. ....+.+.. ..+....|+|||+
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~~~~~~--~~~~~~~h~----~~v~~v~~~p~~~ 262 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDLRITSR--AVRTYHGHE----GDINSVKFFPDGQ 262 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEETTTTCC--CCEEECCCS----SCCCEEEECTTSS
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEECCCCCc--ceEEECCcC----CCeEEEEEecCCC
Confidence 1 11 12234456766 788776555332 378888864321 334455554 5678899999998
Q ss_pred EEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCce
Q 006979 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~ 393 (623)
+++.... ++. |..+|+.+++............. .-........|. |+++.++ +...+|. |+++|...++.
T Consensus 263 ~l~s~s~-D~~--i~lwd~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s---~~g~~l~-~g~~dg~--i~vwd~~~~~~ 332 (380)
T 3iz6_a 263 RFGTGSD-DGT--CRLFDMRTGHQLQVYNREPDRND-NELPIVTSVAFS---ISGRLLF-AGYSNGD--CYVWDTLLAEM 332 (380)
T ss_dssp EEEEECS-SSC--EEEEETTTTEEEEEECCCCSSSC-CSSCSCSEEEEC---SSSSEEE-EECTTSC--EEEEETTTCCE
T ss_pred eEEEEcC-CCe--EEEEECCCCcEEEEecccccccc-cccCceEEEEEC---CCCCEEE-EEECCCC--EEEEECCCCce
Confidence 5555444 354 55567777765444322111000 000111233443 2666554 4444554 55567665554
Q ss_pred e-ecc----cCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 006979 394 S-LLD----IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (623)
Q Consensus 394 ~-~lt----~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~ 434 (623)
. .+. .....+..+ ++++..+ ++++.. ..|...++.++
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l-~sgs~D---~~i~iW~~~~~ 376 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSAL-CTGSWD---KNLKIWAFSGH 376 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEE-EEECTT---SCEEEEECCSS
T ss_pred EEEEecccCCCCCceEEEEECCCCCEE-EEeeCC---CCEEEEecCCC
Confidence 3 331 122234444 5666643 344322 34555565544
No 445
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.06 E-value=6.6e-05 Score=76.54 Aligned_cols=155 Identities=15% Similarity=0.100 Sum_probs=96.9
Q ss_pred EEEEEeCCC--C--cEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEecc--CC------C--CCCcee
Q 006979 156 TVIFSNYKD--Q--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR--RQ------D--ALNSTT 221 (623)
Q Consensus 156 ~l~f~~~~~--~--~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~--~~------~--~~~~~~ 221 (623)
.+++++-.. + .||.++.+++ ..+.+..-.+.+..+.+|..++|+|++++ ..++ .. + ......
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G~fyv--t~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPEHFYA--TNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETTEEEE--EESCSCSSHHHHHHHHHTTCCCE
T ss_pred EEEEEECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCCCEEe--cCCcEeCCcccccchhhccCCcc
Confidence 466665442 2 3777877644 33333322223456778999999997433 3221 10 0 012347
Q ss_pred EEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccc
Q 006979 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~ 301 (623)
.||++|.. + ++.+..+-.+.++.+|||||++|++.... ..+|++++++..+.+...+.+ ... .
T Consensus 204 ~vyr~d~~--~---~~~~~~~l~~pNGia~spDg~~lYvadt~-------~~~I~~~~~~~~g~l~~~~~~-~~~----g 266 (355)
T 3sre_A 204 FVTYYSPN--D---VRVVAEGFDFANGINISPDGKYVYIAELL-------AHKIHVYEKHANWTLTPLRVL-SFD----T 266 (355)
T ss_dssp EEEEECTT--C---CEEEEEEESSEEEEEECTTSSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEE-ECS----S
T ss_pred EEEEEECC--e---EEEeecCCcccCcceECCCCCEEEEEeCC-------CCeEEEEEECCCCcEecCEEE-eCC----C
Confidence 89999873 4 66677777778899999999999988643 346999999866555555555 223 4
Q ss_pred cCcCceeCC-CCcEEEEEeCCCCeeeEEEEecC
Q 006979 302 SPTEPKWSS-KGELFFVTDRKNGFWNLHKWIES 333 (623)
Q Consensus 302 ~~~~~~ws~-DG~l~~~~~~~~g~~~L~~~d~~ 333 (623)
.+..+...+ +|.++..... +..++.+++++
T Consensus 267 ~PDGi~vD~e~G~lwva~~~--~g~~v~~~~P~ 297 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHP--NGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEECTTTCCEEEEEES--CHHHHHSCCTT
T ss_pred CCceEEEeCCCCcEEEEecC--CceEEEEECCC
Confidence 566788888 5876654554 33445566665
No 446
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.04 E-value=1.5e-05 Score=83.35 Aligned_cols=108 Identities=9% Similarity=-0.020 Sum_probs=65.2
Q ss_pred CCEEEEecCCCCCc------ccCcCC----HHhHHHHcCceEEEEECCCCCCCCchhHH------HhhccCCccch----
Q 006979 495 PPLLVKSHGGPTSE------ARGILN----LSIQYWTSRGWAFVDVNYGGSTGYGREFR------ERLLGRWGIVD---- 554 (623)
Q Consensus 495 ~Pliv~~hGg~~~~------~~~~~~----~~~~~~a~~G~~v~~~d~rGs~~~g~~~~------~~~~~~~g~~~---- 554 (623)
.|.||++||..... ....|. ..++.|+++||.|+++|++|.|.....-. +...+..+...
T Consensus 52 ~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~~ 131 (431)
T 2hih_A 52 KDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEKY 131 (431)
T ss_dssp SSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHHH
T ss_pred CCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccccC
Confidence 35588899985431 122332 47888899999999999999554321100 00011111000
Q ss_pred -----HHHHHHHHHHHHhCCCCC-CCceEEEEcChHHHHHHHHh-c--------------------------CCCceeEE
Q 006979 555 -----VNDCCSCATFLVGSGKAD-EKRLCITGGSAGGYTTLAAL-A--------------------------FRDTFKAG 601 (623)
Q Consensus 555 -----~~D~~~~~~~l~~~~~~d-~~rv~i~G~S~GG~~~~~~~-~--------------------------~~~~f~a~ 601 (623)
.+|+.+ ++++ .. .+++.|+||||||.+++.++ . +|++++.+
T Consensus 132 ~~~~~a~dl~~----ll~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~sl 205 (431)
T 2hih_A 132 GHERYGKTYEG----VLKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSI 205 (431)
T ss_dssp TCCSEEEEECC----SCTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEE
T ss_pred CHHHHHHHHHH----HHHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEE
Confidence 001111 1111 12 37999999999999999876 4 58899999
Q ss_pred EecccCC
Q 006979 602 ASLYGVS 608 (623)
Q Consensus 602 v~~~g~~ 608 (623)
|.+.++.
T Consensus 206 v~i~tP~ 212 (431)
T 2hih_A 206 TTIATPH 212 (431)
T ss_dssp EEESCCT
T ss_pred EEECCCC
Confidence 9998764
No 447
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.04 E-value=6e-05 Score=85.74 Aligned_cols=199 Identities=9% Similarity=0.018 Sum_probs=111.4
Q ss_pred EEEeCC-EEEEEeCCCCcEEEEeCCCCC-CCceecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEEEE
Q 006979 150 FRIFGD-TVIFSNYKDQRLYKHSIDSKD-SSPLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 150 ~~~s~d-~l~f~~~~~~~l~~~d~~~g~-~~~~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
.+++++ ..+++...++.|.++++.++. .....+... ........|+|+ |+.|+....+ +.|.+
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h----~~~V~~l~~s~~~~~~~l~s~s~D---------g~I~v 81 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVLI 81 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC----SSCEEEEEECCTTSCSEEEEEETT---------SCEEE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC----cCceEEEEecCCCCCCEEEEEeCC---------CeEEE
Confidence 333433 345555567888888886430 112223321 334667889988 8888776654 45788
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCC--CCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPD--G~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
+|+.++.......+......+....|+|| |+.|+....+ ..|.++|+..+... ....+.+.. ..+
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~~~~-~~~~~~~~~----~~v 148 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTT-SPIIIDAHA----IGV 148 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECCSSSCC-CCEEEECCS----SCE
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC--------CcEEEEEeecCCCc-ceeEeecCC----Cce
Confidence 88887742113334444455667889999 9988877533 34888898776321 222334433 456
Q ss_pred cCceeCC-------------CCcEEEEEeCCCCeeeEEEEecCCCeEEEEe---ecccccccccccccCcceeEEeecCC
Q 006979 304 TEPKWSS-------------KGELFFVTDRKNGFWNLHKWIESNNEVLAIY---SLDAEFSRPLWVFGINSYEIIQSHGE 367 (623)
Q Consensus 304 ~~~~ws~-------------DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~---~~~~~~~~~~w~~~~~~~~~l~~s~~ 367 (623)
....|+| ||++++.... +|.-++|.+.........+. .....+....|.+ +
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp------------~ 215 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP------------T 215 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEET-TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC------------C
T ss_pred EEEEecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc------------C
Confidence 7888998 5774444444 46555554433222222222 1222233333332 5
Q ss_pred C--CEEEEEEEECCeEEEEEEe
Q 006979 368 K--NLIACSYRQNGRSYLGILD 387 (623)
Q Consensus 368 ~--~~l~~~~~~~g~~~L~~~d 387 (623)
+ +.++++...+|.-++|-++
T Consensus 216 ~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 216 VLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp CSSSEEEEEEESSSCEEEEEES
T ss_pred CCCCCEEEEEecCCEEEEecCC
Confidence 3 5666667677776666554
No 448
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.02 E-value=0.00015 Score=74.29 Aligned_cols=156 Identities=13% Similarity=0.108 Sum_probs=94.4
Q ss_pred EEEeCCEEEEE-eCCCCcEEEEeCCCCCCC-----------------ceecCCCCCCCCeeecceeeCCCCCEEEEEEec
Q 006979 150 FRIFGDTVIFS-NYKDQRLYKHSIDSKDSS-----------------PLPITPDYGEPLVSYADGIFDPRFNRYVTVRED 211 (623)
Q Consensus 150 ~~~s~d~l~f~-~~~~~~l~~~d~~~g~~~-----------------~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~ 211 (623)
.+++...+++. ...++.|.++|+.++ . ...+... .......+|+|||++|+....+
T Consensus 143 ~~~s~~~la~~sg~~~g~v~iwd~~~~--~~~~~~~~~~~~~~~~p~~~~~~~h----~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 143 CEFSNGLLVYSNEFNLGQIHITKLQSS--GSATTQDQGVQQKAILGKGVLIKAH----TNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp EEEETTEEEEEESSCTTCEEEEECCC--------------------CCEEECCC----SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEccEEEEeCCCcCcEEEEEECCCC--CccccccccccccccCcccEEEEcc----CCceEEEEECCCCCEEEEEeCC
Confidence 34445667776 567788999999865 2 2333322 3446678899999988776654
Q ss_pred cCCCCCCceeE-EEEEEcCCCCcccceeccc--CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceee
Q 006979 212 RRQDALNSTTE-IVAIALNGQNIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK 288 (623)
Q Consensus 212 ~~~~~~~~~~~-L~~idl~~g~~~~~~~l~~--~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~ 288 (623)
.. +.+.|+.+++. +..+.. ....+...+|||||++|+....| ..|.+.|+..+.. ..
T Consensus 217 ---------~~~v~iwd~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d--------~~v~iw~~~~~~~-~~ 276 (355)
T 3vu4_A 217 ---------GTIIRVFKTEDGVL--VREFRRGLDRADVVDMKWSTDGSKLAVVSDK--------WTLHVFEIFNDQD-NK 276 (355)
T ss_dssp ---------CSEEEEEETTTCCE--EEEEECTTCCSCEEEEEECTTSCEEEEEETT--------CEEEEEESSCCSC-CC
T ss_pred ---------CCEEEEEECCCCcE--EEEEEcCCCCCcEEEEEECCCCCEEEEEECC--------CEEEEEEccCCCC-cc
Confidence 44 88889988762 344442 33456678899999998877633 2477888765421 01
Q ss_pred eEEEcC-----C-CCCc-----------cccCcCceeCCCCcEEEEEeCCCCeeeEEEEec
Q 006979 289 RVCVAG-----F-DPTI-----------VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (623)
Q Consensus 289 ~~~~~~-----~-~~~~-----------~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~ 332 (623)
...+.. . ...| .......+|++||+.+++... +|.+++|.+..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~-dg~~~~~~~~~ 336 (355)
T 3vu4_A 277 RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPH-TRMIETFKVVF 336 (355)
T ss_dssp SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETT-TTEEEEEEEEE
T ss_pred cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeC-CCeEEEEEEEc
Confidence 111100 0 0000 011245789999985555554 57777776654
No 449
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.01 E-value=2e-05 Score=81.28 Aligned_cols=100 Identities=13% Similarity=0.080 Sum_probs=62.1
Q ss_pred CEEEEecCCCCCccc-----CcCC----HHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHH--
Q 006979 496 PLLVKSHGGPTSEAR-----GILN----LSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATF-- 564 (623)
Q Consensus 496 Pliv~~hGg~~~~~~-----~~~~----~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~-- 564 (623)
|.||++||....... ..|. ..++.|+++||.|+.+|++|.| ..... .+++...++.
T Consensus 7 ~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G---~s~~~----------a~~l~~~i~~~~ 73 (387)
T 2dsn_A 7 APIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS---SNWDR----------ACEAYAQLVGGT 73 (387)
T ss_dssp CCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSB---CHHHH----------HHHHHHHHHCEE
T ss_pred CcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCC---Ccccc----------HHHHHHHHHhhh
Confidence 447889998543221 1233 3448899999999999999854 32211 1111111110
Q ss_pred ------HHh-----------CCC----CCCCceEEEEcChHHHHHHHHhc--------------------CC------Cc
Q 006979 565 ------LVG-----------SGK----ADEKRLCITGGSAGGYTTLAALA--------------------FR------DT 597 (623)
Q Consensus 565 ------l~~-----------~~~----~d~~rv~i~G~S~GG~~~~~~~~--------------------~~------~~ 597 (623)
+.+ ... ...++|.++||||||.++..++. +| ++
T Consensus 74 vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~ 153 (387)
T 2dsn_A 74 VDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHF 153 (387)
T ss_dssp EECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCC
T ss_pred hhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccc
Confidence 100 001 23479999999999999998884 25 68
Q ss_pred eeEEEecccCC
Q 006979 598 FKAGASLYGVS 608 (623)
Q Consensus 598 f~a~v~~~g~~ 608 (623)
++.+|.+++..
T Consensus 154 V~sLV~i~tP~ 164 (387)
T 2dsn_A 154 VLSVTTIATPH 164 (387)
T ss_dssp EEEEEEESCCT
T ss_pred eeEEEEECCCC
Confidence 89999887753
No 450
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.00 E-value=0.00014 Score=70.10 Aligned_cols=199 Identities=10% Similarity=0.041 Sum_probs=115.4
Q ss_pred CceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcEEEEe
Q 006979 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (623)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l~~~d 171 (623)
.++.++ ++.+|...+. .|+..|...+..+| +...-++-+ .++-+...++.+++|+.....++.++++|
T Consensus 46 qGL~~~-~~~LyestG~---~g~S~v~~vD~~Tg-kv~~~~~l~-------~~~FgeGit~~g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGL---NGRSSIRKVDIESG-KTLQQIELG-------KRYFGEGISDWKDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp EEEEEE-TTEEEEEEEE---TTEEEEEEECTTTC-CEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred ceEEEE-CCEEEEECCC---CCCceEEEEECCCC-cEEEEEecC-------CccceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 577788 7777766544 47777888888765 322211111 01113346667889999988889999999
Q ss_pred CCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCC---Ccccc
Q 006979 172 IDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS---DFYAF 248 (623)
Q Consensus 172 ~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~---~~~~~ 248 (623)
+++. .....+.-+ . ....+++||++|+.. . .. ..|+.+|+++.+......+..+. ...+.
T Consensus 114 ~~t~-~~~~ti~~~----~---eG~glt~dg~~L~~S-d-Gs-------~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNE 176 (262)
T 3nol_A 114 IRNL-RQVRSFNYD----G---EGWGLTHNDQYLIMS-D-GT-------PVLRFLDPESLTPVRTITVTAHGEELPELNE 176 (262)
T ss_dssp TTTC-CEEEEEECS----S---CCCCEEECSSCEEEC-C-SS-------SEEEEECTTTCSEEEEEECEETTEECCCEEE
T ss_pred CccC-cEEEEEECC----C---CceEEecCCCEEEEE-C-CC-------CeEEEEcCCCCeEEEEEEeccCCccccccce
Confidence 9876 233444432 1 113356788776553 2 11 67999999987632112222222 22233
Q ss_pred eeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCC------CccccCcCceeCCCCcEEEEEeCCC
Q 006979 249 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP------TIVESPTEPKWSSKGELFFVTDRKN 322 (623)
Q Consensus 249 p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ws~DG~l~~~~~~~~ 322 (623)
.+|. || +|+...|. ..+|.++|..++.. ....-+.+..+ .-.......+|+|+++.+|++..
T Consensus 177 Le~~-~G-~lyan~w~-------~~~I~vIDp~tG~V-~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK-- 244 (262)
T 3nol_A 177 LEWV-DG-EIFANVWQ-------TNKIVRIDPETGKV-TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK-- 244 (262)
T ss_dssp EEEE-TT-EEEEEETT-------SSEEEEECTTTCBE-EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET--
T ss_pred eEEE-CC-EEEEEEcc-------CCeEEEEECCCCcE-EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC--
Confidence 5676 77 46655443 34699999887742 11111211100 00023467899999886667665
Q ss_pred CeeeEEEEe
Q 006979 323 GFWNLHKWI 331 (623)
Q Consensus 323 g~~~L~~~d 331 (623)
.|-.||.+.
T Consensus 245 ~Wp~~~ev~ 253 (262)
T 3nol_A 245 LWPKVFEIT 253 (262)
T ss_dssp TCSEEEEEE
T ss_pred CCCceEEEE
Confidence 566788654
No 451
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.0011 Score=66.84 Aligned_cols=158 Identities=7% Similarity=-0.053 Sum_probs=89.6
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCC---C---ceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCc
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDS---S---PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNS 219 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~---~---~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~ 219 (623)
+.+.+++++ .++++...++.|.++++..+.. . ...+... ........|+|+|++|+....|
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~~v~~sp~g~~las~s~D-------- 128 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH----ENEVKGVAWSNDGYYLATCSRD-------- 128 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--------CEEEEEECTTSCEEEEEETT--------
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC----CCcEEEEEECCCCCEEEEEeCC--------
Confidence 445666665 5566666788899998853200 0 1122221 2346678899999988876654
Q ss_pred eeEEEEEEcCC-CCc-ccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCC
Q 006979 220 TTEIVAIALNG-QNI-QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP 297 (623)
Q Consensus 220 ~~~L~~idl~~-g~~-~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~ 297 (623)
..+.+.|+.. +.. +....+......+....|+|||+.|+-...|. .|.+.+...+.. .....+.+..
T Consensus 129 -~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~~~~~~-~~~~~~~~h~- 197 (330)
T 2hes_X 129 -KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD--------TVRIWKDYDDDW-ECVAVLNGHE- 197 (330)
T ss_dssp -SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEEETTEE-EEEEEECCCS-
T ss_pred -CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC--------eEEEEECCCCCe-eEEEEccCCC-
Confidence 3477778743 221 11223333344566788999999888666443 266667654411 1233344444
Q ss_pred CccccCcCceeCCC--CcEEEEEeCCCCeeeEEEEe
Q 006979 298 TIVESPTEPKWSSK--GELFFVTDRKNGFWNLHKWI 331 (623)
Q Consensus 298 ~~~~~~~~~~ws~D--G~l~~~~~~~~g~~~L~~~d 331 (623)
..+....|+|+ +.+++.... ++.-+||.+.
T Consensus 198 ---~~v~~~~~~~~~~~~~l~s~s~-D~~v~iw~~~ 229 (330)
T 2hes_X 198 ---GTVWSSDFDKTEGVFRLCSGSD-DSTVRVWKYM 229 (330)
T ss_dssp ---SCEEEEEECCSSSSCEEEEEET-TSCEEEEEEE
T ss_pred ---CcEEEEEecCCCCeeEEEEEeC-CCeEEEEEec
Confidence 45667889998 444444444 5666676554
No 452
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=97.99 E-value=2.9e-06 Score=81.92 Aligned_cols=84 Identities=10% Similarity=0.065 Sum_probs=58.8
Q ss_pred CCCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhC-CCCC
Q 006979 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGS-GKAD 572 (623)
Q Consensus 494 ~~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~-~~~d 572 (623)
..|.||++||.+ .....|...+..|++ +|.|+.+|+||.|..... ..+|+.+.++.+.+. +...
T Consensus 12 ~~~~lv~lhg~g--~~~~~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~------------~~~~~~~~~~~~~~~l~~~~ 76 (242)
T 2k2q_B 12 EKTQLICFPFAG--GYSASFRPLHAFLQG-ECEMLAAEPPGHGTNQTS------------AIEDLEELTDLYKQELNLRP 76 (242)
T ss_dssp CCCEEESSCCCC--HHHHHHHHHHHHHCC-SCCCEEEECCSSCCSCCC------------TTTHHHHHHHHTTTTCCCCC
T ss_pred CCceEEEECCCC--CCHHHHHHHHHhCCC-CeEEEEEeCCCCCCCCCC------------CcCCHHHHHHHHHHHHHhhc
Confidence 346688899984 333456667777754 699999999996654221 135666777766543 2222
Q ss_pred CCceEEEEcChHHHHHHHHh
Q 006979 573 EKRLCITGGSAGGYTTLAAL 592 (623)
Q Consensus 573 ~~rv~i~G~S~GG~~~~~~~ 592 (623)
.+++.++||||||.+++.++
T Consensus 77 ~~~~~lvGhSmGG~iA~~~A 96 (242)
T 2k2q_B 77 DRPFVLFGHSMGGMITFRLA 96 (242)
T ss_dssp CSSCEEECCSSCCHHHHHHH
T ss_pred CCCEEEEeCCHhHHHHHHHH
Confidence 36899999999999999888
No 453
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.99 E-value=0.00098 Score=70.47 Aligned_cols=235 Identities=12% Similarity=0.060 Sum_probs=128.4
Q ss_pred CceEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeC--CCCCEEEEEEeccCCCCCCceeEEE
Q 006979 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFD--PRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~s--PdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
+.+..++++..+++...++.|.++|+.++ .....+... ........|+ |+++.++....+ ..+.
T Consensus 165 V~~l~~~~~~~l~s~s~dg~i~vwd~~~~-~~~~~~~~h----~~~v~~l~~~~~~~~~~l~s~s~d---------~~i~ 230 (464)
T 3v7d_B 165 VWALKYAHGGILVSGSTDRTVRVWDIKKG-CCTHVFEGH----NSTVRCLDIVEYKNIKYIVTGSRD---------NTLH 230 (464)
T ss_dssp EEEEEECSTTEEEEEETTSCEEEEETTTT-EEEEEECCC----SSCEEEEEEEESSSCEEEEEEETT---------SCEE
T ss_pred EEEEEEcCCCEEEEEeCCCCEEEEECCCC-cEEEEECCC----CCccEEEEEecCCCCCEEEEEcCC---------CcEE
Confidence 44566666656677778889999999876 223333322 2234444555 677777665543 4477
Q ss_pred EEEcCCCCcccc--------------------eecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCC
Q 006979 225 AIALNGQNIQEP--------------------KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG 284 (623)
Q Consensus 225 ~idl~~g~~~~~--------------------~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~ 284 (623)
++|+.++..... .....+.. ..-..++|+|++|+....+. .|.++|+..+.
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~d~--------~i~vwd~~~~~ 301 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM-ASVRTVSGHGNIVVSGSYDN--------TLIVWDVAQMK 301 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS-SCEEEEEEETTEEEEEETTS--------CEEEEETTTTE
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc-ceEEEEcCCCCEEEEEeCCC--------eEEEEECCCCc
Confidence 778776541000 00001111 11234789999888766332 38888988762
Q ss_pred ceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEe
Q 006979 285 DVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQ 363 (623)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~ 363 (623)
....+.+.. ..+....|+|||+.++.... ++ .|..+|..+++...... ....+. .+.+
T Consensus 302 ---~~~~~~~~~----~~v~~~~~~~~~~~l~sg~~-dg--~i~vwd~~~~~~~~~~~~h~~~v~---------~~~~-- 360 (464)
T 3v7d_B 302 ---CLYILSGHT----DRIYSTIYDHERKRCISASM-DT--TIRIWDLENGELMYTLQGHTALVG---------LLRL-- 360 (464)
T ss_dssp ---EEEEECCCS----SCEEEEEEETTTTEEEEEET-TS--CEEEEETTTTEEEEEECCCSSCEE---------EEEE--
T ss_pred ---EEEEecCCC----CCEEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCcEEEEEeCCCCcEE---------EEEE--
Confidence 333444444 45678899999985555544 34 46667777776433322 211111 1222
Q ss_pred ecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCcc--eEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 364 SHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTD--IDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 364 ~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~~--v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+++ .+++...+|.-+ ++|+.++........... ...+++++..+ +.++ ...+...++.+++.
T Consensus 361 ---~~~-~l~s~s~dg~v~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~----dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 361 ---SDK-FLVSAAADGSIR--GWDANDYSRKFSYHHTNLSAITTFYVSDNIL-VSGS----ENQFNIYNLRSGKL 424 (464)
T ss_dssp ---CSS-EEEEEETTSEEE--EEETTTCCEEEEEECTTCCCEEEEEECSSEE-EEEE----TTEEEEEETTTCCE
T ss_pred ---cCC-EEEEEeCCCcEE--EEECCCCceeeeecCCCCccEEEEEeCCCEE-EEec----CCeEEEEECCCCcE
Confidence 334 445555566544 456666544322222222 22336666644 3443 25788899888863
No 454
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.95 E-value=0.0018 Score=63.49 Aligned_cols=208 Identities=13% Similarity=0.061 Sum_probs=108.4
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCC--CCCCeeecceee-CCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--GEPLVSYADGIF-DPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~--~~~~~~~~d~~~-sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
..+++++ .+++.+..++.|++++.++. ..+.+.... ..........++ +++|+ |++..... ...|+
T Consensus 34 ~v~~~~~g~l~v~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~-------~~~i~ 103 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSP-------THQIQ 103 (286)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGG-------GCEEE
T ss_pred eEEECCCCCEEEEECCCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCC-------CCEEE
Confidence 3444544 67777666778999998743 333443210 000122345667 46664 44433210 15689
Q ss_pred EEEcCCCCcccceecccC-CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccC
Q 006979 225 AIALNGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~-~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 303 (623)
++|.++.. .+.+... ........++|||+ |++.... ...|++++.++. ....+...... ..+
T Consensus 104 ~~d~~g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~-------~~~i~~~~~~g~----~~~~~~~~~~~--~~p 166 (286)
T 1q7f_A 104 IYNQYGQF---VRKFGATILQHPRGVTVDNKGR-IIVVECK-------VMRVIIFDQNGN----VLHKFGCSKHL--EFP 166 (286)
T ss_dssp EECTTSCE---EEEECTTTCSCEEEEEECTTSC-EEEEETT-------TTEEEEECTTSC----EEEEEECTTTC--SSE
T ss_pred EECCCCcE---EEEecCccCCCceEEEEeCCCC-EEEEECC-------CCEEEEEcCCCC----EEEEeCCCCcc--CCc
Confidence 99965443 3334222 22344567999997 6555322 345888886533 22222211101 245
Q ss_pred cCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 304 TEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 304 ~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
..+.+++||++| +++. +...|+++|+++.....+... .....| ..+.+. +++ .+|++...++ ..|
T Consensus 167 ~~i~~~~~g~l~-v~~~--~~~~i~~~~~~g~~~~~~~~~-g~~~~p------~~i~~d---~~G-~l~v~~~~~~-~~i 231 (286)
T 1q7f_A 167 NGVVVNDKQEIF-ISDN--RAHCVKVFNYEGQYLRQIGGE-GITNYP------IGVGIN---SNG-EILIADNHNN-FNL 231 (286)
T ss_dssp EEEEECSSSEEE-EEEG--GGTEEEEEETTCCEEEEESCT-TTSCSE------EEEEEC---TTC-CEEEEECSSS-CEE
T ss_pred EEEEECCCCCEE-EEEC--CCCEEEEEcCCCCEEEEEccC-CccCCC------cEEEEC---CCC-CEEEEeCCCC-EEE
Confidence 678899999754 4544 344688888866544444321 111111 223333 244 5666543221 368
Q ss_pred EEEeCCCCceeeccc
Q 006979 384 GILDDFGHSLSLLDI 398 (623)
Q Consensus 384 ~~~d~~~~~~~~lt~ 398 (623)
.++|.++..++.+..
T Consensus 232 ~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 232 TIFTQDGQLISALES 246 (286)
T ss_dssp EEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEcc
Confidence 888887766666554
No 455
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.93 E-value=0.0004 Score=70.34 Aligned_cols=114 Identities=7% Similarity=-0.036 Sum_probs=77.4
Q ss_pred CceEEEeCC----EEEEEeCCCCcEEEEeCCCCCCCc-eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCcee
Q 006979 147 GGAFRIFGD----TVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTT 221 (623)
Q Consensus 147 ~~~~~~s~d----~l~f~~~~~~~l~~~d~~~g~~~~-~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~ 221 (623)
+.+.+++++ ..+++...++.|.++++.+..... ..+... ........|+|+|++|+....+ .
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------g 108 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH----TGPVLDVCWSDDGSKVFTASCD---------K 108 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC----SSCEEEEEECTTSSEEEEEETT---------S
T ss_pred eEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc----cCCEEEEEECcCCCEEEEEcCC---------C
Confidence 456666665 677777788889999988620111 233322 3346678899999988876543 5
Q ss_pred EEEEEEcCCCCcccceecccCCCcccceee--CCCCCEEEEEEecCCCCCCCceEEEEEEecCCC
Q 006979 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRM--DPRGERMAWIEWHHPNMPWDKAELWVGYISENG 284 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~~~~~~~~p~w--SPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~ 284 (623)
.|.++|+.+++ ...+......+....| +|||+.|+....+ ..|.++|+..+.
T Consensus 109 ~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 109 TAKMWDLSSNQ---AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD--------KTLKFWDTRSSN 162 (368)
T ss_dssp EEEEEETTTTE---EEEEEECSSCEEEEEEEECSSCEEEEEEETT--------SEEEEECSSCSS
T ss_pred cEEEEEcCCCC---ceeeccccCceEEEEEEeCCCCCEEEEccCC--------CcEEEEECCCCc
Confidence 68899999887 4444444445566789 9999988766533 348888987763
No 456
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.00037 Score=80.81 Aligned_cols=157 Identities=10% Similarity=-0.063 Sum_probs=96.6
Q ss_pred CceEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 147 GGAFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 147 ~~~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
+.+.+++++ .++.+...++.|++++..++ ........ ...+....|+| |++|+....+ ..|.+
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--~~~~~~~~----~~~V~~l~fsp-g~~L~S~s~D---------~~v~l 83 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQV--EVVIKLED----RSAIKEMRFVK-GIYLVVINAK---------DTVYV 83 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTC--EEEEECSS----CCCEEEEEEET-TTEEEEEETT---------CEEEE
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCc--EEEEEcCC----CCCEEEEEEcC-CCEEEEEECc---------CeEEE
Confidence 456677766 56666667888999998754 22221111 23466788999 8867665543 56888
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE---------EcCCC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC---------VAGFD 296 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~---------~~~~~ 296 (623)
.|+.+++. ...+. ....+...+|+|||++|+....+. .|.++|++++.. ....+ ..+..
T Consensus 84 Wd~~~~~~--~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg--------~V~lwd~~~~~~-~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 84 LSLYSQKV--LTTVF-VPGKITSIDTDASLDWMLIGLQNG--------SMIVYDIDRDQL-SSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EETTTCSE--EEEEE-CSSCEEEEECCTTCSEEEEEETTS--------CEEEEETTTTEE-EEEEECCHHHHHTCSSSCC
T ss_pred EECCCCcE--EEEEc-CCCCEEEEEECCCCCEEEEEcCCC--------cEEEEECCCCcc-ccceeccccccccccccCC
Confidence 99988762 23333 233456678999999988665332 378889876621 11111 11122
Q ss_pred CCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEecCCCeEEE
Q 006979 297 PTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLA 339 (623)
Q Consensus 297 ~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d~~~~~~~~ 339 (623)
..+....|+|++. ++++... ++. + .+|..+++...
T Consensus 152 ----~~V~sl~~sp~~~~~l~~g~~-dg~--v-lWd~~~~~~~~ 187 (902)
T 2oaj_A 152 ----SPIVSIQWNPRDIGTVLISYE-YVT--L-TYSLVENEIKQ 187 (902)
T ss_dssp ----CCCCEEEEETTEEEEEEEECS-SCE--E-EEETTTTEEEE
T ss_pred ----CCeEEEEEccCCCCEEEEEeC-CCc--E-EEECCCCceEE
Confidence 4577889999754 5555443 343 5 67887776443
No 457
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.00046 Score=65.93 Aligned_cols=200 Identities=10% Similarity=-0.028 Sum_probs=111.2
Q ss_pred EEeCCEEEEEeCCC--CcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEc
Q 006979 151 RIFGDTVIFSNYKD--QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (623)
Q Consensus 151 ~~s~d~l~f~~~~~--~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl 228 (623)
.++++.++++.... +.|.++|++++ ...+.+.-. . ++..-.+.+++++|+...+.. +.++++|+
T Consensus 27 ~~~~~~LyestG~~g~S~v~~vD~~tg-kv~~~~~l~----~-~~fgeGi~~~~~~ly~ltw~~--------~~v~v~D~ 92 (243)
T 3mbr_X 27 FYLRGHLYESTGETGRSSVRKVDLETG-RILQRAEVP----P-PYFGAGIVAWRDRLIQLTWRN--------HEGFVYDL 92 (243)
T ss_dssp EEETTEEEEEECCTTSCEEEEEETTTC-CEEEEEECC----T-TCCEEEEEEETTEEEEEESSS--------SEEEEEET
T ss_pred EEECCEEEEECCCCCCceEEEEECCCC-CEEEEEeCC----C-CcceeEEEEeCCEEEEEEeeC--------CEEEEEEC
Confidence 44567888887664 36999999988 222333321 1 111122455677887765432 78999999
Q ss_pred CCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee
Q 006979 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (623)
Q Consensus 229 ~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 308 (623)
++.+. +..+..+.+ +-..++||++|+ ++ +. ..+|+++|.++...+ .++..+.++.-...+....|
T Consensus 93 ~tl~~--~~ti~~~~~---Gwglt~dg~~L~-vS-dg------s~~l~~iDp~t~~~~--~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 93 ATLTP--RARFRYPGE---GWALTSDDSHLY-MS-DG------TAVIRKLDPDTLQQV--GSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp TTTEE--EEEEECSSC---CCEEEECSSCEE-EE-CS------SSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEE
T ss_pred CcCcE--EEEEeCCCC---ceEEeeCCCEEE-EE-CC------CCeEEEEeCCCCeEE--EEEEEccCCcccccceeeEE
Confidence 98763 334433322 234668998775 44 43 345999998776432 22222111010022345566
Q ss_pred CCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeeccc---cccc--ccccccCcceeEEeecCCCCEEEEEEEECCeEEE
Q 006979 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDA---EFSR--PLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (623)
Q Consensus 309 s~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~---~~~~--~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L 383 (623)
. ||++| +... ....|.++|+.+++......... .... ..-..-.+.+++. |+++.||++. .-+..|
T Consensus 158 ~-~G~ly-anvw--~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d---~~~~~lfVTG--K~wp~~ 228 (243)
T 3mbr_X 158 V-NGELL-ANVW--LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD---AEHDRLFVTG--KRWPML 228 (243)
T ss_dssp E-TTEEE-EEET--TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE---TTTTEEEEEE--TTCSEE
T ss_pred e-CCEEE-EEEC--CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc---CCCCEEEEEC--CCCCcE
Confidence 5 77655 5544 23379999999998665443210 0000 0000112344554 3778888876 557788
Q ss_pred EEEeC
Q 006979 384 GILDD 388 (623)
Q Consensus 384 ~~~d~ 388 (623)
|.+.+
T Consensus 229 ~~v~~ 233 (243)
T 3mbr_X 229 YEIRL 233 (243)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 458
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.87 E-value=0.00034 Score=70.18 Aligned_cols=252 Identities=10% Similarity=-0.028 Sum_probs=124.6
Q ss_pred CccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC---CEEEEEeCCC
Q 006979 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYKD 164 (623)
Q Consensus 89 ~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~---d~l~f~~~~~ 164 (623)
..+..+.++| +..+. .-. .++...||....+ +...+.. -.-|...+.+.++++ +.++++...|
T Consensus 14 ~~V~~v~~s~~g~~la-sgs---~D~~v~lwd~~~~---~~~~~~~------l~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLA-TCS---SDRSVKIFDVRNG---GQILIAD------LRGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp CCEEEEEECGGGCEEE-EEE---TTTEEEEEEEETT---EEEEEEE------EECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred CeEEEeeEcCCCCEEE-EEe---CCCeEEEEEecCC---CcEEEEE------EcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 4456788888 55443 322 2466667755322 1111100 000122233445542 3566676678
Q ss_pred CcEEEEeCCCCCCCce---ecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc-cee
Q 006979 165 QRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE-PKV 238 (623)
Q Consensus 165 ~~l~~~d~~~g~~~~~---~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~-~~~ 238 (623)
+.|.++|+.++ ... .+... ........|+|+ |+.|+....+ ..+.++|+.++.... ...
T Consensus 81 ~~v~iWd~~~~--~~~~~~~~~~h----~~~V~~v~~~p~~~g~~lasgs~D---------~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 81 RKVIIWREENG--TWEKSHEHAGH----DSSVNSVCWAPHDYGLILACGSSD---------GAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp SCEEEECCSSS--CCCEEEEECCC----SSCCCEEEECCTTTCSCEEEECSS---------SCEEEEEECSSSCEEECCB
T ss_pred CEEEEEECCCC--cceEEEEccCC----CCceEEEEECCCCCCcEEEEEcCC---------CCEEEEecCCCCCcceeee
Confidence 88999999765 221 22221 234667889998 6666655443 346777776642100 111
Q ss_pred cccCCCcccceeeCCCC-----------------CEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccc
Q 006979 239 LVSGSDFYAFPRMDPRG-----------------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (623)
Q Consensus 239 l~~~~~~~~~p~wSPDG-----------------~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~ 301 (623)
+...........|+|++ ++|+-...| ..|.+.|+...+.......+.+.. .
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D--------~~v~lWd~~~~~~~~~~~~l~~h~----~ 213 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD--------NLIKLWKEEEDGQWKEEQKLEAHS----D 213 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT--------SBCCEEEECTTSCEEEEECCBCCS----S
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCC--------CeEEEEEeCCCCccceeeecccCC----C
Confidence 12222234557799983 444433222 235666765442111222233433 4
Q ss_pred cCcCceeCCCC----cEEEEEeCCCCeeeEEEEecCC-Ce--EEEEeecccccccccccccCcceeEEeecCCCCEEEEE
Q 006979 302 SPTEPKWSSKG----ELFFVTDRKNGFWNLHKWIESN-NE--VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACS 374 (623)
Q Consensus 302 ~~~~~~ws~DG----~l~~~~~~~~g~~~L~~~d~~~-~~--~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~ 374 (623)
.+....|+|++ +++..... ++.-+||.++... ++ .+.+......+....|+ |+++.| ++
T Consensus 214 ~V~~v~~sp~~~~~~~~las~s~-D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~s------------p~g~~l-as 279 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASCSQ-DGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWS------------ITANIL-AV 279 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEEET-TCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEEC------------TTTCCE-EE
T ss_pred ceEEEEecCCCCCCCceEEEEcC-CCeEEEEEccCccccchhhhhhhcCCCcEEEEEEc------------CCCCEE-EE
Confidence 56788999987 54544444 4665665443211 11 12222222222223333 266554 45
Q ss_pred EEECCeEEEEEEeCCCCceee
Q 006979 375 YRQNGRSYLGILDDFGHSLSL 395 (623)
Q Consensus 375 ~~~~g~~~L~~~d~~~~~~~~ 395 (623)
...++.-+||..+.. ++++.
T Consensus 280 ~~~D~~v~lw~~~~~-g~~~~ 299 (316)
T 3bg1_A 280 SGGDNKVTLWKESVD-GQWVC 299 (316)
T ss_dssp EESSSCEEEEEECTT-SCEEE
T ss_pred EcCCCeEEEEEECCC-CcEEE
Confidence 556788888877654 44443
No 459
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.00076 Score=70.69 Aligned_cols=161 Identities=7% Similarity=0.056 Sum_probs=92.3
Q ss_pred CceEEEeC-C-EEEEEeCCCCcEEEEeCCC---CCCCce-ecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCce
Q 006979 147 GGAFRIFG-D-TVIFSNYKDQRLYKHSIDS---KDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNST 220 (623)
Q Consensus 147 ~~~~~~s~-d-~l~f~~~~~~~l~~~d~~~---g~~~~~-~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~ 220 (623)
+.+.++++ + .++++...++.|.++|+.+ + ...+ .++.. .........|+|+++.|+....+
T Consensus 66 V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~d--------- 132 (437)
T 3gre_A 66 ITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-EVYSSSLTYD---CSSTVTQITMIPNFDAFAVSSKD--------- 132 (437)
T ss_dssp EEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-CCCSCSEEEE---CSSCEEEEEECTTSSEEEEEETT---------
T ss_pred eEEEEECCCCCCEEEEecCCceEEEeECcccccC-cccceeeecc---CCCCEEEEEEeCCCCEEEEEeCC---------
Confidence 44566666 4 5666777888899999865 3 1011 11100 02346678899999988876654
Q ss_pred eEEEEEEcC---CCCcc------cceecc--c--CCCcccce--eeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCc
Q 006979 221 TEIVAIALN---GQNIQ------EPKVLV--S--GSDFYAFP--RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD 285 (623)
Q Consensus 221 ~~L~~idl~---~g~~~------~~~~l~--~--~~~~~~~p--~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~ 285 (623)
..|.++|++ .++.. .++.+. . ..+..... .++|||+.|+....+ ..|.++|+..+.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~- 203 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL--------SRVIIFDIRTLE- 203 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT--------SEEEEEETTTCC-
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCe-
Confidence 346666663 33210 011111 1 11222222 278999988776533 358899998763
Q ss_pred eeeeEEEcC--CCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEE
Q 006979 286 VYKRVCVAG--FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (623)
Q Consensus 286 ~~~~~~~~~--~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~ 338 (623)
....+.+ .. ..+....|+|||++++.... +|. |..+|+.+++..
T Consensus 204 --~~~~~~~~~h~----~~v~~~~~s~~~~~l~s~~~-dg~--i~iwd~~~~~~~ 249 (437)
T 3gre_A 204 --RLQIIENSPRH----GAVSSICIDEECCVLILGTT-RGI--IDIWDIRFNVLI 249 (437)
T ss_dssp --EEEEEECCGGG----CCEEEEEECTTSCEEEEEET-TSC--EEEEETTTTEEE
T ss_pred --eeEEEccCCCC----CceEEEEECCCCCEEEEEcC-CCe--EEEEEcCCccEE
Confidence 3333443 22 45678899999986655554 344 556677666543
No 460
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.0029 Score=66.21 Aligned_cols=212 Identities=8% Similarity=-0.054 Sum_probs=114.3
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.|+| ++.++..-.. +|...+|.......+.... . ....-|...+.+..++++ ..+++...++
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~---dg~v~vwd~~~~~~~~~~~--~----~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSD---QGVIKIWNLKEIIVGEVYS--S----SLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEET---TSEEEEEEHHHHHTTCCCS--C----SEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCceEEEEECCCCCCEEEEecC---CceEEEeECcccccCcccc--e----eeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 35567888998 6666555433 5777778654310001000 0 000012233456666665 5566666788
Q ss_pred cEEEEeCC---CCCCCceecCCC---------CCCCCeeec--ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC
Q 006979 166 RLYKHSID---SKDSSPLPITPD---------YGEPLVSYA--DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (623)
Q Consensus 166 ~l~~~d~~---~g~~~~~~Lt~~---------~~~~~~~~~--d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g 231 (623)
.|.++|+. .+ ........ ......... ...++|+++.++....+ ..|.++|+.++
T Consensus 134 ~i~vwd~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~ 202 (437)
T 3gre_A 134 QIIVLKVNHYQQE--SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL---------SRVIIFDIRTL 202 (437)
T ss_dssp EEEEEEEEEEEET--TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT---------SEEEEEETTTC
T ss_pred EEEEEEeccccCC--ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCC
Confidence 88888873 33 21111110 000001111 12266888877766543 56999999887
Q ss_pred Ccccceeccc--CCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEc-CCCCCccccCcCc--
Q 006979 232 NIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-GFDPTIVESPTEP-- 306 (623)
Q Consensus 232 ~~~~~~~l~~--~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~-- 306 (623)
+. ...+.. ....+....|+|||++|+....+. .|.++|+..+. ....+. ... ..+...
T Consensus 203 ~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--------~i~iwd~~~~~---~~~~~~~~~~----~~v~~~~~ 265 (437)
T 3gre_A 203 ER--LQIIENSPRHGAVSSICIDEECCVLILGTTRG--------IIDIWDIRFNV---LIRSWSFGDH----APITHVEV 265 (437)
T ss_dssp CE--EEEEECCGGGCCEEEEEECTTSCEEEEEETTS--------CEEEEETTTTE---EEEEEBCTTC----EEEEEEEE
T ss_pred ee--eEEEccCCCCCceEEEEECCCCCEEEEEcCCC--------eEEEEEcCCcc---EEEEEecCCC----CceEEEEe
Confidence 62 233333 234566678999999888665332 38888988752 222222 322 334455
Q ss_pred --eeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEE
Q 006979 307 --KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA 339 (623)
Q Consensus 307 --~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~ 339 (623)
.|++||++++.... ++ .|..+|..+++...
T Consensus 266 ~~~~s~~~~~l~s~~~-dg--~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSS-KT--FLTIWNFVKGHCQY 297 (437)
T ss_dssp CTTTCTTEEEEEEEST-TE--EEEEEETTTTEEEE
T ss_pred ccccCCCccEEEEEcC-CC--cEEEEEcCCCcEEE
Confidence 55567765555443 33 56677877776443
No 461
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.00026 Score=80.50 Aligned_cols=205 Identities=9% Similarity=0.022 Sum_probs=117.4
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeC---CEEEEEeCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG---DTVIFSNYK 163 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~---d~l~f~~~~ 163 (623)
...+..+.|+| ++.++-- . .+|...+|.....++ .....+.. |...+.+..+++ +..+++...
T Consensus 9 ~~~V~~l~~s~dg~~latg-~---~dg~I~vwd~~~~~~-~~~~~l~~--------h~~~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATC-S---SDKTIKIFEVEGETH-KLIDTLTG--------HEGPVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp CCCEEEECCCSSSCCEEEE-E---TTTEEEEEEEETTEE-EEEEEECC--------CSSCEEEEEECCTTSCSEEEEEET
T ss_pred cceeEEEEECCCCCeEEEE-E---CCCcEEEEecCCCCC-ccceeccC--------CcCceEEEEecCCCCCCEEEEEeC
Confidence 34456777888 5544432 2 247777776542211 11111111 122234455543 345666667
Q ss_pred CCcEEEEeCCCCCCCc---eecCCCCCCCCeeecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEEcCCCCccccee
Q 006979 164 DQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (623)
Q Consensus 164 ~~~l~~~d~~~g~~~~---~~Lt~~~~~~~~~~~d~~~sPd--G~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~ 238 (623)
++.|.++|+.++ .. ..+... ........|+|+ |+.++....+ +.+.++|+.++.......
T Consensus 76 Dg~I~vwd~~~~--~~~~~~~~~~h----~~~V~~v~~sp~~~~~~l~sgs~d---------g~I~vwdl~~~~~~~~~~ 140 (753)
T 3jro_A 76 DGKVLIWKEENG--RWSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSD---------GKVSVVEFKENGTTSPII 140 (753)
T ss_dssp TSCEEEEEEETT--EEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEECCSSSCCCCEE
T ss_pred CCeEEEEECCCC--cccccccccCC----CCCeEEEEECCCCCCCEEEEEeCC---------CcEEEEEeecCCCcceeE
Confidence 888999998865 31 222221 345667889999 8888776553 568888988763211233
Q ss_pred cccCCCcccceeeCC-------------CCCEEEEEEecCCCCCCCceEEEEEEecCCCce-eeeEEEcCCCCCccccCc
Q 006979 239 LVSGSDFYAFPRMDP-------------RGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 239 l~~~~~~~~~p~wSP-------------DG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 304 (623)
+......+....|+| ||+.|+....+. .|.++|+..+... .....+.+.. ..+.
T Consensus 141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg--------~I~iwd~~~~~~~~~~~~~~~~h~----~~V~ 208 (753)
T 3jro_A 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--------LVKIWKYNSDAQTYVLESTLEGHS----DWVR 208 (753)
T ss_dssp EECCSSCEEEEEECCCC---------CGGGCCEEEEETTS--------CEEEEEEETTTTEEEEEEEECCCS----SCEE
T ss_pred eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC--------eEEEEeccCCcccceeeeeecCCC----CcEE
Confidence 333444556678999 688887665332 3888888766321 1222334444 5677
Q ss_pred CceeCCC---CcEEEEEeCCCCeeeEEEEecCCC
Q 006979 305 EPKWSSK---GELFFVTDRKNGFWNLHKWIESNN 335 (623)
Q Consensus 305 ~~~ws~D---G~l~~~~~~~~g~~~L~~~d~~~~ 335 (623)
.+.|+|+ |++++.... +|.-.+| |..++
T Consensus 209 ~l~~sp~~~~~~~l~s~s~-Dg~I~iw--d~~~~ 239 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQ-DRTCIIW--TQDNE 239 (753)
T ss_dssp EEEECCCCSSSEEEEEEES-SSCEEEE--EESSS
T ss_pred EEEeccCCCCCCEEEEEec-CCEEEEe--cCCCC
Confidence 8999999 775555554 4554444 55444
No 462
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.83 E-value=0.0039 Score=61.10 Aligned_cols=229 Identities=11% Similarity=0.022 Sum_probs=121.5
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
+.+.+++ .+++....++.|++++.+ + ....+... ..........++|+|+.++. .... ..|+++|
T Consensus 19 ~i~~d~~g~l~v~~~~~~~v~~~d~~-~--~~~~~~~~--~~~~~~~~i~~~~~g~l~v~-~~~~--------~~i~~~~ 84 (299)
T 2z2n_A 19 GITVSDKGKVWITQHKANMISCINLD-G--KITEYPLP--TPDAKVMCLTISSDGEVWFT-ENAA--------NKIGRIT 84 (299)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-C--CEEEEECS--STTCCEEEEEECTTSCEEEE-ETTT--------TEEEEEC
T ss_pred ceEECCCCCEEEEecCCCcEEEEcCC-C--CeEEecCC--cccCceeeEEECCCCCEEEe-CCCC--------CeEEEEC
Confidence 3444444 677776556779999987 5 44443311 01233456778999974433 2211 5699999
Q ss_pred cCCCCcccceecc--cCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 228 LNGQNIQEPKVLV--SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 228 l~~g~~~~~~~l~--~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
.+ ++ .+.+. ..........++|||+ |++.... ...|++++. .+. ......... . ..+..
T Consensus 85 ~~-g~---~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~-------~~~i~~~d~-~g~---~~~~~~~~~-~--~~~~~ 145 (299)
T 2z2n_A 85 KK-GI---IKEYTLPNPDSAPYGITEGPNGD-IWFTEMN-------GNRIGRITD-DGK---IREYELPNK-G--SYPSF 145 (299)
T ss_dssp TT-SC---EEEEECSSTTCCEEEEEECTTSC-EEEEETT-------TTEEEEECT-TCC---EEEEECSST-T--CCEEE
T ss_pred CC-Cc---EEEEeCCCcCCCceeeEECCCCC-EEEEecC-------CceEEEECC-CCC---EEEecCCCC-C--CCCce
Confidence 87 43 33332 1223344567899986 5544322 335888887 331 222221111 1 34567
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEE
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~ 385 (623)
..+++||++++... +...|+++|+ +++.+.+... ..... ...+.+. ++ +.+++... +...|++
T Consensus 146 i~~~~~g~l~v~~~---~~~~i~~~~~-~g~~~~~~~~-~~~~~------~~~i~~~---~~-g~l~v~~~--~~~~i~~ 208 (299)
T 2z2n_A 146 ITLGSDNALWFTEN---QNNAIGRITE-SGDITEFKIP-TPASG------PVGITKG---ND-DALWFVEI--IGNKIGR 208 (299)
T ss_dssp EEECTTSCEEEEET---TTTEEEEECT-TCCEEEEECS-STTCC------EEEEEEC---TT-SSEEEEET--TTTEEEE
T ss_pred EEEcCCCCEEEEeC---CCCEEEEEcC-CCcEEEeeCC-CCCCc------ceeEEEC---CC-CCEEEEcc--CCceEEE
Confidence 78889997665443 2346889998 6665544211 01111 1123332 24 44666542 3346888
Q ss_pred EeCCCCceeecccC--CcceEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 006979 386 LDDFGHSLSLLDIP--FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 386 ~d~~~~~~~~lt~~--~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~ 432 (623)
+|. +++.+.+..+ ......+ +++ +.+++... ....|++++.+
T Consensus 209 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~---~~~~i~~~d~~ 254 (299)
T 2z2n_A 209 ITT-SGEITEFKIPTPNARPHAITAGAG-IDLWFTEW---GANKIGRLTSN 254 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECST-TCEEEEET---TTTEEEEEETT
T ss_pred ECC-CCcEEEEECCCCCCCceeEEECCC-CCEEEecc---CCceEEEECCC
Confidence 998 6666554332 2234444 444 44555432 23568888873
No 463
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.81 E-value=0.0058 Score=59.00 Aligned_cols=206 Identities=11% Similarity=0.099 Sum_probs=112.6
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc-cCCCcccceeeCCCCCEEEEEEecCCCCCC
Q 006979 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPW 270 (623)
Q Consensus 192 ~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~-~~~~~~~~p~wSPDG~~la~~~~~~~~~p~ 270 (623)
.....+|+|+++.|+++.+.. ..|+.+|++ +++ .+.+. .+..-+.+.++.+||+ + ++...+
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~--------~~I~~ld~~-g~v--~~~i~l~g~~D~EGIa~~~~g~-~-~vs~E~----- 89 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKP--------AAIVEMTTN-GDL--IRTIPLDFVKDLETIEYIGDNQ-F-VISDER----- 89 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETT--------EEEEEEETT-CCE--EEEEECSSCSSEEEEEECSTTE-E-EEEETT-----
T ss_pred CcceeEEeCCCCEEEEEECCC--------CeEEEEeCC-CCE--EEEEecCCCCChHHeEEeCCCE-E-EEEECC-----
Confidence 466788999999888877653 779999998 553 34442 2222244567888885 3 344233
Q ss_pred CceEEEEEEecCCCceeeeEEEc-C---CCCCccccCcCceeCCCCc-EEEEEeCCCCeeeEEEEe--cCCCeEEEEeec
Q 006979 271 DKAELWVGYISENGDVYKRVCVA-G---FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWI--ESNNEVLAIYSL 343 (623)
Q Consensus 271 ~~~~L~v~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~L~~~d--~~~~~~~~l~~~ 343 (623)
..+|++++++..+.+....... . .... ......+|+|+++ ||....+ +...||.++ +.+...+.+...
T Consensus 90 -~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N--~g~EGLA~d~~~~~L~va~E~--~p~~i~~~~g~~~~~~l~i~~~~ 164 (255)
T 3qqz_A 90 -DYAIYVISLTPNSEVKILKKIKIPLQESPTN--CGFEGLAYSRQDHTFWFFKEK--NPIEVYKVNGLLSSNELHISKDK 164 (255)
T ss_dssp -TTEEEEEEECTTCCEEEEEEEECCCSSCCCS--SCCEEEEEETTTTEEEEEEES--SSEEEEEEESTTCSSCCEEEECH
T ss_pred -CCcEEEEEcCCCCeeeeeeeecccccccccc--CCcceEEEeCCCCEEEEEECc--CCceEEEEcccccCCceeeecch
Confidence 3468999887765321111111 1 1111 4457889999987 6665554 556899887 222222222110
Q ss_pred ccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCceeecccCCc---------ceEee--eecCCE
Q 006979 344 DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFT---------DIDNI--TLGNDC 412 (623)
Q Consensus 344 ~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~~lt~~~~---------~v~~~--~~~~~~ 412 (623)
.+....-....+...+.+ ..+++|+.+. ....|..+|.++..+..+....+ .-.++ ++++ .
T Consensus 165 --~~~~~~~~~d~S~l~~dp---~tg~lliLS~--~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-~ 236 (255)
T 3qqz_A 165 --ALQRQFTLDDVSGAEFNQ---QKNTLLVLSH--ESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-N 236 (255)
T ss_dssp --HHHHTCCSSCCCEEEEET---TTTEEEEEET--TTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-C
T ss_pred --hhccccccCCceeEEEcC---CCCeEEEEEC--CCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCC-C
Confidence 000000011224444443 6677888774 34568888888764444433211 12334 4444 4
Q ss_pred EEEEEecCCCCCeEEEEEcC
Q 006979 413 LFVEGASGVEPSSVAKVTLD 432 (623)
Q Consensus 413 ~~~~~~s~~~~~~ly~~~l~ 432 (623)
+|++ +. |..+|++...
T Consensus 237 lyIv-sE---~n~~y~f~~~ 252 (255)
T 3qqz_A 237 IYIV-SE---PNRFYRFTPQ 252 (255)
T ss_dssp EEEE-ET---TTEEEEEEC-
T ss_pred EEEE-cC---CceEEEEEec
Confidence 6655 32 3478887644
No 464
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.79 E-value=0.0011 Score=67.72 Aligned_cols=77 Identities=12% Similarity=0.089 Sum_probs=48.0
Q ss_pred cccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEc-C-CCCCccccCcCceeCCCCcEEE
Q 006979 239 LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-G-FDPTIVESPTEPKWSSKGELFF 316 (623)
Q Consensus 239 l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ws~DG~l~~ 316 (623)
+....+.+...+|||||++|+-...| +..|.+.|+.++. ....+. + .. ..+....|+|||++++
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d-------~~~v~iwd~~~~~---~~~~~~~g~h~----~~v~~~~~s~~~~~l~ 256 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQD-------GTIIRVFKTEDGV---LVREFRRGLDR----ADVVDMKWSTDGSKLA 256 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETT-------CSEEEEEETTTCC---EEEEEECTTCC----SCEEEEEECTTSCEEE
T ss_pred EEccCCceEEEEECCCCCEEEEEeCC-------CCEEEEEECCCCc---EEEEEEcCCCC----CcEEEEEECCCCCEEE
Confidence 33333445667899999988866533 2227777888763 233343 3 33 4677899999999555
Q ss_pred EEeCCCCeeeEEEE
Q 006979 317 VTDRKNGFWNLHKW 330 (623)
Q Consensus 317 ~~~~~~g~~~L~~~ 330 (623)
.... ++.-+||.+
T Consensus 257 s~s~-d~~v~iw~~ 269 (355)
T 3vu4_A 257 VVSD-KWTLHVFEI 269 (355)
T ss_dssp EEET-TCEEEEEES
T ss_pred EEEC-CCEEEEEEc
Confidence 5444 455555543
No 465
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.002 Score=63.57 Aligned_cols=225 Identities=12% Similarity=0.060 Sum_probs=118.2
Q ss_pred CCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCc
Q 006979 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (623)
Q Consensus 154 ~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~ 233 (623)
++..+++...++.|.++|+.++ .....+... ........|+|+++.|+....+ ..+.++++.....
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~ 93 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQ-WLGTVVYTG----QGFLNSVCYDSEKELLLFGGKD---------TMINGVPLFATSG 93 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSS-EEEEEEEEC----SSCEEEEEEETTTTEEEEEETT---------SCEEEEETTCCTT
T ss_pred CCCEEEEEEcCCcEEEEECCCC-EEEEEeecC----CccEEEEEECCCCCEEEEecCC---------CeEEEEEeeecCC
Confidence 3344556667888999998765 122223222 3346678899999988876654 3467777655421
Q ss_pred -ccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC-C
Q 006979 234 -QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-K 311 (623)
Q Consensus 234 -~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~-D 311 (623)
.....+...........| |++.|+....+ ..|.++| .+ .....+.... ..+....|.+ +
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d--------~~i~~~d--~~---~~~~~~~~~~----~~v~~~~~~~~~ 154 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWD--------KTAKVWK--EG---SLVYNLQAHN----ASVWDAKVVSFS 154 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETT--------SEEEEEE--TT---EEEEEEECCS----SCEEEEEEEETT
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCC--------CCEEEEc--CC---cEEEecccCC----CceeEEEEccCC
Confidence 112233323333444456 77877766532 3477777 22 1333344433 4556778887 7
Q ss_pred CcEEEEEeCCCCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 312 GELFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 312 G~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
+++++.... ++. |..+|. ......+.. ....+. .+.+.+ ++. +++...+|. |.++|+.+
T Consensus 155 ~~~l~~~~~-d~~--i~i~d~-~~~~~~~~~~~~~~i~---------~~~~~~---~~~--~~~~~~dg~--i~i~d~~~ 214 (313)
T 3odt_A 155 ENKFLTASA-DKT--IKLWQN-DKVIKTFSGIHNDVVR---------HLAVVD---DGH--FISCSNDGL--IKLVDMHT 214 (313)
T ss_dssp TTEEEEEET-TSC--EEEEET-TEEEEEECSSCSSCEE---------EEEEEE---TTE--EEEEETTSE--EEEEETTT
T ss_pred CCEEEEEEC-CCC--EEEEec-CceEEEEeccCcccEE---------EEEEcC---CCe--EEEccCCCe--EEEEECCc
Confidence 775555554 454 444452 222222222 222222 233332 444 445545554 55667776
Q ss_pred Cce-eecccCCcceEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 391 HSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 391 ~~~-~~lt~~~~~v~~~--~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
++. ..+......+..+ ++++ ++ +++.. ...|+.+++.+++.
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~-~l-~~~~~---dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 215 GDVLRTYEGHESFVYCIKLLPNG-DI-VSCGE---DRTVRIWSKENGSL 258 (313)
T ss_dssp CCEEEEEECCSSCEEEEEECTTS-CE-EEEET---TSEEEEECTTTCCE
T ss_pred hhhhhhhhcCCceEEEEEEecCC-CE-EEEec---CCEEEEEECCCCce
Confidence 654 3444344445555 4444 33 33332 25688888777653
No 466
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.79 E-value=0.0013 Score=70.77 Aligned_cols=160 Identities=10% Similarity=-0.020 Sum_probs=90.6
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCc-e--ecCCCCCCCCeeecceee-C-CCCCEEEEEEeccC---------CCCCCcee
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSP-L--PITPDYGEPLVSYADGIF-D-PRFNRYVTVREDRR---------QDALNSTT 221 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~-~--~Lt~~~~~~~~~~~d~~~-s-PdG~~l~~v~~~~~---------~~~~~~~~ 221 (623)
.+++.+..+++|.++|+++. +. + .|..+ .....+.+ + |+++++++..+... ..+++..+
T Consensus 103 ~lfVnd~~~~rVavIdl~t~--~~~~ii~ip~g-----~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVM--KCDAILEIPNA-----KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEETTTTEEEEEETTTT--EEEEEEECSSC-----CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred EEEEEcCCCCEEEEEECCCc--eEeeEEeCCCC-----CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 45555555667999999976 32 2 33322 11223444 5 99999877654221 01234577
Q ss_pred EEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCC--------CCceE-------------------
Q 006979 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMP--------WDKAE------------------- 274 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p--------~~~~~------------------- 274 (623)
.+-++|.++.++ ..++.-+. .......||||++++..+.+. ++- .....
T Consensus 176 ~vtvID~~t~~v--~~qI~Vgg-~pd~~~~spdGk~~~vt~~~s-e~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 176 VFTAVDADKWEV--AWQVLVSG-NLDNCDADYEGKWAFSTSYNS-EKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEETTTTEE--EEEEEESS-CCCCEEECSSSSEEEEEESCT-TCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred eEEEEECCCCeE--EEEEEeCC-CccceEECCCCCEEEEEecCc-ccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 899999998763 23333222 234467999999887776443 210 00112
Q ss_pred ----EEEEEecC--CCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCC
Q 006979 275 ----LWVGYISE--NGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN 335 (623)
Q Consensus 275 ----L~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~ 335 (623)
+-++|... +.. ....+.-. ..+....++|||+.+++++. +..++..+|.++.
T Consensus 252 ~i~~V~VID~~~~~~~~--~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~--~s~~VsVid~~~~ 309 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSL--FTRYIPIA-----NNPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRF 309 (595)
T ss_dssp EETTEEEEECSGGGCCS--SEEEEEEE-----SSCCCEEECTTSSEEEEECT--TSSBEEEEEGGGH
T ss_pred EECcEEEEeCcccCCce--eEEEEecC-----CCceEEEEcCCCCEEEEeCC--CCCeEEEEECccc
Confidence 34444443 110 01111111 23567899999998888876 5556777887643
No 467
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.78 E-value=0.0033 Score=61.59 Aligned_cols=198 Identities=12% Similarity=0.044 Sum_probs=105.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCccc-CCCCCccceeeeecCCceEEEeC-CEEEEEeCCCCcE
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDI-TPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKDQRL 167 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l-~p~~~~~r~~~~~~g~~~~~~s~-d~l~f~~~~~~~l 167 (623)
.+..+.+++++.+|+.... ...|++++.. + +.... .+... ......+.++ +.+++.....+.|
T Consensus 63 ~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g-~~~~~~~~~~~--------~~~~~i~~~~~g~l~v~~~~~~~i 127 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-G-GFTEYPLPQPD--------SGPYGITEGLNGDIWFTQLNGDRI 127 (300)
T ss_dssp CEEEEEECTTSCEEEEETT-----TTEEEEECTT-S-CEEEEECSSTT--------CCEEEEEECSTTCEEEEETTTTEE
T ss_pred cceeEEECCCCCEEEEecC-----CCeEEEECCC-C-CeEEecCCCCC--------CCCccceECCCCCEEEEccCCCeE
Confidence 4556777765667766522 2236666655 2 33222 22110 0122334443 3677777666789
Q ss_pred EEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecc--cCCCc
Q 006979 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV--SGSDF 245 (623)
Q Consensus 168 ~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~--~~~~~ 245 (623)
++++.+ + ....+... ..........++|+|+ |++..... ..|+++|. +++ ...+. .....
T Consensus 128 ~~~~~~-g--~~~~~~~~--~~~~~~~~i~~d~~g~-l~v~~~~~--------~~i~~~~~-~g~---~~~~~~~~~~~~ 189 (300)
T 2qc5_A 128 GKLTAD-G--TIYEYDLP--NKGSYPAFITLGSDNA-LWFTENQN--------NSIGRITN-TGK---LEEYPLPTNAAA 189 (300)
T ss_dssp EEECTT-S--CEEEEECS--STTCCEEEEEECTTSS-EEEEETTT--------TEEEEECT-TCC---EEEEECSSTTCC
T ss_pred EEECCC-C--CEEEccCC--CCCCCceeEEECCCCC-EEEEecCC--------CeEEEECC-CCc---EEEeeCCCCCCC
Confidence 999987 5 34333211 0123345677899998 44433211 56999998 454 33332 22223
Q ss_pred ccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE-EcCCCCCccccCcCceeCCCCcEEEEEeCCCCe
Q 006979 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-VAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 324 (623)
Q Consensus 246 ~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~ 324 (623)
.....++|||+ |++.... ...|++++.++. .... +.... ..+..+..+++|++++ ++. +.
T Consensus 190 ~~~i~~d~~g~-l~v~~~~-------~~~i~~~~~~g~----~~~~~~~~~~----~~~~~i~~d~~g~l~v-~~~--~~ 250 (300)
T 2qc5_A 190 PVGITSGNDGA-LWFVEIM-------GNKIGRITTTGE----ISEYDIPTPN----ARPHAITAGKNSEIWF-TEW--GA 250 (300)
T ss_dssp EEEEEECTTSS-EEEEETT-------TTEEEEECTTCC----EEEEECSSTT----CCEEEEEECSTTCEEE-EET--TT
T ss_pred cceEEECCCCC-EEEEccC-------CCEEEEEcCCCc----EEEEECCCCC----CCceEEEECCCCCEEE-ecc--CC
Confidence 44567899986 6555422 335888887322 1222 22111 3455678899997554 443 33
Q ss_pred eeEEEEecCCCeEEEE
Q 006979 325 WNLHKWIESNNEVLAI 340 (623)
Q Consensus 325 ~~L~~~d~~~~~~~~l 340 (623)
..|+++|+ +++.+.+
T Consensus 251 ~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 251 NQIGRITN-DNTIQEY 265 (300)
T ss_dssp TEEEEECT-TSCEEEE
T ss_pred CeEEEECC-CCcEEEE
Confidence 46888988 4554443
No 468
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=97.76 E-value=0.00011 Score=74.43 Aligned_cols=100 Identities=13% Similarity=0.172 Sum_probs=66.3
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHH-HHHHHhCCCCCCC
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSC-ATFLVGSGKADEK 574 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~-~~~l~~~~~~d~~ 574 (623)
|.|+++||... ....|...+..+ ..+|.|+.+|++|.+. ... .. ..++++.+. ++.+.+.. ..+
T Consensus 102 ~~l~~lhg~~~--~~~~~~~l~~~L-~~~~~v~~~d~~g~~~---~~~--~~-----~~~~~~a~~~~~~i~~~~--~~~ 166 (329)
T 3tej_A 102 PTLFCFHPASG--FAWQFSVLSRYL-DPQWSIIGIQSPRPNG---PMQ--TA-----ANLDEVCEAHLATLLEQQ--PHG 166 (329)
T ss_dssp CEEEEECCTTS--CCGGGGGGGGTS-CTTCEEEEECCCTTTS---HHH--HC-----SSHHHHHHHHHHHHHHHC--SSS
T ss_pred CcEEEEeCCcc--cchHHHHHHHhc-CCCCeEEEeeCCCCCC---CCC--CC-----CCHHHHHHHHHHHHHHhC--CCC
Confidence 67888999843 334555666666 5689999999998533 211 11 123333332 33333321 135
Q ss_pred ceEEEEcChHHHHHHHHh-c---CCCceeEEEecccCCCH
Q 006979 575 RLCITGGSAGGYTTLAAL-A---FRDTFKAGASLYGVSIP 610 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~---~~~~f~a~v~~~g~~d~ 610 (623)
++.++|||+||.++..++ . +++.++..|...+....
T Consensus 167 ~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~ 206 (329)
T 3tej_A 167 PYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPE 206 (329)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTH
T ss_pred CEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCC
Confidence 899999999999999888 6 89999999988776543
No 469
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.75 E-value=0.007 Score=60.88 Aligned_cols=205 Identities=10% Similarity=0.040 Sum_probs=104.5
Q ss_pred eEEEeCC-EEEEEeCCCCcEEEEeCCCCCCCceecCCC----C-CCCCeeecceeeCC-CCCEEEEEEeccCCCCCCcee
Q 006979 149 AFRIFGD-TVIFSNYKDQRLYKHSIDSKDSSPLPITPD----Y-GEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTT 221 (623)
Q Consensus 149 ~~~~s~d-~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~----~-~~~~~~~~d~~~sP-dG~~l~~v~~~~~~~~~~~~~ 221 (623)
..+++++ .+++++..+++|++++.++.......+... . ........+.+++| +|+ |+++.... ..
T Consensus 95 gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~-------~~ 166 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYC-------NS 166 (329)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSS-------CC
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCC-------CC
Confidence 3455544 688888777889999986430022333210 0 01112344678999 665 44433111 16
Q ss_pred EEEEEEcCCCCcccceeccc-CC---------CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEE
Q 006979 222 EIVAIALNGQNIQEPKVLVS-GS---------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC 291 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~-~~---------~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~ 291 (623)
.|++++.++.. ...+.. +. ......+++||+..|++.... ..+|.+++.+++. ....
T Consensus 167 ~I~~~~~~g~~---~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-------~~~I~~~~~~~G~---~~~~ 233 (329)
T 3fvz_A 167 RIVQFSPSGKF---VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-------NGRIQCFKTDTKE---FVRE 233 (329)
T ss_dssp EEEEECTTSCE---EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-------TTEEEEEETTTCC---EEEE
T ss_pred eEEEEcCCCCE---EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-------CCEEEEEECCCCc---EEEE
Confidence 79999966543 333321 11 113445799997778766532 4468899987542 2223
Q ss_pred EcCCCCCccccCcCceeCCCCcEEEEEeCC-----CCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEeec
Q 006979 292 VAGFDPTIVESPTEPKWSSKGELFFVTDRK-----NGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSH 365 (623)
Q Consensus 292 ~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~-----~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s 365 (623)
+...... ..+....++| | +++..+.. .+...++.++..+++...... ....+..| ..+.+.
T Consensus 234 ~~~~~~~--~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p------~~ia~~--- 300 (329)
T 3fvz_A 234 IKHASFG--RNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMP------HDIVAS--- 300 (329)
T ss_dssp ECCTTTT--TCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSE------EEEEEC---
T ss_pred EeccccC--CCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCe------eEEEEC---
Confidence 3221101 2334566777 4 33333320 123478888887776554432 11112111 233333
Q ss_pred CCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 366 GEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 366 ~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
++| .+|++...++ +|.++++++
T Consensus 301 ~dG-~lyvad~~~~--~I~~~~~~~ 322 (329)
T 3fvz_A 301 EDG-TVYIGDAHTN--TVWKFTLTE 322 (329)
T ss_dssp TTS-EEEEEESSSC--CEEEEEEEE
T ss_pred CCC-CEEEEECCCC--EEEEEeCCc
Confidence 254 6776654333 555555543
No 470
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.74 E-value=0.0022 Score=67.49 Aligned_cols=158 Identities=4% Similarity=-0.010 Sum_probs=92.8
Q ss_pred eEEEeC---CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 006979 149 AFRIFG---DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (623)
Q Consensus 149 ~~~~s~---d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~ 225 (623)
..++++ +.||+++.. ++|+++|++++ ..+.+... ..+-..++++++|++|++....... ....++.
T Consensus 141 ~lavdp~~~g~Lyv~d~~-~~I~~id~~~~--~v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~~----~~~~v~~ 209 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQ-HPTRLIDFEKE--YVSTVYSG----LSKVRTICWTHEADSMIITNDQNNN----DRPNNYI 209 (430)
T ss_dssp EEEEETTEEEEEEEEEBT-EEEEEEETTTT--EEEEEECC----CSCEEEEEECTTSSEEEEEECCSCT----TSEEEEE
T ss_pred EEEECCCCCCeEEEEeCC-CcEEEEECCCC--EEEEEecC----CCCcceEEEeCCCCEEEEEeCCCCc----ccceEEE
Confidence 345553 367777655 77999999875 45554432 3345568899999977665432211 1245777
Q ss_pred EEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcC
Q 006979 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (623)
Q Consensus 226 idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (623)
++.+++- ...+.+.. ........++|++.+|++..+. ..+|++++.+++. ...+..-.. . .....
T Consensus 210 ~~~~g~~-~~~~~l~~-~~~p~giavdp~~g~lyv~d~~-------~~~V~~~~~~~~~---~~~~~~~~~-~--~~P~g 274 (430)
T 3tc9_A 210 LTRESGF-KVITELTK-GQNCNGAETHPINGELYFNSWN-------AGQVFRYDFTTQE---TTPLFTIQD-S--GWEFH 274 (430)
T ss_dssp EEGGGTS-CSEEEEEE-CSSCCCEEECTTTCCEEEEETT-------TTEEEEEETTTTE---EEEEEECSS-S--SCCEE
T ss_pred EeCCCce-eeeeeecc-CCCceEEEEeCCCCEEEEEECC-------CCEEEEEECCCCc---EEEEEEcCC-C--Cccee
Confidence 7776543 11123332 2233456799955568877643 3469999987651 112222111 1 24567
Q ss_pred ceeCCCCcEEEEEeCCCCeeeEEEEecCC
Q 006979 306 PKWSSKGELFFVTDRKNGFWNLHKWIESN 334 (623)
Q Consensus 306 ~~ws~DG~l~~~~~~~~g~~~L~~~d~~~ 334 (623)
++|+|||+.+|+++. ...+|++++.++
T Consensus 275 ia~~pdG~~lyv~d~--~~~~I~~~~~d~ 301 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVV--NQHYILRSDYDW 301 (430)
T ss_dssp EEECTTSSEEEEEET--TTTEEEEEEEET
T ss_pred EEEcCCCCEEEEEEC--CCCEEEEEeCCc
Confidence 899999995555665 445677776654
No 471
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.72 E-value=0.00062 Score=65.69 Aligned_cols=195 Identities=9% Similarity=-0.015 Sum_probs=113.2
Q ss_pred CceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcEEEEe
Q 006979 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (623)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l~~~d 171 (623)
.++.++ ++.+|..... .|+ |...+..+|...+.+++.. +-+...++.+++|+.....++.++++|
T Consensus 58 qGL~~~-~~~Ly~stG~---~g~--v~~iD~~Tgkv~~~~l~~~---------~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGH---QGT--LRQLSLESAQPVWMERLGN---------IFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEEE-TTEEEEEETT---TTE--EEECCSSCSSCSEEEECTT---------CCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred ceEEEE-CCEEEEEcCC---CCE--EEEEECCCCcEEeEECCCC---------cceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 567777 7777776644 355 6677777653333333322 112335667788998888888999999
Q ss_pred CCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCC---Ccccc
Q 006979 172 IDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS---DFYAF 248 (623)
Q Consensus 172 ~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~---~~~~~ 248 (623)
+++. .....+... .. ...+++||++|+.. . . . ..|+++|.++.+......+.... .+.+.
T Consensus 123 ~~Tl-~~~~ti~~~----~e---GwGLt~Dg~~L~vS-d-G-s------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 123 GMPP-QRERTTRYS----GE---GWGLCYWNGKLVRS-D-G-G------TMLTFHEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp TTTT-EEEEEEECS----SC---CCCEEEETTEEEEE-C-S-S------SEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred CCcC-cEEEEEeCC----Cc---eeEEecCCCEEEEE-C-C-C------CEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence 9876 233444432 11 12356788876554 3 2 1 67999999987632112222221 23344
Q ss_pred eeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcC---------CCCCccccCcCceeCCCCcEEEEEe
Q 006979 249 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG---------FDPTIVESPTEPKWSSKGELFFVTD 319 (623)
Q Consensus 249 p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ws~DG~l~~~~~ 319 (623)
.+|. || +|+...|. ..+|.++|.+++..+ ...-+.+ .+.. .-...++|+|+++.+|++.
T Consensus 186 Le~~-dG-~lyanvw~-------s~~I~vIDp~TG~V~-~~Idl~~L~~~~~~~~~~~~--~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 186 LECA-NG-VIYANIWH-------SSDVLEIDPATGTVV-GVIDASALTRAVAGQVTNPE--AVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEE-TT-EEEEEETT-------CSEEEEECTTTCBEE-EEEECHHHHHHHTTTCCCTT--CCEEEEEECTTTCCEEEEE
T ss_pred cEEe-CC-EEEEEECC-------CCeEEEEeCCCCcEE-EEEECCCCcccccccccCcC--CceEEEEEcCCCCEEEEeC
Confidence 5676 77 46655443 346999998877421 1111111 1101 2446789999988556665
Q ss_pred CCCCeeeEEEEec
Q 006979 320 RKNGFWNLHKWIE 332 (623)
Q Consensus 320 ~~~g~~~L~~~d~ 332 (623)
. -|-.||.+.+
T Consensus 254 K--~Wp~~~ev~~ 264 (268)
T 3nok_A 254 K--LWPRLFEVRL 264 (268)
T ss_dssp T--TCSEEEEEEE
T ss_pred C--CCCceEEEEE
Confidence 4 5667876643
No 472
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.0013 Score=69.82 Aligned_cols=163 Identities=6% Similarity=0.020 Sum_probs=95.5
Q ss_pred CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceee-------CCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 006979 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF-------DPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (623)
Q Consensus 155 d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~-------sPdG~~l~~v~~~~~~~~~~~~~~L~~id 227 (623)
+.|++.....+.|+++|++++ ..+.|.........+..++.| +++|++|++....... . .....+++++
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~--~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~-~-~~~~~V~~i~ 227 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNR--MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK-G-DESPSVYIIK 227 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTT--EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT-G-GGEEEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCC--EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC-c-ccCceEEEEe
Confidence 367777655567999999876 555544331111234556778 9999977665443211 0 1235688887
Q ss_pred cCC-CCccc-c--eecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEec-------CCCc---e--e----
Q 006979 228 LNG-QNIQE-P--KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-------ENGD---V--Y---- 287 (623)
Q Consensus 228 l~~-g~~~~-~--~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~-------~~~~---~--~---- 287 (623)
.+. |.... . +.+.. .......+.+|++++|++..+. ..+|+++|++ ++.. . .
T Consensus 228 r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~-------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 228 RNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYE-------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp CCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETT-------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred cCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECC-------CCEEEEEecccccccccCceeecccccccccc
Confidence 655 33211 0 23332 2233456789988889888743 3469999997 4421 0 0
Q ss_pred eeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCC
Q 006979 288 KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN 334 (623)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~ 334 (623)
...+..-.+ . .....++|+|+|+.+|+++. +..+|++++.++
T Consensus 300 ~~~l~~~~~-~--~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg 341 (496)
T 3kya_A 300 FKQLFTIAD-P--SWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDE 341 (496)
T ss_dssp EEEEEECSS-S--SCCEEEEECTTSSEEEEEET--TTTEEEEEEEET
T ss_pred cceeEecCC-C--CCceEEEEcCCCCEEEEEeC--CCCEEEEEecCC
Confidence 112222211 1 23457899999996677776 566888876544
No 473
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.69 E-value=0.0067 Score=57.84 Aligned_cols=195 Identities=12% Similarity=0.097 Sum_probs=110.3
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCC
Q 006979 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (623)
Q Consensus 192 ~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~ 271 (623)
+...+.|++ +.|+......+ .+.|.++|+++|++ .+.+.-+.. +......++|++|+.+.|.
T Consensus 22 ftqGL~~~~--~~LyestG~~g------~S~v~~vD~~tgkv--~~~~~l~~~-~fgeGi~~~~~~ly~ltw~------- 83 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETG------RSSVRKVDLETGRI--LQRAEVPPP-YFGAGIVAWRDRLIQLTWR------- 83 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTT------SCEEEEEETTTCCE--EEEEECCTT-CCEEEEEEETTEEEEEESS-------
T ss_pred ccccEEEEC--CEEEEECCCCC------CceEEEEECCCCCE--EEEEeCCCC-cceeEEEEeCCEEEEEEee-------
Confidence 334466765 45555443322 26899999999984 222322222 2224466788999887754
Q ss_pred ceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeE-EEEeecc--cccc
Q 006979 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLD--AEFS 348 (623)
Q Consensus 272 ~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~-~~l~~~~--~~~~ 348 (623)
...++++|.++.. ....+.-.. .....++||+.+|+++. ...|+.+|+++.+. +.+.-.. ..+.
T Consensus 84 ~~~v~v~D~~tl~---~~~ti~~~~-------~Gwglt~dg~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 84 NHEGFVYDLATLT---PRARFRYPG-------EGWALTSDDSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp SSEEEEEETTTTE---EEEEEECSS-------CCCEEEECSSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CCEEEEEECCcCc---EEEEEeCCC-------CceEEeeCCCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 4569999998763 222222211 13344567886667763 45799999998764 3333221 1111
Q ss_pred cccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccC------------Cc-ceEee--eecCCE
Q 006979 349 RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIP------------FT-DIDNI--TLGNDC 412 (623)
Q Consensus 349 ~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~------------~~-~v~~~--~~~~~~ 412 (623)
..+.+.+. + +.+|... -....|.++|+.+|++. .+... .. ...++ ++++++
T Consensus 151 ------~lNeLe~~----~-G~lyanv--w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 151 ------NLNELEWV----N-GELLANV--WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp ------CEEEEEEE----T-TEEEEEE--TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred ------cceeeEEe----C-CEEEEEE--CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 11223332 3 4566433 23448999999998875 33311 11 23444 667888
Q ss_pred EEEEEecCCCCCeEEEEEcCC
Q 006979 413 LFVEGASGVEPSSVAKVTLDD 433 (623)
Q Consensus 413 ~~~~~~s~~~~~~ly~~~l~~ 433 (623)
+++++- .-+.+|.+.+..
T Consensus 218 lfVTGK---~wp~~~~v~~~~ 235 (243)
T 3mbr_X 218 LFVTGK---RWPMLYEIRLTP 235 (243)
T ss_dssp EEEEET---TCSEEEEEEECC
T ss_pred EEEECC---CCCcEEEEEEec
Confidence 887763 336788877643
No 474
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.68 E-value=0.0058 Score=64.27 Aligned_cols=157 Identities=12% Similarity=0.047 Sum_probs=89.6
Q ss_pred eEEEeC----CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 006979 149 AFRIFG----DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 149 ~~~~s~----d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
..++++ +.|++.+.. ++|++++++++ ..+.+... ..+...++++|+|+ |+++...... ....++
T Consensus 143 gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g--~v~~~~~~----~~~P~giavd~dG~-lyVad~~~~~----~~~gv~ 210 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQ--YVDIKTTN----IGQCADVNFTLNGD-MVVVDDQSSD----TNTGIY 210 (433)
T ss_dssp EEEECTTTTTCEEEEECBT-SCEEEEETTTT--EEEEECCC----CSCEEEEEECTTCC-EEEEECCSCT----TSEEEE
T ss_pred eEEEccccCCCEEEEEeCC-CCEEEEECCCC--EEEEeecC----CCCccEEEECCCCC-EEEEcCCCCc----ccceEE
Confidence 345554 477777655 78999999766 55555432 33456788999999 5554332111 124567
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCc
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (623)
.++..++.. ....+. ........+++|++..|++..+. ..+|++++.+++.. ...+..... . ....
T Consensus 211 ~~~~~~~~~-~~~~~~-~~~~P~giavd~~~G~lyv~d~~-------~~~V~~~d~~~g~~--~~~~~~~~~-~--~~~~ 276 (433)
T 4hw6_A 211 LFTRASGFT-ERLSLC-NARGAKTCAVHPQNGKIYYTRYH-------HAMISSYDPATGTL--TEEEVMMDT-K--GSNF 276 (433)
T ss_dssp EECGGGTTC-CEEEEE-ECSSBCCCEECTTTCCEEECBTT-------CSEEEEECTTTCCE--EEEEEECSC-C--SSCE
T ss_pred EEECCCCee-cccccc-ccCCCCEEEEeCCCCeEEEEECC-------CCEEEEEECCCCeE--EEEEeccCC-C--CCcc
Confidence 776655431 012222 12233456799955557766422 34699998875421 022222221 1 1223
Q ss_pred CceeCCCCcEEEEEeCCCCeeeEEEEecC
Q 006979 305 EPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (623)
Q Consensus 305 ~~~ws~DG~l~~~~~~~~g~~~L~~~d~~ 333 (623)
.++|+|||+.+|+++. +..+|++++.+
T Consensus 277 ~ia~dpdG~~LYvad~--~~~~I~~~~~d 303 (433)
T 4hw6_A 277 HIVWHPTGDWAYIIYN--GKHCIYRVDYN 303 (433)
T ss_dssp EEEECTTSSEEEEEET--TTTEEEEEEBC
T ss_pred cEEEeCCCCEEEEEeC--CCCEEEEEeCC
Confidence 5899999995556665 45578887765
No 475
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.66 E-value=0.0018 Score=65.43 Aligned_cols=156 Identities=11% Similarity=-0.006 Sum_probs=89.1
Q ss_pred cCCccCceEEcC-C--CcEEEEeecCCCCCceEEEEcCCCCCCCCc-ccCCCCCccceeeeecCCceEEEeCC-EEEEEe
Q 006979 87 ASKRLGGTAVDG-H--GRLIWLESRPTEAGRGVLVKEPAKAGDEPS-DITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSN 161 (623)
Q Consensus 87 ~~~~~~~~~~~~-~--~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~-~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~ 161 (623)
....+..+.|+| + +.+...-.. +|...+|..... +... ..+. .|...+.+..++++ ..+++.
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~---dg~i~iw~~~~~--~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSW---ANDVRCWEVQDS--GQTIPKAQQ--------MHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEET---TSEEEEEEECTT--SCEEEEEEE--------ECSSCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEECC---CCcEEEEEcCCC--CceeEEEec--------cccCCEEEEEECcCCCEEEEE
Confidence 345677889998 4 465555433 477777776542 1211 1111 12223455666655 455566
Q ss_pred CCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceee--CCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceec
Q 006979 162 YKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF--DPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL 239 (623)
Q Consensus 162 ~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~--sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l 239 (623)
..++.|.++|+.++ ....+... ........| +|+++.++....+ ..|.++|+.+++. ...+
T Consensus 105 ~~dg~v~iwd~~~~--~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~vwd~~~~~~--~~~~ 167 (368)
T 3mmy_A 105 SCDKTAKMWDLSSN--QAIQIAQH----DAPVKTIHWIKAPNYSCVMTGSWD---------KTLKFWDTRSSNP--MMVL 167 (368)
T ss_dssp ETTSEEEEEETTTT--EEEEEEEC----SSCEEEEEEEECSSCEEEEEEETT---------SEEEEECSSCSSC--SEEE
T ss_pred cCCCcEEEEEcCCC--Cceeeccc----cCceEEEEEEeCCCCCEEEEccCC---------CcEEEEECCCCcE--EEEE
Confidence 67888999999876 44333322 334566778 9999877765543 5689999988762 2333
Q ss_pred ccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC
Q 006979 240 VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN 283 (623)
Q Consensus 240 ~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~ 283 (623)
... .......++ +..++....+ ..+.++++...
T Consensus 168 ~~~-~~~~~~~~~--~~~~~~~~~~--------~~i~~~~~~~~ 200 (368)
T 3mmy_A 168 QLP-ERCYCADVI--YPMAVVATAE--------RGLIVYQLENQ 200 (368)
T ss_dssp ECS-SCEEEEEEE--TTEEEEEEGG--------GCEEEEECSSS
T ss_pred ecC-CCceEEEec--CCeeEEEeCC--------CcEEEEEeccc
Confidence 322 222223343 4455544422 23777787765
No 476
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.0019 Score=69.46 Aligned_cols=198 Identities=8% Similarity=-0.021 Sum_probs=118.2
Q ss_pred CCccCceEEcC-CCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCC-EEEEEeCCCC
Q 006979 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQ 165 (623)
Q Consensus 88 ~~~~~~~~~~~-~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d-~l~f~~~~~~ 165 (623)
...+..+.||| |..+.-.. .+|...+|.. . .....+.....+ .+.+..++++++| ..+++...++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s----~dg~V~iwd~--~---~~l~~l~~~~~~----~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLS----NNGNVSVFKD--N---KMLTNLDSKGNL----SSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEE----TTSCEEEEET--T---EEEEECCCSSCS----TTTCEEEEEECSSSSCEEEEETTS
T ss_pred CCcEEEEEECCCCCEEEEEe----CCCcEEEEeC--C---ceeeeccCCCcc----ccccEEEEEEcCCCCEEEEEcCCC
Confidence 34567899999 77776443 2366666641 1 111111111000 0112446777777 5666777889
Q ss_pred cEEEEeCCCCCCCc--------eecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcc-cc
Q 006979 166 RLYKHSIDSKDSSP--------LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ-EP 236 (623)
Q Consensus 166 ~l~~~d~~~g~~~~--------~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~-~~ 236 (623)
.|-++++.++ .. ..+..........+...+||||| ++....| +.++++|++++... ..
T Consensus 152 tVkIWd~~~~--~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D---------~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 152 ELQFFSIRKN--SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN---------NSVFSMTVSASSHQPVS 218 (588)
T ss_dssp EEEEEECCCC--TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT---------CCEEEECCCSSSSCCCE
T ss_pred EEEEEECCCC--ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC---------CeEEEEECCCCccccce
Confidence 9999999876 32 23321100112346678999999 5554443 45888898877621 11
Q ss_pred eecccC-CCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCcee--CCCCc
Q 006979 237 KVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW--SSKGE 313 (623)
Q Consensus 237 ~~l~~~-~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~w--s~DG~ 313 (623)
+.+..+ ...+...+|| |++|+-.. + ..|.++++.++. ......+.. ..+..+.+ +|||+
T Consensus 219 ~tL~~~h~~~V~svaFs--g~~LASa~-~--------~tIkLWd~~~~~---~~~~~~gh~----~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 219 RMIQNASRRKITDLKIV--DYKVVLTC-P--------GYVHKIDLKNYS---ISSLKTGSL----ENFHIIPLNHEKEST 280 (588)
T ss_dssp EEEECCCSSCCCCEEEE--TTEEEEEC-S--------SEEEEEETTTTE---EEEEECSCC----SCCCEEEETTCSSCE
T ss_pred eeecccccCcEEEEEEE--CCEEEEEe-C--------CeEEEEECCCCe---EEEEEcCCC----ceEEEEEeeeCCCCC
Confidence 234323 3457778899 68787553 2 258899988761 223333544 56778899 99998
Q ss_pred EEEEEeCCCCeeeEEEEe
Q 006979 314 LFFVTDRKNGFWNLHKWI 331 (623)
Q Consensus 314 l~~~~~~~~g~~~L~~~d 331 (623)
.+.++.. +|. +||..|
T Consensus 281 ~La~a~e-dG~-klw~~d 296 (588)
T 2j04_A 281 ILLMSNK-TSY-KVLLED 296 (588)
T ss_dssp EEEECSS-CEE-EEEESS
T ss_pred EEEEEcC-CCC-EEEeec
Confidence 7767776 677 888876
No 477
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.60 E-value=0.00042 Score=66.61 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=85.5
Q ss_pred EEEeecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccC-cC----------------CHHhHHHHcCce
Q 006979 463 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-IL----------------NLSIQYWTSRGW 525 (623)
Q Consensus 463 ~i~~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~-~~----------------~~~~~~~a~~G~ 525 (623)
.+.+... .+..+..|++...+. ....|++|+++|||+..... .+ .....-|.+. .
T Consensus 23 y~~v~~~-~~~~lFywf~es~~~------~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-a 94 (255)
T 1whs_A 23 YITVDEG-AGRSLFYLLQEAPED------AQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKV-A 94 (255)
T ss_dssp EEEEETT-TTEEEEEEEECCCGG------GCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGT-S
T ss_pred EEECCCC-CCcEEEEEEEEecCC------CCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccccc-C
Confidence 4555544 577888888876531 35679999999999755432 10 0112224443 6
Q ss_pred EEEEECC-CCCCCCchhHHHhhccCCc-cchHHHHHHHHH-HHHhCCCCCCCceEEEEcChHHHHHHHHhc----C---C
Q 006979 526 AFVDVNY-GGSTGYGREFRERLLGRWG-IVDVNDCCSCAT-FLVGSGKADEKRLCITGGSAGGYTTLAALA----F---R 595 (623)
Q Consensus 526 ~v~~~d~-rGs~~~g~~~~~~~~~~~g-~~~~~D~~~~~~-~l~~~~~~d~~rv~i~G~S~GG~~~~~~~~----~---~ 595 (623)
.++-+|. .|.| +...-.......++ ....+|+...++ |+.+.+.....++.|.|.||||..+-.++. + .
T Consensus 95 nvlfiDqPvGtG-fSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~ 173 (255)
T 1whs_A 95 NVLFLDSPAGVG-FSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPV 173 (255)
T ss_dssp EEEEECCSTTST-TCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSS
T ss_pred CEEEEecCCCCc-cCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcc
Confidence 8899995 4543 32211110000112 123455555554 445555555678999999999999876662 1 1
Q ss_pred CceeEEEecccCCCHHH
Q 006979 596 DTFKAGASLYGVSIPVI 612 (623)
Q Consensus 596 ~~f~a~v~~~g~~d~~~ 612 (623)
=-+++++...|+.|...
T Consensus 174 inLkGi~ign~~~d~~~ 190 (255)
T 1whs_A 174 INLKGFMVGNGLIDDYH 190 (255)
T ss_dssp CEEEEEEEEEECCBHHH
T ss_pred cccceEEecCCccCHHH
Confidence 35899999999998754
No 478
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=97.59 E-value=0.00028 Score=68.08 Aligned_cols=89 Identities=12% Similarity=-0.060 Sum_probs=62.4
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|.||++||.+. ....|...+..+. .+|.|+.+|++|.+ ...+|+.+.++.+.. .+
T Consensus 22 ~~~l~~~hg~~~--~~~~~~~~~~~l~-~~~~v~~~d~~g~~----------------~~~~~~~~~i~~~~~-----~~ 77 (244)
T 2cb9_A 22 GKNLFCFPPISG--FGIYFKDLALQLN-HKAAVYGFHFIEED----------------SRIEQYVSRITEIQP-----EG 77 (244)
T ss_dssp SSEEEEECCTTC--CGGGGHHHHHHTT-TTSEEEEECCCCST----------------THHHHHHHHHHHHCS-----SS
T ss_pred CCCEEEECCCCC--CHHHHHHHHHHhC-CCceEEEEcCCCHH----------------HHHHHHHHHHHHhCC-----CC
Confidence 357888999843 3345666666665 58999999999831 124566666655421 35
Q ss_pred ceEEEEcChHHHHHHHHh-cC---CCceeEEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AF---RDTFKAGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~---~~~f~a~v~~~g~ 607 (623)
++.++|||+||.+++.++ .. ++.++..|...+.
T Consensus 78 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~ 114 (244)
T 2cb9_A 78 PYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAY 114 (244)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCC
Confidence 799999999999999888 43 5778887776654
No 479
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0026 Score=73.60 Aligned_cols=199 Identities=9% Similarity=-0.070 Sum_probs=111.3
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCc
Q 006979 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 272 (623)
Q Consensus 193 ~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~ 272 (623)
....+|||||++|+....+ ..|.+++..+++ ..........+...+||| |++|+-...|
T Consensus 20 V~~lafspdg~~lAsgs~D---------g~I~lw~~~~~~---~~~~~~~~~~V~~l~fsp-g~~L~S~s~D-------- 78 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVT---------GEVHIYGQQQVE---VVIKLEDRSAIKEMRFVK-GIYLVVINAK-------- 78 (902)
T ss_dssp EEEEEEETTTTEEEEEETT---------SEEEEECSTTCE---EEEECSSCCCEEEEEEET-TTEEEEEETT--------
T ss_pred cEEEEECCCCCEEEEEeCC---------CEEEEEeCCCcE---EEEEcCCCCCEEEEEEcC-CCEEEEEECc--------
Confidence 5568899999988776554 468888887664 322223334466788999 8877766533
Q ss_pred eEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecc-----ccc
Q 006979 273 AELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD-----AEF 347 (623)
Q Consensus 273 ~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~-----~~~ 347 (623)
..|.+.|+.++.. ...+. .. ..+....|+|||++++.... +|. |..+|..+++........ ...
T Consensus 79 ~~v~lWd~~~~~~---~~~~~-~~----~~V~~v~~sp~g~~l~sgs~-dg~--V~lwd~~~~~~~~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 79 DTVYVLSLYSQKV---LTTVF-VP----GKITSIDTDASLDWMLIGLQ-NGS--MIVYDIDRDQLSSFKLDNLQKSSFFP 147 (902)
T ss_dssp CEEEEEETTTCSE---EEEEE-CS----SCEEEEECCTTCSEEEEEET-TSC--EEEEETTTTEEEEEEECCHHHHHTCS
T ss_pred CeEEEEECCCCcE---EEEEc-CC----CCEEEEEECCCCCEEEEEcC-CCc--EEEEECCCCccccceecccccccccc
Confidence 3488889887632 22222 22 35678899999996655554 454 555677777643221100 000
Q ss_pred -ccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCCcee-ecccC------------------CcceEee-
Q 006979 348 -SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIP------------------FTDIDNI- 406 (623)
Q Consensus 348 -~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~~~~-~lt~~------------------~~~v~~~- 406 (623)
+.. .....+.|. |++..++++...+|. + ++|+.+++.. .+... ...+..+
T Consensus 148 ~~h~---~~V~sl~~s---p~~~~~l~~g~~dg~--v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 148 AARL---SPIVSIQWN---PRDIGTVLISYEYVT--L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp SSCC---CCCCEEEEE---TTEEEEEEEECSSCE--E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred ccCC---CCeEEEEEc---cCCCCEEEEEeCCCc--E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 000 011233443 255455555555554 4 5677766543 23211 1235444
Q ss_pred -eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 407 -TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 407 -~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
++++..++ +++.. ..|...|+.+++.
T Consensus 219 fspdg~~la-sgs~D---g~i~lWd~~~g~~ 245 (902)
T 2oaj_A 219 YHPNSLHII-TIHED---NSLVFWDANSGHM 245 (902)
T ss_dssp ECTTSSEEE-EEETT---CCEEEEETTTCCE
T ss_pred EcCCCCEEE-EEECC---CeEEEEECCCCcE
Confidence 56665444 44332 3577778877653
No 480
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.55 E-value=0.01 Score=58.54 Aligned_cols=241 Identities=7% Similarity=-0.036 Sum_probs=124.9
Q ss_pred ccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCcccCCCCCccceeeeecCCceEEEeCCEEEEEeCCCCcEEE
Q 006979 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (623)
Q Consensus 90 ~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~~l~p~~~~~r~~~~~~g~~~~~~s~d~l~f~~~~~~~l~~ 169 (623)
.+..+.++|++.....-. .+|...+|..... +....+.. |......+...+. ++++...++.+..
T Consensus 69 ~V~~v~~~~~~~~l~sgs---~Dg~v~iw~~~~~---~~~~~~~~--------h~~~~~~~~~~~~-~l~s~~~~~~~~~ 133 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGT---SSAEVQLWDVQQQ---KRLRNMTS--------HSARVGSLSWNSY-ILSSGSRSGHIHH 133 (318)
T ss_dssp CEEEEEECTTSSEEEEEE---TTSEEEEEETTTT---EEEEEEEC--------CSSCEEEEEEETT-EEEEEETTSEEEE
T ss_pred eEEEEEECCCCCEEEEEE---CCCcEEEeecCCc---eeEEEecC--------ccceEEEeecCCC-EEEEEecCCceEe
Confidence 356778887333333332 2466666654322 21111110 1111223444444 4445556666777
Q ss_pred EeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCCccc--ceecccCCCccc
Q 006979 170 HSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE--PKVLVSGSDFYA 247 (623)
Q Consensus 170 ~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~--~~~l~~~~~~~~ 247 (623)
++...+......+... ........++++|+.++....+ ..+.+.|+.+++... ..........+.
T Consensus 134 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 200 (318)
T 4ggc_A 134 HDVRVAEHHVATLSGH----SQEVCGLRWAPDGRHLASGGND---------NLVNVWPSAPGEGGWVPLQTFTQHQGAVK 200 (318)
T ss_dssp EETTSSSCEEEEEECC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEESSCBTTBSCCSEEECCCCSCEE
T ss_pred eecCCCceeEEEEcCc----cCceEEEEEcCCCCEEEEEecC---------cceeEEECCCCcccccceeeecccCCceE
Confidence 7766541111222221 2334557799999988766554 447788988764210 111122223345
Q ss_pred ceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCc-EEEEEeCCCCeee
Q 006979 248 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN 326 (623)
Q Consensus 248 ~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~-l~~~~~~~~g~~~ 326 (623)
...|+|++..++++..... ...|.+.+..... ...... .. ..+....|+++++ ++..+.. ....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-----~~~i~lwd~~~~~---~~~~~~-~~----~~v~~~~~~~~~~~~~~~sg~--~d~~ 265 (318)
T 4ggc_A 201 AVAWCPWQSNVLATGGGTS-----DRHIRIWNVCSGA---CLSAVD-AH----SQVCSILWSPHYKELISGHGF--AQNQ 265 (318)
T ss_dssp EEEECTTSTTEEEEEECTT-----TCEEEEEETTTCC---EEEEEE-CS----SCEEEEEEETTTTEEEEEECT--TTCC
T ss_pred EEEecCCCCcEEEEEecCC-----CCEEEEEeccccc---cccccc-ce----eeeeeeeecccccceEEEEEc--CCCE
Confidence 5679999888876653332 3457777876652 222222 22 3455778999988 5555433 2235
Q ss_pred EEEEecCCCeEEE-EeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 327 LHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 327 L~~~d~~~~~~~~-l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
|..+|..+++... +......+....|+ |+++. +++...+|.-+||.+
T Consensus 266 i~iwd~~~~~~~~~l~gH~~~V~~l~~s------------pdg~~-l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 266 LVIWKYPTMAKVAELKGHTSRVLSLTMS------------PDGAT-VASAAADETLRLWRC 313 (318)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEEC------------TTSSC-EEEEETTTEEEEECC
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEc------------CCCCE-EEEEecCCeEEEEEC
Confidence 6677877776433 33222233333333 26654 456667887777643
No 481
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=97.54 E-value=0.00027 Score=67.29 Aligned_cols=87 Identities=10% Similarity=-0.003 Sum_probs=61.2
Q ss_pred CEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCc
Q 006979 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKR 575 (623)
Q Consensus 496 Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~r 575 (623)
|.|+++||.+. ....|......+.+ |.|+.+|++|.+ . ..+|+.+.++.+.. .++
T Consensus 18 ~~l~~~hg~~~--~~~~~~~~~~~l~~--~~v~~~d~~g~~---~-------------~~~~~~~~i~~~~~-----~~~ 72 (230)
T 1jmk_C 18 QIIFAFPPVLG--YGLMYQNLSSRLPS--YKLCAFDFIEEE---D-------------RLDRYADLIQKLQP-----EGP 72 (230)
T ss_dssp EEEEEECCTTC--CGGGGHHHHHHCTT--EEEEEECCCCST---T-------------HHHHHHHHHHHHCC-----SSC
T ss_pred CCEEEECCCCC--chHHHHHHHHhcCC--CeEEEecCCCHH---H-------------HHHHHHHHHHHhCC-----CCC
Confidence 67888999843 33456666777754 999999999732 1 13466666665532 257
Q ss_pred eEEEEcChHHHHHHHHh-cC---CCceeEEEecccC
Q 006979 576 LCITGGSAGGYTTLAAL-AF---RDTFKAGASLYGV 607 (623)
Q Consensus 576 v~i~G~S~GG~~~~~~~-~~---~~~f~a~v~~~g~ 607 (623)
+.++|||+||.+++.++ .. ++.++..|...+.
T Consensus 73 ~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~ 108 (230)
T 1jmk_C 73 LTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY 108 (230)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred eEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence 99999999999999887 43 4668877776543
No 482
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.49 E-value=0.0028 Score=64.20 Aligned_cols=252 Identities=15% Similarity=0.097 Sum_probs=0.0
Q ss_pred cccccccCCCCCCCCCCCCCccccCCCCCCCcCCHHHHhccCCccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCC
Q 006979 47 GCKIMASTSPVPETYSATQDKITAPYGSWKSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGD 126 (623)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~w~s~~t~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg 126 (623)
|.|...+++++..+..++ .+.-+++.+...-..+.++.+.|++++|..+ .....|++.+..+|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~va~gL~~P~~ia~~pdG~llVte-----r~~G~I~~v~~~~g~ 64 (347)
T 3das_A 1 GAMSSPAGSPTEQAPPAK-----------GSVKVLRTVATGLNSPWGLAPLPGGDLLVSS-----RDEATITRVDAKTGR 64 (347)
T ss_dssp -------------CCCSS-----------CCEEEEEEEECCCSSEEEEEECTTSCEEEEE-----TTTCEEEEECTTTCC
T ss_pred CCccCCCCCCCCCCCCcc-----------CCCceeEEeecCCCCceEEEEcCCCcEEEEE-----ecCCEEEEEECCCCc
Q ss_pred CCcc-----cCCCCCccceeeeecCCceEEEeCC-------EEEEEeCCCCcEEEEeCCC---------CCCCceecCCC
Q 006979 127 EPSD-----ITPKEYAVRTTAQEYGGGAFRIFGD-------TVIFSNYKDQRLYKHSIDS---------KDSSPLPITPD 185 (623)
Q Consensus 127 ~~~~-----l~p~~~~~r~~~~~~g~~~~~~s~d-------~l~f~~~~~~~l~~~d~~~---------g~~~~~~Lt~~ 185 (623)
.... +.... +.|...+++++| .++++....++|+++.++. . ....++..
T Consensus 65 ~~~v~~~~~v~~~g--------~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~--~~~i~~~~ 134 (347)
T 3das_A 65 KTELGEVPGVSPSG--------EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGA--PDTVFRGI 134 (347)
T ss_dssp EEEEEECTTCCCBT--------TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCC--CEEEEEEE
T ss_pred EeeecccCceeecC--------CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCC--cEEEEEcC
Q ss_pred CCCCCeeecceeeCCCCCEEEEEEeccCC-----CCCCceeEEEEEEcCCC--------CcccceecccCCCcccceeeC
Q 006979 186 YGEPLVSYADGIFDPRFNRYVTVREDRRQ-----DALNSTTEIVAIALNGQ--------NIQEPKVLVSGSDFYAFPRMD 252 (623)
Q Consensus 186 ~~~~~~~~~d~~~sPdG~~l~~v~~~~~~-----~~~~~~~~L~~idl~~g--------~~~~~~~l~~~~~~~~~p~wS 252 (623)
.......-..+.|+||| +|++..-+... ........|++++.++. . .+....+.......+|.
T Consensus 135 p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~---~~i~a~G~RNp~Gla~d 210 (347)
T 3das_A 135 PKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPG---SPVYSYGHRNVQGLAWD 210 (347)
T ss_dssp CCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTT---CCEEEBCCSBCCEEEEC
T ss_pred CCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCC---CeEEeeCCCCcceEEEC
Q ss_pred CCCCEEEEEEecCCCC-----------------------------------------------------CCCceEEEEEE
Q 006979 253 PRGERMAWIEWHHPNM-----------------------------------------------------PWDKAELWVGY 279 (623)
Q Consensus 253 PDG~~la~~~~~~~~~-----------------------------------------------------p~~~~~L~v~d 279 (623)
|+|+ |++........ .+...+|+.+.
T Consensus 211 p~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~ 289 (347)
T 3das_A 211 DKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIP 289 (347)
T ss_dssp TTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEE
T ss_pred CCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEE
Q ss_pred ecCCCc-eeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCC-------eeeEEEEecC
Q 006979 280 ISENGD-VYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG-------FWNLHKWIES 333 (623)
Q Consensus 280 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g-------~~~L~~~d~~ 333 (623)
++.++. .....++.+.. ..+..+...|||.||+..+..+| .-+|+++.+.
T Consensus 290 ~~~~~~~~~~e~~l~~~~----gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~~ 347 (347)
T 3das_A 290 LKGTAAAADPQAFLEGEY----GRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEVE 347 (347)
T ss_dssp EETTEESSCCEEESTTTS----SCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEEC
T ss_pred ecCCceecceEEeecCCC----CCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeCC
No 483
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.49 E-value=0.038 Score=61.65 Aligned_cols=85 Identities=11% Similarity=-0.006 Sum_probs=47.2
Q ss_pred cceeeCCCCCEEEEEEeccCC----------CCCCceeEEEEEEcCCCCcccceecccCC----CcccceeeCC---CCC
Q 006979 194 ADGIFDPRFNRYVTVREDRRQ----------DALNSTTEIVAIALNGQNIQEPKVLVSGS----DFYAFPRMDP---RGE 256 (623)
Q Consensus 194 ~d~~~sPdG~~l~~v~~~~~~----------~~~~~~~~L~~idl~~g~~~~~~~l~~~~----~~~~~p~wSP---DG~ 256 (623)
..+.++|+++.|++...+... ..+.....|+.+|+++|+.....++.... +....|.... ||+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 356789999877765543211 11111246999999999843323333221 2234455443 785
Q ss_pred --EEEEEEecCCCCCCCceEEEEEEecCCCc
Q 006979 257 --RMAWIEWHHPNMPWDKAELWVGYISENGD 285 (623)
Q Consensus 257 --~la~~~~~~~~~p~~~~~L~v~d~~~~~~ 285 (623)
.+++.. +. ...||++|..++..
T Consensus 326 ~~~~l~~~-~~------~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 326 PRKVILHA-PK------NGFFFVLDRTNGKF 349 (677)
T ss_dssp EEEEEEEC-CT------TSEEEEEETTTCCE
T ss_pred EeeEEEEE-CC------CCEEEEEECCCCCE
Confidence 344443 22 34699999887743
No 484
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.46 E-value=0.0015 Score=66.35 Aligned_cols=202 Identities=12% Similarity=0.066 Sum_probs=106.3
Q ss_pred CccCceEEcCCCcEEEEeecCCCCCceEEEEcCCCCCCCCc-cc-CCCCCccceeeeecCCceEEEeC--CEEEEEeC--
Q 006979 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPS-DI-TPKEYAVRTTAQEYGGGAFRIFG--DTVIFSNY-- 162 (623)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~e~g~~~l~~~~~~~gg~~~-~l-~p~~~~~r~~~~~~g~~~~~~s~--d~l~f~~~-- 162 (623)
..+.++.+++.++||+++......+...|++++..+| +.. .+ ++..... .......++++. +.+|+++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg-~~~~~~~~~~~~~~----~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN-QLSRVIYLPPPITL----SNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT-EEEEEEECCTTTSC----TTCCCCEEEEETTTTEEEEEECCS
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC-eEEEEEECChhhcc----cccccceEEEecCCCEEEEEcCcc
Confidence 4566888887778999985410001234777776533 311 11 2222100 001123455653 47777776
Q ss_pred -CCCcEEEEeCCCCCCCcee-cCCC-CCCC--------C----------------eeecceeeCCCCCEEEEEEeccCCC
Q 006979 163 -KDQRLYKHSIDSKDSSPLP-ITPD-YGEP--------L----------------VSYADGIFDPRFNRYVTVREDRRQD 215 (623)
Q Consensus 163 -~~~~l~~~d~~~g~~~~~~-Lt~~-~~~~--------~----------------~~~~d~~~sPdG~~l~~v~~~~~~~ 215 (623)
.++.|+++|++++ ...+ +... .-.+ . ...+..+|||||+.|++.....
T Consensus 142 ~~~~~i~v~d~~~g--~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~--- 216 (343)
T 2qe8_A 142 DDKAALIRVDLQTG--LAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS--- 216 (343)
T ss_dssp GGGCEEEEEETTTC--CEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC---
T ss_pred CCCCeEEEEECCCC--CEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC---
Confidence 5667999999866 3333 3210 0000 0 1124577999999887764422
Q ss_pred CCCceeEEEEEEcCC---CCccc------ceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCce
Q 006979 216 ALNSTTEIVAIALNG---QNIQE------PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 286 (623)
Q Consensus 216 ~~~~~~~L~~idl~~---g~~~~------~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~ 286 (623)
..||+++.+. +.... ...+ .......+.++++||+ |++..+. ...|.+++.+++ .
T Consensus 217 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~-------~~~V~~~d~~~G-~- 280 (343)
T 2qe8_A 217 -----TSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLA-------HSAIGVITSADR-A- 280 (343)
T ss_dssp -----SEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGG-------GTEEEEEETTTT-E-
T ss_pred -----CeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccC-------CCeEEEEECCCC-C-
Confidence 5799998531 11000 0111 1112344578999986 6655433 346888887333 1
Q ss_pred eeeEEEcCCCCCccccCcCceeCCCCcEEEEEeC
Q 006979 287 YKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR 320 (623)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~ 320 (623)
...+..... ...+..+.+++||+||++...
T Consensus 281 -~~~~~~~~~---~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 281 -YKLLVTDEK---LSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp -EEEEEECGG---GSCEEEEEECTTSCEEEEECC
T ss_pred -EEEEEECCc---eecCCeeEECCCCcEEEEeCc
Confidence 222222111 134567788888887776654
No 485
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.46 E-value=0.00027 Score=69.92 Aligned_cols=93 Identities=8% Similarity=-0.011 Sum_probs=60.3
Q ss_pred CCEEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCC
Q 006979 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEK 574 (623)
Q Consensus 495 ~Pliv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ 574 (623)
.|.||++||... ....|...+..+. +.|+.+|+++.. ....++++.+.+..+++.- ...+
T Consensus 24 ~~~l~~~hg~~~--~~~~~~~~~~~L~---~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~~~ 83 (283)
T 3tjm_A 24 ERPLFLVHPIEG--STTVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QPEG 83 (283)
T ss_dssp SCCEEEECCTTC--CSGGGHHHHHHCS---SCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTT-CCSS
T ss_pred CCeEEEECCCCC--CHHHHHHHHHhcC---ceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHh-CCCC
Confidence 355778999843 3345666666665 899999996521 1123444444333333321 1136
Q ss_pred ceEEEEcChHHHHHHHHh-cC---CCcee---EEEecccC
Q 006979 575 RLCITGGSAGGYTTLAAL-AF---RDTFK---AGASLYGV 607 (623)
Q Consensus 575 rv~i~G~S~GG~~~~~~~-~~---~~~f~---a~v~~~g~ 607 (623)
++.++||||||.+++.++ .. ++.++ ..|.+.+.
T Consensus 84 ~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 84 PYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp CCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred CEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 899999999999999887 43 77787 77777664
No 486
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.44 E-value=0.0004 Score=73.12 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=81.3
Q ss_pred eecCCCCeEEEEEEEcCCCCCCCCCCCCCCCEEEEecCCCCCcccCc-C---------------CHHhHHHHcCceEEEE
Q 006979 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-L---------------NLSIQYWTSRGWAFVD 529 (623)
Q Consensus 466 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~~~Pliv~~hGg~~~~~~~~-~---------------~~~~~~~a~~G~~v~~ 529 (623)
++.. ++..+..|++...+. ....|+||++||||+...... + .....-|.+ -..++-
T Consensus 26 v~v~-~~~~lfy~f~~s~~~------~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~-~~~~lf 97 (452)
T 1ivy_A 26 LKSS-GSKHLHYWFVESQKD------PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IANVLY 97 (452)
T ss_dssp EECS-TTEEEEEEEECCSSC------GGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGG-SSEEEE
T ss_pred EeeC-CCCeEEEEEEEcCCC------CCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccc-cccEEE
Confidence 3334 567888888866431 345799999999997543211 0 001112333 368899
Q ss_pred ECC-CCCCCCchhHHHhhccCCccc---hHHHH-HHHHHHHHhCCCCCCCceEEEEcChHHHHHHHHh-----cCCCcee
Q 006979 530 VNY-GGSTGYGREFRERLLGRWGIV---DVNDC-CSCATFLVGSGKADEKRLCITGGSAGGYTTLAAL-----AFRDTFK 599 (623)
Q Consensus 530 ~d~-rGs~~~g~~~~~~~~~~~g~~---~~~D~-~~~~~~l~~~~~~d~~rv~i~G~S~GG~~~~~~~-----~~~~~f~ 599 (623)
+|. +|.|- ... ....+... ..+|. ....+|+.+.+.....++.|.|.||||+.+-.++ ..+-.++
T Consensus 98 iDqP~GtGf-S~~----~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~ 172 (452)
T 1ivy_A 98 LESPAGVGF-SYS----DDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQ 172 (452)
T ss_dssp ECCSTTSTT-CEE----SSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEE
T ss_pred EecCCCCCc-CCc----CCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccc
Confidence 995 66542 221 11122221 23343 3445566665555568999999999999554444 2345799
Q ss_pred EEEecccCCCHHH
Q 006979 600 AGASLYGVSIPVI 612 (623)
Q Consensus 600 a~v~~~g~~d~~~ 612 (623)
+++...|++|...
T Consensus 173 g~~ign~~~d~~~ 185 (452)
T 1ivy_A 173 GLAVGNGLSSYEQ 185 (452)
T ss_dssp EEEEESCCSBHHH
T ss_pred eEEecCCccChhh
Confidence 9999999998753
No 487
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.44 E-value=0.008 Score=58.96 Aligned_cols=182 Identities=9% Similarity=-0.028 Sum_probs=96.3
Q ss_pred eEEEEEEcCCCCcccceecccCC-CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCc
Q 006979 221 TEIVAIALNGQNIQEPKVLVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (623)
Q Consensus 221 ~~L~~idl~~g~~~~~~~l~~~~-~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~ 299 (623)
..|+++|.++|+. +..+..+. .......++|||+.|+ ..+ ..|+.+|.+ +. ..+.+.... .
T Consensus 15 ~~v~~~d~~tG~~--~w~~~~~~~~~~~~~~~~pdG~ilv--s~~--------~~V~~~d~~-G~---~~W~~~~~~-~- 76 (276)
T 3no2_A 15 NKIAIINKDTKEI--VWEYPLEKGWECNSVAATKAGEILF--SYS--------KGAKMITRD-GR---ELWNIAAPA-G- 76 (276)
T ss_dssp SEEEEEETTTTEE--EEEEECCTTCCCCEEEECTTSCEEE--ECB--------SEEEEECTT-SC---EEEEEECCT-T-
T ss_pred CEEEEEECCCCeE--EEEeCCCccCCCcCeEECCCCCEEE--eCC--------CCEEEECCC-CC---EEEEEcCCC-C-
Confidence 6799999988863 22333222 2344567999998554 322 248888873 32 333333221 1
Q ss_pred cccCcCceeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECC
Q 006979 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (623)
Q Consensus 300 ~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g 379 (623)
..+..+.+++||++++.... ...+++.+|+++.....+.... ....+.. ......++ ++++ ++++.. .
T Consensus 77 -~~~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~Gk~l~~~~~~~-~~~~~~~--~~~~v~~~---~~G~-~lv~~~--~ 144 (276)
T 3no2_A 77 -CEMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFET-GIERPHA--QFRQINKN---KKGN-YLVPLF--A 144 (276)
T ss_dssp -CEEEEEEECTTSCEEEEEES--TTEEEEEECTTSCEEEEEEECC-SCSSGGG--SCSCCEEC---TTSC-EEEEET--T
T ss_pred -ccccccEECCCCCEEEEecC--CCCEEEEEeCCCCEEEEEeccC-CCCcccc--cccCceEC---CCCC-EEEEec--C
Confidence 23456788999986554332 2457888998655444443211 1111111 01122233 2555 444443 3
Q ss_pred eEEEEEEeCCCCceeecccCCcceEee-eecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 380 RSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 380 ~~~L~~~d~~~~~~~~lt~~~~~v~~~-~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
...|+.+|.+++.+..+..+....... .++++ +++.... ...|+.+++++|+.
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~---~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGD-CLVACGD---AHCFVQLNLESNRI 198 (276)
T ss_dssp TTEEEEECTTSCEEEEEECSSCCCEEEECTTSC-EEEECBT---TSEEEEECTTTCCE
T ss_pred CCEEEEECCCCCEEEEEECCCCccceeEcCCCC-EEEEeCC---CCeEEEEeCcCCcE
Confidence 346888999855555555433222222 44444 4444332 24689999887763
No 488
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.36 E-value=0.088 Score=54.94 Aligned_cols=228 Identities=11% Similarity=0.069 Sum_probs=122.3
Q ss_pred CceEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
+.+..++++ ++++...++.|.++|+.++ .....+... ........++ ++.++....+ ..|.++
T Consensus 162 v~~~~~~~~-~l~s~~~dg~i~vwd~~~~-~~~~~~~~h----~~~v~~~~~~--~~~l~s~s~d---------g~i~~w 224 (445)
T 2ovr_B 162 VWSSQMRDN-IIISGSTDRTLKVWNAETG-ECIHTLYGH----TSTVRCMHLH--EKRVVSGSRD---------ATLRVW 224 (445)
T ss_dssp EEEEEEETT-EEEEEETTSCEEEEETTTT-EEEEEECCC----SSCEEEEEEE--TTEEEEEETT---------SEEEEE
T ss_pred EEEEEecCC-EEEEEeCCCeEEEEECCcC-cEEEEECCC----CCcEEEEEec--CCEEEEEeCC---------CEEEEE
Confidence 344555555 4555567888999999876 222333322 2234445554 5666655443 568999
Q ss_pred EcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCc
Q 006979 227 ALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (623)
|+.+++. ...+...........| ||+.|+....+. .|.++|+..+. ....+.+.. ..+...
T Consensus 225 d~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg--------~i~iwd~~~~~---~~~~~~~~~----~~v~~~ 285 (445)
T 2ovr_B 225 DIETGQC--LHVLMGHVAAVRCVQY--DGRRVVSGAYDF--------MVKVWDPETET---CLHTLQGHT----NRVYSL 285 (445)
T ss_dssp ESSSCCE--EEEEECCSSCEEEEEE--CSSCEEEEETTS--------CEEEEEGGGTE---EEEEECCCS----SCEEEE
T ss_pred ECCCCcE--EEEEcCCcccEEEEEE--CCCEEEEEcCCC--------EEEEEECCCCc---EeEEecCCC----CceEEE
Confidence 9988762 2333333333444445 888887665332 38888988762 333344433 345566
Q ss_pred eeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEee-cccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEE
Q 006979 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYS-LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (623)
Q Consensus 307 ~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~-~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~ 385 (623)
.| ||+.++.... ++. |..+|..+++...... ....+. .+.+ +++. +++...+|. |.+
T Consensus 286 ~~--~~~~l~~~~~-d~~--i~i~d~~~~~~~~~~~~~~~~v~---------~~~~-----~~~~-l~~~~~dg~--i~v 343 (445)
T 2ovr_B 286 QF--DGIHVVSGSL-DTS--IRVWDVETGNCIHTLTGHQSLTS---------GMEL-----KDNI-LVSGNADST--VKI 343 (445)
T ss_dssp EE--CSSEEEEEET-TSC--EEEEETTTCCEEEEECCCCSCEE---------EEEE-----ETTE-EEEEETTSC--EEE
T ss_pred EE--CCCEEEEEeC-CCe--EEEEECCCCCEEEEEcCCcccEE---------EEEE-----eCCE-EEEEeCCCe--EEE
Confidence 66 7775555544 343 6667777765433222 111111 1122 4454 444445665 445
Q ss_pred EeCCCCce-eeccc---CCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 386 LDDFGHSL-SLLDI---PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 386 ~d~~~~~~-~~lt~---~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
+|+.+++. ..+.. ....+..+..+++.+ ++++. ...|..+++.+++.
T Consensus 344 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~s~~~---dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 344 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV-ITSSD---DGTVKLWDLKTGEF 394 (445)
T ss_dssp EETTTCCEEEEECSTTSCSSCEEEEEECSSEE-EEEET---TSEEEEEETTTCCE
T ss_pred EECCCCcEEEEEccCCCCCCCEEEEEECCCEE-EEEeC---CCeEEEEECCCCce
Confidence 57766554 34443 223355555555544 34432 25688888887763
No 489
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=97.34 E-value=0.00069 Score=68.21 Aligned_cols=104 Identities=9% Similarity=-0.019 Sum_probs=61.2
Q ss_pred EEEEecCCCCCcccCcCCHHhHHHHcCceEEEEECCCCCCCCchhHHHhhccCCccchHHHHHHHHHHHHhCCCCCCCce
Q 006979 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGYGREFRERLLGRWGIVDVNDCCSCATFLVGSGKADEKRL 576 (623)
Q Consensus 497 liv~~hGg~~~~~~~~~~~~~~~~a~~G~~v~~~d~rGs~~~g~~~~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~rv 576 (623)
.|+++||.........|...+..|. .+|.|+.+|++|.+.......+.....+ ....+|+.+.++.+. +.+++
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~~~~~~~~~-~~~a~~~~~~i~~~~-----~~~p~ 163 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTGTALLPADL-DTALDAQARAILRAA-----GDAPV 163 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---CBCCEESSH-HHHHHHHHHHHHHHH-----TTSCE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCCCCCCcccccCCCCCCH-HHHHHHHHHHHHHhc-----CCCCE
Confidence 6888997211233345556666665 6899999999996542000000000000 111334444444332 13579
Q ss_pred EEEEcChHHHHHHHHh-cC----CCceeEEEecccC
Q 006979 577 CITGGSAGGYTTLAAL-AF----RDTFKAGASLYGV 607 (623)
Q Consensus 577 ~i~G~S~GG~~~~~~~-~~----~~~f~a~v~~~g~ 607 (623)
.++|||+||.+++.++ .+ ++.++.+|...+.
T Consensus 164 ~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~ 199 (319)
T 2hfk_A 164 VLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPY 199 (319)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCC
T ss_pred EEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCC
Confidence 9999999999999888 44 4568888777654
No 490
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.34 E-value=0.039 Score=57.71 Aligned_cols=233 Identities=10% Similarity=0.059 Sum_probs=118.7
Q ss_pred CceEEEeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 006979 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~i 226 (623)
+.++.++++. +++...++.|.++|+.++ .....+... ........+ +|+.++....+ ..|.++
T Consensus 202 v~~~~~~~~~-l~s~s~dg~i~~wd~~~~-~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~d---------g~i~iw 264 (445)
T 2ovr_B 202 VRCMHLHEKR-VVSGSRDATLRVWDIETG-QCLHVLMGH----VAAVRCVQY--DGRRVVSGAYD---------FMVKVW 264 (445)
T ss_dssp EEEEEEETTE-EEEEETTSEEEEEESSSC-CEEEEEECC----SSCEEEEEE--CSSCEEEEETT---------SCEEEE
T ss_pred EEEEEecCCE-EEEEeCCCEEEEEECCCC-cEEEEEcCC----cccEEEEEE--CCCEEEEEcCC---------CEEEEE
Confidence 3445555554 445557788999999876 222333322 222334445 77777665543 458888
Q ss_pred EcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCc
Q 006979 227 ALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (623)
Q Consensus 227 dl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (623)
|+.+++. ...+...........| ||++|+....+. .|.++|+..+. ....+.+.. ..+..
T Consensus 265 d~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~d~--------~i~i~d~~~~~---~~~~~~~~~----~~v~~- 324 (445)
T 2ovr_B 265 DPETETC--LHTLQGHTNRVYSLQF--DGIHVVSGSLDT--------SIRVWDVETGN---CIHTLTGHQ----SLTSG- 324 (445)
T ss_dssp EGGGTEE--EEEECCCSSCEEEEEE--CSSEEEEEETTS--------CEEEEETTTCC---EEEEECCCC----SCEEE-
T ss_pred ECCCCcE--eEEecCCCCceEEEEE--CCCEEEEEeCCC--------eEEEEECCCCC---EEEEEcCCc----ccEEE-
Confidence 9887752 2334333333444555 889887665332 38888988763 233344333 22233
Q ss_pred eeCCCCcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEE
Q 006979 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (623)
Q Consensus 307 ~ws~DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~ 386 (623)
+.+++++++.... +| .|..+|..+++.............+ ...+.+ +++ ++++...+|.-+ ++
T Consensus 325 -~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~-----v~~~~~-----~~~-~l~s~~~dg~v~--iw 387 (445)
T 2ovr_B 325 -MELKDNILVSGNA-DS--TVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQF-----NKN-FVITSSDDGTVK--LW 387 (445)
T ss_dssp -EEEETTEEEEEET-TS--CEEEEETTTCCEEEEECSTTSCSSC-----EEEEEE-----CSS-EEEEEETTSEEE--EE
T ss_pred -EEEeCCEEEEEeC-CC--eEEEEECCCCcEEEEEccCCCCCCC-----EEEEEE-----CCC-EEEEEeCCCeEE--EE
Confidence 3345665555544 34 4556677666543332211101111 011222 444 445555566544 45
Q ss_pred eCCCCce-eecc-----cCCcceEee-eecCCEEEEEEecCC-CCCeEEEEEcCC
Q 006979 387 DDFGHSL-SLLD-----IPFTDIDNI-TLGNDCLFVEGASGV-EPSSVAKVTLDD 433 (623)
Q Consensus 387 d~~~~~~-~~lt-----~~~~~v~~~-~~~~~~~~~~~~s~~-~~~~ly~~~l~~ 433 (623)
|+.+++. ..+. .....+..+ ...++.++++++... .+..++.+|.+.
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 7766654 3441 122335555 223344444444333 356677777654
No 491
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.33 E-value=0.018 Score=57.34 Aligned_cols=187 Identities=16% Similarity=0.118 Sum_probs=98.0
Q ss_pred EeCCEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC
Q 006979 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (623)
Q Consensus 152 ~s~d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g 231 (623)
..++.+++. ..++.|+.+|.+ + ......... ......+..+++|+.++. ..+ ..|+.+|.+ +
T Consensus 105 ~~~~~l~v~-t~~~~l~~~d~~-g-~~~~~~~~~----~~~~~~~~~~~~g~l~vg-t~~---------~~l~~~d~~-g 166 (330)
T 3hxj_A 105 IFEDILYVT-SMDGHLYAINTD-G-TEKWRFKTK----KAIYATPIVSEDGTIYVG-SND---------NYLYAINPD-G 166 (330)
T ss_dssp EETTEEEEE-CTTSEEEEECTT-S-CEEEEEECS----SCCCSCCEECTTSCEEEE-CTT---------SEEEEECTT-S
T ss_pred EECCEEEEE-ecCCEEEEEcCC-C-CEEEEEcCC----CceeeeeEEcCCCEEEEE-cCC---------CEEEEECCC-C
Confidence 345566554 345679999987 5 122222221 223456677888874433 221 569999998 5
Q ss_pred CcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCC
Q 006979 232 NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 311 (623)
Q Consensus 232 ~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~D 311 (623)
+. .............+...+||+ | |+.. . .|+.+| ..+. ......... ..+..+..++|
T Consensus 167 ~~--~~~~~~~~~~~~~~~~d~~g~-l-~v~t--~-------~l~~~d-~~g~---~~~~~~~~~----~~~~~~~~~~~ 225 (330)
T 3hxj_A 167 TE--KWRFKTNDAITSAASIGKDGT-I-YFGS--D-------KVYAIN-PDGT---EKWNFYAGY----WTVTRPAISED 225 (330)
T ss_dssp CE--EEEEECSSCCCSCCEECTTCC-E-EEES--S-------SEEEEC-TTSC---EEEEECCSS----CCCSCCEECTT
T ss_pred CE--eEEEecCCCceeeeEEcCCCE-E-EEEe--C-------EEEEEC-CCCc---EEEEEccCC----cceeceEECCC
Confidence 42 222322334455677778887 4 4442 2 288888 4332 222222222 34567788888
Q ss_pred CcEEEEEeCCCCeeeEEEEecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCCC
Q 006979 312 GELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGH 391 (623)
Q Consensus 312 G~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~~ 391 (623)
|.+++.+.. + .|+++|+++.............. ..... .++.|++... + ..|+++|.++.
T Consensus 226 g~l~v~t~~--~--gl~~~~~~g~~~~~~~~~~~~~~---------~~~~~----~~g~l~v~t~-~--ggl~~~d~~g~ 285 (330)
T 3hxj_A 226 GTIYVTSLD--G--HLYAINPDGTEKWRFKTGKRIES---------SPVIG----NTDTIYFGSY-D--GHLYAINPDGT 285 (330)
T ss_dssp SCEEEEETT--T--EEEEECTTSCEEEEEECSSCCCS---------CCEEC----TTSCEEEECT-T--CEEEEECTTSC
T ss_pred CeEEEEcCC--C--eEEEECCCCCEeEEeeCCCCccc---------cceEc----CCCeEEEecC-C--CCEEEECCCCc
Confidence 876665543 2 47778865554443332211111 11111 3556666543 2 25888887544
Q ss_pred ceeecc
Q 006979 392 SLSLLD 397 (623)
Q Consensus 392 ~~~~lt 397 (623)
......
T Consensus 286 ~~~~~~ 291 (330)
T 3hxj_A 286 EKWNFE 291 (330)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 444443
No 492
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.32 E-value=0.003 Score=66.50 Aligned_cols=164 Identities=8% Similarity=-0.067 Sum_probs=86.6
Q ss_pred CceEEEeCC--EEEE---EeCCCCcEEEEeCCCCC----CCce---ecCCCCCCCCeeecceeeCCC-CCEEEEEEeccC
Q 006979 147 GGAFRIFGD--TVIF---SNYKDQRLYKHSIDSKD----SSPL---PITPDYGEPLVSYADGIFDPR-FNRYVTVREDRR 213 (623)
Q Consensus 147 ~~~~~~s~d--~l~f---~~~~~~~l~~~d~~~g~----~~~~---~Lt~~~~~~~~~~~d~~~sPd-G~~l~~v~~~~~ 213 (623)
+.+.+++++ .+++ +...++.|.++|+.++. ...+ .+.... .......+..|+|+ ++.|+....+
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~~~las~s~D-- 171 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK-DAGGMVIDMKWNPTVPSMVAVCLAD-- 171 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC-SGGGSEEEEEECSSCTTEEEEEETT--
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC-CCCCceEEEEECCCCCCEEEEEECC--
Confidence 345566665 3443 45556778899875320 0001 111100 01234667889998 6666555443
Q ss_pred CCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEc
Q 006979 214 QDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA 293 (623)
Q Consensus 214 ~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~ 293 (623)
+.|.++|+.++.. ..........+...+|||||++|+....+. .|.++|+... ....+.
T Consensus 172 -------g~v~iwD~~~~~~--~~~~~~~~~~v~~v~wspdg~~lasgs~dg--------~v~iwd~~~~----~~~~~~ 230 (434)
T 2oit_A 172 -------GSIAVLQVTETVK--VCATLPSTVAVTSVCWSPKGKQLAVGKQNG--------TVVQYLPTLQ----EKKVIP 230 (434)
T ss_dssp -------SCEEEEEESSSEE--EEEEECGGGCEEEEEECTTSSCEEEEETTS--------CEEEECTTCC----EEEEEC
T ss_pred -------CeEEEEEcCCCcc--eeeccCCCCceeEEEEcCCCCEEEEEcCCC--------cEEEEccCCc----cccccc
Confidence 4588889987641 111222123355678999999998766332 3788887722 222222
Q ss_pred CCCC---CccccCcCceeCCCCcEEEEEeCCCCe----eeEEEEecCC
Q 006979 294 GFDP---TIVESPTEPKWSSKGELFFVTDRKNGF----WNLHKWIESN 334 (623)
Q Consensus 294 ~~~~---~~~~~~~~~~ws~DG~l~~~~~~~~g~----~~L~~~d~~~ 334 (623)
.... +-...+..+.|++++.++.......|. ..+..+++..
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 2110 000256688999988743332221222 2355566543
No 493
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.29 E-value=0.0076 Score=63.30 Aligned_cols=160 Identities=13% Similarity=0.074 Sum_probs=93.0
Q ss_pred cceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCc
Q 006979 194 ADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 272 (623)
Q Consensus 194 ~d~~~sP-dG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~ 272 (623)
..++++| ++..|+++... ..|+++|++++. ++.+..........+|+|||++|++....... ..
T Consensus 140 ~~lavdp~~~g~Lyv~d~~---------~~I~~id~~~~~---v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~---~~ 204 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQ---------HPTRLIDFEKEY---VSTVYSGLSKVRTICWTHEADSMIITNDQNNN---DR 204 (430)
T ss_dssp CEEEEETTEEEEEEEEEBT---------EEEEEEETTTTE---EEEEECCCSCEEEEEECTTSSEEEEEECCSCT---TS
T ss_pred CEEEECCCCCCeEEEEeCC---------CcEEEEECCCCE---EEEEecCCCCcceEEEeCCCCEEEEEeCCCCc---cc
Confidence 3467898 46566655432 679999999887 56665544445667899999988877643221 12
Q ss_pred eEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCC-CCcEEEEEeCCCCeeeEEEEecCCCeEEEEeeccccccccc
Q 006979 273 AELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPL 351 (623)
Q Consensus 273 ~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~-DG~l~~~~~~~~g~~~L~~~d~~~~~~~~l~~~~~~~~~~~ 351 (623)
..+++++.++.- .....+... ..+..+.++| +|.||+ ++. +..+|++++++++....+..... ..
T Consensus 205 ~~v~~~~~~g~~--~~~~~l~~~-----~~p~giavdp~~g~lyv-~d~--~~~~V~~~~~~~~~~~~~~~~~~----~~ 270 (430)
T 3tc9_A 205 PNNYILTRESGF--KVITELTKG-----QNCNGAETHPINGELYF-NSW--NAGQVFRYDFTTQETTPLFTIQD----SG 270 (430)
T ss_dssp EEEEEEEGGGTS--CSEEEEEEC-----SSCCCEEECTTTCCEEE-EET--TTTEEEEEETTTTEEEEEEECSS----SS
T ss_pred ceEEEEeCCCce--eeeeeeccC-----CCceEEEEeCCCCEEEE-EEC--CCCEEEEEECCCCcEEEEEEcCC----CC
Confidence 345666654431 111222222 2456788999 564554 554 34579999998876644432211 01
Q ss_pred ccccCcceeEEeecCCCCEEEEEEEECCeEEEEEEeCCC
Q 006979 352 WVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (623)
Q Consensus 352 w~~~~~~~~~l~~s~~~~~l~~~~~~~g~~~L~~~d~~~ 390 (623)
| ...+.+. ++++.||++... ..+|++++.++
T Consensus 271 ~---P~gia~~---pdG~~lyv~d~~--~~~I~~~~~d~ 301 (430)
T 3tc9_A 271 W---EFHIQFH---PSGNYAYIVVVN--QHYILRSDYDW 301 (430)
T ss_dssp C---CEEEEEC---TTSSEEEEEETT--TTEEEEEEEET
T ss_pred c---ceeEEEc---CCCCEEEEEECC--CCEEEEEeCCc
Confidence 1 1234443 377778887643 34566666543
No 494
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.28 E-value=0.0024 Score=65.51 Aligned_cols=180 Identities=7% Similarity=-0.216 Sum_probs=97.3
Q ss_pred EEEEEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCC--CCceEEEEEEecCCCceeeeEEEcCCCCCc
Q 006979 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMP--WDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (623)
Q Consensus 222 ~L~~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p--~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~ 299 (623)
.+.++|+++++. +..+.-+..- ++.+||||++|+......+... .....|.++|+.+... ..++..+..+.+
T Consensus 47 ~vsvID~~t~~v--~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAGCGVT--LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADIELPDAPRF 120 (368)
T ss_dssp EEEEEETTTTEE--EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEEEETTSCSC
T ss_pred eEEEEECCCCeE--EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEEECCCcccc
Confidence 899999999873 3444444332 6889999999887753211000 0145699999988743 222222211000
Q ss_pred --cccCcCceeCCCCcEEEEEeCCCCeeeEEE--EecCCCeEEEEeecccccccccccccCcceeEEeecCCCCEEEEEE
Q 006979 300 --VESPTEPKWSSKGELFFVTDRKNGFWNLHK--WIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (623)
Q Consensus 300 --~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~--~d~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~l~~s~~~~~l~~~~ 375 (623)
........++|||+.+|+++. .+...+.. +|+.+ .+.+....+ +.+.+ +++..|+..
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~-~~~~~v~V~~iD~~t--v~~i~v~~~-------------~~~~p---~g~~~~~~~ 181 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLF-GSSAAAGLSVPGASD--DQLTKSASC-------------FHIHP---GAAATHYLG 181 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEEC-SSSCEEEEEETTTEE--EEEEECSSC-------------CCCEE---EETTEEECC
T ss_pred ccCCCcceEEEcCCCCEEEEEcc-CCCCeEEEEEEchhh--ceEEECCCc-------------eEEcc---CCCeEEEEE
Confidence 013568899999996666665 23345656 78766 444432111 01111 555566555
Q ss_pred EECCeEEEEEEeCCC-----Cceee-----cccCCcceEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 006979 376 RQNGRSYLGILDDFG-----HSLSL-----LDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (623)
Q Consensus 376 ~~~g~~~L~~~d~~~-----~~~~~-----lt~~~~~v~~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~ 435 (623)
..+|.. ..++.++ +++.. +..+.... . ..+++.+++... ..++.+|+.+++
T Consensus 182 ~~dg~~--~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-----~~V~viD~~~~~ 242 (368)
T 1mda_H 182 SCPASL--AASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-----SSILQGDIPAAG 242 (368)
T ss_dssp CCTTSC--EEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-----SCCEEEECCSSC
T ss_pred cCCCCE--EEEECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-----CEEEEEECCCCc
Confidence 455543 3356654 33221 11111111 1 556777777654 578889987654
No 495
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.0041 Score=67.20 Aligned_cols=150 Identities=10% Similarity=-0.035 Sum_probs=88.5
Q ss_pred CceEEEeCCEEEEEeCCCCcEEEEeCCCCCCCc-eecCCCCCCCCeeecce--eeCCCC-CEEEEEEeccCCCCCCceeE
Q 006979 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADG--IFDPRF-NRYVTVREDRRQDALNSTTE 222 (623)
Q Consensus 147 ~~~~~~s~d~l~f~~~~~~~l~~~d~~~g~~~~-~~Lt~~~~~~~~~~~d~--~~sPdG-~~l~~v~~~~~~~~~~~~~~ 222 (623)
..+++++++..+++...++.|.++|+.++ ..+ ..+... ...+.+. .|+|+| +.|+-...| ..
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~-~~~~~~~~~H----~~~V~sv~~~~s~~g~~~laS~S~D---------~t 334 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDP-EVPSFYDQVH----DSYILSVSTAYSDFEDTVVSTVAVD---------GY 334 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBC-SSCSEEEECS----SSCEEEEEEECCTTSCCEEEEEETT---------SE
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCC-CCceEEeecc----cccEEEEEEEcCCCCCeEEEEeccC---------Ce
Confidence 34566666656677778899999999865 122 223321 2234555 578998 655554443 56
Q ss_pred EEEEEcCCCCcccceecccC-C-CcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCcc
Q 006979 223 IVAIALNGQNIQEPKVLVSG-S-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (623)
Q Consensus 223 L~~idl~~g~~~~~~~l~~~-~-~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~ 300 (623)
+.+.|+.+++. +..+... . ..+...+|||||+.|+-...+ ..|.+.|+..+.. ...+.+..
T Consensus 335 vklWD~~~~~~--~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d--------~tv~lwd~~~~~~---~~~l~gH~---- 397 (524)
T 2j04_B 335 FYIFNPKDIAT--TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA--------SSLRAVPSRAAFA---VHPLVSRE---- 397 (524)
T ss_dssp EEEECGGGHHH--HCEEEEECSCCSCCCEEEETTTTEEEEECSS--------SEEEEEETTCTTC---CEEEEECS----
T ss_pred EEEEECCCCCc--ccccccccccCcccceEeCCCcCeEEEeCCC--------CcEEEEECccccc---ceeeecCC----
Confidence 88889877541 2222211 1 123457899999986644322 2377778876532 23344444
Q ss_pred ccCcCceeCCCCcEEEEEeCCCCeeeEE
Q 006979 301 ESPTEPKWSSKGELFFVTDRKNGFWNLH 328 (623)
Q Consensus 301 ~~~~~~~ws~DG~l~~~~~~~~g~~~L~ 328 (623)
..+..++|+|||++++.... ++.-+||
T Consensus 398 ~~V~sva~Sp~g~~l~Sgs~-Dgtv~lw 424 (524)
T 2j04_B 398 TTITAIGVSRLHPMVLAGSA-DGSLIIT 424 (524)
T ss_dssp SCEEEEECCSSCCBCEEEET-TTEEECC
T ss_pred CceEEEEeCCCCCeEEEEEC-CCEEEEE
Confidence 46778899999994444443 4554443
No 496
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.26 E-value=0.27 Score=54.67 Aligned_cols=52 Identities=10% Similarity=0.051 Sum_probs=33.2
Q ss_pred EEEEEEeCCCCcee-ecccCCcceE-eeeecCCEEEEEEecCCCCCeEEEEEcCCCcc
Q 006979 381 SYLGILDDFGHSLS-LLDIPFTDID-NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (623)
Q Consensus 381 ~~L~~~d~~~~~~~-~lt~~~~~v~-~~~~~~~~~~~~~~s~~~~~~ly~~~l~~~~~ 436 (623)
..|+.+|+.++++. ++..+..... .+..+++.+|+ + .....++.+|+++|+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~-g---~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ-G---TADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE-E---CTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEE-E---CCCCcEEEEECCCCce
Confidence 67999999988754 3333322222 23566776554 3 2346899999998874
No 497
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.23 E-value=0.0061 Score=63.08 Aligned_cols=65 Identities=18% Similarity=0.050 Sum_probs=41.2
Q ss_pred CEEEEEeCCCCcEEEEeCCCCCCCceecCCCCCCCCeeecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCCC
Q 006979 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (623)
Q Consensus 155 d~l~f~~~~~~~l~~~d~~~g~~~~~~Lt~~~~~~~~~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g~ 232 (623)
+.++.+...|+.|.++|+.++ .....+... .......+|+|++..++++.... ..+.++|+.+++
T Consensus 156 ~~~las~s~D~tv~~Wd~~~~-~~~~~~~~~----~~~v~~v~~~p~~~~~l~~~~~d--------~~v~~wd~~t~~ 220 (393)
T 4gq1_A 156 EQVIASVGDDCTLIIWRLTDE-GPILAGYPL----SSPGISVQFRPSNPNQLIVGERN--------GNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEETTSEEEEEEEETT-EEEEEEEEC----SSCEEEEEEETTEEEEEEEEETT--------SEEEEEETTCCC
T ss_pred CCEEEEEECCCeEEEEECCCC-ceeeeecCC----CCCcEEEEECCCCCceEEecCCC--------CEEEEEECCCCc
Confidence 367778778888999998754 122222221 22345688999987655554432 567888887764
No 498
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.21 E-value=0.0021 Score=67.77 Aligned_cols=119 Identities=13% Similarity=0.066 Sum_probs=69.1
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEcCCC-----Cc-cc---ceecccCCCcccceeeCCC-CCEEEEE
Q 006979 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ-----NI-QE---PKVLVSGSDFYAFPRMDPR-GERMAWI 261 (623)
Q Consensus 192 ~~~d~~~sPdG~~l~~v~~~~~~~~~~~~~~L~~idl~~g-----~~-~~---~~~l~~~~~~~~~p~wSPD-G~~la~~ 261 (623)
.....+|+|||++|++...... ....+.++|+.++ .. .. .+.+....+.+...+|+|+ ++.|+-.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs-----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSE-----YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETT-----TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccC-----CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 3567889999998875321111 1267888887654 10 00 1111212334566789998 6766655
Q ss_pred EecCCCCCCCceEEEEEEecCCCceeeeEEEcCCCCCccccCcCceeCCCCcEEEEEeCCCCeeeEEEEecC
Q 006979 262 EWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (623)
Q Consensus 262 ~~~~~~~p~~~~~L~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ws~DG~l~~~~~~~~g~~~L~~~d~~ 333 (623)
..|. .|.++|+..+. ......+.. ..+....|+|||+.++.... +|. |..+|+.
T Consensus 169 s~Dg--------~v~iwD~~~~~---~~~~~~~~~----~~v~~v~wspdg~~lasgs~-dg~--v~iwd~~ 222 (434)
T 2oit_A 169 LADG--------SIAVLQVTETV---KVCATLPST----VAVTSVCWSPKGKQLAVGKQ-NGT--VVQYLPT 222 (434)
T ss_dssp ETTS--------CEEEEEESSSE---EEEEEECGG----GCEEEEEECTTSSCEEEEET-TSC--EEEECTT
T ss_pred ECCC--------eEEEEEcCCCc---ceeeccCCC----CceeEEEEcCCCCEEEEEcC-CCc--EEEEccC
Confidence 5333 38888988762 222222222 45678899999994444444 354 5566776
No 499
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.20 E-value=0.16 Score=55.15 Aligned_cols=82 Identities=10% Similarity=-0.029 Sum_probs=43.8
Q ss_pred eeeCCCCCEEEEEEeccCC-------CCCCceeEEEEEEcCCCCcccceecccCC----CcccceeeC---CCCC--EEE
Q 006979 196 GIFDPRFNRYVTVREDRRQ-------DALNSTTEIVAIALNGQNIQEPKVLVSGS----DFYAFPRMD---PRGE--RMA 259 (623)
Q Consensus 196 ~~~sPdG~~l~~v~~~~~~-------~~~~~~~~L~~idl~~g~~~~~~~l~~~~----~~~~~p~wS---PDG~--~la 259 (623)
+.++|+...|++...+... ..+.....|+.+|+++|+.....++.... +....|... +||+ +++
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 4567776666554432210 00011246999999999843323333211 233456544 4786 455
Q ss_pred EEEecCCCCCCCceEEEEEEecCCC
Q 006979 260 WIEWHHPNMPWDKAELWVGYISENG 284 (623)
Q Consensus 260 ~~~~~~~~~p~~~~~L~v~d~~~~~ 284 (623)
++. +. ...||++|..++.
T Consensus 320 ~~~-~~------~G~l~~lD~~tG~ 337 (571)
T 2ad6_A 320 SHI-DR------NGILYTLNRENGN 337 (571)
T ss_dssp EEE-CT------TSEEEEEETTTCC
T ss_pred EEe-CC------CcEEEEEECCCCC
Confidence 444 32 3458888887764
No 500
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.17 E-value=0.0076 Score=62.31 Aligned_cols=107 Identities=7% Similarity=-0.076 Sum_probs=62.7
Q ss_pred EEEEEeCCCCcEEEEeCCCCCCCce---ecCCCCCCCCeeecceeeCC--------CCCEEEEEEeccCCCCCCceeEEE
Q 006979 156 TVIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDP--------RFNRYVTVREDRRQDALNSTTEIV 224 (623)
Q Consensus 156 ~l~f~~~~~~~l~~~d~~~g~~~~~---~Lt~~~~~~~~~~~d~~~sP--------dG~~l~~v~~~~~~~~~~~~~~L~ 224 (623)
.++.+...|+.|.++|+.++ ... .+.... .-...+.+..|+| ||+.|+-...| ..+.
T Consensus 102 ~~las~~~d~~v~lw~~~~~--~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D---------~tv~ 169 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNE--TIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQVIASVGDD---------CTLI 169 (393)
T ss_dssp EEEEEEETTSCEEEEEEETT--EEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEEEEEEEETT---------SEEE
T ss_pred CEEEEEeCCCcEEEEECCCC--ccceeeeecccC-CCCCceEEEEEccccccccCCCCCEEEEEECC---------CeEE
Confidence 34555666777888888765 221 121111 1134567888987 88777665554 4577
Q ss_pred EEEcCCCCcccceecccCCCcccceeeCCCCCEEEEEEecCCCCCCCceEEEEEEecCC
Q 006979 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN 283 (623)
Q Consensus 225 ~idl~~g~~~~~~~l~~~~~~~~~p~wSPDG~~la~~~~~~~~~p~~~~~L~v~d~~~~ 283 (623)
+.|+.++.. ...+..........+|+|++..++..... ...|.++|+..+
T Consensus 170 ~Wd~~~~~~--~~~~~~~~~~v~~v~~~p~~~~~l~~~~~-------d~~v~~wd~~t~ 219 (393)
T 4gq1_A 170 IWRLTDEGP--ILAGYPLSSPGISVQFRPSNPNQLIVGER-------NGNIRIFDWTLN 219 (393)
T ss_dssp EEEEETTEE--EEEEEECSSCEEEEEEETTEEEEEEEEET-------TSEEEEEETTCC
T ss_pred EEECCCCce--eeeecCCCCCcEEEEECCCCCceEEecCC-------CCEEEEEECCCC
Confidence 778866531 33343444445567899998754444322 224777787765
Done!