BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006982
(623 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 187/312 (59%), Gaps = 8/312 (2%)
Query: 291 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDS--QRSEKEFV 348
+ + L +L A+++FS NI+G G G +YK L DGT + VKRL++ Q E +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 349 AEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLK 408
E+ + +RNL+ L GFCM ERLLVY +M NGS+ L ++ +DWP+R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
IA+G+ARG A+LH +C+P+IIHR++ + ILLD++FE + DFGLA+LM+ D H+ V
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 469 NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
G +G++APEY T ++ K DV+ +G +LLEL+TG+R ++A+ L++W+
Sbjct: 204 R---GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG- 587
L +L+ +D L D E+ Q ++VA C + P ERP M EV + L G
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS-PMERPKMSEVVRMLEGDGL 319
Query: 588 -ERYHFTTEDEI 598
ER+ ++E+
Sbjct: 320 AERWEEWQKEEM 331
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/312 (38%), Positives = 186/312 (59%), Gaps = 8/312 (2%)
Query: 291 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQD--SQRSEKEFV 348
+ + L +L A+++F NI+G G G +YK L DG + VKRL++ +Q E +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 349 AEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLK 408
E+ + +RNL+ L GFCM ERLLVY +M NGS+ L ++ +DWP+R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
IA+G+ARG A+LH +C+P+IIHR++ + ILLD++FE + DFGLA+LM+ D H+ V
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 469 NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
G +G++APEY T ++ K DV+ +G +LLEL+TG+R ++A+ L++W+
Sbjct: 196 RGX---IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG- 587
L +L+ +D L D E+ Q ++VA C + P ERP M EV + L G
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS-PMERPKMSEVVRMLEGDGL 311
Query: 588 -ERYHFTTEDEI 598
ER+ ++E+
Sbjct: 312 AERWEEWQKEEM 323
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 163/288 (56%), Gaps = 11/288 (3%)
Query: 294 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQ-DSQRSEKEFVAEMA 352
++ L DL +ATN+F +IG G G +YK +L DG + +KR +S + +EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIG 412
TL ++ +LV L+GFC + E +L+YK+M NG+L L+ +D S+ W +RL+I IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID-THLSTFVNGE 471
AARG +LH IIHR++ S ILLD++F PKI+DFG+++ +D THL V
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK-- 202
Query: 472 FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531
G LGY+ PEY T K DVYSFG VL E++ R V P NL EW +
Sbjct: 203 -GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMV-NLAEWAVES 259
Query: 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ GQL+ +D L K L +F A C L ++RP+M +V
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC-LALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 162/288 (56%), Gaps = 11/288 (3%)
Query: 294 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQ-DSQRSEKEFVAEMA 352
++ L DL +ATN+F +IG G G +YK +L DG + +KR +S + +EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIG 412
TL ++ +LV L+GFC + E +L+YK+M NG+L L+ +D S+ W +RL+I IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI-DTHLSTFVNGE 471
AARG +LH IIHR++ S ILLD++F PKI+DFG+++ + THL V
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK-- 202
Query: 472 FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531
G LGY+ PEY T K DVYSFG VL E++ R V P NL EW +
Sbjct: 203 -GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMV-NLAEWAVES 259
Query: 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ GQL+ +D L K L +F A C L ++RP+M +V
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKC-LALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 24/299 (8%)
Query: 299 DLMKATNSFSKN------NIIGSGRTGTMYKALLEDGTSLMVKRLQ-----DSQRSEKEF 347
+L TN+F + N +G G G +YK + + T++ VK+L ++ +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ + ++ NLV LLGF + LVY +MPNGSL D L D T + W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRC 136
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
KIA GAA G +LH N + IHR+I S ILLD+ F KISDFGLAR +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ--TVM 191
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527
+ G Y+APE R + TPK D+YSFG VLLE++TG + + P+ L
Sbjct: 192 XSRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIK 247
Query: 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
++D IDK + + VA C L +RP + +V Q L+ +
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQC-LHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 146/299 (48%), Gaps = 24/299 (8%)
Query: 299 DLMKATNSFSKN------NIIGSGRTGTMYKALLEDGTSLMVKRLQ-----DSQRSEKEF 347
+L TN+F + N +G G G +YK + + T++ VK+L ++ +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ + ++ NLV LLGF + LVY +MPNGSL D L D T + W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRC 136
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
KIA GAA G +LH N + IHR+I S ILLD+ F KISDFGLAR +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ--TVM 191
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527
G Y+APE R + TPK D+YSFG VLLE++TG + + P+ L
Sbjct: 192 XXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIK 247
Query: 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
++D IDK + + VA C L +RP + +V Q L+ +
Sbjct: 248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQC-LHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 145/299 (48%), Gaps = 24/299 (8%)
Query: 299 DLMKATNSFSKN------NIIGSGRTGTMYKALLEDGTSLMVKRLQ-----DSQRSEKEF 347
+L TN+F + N +G G G +YK + + T++ VK+L ++ +++F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 71
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ + ++ NLV LLGF + LVY +MPNGSL D L D T + W R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSWHMRC 130
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
KIA GAA G +LH N + IHR+I S ILLD+ F KISDFGLAR
Sbjct: 131 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ--XVM 185
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527
G Y+APE R + TPK D+YSFG VLLE++TG + + P+ L
Sbjct: 186 XXRIVGTTAYMAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIK 241
Query: 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
++D IDK + + VA C L +RP + +V Q L+ +
Sbjct: 242 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQC-LHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 299 DLMKATNSFSKN------NIIGSGRTGTMYKALLEDGTSLMVKRLQ-----DSQRSEKEF 347
+L TN+F + N G G G +YK + + T++ VK+L ++ +++F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ ++ NLV LLGF + LVY + PNGSL D L D T + W R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT-PPLSWHXRC 127
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
KIA GAA G +LH N + IHR+I S ILLD+ F KISDFGLAR +
Sbjct: 128 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX- 183
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ G Y APE R + TPK D+YSFG VLLE++TG + + P+
Sbjct: 184 -SRIVGTTAYXAPEALRGEI-TPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 115/203 (56%), Gaps = 14/203 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQ-RSEK--EFVAEMATLGSVKNRNLVPLLGFC 369
IG+G GT+++A G+ + VK L + +E+ EF+ E+A + +++ N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+V +++ GSLY LLH + + +D RRL +A A+G +LH N NP I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE--FGDLGYVAPEYARTLV 487
HRN+ S +L+D + K+ DFGL+RL STF++ + G ++APE R
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
+ K DVYSFG +L EL T ++P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 14/203 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQ-RSEK--EFVAEMATLGSVKNRNLVPLLGFC 369
IG+G GT+++A G+ + VK L + +E+ EF+ E+A + +++ N+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+V +++ GSLY LLH + + +D RRL +A A+G +LH N NP I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF--GDLGYVAPEYARTLV 487
HR++ S +L+D + K+ DFGL+RL S F+ + G ++APE R
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL------KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
+ K DVYSFG +L EL T ++P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 88
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 143
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 144 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 245
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+Q +++ KERP + +LR++ E + TE +
Sbjct: 246 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATEGQ 283
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL+ D + +F + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE--DAEXTAREGAKF-PIKWTAPEAINYGTFTIKS 191
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 236
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+Q +++ KERP + +LR++ E + TE +
Sbjct: 237 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATEGQ 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 87
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 142
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 143 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 244
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+Q +++ KERP + +LR++ E + TE +
Sbjct: 245 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATEGQ 282
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 236
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+Q +++ KERP + +LR++ E + TE +
Sbjct: 237 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATEGQ 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 17/227 (7%)
Query: 286 SLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSE 344
+ EK + + D K F K IG G +GT+Y A+ + G + ++++ Q+ +
Sbjct: 5 EILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK 61
Query: 345 KEFVA-EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDW 403
KE + E+ + KN N+V L + E +V +++ GSL D++ T +D
Sbjct: 62 KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDE 116
Query: 404 PRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463
+ + + +LH N ++IHRNI S ILL D K++DFG + P +
Sbjct: 117 GQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
ST V + ++APE PK D++S G + +E++ GE P
Sbjct: 174 RSTMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 85
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 140
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 242
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+Q +++ KERP + +LR++ E + TE +
Sbjct: 243 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATEGQ 280
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 33/284 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 140 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 241
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTE 595
EL+Q +++ KERP + +LR++ E + TE
Sbjct: 242 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATE 277
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 75
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHRN
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRN 130
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 131 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 232
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
EL+Q +++ KERP + +LR++ E + T
Sbjct: 233 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 89
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 144
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 145 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 246
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+Q +++ KERP + +LR++ E + TE +
Sbjct: 247 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTATEGQ 284
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 287 LFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEK 345
+ EK + + + D K F K IG G +GT+Y A+ + G + ++++ Q+ +K
Sbjct: 5 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 346 EFVA-EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404
E + E+ + KN N+V L + E +V +++ GSL D++ T +D
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEG 116
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464
+ + + +LH N ++IHR+I S ILL D K++DFG + P +
Sbjct: 117 QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
ST V + ++APE PK D++S G + +E++ GE P
Sbjct: 174 STMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 81
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 136
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 137 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 238
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
EL+Q +++ KERP + +LR++ E + T
Sbjct: 239 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 236
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
EL+Q +++ KERP + +LR++ E + T
Sbjct: 237 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 80
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 135
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 136 LRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 237
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
EL+Q +++ KERP + +LR++ E + T
Sbjct: 238 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 135 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 236
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
EL+Q +++ KERP + +LR++ E + T
Sbjct: 237 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 85
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 140
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 141 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 242
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
EL+Q +++ KERP + +LR++ E + T
Sbjct: 243 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 33/279 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + VK L+ S F+AE + ++++ LV L + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 74
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NGSL D L +++ + L +A A G A++ IHR+
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRD 129
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ D KI+DFGLARL I+ + T G + + APE T K
Sbjct: 130 LRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+VT G P PE + Q G D C
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPDNC------P 231
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590
EL+Q +++ KERP + +LR++ E +
Sbjct: 232 EELYQLMRLCW--------KERPEDRPTFDYLRSVLEDF 262
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 17/227 (7%)
Query: 286 SLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSE 344
+ EK + + + D K F K IG G +GT+Y A+ + G + ++++ Q+ +
Sbjct: 5 EILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK 61
Query: 345 KEFVA-EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDW 403
KE + E+ + KN N+V L + E +V +++ GSL D++ T +D
Sbjct: 62 KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDE 116
Query: 404 PRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463
+ + + +LH N ++IHR+I S ILL D K++DFG + P +
Sbjct: 117 GQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
S V + ++APE PK D++S G + +E++ GE P
Sbjct: 174 RSXMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Query: 287 LFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEK 345
+ EK + + + D K F K IG G +GT+Y A+ + G + ++++ Q+ +K
Sbjct: 5 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 346 EFVA-EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404
E + E+ + KN N+V L + E +V +++ GSL D++ T +D
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEG 116
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464
+ + + +LH N ++IHR+I S ILL D K++DFG + P +
Sbjct: 117 QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
S V + ++APE PK D++S G + +E++ GE P
Sbjct: 174 SXMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 17/226 (7%)
Query: 287 LFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEK 345
+ EK + + + D K F K IG G +GT+Y A+ + G + ++++ Q+ +K
Sbjct: 5 ILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 346 EFVA-EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404
E + E+ + KN N+V L + E +V +++ GSL D++ T +D
Sbjct: 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEG 116
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464
+ + + +LH N ++IHR+I S ILL D K++DFG + P +
Sbjct: 117 QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
S V + ++APE PK D++S G + +E++ GE P
Sbjct: 174 SEMVGTPY----WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 17/212 (8%)
Query: 308 SKNNIIGSGRTGTMYKALLEDGTS-----LMVKRLQD--SQRSEKEFVAEMATLGSVKNR 360
++ +IG+G G +YK +L+ + + +K L+ +++ +F+ E +G +
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAW- 419
N++ L G K +++ ++M NG+L L D + +G RG A
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ-------LVGMLRGIAAG 159
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
+ + N +HR+++++ IL++ + K+SDFGL+R++ D + +G + + A
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTA 218
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
PE T DV+SFG V+ E++T GERP
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ T + +K L+ S + F+ E + +K+ LV L +++
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVSE 75
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L D G+++ P + +A A G A++ IHR+
Sbjct: 76 EPIYIVTEYMNKGSLLDFLK--DGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRD 130
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ S IL+ + KI+DFGLARL I+ + T G + + APE A T K
Sbjct: 131 LRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L ELVT R
Sbjct: 188 DVWSFGILLTELVTKGR 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 30/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ + T + VK L+ S + F+ E + ++++ LV L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M GSL D L D G V P+ + + A G A++ IHR+
Sbjct: 81 EPIYIITEYMAKGSLLDFLK--SDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRD 135
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + +L+ + KI+DFGLAR+ I+ + T G + + APE T K
Sbjct: 136 LRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L E+VT K P + G + S G ++ C +
Sbjct: 193 DVWSFGILLYEIVT------YGKIP--YPGRTNADVMTALSQGYRMPRVENC------PD 238
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+ +K+ +ERPT + +L+++ + ++ TE +
Sbjct: 239 ELYDIMKMCWK----EKAEERPT----FDYLQSVLDDFYTATEGQ 275
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ + ++ D + + F E+A L ++ N++ +G+ M
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K +V + SLY LH + + + + IA A+G +LH IIHR
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLHAK---NIIHR 156
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L + KI DFGLA + + S V G + ++APE R P
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSG--SQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 491 --KGDVYSFGTVLLELVTGERP 510
+ DVYS+G VL EL+TGE P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 24/235 (10%)
Query: 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEF 347
M L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE
Sbjct: 3 MALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWP 404
+ E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW- 119
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464
+ A G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 120 -----CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 172 HA--EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 116/233 (49%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDG------TSLMVKRLQDSQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G ++M R S ++ KE +
Sbjct: 42 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD 100
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 101 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 156
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 157 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 211 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 261
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 8 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 122
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 123 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 10 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 125 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 179 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 9 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 67
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 123
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 124 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 178 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 11 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 125
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 126 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 180 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 9 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 67
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW--- 123
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 124 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 178 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 8 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 122
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 123 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 119/233 (51%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 12 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 70
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 126
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 127 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 181 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 2 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 60
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 116
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 117 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 171 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ A T + VK ++ S + F+AE + ++++ LV L + K
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 81
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ + M GSL D L D G P+ + + A G A++ IHR+
Sbjct: 82 EPIYIITEFMAKGSLLDFLK--SDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 136
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ KI+DFGLAR+ I+ + T G + + APE T K
Sbjct: 137 LRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKG 522
DV+SFG +L+E+VT G P PE +
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 10 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 125 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 179 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 11 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 125
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 126 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 180 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 18 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 76
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 77 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 132
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 133 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 187 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 237
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 8 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 122
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 123 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 333
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + +A A G A++ +HR+
Sbjct: 334 EPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 388
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 389 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 446 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 492
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 493 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 528
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ A T + VK ++ S + F+AE + ++++ LV L + K
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 254
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ + M GSL D L D G P+ + + A G A++ IHR+
Sbjct: 255 EPIYIITEFMAKGSLLDFLK--SDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 309
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ KI+DFGLAR+ I+ + T G + + APE T K
Sbjct: 310 LRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L+E+VT G P PE + A+++ +
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIR------------------ALERGYRMPRPE 408
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
N + + C P+ERPT +++++++ + ++ TE +
Sbjct: 409 NCPEELYNIMMRC-WKNRPEERPT----FEYIQSVLDDFYTATESQ 449
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 8 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW--- 122
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 123 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 11 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 125
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 126 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 180 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 15 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 129
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 130 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 184 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 14 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 72
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 73 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 128
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 129 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 183 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 233
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 11 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 69
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 125
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 126 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 180 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + +A A G A++ +HR+
Sbjct: 251 EPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 305
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 306 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 363 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 409
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 410 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 445
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 33 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 91
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 92 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 147
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 148 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 202 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 252
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + +A A G A++ +HR+
Sbjct: 75 EPIXIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 129
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 130 LRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 187 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 233
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 234 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 269
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + +A A G A++ +HR+
Sbjct: 251 EPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 305
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 306 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 363 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 409
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 410 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 445
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 78
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH ++ + + + IA ARG +LH IIHR
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R + P
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 491 --KGDVYSFGTVLLELVTGERP 510
+ DVY+FG VL EL+TG+ P
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ +V ++MP G+L D L + + V L +A + +L IHR
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNR--EEVTAVVLLYMATQISSAMEYLEKK---NFIHR 154
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 30/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ + T + VK L+ S + F+ E + ++++ LV L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ + M GSL D L D G V P+ + + A G A++ IHR+
Sbjct: 80 EPIYIITEFMAKGSLLDFLK--SDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRD 134
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + +L+ + KI+DFGLAR+ I+ + T G + + APE T K
Sbjct: 135 LRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
+V+SFG +L E+VT K P + G + S G ++ C +
Sbjct: 192 NVWSFGILLYEIVT------YGKIP--YPGRTNADVMSALSQGYRMPRMENC------PD 237
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
EL+ +K+ +ERPT + +L+++ + ++ TE +
Sbjct: 238 ELYDIMKMCWK----EKAEERPT----FDYLQSVLDDFYTATEGQ 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + +A A G A++ +HR+
Sbjct: 78 EPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 132
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 133 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 190 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 236
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 237 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 272
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 34/298 (11%)
Query: 296 RLSDLMKATNSFSKNNIIGSGRTGTMYKALL--EDGTSLMV-----KRLQDSQRSEKEFV 348
+L D++ N I+G G G++ + L EDGTSL V K SQR +EF+
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 349 AEMATLGSVKNRNLVPLLGFCMAKKER-----LLVYKHMPNGSLYD-LLHPADDTG-KSV 401
+E A + + N++ LLG C+ + +++ M G L+ LL+ +TG K +
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 402 DWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461
LK + A G +L N +HR+++++ +L DD ++DFGL++ + D
Sbjct: 145 PLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
Query: 462 THLSTFVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519
+ G + ++A E V T K DV++FG + E+ T + P
Sbjct: 202 ----YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT----RGMTPYPGV 253
Query: 520 FKGNLVEWIAQLSSTGQLQDAIDK-------CLVAKGVDNELFQFLKVACNCVLPTIP 570
+ +++ Q +D +D+ C +D F L++ +L ++P
Sbjct: 254 QNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + +A A G A++ +HR+
Sbjct: 251 EPIYIVGEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 305
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 306 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 363 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 409
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 410 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 445
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 38/272 (13%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 218
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 219 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 276
Query: 495 YSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNEL 554
+SFG +L E+ T + +P + G VE + +L G D C NEL
Sbjct: 277 WSFGVLLWEIFT------LGGSP--YPGVPVEELFKLLKEGHRMDKPSNC------TNEL 322
Query: 555 FQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
+ ++ + V P +RPT ++ + L I
Sbjct: 323 YMMMRDCWHAV----PSQRPTFKQLVEDLDRI 350
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 312 IIGSGRTGTMYKAL-LEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRNLVPLLG 367
IIG G G +Y+A + D ++ R +D ++ + E +K+ N++ L G
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 368 FCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427
C+ + LV + G L +L +GK + + A+ ARG +LH
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 428 IIHRNISSKCILLDDDFEP--------KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
IIHR++ S IL+ E KI+DFGLAR + H +T ++ G ++A
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA-GAYAWMA 182
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
PE R + + DV+S+G +L EL+TGE P
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 169
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 170 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 227
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 228 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNCT------NE 272
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 273 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 301
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 90
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH ++ + + + IA ARG +LH IIHR
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-----FGDLGYVAPEYARTL 486
++ S I L +D KI DFGLA T S + G + ++APE R
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 487 VATP---KGDVYSFGTVLLELVTGERP 510
+ P + DVY+FG VL EL+TG+ P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 235
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 236 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNC------TNE 280
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 281 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 38/272 (13%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 166
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 167 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 224
Query: 495 YSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNEL 554
+SFG +L E+ T + +P + G VE + +L G D C NEL
Sbjct: 225 WSFGVLLWEIFT------LGGSP--YPGVPVEELFKLLKEGHRMDKPSNCT------NEL 270
Query: 555 FQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
+ ++ + V P +RPT ++ + L I
Sbjct: 271 YMMMRDCWHAV----PSQRPTFKQLVEDLDRI 298
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSL--MVKRLQD--SQRSEKEFVAEMATLGSVKN 359
N ++IG G G + KA ++ DG + +KR+++ S+ ++F E+ L + +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 360 R-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHP------------ADDTGKSVDWPRR 406
N++ LLG C + L ++ P+G+L D L A+ T ++ +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
L A ARG +L + IHRN++++ IL+ +++ KI+DFGL+R
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQ-------EV 191
Query: 467 FVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF--- 520
+V G L ++A E V T DV+S+G +L E+V+ G P E +
Sbjct: 192 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251
Query: 521 -KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT 575
+G +E L+ ++ D + +C K + F + V+ N +L +ER T
Sbjct: 252 PQGYRLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML----EERKT 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 235
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 236 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNCT------NE 280
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 281 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 162
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 220
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 221 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNC------TNE 265
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 266 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 170
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 228
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 229 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNC------TNE 273
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 274 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 302
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID + T NG + ++APE + T + DV
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 235
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 236 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNC------TNE 280
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 281 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 309
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 10/208 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+GSG+ G + + + VK +++ SE EF E T+ + + LV G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+V +++ NG L + L GK ++ + L++ G A+L + + IHR+
Sbjct: 76 YPIYIVTEYISNGCLLNYLR---SHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRD 129
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+D D K+SDFG+ R + +D + V +F + + APE + K
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYV--LDDQYVSSVGTKF-PVKWSAPEVFHYFKYSSKS 186
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPET 519
DV++FG ++ E+ + G+ P ++ E
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+++ IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LAAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 10 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFG A+L+ +
Sbjct: 125 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 179 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++ SG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 15 LLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 129
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 130 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 184 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 102
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 491 --KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQLQDAI 541
+ DVY+FG VL EL+TG+ P +N+ + +G L ++++ S ++ +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 274
Query: 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
+CL K + LF + + + ++PK
Sbjct: 275 AECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 101
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 155
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 491 --KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQLQDAI 541
+ DVY+FG VL EL+TG+ P +N+ + +G L ++++ S ++ +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 273
Query: 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
+CL K + LF + + + ++PK
Sbjct: 274 AECLKKKRDERPLFPQILASIELLARSLPK 303
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + ++ A G A++ +HR+
Sbjct: 82 EPIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRD 136
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 137 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 194 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 240
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 241 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 276
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 12 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 70
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 126
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFG A+L+ +
Sbjct: 127 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 181 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 10 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L++ + MP G L D + D S ++W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFG A+L+ +
Sbjct: 125 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 179 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+ A
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ +V + SLY LH ++ + + + IA ARG +LH IIHR
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-----FGDLGYVAPEYARTL 486
++ S I L +D KI DFGLA T S + G + ++APE R
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 487 VATP---KGDVYSFGTVLLELVTGERP 510
+ P + DVY+FG VL EL+TG+ P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 79
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 491 --KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQLQDAI 541
+ DVY+FG VL EL+TG+ P +N+ + +G L ++++ S ++ +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 251
Query: 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
+CL K + LF + + + ++PK
Sbjct: 252 AECLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 197 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 244 ----LHDLMCQCWRKD-PEERPT----FEYLQAFLEDYFTSTEPQ 279
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 79
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 491 --KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQLQDAI 541
+ DVY+FG VL EL+TG+ P +N+ + +G L ++++ S ++ +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 251
Query: 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
+CL K + LF + + + ++PK
Sbjct: 252 AECLKKKRDERPLFPQILASIELLARSLPK 281
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 76
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 130
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 491 --KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQLQDAI 541
+ DVY+FG VL EL+TG+ P +N+ + +G L ++++ S ++ +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 248
Query: 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
+CL K + LF + + + ++PK
Sbjct: 249 AECLKKKRDERPLFPQILASIELLARSLPK 278
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 339
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
N++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV++FG +L E+ T G P + G LS +L + + +G
Sbjct: 397 SDVWAFGVLLWEIATYGMSP---------YPG------IDLSQVYELLEKDYRMERPEGC 441
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
++++ ++ AC P +RP+ E++Q + + + E E
Sbjct: 442 PEKVYELMR-AC---WQWNPSDRPSFAEIHQAFETMFQESSISDEVE 484
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 294 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKA-LLEDGTSLMVKRL------QDSQRSEK- 345
K RL L A N IG G G ++K L++D + + +K L +++ EK
Sbjct: 10 KSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 346 -EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404
EF E+ + ++ + N+V L G M R+ V + +P G LY H D + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGL-MHNPPRM-VMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD--DDFEP---KISDFGLARLMNP 459
+L++ + A G ++ N NP I+HR++ S I L D+ P K++DFGL++
Sbjct: 123 VKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ--- 178
Query: 460 IDTHLSTFVNGEFGDLGYVAPEY--ARTLVATPKGDVYSFGTVLLELVTGERP 510
H V+G G+ ++APE A T K D YSF +L ++TGE P
Sbjct: 179 -SVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++ SG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 8 LLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 122
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 123 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L +TGK + P+ + ++ A G A++ +HR+
Sbjct: 82 EPIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRD 136
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 137 LRAANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 194 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 240
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 241 ----LHDLMCQCWRKE-PEERPT----FEYLQAFLEDYFTSTEPQ 276
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 15 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 129
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFG A+L+ +
Sbjct: 130 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 184 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 10 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 68
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFG A+L+ +
Sbjct: 125 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 179 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++ SG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 15 LLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 73
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 129
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFGLA+L+ +
Sbjct: 130 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 184 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 24/233 (10%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQD--SQRSEKEFVA 349
L ++K T F K ++GSG GT+YK L + +G + +K L++ S ++ KE +
Sbjct: 8 LLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 66
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRR 406
E + SV N ++ LLG C+ +L+ + MP G L D + D S ++W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--- 122
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ A+G +L + R++HR+++++ +L+ KI+DFG A+L+ +
Sbjct: 123 ---CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
G + ++A E + T + DV+S+G + EL+T G +P + A E
Sbjct: 177 --EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 491 --KGDVYSFGTVLLELVTGERP 510
+ DVY+FG VL EL+TG+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 74 EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 128
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 129 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 186 DVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 76 EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 130
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 131 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 188 DVWSFGILLTELTTKGR 204
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 40/273 (14%)
Query: 330 TSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGS 386
T + VK L+ +++ + ++EM + + K++N++ LLG C ++ ++ G+
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 387 LYDLLH------------PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L + L P+ + + + + A ARG +L + + IHR+++
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDV 494
++ +L+ +D KI+DFGLAR ++ ID T NG + ++APE + T + DV
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKT-TNGRL-PVKWMAPEALFDRIYTHQSDV 235
Query: 495 YSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE 553
+SFG +L E+ T G P + G VE + +L G D C NE
Sbjct: 236 WSFGVLLWEIFTLGGSP---------YPGVPVEELFKLLKEGHRMDKPSNC------TNE 280
Query: 554 LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
L+ ++ + V P +RPT ++ + L I
Sbjct: 281 LYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 309
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLE---KKNFIHR 381
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
N++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV++FG +L E+ T G P + G LS +L + + +G
Sbjct: 439 SDVWAFGVLLWEIATYGMSP---------YPG------IDLSQVYELLEKDYRMERPEGC 483
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
++++ ++ AC P +RP+ E++Q + + + E E
Sbjct: 484 PEKVYELMR-AC---WQWNPSDRPSFAEIHQAFETMFQESSISDEVE 526
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 29/287 (10%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 342
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
N++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV++FG +L E+ T G P + G LS +L + + +G
Sbjct: 400 SDVWAFGVLLWEIATYGMSP---------YPG------IDLSQVYELLEKDYRMERPEGC 444
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
++++ ++ AC P +RP+ E++Q + + + E E
Sbjct: 445 PEKVYELMR-AC---WQWNPSDRPSFAEIHQAFETMFQESSISDEVE 487
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+ A
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP- 490
++ S I L +D KI DFGLA + + S G + ++APE R P
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSG--SHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 491 --KGDVYSFGTVLLELVTGERP 510
+ DVY+FG VL EL+TG+ P
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVCEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGLAR++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 30/275 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 102
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG-EF----GDLGYVAPEYARTL 486
++ S I L +D KI DFGLA T S + +F G + ++APE R
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 487 VATP---KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQ 536
P + DVY+FG VL EL+TG+ P +N+ + +G L ++++ S
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 269
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
++ + +CL K + LF + + + ++PK
Sbjct: 270 MKRLMAECLKKKRDERPLFPQILASIELLARSLPK 304
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 30/275 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 94
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 148
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG-EF----GDLGYVAPEYARTL 486
++ S I L +D KI DFGLA T S + +F G + ++APE R
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 487 VATP---KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQ 536
P + DVY+FG VL EL+TG+ P +N+ + +G L ++++ S
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 261
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
++ + +CL K + LF + + + ++PK
Sbjct: 262 MKRLMAECLKKKRDERPLFPQILASIELLARSLPK 296
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSL--MVKRLQD--SQRSEKEFVAEMATLGSVKN 359
N ++IG G G + KA ++ DG + +KR+++ S+ ++F E+ L + +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 360 R-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHP------------ADDTGKSVDWPRR 406
N++ LLG C + L ++ P+G+L D L A+ T ++ +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
L A ARG +L + IHR+++++ IL+ +++ KI+DFGL+R
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQ-------EV 184
Query: 467 FVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF--- 520
+V G L ++A E V T DV+S+G +L E+V+ G P E +
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
Query: 521 -KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT 575
+G +E L+ ++ D + +C K + F + V+ N +L +ER T
Sbjct: 245 PQGYRLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML----EERKT 294
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + +T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKNT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 173
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 174 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 231
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 232 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 277
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 278 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 308
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IGSG+ G ++ + + +K +++ SE++F+ E + + + LV L G C+ +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
LV++ M +G L D L + L + + G A+L C +IHR+
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+ ++ K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 188
Query: 493 DVYSFGTVLLELVT 506
DV+SFG ++ E+ +
Sbjct: 189 DVWSFGVLMWEVFS 202
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSL--MVKRLQD--SQRSEKEFVAEMATLGSVKN 359
N ++IG G G + KA ++ DG + +KR+++ S+ ++F E+ L + +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 360 R-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHP------------ADDTGKSVDWPRR 406
N++ LLG C + L ++ P+G+L D L A+ T ++ +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
L A ARG +L + IHR+++++ IL+ +++ KI+DFGL+R
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQ-------EV 194
Query: 467 FVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF--- 520
+V G L ++A E V T DV+S+G +L E+V+ G P E +
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
Query: 521 -KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT 575
+G +E L+ ++ D + +C K + F + V+ N +L +ER T
Sbjct: 255 PQGYRLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML----EERKT 304
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQDSQRSE--KEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D E + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IGSG+ G ++ + + +K +++ SE++F+ E + + + LV L G C+ +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
LV++ M +G L D L + L + + G A+L C +IHR+
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+ ++ K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 183
Query: 493 DVYSFGTVLLELVT 506
DV+SFG ++ E+ +
Sbjct: 184 DVWSFGVLMWEVFS 197
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 168
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 169 DLTARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 226
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 227 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 272
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 273 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 303
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 30/275 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
IGSG GT+YK ++ M+ + + + F E+ L ++ N++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 74
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
K + +V + SLY LH + + + + + IA A+G +LH IIHR
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG-EF----GDLGYVAPEYARTL 486
++ S I L +D KI DFGLA T S + +F G + ++APE R
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA-------TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 487 VATP---KGDVYSFGTVLLELVTGERP-TNVAKAPETF----KGNLVEWIAQLSST--GQ 536
P + DVY+FG VL EL+TG+ P +N+ + +G L ++++ S
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPK 571
++ + +CL K + LF + + + ++PK
Sbjct: 242 MKRLMAECLKKKRDERPLFPQILASIELLARSLPK 276
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IGSG+ G ++ + + +K +++ SE++F+ E + + + LV L G C+ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
LV++ M +G L D L + L + + G A+L C +IHR+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+ ++ K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 185
Query: 493 DVYSFGTVLLELVT 506
DV+SFG ++ E+ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 54 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 170
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 171 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 228
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 229 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 274
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 275 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 305
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 31/285 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 251
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M GSL D L + GK + P+ + +A A G A++ +HR+
Sbjct: 252 EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 306
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGL RL I+ + T G + + APE A T K
Sbjct: 307 LRAANILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN 552
DV+SFG +L EL T K + G + + G +C +
Sbjct: 364 DVWSFGILLTELTT--------KGRVPYPGMVNREVLDQVERGYRMPCPPECPES----- 410
Query: 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
+ C C P+ERPT +++L+A E Y +TE +
Sbjct: 411 ----LHDLMCQCWRKD-PEERPT----FEYLQAFLEDYFTSTEPQ 446
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 140
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 118/222 (53%), Gaps = 20/222 (9%)
Query: 300 LMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQDSQ--RSEKEFVAEMA 352
++K T + ++GSG GT+YK + + +G ++ +K L ++ ++ EF+ E
Sbjct: 11 ILKET-ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHP-ADDTGKSVDWPRRLKIAI 411
+ S+ + +LV LLG C++ +L V + MP+G L + +H D+ G + L +
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCV 124
Query: 412 GAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE 471
A+G +L R++HR+++++ +L+ KI+DFGLARL+ + + +G
Sbjct: 125 QIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA--DGG 179
Query: 472 FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTN 512
+ ++A E T + DV+S+G + EL+T G +P +
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 24/145 (16%)
Query: 74 CWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKL------ 127
C +P +N + L L + G G+ P + NCS + L LS N L G +P + L
Sbjct: 386 CQNP-KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 128 -----------------VGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIP 170
V L +L L N+ +G IPS L+NCT LN + L +NR +G+IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 171 PQLGQLGRLKSFSVANNLLSGSIPT 195
+G+L L ++NN SG+IP
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPA 529
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 25/117 (21%)
Query: 129 GFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQL------------ 176
G + LD+S N SG IP + + YL L L HN SG IP ++G L
Sbjct: 629 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 177 --GR----------LKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQGLCGEPLDAC 220
GR L ++NN LSG IP T NN GLCG PL C
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRC 745
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 27/159 (16%)
Query: 78 DENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLP---------------- 121
D + + +L ++ L G F R I C+ + L++SSN+ GP+P
Sbjct: 218 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENK 277
Query: 122 ------DDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIP-PQLG 174
D +S LT LDLS N+F G++P +C+ L SL L N FSG++P L
Sbjct: 278 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 337
Query: 175 QLGRLKSFSVANNLLSGSIP-TFVNLT---LSADSVTNN 209
++ LK ++ N SG +P + NL+ L+ D +NN
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 376
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 31/163 (19%)
Query: 81 RVLNLRLTDMGLKGQFPRGIRNCS-SMTGLDLSSNKLYGP-LPD-------DISKLV--- 128
+VL+L + G+ P + N S S+ LDLSSN GP LP+ + +L
Sbjct: 343 KVLDLSFNE--FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 400
Query: 129 -GF-------------LTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLG 174
GF L SL LS N SG+IPS+L + + L LKL N G+IP +L
Sbjct: 401 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 460
Query: 175 QLGRLKSFSVANNLLSGSIPT-FVNLT-LSADSVTNNQGLCGE 215
+ L++ + N L+G IP+ N T L+ S++NN+ L GE
Sbjct: 461 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR-LTGE 502
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 77 PDEN---RVLN-LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPD 122
PDE R LN L L+ L G+ P+ + + +T +DLS+N L GP+P+
Sbjct: 670 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 45/155 (29%)
Query: 85 LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTS----------- 133
L+L++ G P + +C S+ LDL++N G +P + K G + +
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYI 575
Query: 134 ----------------------------------LDLSSNNFSGSIPSNLANCTYLNSLK 159
+++S + G N + L
Sbjct: 576 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 635
Query: 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194
+ +N SG IP ++G + L ++ +N +SGSIP
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQ--DSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L+ S+ +K L+ +++ ++F+ E + +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 128
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 184
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 227
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 285
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 286 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 331
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 332 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 362
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 24/145 (16%)
Query: 74 CWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKL------ 127
C +P +N + L L + G G+ P + NCS + L LS N L G +P + L
Sbjct: 389 CQNP-KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 128 -----------------VGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIP 170
V L +L L N+ +G IPS L+NCT LN + L +NR +G+IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 171 PQLGQLGRLKSFSVANNLLSGSIPT 195
+G+L L ++NN SG+IP
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPA 532
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 25/117 (21%)
Query: 129 GFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQL------------ 176
G + LD+S N SG IP + + YL L L HN SG IP ++G L
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 177 --GR----------LKSFSVANNLLSGSIPTFVNL-TLSADSVTNNQGLCGEPLDAC 220
GR L ++NN LSG IP T NN GLCG PL C
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRC 748
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 27/159 (16%)
Query: 78 DENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLP---------------- 121
D + + +L ++ L G F R I C+ + L++SSN+ GP+P
Sbjct: 221 DCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENK 280
Query: 122 ------DDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIP-PQLG 174
D +S LT LDLS N+F G++P +C+ L SL L N FSG++P L
Sbjct: 281 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 340
Query: 175 QLGRLKSFSVANNLLSGSIP-TFVNLT---LSADSVTNN 209
++ LK ++ N SG +P + NL+ L+ D +NN
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 31/163 (19%)
Query: 81 RVLNLRLTDMGLKGQFPRGIRNCS-SMTGLDLSSNKLYGP-LPD-------DISKLV--- 128
+VL+L + G+ P + N S S+ LDLSSN GP LP+ + +L
Sbjct: 346 KVLDLSFNE--FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 129 -GF-------------LTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLG 174
GF L SL LS N SG+IPS+L + + L LKL N G+IP +L
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Query: 175 QLGRLKSFSVANNLLSGSIPT-FVNLT-LSADSVTNNQGLCGE 215
+ L++ + N L+G IP+ N T L+ S++NN+ L GE
Sbjct: 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR-LTGE 505
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 77 PDEN---RVLN-LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPD 122
PDE R LN L L+ L G+ P+ + + +T +DLS+N L GP+P+
Sbjct: 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 45/155 (29%)
Query: 85 LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTS----------- 133
L+L++ G P + +C S+ LDL++N G +P + K G + +
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYI 578
Query: 134 ----------------------------------LDLSSNNFSGSIPSNLANCTYLNSLK 159
+++S + G N + L
Sbjct: 579 KNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638
Query: 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194
+ +N SG IP ++G + L ++ +N +SGSIP
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 132
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHRN++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 148
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 206 SDVWAFGVLLWEIAT 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 136
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M G L D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVMEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 140
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV++FG +L E+ T G P + G LS +L + + +G
Sbjct: 198 SDVWAFGVLLWEIATYGMSP---------YPG------IDLSQVYELLEKDYRMERPEGC 242
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
++++ ++ AC P +RP+ E++Q + + + E E
Sbjct: 243 PEKVYELMR-AC---WQWNPSDRPSFAEIHQAFETMFQESSISDEVE 285
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 114/219 (52%), Gaps = 23/219 (10%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSL----MVKRLQDSQ--RSEKEFVAEMATLGSV 357
+ ++GSG GT+YK + + +G ++ +K L ++ ++ EF+ E + S+
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS---VDWPRRLKIAIGAA 414
+ +LV LLG C++ +L V + MP+G L + +H D S ++W + A
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 150
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
+G +L R++HR+++++ +L+ KI+DFGLARL+ + + +G
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA--DGGKMP 205
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTN 512
+ ++A E T + DV+S+G + EL+T G +P +
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 29/287 (10%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 137
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV++FG +L E+ T G P + G LS +L + + +G
Sbjct: 195 SDVWAFGVLLWEIATYGMSP---------YPG------IDLSQVYELLEKDYRMERPEGC 239
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
++++ ++ AC P +RP+ E++Q + + + E E
Sbjct: 240 PEKVYELMR-AC---WQWNPSDRPSFAEIHQAFETMFQESSISDEVE 282
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 135
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 43/286 (15%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G ++ A T + VK ++ S + F+AE + ++++ LV L + K
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 248
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ + M GSL D L D G P+ + + A G A++ IHR+
Sbjct: 249 EPIYIITEFMAKGSLLDFLK--SDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 303
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ KI+DFGLAR V +F + + APE T K
Sbjct: 304 LRAANILVSASLVCKIADFGLAR------------VGAKF-PIKWTAPEAINFGSFTIKS 350
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L+E+VT G P PE + A+++ +
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIR------------------ALERGYRMPRPE 392
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDE 597
N + + C P+ERPT +++++++ + ++ TE +
Sbjct: 393 NCPEELYNIMMRC-WKNRPEERPT----FEYIQSVLDDFYTATESQ 433
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 294 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKA-LLEDGTSLMVKRL------QDSQRSEK- 345
K RL L A N IG G G ++K L++D + + +K L +++ EK
Sbjct: 10 KSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 346 -EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404
EF E+ + ++ + N+V L G M R+ V + +P G LY H D + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGL-MHNPPRM-VMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD--DDFEP---KISDFGLARLMNP 459
+L++ + A G ++ N NP I+HR++ S I L D+ P K++DFG ++
Sbjct: 123 VKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ--- 178
Query: 460 IDTHLSTFVNGEFGDLGYVAPEY--ARTLVATPKGDVYSFGTVLLELVTGERP 510
H V+G G+ ++APE A T K D YSF +L ++TGE P
Sbjct: 179 -SVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 140
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 137
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 145
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 201
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ +
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 137
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IGSG+ G ++ + + +K +++ SE +F+ E + + + LV L G C+ +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
LV++ M +G L D L + L + + G A+L C +IHR+
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+ ++ K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 205
Query: 493 DVYSFGTVLLELVT 506
DV+SFG ++ E+ +
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 139
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 197 SDVWAFGVLLWEIAT 211
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G ++ T + +K L+ S + F+ E + +++ LV L +++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSE 84
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++M G L D L + GK + P+ + +A A G A++ +HR+
Sbjct: 85 EPIYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
+ + IL+ ++ K++DFGLARL I+ + T G + + APE A T K
Sbjct: 140 LRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 493 DVYSFGTVLLELVTGER 509
DV+SFG +L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQD---SQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+ +G ++K + G ++VK L+ S R ++F E L + N++P+LG C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 370 MA--KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427
+ L+ MP GSLY++LH + T VD + +K A+ ARG A+L H P
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLH--EGTNFVVDQSQAVKFALDMARGMAFL-HTLEPL 133
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I ++S+ +++D+D +IS D S G +VAPE L
Sbjct: 134 IPRHALNSRSVMIDEDMTARISM---------ADVKFSFQSPGRMYAPAWVAPE---ALQ 181
Query: 488 ATPK------GDVYSFGTVLLELVTGERP 510
P+ D++SF +L ELVT E P
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 294 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKA-LLEDGTSLMVKRL------QDSQRSEK- 345
K RL L A N IG G G ++K L++D + + +K L +++ EK
Sbjct: 10 KSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 346 -EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404
EF E+ + ++ + N+V L G M R+ V + +P G LY H D + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGL-MHNPPRM-VMEFVPCGDLY---HRLLDKAHPIKWS 122
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD--DDFEP---KISDFGLARLMNP 459
+L++ + A G ++ N NP I+HR++ S I L D+ P K++DF L++
Sbjct: 123 VKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ--- 178
Query: 460 IDTHLSTFVNGEFGDLGYVAPEY--ARTLVATPKGDVYSFGTVLLELVTGERP 510
H V+G G+ ++APE A T K D YSF +L ++TGE P
Sbjct: 179 -SVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 135
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 135
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQ--DSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L+ S+ +K L+ +++ ++F+ E + +
Sbjct: 40 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 155
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 211
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ +I+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMRIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 135
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V ++M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL R++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ +
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID + T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 22/229 (9%)
Query: 300 LMKATNSFSKNNIIGSGRTGTMYKAL-LEDG------TSLMVKRLQDSQRSEKEFVAEMA 352
++K T K ++GSG GT+YK + + DG ++ V R S ++ KE + E
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGK--SVDWPRRLKIA 410
+ V + + LLG C+ +L V + MP G L D H ++ G+ S D L
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLD--HVRENRGRLGSQDL---LNWC 125
Query: 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG 470
+ A+G ++L + R++HR+++++ +L+ KI+DFGLARL++ +T +G
Sbjct: 126 MQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA--DG 180
Query: 471 EFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
+ ++A E T + DV+S+G + EL+T G +P + A E
Sbjct: 181 GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 229
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 135
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKT-TNGRLP-VKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 40/276 (14%)
Query: 327 EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383
++ ++ VK L+D +++ + V+EM + + K++N++ LLG C ++ ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 384 NGSLYDLLHPADDTGKSVDW-----PRR-------LKIAIGAARGFAWLHHNCNPRIIHR 431
G+L + L G + P + ARG +L + + IHR
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHR 181
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ +L+ ++ KI+DFGLAR +N ID T NG + ++APE V T +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKT-TNGRLP-VKWMAPEALFDRVYTHQ 239
Query: 492 GDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550
DV+SFG ++ E+ T G P + G VE + +L G D C
Sbjct: 240 SDVWSFGVLMWEIFTLGGSP---------YPGIPVEELFKLLKEGHRMDKPANCT----- 285
Query: 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
NEL+ ++ + V P +RPT ++ + L I
Sbjct: 286 -NELYMMMRDCWHAV----PSQRPTFKQLVEDLDRI 316
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 135
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 140
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT+ T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DTY--TAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 136
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT T G + + APE + K
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQ--DSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L+ S+ +K L+ +++ ++F+ E + +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V + M NGSL L D + L+ G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 128
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 184
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V+ L +A + +L IHR
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHR 140
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT T G + + APE + K
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IGSG+ G ++ + + +K +++ SE++F+ E + + + LV L G C+ +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
LV + M +G L D L + L + + G A+L C +IHR+
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+ ++ K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 186
Query: 493 DVYSFGTVLLELVT 506
DV+SFG ++ E+ +
Sbjct: 187 DVWSFGVLMWEVFS 200
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAH---AERIDHIKLLQYTSQICKGMEYL---G 134
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 134
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 136
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 133
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT T G + + APE + K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 131
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V + M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 133
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT + +F + + APE + K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DT-FTAHAGAKF-PIKWTAPESLAYNKFSIK 190
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 131
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRSEKEFVAEMATL 354
+ ATN S + ++G+G G + L E ++ ++ +++ ++F+ E + +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAA 414
G + N++ L G K ++V + M NGSL L D + L+ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIA 157
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
G +L + +HR+++++ IL++ + K+SDFGL+R++ D + G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIP 213
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ + +PE T DV+S+G VL E+++ GERP
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 138
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 162
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 310 NNIIGSGRTGTM-YKALLEDG---TSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLV 363
IIGSG +G + Y L G + +K L+ ++R ++F++E + +G + N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF-AWLHH 422
L G + ++V ++M NGSL L D + +G RG A + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ-------LVGMLRGVGAGMRY 166
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
+ +HR+++++ +L+D + K+SDFGL+R++ T G+ + + APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI-PIRWTAPEA 225
Query: 483 ARTLVATPKGDVYSFGTVLLE-LVTGERP 510
+ DV+SFG V+ E L GERP
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 149
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 130
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 137
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 149
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 131
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 129
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ +++P GSL D L + +D + L+ +G +L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 135
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 313 IGSGRTGTMYKALLEDGT-SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
+G G+ G +Y+ + + + ++ VK L++ +EF+ E A + +K+ NLV LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431
+ ++ + M G+L D L + + V L +A + +L IHR
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHR 133
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+++++ L+ ++ K++DFGL+RLM DT T G + + APE + K
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTG-DT--XTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 492 GDVYSFGTVLLELVT 506
DV++FG +L E+ T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 310 NNIIGSGRTGTM-YKALLEDG---TSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLV 363
IIGSG +G + Y L G + +K L+ ++R ++F++E + +G + N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF-AWLHH 422
L G + ++V ++M NGSL L D + +G RG A + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ-------LVGMLRGVGAGMRY 166
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
+ +HR+++++ +L+D + K+SDFGL+R++ T G+ + + APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI-PIRWTAPEA 225
Query: 483 ARTLVATPKGDVYSFGTVLLE-LVTGERP 510
+ DV+SFG V+ E L GERP
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 111/257 (43%), Gaps = 45/257 (17%)
Query: 311 NIIGSGRTGTMYKA-LLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
I GR G ++KA L+ D ++ + LQD Q + E E+ + +K+ NL L F
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENL---LQFI 75
Query: 370 MAKK-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH 422
A+K E L+ GSL D L G + W +A +RG ++LH
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHE 130
Query: 423 NC--------NPRIIHRNISSKCILLDDDFEPKISDFGLARLMN----PIDTHLSTFVNG 470
+ P I HR+ SK +LL D ++DFGLA P DTH G
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH------G 184
Query: 471 EFGDLGYVAPEYARTLV-----ATPKGDVYSFGTVLLELVTGERPTNVAKAP-ETFKGNL 524
+ G Y+APE + A + D+Y+ G VL ELV+ A P + +
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS---RCKAADGPVDEYMLPF 241
Query: 525 VEWIAQLSSTGQLQDAI 541
E I Q S +LQ+ +
Sbjct: 242 EEEIGQHPSLEELQEVV 258
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 47/323 (14%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L PA + P + ++
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 195
Query: 469 NGEFGDLG--YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 247
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
+ + G L D D C + LF+ +++ PK RP+ E+ ++
Sbjct: 248 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEIISSIKEE 297
Query: 587 GE------RYHFTTEDEIMLPSD 603
E ++++ E+++ P +
Sbjct: 298 MEPGFREVSFYYSEENKLPEPEE 320
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L PA + P + ++
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 185
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 237
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 238 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 280
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 299 DLMKATNSFSKN---------NIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQRS 343
D +A + F+K +IG+G G + L E ++ ++ +++
Sbjct: 7 DPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ 66
Query: 344 EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDW 403
++F+ E + +G + N++ L G K ++V ++M NGSL L D +
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQ- 125
Query: 404 PRRLKIAIGAARGF-AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462
+G RG A + + + +HR+++++ IL++ + K+SDFGL+R++ D
Sbjct: 126 ------LVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DP 178
Query: 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ G + + APE T DV+S+G V+ E+V+ GERP
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 145/323 (44%), Gaps = 47/323 (14%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 195
Query: 469 NGEFGDLG--YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 247
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586
+ + G L D D C + LF+ +++ PK RP+ E+ ++
Sbjct: 248 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQYN----PKMRPSFLEIISSIKEE 297
Query: 587 GE------RYHFTTEDEIMLPSD 603
E ++++ E+++ P +
Sbjct: 298 MEPGFREVSFYYSEENKLPEPEE 320
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
++G G G + KA + +K++ +S+ K F+ E+ L V + N+V L G C
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 370 MAKKERLLVYKHMPNGSLYDLLH-----PADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
+ LV ++ GSLY++LH P ++ W + ++G A+LH
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQ 122
Query: 425 NPRIIHRNISSKCILL-DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+IHR++ +LL KI DFG A I TH++ G ++APE
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTN----NKGSAAWMAPEVF 175
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517
+ K DV+S+G +L E++T +P + P
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 134 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 186
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 238
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 239 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 281
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 311 NIIGSGRTGTMYKA-LLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+ GR G ++KA LL + ++ + +QD Q + E+ E+ +L +K+ N++ +G
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG-- 85
Query: 370 MAKK-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH 422
A+K + L+ GSL D L V W IA ARG A+LH
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHE 139
Query: 423 NC-------NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
+ P I HR+I SK +LL ++ I+DFGLA + T +G+ G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT--HGQVGTR 197
Query: 476 GYVAPEYARTLV-----ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQ 530
Y+APE + A + D+Y+ G VL EL + R T + + E I Q
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYMLPFEEEIGQ 255
Query: 531 LSSTGQLQDAI 541
S +Q+ +
Sbjct: 256 HPSLEDMQEVV 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
++G G G + KA + +K++ +S+ K F+ E+ L V + N+V L G C
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 370 MAKKERLLVYKHMPNGSLYDLLH-----PADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
+ LV ++ GSLY++LH P ++ W + ++G A+LH
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQ 123
Query: 425 NPRIIHRNISSKCILL-DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+IHR++ +LL KI DFG A I TH++ G ++APE
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTN----NKGSAAWMAPEVF 176
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517
+ K DV+S+G +L E++T +P + P
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 210
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 165 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 217
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 269
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 270 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 312
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 182
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 234
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 235 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 277
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 188
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 240
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 241 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 189
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 241
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 242 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD----YYR 188
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 240
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 241 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 283
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IGSG+ G ++ + + +K +++ SE++F+ E + + + LV L G C+ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
LV++ M +G L D L + L + + G A+L +IHR+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L+ ++ K+SDFG+ R + +D ++ +F + + +PE + K
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKF-PVKWASPEVFSFSRYSSKS 185
Query: 493 DVYSFGTVLLELVT 506
DV+SFG ++ E+ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 25/230 (10%)
Query: 298 SDLMKATNSFSKN---------NIIGSGRTGTMYKALLE----DGTSLMVKRLQ--DSQR 342
D +A + F+K +IG+G G + L+ ++ +K L+ +++
Sbjct: 27 EDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 343 SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVD 402
++F+ E + +G + N+V L G K ++V + M NG+L L D +
Sbjct: 87 QRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ 146
Query: 403 WPRRLKIAIGAARGFAW-LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461
+G RG A + + + +HR+++++ IL++ + K+SDFGL+R++
Sbjct: 147 -------LVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ T G+ + + APE + T DV+S+G V+ E+++ GERP
Sbjct: 200 EAVYTTTGGKI-PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR---- 189
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 241
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + LF+ +++ PK RP+ E+
Sbjct: 242 QVLRFVMEGGLLDKPDNC------PDMLFELMRMCWQ----YNPKMRPSFLEI 284
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 138/317 (43%), Gaps = 58/317 (18%)
Query: 307 FSKNNI-----IGSGRTGTMYKAL------LEDGTSLMVKRLQD--SQRSEKEFVAEMAT 353
+ +NNI IG G G +++A E T + VK L++ S + +F E A
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 354 LGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL------------HPADDTGKSV 401
+ N N+V LLG C K L++++M G L + L H T V
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 402 DWP--------RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453
P +L IA A G A+L + +HR+++++ L+ ++ KI+DFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTN 512
+R + D + + + + ++ PE T + DV+++G VL E+ + G +P
Sbjct: 221 SRNIYSADYYKAD--GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP-- 276
Query: 513 VAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKE 572
+ G E + G + + C + EL+ +++ + +P +
Sbjct: 277 -------YYGMAHEEVIYYVRDGNILACPENCPL------ELYNLMRLCWS----KLPAD 319
Query: 573 RPTMFEVYQFLRAIGER 589
RP+ +++ L+ + ER
Sbjct: 320 RPSFCSIHRILQRMCER 336
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 149
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 313 IGSGRTGTM----YKALLED-GTSLMVKRLQDSQRSE-KEFVAEMATLGSVKNRNLVPLL 366
+G G G++ Y L ++ G + VK+LQ S ++F E+ L S+++ N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 367 GFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
G C + R L+ + +P GSL + L + +D + L+ +G +L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE---RIDHIKLLQYTSQICKGMEYL---G 134
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
R IHR+++++ IL++++ KI DFGL +++ P D + + APE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 485 TLVATPKGDVYSFGTVLLELVT 506
+ DV+SFG VL EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 90
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 146
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 88
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 144
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 149
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 111
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 167
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 91
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 147
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 85
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 141
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 311 NIIGSGRTGTMYKALLE----DGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+IG+G G + L+ + +K L+ +++ ++F++E + +G + N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L G +++ + M NGSL L D + L+ G A G +L
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---A 152
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG--YVAPEY 482
+ +HR+++++ IL++ + K+SDFGL+R + DT T+ + G + + APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEA 211
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ T DV+S+G V+ E+++ GERP
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 92
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 148
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 112
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 168
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + + G + ++A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 94
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 150
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M +D + N L ++A
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--LDKEFDSVHNKTGAKLPVKWMA 206
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 312 IIGSGRTGTMYKALLE----DGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPL 365
+IG+G G + + L+ + + +K L+ ++R +EF++E + +G ++ N++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA-WLHHNC 424
G +++ + M NG+L L D + +G RG A + +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-------LVGMLRGIASGMRYLA 133
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLM--NPIDTHLSTFVNGEFGDLGYVAPEY 482
+HR+++++ IL++ + K+SDFGL+R + N D ++ + G+ + + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI-PIRWTAPEA 192
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
T D +S+G V+ E+++ GERP
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 311 NIIGSGRTGTMYKALLE----DGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+IG+G G + L+ + +K L+ +++ ++F++E + +G + N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L G +++ + M NGSL L D + L+ G A G +L
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---A 126
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD--LGYVAPEY 482
+ +HR ++++ IL++ + K+SDFGL+R + DT T+ + G + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED-DTSDPTYTSALGGKIPIRWTAPEA 185
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ T DV+S+G V+ E+++ GERP
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 92
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 148
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + +HR+++++ +LD+ F K++DFGLAR M + G + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+T T K DV+SFG +L EL+T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 187
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQD---SQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+ +G ++K + G ++VK L+ S R ++F E L + N++P+LG C
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 370 MAKK--ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427
+ L+ P GSLY++LH + T VD + +K A+ ARG A+L H P
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLH--EGTNFVVDQSQAVKFALDXARGXAFL-HTLEPL 133
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I ++S+ + +D+D +IS D S G +VAPE L
Sbjct: 134 IPRHALNSRSVXIDEDXTARISX---------ADVKFSFQSPGRXYAPAWVAPE---ALQ 181
Query: 488 ATPK------GDVYSFGTVLLELVTGERP 510
P+ D +SF +L ELVT E P
Sbjct: 182 KKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 129
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 186
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 125
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 182
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 202
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 136
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKF-PVRWSPPEVLMYSKFSSKS 193
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 91
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 147
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M D + N L ++A
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 203
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 94
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 150
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M D + N L ++A
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 206
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ ++ +DF KI DFG+ R + D
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR---- 180
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 232
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + L + +++ PK RP+ E+
Sbjct: 233 QVLRFVMEGGLLDKPDNC------PDMLLELMRMCWQ----YNPKMRPSFLEI 275
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 98
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 154
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN--GEFGDLGYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M D + N G + ++A
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 210
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 149
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M D + N L ++A
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 205
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 312 IIGSGRTGTMYKALLE----DGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPL 365
+IG+G G + + L+ + + +K L+ ++R +EF++E + +G ++ N++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA-WLHHNC 424
G +++ + M NG+L L D + +G RG A + +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ-------LVGMLRGIASGMRYLA 135
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLM--NPIDTHLSTFVNGEFGDLGYVAPEY 482
+HR+++++ IL++ + K+SDFGL+R + N D ++ + G+ + + APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI-PIRWTAPEA 194
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
T D +S+G V+ E+++ GERP
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 93
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 149
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN--GEFGDLGYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M D + N G + ++A
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 205
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 310 NNIIGSGRTGTMYKALL--EDGTSLM-----VKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
N +IG G G +Y L DG + + R+ D +F+ E + + N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNV 152
Query: 363 VPLLGFCM-AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ LLG C+ ++ L+V +M +G L + + D + + A+G +L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL- 208
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN--GEFGDLGYVA 479
+ + +HR+++++ +LD+ F K++DFGLAR M D + N G + ++A
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEFDSVHNKTGAKLPVKWMA 264
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERP 510
E +T T K DV+SFG +L EL+T P
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ V +F + + PE + K
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEETSSVGSKF-PVRWSPPEVLMYSKFSSKS 202
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMATL 354
A + + +G G G +Y+ + E T + +K + + S R EF+ E + +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 355 GSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWP---RRLK 408
++V LLG + L++ + M G L L P + + P + ++
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468
+A A G A+L+ N + +HR+++++ + +DF KI DFG+ R + D +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD----YYR 182
Query: 469 NGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G G L +++PE + V T DV+SFG VL E+ T +A+ P ++G E
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------LAEQP--YQGLSNE 234
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
+ + G L D D C + L + +++ PK RP+ E+
Sbjct: 235 QVLRFVMEGGLLDKPDNC------PDMLLELMRMCWQ----YNPKMRPSFLEI 277
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 17/217 (7%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMV----KRLQDS--QRSEKEFVA 349
L+ + K T K ++GSG GT++K + + +G S+ + K ++D ++S +
Sbjct: 24 LARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
M +GS+ + ++V LLG C +L V +++P GSL D H G ++ L
Sbjct: 83 HMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLD--HVRQHRG-ALGPQLLLNW 138
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
+ A+G +L + ++HRN++++ +LL + +++DFG+A L+ P D L +
Sbjct: 139 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL--LYS 193
Query: 470 GEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+ ++A E T + DV+S+G + EL+T
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 120/236 (50%), Gaps = 21/236 (8%)
Query: 297 LSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMV----KRLQDS--QRSEKEFVA 349
L+ + K T K ++GSG GT++K + + +G S+ + K ++D ++S +
Sbjct: 6 LARIFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
M +GS+ + ++V LLG C +L V +++P GSL D H G ++ L
Sbjct: 65 HMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLD--HVRQHRG-ALGPQLLLNW 120
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
+ A+G +L + ++HRN++++ +LL + +++DFG+A L+ P D L +
Sbjct: 121 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL--LYS 175
Query: 470 GEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP---TNVAKAPETFK 521
+ ++A E T + DV+S+G + EL+T G P +A+ P+ +
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 329 GTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLG--FCMAKKERLLVYKHMPNG 385
G + VK+LQ S +++F E+ L ++ + +V G + + E LV +++P+G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445
L D L +D R L + +G +L R +HR+++++ IL++ +
Sbjct: 96 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 149
Query: 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
KI+DFGLA+L+ P+D + + APE + + + DV+SFG VL EL
Sbjct: 150 VKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
Query: 506 T 506
T
Sbjct: 209 T 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 27/249 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ L ++ + +++ G C + E+ LV +++P GSL D L S+ + L
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLL 120
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
A G A+LH + IHRN++++ +LLD+D KI DFGLA+ + +
Sbjct: 121 LFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTG-----ERPTNVAKAPETFKG 522
+G+ + + APE + DV+SFG L EL+T PT + +G
Sbjct: 178 EDGD-SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 236
Query: 523 NL-VEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581
+ V + +L G+ DKC E++ +K NC T RPT +
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPC------EVYHLMK---NC-WETEASFRPTFENLIP 286
Query: 582 FLRAIGERY 590
L+ + E+Y
Sbjct: 287 ILKTVHEKY 295
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 339 DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG 398
D QR ++F++E + +G + N++ L G K +++ ++M NGSL L D
Sbjct: 56 DKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 113
Query: 399 KSVDWPRRLKIAIGAARGF-AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457
+ +G RG + + + + +HR+++++ IL++ + K+SDFG++R++
Sbjct: 114 TVIQ-------LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
Query: 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
D + G + + APE T DV+S+G V+ E+++ GERP
Sbjct: 167 ED-DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 339 DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG 398
D QR ++F++E + +G + N++ L G K +++ ++M NGSL L D
Sbjct: 50 DKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 107
Query: 399 KSVDWPRRLKIAIGAARGF-AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457
+ +G RG + + + + +HR+++++ IL++ + K+SDFG++R++
Sbjct: 108 TVIQ-------LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
Query: 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
D + G + + APE T DV+S+G V+ E+++ GERP
Sbjct: 161 ED-DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 339 DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG 398
D QR ++F++E + +G + N++ L G K +++ ++M NGSL L D
Sbjct: 71 DKQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 399 KSVDWPRRLKIAIGAARGF-AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457
+ +G RG + + + + +HR+++++ IL++ + K+SDFG++R++
Sbjct: 129 TVIQ-------LVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
D + G + + APE T DV+S+G V+ E+++ GERP
Sbjct: 182 ED-DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 27/249 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ L ++ + +++ G C + E+ LV +++P GSL D L S+ + L
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLL 120
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
A G A+LH IHRN++++ +LLD+D KI DFGLA+ + +
Sbjct: 121 LFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTG-----ERPTNVAKAPETFKG 522
+G+ + + APE + DV+SFG L EL+T PT + +G
Sbjct: 178 EDGD-SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 236
Query: 523 NL-VEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581
+ V + +L G+ DKC E++ +K NC T RPT +
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPC------EVYHLMK---NC-WETEASFRPTFENLIP 286
Query: 582 FLRAIGERY 590
L+ + E+Y
Sbjct: 287 ILKTVHEKY 295
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 313 IGSGRTGTMYKALLED--GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCM 370
IG G G + +L D G + VK +++ ++ F+AE + + +++ NLV LLG +
Sbjct: 20 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 371 AKKERL-LVYKHMPNGSLYDLLHPADDTGKSV-DWPRRLKIAIGAARGFAWLHHNCNPRI 428
+K L +V ++M GSL D L G+SV LK ++ +L N
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVA 488
+HR+++++ +L+ +D K+SDFGL + + ST G+ + + APE R
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKL-PVKWTAPEALREAAF 182
Query: 489 TPKGDVYSFGTVLLELVTGER 509
+ K DV+SFG +L E+ + R
Sbjct: 183 STKSDVWSFGILLWEIYSFGR 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G+G+ G + + +K +++ SE EF+ E + ++ + LV L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ ++ ++M NG L + L ++ + L++ +L + + +HR+
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
++++ L++D K+SDFGL+R + +D ++ +F + + PE + K
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKF-PVRWSPPEVLMYSKFSSKS 187
Query: 493 DVYSFGTVLLELVT-----GERPTNVAKAPETFKG 522
D+++FG ++ E+ + ER TN A +G
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 50/226 (22%)
Query: 312 IIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF--- 368
+IG GR G +YK L D + VK + R + F+ E KN VPL+
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINE-------KNIYRVPLMEHDNI 69
Query: 369 -----------CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ E LLV ++ PNGSL L + + DW ++A RG
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGL 124
Query: 418 AWLH------HNCNPRIIHRNISSKCILLDDDFEPKISDFGLA------RLMNPIDTHLS 465
A+LH + P I HR+++S+ +L+ +D ISDFGL+ RL+ P + +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 466 TFVNGEFGDLGYVAPEYARTLV-------ATPKGDVYSFGTVLLEL 504
E G + Y+APE V A + D+Y+ G + E+
Sbjct: 185 AI--SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG-- 476
+L+ + +HRN++++ ++ DF KI DFG+ R + D + G G L
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVR 198
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 250
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C P + RPT E+ L+
Sbjct: 251 YLDQPDNC-------PERVTDLMRMCWQFNPNM---RPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG-- 476
+L+ + +HRN++++ ++ DF KI DFG+ R + D + G G L
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVR 197
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 249
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C P + RPT E+ L+
Sbjct: 250 YLDQPDNC-------PERVTDLMRMCWQFNPNM---RPTFLEIVNLLK 287
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 329 GTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLG--FCMAKKERLLVYKHMPNG 385
G + VK+LQ S +++F E+ L ++ + +V G + ++ LV +++P+G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445
L D L +D R L + +G +L R +HR+++++ IL++ +
Sbjct: 112 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 165
Query: 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
KI+DFGLA+L+ P+D + + APE + + + DV+SFG VL EL
Sbjct: 166 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 506 T 506
T
Sbjct: 225 T 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 329 GTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLG--FCMAKKERLLVYKHMPNG 385
G + VK+LQ S +++F E+ L ++ + +V G + ++ LV +++P+G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445
L D L +D R L + +G +L R +HR+++++ IL++ +
Sbjct: 100 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 153
Query: 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
KI+DFGLA+L+ P+D + + APE + + + DV+SFG VL EL
Sbjct: 154 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
Query: 506 T 506
T
Sbjct: 213 T 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 312 IIGSGRTGTMYKALLEDGTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
++G G G K + +MV + ++ + +++ F+ E+ + +++ N++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
K + +++ G+L ++ D W +R+ A A G A+LH + II
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLH---SMNII 130
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE----------FGDLGYVA 479
HR+++S L+ ++ ++DFGLARLM T + + G+ ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 480 PEYARTLVATPKGDVYSFGTVLLELV 505
PE K DV+SFG VL E++
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 329 GTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLG--FCMAKKERLLVYKHMPNG 385
G + VK+LQ S +++F E+ L ++ + +V G + ++ LV +++P+G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445
L D L +D R L + +G +L R +HR+++++ IL++ +
Sbjct: 99 CLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAH 152
Query: 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
KI+DFGLA+L+ P+D + + APE + + + DV+SFG VL EL
Sbjct: 153 VKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 506 T 506
T
Sbjct: 212 T 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRNLVPLLGFC 369
IG G G +YKA G + +K+++ + E + E++ L +K+ N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
KK +LV++H+ + L LL + +SV L + G A+ H + R++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVL 122
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVAPE------- 481
HR++ + +L++ + E KI+DFGLAR P+ + V L Y AP+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT-----LWYRAPDVLMGSKK 177
Query: 482 YARTLVATPKGDVYSFGTVLLELVTG 507
Y+ T+ D++S G + E+V G
Sbjct: 178 YSTTI------DIWSVGCIFAEMVNG 197
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--G 476
+L+ + +HR+++++ ++ DF KI DFG+ R + D + G G L
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVR 196
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 248
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C PK RPT E+ L+
Sbjct: 249 YLDQPDNC-------PERVTDLMRMC---WQFNPKMRPTFLEIVNLLK 286
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 313 IGSGRTGTMYKALLED--GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCM 370
IG G G + +L D G + VK +++ ++ F+AE + + +++ NLV LLG +
Sbjct: 201 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 371 AKKERL-LVYKHMPNGSLYDLLHPADDTGKSV-DWPRRLKIAIGAARGFAWLHHNCNPRI 428
+K L +V ++M GSL D L G+SV LK ++ +L N
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVA 488
+HR+++++ +L+ +D K+SDFGL + + ST G+ + + APE R
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKL-PVKWTAPEALREKKF 363
Query: 489 TPKGDVYSFGTVLLELVTGER 509
+ K DV+SFG +L E+ + R
Sbjct: 364 STKSDVWSFGILLWEIYSFGR 384
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG-- 476
+L+ + +HR+++++ ++ DF KI DFG+ R + D + G G L
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVR 197
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 249
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C PK RPT E+ L+
Sbjct: 250 YLDQPDNC-------PERVTDLMRMC---WQFNPKMRPTFLEIVNLLK 287
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 313 IGSGRTGTMYKALLED--GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCM 370
IG G G + +L D G + VK +++ ++ F+AE + + +++ NLV LLG +
Sbjct: 29 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 371 AKKERL-LVYKHMPNGSLYDLLHPADDTGKSV-DWPRRLKIAIGAARGFAWLHHNCNPRI 428
+K L +V ++M GSL D L G+SV LK ++ +L N
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVA 488
+HR+++++ +L+ +D K+SDFGL + + ST G+ + + APE R
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKL-PVKWTAPEALREKKF 191
Query: 489 TPKGDVYSFGTVLLELVTGER 509
+ K DV+SFG +L E+ + R
Sbjct: 192 STKSDVWSFGILLWEIYSFGR 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 313 IGSGRTGTMYKALLED--GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCM 370
IG G G + +L D G + VK +++ ++ F+AE + + +++ NLV LLG +
Sbjct: 14 IGKGEFGDV---MLGDYRGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 371 AKKERL-LVYKHMPNGSLYDLLHPADDTGKSV-DWPRRLKIAIGAARGFAWLHHNCNPRI 428
+K L +V ++M GSL D L G+SV LK ++ +L N
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVA 488
+HR+++++ +L+ +D K+SDFGL + + ST G+ + + APE R
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKL-PVKWTAPEALREKKF 176
Query: 489 TPKGDVYSFGTVLLELVTGER 509
+ K DV+SFG +L E+ + R
Sbjct: 177 STKSDVWSFGILLWEIYSFGR 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRNLVPLLGFC 369
IG G G +YKA G + +K+++ + E + E++ L +K+ N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
KK +LV++H+ + L LL + +SV L + G A+ H + R++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVL 122
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVAPE------- 481
HR++ + +L++ + E KI+DFGLAR P+ + V L Y AP+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT-----LWYRAPDVLMGSKK 177
Query: 482 YARTLVATPKGDVYSFGTVLLELVTG 507
Y+ T+ D++S G + E+V G
Sbjct: 178 YSTTI------DIWSVGCIFAEMVNG 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 28/258 (10%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG-----NLVEWIA-----QL 531
+ + + D++S G L+E+ G P A E + L+++I +L
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKL 233
Query: 532 SS---TGQLQDAIDKCLV 546
S + + QD ++KCL+
Sbjct: 234 PSGVFSLEFQDFVNKCLI 251
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV--KNRNLVPLLGFCM 370
+G GR G +++ L G S+ VK S R E+ + E +V ++ N++ + M
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIF--SSRDEQSWFRETEIYNTVLLRHDNILGFIASDM 72
Query: 371 AKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC-- 424
+ + L+ + +GSLYD L ++++ L++A+ AA G A LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 425 ---NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
P I HR+ S+ +L+ + + I+D GLA + + +L N G Y+APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 482 YARTLVAT------PKGDVYSFGTVLLEL 504
+ T D+++FG VL E+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRNLVPLLGFC 369
IG G G +YKA G + +K+++ + E + E++ L +K+ N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
KK +LV++H+ + L LL + +SV L + G A+ H + R++
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVL 122
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVAPEYARTLVA 488
HR++ + +L++ + E KI+DFGLAR P+ + V L Y AP+ L+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVT-----LWYRAPD---VLMG 174
Query: 489 TPKG----DVYSFGTVLLELVTG 507
+ K D++S G + E+V G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F + + +G+G G + K +M ++L + + + E+ L +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I RG A+L
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG----KVSIAVLRGLAYLR 131
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y+APE
Sbjct: 132 EKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMAPE 183
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+EL G P A E
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRN 361
+ + +IGSG T + A + +KR L+ Q S E + E+ + + N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS----VDWPRRLKIAIGAARGF 417
+V + K E LV K + GS+ D++ G+ +D I G
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
+LH N IHR++ + ILL +D +I+DFG++ + V F G
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 477 YVAPEYARTLVATP-KGDVYSFGTVLLELVTGERPTN 512
++APE + K D++SFG +EL TG P +
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 305 NSFSKNNIIGSGRTGTM---YKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
+ + +IGSG T + Y A ++ ++ L+ Q S E + E+ + + N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKS----VDWPRRLKIAIGAARGF 417
+V + K E LV K + GS+ D++ G+ +D I G
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
+LH N IHR++ + ILL +D +I+DFG++ + V F G
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 477 YVAPEYARTLVATP-KGDVYSFGTVLLELVTGERPTN 512
++APE + K D++SFG +EL TG P +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 28/255 (10%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL--KIAIGAARGFAW 419
+V G + E + +HM GSL +L A P ++ K++I +G +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI------PEQILGKVSIAVIKGLTY 138
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
L +I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++
Sbjct: 139 LREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMS 190
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA-----QLSS- 533
PE + + + D++S G L+E+ G P L+++I +L S
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF-ELLDYIVNEPPPKLPSG 249
Query: 534 --TGQLQDAIDKCLV 546
+ + QD ++KCL+
Sbjct: 250 VFSLEFQDFVNKCLI 264
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG-- 476
+L+ + +HR+++++ ++ DF KI DFG+ R + D G G L
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----KGGKGLLPVR 197
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 249
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C PK RPT E+ L+
Sbjct: 250 YLDQPDNC-------PERVTDLMRMC---WQFNPKMRPTFLEIVNLLK 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--G 476
+L+ + +HR+++++ ++ DF KI DFG+ R + D G G L
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----KGGKGLLPVR 194
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 246
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C PK RPT E+ L+
Sbjct: 247 YLDQPDNC-------PERVTDLMRMC---WQFNPKMRPTFLEIVNLLK 284
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 43/289 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV-NGEFGDLG- 476
+L+ + +HR+++++ ++ DF KI DFG+ R D + + + G G L
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPV 196
Query: 477 -YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDG 248
Query: 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C PK RPT E+ L+
Sbjct: 249 GYLDQPDNC-------PERVTDLMRMC---WQFNPKMRPTFLEIVNLLK 287
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 42/270 (15%)
Query: 306 SFSKNNII-----GSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMA 352
F + N++ G G G + KA T++ VK L++ S ++ ++E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG------------KS 400
L V + +++ L G C LL+ ++ GSL L + G S
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 401 VDWPRRLKIAIGAARGFAW-----LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455
+D P + +G FAW + + +++HR+++++ IL+ + + KISDFGL+R
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVA 514
+ D+++ G + ++A E + T + DV+SFG +L E+VT G P
Sbjct: 199 DVYEEDSYVKR-SQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---- 252
Query: 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544
+ G E + L TG + D C
Sbjct: 253 -----YPGIPPERLFNLLKTGHRMERPDNC 277
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 18/248 (7%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 124
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID + FV G Y++PE
Sbjct: 125 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMANEFV----GTRSYMSPE 176
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS---TGQLQ 538
+ + + D++S G L+E+ G P E + E +L S + + Q
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQ 236
Query: 539 DAIDKCLV 546
D ++KCL+
Sbjct: 237 DFVNKCLI 244
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV 357
M F+K IG G G ++K + + ++ + L++++ ++ E+ L
Sbjct: 23 MDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ + G + + ++ +++ GS DLL P +D + I +G
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGL 137
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
+LH + + IHR+I + +LL + E K++DFG+A + +TFV F +
Sbjct: 138 DYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF----W 190
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
+APE + K D++S G +EL GE P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 313 IGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ D T + VK + +S R EF+ E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDL---LHPADDTGKSVDWP---RRLKIAIGAARGFA 418
LLG + L+V + M +G L L P + P +++A A G A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG-- 476
+L+ + +HR+++++ ++ DF KI DFG+ R + D G G L
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR----KGGKGLLPVR 197
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
++APE + V T D++SFG VL E+ T++A+ P ++G E + + G
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI------TSLAEQP--YQGLSNEQVLKFVMDGG 249
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
D D C E L C P + RPT E+ L+
Sbjct: 250 YLDQPDNC-------PERVTDLMRMCWQFNPNM---RPTFLEIVNLLK 287
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 40/289 (13%)
Query: 298 SDLMKATNSFSKNN---IIGSGRTGTMYKAL-LEDGTSLMVKRL-QDSQRSEKEFVAEMA 352
SDL++ + +N ++G G G +Y L + + +K + + R + E+A
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH----PADDTGKSVDWPRRLK 408
+K++N+V LG + + +P GSL LL P D +++ + +
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 131
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLARLMNPIDTHLSTF 467
+ G +LH N +I+HR+I +L++ KISDFG ++ + I+ TF
Sbjct: 132 L-----EGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF 183
Query: 468 VNGEFGDLGYVAPEYARTLVATPKG-----DVYSFGTVLLELVTGERPTNVAKAPET--F 520
G L Y+APE + P+G D++S G ++E+ TG+ P P+ F
Sbjct: 184 T----GTLQYMAPE---IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF 236
Query: 521 KGNLVEWIAQL--SSTGQLQDAIDKCLV----AKGVDNELF--QFLKVA 561
K + + ++ S + + + I KC + N+L +FLKV+
Sbjct: 237 KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 307 FSKNNIIGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
F+K IG G G ++K + + ++ + L++++ ++ E+ L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
G + + ++ +++ GS DLL P +D + I +G +LH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH-- 121
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ + IHR+I + +LL + E K++DFG+A + +TFV F ++APE
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF----WMAPEVI 176
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ K D++S G +EL GE P
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+E+ G P A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+E+ G P A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 183
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 184 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 235
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+E+ G P A E
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 148
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 149 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 200
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+E+ G P A E
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+E+ G P A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRL---QDSQRSEKEFVAEMATLGSVKNRN 361
+ F K + +G+G G ++K + +M ++L + + + E+ L +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V G + E + +HM GSL +L A + + K++I +G +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+I+HR++ IL++ E K+ DFG++ + ID+ ++FV G Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV----GTRSYMSPE 173
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518
+ + + D++S G L+E+ G P A E
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 42/270 (15%)
Query: 306 SFSKNNII-----GSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMA 352
F + N++ G G G + KA T++ VK L++ S ++ ++E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 353 TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG------------KS 400
L V + +++ L G C LL+ ++ GSL L + G S
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 401 VDWPRRLKIAIGAARGFAW-----LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455
+D P + +G FAW + + +++HR+++++ IL+ + + KISDFGL+R
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVA 514
+ D+ + G + ++A E + T + DV+SFG +L E+VT G P
Sbjct: 199 DVYEEDSXVKR-SQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---- 252
Query: 515 KAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544
+ G E + L TG + D C
Sbjct: 253 -----YPGIPPERLFNLLKTGHRMERPDNC 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 314 GSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK 373
G + T YK + + ++L E++ L +++ +++ L
Sbjct: 23 GKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT 82
Query: 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNI 433
+ ++V ++ G L+D + + + D RR I A + H +I+HR++
Sbjct: 83 DIVMVIEY-AGGELFDYI--VEKKRMTEDEGRRFFQQIICAIEYCHRH-----KIVHRDL 134
Query: 434 SSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKG 492
+ +LLDD+ KI+DFGL+ +M F+ G Y APE L A P+
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTD-----GNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 493 DVYSFGTVLLELVTGERPTNVAKAPETFK 521
DV+S G VL ++ G P + P FK
Sbjct: 190 DVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + ++ N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + + + LH +I
Sbjct: 87 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 138
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYG 194
Query: 490 PKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWIAQLSSTG-QLQDAIDKCL 545
P+ D++S G +++E+V GE P KA + + NL + L L+ +D+ L
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 254
Query: 546 V 546
V
Sbjct: 255 V 255
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV--KNRNLVPLLGFCM 370
+G GR G +++ + G ++ VK S R EK + E +V ++ N++ + M
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIF--SSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 371 AKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC-- 424
+ + L+ + GSLYD L ++D L+I + A G A LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 425 ---NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
P I HR++ SK IL+ + + I+D GLA + + L N G Y+APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 482 YARTLV------ATPKGDVYSFGTVLLEL 504
+ + + D+++FG VL E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + ++ N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + + + LH +I
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 142
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYG 198
Query: 490 PKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWIAQLSSTG-QLQDAIDKCL 545
P+ D++S G +++E+V GE P KA + + NL + L L+ +D+ L
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 258
Query: 546 V 546
V
Sbjct: 259 V 259
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + ++ N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + + + LH +I
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYG 203
Query: 490 PKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWIAQLSSTG-QLQDAIDKCL 545
P+ D++S G +++E+V GE P KA + + NL + L L+ +D+ L
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 263
Query: 546 V 546
V
Sbjct: 264 V 264
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + ++ N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + + + LH +I
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYG 205
Query: 490 PKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWIAQLSSTG-QLQDAIDKCL 545
P+ D++S G +++E+V GE P KA + + NL + L L+ +D+ L
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 265
Query: 546 V 546
V
Sbjct: 266 V 266
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + ++ N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + + + LH +I
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 192
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYG 248
Query: 490 PKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWIAQLSSTG-QLQDAIDKCL 545
P+ D++S G +++E+V GE P KA + + NL + L L+ +D+ L
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 308
Query: 546 V 546
V
Sbjct: 309 V 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 42/269 (15%)
Query: 307 FSKNNII-----GSGRTGTMYKALL------EDGTSLMVKRLQD--SQRSEKEFVAEMAT 353
F + N++ G G G + KA T++ VK L++ S ++ ++E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 354 LGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTG------------KSV 401
L V + +++ L G C LL+ ++ GSL L + G S+
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 402 DWPRRLKIAIGAARGFAW-----LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456
D P + +G FAW + + ++HR+++++ IL+ + + KISDFGL+R
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAK 515
+ D+ + G + ++A E + T + DV+SFG +L E+VT G P
Sbjct: 200 VYEEDSXVKR-SQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP----- 252
Query: 516 APETFKGNLVEWIAQLSSTGQLQDAIDKC 544
+ G E + L TG + D C
Sbjct: 253 ----YPGIPPERLFNLLKTGHRMERPDNC 277
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV--KNRNLVPLLGFCM 370
+G GR G +++ + G ++ VK S R EK + E +V ++ N++ + M
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF--SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 371 AKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC-- 424
+ + L+ + GSLYD L ++D L+I + A G A LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 425 ---NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
P I HR++ SK IL+ + + I+D GLA + + L N G Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 482 YARTLV------ATPKGDVYSFGTVLLEL 504
+ + + D+++FG VL E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 29/222 (13%)
Query: 307 FSKNNI-----IGSGRTGTMYKALL-----EDGT-SLMVKRLQDSQRS-EKE-FVAEMAT 353
F +NN+ +G+G G + +A ED + VK L+ + + EKE ++E+
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 354 LGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PAD---DTGKSVDWPRR 406
+ + ++ N+V LLG C L++ ++ G L + L AD + G+ ++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 407 LKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPIDTHL 464
L + A+G A+L NC IHR+++++ +LL + KI DFGLAR +MN D++
Sbjct: 155 LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN--DSNY 208
Query: 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
N + ++APE V T + DV+S+G +L E+ +
Sbjct: 209 IVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV--KNRNLVPLLGFCM 370
+G GR G +++ + G ++ VK S R EK + E +V ++ N++ + M
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF--SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 371 AKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC-- 424
+ + L+ + GSLYD L ++D L+I + A G A LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 425 ---NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
P I HR++ SK IL+ + + I+D GLA + + L N G Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 482 YARTLV------ATPKGDVYSFGTVLLEL 504
+ + + D+++FG VL E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 307 FSKNNIIGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
F+K IG G G ++K + + ++ + L++++ ++ E+ L + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
G + + ++ +++ GS DLL P +D + I +G +LH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH-- 136
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ + IHR+I + +LL + E K++DFG+A + + FV F ++APE
Sbjct: 137 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF----WMAPEVI 191
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ K D++S G +EL GE P
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 29/222 (13%)
Query: 307 FSKNNI-----IGSGRTGTMYKALL-----EDGT-SLMVKRLQDSQRS-EKE-FVAEMAT 353
F +NN+ +G+G G + +A ED + VK L+ + + EKE ++E+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 354 LGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---PAD---DTGKSVDWPRR 406
+ + ++ N+V LLG C L++ ++ G L + L AD + G+ ++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 407 LKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPIDTHL 464
L + A+G A+L NC IHR+++++ +LL + KI DFGLAR +MN D++
Sbjct: 163 LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN--DSNY 216
Query: 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
N + ++APE V T + DV+S+G +L E+ +
Sbjct: 217 IVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 307 FSKNNIIGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
F+K IG G G ++K + + ++ + L++++ ++ E+ L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
G + + ++ +++ GS DLL P +D + I +G +LH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH-- 121
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ + IHR+I + +LL + E K++DFG+A + + FV F ++APE
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF----WMAPEVI 176
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ K D++S G +EL GE P
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 328 DGTSLMVK----RLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC--MAKKERLLVYKH 381
DGT MV + + + E+ L ++ + +++ G C LV ++
Sbjct: 57 DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441
+P GSL D L S+ + L A G A+LH IHR+++++ +LLD
Sbjct: 117 VPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLD 168
Query: 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVL 501
+D KI DFGLA+ + +G+ + + APE + DV+SFG L
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGD-SPVFWYAPECLKEYKFYYASDVWSFGVTL 227
Query: 502 LELVTG-----ERPTNVAKAPETFKGNL-VEWIAQLSSTGQLQDAIDKCLVAKGVDNELF 555
EL+T PT + +G + V + +L G+ DKC E++
Sbjct: 228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC------PAEVY 281
Query: 556 QFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590
+K NC T RPT + L+ + E+Y
Sbjct: 282 HLMK---NC-WETEASFRPTFENLIPILKTVHEKY 312
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + ++ N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + + + LH +I
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHAQG---VI 269
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY----WMAPELISRLPYG 325
Query: 490 PKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWIAQLSSTG-QLQDAIDKCL 545
P+ D++S G +++E+V GE P KA + + NL + L L+ +D+ L
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 385
Query: 546 V 546
V
Sbjct: 386 V 386
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLED-GTSLMVK--RLQDSQRSEKEFVAEMATLGSV 357
M +++ F + +G+G T+YK L + G + +K +L + + + E++ + +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAI------ 411
K+ N+V L + + LV++ M N L D+ + PR L++ +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 412 GAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNG 470
+G A+ H N +I+HR++ + +L++ + K+ DFGLAR P++T S V
Sbjct: 116 QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT- 171
Query: 471 EFGDLGYVAPEY---ARTLVATPKGDVYSFGTVLLELVTGE 508
L Y AP+ +RT + D++S G +L E++TG+
Sbjct: 172 ----LWYRAPDVLMGSRTYSTSI--DIWSCGCILAEMITGK 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
GS R G + ++ V + + +E + E + + N +V L+G C A+
Sbjct: 349 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE 408
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWP--RRLKIAIGAARGFAWLHHNCNPRIIH 430
+LV + G L+ L GK + P ++ + G +L +H
Sbjct: 409 A-LMLVMEMAGGGPLHKFL-----VGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVH 459
Query: 431 RNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP 490
RN++++ +LL + KISDFGL++ + D++ + G++ L + APE +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW-PLKWYAPECINFRKFSS 518
Query: 491 KGDVYSFGTVLLE-LVTGERPTNVAKAPETF 520
+ DV+S+G + E L G++P K PE
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 549
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 313 IGSGRTGTMYKALLED-GTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK+ L+ QR E F E+ + + N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSY 111
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ E +V + + G+L D++ T ++ + + + R ++LH N +I
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSVLRALSYLH---NQGVI 163
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+I S ILL D K+SDFG ++ V + ++APE L
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPY----WMAPEVISRLPYG 219
Query: 490 PKGDVYSFGTVLLELVTGERP 510
+ D++S G +++E++ GE P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
+ H + RI+HR+I + IL+D + KI DFG+A+ ++ +T L T N G + Y +
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS--ETSL-TQTNHVLGTVQYFS 180
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539
PE A+ D+YS G VL E++ GE P F G IA +QD
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP---------FNGETAVSIA----IKHIQD 227
Query: 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584
++ V V ++ Q L N +L K++ ++ Q ++
Sbjct: 228 SVPN--VTTDVRKDIPQSL---SNVILRATEKDKANRYKTIQEMK 267
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRN 361
+ K +G G G +YKA G + +KR++ E + E++ L + + N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAI-GAARGFAWL 420
+V L+ +++ LV++ M L D K+ ++KI + RG A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + RI+HR++ + +L++ D K++DFGLAR P+ ++ V L Y A
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVT-----LWYRA 187
Query: 480 PEYARTLVATPKG----DVYSFGTVLLELVTGE 508
P+ L+ + K D++S G + E++TG+
Sbjct: 188 PD---VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRN 361
+ K +G G G +YKA G + +KR++ E + E++ L + + N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAI-GAARGFAWL 420
+V L+ +++ LV++ M L D K+ ++KI + RG A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + RI+HR++ + +L++ D K++DFGLAR P+ ++ V L Y A
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVT-----LWYRA 187
Query: 480 PEYARTLVATPKG----DVYSFGTVLLELVTGE 508
P+ L+ + K D++S G + E++TG+
Sbjct: 188 PD---VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ L ++ + ++V G C + E+ LV +++P GSL D L P G + + L
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLA----QLL 115
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
A G A+LH IHR ++++ +LLD+D KI DFGLA+ + +
Sbjct: 116 LFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 172
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+G+ + + APE + DV+SFG L EL+T
Sbjct: 173 EDGD-SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ L ++ + ++V G C + E+ LV +++P GSL D L P G + + L
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLA----QLL 114
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
A G A+LH IHR ++++ +LLD+D KI DFGLA+ + +
Sbjct: 115 LFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 171
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+G+ + + APE + DV+SFG L EL+T
Sbjct: 172 EDGD-SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 307 FSKNNIIGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
F+K + IG G G +YK + ++ ++ + L++++ ++ E+ L + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
G + + ++ +++ GS DLL P + I +G +LH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLH-- 133
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ R IHR+I + +LL + + K++DFG+A + + FV F ++APE
Sbjct: 134 -SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF----WMAPEVI 188
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERPTN 512
+ K D++S G +EL GE P +
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNS 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 312 IIGSGRTGTMYKAL-LEDGTSLMVKRL-QDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
++G G G +Y L + + +K + + R + E+A +K++N+V LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLH----PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN 425
+ + +P GSL LL P D +++ + + + G +LH N
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN-- 127
Query: 426 PRIIHRNISSKCILLDD-DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
+I+HR+I +L++ KISDFG ++ + I+ TF G L Y+APE
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT----GTLQYMAPE--- 179
Query: 485 TLVATPKG-----DVYSFGTVLLELVTGERP 510
+ P+G D++S G ++E+ TG+ P
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 64/177 (36%), Gaps = 47/177 (26%)
Query: 91 GLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLA 150
L G P I + ++ G+ N++ G +PD TS+ +S N +G IP A
Sbjct: 136 ALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195
Query: 151 NCTY----------------------------------------------LNSLKLDHNR 164
N LN L L +NR
Sbjct: 196 NLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNR 255
Query: 165 FSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLT-LSADSVTNNQGLCGEPLDAC 220
G +P L QL L S +V+ N L G IP NL + NN+ LCG PL AC
Sbjct: 256 IYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 33 EDLACLKSIKDSLEDPFNYLNSSWNFNNDTEGFICKFT--GVECWHPDEN-RVLNLRLTD 89
+D L IK L +P SSW D C T GV C + RV NL L+
Sbjct: 6 QDKQALLQIKKDLGNPTTL--SSWLPTTDC----CNRTWLGVLCDTDTQTYRVNNLDLSG 59
Query: 90 MGLKGQFP--RGIRNCSSMTGLDLSS-NKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIP 146
+ L +P + N + L + N L GP+P I+KL L L ++ N SG+IP
Sbjct: 60 LNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQ-LHYLYITHTNVSGAIP 118
Query: 147 SNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP--------TFVN 198
L+ L +L +N SG +PP + L L + N +SG+IP F +
Sbjct: 119 DFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178
Query: 199 LTLSADSVT 207
+T+S + +T
Sbjct: 179 MTISRNRLT 187
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
GS R G + ++ V + + +E + E + + N +V L+G C A+
Sbjct: 23 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE 82
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWP--RRLKIAIGAARGFAWLHHNCNPRIIH 430
+LV + G L+ L GK + P ++ + G +L +H
Sbjct: 83 A-LMLVMEMAGGGPLHKFL-----VGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVH 133
Query: 431 RNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP 490
R+++++ +LL + KISDFGL++ + D++ + G++ L + APE +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW-PLKWYAPECINFRKFSS 192
Query: 491 KGDVYSFGTVLLE-LVTGERPTNVAKAPETF 520
+ DV+S+G + E L G++P K PE
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 223
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQDSQRSEKEFVA---EMATLGSVKNRNLVPL 365
IG G G KA+L EDG ++K + S+ S KE E+A L ++K+ N+V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPAD----DTGKSVDWPRRLKIAIGAARGFAWLH 421
+V + G L+ ++ + +DW ++ +A L
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA---------LK 139
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
H + +I+HR+I S+ I L D ++ DFG+AR++N G Y++PE
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST----VELARACIGTPYYLSPE 195
Query: 482 YARTLVATPKGDVYSFGTVLLELVT 506
K D+++ G VL EL T
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCT 220
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 29/230 (12%)
Query: 304 TNSFSKNNII-----GSGRTGTMYKALL------EDGTSLMVKRLQD-SQRSEKEFVAEM 351
++NI+ G G G ++ A +D + VK L+D S + K+F E
Sbjct: 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREA 66
Query: 352 ATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWP----- 404
L ++++ ++V G C+ ++V+++M +G L L H D + P
Sbjct: 67 ELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 405 --RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462
+ L IA A G +L + +HR+++++ L+ ++ KI DFG++R + D
Sbjct: 127 QSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
Query: 463 HLSTFVNGE-FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ V G + ++ PE T + DV+S G VL E+ T G++P
Sbjct: 184 YR---VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 307 FSKNNIIGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
F+K IG G G ++K + + ++ + L++++ ++ E+ L + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLH--PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
G + + ++ +++ GS DLL P D+ + LK G +LH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK-------GLDYLH 137
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ + IHR+I + +LL + + K++DFG+A + +TFV F ++APE
Sbjct: 138 ---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF----WMAPE 190
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTN 512
+ K D++S G +EL GE P +
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNS 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 310 NNIIGSGRTGTMYKALLEDGTSLMVK-------RLQDSQRSEKEFVAEMATLGSVKNRNL 362
+ +IG G G +Y D ++ R+ + Q+ E F+ E + + + N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA-FLREGLLMRGLNHPNV 84
Query: 363 VPLLGFCMAKKERL--LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
+ L+G M E L ++ +M +G L + D + + ARG +L
Sbjct: 85 LALIGI-MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL 140
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYV 478
+ +HR+++++ +LD+ F K++DFGLAR + +D + L +
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRHARLPVKWT 195
Query: 479 APEYARTLVATPKGDVYSFGTVLLELVTGERP 510
A E +T T K DV+SFG +L EL+T P
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 33/226 (14%)
Query: 307 FSKNNI-----IGSGRTGTMYKALL-----EDGT-SLMVKRLQDSQRS-EKE-FVAEMAT 353
F +NN+ +G+G G + +A ED + VK L+ + + EKE ++E+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 354 LGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---------PADDTGKSVDW 403
+ + ++ N+V LLG C L++ ++ G L + L PA S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 404 PRRL-KIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPI 460
R L + A+G A+L NC IHR+++++ +LL + KI DFGLAR +MN
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN-- 216
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
D++ N + ++APE V T + DV+S+G +L E+ +
Sbjct: 217 DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++H+ + L + + TG + P +G A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 120
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 172
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 173 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 313 IGSGRTGTMYKALL------EDGTSLMVKRLQDSQRS--EKEFVAEMATLGSVKNRNLVP 364
+G R G +YK L E ++ +K L+D +EF E +++ N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLL---HPADDTGKSVDWPRRLKIAIG-------AA 414
LLG + +++ + +G L++ L P D G S D R +K A+ A
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG-STDDDRTVKSALEPPDFVHLVA 152
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
+ A + + + ++H++++++ +L+ D KISD GL R + D + +
Sbjct: 153 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY--KLLGNSLLP 210
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+ ++APE + D++S+G VL E+ +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 35/228 (15%)
Query: 307 FSKNNI-----IGSGRTGTMYKALL-----EDGT-SLMVKRLQDSQRS-EKE-FVAEMAT 353
F +NN+ +G+G G + +A ED + VK L+ + + EKE ++E+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 354 LGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL------------HPADDTGKS 400
+ + ++ N+V LLG C L++ ++ G L + L +P+ + +
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 401 VDWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMN 458
+ L + A+G A+L NC IHR+++++ +LL + KI DFGLAR +MN
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
D++ N + ++APE V T + DV+S+G +L E+ +
Sbjct: 219 --DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 313 IGSGRTGTMYKALL------EDGTSLMVKRLQDSQRS--EKEFVAEMATLGSVKNRNLVP 364
+G R G +YK L E ++ +K L+D +EF E +++ N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLL---HPADDTGKSVDWPRRLKIAIG-------AA 414
LLG + +++ + +G L++ L P D G S D R +K A+ A
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG-STDDDRTVKSALEPPDFVHLVA 135
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
+ A + + + ++H++++++ +L+ D KISD GL R + D + +
Sbjct: 136 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY--KLLGNSLLP 193
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+ ++APE + D++S+G VL E+ +
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 302 KATNSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRL---QDSQRSEKEFVAEMATLGSV 357
++ + ++G G G + K +D G + +K+ D + +K + E+ L +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL-LHPADDTGKSVDWPRRLKIAIGAARG 416
++ NLV LL C KK LV++ + + L DL L P +D+ K G
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-----NGLDYQVVQKYLFQIING 136
Query: 417 FAWLH-HNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPIDTHLSTFVNGEFGD 474
+ H HN IIHR+I + IL+ K+ DFG AR L P + + + E
Sbjct: 137 IGFCHSHN----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY-----DDEVAT 187
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGE 508
Y APE V K DV++ G ++ E+ GE
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKA---LLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
++ K + +G G T+YK L ++ +L RL+ + + + E++ L +K+ N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+V L +K LV++++ DL DD G ++ RG A+ H
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDK----DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVAP 480
+++HR++ + +L+++ E K++DFGLAR + P T+ + E L Y P
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY-----DNEVVTLWYRPP 169
Query: 481 E--YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ T +T + D++ G + E+ TG RP
Sbjct: 170 DILLGSTDYST-QIDMWGVGCIFYEMATG-RP 199
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 33/226 (14%)
Query: 307 FSKNNI-----IGSGRTGTMYKALL-----EDGT-SLMVKRLQDSQRS-EKE-FVAEMAT 353
F +NN+ +G+G G + +A ED + VK L+ + + EKE ++E+
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 354 LGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH---------PADDTGKSVDW 403
+ + ++ N+V LLG C L++ ++ G L + L PA S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 404 PRRL-KIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPI 460
R L + A+G A+L NC IHR+++++ +LL + KI DFGLAR +MN
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMN-- 216
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
D++ N + ++APE V T + DV+S+G +L E+ +
Sbjct: 217 DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNR 360
+ K IG G G ++K D G + +K+ +S+ +K + E+ L +K+
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
NLV LL K+ LV+++ + L++L D + V I + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHEL----DRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 421 H-HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
H HNC IHR++ + IL+ K+ DFG ARL+ T S + + E Y +
Sbjct: 119 HKHNC----IHRDVKPENILITKHSVIKLCDFGFARLL----TGPSDYYDDEVATRWYRS 170
Query: 480 PEYARTLVAT----PKGDVYSFGTVLLELVTG 507
PE LV P DV++ G V EL++G
Sbjct: 171 PE---LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++H+ + L + + TG + P +G A+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 42/235 (17%)
Query: 307 FSKNNI-----IGSGRTGTMYKALL-----EDGT-SLMVKRLQDSQRS-EKE-FVAEMAT 353
F +NN+ +G+G G + +A ED + VK L+ + + EKE ++E+
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 354 LGSV-KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH------------PADDT--- 397
+ + ++ N+V LLG C L++ ++ G L + L P D
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 398 ----GKSVDWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
G+ ++ L + A+G A+L NC IHR+++++ +LL + KI DFG
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFG 203
Query: 453 LAR-LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
LAR +MN D++ N + ++APE V T + DV+S+G +L E+ +
Sbjct: 204 LARDIMN--DSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 99
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 100 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVL 501
KI DFGL R + D H +V E + + APE +T + D + FG L
Sbjct: 152 DLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
Query: 502 LELVT-GERP 510
E+ T G+ P
Sbjct: 209 WEMFTYGQEP 218
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L D + + TG + P +G A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTG--IPLPLIKSYLFQLLQGLA 117
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 27/211 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G +++ G + VK S R E+ + E +V R+ +LGF A
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRH-ENILGFIAAD 105
Query: 373 K-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ LV + +GSL+D L+ T + + +K+A+ A G A LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 160
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + + N G Y+AP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 481 EY------ARTLVATPKGDVYSFGTVLLELV 505
E + + + D+Y+ G V E+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 99
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 100 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVL 501
KI DFGL R + D H +V E + + APE +T + D + FG L
Sbjct: 152 DLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
Query: 502 LELVT-GERP 510
E+ T G+ P
Sbjct: 209 WEMFTYGQEP 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGS 356
+ + +F K IG G G +YKA + G + +K+++ +E + E++ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 357 VKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
+ + N+V LL + + LV++ + + L D + + TG + P +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG--IPLPLIKSYLFQLLQG 118
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDL 475
A+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 170
Query: 476 GYVAPE------YARTLVATPKGDVYSFGTVLLELVT 506
Y APE Y T V D++S G + E+VT
Sbjct: 171 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G +++ G + VK S R E+ + E +V R+ +LGF A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRH-ENILGFIAAD 67
Query: 373 K-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ LV + +GSL+D L+ T + + +K+A+ A G A LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 122
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + + N G Y+AP
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 481 EY------ARTLVATPKGDVYSFGTVLLEL 504
E + + + D+Y+ G V E+
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G +++ G + VK S R E+ + E +V R+ +LGF A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRH-ENILGFIAAD 92
Query: 373 K-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ LV + +GSL+D L+ T + + +K+A+ A G A LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 147
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + + N G Y+AP
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 481 EY------ARTLVATPKGDVYSFGTVLLEL 504
E + + + D+Y+ G V E+
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
E++ L +++ +++ L +K E ++V ++ N L+D + D S RR
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM--SEQEARRFFQ 120
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
I +A + H +I+HR++ + +LLD+ KI+DFGL+ +M F+
Sbjct: 121 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 170
Query: 470 GEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
G Y APE + L A P+ DV+S G +L ++ P + P FK
Sbjct: 171 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 223
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 95
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 96 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVL 501
KI DFGL R + D H +V E + + APE +T + D + FG L
Sbjct: 148 DLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 502 LELVT-GERP 510
E+ T G+ P
Sbjct: 205 WEMFTYGQEP 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
E++ L +++ +++ L +K E ++V ++ N L+D + D S RR
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM--SEQEARRFFQ 119
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
I +A + H +I+HR++ + +LLD+ KI+DFGL+ +M F+
Sbjct: 120 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 169
Query: 470 GEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
G Y APE + L A P+ DV+S G +L ++ P + P FK
Sbjct: 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G +++ G + VK S R E+ + E +V R+ +LGF A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRH-ENILGFIAAD 66
Query: 373 K-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ LV + +GSL+D L+ T + + +K+A+ A G A LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 121
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + + N G Y+AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 481 EY------ARTLVATPKGDVYSFGTVLLEL 504
E + + + D+Y+ G V E+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 27/217 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGS 356
+ + +F K IG G G +YKA + G + +K+++ +E + E++ L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 357 VKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
+ + N+V LL + + LV++ + + L D + + TG + P +G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG--IPLPLIKSYLFQLLQG 117
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDL 475
A+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 169
Query: 476 GYVAPE------YARTLVATPKGDVYSFGTVLLELVT 506
Y APE Y T V D++S G + E+VT
Sbjct: 170 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G +++ G + VK S R E+ + E +V R+ +LGF A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRH-ENILGFIAAD 72
Query: 373 K-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ LV + +GSL+D L+ T + + +K+A+ A G A LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 127
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + + N G Y+AP
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 481 EY------ARTLVATPKGDVYSFGTVLLEL 504
E + + + D+Y+ G V E+
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 105
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 106 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVL 501
KI DFGL R + D H +V E + + APE +T + D + FG L
Sbjct: 158 DLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
Query: 502 LELVT-GERP 510
E+ T G+ P
Sbjct: 215 WEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 95
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 96 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYARTLVATPKGDVYSFGTVL 501
KI DFGL R + D H +V E + + APE +T + D + FG L
Sbjct: 148 DLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 502 LELVT-GERP 510
E+ T G+ P
Sbjct: 205 WEMFTYGQEP 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G +++ G + VK S R E+ + E +V R+ +LGF A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF--SSREERSWFREAEIYQTVMLRH-ENILGFIAAD 69
Query: 373 K-------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ LV + +GSL+D L+ T + + +K+A+ A G A LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIV 124
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + + N G Y+AP
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 481 EY------ARTLVATPKGDVYSFGTVLLEL 504
E + + + D+Y+ G V E+
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G +Y L D R A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITELANAL 126
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 177
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
E++ L +++ +++ L +K E ++V ++ N L+D + D S RR
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM--SEQEARRFFQ 110
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
I +A + H +I+HR++ + +LLD+ KI+DFGL+ +M F+
Sbjct: 111 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 160
Query: 470 GEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
G Y APE + L A P+ DV+S G +L ++ P + P FK
Sbjct: 161 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 14/173 (8%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
E++ L +++ +++ L +K E ++V ++ N L+D + D S RR
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKM--SEQEARRFFQ 114
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
I +A + H +I+HR++ + +LLD+ KI+DFGL+ +M F+
Sbjct: 115 QIISAVEYCHRH-----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-----GNFLK 164
Query: 470 GEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
G Y APE + L A P+ DV+S G +L ++ P + P FK
Sbjct: 165 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK 217
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + E G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLD 171
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
+G G G++YKA+ ++ ++ + + +E + E++ + + ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ +V ++ GS+ D++ + T + L+ + +G +LH R IHR+
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL---KGLEYLHFM---RKIHRD 150
Query: 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKG 492
I + ILL+ + K++DFG+A + T N G ++APE + +
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQL----TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 493 DVYSFGTVLLELVTGERP 510
D++S G +E+ G+ P
Sbjct: 207 DIWSLGITAIEMAEGKPP 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWPRRL 407
E+ L ++ +++ L + +V +++ G L+D + H + ++ RRL
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----RRL 116
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
I +A + H ++HR++ + +LLD KI+DFGL+ +M+ F
Sbjct: 117 FQQILSAVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-----GEF 166
Query: 468 VNGEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ G Y APE + L A P+ D++S G +L L+ G P + P FK
Sbjct: 167 LRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWPRRL 407
E+ L ++ +++ L + +V +++ G L+D + H + ++ RRL
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----RRL 116
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
I +A + H ++HR++ + +LLD KI+DFGL+ +M+ F
Sbjct: 117 FQQILSAVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-----GEF 166
Query: 468 VNGEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ G Y APE + L A P+ D++S G +L L+ G P + P FK
Sbjct: 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 40/277 (14%)
Query: 327 EDGTSLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
+D + VK L+D + + K+F E L ++++ ++V G C ++V+++M +G
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 386 SLYDLL--HPADDTGKSVDWPRR----------LKIAIGAARGFAWLHHNCNPRIIHRNI 433
L L H D PR+ L IA A G +L + +HR++
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDL 159
Query: 434 SSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-FGDLGYVAPEYARTLVATPKG 492
+++ L+ + KI DFG++R + D + V G + ++ PE T +
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYR---VGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 493 DVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVD 551
DV+SFG +L E+ T G++P W QLS+T ++ + I + V +
Sbjct: 217 DVWSFGVILWEIFTYGKQP----------------WF-QLSNT-EVIECITQGRVLERPR 258
Query: 552 NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588
+ V C P++R + E+Y+ L A+G+
Sbjct: 259 VCPKEVYDVMLGC-WQREPQQRLNIKEIYKILHALGK 294
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 47 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 105
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 106 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLE 503
KI DFGL R + D H + + + APE +T + D + FG L E
Sbjct: 158 DLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWE 216
Query: 504 LVT-GERP 510
+ T G+ P
Sbjct: 217 MFTYGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 330 TSLMVKRLQDSQRSEKE----FVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
S+ VK L+ S+ E F+ E+ + S+ +RNL+ L G + ++ V + P G
Sbjct: 37 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLG 95
Query: 386 SLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443
SL D L H ++ + A+ A G +L + R IHR+++++ +LL
Sbjct: 96 SLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLE 503
KI DFGL R + D H + + + APE +T + D + FG L E
Sbjct: 148 DLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
Query: 504 LVT-GERP 510
+ T G+ P
Sbjct: 207 MFTYGQEP 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSK 436
+V +++ +L D++H T + R +++ A + + H N IIHR++
Sbjct: 93 IVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYS 496
I++ K+ DFG+AR + + T G Y++PE AR + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 497 FGTVLLELVTGERP 510
G VL E++TGE P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSK 436
+V +++ +L D++H T + R +++ A + + H N IIHR++
Sbjct: 93 IVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYS 496
I++ K+ DFG+AR + + T G Y++PE AR + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 497 FGTVLLELVTGERP 510
G VL E++TGE P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSK 436
+V +++ +L D++H T + R +++ A + + H N IIHR++
Sbjct: 93 IVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYS 496
I++ K+ DFG+AR + + T G Y++PE AR + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 497 FGTVLLELVTGERP 510
G VL E++TGE P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSK 436
+V +++ +L D++H T + R +++ A + + H N IIHR++
Sbjct: 93 IVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYS 496
I++ K+ DFG+AR + + T G Y++PE AR + DVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 497 FGTVLLELVTGERP 510
G VL E++TGE P
Sbjct: 205 LGCVLYEVLTGEPP 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 172
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 124
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 175
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSK 436
+V +++ +L D++H T + R +++ A + + H N IIHR++
Sbjct: 93 IVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-FGDLGYVAPEYARTLVATPKGDVY 495
IL+ K+ DFG+AR + D+ S G Y++PE AR + DVY
Sbjct: 146 NILISATNAVKVVDFGIARAI--ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 496 SFGTVLLELVTGERP 510
S G VL E++TGE P
Sbjct: 204 SLGCVLYEVLTGEPP 218
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 138
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 139 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 189
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 233
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 73 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 124
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 183
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 126
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 177
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSK 436
+V +++ +L D++H T + R +++ A + + H N IIHR++
Sbjct: 110 IVMEYVDGVTLRDIVH----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 437 CILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYS 496
I++ K+ DFG+AR + + T G Y++PE AR + DVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 497 FGTVLLELVTGERP 510
G VL E++TGE P
Sbjct: 222 LGCVLYEVLTGEPP 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 189
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 75 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 126
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 185
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 93 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 144
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 203
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 146
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 205
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 146
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 205
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 85 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 136
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 195
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 125
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 176
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 220
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 124
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 175
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 147
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 198
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G +Y L D R A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITELANAL 126
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + + P S+ G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRXXLXGTLDY 177
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 120
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 121 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 171
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 215
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGS 356
+ + +F K IG G G +YKA + G + +K+++ +E + E++ L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 357 VKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
+ + N+V LL + + LV++ + + L + + TG + P +G
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQG 119
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDL 475
A+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 171
Query: 476 GYVAPE------YARTLVATPKGDVYSFGTVLLELVT 506
Y APE Y T V D++S G + E+VT
Sbjct: 172 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 119
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 171
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 172 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGS 356
+ + +F K IG G G +YKA + G + +K+++ +E + E++ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 357 VKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
+ + N+V LL + + LV++ + + L + + TG + P +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQG 118
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDL 475
A+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 170
Query: 476 GYVAPE------YARTLVATPKGDVYSFGTVLLELVT 506
Y APE Y T V D++S G + E+VT
Sbjct: 171 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLED-----GTSLMVKRLQDSQRSEKEFVAEMATLGSV 357
A F +G G+ G +Y A + ++ K + E + E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 118
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 119 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 169
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 119
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 171
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 172 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 120
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 172
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 173 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 117
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 126
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + +T G L Y
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLC----GTLDY 177
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE K D++S G + E + G+ P ET+K
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 122
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + ++ + T G L Y
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLC----GTLDY 173
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 117
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K L+ ++ G ++D L
Sbjct: 44 IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL- 102
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H RI+HR++ ++ +LLD D KI+DFG
Sbjct: 103 VAHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFG 156
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ + L TF G Y APE + P+ DV+S G +L LV+G P
Sbjct: 157 FSNEFT-VGGKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 118
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 170
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 118
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWY 170
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWYRA 170
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 437 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 488
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 547
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 171
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 117
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 126
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 178
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 179 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 117
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 169
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 170 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 119
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 171
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 172 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWYRA 172
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 173 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 126
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + + G L
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 176
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKE---FVAEMATLGSVKNRNLVPLLGF 368
IG+G G K + DG L+ K L +E E V+E+ L +K+ N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 369 CMAKKERLL--VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN- 425
+ + L V ++ G L ++ + +D L++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 426 -PRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
++HR++ + LD K+ DFGLAR++N H ++F G Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDTSFAKAFVGTPYYMSPEQMN 189
Query: 485 TLVATPKGDVYSFGTVLLEL 504
+ K D++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ L ++ + N+V G C L+ + +P+GSL + L P + ++ ++L
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKN--KINLKQQL 129
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
K A+ +G +L + +HR+++++ +L++ + + KI DFGL + + D T
Sbjct: 130 KYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE-TDKEXXTV 185
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+ + + APE DV+SFG L EL+T
Sbjct: 186 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 290 KSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFV 348
+S+ ++ LS L F ++G+G G +YK ++ G +K + + E+E
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK 68
Query: 349 AEMATLGSV-KNRNLVPLLGFCMAKK------ERLLVYKHMPNGSLYDLLHPADDTGKSV 401
E+ L +RN+ G + K + LV + GS+ DL+
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 402 DWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461
+W + I RG + LH + ++IHR+I + +LL ++ E K+ DFG++ ++
Sbjct: 129 EWIAYICREI--LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 462 THLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERP 510
+TF+ + ++APE K D++S G +E+ G P
Sbjct: 184 GRRNTFIGTPY----WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 118
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 170
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 327 EDGTSLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
+D + VK L++ S+ + ++F E L ++++++V G C + L+V+++M +G
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 386 SL----------YDLLHPADDTGKS-VDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434
L LL +D + + L +A A G +L +HR+++
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 185
Query: 435 SKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-FGDLGYVAPEYARTLVATPKGD 493
++ L+ KI DFG++R + D + V G + ++ PE T + D
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTMLPIRWMPPESILYRKFTTESD 242
Query: 494 VYSFGTVLLELVT-GERP 510
V+SFG VL E+ T G++P
Sbjct: 243 VWSFGVVLWEIFTYGKQP 260
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTG--IPLPLIKSYLFQLLQGLA 120
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 172
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 173 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
E+ L ++ + N+V G C L+ + +P+GSL + L P + ++ ++L
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKN--KINLKQQL 117
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
K A+ +G +L + +HR+++++ +L++ + + KI DFGL + + D T
Sbjct: 118 KYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE-TDKEXXTV 173
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
+ + + APE DV+SFG L EL+T
Sbjct: 174 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 438 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 489
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + + +G++ + + APE
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYY 548
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 171
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 124
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + G L
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 174
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 122
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + + G L
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLD 172
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 124
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + + P S+ + G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRDDLCGTLDY 175
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 147
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + + G L
Sbjct: 148 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLD 197
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 242
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWYRA 170
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 313 IGSGRTGTMYKA----LL--EDGTSLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPL 365
+G G G ++ A LL +D + VK L++ S+ + ++F E L ++++++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 366 LGFCMAKKERLLVYKHMPNGSL----------YDLLHPADDTGKS-VDWPRRLKIAIGAA 414
G C + L+V+++M +G L LL +D + + L +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-FG 473
G +L +HR+++++ L+ KI DFG++R + D + V G
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTML 199
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ ++ PE T + DV+SFG VL E+ T G++P
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 313 IGSGRTGTMYKA----LL--EDGTSLMVKRLQD-SQRSEKEFVAEMATLGSVKNRNLVPL 365
+G G G ++ A LL +D + VK L++ S+ + ++F E L ++++++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 366 LGFCMAKKERLLVYKHMPNGSL----------YDLLHPADDTGKS-VDWPRRLKIAIGAA 414
G C + L+V+++M +G L LL +D + + L +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE-FG 473
G +L +HR+++++ L+ KI DFG++R + D + V G
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTML 193
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
+ ++ PE T + DV+SFG VL E+ T G++P
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 123
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 175
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 176 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 203
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKI 409
E+ L ++ +++ L + +V +++ G L+D + + RRL
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI--CKNGRLDEKESRRLFQ 123
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
I + + H ++HR++ + +LLD KI+DFGL+ +M+ F+
Sbjct: 124 QILSGVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-----GEFLR 173
Query: 470 GEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
G Y APE + L A P+ D++S G +L L+ G P + P FK
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK 226
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 126
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 178
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 179 PEILLGXKYYSTAV-----DIWSLGCIFAEMVT 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 35/244 (14%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN 359
++ + F + ++G G G + KA D +K+++ ++ ++E+ L S+ +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 360 -------------RNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRR 406
RN V + K + ++ NG+LYDL+H + + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN------PI 460
+ + A +++H IIHR++ I +D+ KI DFGLA+ ++ +
Sbjct: 122 FRQILEA---LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 461 DTH----LSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELV----TGERPT 511
D+ S + G YVA E T K D+YS G + E++ TG
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235
Query: 512 NVAK 515
N+ K
Sbjct: 236 NILK 239
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 172 PEILLGXKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 313 IGSGRTGTMYKALLE-DGTSLMVKR--LQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
IG G TG + A + G + VK L+ QR E F E+ + ++ N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ +E ++ + + G+L D++ + + + + A+LH +I
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLHAQG---VI 163
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY-ARTLVA 488
HR+I S ILL D K+SDFG ++ V + ++APE +R+L A
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY----WMAPEVISRSLYA 219
Query: 489 TPKGDVYSFGTVLLELVTGERP 510
T + D++S G +++E+V GE P
Sbjct: 220 T-EVDIWSLGIMVIEMVDGEPP 240
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKE---FVAEMATLGSVKNRNLVPLLGF 368
IG+G G K + DG L+ K L +E E V+E+ L +K+ N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 369 CMAKKERLL--VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN- 425
+ + L V ++ G L ++ + +D L++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 426 -PRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
++HR++ + LD K+ DFGLAR++N + TFV + Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY----YMSPEQMN 189
Query: 485 TLVATPKGDVYSFGTVLLEL 504
+ K D++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKA---LLEDGTSLMVKRLQ-DSQRSEKEFVAEMATLGSVKNR 360
+F K IG G G +YKA L + +L RL +++ + E++ L + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKA---LLEDGTSLMVKRLQ-DSQRSEKEFVAEMATLGSVKNR 360
+F K IG G G +YKA L + +L RL +++ + E++ L + +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G A+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 170
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 16/214 (7%)
Query: 313 IGSGRTGTMYKALLE------DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
+GSG GT+ K + ++K + + E +AE + + N +V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G C A+ +LV + G L L + V +++ + G +L +
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+HR+++++ +LL KISDFGL++ + + +G++ + + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW-PVKWYAPECINYY 189
Query: 487 VATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
+ K DV+SFG ++ E + G++P K E
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 49/281 (17%)
Query: 307 FSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDS--QRSEK--EFVAEMATLGSVKNRN 361
FS IG G G +Y A + + + +K++ S Q +EK + + E+ L +++ N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ G + + LV ++ GS DLL + V+ + GA +G A+LH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA---AVTHGALQGLAYLH 171
Query: 422 -HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
HN +IHR++ + ILL + K+ DFG A +M P N G ++AP
Sbjct: 172 SHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--------ANXFVGTPYWMAP 219
Query: 481 EYARTLVATPKG------DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534
E ++A +G DV+S G +EL + P F N + + ++
Sbjct: 220 E---VILAMDEGQYDGKVDVWSLGITCIELAE--------RKPPLFNMNAMSALYHIAQN 268
Query: 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT 575
+ + G +E F+ +C L IP++RPT
Sbjct: 269 -------ESPALQSGHWSEYFRNFVDSC---LQKIPQDRPT 299
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 122
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA-RLMNPIDTHLSTFVNGEFGDLG 476
++ H + R+IHR+I + +LL E KI+DFG + + T LS G L
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-------GTLD 172
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + R+IHR+I + +LL E KI+DFG + H + G L
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 171
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P ET+K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 123
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + + P S+ G L Y
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRXXLCGTLDY 174
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 311 NIIGSGRTGTMYKALLEDGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+IG GR G +Y ++ ++ +D++ K F E+ ++ N+V +G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
M+ ++ +LY ++ D +D + +IA +G +LH I+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVR---DAKIVLDVNKTRQIAQEIVKGMGYLHAKG---IL 152
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDT-HLSTFVNGEFGDLGYVAPEYARTLVA 488
H+++ SK + D+ + I+DFGL + + + + G L ++APE R L
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 489 ---------TPKGDVYSFGTVLLELVTGERPTNVAKA 516
+ DV++ GT+ EL E P A
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + + P S+ G L Y
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRTXLCGTLDY 172
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGS 356
+ + +F K IG G G +YKA + G + +K+++ +E + E++ L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 357 VKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
+ + N+V LL + + LV++ + + L + + TG + P +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTG--IPLPLIKSYLFQLLQG 118
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDL 475
A+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L
Sbjct: 119 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----L 170
Query: 476 GYVAPE------YARTLVATPKGDVYSFGTVLLELVT 506
Y APE Y T V D++S G + E+VT
Sbjct: 171 WYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMY--KALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR 360
T SF + ++I S G Y K L ++ +V RL+ + + E L V +
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKE----IVVRLKQVEHTNDE----RLMLSIVTHP 66
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
++ + G ++ ++ ++ G L+ LL KS +P + A A L
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR------KSQRFPNPVAKFYAAEVCLA-L 119
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ + II+R++ + ILLD + KI+DFG A+ + + L G Y+AP
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-------GTPDYIAP 172
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
E T D +SFG ++ E++ G P + +T++
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVK 358
+ +F K IG G G +YKA + G + +K+++ +E + E++ L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+V LL + + LV++ + + L + + TG + P +G A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTG--IPLPLIKSYLFQLLQGLA 118
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGY 477
+ H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT-----LWY 170
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVT 506
APE Y T V D++S G + E+VT
Sbjct: 171 RAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 49/281 (17%)
Query: 307 FSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDS--QRSEK--EFVAEMATLGSVKNRN 361
FS IG G G +Y A + + + +K++ S Q +EK + + E+ L +++ N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ G + + LV ++ GS DLL + V+ + GA +G A+LH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA---AVTHGALQGLAYLH 132
Query: 422 -HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
HN +IHR++ + ILL + K+ DFG A +M P N G ++AP
Sbjct: 133 SHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--------ANXFVGTPYWMAP 180
Query: 481 EYARTLVATPKG------DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534
E ++A +G DV+S G +EL + P F N + + ++
Sbjct: 181 E---VILAMDEGQYDGKVDVWSLGITCIELAE--------RKPPLFNMNAMSALYHIAQN 229
Query: 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPT 575
+ + G +E F+ +C L IP++RPT
Sbjct: 230 -------ESPALQSGHWSEYFRNFVDSC---LQKIPQDRPT 260
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
RI++R++ + ILLDD +ISD GLA + + G G +GY+APE +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA-----VHVPEGQTIKGRVGTVGYMAPEVVKNE 360
Query: 487 VATPKGDVYSFGTVLLELVTGERPTNVAK 515
T D ++ G +L E++ G+ P K
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 123
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI++FG + ++ + +T G L Y
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLC----GTLDY 174
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
RI++R++ + ILLDD +ISD GLA + + G G +GY+APE +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA-----VHVPEGQTIKGRVGTVGYMAPEVVKNE 360
Query: 487 VATPKGDVYSFGTVLLELVTGERPTNVAK 515
T D ++ G +L E++ G+ P K
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 329 GTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385
G + VK + +Q S ++ E+ + + + N+V L +K LV ++ G
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445
++D L A K + + + + A + + H I+HR++ ++ +LLD D
Sbjct: 100 EVFDYL-VAHGRMKEKEARAKFRQIVSAVQ---YCHQKY---IVHRDLKAENLLLDGDMN 152
Query: 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLEL 504
KI+DFG + + L TF G Y APE + P+ DV+S G +L L
Sbjct: 153 IKIADFGFSNEFT-VGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
Query: 505 VTGERP 510
V+G P
Sbjct: 208 VSGSLP 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK-----EFVAEMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK + E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 124
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + + P S+ G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRXXLCGTLDY 175
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 18/215 (8%)
Query: 303 ATNSF---SKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVA-EMATLGSV 357
A NSF SK I+G GR G ++K G L K ++ +KE V E++ + +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ NL+ L +K + +LV +++ G L+D + +D +K R
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR-- 201
Query: 418 AWLHHNCNPRIIHRNISSKCILL--DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
H I+H ++ + IL D + KI DFGLAR P + + FG
Sbjct: 202 ----HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-----LKVNFGTP 252
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
++APE + D++S G + L++G P
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI+DFG + + P S+ G L Y
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAP-----SSRRXXLCGTLDY 172
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 18/224 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A + ++ ++ + EK V E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 124
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
++ H + R+IHR+I + +LL E KI++FG + ++ + +T G L Y
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLC----GTLDY 175
Query: 478 VAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ PE + K D++S G + E + G+ P ET+K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 305 NSFSKNNIIGSGRTG-----TMYKALLEDGT-SLMVKRLQDSQR-SEKE-FVAEMATLGS 356
N S +G+G G T Y + D ++ VK L+ S +E+E ++E+ L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 357 VKNR-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT--------------GKSV 401
+ N N+V LLG C L++ ++ G L + L D+ ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 402 DWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
D L + A+G A+L NC IHR+++++ ILL KI DFGLAR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKN- 220
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
D++ N + ++APE V T + DV+S+G L EL + G P
Sbjct: 221 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 520 FKGNLVEWIAQLS---STGQLQDAIDKCLVAKGVDNELFQ 556
F + E LS + ++ D + C A + F+
Sbjct: 280 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNR 360
+F K IG G G +YKA + G + +K+++ +E + E++ L + +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V LL + + LV++ + + L + + TG + P +G ++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLSFC 119
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H + R++HR++ + +L++ + K++DFGLAR P+ T+ V L Y A
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT-----LWYRA 171
Query: 480 PE------YARTLVATPKGDVYSFGTVLLELVT 506
PE Y T V D++S G + E+VT
Sbjct: 172 PEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 305 NSFSKNNIIGSGRTG-----TMYKALLEDGT-SLMVKRLQDSQR-SEKE-FVAEMATLGS 356
N S +G+G G T Y + D ++ VK L+ S +E+E ++E+ L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 357 VKNR-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT--------------GKSV 401
+ N N+V LLG C L++ ++ G L + L D+ ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 402 DWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
D L + A+G A+L NC IHR+++++ ILL KI DFGLAR +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 197
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
D++ N + ++APE V T + DV+S+G L EL + G P
Sbjct: 198 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 520 FKGNLVEWIAQLS---STGQLQDAIDKCLVAKGVDNELFQ 556
F + E LS + ++ D + C A + F+
Sbjct: 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSVKNRN 361
F +G G+ G +Y A ++ ++ + EK V E+ +++ N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
++ L G+ L+ ++ P G++Y L D R A ++ H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----RFDEQRTATYITELANALSYCH 129
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ R+IHR+I + +LL + E KI+DFG + ++ + +T G L Y+ PE
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPE 180
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ K D++S G + E + G P ET++
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 125
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 184 AEPV-DVWSCGIVLTAMLAGELP 205
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K LV ++ G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H I+HR++ ++ +LLD D KI+DFG
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ L TF G Y APE + P+ DV+S G +L LV+G P
Sbjct: 159 FSNEFT-FGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K LV ++ G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H I+HR++ ++ +LLD D KI+DFG
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ L TF G Y APE + P+ DV+S G +L LV+G P
Sbjct: 159 FSNEFT-FGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 305 NSFSKNNIIGSGRTG-----TMYKALLEDGT-SLMVKRLQDSQR-SEKE-FVAEMATLGS 356
N S +G+G G T Y + D ++ VK L+ S +E+E ++E+ L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 357 VKNR-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT--------------GKSV 401
+ N N+V LLG C L++ ++ G L + L D+ ++
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 402 DWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
D L + A+G A+L NC IHR+++++ ILL KI DFGLAR +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 213
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
D++ N + ++APE V T + DV+S+G L EL + G P
Sbjct: 214 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 520 FKGNLVEWIAQLS---STGQLQDAIDKCLVAKGVDNELFQ 556
F + E LS + ++ D + C A + F+
Sbjct: 273 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 312
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K LV ++ G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H I+HR++ ++ +LLD D KI+DFG
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ L TF G Y APE + P+ DV+S G +L LV+G P
Sbjct: 159 FSNEFT-FGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 305 NSFSKNNIIGSGRTG-----TMYKALLEDGT-SLMVKRLQDSQR-SEKE-FVAEMATLGS 356
N S +G+G G T Y + D ++ VK L+ S +E+E ++E+ L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 357 VKNR-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT--------------GKSV 401
+ N N+V LLG C L++ ++ G L + L D+ ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 402 DWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
D L + A+G A+L NC IHR+++++ ILL KI DFGLAR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 220
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
D++ N + ++APE V T + DV+S+G L EL + G P
Sbjct: 221 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 520 FKGNLVEWIAQLS---STGQLQDAIDKCLVAKGVDNELFQ 556
F + E LS + ++ D + C A + F+
Sbjct: 280 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 305 NSFSKNNIIGSGRTG-----TMYKALLEDGT-SLMVKRLQDSQR-SEKE-FVAEMATLGS 356
N S +G+G G T Y + D ++ VK L+ S +E+E ++E+ L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 357 VKNR-NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT--------------GKSV 401
+ N N+V LLG C L++ ++ G L + L D+ ++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 402 DWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
D L + A+G A+L NC IHR+++++ ILL KI DFGLAR +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKN- 215
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519
D++ N + ++APE V T + DV+S+G L EL + G P
Sbjct: 216 DSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 274
Query: 520 FKGNLVEWIAQLS---STGQLQDAIDKCLVAKGVDNELFQ 556
F + E LS + ++ D + C A + F+
Sbjct: 275 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 314
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 127
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 186 AEPV-DVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 313 IGSGRTGTMYKAL---LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
+G G G + A+ E+ ++ + ++ + + E+ + + N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
+ L ++ G L+D + P D G +R + A G +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMA--GVVYLH---GIGIT 126
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY--ARTLV 487
HR+I + +LLD+ KISDFGLA + + +N G L YVAPE R
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A P DV+S G VL ++ GE P
Sbjct: 185 AEPV-DVWSCGIVLTAMLAGELP 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K L+ ++ G ++D L
Sbjct: 47 IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL- 105
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H RI+HR++ ++ +LLD D KI+DFG
Sbjct: 106 VAHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ + L F G Y APE + P+ DV+S G +L LV+G P
Sbjct: 160 FSNEFT-VGGKLDAFC----GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 18/220 (8%)
Query: 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSVKNRN 361
F +G G+ G +Y A ++ ++ + EK V E+ +++ N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
++ L G+ L+ ++ P G++Y L D R A ++ H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----RFDEQRTATYITELANALSYCH 129
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ R+IHR+I + +LL + E KI+DFG + ++ + T G L Y+ PE
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLC----GTLDYLPPE 180
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
+ K D++S G + E + G P ET++
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 12/200 (6%)
Query: 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKE---FVAEMATLGSVKNRNLVPLLGF 368
IG+G G K + DG L+ K L +E E V+E+ L +K+ N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 369 CMAKKERLL--VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN- 425
+ + L V ++ G L ++ + +D L++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 426 -PRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
++HR++ + LD K+ DFGLAR++N H F G Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDEDFAKEFVGTPYYMSPEQMN 189
Query: 485 TLVATPKGDVYSFGTVLLEL 504
+ K D++S G +L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 316 GRTGTMYKALLE---DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR-NLVPLLGFCM- 370
G G Y L+E DG +KR+ ++ ++E A + + N N++ L+ +C+
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 371 ---AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427
AK E L+ G+L++ + D G + + L + +G RG +H
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKG 154
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN--------GEFGDLGYVA 479
HR++ ILL D+ +P + D G MN H+ + + Y A
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 480 PE---YARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514
PE V + DV+S G VL ++ GE P ++
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K LV ++ G ++D L
Sbjct: 39 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 97
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR-IIHRNISSKCILLDDDFEPKISDF 451
+ W + K A R C+ + I+HR++ ++ +LLD D KI+DF
Sbjct: 98 ------VAHGWMKE-KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 150
Query: 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
G + L TF G Y APE + P+ DV+S G +L LV+G P
Sbjct: 151 GFSNEFT-FGNKLDTFC----GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE--KEFVAEMATLGSVKNRNLVPLLGFC 369
IG G G ++ L D T + VK +++ + +F+ E L + N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
K+ +V + + G L G + L++ AA G +L C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+++++ L+ + KISDFG++R D + + + APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 490 PKGDVYSFGTVLLE 503
+ DV+SFG +L E
Sbjct: 294 SESDVWSFGILLWE 307
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE--KEFVAEMATLGSVKNRNLVPLLGFC 369
IG G G ++ L D T + VK +++ + +F+ E L + N+V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 370 MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRII 429
K+ +V + + G L G + L++ AA G +L C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR+++++ L+ + KISDFG++R D + + + APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 490 PKGDVYSFGTVLLE 503
+ DV+SFG +L E
Sbjct: 294 SESDVWSFGILLWE 307
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPELLTEKS 210
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A+ D+++ G ++ +LV G P
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSVKN 359
+ F +G G+ G +Y A + +M ++ + EKE V E+ +++
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 360 RNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWPRRLKIAIGAARGF 417
N++ + + +K L+ + P G LY L H D +S + L A+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL------ 128
Query: 418 AWLHHNCNPR-IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDL 475
H C+ R +IHR+I + +L+ E KI+DFG + H + G L
Sbjct: 129 ----HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTL 177
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE K D++ G + E + G P + ET +
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 223
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSVKN 359
+ F +G G+ G +Y A + +M ++ + EKE V E+ +++
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 360 RNLVPLLGFCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWPRRLKIAIGAARGF 417
N++ + + +K L+ + P G LY L H D +S + L A+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL------ 127
Query: 418 AWLHHNCNPR-IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDL 475
H C+ R +IHR+I + +L+ E KI+DFG + H + G L
Sbjct: 128 ----HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTL 176
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE K D++ G + E + G P + ET +
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 20/225 (8%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSV 357
A F +G G+ G +Y A ++ ++ ++ + EK V E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
++ N++ L G+ L+ ++ P G++Y L D R A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANAL 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLG 476
++ H + ++IHR+I + +LL E KI+DFG + H + G L
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLD 171
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+ PE + K D++S G + E + G+ P +T+K
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYK 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NAFVGTAQYVSPELLTEKS 208
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 35/244 (14%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-- 357
++ + F + ++G G G + KA D +K+++ ++ ++E+ L S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNH 61
Query: 358 -----------KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRR 406
+ RN V K + ++ N +LYDL+H + + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN------PI 460
+ + A +++H IIHRN+ I +D+ KI DFGLA+ ++ +
Sbjct: 122 FRQILEA---LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 461 DTH----LSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELV----TGERPT 511
D+ S + G YVA E T K D YS G + E + TG
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERV 235
Query: 512 NVAK 515
N+ K
Sbjct: 236 NILK 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NSFVGTAQYVSPELLTEKS 207
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPELLTEKS 211
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 213
Query: 488 ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNL-VEWIAQLSSTGQLQDAIDKCLV 546
A D+++ G ++ +LV G P F+ + +E+ + + +D ++K LV
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLV 273
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSVKNRNLVPLLG 367
+G G+ G +Y A + +M ++ + EKE V E+ +++ N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 368 FCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN 425
+ +K L+ + P G LY L H D +S + L A+ H C+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL----------HYCH 131
Query: 426 PR-IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLGYVAPEYA 483
R +IHR+I + +L+ E KI+DFG + H + G L Y+ PE
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
K D++ G + E + G P + ET +
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 294 KMRLSDLMKATNSFSKNNIIGSGRTGTMYKALL--EDGT--SLMVKRLQD---SQRSEKE 346
K +L D++ F+ ++G G G++ +A L EDG+ + VK L+ + +E
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 347 FVAEMATLGSVKNRNLVPLLGFCMAKKER------LLVYKHMPNGSLYDLLHPADDTGKS 400
F+ E A + + ++ L+G + + + +++ M +G L+ L +
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 401 VDWPRR--LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458
+ P + ++ + A G +L IHR+++++ +L +D ++DFGL+R +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERP 510
D + + + ++A E + T DV++FG + E++T G+ P
Sbjct: 189 SGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 303 ATNSFSKNNIIGSGRTG-TMYKALLEDGTSLMVKRLQDSQRSEKEFV----AEMATLGSV 357
++F ++G G G M + E G VK L+ + + V E L
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+N + L C +RL NG DL+ + + D R A
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGG--DLMFHIQKS-RRFDEARARFYAAEIISAL 137
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR--LMNPIDTHLSTFVNGEFGDL 475
+LH + II+R++ +LLD + K++DFG+ + + N + T +TF G
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFC----GTP 188
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNL 524
Y+APE + ++ P D ++ G +L E++ G P + F+ L
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 35/244 (14%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-- 357
++ + F + ++G G G + KA D +K+++ ++ ++E+ L S+
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 358 -----------KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRR 406
+ RN V + K + ++ N +LYDL+H + + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN------PI 460
+ + A +++H IIHR++ I +D+ KI DFGLA+ ++ +
Sbjct: 122 FRQILEA---LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 461 DTH----LSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELV----TGERPT 511
D+ S + G YVA E T K D+YS G + E++ TG
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235
Query: 512 NVAK 515
N+ K
Sbjct: 236 NILK 239
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K LV ++ G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H I+HR++ ++ +LLD D KI+DFG
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 453 LARLMNPIDTHLSTFVN--GEF-GDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGE 508
+ TF N EF G Y APE + P+ DV+S G +L LV+G
Sbjct: 159 FSNEF--------TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 509 RP 510
P
Sbjct: 211 LP 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 331 SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390
S+++K Q + S E+A S+ N ++V GF +V + SL +L
Sbjct: 78 SMLLKPHQKEKMS-----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 391 LHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450
K+V P +G +LH+N R+IHR++ + L+DD + KI D
Sbjct: 133 ----HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGD 185
Query: 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
FGLA + T G Y+APE + + D++S G +L L+ G+ P
Sbjct: 186 FGLATKIEFDGERKKTLC----GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
Query: 511 TNVAKAPETF 520
+ ET+
Sbjct: 242 FETSCLKETY 251
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 210
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 331 SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390
S+++K Q + S E+A S+ N ++V GF +V + SL +L
Sbjct: 62 SMLLKPHQKEKMS-----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 116
Query: 391 LHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450
K+V P +G +LH+N R+IHR++ + L+DD + KI D
Sbjct: 117 ----HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGD 169
Query: 451 FGLARLMNPIDTHLSTFVNGE-----FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
FGLA + +GE G Y+APE + + D++S G +L L+
Sbjct: 170 FGLATKIE---------FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL 220
Query: 506 TGERPTNVAKAPETF 520
G+ P + ET+
Sbjct: 221 VGKPPFETSCLKETY 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 187
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 186
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 210
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTAQYVSPELLTEKS 208
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---SEKEFVAE----MATLGSV 357
N FS + IIG G G +Y D + + D +R + E +A M +L S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ + + + ++L + NG DL + G + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQHGVFSEADMRFY----AAEII 302
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
L H N +++R++ ILLD+ +ISD GLA + H S G GY
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGY 356
Query: 478 VAPEYARTLVAT-PKGDVYSFGTVLLELVTGERP 510
+APE + VA D +S G +L +L+ G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---SEKEFVAE----MATLGSV 357
N FS + IIG G G +Y D + + D +R + E +A M +L S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ + + + ++L + NG DL + G + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQHGVFSEADMRFY----AAEII 302
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
L H N +++R++ ILLD+ +ISD GLA + H S G GY
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGY 356
Query: 478 VAPEYARTLVAT-PKGDVYSFGTVLLELVTGERP 510
+APE + VA D +S G +L +L+ G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 207
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 185
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 7/163 (4%)
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
+ E L V +R +V L K + LV M G + ++ D+ PR +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
G LH II+R++ + +LLDDD +ISD GLA + T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
G G G++APE D ++ G L E++ P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 188
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 215
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 210
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 208
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTAQYVSPELLTEKS 210
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 192
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA--NXFVGTAQYVSPELLTEKS 208
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 7/163 (4%)
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
+ E L V +R +V L K + LV M G + ++ D+ PR +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
G LH II+R++ + +LLDDD +ISD GLA + T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
G G G++APE D ++ G L E++ P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---SEKEFVAE----MATLGSV 357
N FS + IIG G G +Y D + + D +R + E +A M +L S
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ + + + ++L + NG DL + G + R AA
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQHGVFSEADMRFY----AAEII 301
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
L H N +++R++ ILLD+ +ISD GLA + H S G GY
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGY 355
Query: 478 VAPEYARTLVAT-PKGDVYSFGTVLLELVTGERP 510
+APE + VA D +S G +L +L+ G P
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTAQYVSPELLTEKS 211
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IIHR++ + ILL++D +I+DFG A++++P N G YV+PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANXFVGTAQYVSPELLTEKS 210
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
A D+++ G ++ +LV G P
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 7/163 (4%)
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
+ E L V +R +V L K + LV M G + ++ D+ PR +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
G LH II+R++ + +LLDDD +ISD GLA + T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
G G G++APE D ++ G L E++ P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 7/163 (4%)
Query: 348 VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
+ E L V +R +V L K + LV M G + ++ D+ PR +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
G LH II+R++ + +LLDDD +ISD GLA + T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK---- 345
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
G G G++APE D ++ G L E++ P
Sbjct: 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 88/214 (41%), Gaps = 20/214 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---SEKEFVAE----MATLGSV 357
N FS + IIG G G +Y D + + D +R + E +A M +L S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
+ + + + ++L + NG DL + G + R AA
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGG--DLHYHLSQHGVFSEADMRFY----AAEII 302
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
L H N +++R++ ILLD+ +ISD GLA + H S G GY
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV------GTHGY 356
Query: 478 VAPEYARTLVAT-PKGDVYSFGTVLLELVTGERP 510
+APE + VA D +S G +L +L+ G P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + + N+V L +K LV ++ G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL- 104
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H I+HR++ ++ +LLD D KI+DFG
Sbjct: 105 VAHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ L F G Y APE + P+ DV+S G +L LV+G P
Sbjct: 159 FSNEFT-FGNKLDAFC----GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK--EFVAEMATLGSVKNRNLVPLLGFCM 370
+G G G +YKA ++ +L ++ +++ E+ +++ E+ L + + +V LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 371 AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIH 430
+ ++ + P G++ ++ D + + P+ + +LH + RIIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIH 132
Query: 431 RNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA--RTLVA 488
R++ + +L+ + + +++DFG++ +F+ + ++APE T+
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY----WMAPEVVMCETMKD 188
Query: 489 TP---KGDVYSFGTVLLELVTGERPTN 512
TP K D++S G L+E+ E P +
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 331 SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390
S+++K Q + S E+A S+ N ++V GF +V + SL +L
Sbjct: 78 SMLLKPHQKEKMS-----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 391 LHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450
K+V P +G +LH+N R+IHR++ + L+DD + KI D
Sbjct: 133 ----HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGD 185
Query: 451 FGLARLMNPIDTHLSTFVNGE-----FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
FGLA + +GE G Y+APE + + D++S G +L L+
Sbjct: 186 FGLATKIE---------FDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL 236
Query: 506 TGERPTNVAKAPETF 520
G+ P + ET+
Sbjct: 237 VGKPPFETSCLKETY 251
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 331 SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390
S+++K Q + S E+A S+ N ++V GF +V + SL +L
Sbjct: 78 SMLLKPHQKEKMS-----TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 391 LHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450
K+V P +G +LH+N R+IHR++ + L+DD + KI D
Sbjct: 133 ----HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGD 185
Query: 451 FGLARLMNPIDTHLSTFVNGE-----FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
FGLA + +GE G Y+APE + + D++S G +L L+
Sbjct: 186 FGLATKIE---------FDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL 236
Query: 506 TGERPTNVAKAPETF 520
G+ P + ET+
Sbjct: 237 VGKPPFETSCLKETY 251
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ A T V + + RG ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 190
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + + ++N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK--EFVAEMATLGSVKNRNLVPLLGFCM 370
+G G G +YKA ++ +L ++ +++ E+ +++ E+ L + + +V LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 371 AKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIH 430
+ ++ + P G++ ++ D + + P+ + +LH + RIIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIH 140
Query: 431 RNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA--RTLVA 488
R++ + +L+ + + +++DFG++ +F+ + ++APE T+
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY----WMAPEVVMCETMKD 196
Query: 489 TP---KGDVYSFGTVLLELVTGERPTN 512
TP K D++S G L+E+ E P +
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + + ++N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK--EFVAEMATLGSVKNRNLVPLLGFCM 370
+G G G +YKA ++ + L ++ D++ E+ +++ E+ L S + N+V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 371 AKKERLLVYKHMPNGS----LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
+ ++ + G+ + +L P ++ V + +LH N
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN--- 154
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+IIHR++ + IL D + K++DFG++ +F+ + ++APE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY----WMAPEVVMCE 210
Query: 487 VATP-----KGDVYSFGTVLLELVTGERP 510
+ K DV+S G L+E+ E P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
G +LH N R+IHR++ + L++D E KI DFGLA + T G
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC----GTP 181
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
Y+APE + + DV+S G ++ L+ G+ P + ET+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK--EFVAEMATLGSVKNRNLVPLLGFCM 370
+G G G +YKA ++ + L ++ D++ E+ +++ E+ L S + N+V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 371 AKKERLLVYKHMPNGS----LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
+ ++ + G+ + +L P ++ V + +LH N
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN--- 154
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+IIHR++ + IL D + K++DFG++ +F+ + ++APE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPY----WMAPEVVMCE 210
Query: 487 VATP-----KGDVYSFGTVLLELVTGERP 510
+ K DV+S G L+E+ E P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVK--RLQDSQR----SEKEFVAEMATLG 355
AT+ + IG G GT+YKA G + +K R+ + + S VA + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 356 SVKNRNLVPLLGFCMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIA 410
+ ++ N+V L+ C + + LV++H+ + L L A G + + L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG 470
RG +LH NC I+HR++ + IL+ K++DFGLAR+ + V
Sbjct: 121 F--LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVT- 174
Query: 471 EFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
L Y APE ++ ATP D++S G + E+
Sbjct: 175 ----LWYRAPEVLLQSTYATPV-DMWSVGCIFAEM 204
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
G +LH N R+IHR++ + L++D E KI DFGLA + T G
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC----GTP 181
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
Y+APE + + DV+S G ++ L+ G+ P + ET+
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKA----LLEDGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
G +LH N R+IHR++ + L++D E KI DFGLA + T G
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC----GTP 185
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
Y+APE + + DV+S G ++ L+ G+ P + ET+
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 230
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKA----LLEDGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 209
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 333 MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
++ + Q + S ++ E+ + + N+V L +K LV ++ G ++D L
Sbjct: 46 IIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL- 104
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452
A K + + + + A + + H I+HR++ ++ +LLD D KI+DFG
Sbjct: 105 VAHGRXKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFG 158
Query: 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ L F G Y APE + P+ DV+S G +L LV+G P
Sbjct: 159 FSNEFT-FGNKLDAFC----GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVK--RLQDSQR----SEKEFVAEMATLG 355
AT+ + IG G GT+YKA G + +K R+ + + S VA + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 356 SVKNRNLVPLLGFCMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIA 410
+ ++ N+V L+ C + + LV++H+ + L L A G + + L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG 470
RG +LH NC I+HR++ + IL+ K++DFGLAR+ + L+ V
Sbjct: 121 F--LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVV- 173
Query: 471 EFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
L Y APE ++ ATP D++S G + E+
Sbjct: 174 ---TLWYRAPEVLLQSTYATPV-DMWSVGCIFAEM 204
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDG---TSLMVKRLQDSQR----SEKEFVAEMATLG 355
AT+ + IG G GT+YKA +L R+ + + S VA + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 356 SVKNRNLVPLLGFCMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIA 410
+ ++ N+V L+ C + + LV++H+ + L L A G + + L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG 470
RG +LH NC I+HR++ + IL+ K++DFGLAR+ + ++
Sbjct: 121 F--LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALDP 170
Query: 471 EFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
L Y APE ++ ATP D++S G + E+
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPV-DMWSVGCIFAEM 204
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 226
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
IGSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 199
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 38/276 (13%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQD-----SQRSEKEFVAEMATLGSVKNRNLVPLLG 367
+GSG G ++ L+E+ +S + + ++ SQ ++ AE+ L S+ + N++ +
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 368 FCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427
+V + G L + + A GK++ ++ A+ H +
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQH 144
Query: 428 IIHRNISSKCILLDDD--FEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
++H+++ + IL D P KI DFGLA L D H + G Y+APE +
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHSTNAA----GTALYMAPEVFK 199
Query: 485 TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID-K 543
V T K D++S G V+ L+TG P F G +E + Q ++ + A++ +
Sbjct: 200 RDV-TFKCDIWSAGVVMYFLLTGCLP---------FTGTSLEEVQQKATYKEPNYAVECR 249
Query: 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
L + VD LK +L P+ RP+ +V
Sbjct: 250 PLTPQAVD-----LLK----QMLTKDPERRPSAAQV 276
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKA----LLEDGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 224
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 210
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 46/268 (17%)
Query: 277 LTGTKGIKVSLFEKSITKMRLSDLMK----------ATNSFS------KNNI-----IGS 315
G G ++ E ++K+R S +M T+S S + NI +G
Sbjct: 22 FQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGH 81
Query: 316 GRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLLG 367
G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V +G
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 141
Query: 368 FCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
+ R ++ + M G L L P S+ L +A A G +L N
Sbjct: 142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN- 200
Query: 425 NPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDLGYV 478
IHR+I+++ LL KI DFG+AR D + + + + ++
Sbjct: 201 --HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAMLPVKWM 253
Query: 479 APEYARTLVATPKGDVYSFGTVLLELVT 506
PE + T K D +SFG +L E+ +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKA----LLEDGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 201
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 83/210 (39%), Gaps = 27/210 (12%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372
IG GR G ++ G + VK ++ + E+ +++ N+ LGF A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI---LGFIAAD 100
Query: 373 -------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC- 424
+ L+ + NGSLYD L KS+ LK+A + G LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIF 155
Query: 425 ----NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
P I HR++ SK IL+ + I+D GLA + N G Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 481 EY------ARTLVATPKGDVYSFGTVLLEL 504
E + D+YSFG +L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + + G Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVATRWYRAPEIM 201
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 216
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK--EFVAEMATLGSVKNRNLVPLLGFCM 370
+G G G +YKA ++ + L ++ D++ E+ +++ E+ L S + N+V LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 371 AKKERLLVYKHMPNGS----LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
+ ++ + G+ + +L P ++ V + +LH N
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN--- 154
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
+IIHR++ + IL D + K++DFG++ F+ + ++APE
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPY----WMAPEVVMCE 210
Query: 487 VATP-----KGDVYSFGTVLLELVTGERP 510
+ K DV+S G L+E+ E P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+AR D + +++ +
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAMLPV 236
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 25/228 (10%)
Query: 304 TNSFSKNNIIGSGRTGTMY----KALLEDGTSLMVKRLQDSQRSEKE-FVAEMATLGSVK 358
++ + ++G G G + K ++ ++ + Q Q+++KE + E+ L +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N++ L F K LV + G L+D + + VD R ++ + G
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 146
Query: 419 WLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDTHL--STFVNGEFG 473
++H N +I+HR++ + +LL+ D +I DFGL+ TH S + + G
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 196
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+APE K DV+S G +L L++G P N A + K
Sbjct: 197 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 46/266 (17%)
Query: 279 GTKGIKVSLFEKSITKMRLSDLMK----------ATNSFS------KNNI-----IGSGR 317
G G ++ E ++K+R S +M T+S S + NI +G G
Sbjct: 1 GAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGA 60
Query: 318 TGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLLGFC 369
G +Y+ + D + L V K L + S++ E +F+ E + ++N+V +G
Sbjct: 61 FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS 120
Query: 370 MAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
+ R ++ + M G L L P S+ L +A A G +L N
Sbjct: 121 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN--- 177
Query: 427 RIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDLGYVAP 480
IHR+I+++ LL KI DFG+AR D + + + + ++ P
Sbjct: 178 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAMLPVKWMPP 232
Query: 481 EYARTLVATPKGDVYSFGTVLLELVT 506
E + T K D +SFG +L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
N RIIHR++ ILLD+ I+DF +A ++ P +T ++T G Y+APE
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMA----GTKPYMAPE--- 184
Query: 485 TLVATPKGDVYSF-------GTVLLELVTGERPTNV 513
+ ++ KG YSF G EL+ G RP ++
Sbjct: 185 -MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 25/228 (10%)
Query: 304 TNSFSKNNIIGSGRTGTMY----KALLEDGTSLMVKRLQDSQRSEKE-FVAEMATLGSVK 358
++ + ++G G G + K ++ ++ + Q Q+++KE + E+ L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N++ L F K LV + G L+D + + VD R ++ + G
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 140
Query: 419 WLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDTHL--STFVNGEFG 473
++H N +I+HR++ + +LL+ D +I DFGL+ TH S + + G
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 190
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+APE K DV+S G +L L++G P N A + K
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + + G Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVATRWYRAPEIM 201
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 28/235 (11%)
Query: 288 FEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTM----YKALLEDGTSLMVKRLQDSQRS 343
+EK + K+R L + +IG G G + +KA + ++ + + +RS
Sbjct: 60 YEKIVKKIR--GLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRS 117
Query: 344 EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL--VYKHMPNGSLYDLLHPADDTGKSV 401
+ F E + + N V L FC + ++ L V ++MP G L +L+ D K
Sbjct: 118 DSAFFWEERDIMAFANSPWVVQL-FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWA 176
Query: 402 D-WPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
+ + +A+ A +IHR++ +LLD K++DFG M+
Sbjct: 177 KFYTAEVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 461 D-THLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERP 510
H T V G Y++PE ++ + D +S G L E++ G+ P
Sbjct: 228 GMVHCDTAV----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + + G Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVATRWYRAPEIM 201
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
L H + II+R++ + ILLD++ K++DFGL++ + +F G + Y+A
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC----GTVEYMA 194
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519
PE T D +SFG ++ E++TG P ET
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 154
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 206
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 199
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
L H + II+R++ + ILLD++ K++DFGL++ + +F G + Y+A
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC----GTVEYMA 195
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519
PE T D +SFG ++ E++TG P ET
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 153
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 154 -SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 205
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 25/228 (10%)
Query: 304 TNSFSKNNIIGSGRTGTMY----KALLEDGTSLMVKRLQDSQRSEKE-FVAEMATLGSVK 358
++ + ++G G G + K ++ ++ + Q Q+++KE + E+ L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N++ L F K LV + G L+D + + VD R ++ + G
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 164
Query: 419 WLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDTHL--STFVNGEFG 473
++H N +I+HR++ + +LL+ D +I DFGL+ TH S + + G
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 214
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+APE K DV+S G +L L++G P N A + K
Sbjct: 215 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 25/228 (10%)
Query: 304 TNSFSKNNIIGSGRTGTMY----KALLEDGTSLMVKRLQDSQRSEKE-FVAEMATLGSVK 358
++ + ++G G G + K ++ ++ + Q Q+++KE + E+ L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N++ L F K LV + G L+D + + VD R ++ + G
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 163
Query: 419 WLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDTHL--STFVNGEFG 473
++H N +I+HR++ + +LL+ D +I DFGL+ TH S + + G
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKDKIG 213
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+APE K DV+S G +L L++G P N A + K
Sbjct: 214 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 260
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 199
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 141
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 142 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 193
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 196
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 196
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 153
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 154 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 205
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKA--LLEDGTSLMVKRLQDSQRSEK------E 346
M L +A + IG G G ++KA L G + +KR++ E
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 347 FVAEMATLGSVKNRNLVPLLGFC-MAKKER----LLVYKHMPNGSLYDLLHPADDTGKSV 401
VA + L + ++ N+V L C +++ +R LV++H+ + L L + G
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT 119
Query: 402 DWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461
+ + + + RG +LH + R++HR++ + IL+ + K++DFGLAR+ +
Sbjct: 120 ETIKDMMFQL--LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 462 THLSTFVNGEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
S V L Y APE ++ ATP D++S G + E+
Sbjct: 175 ALTSVVVT-----LWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 -RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ EL+TG
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 196
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 154
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 206
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 154
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 206
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 200
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 161
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 213
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 139
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 191
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 140
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 141 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 192
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 190
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 199
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 201
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 162
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 214
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE---- 471
G +LH N R+IHR++ + L++D E KI DFGLA + +GE
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE---------YDGERKKV 174
Query: 472 -FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
G Y+APE + + DV+S G ++ L+ G+ P + ET+
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 162
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEIM 214
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 152
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 153 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 204
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 190
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 165
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 217
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKA--LLEDGTSLMVKRLQDSQRSEK------E 346
M L +A + IG G G ++KA L G + +KR++ E
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 347 FVAEMATLGSVKNRNLVPLLGFC-MAKKER----LLVYKHMPNGSLYDLLHPADDTGKSV 401
VA + L + ++ N+V L C +++ +R LV++H+ + L L + G
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT 119
Query: 402 DWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461
+ + + + RG +LH + R++HR++ + IL+ + K++DFGLAR+ +
Sbjct: 120 ETIKDMMFQL--LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM 174
Query: 462 THLSTFVNGEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
S V L Y APE ++ ATP D++S G + E+
Sbjct: 175 ALTSVVVT-----LWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE---- 471
G +LH N R+IHR++ + L++D E KI DFGLA + +GE
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE---------YDGERKKV 198
Query: 472 -FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
G Y+APE + + DV+S G ++ L+ G+ P + ET+
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 248
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
L H + II+R++ + ILLD++ K++DFGL++ + +F G + Y+A
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC----GTVEYMA 194
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519
PE T D +SFG ++ E++TG P ET
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 139
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 191
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 196
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 161
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 213
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE---- 471
G +LH N R+IHR++ + L++D E KI DFGLA + +GE
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE---------YDGERKKV 200
Query: 472 -FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
G Y+APE + + DV+S G ++ L+ G+ P + ET+
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 250
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 165
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAPEIM 217
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 200
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKA--LLEDGTSLMVKRLQDSQRSE-------K 345
M L +A + IG G G ++KA L G + +KR++ E +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 346 EFVAEMATLGSVKNRNLVPLLGFC-MAKKER----LLVYKHMPNGSLYDLLHPADDTGKS 400
E VA + L + ++ N+V L C +++ +R LV++H+ + L L + G
Sbjct: 61 E-VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVP 118
Query: 401 VDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460
+ + + + RG +LH + R++HR++ + IL+ + K++DFGLAR+ +
Sbjct: 119 TETIKDMMFQL--LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ 173
Query: 461 DTHLSTFVNGEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
S V L Y APE ++ ATP D++S G + E+
Sbjct: 174 MALTSVVVT-----LWYRAPEVLLQSSYATPV-DLWSVGCIFAEM 212
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 200
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 162
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 214
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 200
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR D ++ FV + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW----YRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLM-VKRLQ---DSQRSEKEFVAEMATLGSVKNR 360
+ K IG G GT++KA + ++ +KR++ D + + E+ L +K++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V L + K+ LV++ DL D +D +G +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H ++HR++ + +L++ + E K++DFGLAR P+ + + E L Y
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY-----SAEVVTLWYRP 169
Query: 480 PE--YARTLVATPKGDVYSFGTVLLELVTGERP 510
P+ + L +T D++S G + EL RP
Sbjct: 170 PDVLFGAKLYST-SIDMWSAGCIFAELANAARP 201
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR D ++ FV + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW----YRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR D ++ FV + Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATRW----YRAPEIM 190
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428
C +RL NG DL++ GK + P+ + A + G +LH I
Sbjct: 88 CFQTVDRLYFVMEYVNGG--DLMYHIQQVGKFKE-PQAVFYAAEISIGLFFLHKRG---I 141
Query: 429 IHRNISSKCILLDDDFEPKISDFGLAR--LMNPIDTHLSTFVNGEF-GDLGYVAPEYART 485
I+R++ ++LD + KI+DFG+ + +M+ + T EF G Y+APE
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR-------EFCGTPDYIAPE---I 191
Query: 486 LVATPKG---DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542
+ P G D +++G +L E++ G+ P + E F+ + ++ S + +I
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSIC 251
Query: 543 KCLVAK 548
K L+ K
Sbjct: 252 KGLMTK 257
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQR---------SEKEFVAEMA 352
AT+ + IG G GT+YKA G + +K ++ S VA +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 353 TLGSVKNRNLVPLLGFCMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL 407
L + ++ N+V L+ C + + LV++H+ + L L A G + + L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
RG +LH NC I+HR++ + IL+ K++DFGLAR+ + L+
Sbjct: 126 MRQF--LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALTPV 179
Query: 468 VNGEFGDLGYVAPEY-ARTLVATPKGDVYSFGTVLLEL 504
V L Y APE ++ ATP D++S G + E+
Sbjct: 180 VV----TLWYRAPEVLLQSTYATPV-DMWSVGCIFAEM 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 91/223 (40%), Gaps = 20/223 (8%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-----EMATLGSVKN 359
+ F +G G+ G +Y A + ++ ++ + EKE V E+ + +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 360 RNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAW 419
N++ L + ++ L+ ++ P G LY L + D R I A +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMY 138
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLGYV 478
H ++IHR+I + +LL E KI+DFG + H + G L Y+
Sbjct: 139 CH---GKKVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKTMCGTLDYL 188
Query: 479 APEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
PE + K D++ G + EL+ G P A ET++
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYR 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 313 IGSGRTGTMYKALLE----DGTSLMV--KRLQD--SQRSEKEFVAEMATLGSVKNRNLVP 364
+G G G +Y+ + D + L V K L + S++ E +F+ E + ++N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLH---PADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+G + R ++ + M G L L P S+ L +A A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 422 HNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNG---EFGDL 475
N IHR+I+++ LL KI DFG+A+ D + +++ +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ-----DIYRASYYRKGGCAMLPV 210
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
++ PE + T K D +SFG +L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 39/226 (17%)
Query: 312 IIGSGRTGTMYKA----LLEDGTSLMV--KRLQD-SQRSEKEFVAE----MATLGSVKNR 360
++GSG G + A + + G S+ V K L++ + SE+E + M LGS +
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS--HE 109
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADD--TGKSVDWP--RRLK-------- 408
N+V LLG C L++++ G L + L + + +++ +RL+
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 409 -------IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPI 460
A A+G +L +HR+++++ +L+ KI DFGLAR +M+
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMS-- 224
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
D++ N + ++APE + T K DV+S+G +L E+ +
Sbjct: 225 DSNYVVRGNARL-PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 368 FC-MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
FC KE L NG DL++ K D R A G +LH +
Sbjct: 85 FCTFQTKENLFFVMEYLNGG--DLMYHIQSCHK-FDLSRATFYAAEIILGLQFLH---SK 138
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLGYVAPEYART 485
I++R++ ILLD D KI+DFG+ + + L EF G Y+APE
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCK-----ENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 486 LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
D +SFG +L E++ G+ P + E F
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI D+GLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 96/255 (37%), Gaps = 30/255 (11%)
Query: 268 PEGNKWAKSLTGTKGIKVSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLE 327
PE NK SL I+ + K + K + A F K N + + L++
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVVLMD 58
Query: 328 DGTSL-MVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFC-MAKKERLLVYKHMPNG 385
D MV++ S E F+ M FC KE L NG
Sbjct: 59 DDVECTMVEKRVLSLAWEHPFLTHM----------------FCTFQTKENLFFVMEYLNG 102
Query: 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445
DL++ K D R A G +LH + I++R++ ILLD D
Sbjct: 103 G--DLMYHIQSCHK-FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGH 156
Query: 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
KI+DFG+ + D + F G Y+APE D +SFG +L E++
Sbjct: 157 IKIADFGMCKENMLGDAKTNXFC----GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
Query: 506 TGERPTNVAKAPETF 520
G+ P + E F
Sbjct: 213 IGQSPFHGQDEEELF 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGL R H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
+LH N RIIHR++ + I+L KI D G A+ ++ + + FV
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFV---- 185
Query: 473 GDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G L Y+APE T D +SFGT+ E +TG RP P + G + E
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
+LH N RIIHR++ + I+L KI D G A+ ++ + + FV
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFV---- 184
Query: 473 GDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G L Y+APE T D +SFGT+ E +TG RP P + G + E
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLL-- 366
+GSG G++ + ++ G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 367 ---GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+ + + + H+ L +++ T V + + RG ++H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 171
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DFGLAR H + G Y APE
Sbjct: 172 -SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIM 223
Query: 484 RTLVA-TPKGDVYSFGTVLLELVTG 507
+ D++S G ++ EL+TG
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 285 VSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTM----YKALLEDGTSLMVKRLQDS 340
+S ++ +I K+R DL + +IG G G + +K+ + ++ + +
Sbjct: 51 LSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 108
Query: 341 QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGK 399
+RS+ F E + + N V L + L +V ++MP G L +L+ D K
Sbjct: 109 KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 168
Query: 400 SVDWPR----RLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455
W R + +A+ A + IHR++ +LLD K++DFG
Sbjct: 169 ---WARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCM 216
Query: 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERP 510
MN + G Y++PE ++ + D +S G L E++ G+ P
Sbjct: 217 KMN---KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR--LMNPI---- 460
+ + ARG +L + IHR+++++ ILL ++ KI DFGLAR NP
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 461 -DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPE 518
DT L L ++APE + + K DV+S+G +L E+ + G P + E
Sbjct: 259 GDTRLP---------LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
Query: 519 TFKGNLVE 526
F L E
Sbjct: 310 DFCSRLRE 317
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 18/141 (12%)
Query: 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435
LV+ M G L+D L + S R + ++ A F LH N I+HR++
Sbjct: 176 FLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSF--LHAN---NIVHRDLKP 228
Query: 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKG-- 492
+ ILLDD+ + ++SDFG + + P + + G GY+APE + ++ T G
Sbjct: 229 ENILLDDNMQIRLSDFGFSCHLEPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYG 283
Query: 493 ---DVYSFGTVLLELVTGERP 510
D+++ G +L L+ G P
Sbjct: 284 KEVDLWACGVILFTLLAGSPP 304
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
+ + A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 467 FVNGEFGD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFK 521
GD L ++APE V T + DV+SFG +L E+ + G P K E F
Sbjct: 204 ------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFX 257
Query: 522 GNLVE 526
L E
Sbjct: 258 RRLKE 262
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 285 VSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTM----YKALLEDGTSLMVKRLQDS 340
+S ++ +I K+R DL + +IG G G + +K+ + ++ + +
Sbjct: 56 LSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 113
Query: 341 QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGK 399
+RS+ F E + + N V L + L +V ++MP G L +L+ D K
Sbjct: 114 KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 173
Query: 400 SVDWPR----RLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455
W R + +A+ A + IHR++ +LLD K++DFG
Sbjct: 174 ---WARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERP 510
MN + G Y++PE ++ + D +S G L E++ G+ P
Sbjct: 222 KMN---KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 30/239 (12%)
Query: 285 VSLFEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTM----YKALLEDGTSLMVKRLQDS 340
+S ++ +I K+R DL + +IG G G + +K+ + ++ + +
Sbjct: 56 LSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI 113
Query: 341 QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGK 399
+RS+ F E + + N V L + L +V ++MP G L +L+ D K
Sbjct: 114 KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK 173
Query: 400 SVDWPR----RLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455
W R + +A+ A + IHR++ +LLD K++DFG
Sbjct: 174 ---WARFYTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCM 221
Query: 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERP 510
MN + G Y++PE ++ + D +S G L E++ G+ P
Sbjct: 222 KMN---KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 312 IIGS-GRTGTMYKALLEDGTSLMVKRLQDSQRSEK--EFVAEMATLGSVKNRNLVPLLGF 368
IIG G G +YKA ++ + L ++ D++ E+ +++ E+ L S + N+V LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 369 CMAKKERLLVYKHMPNGS----LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
+ ++ + G+ + +L P ++ V + +LH N
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN- 127
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGL-ARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+IIHR++ + IL D + K++DFG+ A+ +F+ + ++APE
Sbjct: 128 --KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY----WMAPEVV 181
Query: 484 RTLVATP-----KGDVYSFGTVLLELVTGERP 510
+ K DV+S G L+E+ E P
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428
C +RL NG DL++ G+ + P + A A G +L + I
Sbjct: 89 CFQTMDRLYFVMEYVNGG--DLMYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQ---SKGI 142
Query: 429 IHRNISSKCILLDDDFEPKISDFGLAR--LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
I+R++ ++LD + KI+DFG+ + + + + T G Y+APE +
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC------GTPDYIAPE---II 193
Query: 487 VATPKG---DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543
P G D ++FG +L E++ G+ P E F+ + +A S + AI K
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 253
Query: 544 CLVAK 548
L+ K
Sbjct: 254 GLMTK 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
L H + II+R++ + ILLD++ K++DFGL++ + +F G + Y+A
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC----GTVEYMA 198
Query: 480 PEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519
PE + D +S+G ++ E++TG P ET
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD----LGYVAPEY 482
+ IHR+++++ ILL + KI DFGLAR + ++ GD L ++APE
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPET 212
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 213 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQ---DSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + A G ++ VK+L +Q K E+ L V ++N++ LL
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++H +D R + G LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLH-- 141
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR + + ++ +V + Y APE
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS-TNFMMTPYVVTRY----YRAPEVI 195
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ ELV G
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 259
Query: 473 GD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
GD L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 260 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 252
Query: 473 GD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
GD L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD----LGYVAPEY 482
+ IHR+++++ ILL + KI DFGLAR + ++ GD L ++APE
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPET 212
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 213 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 250
Query: 473 GD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
GD L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 251 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 309
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 304 TNSFSKNNIIGSGRTGTMY----KALLEDGTSLMVKRLQDSQRSEKE-FVAEMATLGSVK 358
++ + ++G G G + K ++ ++ + Q Q+++KE + E+ L +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
+ N+ L F K LV + G L+D + + VD R ++ + G
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQVLS---GIT 140
Query: 419 WLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDTHL--STFVNGEFG 473
+ H N +I+HR++ + +LL+ D +I DFGL+ TH S + G
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKDKIG 190
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521
Y+APE K DV+S G +L L++G P N A + K
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK 237
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 257
Query: 473 GD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
GD L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 258 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 194 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 244
Query: 473 GD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
GD L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD----LGYVAPEY 482
+ IHR+++++ ILL + KI DFGLAR + ++ GD L ++APE
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPET 221
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR + ++
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 203
Query: 473 GD----LGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
GD L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 262
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD----LGYVAPEY 482
+ IHR+++++ ILL + KI DFGLAR + ++ GD L ++APE
Sbjct: 170 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------GDARLPLKWMAPET 223
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 224 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 268
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQ---DSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + A G ++ VK+L +Q K E+ L V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++H +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR + ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC-TNFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ ELV G
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLM-VKRLQ---DSQRSEKEFVAEMATLGSVKNR 360
+ K IG G GT++KA + ++ +KR++ D + + E+ L +K++
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N+V L + K+ LV++ DL D +D +G +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-PIDTHLSTFVNGEFGDLGYVA 479
H ++HR++ + +L++ + E K+++FGLAR P+ + + E L Y
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY-----SAEVVTLWYRP 169
Query: 480 PE--YARTLVATPKGDVYSFGTVLLELVTGERP 510
P+ + L +T D++S G + EL RP
Sbjct: 170 PDVLFGAKLYST-SIDMWSAGCIFAELANAGRP 201
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLK 408
E+A L +K+ N+V L + L+ + + G L+D ++ T + D R +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER--DASRLIF 123
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCIL---LDDDFEPKISDFGLARLMNPIDTHLS 465
+ A + +LH + I+HR++ + +L LD+D + ISDFGL+++ +P
Sbjct: 124 QVLDAVK---YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
+ ++ G GYVAPE + D +S G + L+ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI FGLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILGFGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLK 408
E+A L +K+ N+V L + L+ + + G L+D ++ T + D R +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER--DASRLIF 123
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCIL---LDDDFEPKISDFGLARLMNPIDTHLS 465
+ A + +LH + I+HR++ + +L LD+D + ISDFGL+++ +P
Sbjct: 124 QVLDAVK---YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
+ ++ G GYVAPE + D +S G + L+ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLK 408
E+A L +K+ N+V L + L+ + + G L+D ++ T + D R +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER--DASRLIF 123
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCIL---LDDDFEPKISDFGLARLMNPIDTHLS 465
+ A + +LH + I+HR++ + +L LD+D + ISDFGL+++ +P
Sbjct: 124 QVLDAVK---YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
+ ++ G GYVAPE + D +S G + L+ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI DF LAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFYLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 346 EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL--YDLLHPADDTGKSVDW 403
+F E+ + +KN + G E ++Y++M N S+ +D D +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 404 P-RRLKIAIGAA-RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461
P + +K I + F+++H+ N I HR++ IL+D + K+SDFG + M +D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYM--VD 204
Query: 462 THLSTFVNGEFGDLGYVAPEY--ARTLVATPKGDVYSFGTVLLELVTGERP 510
+ G G ++ PE+ + K D++S G L + P
Sbjct: 205 KK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 185
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 38/226 (16%)
Query: 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVA---------EMAT 353
+ +S + +GSG G ++ A+ E ++VK ++ + E ++ E+A
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 354 LGSVKNRNLVPLL------GFCMAKKERLLVYKHMPNGSLYDLL--HPADDTGKSVDWPR 405
L V++ N++ +L GF +L++ KH L+ + HP D + R
Sbjct: 83 LSRVEHANIIKVLDIFENQGFF-----QLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 406 RLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465
+L A+G R IIHR+I + I++ +DF K+ DFG A +
Sbjct: 138 QLVSAVGYLR---------LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER-GKLFY 187
Query: 466 TFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERP 510
TF G + Y APE P+ +++S G L LV E P
Sbjct: 188 TFC----GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLK 408
E+A L +K+ N+V L + L+ + + G L+D ++ T + D R +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER--DASRLIF 123
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCIL---LDDDFEPKISDFGLARLMNPIDTHLS 465
+ A + +LH + I+HR++ + +L LD+D + ISDFGL+++ +P
Sbjct: 124 QVLDAVK---YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-----G 172
Query: 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
+ ++ G GYVAPE + D +S G + L+ G P
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI D GLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDAGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428
C +RL NG DL++ G+ + P + A A G +L + I
Sbjct: 410 CFQTMDRLYFVMEYVNGG--DLMYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQ---SKGI 463
Query: 429 IHRNISSKCILLDDDFEPKISDFGLAR--LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
I+R++ ++LD + KI+DFG+ + + + + T G Y+APE +
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC------GTPDYIAPE---II 514
Query: 487 VATPKG---DVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543
P G D ++FG +L E++ G+ P E F+ + +A S + AI K
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 574
Query: 544 CLVAK 548
L+ K
Sbjct: 575 GLMTK 579
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 158
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 213
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 185
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR I G+
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGDA 201
Query: 473 G-DLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI D GLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDRGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFG-DLGYVAPEYART 485
+ IHR+++++ ILL + KI DFGLAR I G+ L ++APE
Sbjct: 159 KCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGDARLPLKWMAPETIFD 215
Query: 486 LVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
+G +LH+ +IIHR+I +L+ +D KI+DFG++ D LS V G
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV----GT 200
Query: 475 LGYVAPE---YARTLVATPKGDVYSFGTVLLELVTGERP---TNVAKAPETFKGNLVEWI 528
++APE R + + DV++ G L V G+ P + K +E+
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP 260
Query: 529 AQLSSTGQLQDAIDKCL 545
Q L+D I + L
Sbjct: 261 DQPDIAEDLKDLITRML 277
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFG-DLGYVAPEYART 485
+ IHR+++++ ILL + KI DFGLAR I G+ L ++APE
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 486 LVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 182
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFG-DLGYVAPEYART 485
+ IHR+++++ ILL + KI DFGLAR I G+ L ++APE
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGDARLPLKWMAPETIFD 224
Query: 486 LVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 135
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 190
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 31/212 (14%)
Query: 313 IGSGRTGTMYKALLEDGT------SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G T+YK L + T L ++L S+R + F E L +++ N+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER--QRFKEEAEXLKGLQHPNIVRFY 91
Query: 367 ----GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSV--DWPRRLKIAIGAARGFAWL 420
KK +LV + +G+L L V W R++ +G +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 421 HHNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
H P IIHR++ I + KI D GLA L ++F G + A
Sbjct: 146 HTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR------ASFAKAVIGTPEFXA 198
Query: 480 PE-YARTLVATPKGDVYSFGTVLLELVTGERP 510
PE Y + DVY+FG LE T E P
Sbjct: 199 PEXYEEKYDESV--DVYAFGXCXLEXATSEYP 228
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 413 AARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472
A+G +L + + IHR+++++ ILL + KI DFGLAR I G+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR---DIXKDPDXVRKGDA 210
Query: 473 G-DLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
L ++APE V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 132
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 187
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 133
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 188
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH-TGFLTEYVAT 194
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR S + E Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMTPEVVTRYYRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH-TGFLTEYVAT 190
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH-TGFLTEYVAT 190
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH-TGFLTEYVAT 194
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH-TGFLTEYVAT 190
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 143 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 198
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 190
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 194
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH-TGFLTEYVAT 210
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 246
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A + G + VK+L +S K E+ L +K+ N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 368 FCMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
F A+ + + H+ L +++ T V + + RG ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ + +++D E KI D GLAR H + G Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDGGLAR-------HTDDEMTGYVATRWYRAPEIM 194
Query: 484 RTLVATPKG-DVYSFGTVLLELVTG 507
+ + D++S G ++ EL+TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 192
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ + K+ DFGL+R M ST+ G L ++APE
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 565
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLXEXVAT 194
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 140 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLXEXVAT 195
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 188
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 140 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 195
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 141 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 196
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 132 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 187
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 194
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 192
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD----LGYVAPEY 482
+ IHR+++++ ILL + KI DFGLAR + + GD L ++APE
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK------GDARLPLKWMAPET 221
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVE 526
V T + DV+SFG +L E+ + G P K E F L E
Sbjct: 222 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 188
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 194
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 190
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +L++ + KI DFGLAR+ +P H + F+
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH-TGFLTEXVAT 210
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-TGFLTEYVAT 210
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 246
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++HR++ +LL+ + KI DFGLAR+ +P H + F+
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH-TGFLTEYVAT 192
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVTGERP 510
Y APE K D++S G +L E+++ RP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP 228
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 40/220 (18%)
Query: 310 NNIIGSGRTGTMYKALLED--------GTSLMVKRLQDSQRSEKEFVAEMATLGS-VKNR 360
N +G G ++K + + T +++K L + R+ E E A++ S + ++
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
+LV G C+ E +LV + + GSL D + ++ W +L++A A +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSL-DTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 421 HHNCNPRIIHRNISSKCILL--DDDFEP------KISDFGLARLMNPIDTHLSTFVNGEF 472
N +IH N+ +K ILL ++D + K+SD G++ + P D
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER------ 180
Query: 473 GDLGYVAPEYARTLVATPKG-----DVYSFGTVLLELVTG 507
+ +V PE + PK D +SFGT L E+ +G
Sbjct: 181 --IPWVPPE----CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 88
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 205 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 95
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 155 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 211
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 212 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 84
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 144 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 200
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 201 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 80
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 140 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 196
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 197 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 35/219 (15%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
A++H I HR+I + +LLD D K+ DFG A+ + V GE ++
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----------VRGE-PNVS 181
Query: 477 YVAPEYART--LV-----ATPKGDVYSFGTVLLELVTGE 508
Y+ Y R L+ T DV+S G VL EL+ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 335 KRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
+RL S+R S +E E+ L +++ N++ L K + +L+ + + G L+D L
Sbjct: 62 RRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL- 120
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP----KI 448
A+ + D + I G +LH + RI H ++ + I+L D P K+
Sbjct: 121 -AEKESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
DFG+A + + + F EF VAPE + D++S G + L++G
Sbjct: 175 IDFGIAHKIEAGNEFKNIFGTPEF-----VAPEIVNYEPLGLEADMWSIGVITYILLSGA 229
Query: 509 RP 510
P
Sbjct: 230 SP 231
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 335 KRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
+RL S+R S +E E+ L +++ N++ L K + +L+ + + G L+D L
Sbjct: 48 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL- 106
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP----KI 448
A+ + D + I G +LH + RI H ++ + I+L D P K+
Sbjct: 107 -AEKESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKL 160
Query: 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
DFG+A + + + F EF VAPE + D++S G + L++G
Sbjct: 161 IDFGIAHKIEAGNEFKNIFGTPEF-----VAPEIVNYEPLGLEADMWSIGVITYILLSGA 215
Query: 509 RP 510
P
Sbjct: 216 SP 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLVGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 35/219 (15%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 89
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
A++H I HR+I + +LLD D K+ DFG A+ + V GE ++
Sbjct: 149 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----------VRGE-PNVS 194
Query: 477 YVAPEYART--LV-----ATPKGDVYSFGTVLLELVTGE 508
Y+ Y R L+ T DV+S G VL EL+ G+
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 110
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 226
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 227 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
++ F + +G G T +Y+ + ++ +K E+ L + + N++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLL-----HPADDTGKSVDWPRRLKIAIGAARGFA 418
L E LV + + G L+D + + D +V +++ A+ A
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV---KQILEAV------A 162
Query: 419 WLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
+LH N I+HR++ + +L D KI+DFGL++++ + G
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH-----QVLMKTVCGTP 214
Query: 476 GYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
GY APE R P+ D++S G + L+ G P
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 145
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR + FV + Y APE
Sbjct: 146 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMVPFVVTRY----YRAPEVI 199
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 77
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 137 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 193
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 194 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 88
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 205 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 35/219 (15%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 81
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
A++H I HR+I + +LLD D K+ DFG A+ + V GE ++
Sbjct: 141 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----------VRGE-PNVS 186
Query: 477 YVAPEYART--LV-----ATPKGDVYSFGTVLLELVTGE 508
Y+ Y R L+ T DV+S G VL EL+ G+
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 335 KRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392
+RL S+R S +E E+ L +++ N++ L K + +L+ + + G L+D L
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL- 99
Query: 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP----KI 448
A+ + D + I G +LH + RI H ++ + I+L D P K+
Sbjct: 100 -AEKESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
DFG+A + + + F EF VAPE + D++S G + L++G
Sbjct: 154 IDFGIAHKIEAGNEFKNIFGTPEF-----VAPEIVNYEPLGLEADMWSIGVITYILLSGA 208
Query: 509 RP 510
P
Sbjct: 209 SP 210
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 35/219 (15%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 104
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
A++H I HR+I + +LLD D K+ DFG A+ + V GE ++
Sbjct: 164 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----------VRGE-PNVS 209
Query: 477 YVAPEYART--LV-----ATPKGDVYSFGTVLLELVTGE 508
Y+ Y R L+ T DV+S G VL EL+ G+
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 116/298 (38%), Gaps = 40/298 (13%)
Query: 306 SFSKNNIIGSGRTGTMYKA-LLEDGTSLMVKRLQD----SQRSEKEFVAEMATLGSVKNR 360
+F IG G+ +Y+A L DG + +K++Q ++ + + E+ L + +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
N++ + E +V + G L ++ + + K + +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 421 HHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
H R++HR+I + + K+ D GL R + T + V + Y++P
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY----YMSP 205
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540
E K D++S G +L E+ + P F G+ + + L
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSP---------FYGDKMNLYS-------LCKK 249
Query: 541 IDKC----LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594
I++C L + EL Q + + C+ P P++RP + VY + +R H T
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNM---CINPD-PEKRPDVTYVYD----VAKRMHACT 299
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 198
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 114
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 174 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 230
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 231 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 258
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLVGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 310 NNIIGSGRTGTMYKALLED--------GTSLMVKRLQDSQRSEKEFVAEMATLGS-VKNR 360
N +G G ++K + + T +++K L + R+ E E A++ S + ++
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 361 NLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL 420
+LV G C E +LV + + GSL D + ++ W +L++A A +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSL-DTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 421 HHNCNPRIIHRNISSKCILL--DDDFEP------KISDFGLARLMNPIDTHLSTFVNGEF 472
N +IH N+ +K ILL ++D + K+SD G++ + P D
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER------ 180
Query: 473 GDLGYVAPEYARTLVATPKG-----DVYSFGTVLLELVTG 507
+ +V PE + PK D +SFGT L E+ +G
Sbjct: 181 --IPWVPPE----CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 112
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 172 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 228
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 229 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 110
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 226
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 227 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 254
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA-RLMNPIDTHLSTFVNGEFGD 474
G +LH + I+HR+++ +LL + KI+DFGLA +L P + H + G
Sbjct: 124 GMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-----CGT 175
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y++PE A + DV+S G + L+ G P
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQD + + E+ + + + N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIV 155
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 215 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 271
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 272 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 299
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLVGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ K+ DFGL+R M ST+ G L ++APE
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 185
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 39/272 (14%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 58
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDL--LHPADDTGKSVDWPRRLKIAIGAA 414
P+ + K RLL + P+ + L + P D + R + A
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFIT--ERGALQEELA 116
Query: 415 RGFAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFV 468
R F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 117 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD 174
Query: 469 NGEFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 175 ----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV--- 225
Query: 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 226 FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL--GYVAPEYAR 484
R +HR+I+++ +L+ K+ DFGL+R M ST+ G L ++APE
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-----STYYKASKGKLPIKWMAPESIN 565
Query: 485 TLVATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 349 AEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPAD----DTGKSVDWP 404
E+ L +++++++ L + +V ++ P G L+D + D + + V
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ 116
Query: 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL-ARLMNPIDTH 463
+A ++G+A HR++ + +L D+ + K+ DFGL A+ D H
Sbjct: 117 IVSAVAYVHSQGYA-----------HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 464 LSTFVNGEFGDLGYVAPEY--ARTLVATPKGDVYSFGTVLLELVTGERP 510
L T G L Y APE ++ + + + DV+S G +L L+ G P
Sbjct: 166 LQTCC----GSLAYAAPELIQGKSYLGS-EADVWSMGILLYVLMCGFLP 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR S + E Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMEPEVVTRYYRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTG 507
+ D++S G ++ E++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 313 IGSGRTGTMYKALL----EDGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLL 366
IG G+ G +++ + ++ +K ++ S ++F+ E T+ + ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426
G V+ M +L +L S+D + A + A+L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 427 RIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
R +HR+I+++ +L+ + K+ DFGL+R M D+ G+ + ++APE
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKASKGKL-PIKWMAPESINFR 187
Query: 487 VATPKGDVYSFGTVLLE-LVTGERP 510
T DV+ FG + E L+ G +P
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 310 NNIIGSGRTGTMYKALLE----DGTSLMVKRLQ-DSQRSEKE-FVAEMATLGSVKNRNLV 363
N I+G G G +Y+ + + ++ VK + D KE F++E + ++ + ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH- 422
L+G + ++ ++ + P G L L ++ K + + ++ + A+L
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLESI 128
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
NC +HR+I+ + IL+ K+ DFGL+R + D + ++ + +++PE
Sbjct: 129 NC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP---IKWMSPES 181
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
T DV+ F + E+++ G++P
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 310 NNIIGSGRTGTMYKALLE----DGTSLMVKRLQ-DSQRSEKE-FVAEMATLGSVKNRNLV 363
N I+G G G +Y+ + + ++ VK + D KE F++E + ++ + ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH- 422
L+G + ++ ++ + P G L L ++ K + + ++ + A+L
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESI 132
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
NC +HR+I+ + IL+ K+ DFGL+R + D + ++ + +++PE
Sbjct: 133 NC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP---IKWMSPES 185
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
T DV+ F + E+++ G++P
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARL-MNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
II+R++ +LLD + K++D+G+ + + P DT STF G Y+APE R
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSTFC----GTPNYIAPEILRGE 228
Query: 487 VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538
D ++ G ++ E++ G P ++ + + N +++ Q+ Q++
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 310 NNIIGSGRTGTMYKALLE----DGTSLMVKRLQ-DSQRSEKE-FVAEMATLGSVKNRNLV 363
N I+G G G +Y+ + + ++ VK + D KE F++E + ++ + ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH- 422
L+G + ++ ++ + P G L L ++ K + + ++ + A+L
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLESI 144
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
NC +HR+I+ + IL+ K+ DFGL+R + D + ++ + +++PE
Sbjct: 145 NC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP---IKWMSPES 197
Query: 483 ARTLVATPKGDVYSFGTVLLELVT-GERP 510
T DV+ F + E+++ G++P
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 86
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 202
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 257
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++SS + Q I CL + D F+ ++
Sbjct: 258 RVSS--ECQHLIRWCLALRPSDRPTFEEIQ 285
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 428 IIHRNISSKCILL---DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
++HR++ + +L +D+ E KI DFG ARL P + L T L Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT----PCFTLHYAAPELLN 182
Query: 485 TLVATPKGDVYSFGTVLLELVTGERP 510
D++S G +L +++G+ P
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 299 DLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLM-VKRLQDSQRSE------KEFVAEM 351
D+ + K + +G G+ T+YKA ++ ++ +K+++ RSE + + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 352 ATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLK-IA 410
L + + N++ LL K LV+ M DL D + P +K
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET----DLEVIIKDNSLVLT-PSHIKAYM 118
Query: 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR-LMNPIDTHLSTFVN 469
+ +G +LH + I+HR++ +LLD++ K++DFGLA+ +P + V
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVT 175
Query: 470 GEFGDLGYVAPEYARTLVATPKG-DVYSFGTVLLELV 505
Y APE G D+++ G +L EL+
Sbjct: 176 R-----WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 87
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 203
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 258
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++SS + Q I CL + D F+ ++
Sbjct: 259 RVSS--ECQHLIRWCLALRPSDRPTFEEIQ 286
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 86
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 202
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 257
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++SS + Q I CL + D F+ ++
Sbjct: 258 RVSS--ECQHLIRWCLALRPSDRPTFEEIQ 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 87
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 203
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 258
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++SS + Q I CL + D F+ ++
Sbjct: 259 RVSS--ECQHLIRWCLALRPSDRPTFEEIQ 286
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A+ G + +K+L +SE K E+ L +++ N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 368 FCMAKKERLLVYKHMPNGSLYD--LLHPADDT------GKSVDWPRRLKIAIGAARGFAW 419
F A R + YD L+ P T G + + +G +
Sbjct: 110 FTPASSLR----------NFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
+H + ++HR++ + +++D E KI DFGLAR H + G Y A
Sbjct: 160 IH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRA 209
Query: 480 PEYARTLVATPKG-DVYSFGTVLLELVTGE 508
PE + + + D++S G ++ E++TG+
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 54
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 170
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 225
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++SS + Q I CL + D F+ ++
Sbjct: 226 RVSS--ECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR S + E Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-----TSFMMEPEVVTRYYRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMV 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLK 408
E+A L +K+ N+V L + LV + + G L+D +L T K D ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK--DASLVIQ 113
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMNPIDTHLS 465
+ A + +LH N I+HR++ + +L +++ + I+DFGL+++ +
Sbjct: 114 QVLSAVK---YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ------N 161
Query: 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
++ G GYVAPE + D +S G + L+ G P
Sbjct: 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPAFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 404 PRRL--KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA-RLMNPI 460
P R+ K+ + + +L +IHR++ ILLD+ + K+ DFG++ RL++
Sbjct: 122 PERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
Query: 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATP-----KGDVYSFGTVLLELVTGERP 510
S G Y+APE T + DV+S G L+EL TG+ P
Sbjct: 180 AKDRSA------GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 59
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 175
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 176 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 228
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 229 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 57
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 58 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 117
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 173
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 174 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 226
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 227 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 256
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + IIHR++ + +++D E +I DFGLAR D ++ +V +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRW-- 193
Query: 475 LGYVAPE-------YARTLVATPKGDVYSFGTVLLELVTGE 508
Y APE Y +T+ D++S G ++ EL+ G+
Sbjct: 194 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGK 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 34/218 (15%)
Query: 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQ-DSQRSEKEFVAEMATLGSVKNRNLVP 364
F + +IGSG G ++KA DG + ++KR++ +++++E+E V +A L V N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE-VKALAKLDHV---NIVH 68
Query: 365 LLG---------------FCMAKKERLLVYKHM-PNGSLYDLLHPADDTGKSVDWPRRLK 408
G +K + L + G+L + G+ +D L+
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALE 126
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA-RLMNPIDTHLSTF 467
+ +G ++H + ++I+R++ I L D + KI DFGL L N S
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK- 182
Query: 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
G L Y++PE + + D+Y+ G +L EL+
Sbjct: 183 -----GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRNLVPLLG- 367
+GSG G++ A+ G + +K+L +SE K E+ L +++ N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 368 FCMAKKERLLVYKHMPNGSLYD--LLHPADDT------GKSVDWPRRLKIAIGAARGFAW 419
F A R + YD L+ P T G + + +G +
Sbjct: 92 FTPASSLR----------NFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVA 479
+H + ++HR++ + +++D E KI DFGLAR H + G Y A
Sbjct: 142 IH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRA 191
Query: 480 PEYARTLVATPKG-DVYSFGTVLLELVTGE 508
PE + + + D++S G ++ E++TG+
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 74
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 190
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 191 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 243
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 244 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 273
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 58
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 118
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 174
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 175 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 227
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 228 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 59
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 175
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 176 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 228
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 229 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 54
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 170
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 223
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 224 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 101
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 217
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 218 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 270
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 271 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 300
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 408 KIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467
KI + + L N +IIHR+I ILLD K+ DFG++ + +D+ T
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKT- 183
Query: 468 VNGEFGDLGYVAPEYARTLVATP----KGDVYSFGTVLLELVTGERP 510
+ G Y+APE + + DV+S G L EL TG P
Sbjct: 184 --RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 73
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 189
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 190 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 242
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 243 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 272
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + IIHR++ + +++D E +I DFGLAR D ++ +V +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRW-- 193
Query: 475 LGYVAPE-------YARTLVATPKGDVYSFGTVLLELVTGE 508
Y APE Y +T+ D++S G ++ EL+ G+
Sbjct: 194 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + IIHR++ + +++D E +I DFGLAR D ++ +V +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRW-- 185
Query: 475 LGYVAPE-------YARTLVATPKGDVYSFGTVLLELVTGE 508
Y APE Y +T+ D++S G ++ EL+ G+
Sbjct: 186 --YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGK 218
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 74
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 190
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 191 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 243
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 244 RQRVSXECQHLIRWCLALRPXDRPTFEEIQ 273
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 54
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 115 FFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 170
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 223
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 224 RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 59
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 175
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 176 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 228
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 229 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 258
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 130
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 185
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 93
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 153
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 209
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 210 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 262
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 263 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 292
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 86
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 202
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 255
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 256 RQRVSSECQHLIRWCLALRPSDRPTFEEIQ 285
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 130
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 185
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 81
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 141
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 197
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 198 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 250
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 251 RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 280
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 74
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 190
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 191 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 243
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 244 RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 273
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + ++ G + N V
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR---------ISDWGELPNGTRV 73
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 189
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 190 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 242
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 243 RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 148
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 149 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 202
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMV 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435
LV+ M G L+D L T K + + + A H N I+HR++
Sbjct: 100 FLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKP 152
Query: 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV------AT 489
+ ILLDDD K++DFG + ++P + S G Y+APE +
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEKLRSV-----CGTPSYLAPEIIECSMNDNHPGYG 207
Query: 490 PKGDVYSFGTVLLELVTGERP 510
+ D++S G ++ L+ G P
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPP 228
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+LE ++ + R +Q K E+ + V ++N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 137
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 191
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMV 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLXGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLXGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 101
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 217
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 218 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 270
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 271 RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 300
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 87
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 203
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 258
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++S + Q I CL + D F+ ++
Sbjct: 259 RVSX--ECQHLIRWCLALRPSDRPTFEEIQ 286
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLXGIKHLH-- 136
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 190
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMV 212
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARL-MNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
II+R++ +LLD + K++D+G+ + + P DT S F G Y+APE R
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFC----GTPNYIAPEILRGE 196
Query: 487 VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538
D ++ G ++ E++ G P ++ + + N +++ Q+ Q++
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 86
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 202
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 203 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 257
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++S + Q I CL + D F+ ++
Sbjct: 258 RVSX--ECQHLIRWCLALRPSDRPTFEEIQ 285
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 106
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 166
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 167 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 222
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 223 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV---FF 275
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 276 RQRVSXECQHLIRWCLALRPSDRPTFEEIQ 305
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
+ + ++GSG G++Y + + D + +K ++ + S+ G + N V
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISD---------WGELPNGTRV 87
Query: 364 PLLGFCMAKKE-------RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416
P+ + K RLL + P+ + L P R + AR
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 417 FAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNG 470
F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFD-- 203
Query: 471 EFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529
G Y PE+ R + V+S G +L ++V G+ P + E G V +
Sbjct: 204 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHDEEIIGGQVFFRQ 258
Query: 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
++S + Q I CL + D F+ ++
Sbjct: 259 RVSX--ECQHLIRWCLALRPSDRPTFEEIQ 286
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 181
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 235
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMV 257
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQ + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEF--GD 474
A++H I HR+I + +LLD D K+ DFG A+ + + ++S + + +
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508
L + A +Y ++ DV+S G VL EL+ G+
Sbjct: 193 LIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 23/199 (11%)
Query: 318 TGTMYKALLEDGTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375
TG Y A + +R + S+R S ++ E++ L +++ N++ L K +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435
+L+ + + G L+D L + S+ + G +LH + +I H ++
Sbjct: 90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 436 KCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPK 491
+ I+L D PK I DFGLA ++ FG +VAPE +
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 492 GDVYSFGTVLLELVTGERP 510
D++S G + L++G P
Sbjct: 198 ADMWSIGVITYILLSGASP 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435
LV+ M G L+D L T K + + + A H N I+HR++
Sbjct: 87 FLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKP 139
Query: 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV------AT 489
+ ILLDDD K++DFG + ++P + + G Y+APE +
Sbjct: 140 ENILLDDDMNIKLTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYG 194
Query: 490 PKGDVYSFGTVLLELVTGERP 510
+ D++S G ++ L+ G P
Sbjct: 195 KEVDMWSTGVIMYTLLAGSPP 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARL-MNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
II+R++ +LLD + K++D+G+ + + P DT S F G Y+APE R
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFC----GTPNYIAPEILRGE 185
Query: 487 VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538
D ++ G ++ E++ G P ++ + + N +++ Q+ Q++
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K L+ + KR S R S ++ E++ L +++ N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L K + +L+ + + G L+D L + S+ + G +LH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLH--- 131
Query: 425 NPRIIHRNISSKCILLDDDFEPK----ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ +I H ++ + I+L D PK I DFGLA ++ FG +VAP
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----FGNEFKNIFGTPEFVAP 186
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARL-MNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
II+R++ +LLD + K++D+G+ + + P DT S F G Y+APE R
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT-TSXFC----GTPNYIAPEILRGE 181
Query: 487 VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538
D ++ G ++ E++ G P ++ + + N +++ Q+ Q++
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435
LV+ M G L+D L T K + + + A H N I+HR++
Sbjct: 100 FLVFDLMKKGELFDYL-----TEKVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKP 152
Query: 436 KCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV------AT 489
+ ILLDDD K++DFG + ++P + + G Y+APE +
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 490 PKGDVYSFGTVLLELVTGERP 510
+ D++S G ++ L+ G P
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPP 228
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQ + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
A++H I HR+I + +LLD D K+ DFG A+ + V GE ++
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----------VRGE-PNVS 181
Query: 477 YVAPEYART--LV-----ATPKGDVYSFGTVLLELVTGE 508
Y+ Y R L+ T DV+S G VL EL+ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
+G ++H IIHR++ + +++D E KI DFGLAR D+ + V +
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRW-- 190
Query: 475 LGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGE 508
Y APE + T D++S G ++ E++TG+
Sbjct: 191 --YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++IHR++ +L++++ E KI DFG+AR + F+
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVT 506
Y APE +L + D++S G + E++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 350 EMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLK 408
E+A L +K+ N+V L + LV + + G L+D ++ T K D ++
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK--DASTLIR 127
Query: 409 IAIGAARGFAWLHHNCNPRIIHRNISSKCILL---DDDFEPKISDFGLARLMNPIDTHLS 465
+ A +LH I+HR++ + +L D++ + ISDFGL+++ D +S
Sbjct: 128 QVLDAVY---YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV-MS 180
Query: 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
T G GYVAPE + D +S G + L+ G P
Sbjct: 181 TAC----GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 181
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 235
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMV 257
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMV--KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363
S++ +IG+G G +Y+A L D L+ K LQ + E+ + + + N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIV 76
Query: 364 PLLGFCMAKKERL------LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
L F + E+ LV ++P ++Y + +++ R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEP-KISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
A++H I HR+I + +LLD D K+ DFG A+ + V GE ++
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----------VRGE-PNVS 181
Query: 477 YVAPEYART--LV-----ATPKGDVYSFGTVLLELVTGE 508
Y+ Y R L+ T DV+S G VL EL+ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474
RG ++H + ++IHR++ +L++++ E KI DFG+AR + F+
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 475 LGYVAPEYARTLVATPKG-DVYSFGTVLLELVT 506
Y APE +L + D++S G + E++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV- 487
+HR+I +LLD + +++DFG MN T S+ G Y++PE + +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYISPEILQAMED 269
Query: 488 ----ATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
P+ D +S G + E++ GE P ET+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV- 487
+HR+I +LLD + +++DFG MN T S+ G Y++PE + +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYISPEILQAMED 253
Query: 488 ----ATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520
P+ D +S G + E++ GE P ET+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 142
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 143 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 196
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 198
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 143
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 197
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 137
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 191
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 136
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 190
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 137
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 191
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 313 IGSGRTGTM---YKALLEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
IGSG G + Y A+L+ ++ + R +Q K E+ + V ++N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 369 CMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423
+K + + + + + +L ++ +D R + G LH
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH-- 144
Query: 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
+ IIHR++ I++ D KI DFGLAR ++ +V + Y APE
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRY----YRAPEVI 198
Query: 484 RTLVATPKGDVYSFGTVLLELV 505
+ D++S G ++ E+V
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMV 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 101/254 (39%), Gaps = 30/254 (11%)
Query: 312 IIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEM-ATLGSVKNRNLVPL 365
+IG G G + A + + VK LQ ++ EK ++E L +VK+ LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 366 LGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
F ++L V ++ G L+ L + PR A A +LH
Sbjct: 105 -HFSFQTADKLYFVLDYINGGELFYHLQ----RERCFLEPRARFYAAEIASALGYLH--- 156
Query: 425 NPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
+ I++R++ + ILLD ++DFGL + ++ STF G Y+APE
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC----GTPEYLAPEVLH 212
Query: 485 TLVATPKGDVYSFGTVLLELVTGERP----------TNVAKAPETFKGNLVEWIAQLSST 534
D + G VL E++ G P N+ P K N+ L
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLE- 271
Query: 535 GQLQDAIDKCLVAK 548
G LQ K L AK
Sbjct: 272 GLLQKDRTKRLGAK 285
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 430 HRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT 489
HR++ + IL+ D + DFG+A D L+ N G L Y APE AT
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGN-TVGTLYYXAPERFSESHAT 213
Query: 490 PKGDVYSFGTVLLELVTGERP 510
+ D+Y+ VL E +TG P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN 140
R+ L L GL+ P R +++ L L N L LPDD + +G LT L L N
Sbjct: 105 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNR 163
Query: 141 FSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKS-FSVANNLLSGSIPT 195
S L+ L L NR + P LGRL + + ANNL ++PT
Sbjct: 164 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL--SALPT 217
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNN 140
R+ L L GL+ P R +++ L L N L LPDD + +G LT L L N
Sbjct: 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNR 164
Query: 141 FSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKS-FSVANNLLSGSIPT 195
S L+ L L NR + P LGRL + + ANNL ++PT
Sbjct: 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL--SALPT 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLED---GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
N F ++G G G + L+++ G +K L+ K+ VA T V +
Sbjct: 151 NEFEYLKLLGKGTFGKV--ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 362 LVPLL---GFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
P L + +RL V ++ G L+ H + + S D R I +A
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--L 264
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
+LH N +++R++ + ++LD D KI+DFGL + + TF G Y
Sbjct: 265 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC----GTPEY 318
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVTGERP 510
+APE Y R + D + G V+ E++ G P
Sbjct: 319 LAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 351
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 414 ARGFAW-----LHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTF 467
AR F W + H N ++HR+I + IL+D + E K+ DFG L+ DT + F
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDF 216
Query: 468 VNGEFGDLGYVAPEYARTLVATPK-GDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526
G Y PE+ R + V+S G +L ++V G+ P E +G +
Sbjct: 217 D----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV-- 268
Query: 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLK 559
+ + + Q I CL + D F+ ++
Sbjct: 269 -FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 300
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLED---GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
N F ++G G G + L+++ G +K L+ K+ VA T V +
Sbjct: 148 NEFEYLKLLGKGTFGKV--ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 362 LVPLL---GFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
P L + +RL V ++ G L+ H + + S D R I +A
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--L 261
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
+LH N +++R++ + ++LD D KI+DFGL + + TF G Y
Sbjct: 262 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC----GTPEY 315
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVTGERP 510
+APE Y R + D + G V+ E++ G P
Sbjct: 316 LAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 348
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 415 RGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLSTFVNGEFG 473
RG ++H + ++HR++ + ++ +D KI DFGLAR+M+P +H G
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 474 DLGYVAPEYARTLVA----TPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLV 525
Y +P R L++ T D+++ G + E++TG+ T A A E + L+
Sbjct: 188 K-WYRSP---RLLLSPNNYTKAIDMWAAGCIFAEMLTGK--TLFAGAHELEQMQLI 237
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQ-DSQRSEKEFVAEMATLG--------- 355
F + +IGSG G ++KA DG + +++R++ +++++E+E V +A L
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE-VKALAKLDHVNIVHYNG 72
Query: 356 --------------SVKNRNLVPLLGFCMAKKERLLVYKHMP---NGSLYDLLHPADDTG 398
S+++ + P ++ + ++ M G+L + G
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RG 130
Query: 399 KSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA-RLM 457
+ +D L++ +G ++H + ++IHR++ I L D + KI DFGL L
Sbjct: 131 EKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
N S G L Y++PE + + D+Y+ G +L EL+
Sbjct: 188 NDGKRTRSK------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K LE + KR + R S +E E++ L V + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L + + +L+ + + G L+D L + S+ G +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH--- 132
Query: 425 NPRIIHRNISSKCILLDDDFEP----KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+I H ++ + I+L D P K+ DFGLA + I+ + F N FG +VAP
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVE-FKNI-FGTPEFVAP 187
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K LE + KR + R S +E E++ L V + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L + + +L+ + + G L+D L + S+ G +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH--- 132
Query: 425 NPRIIHRNISSKCILLDDDFEP----KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+I H ++ + I+L D P K+ DFGLA + I+ + F N FG +VAP
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVE-FKNI-FGTPEFVAP 187
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K LE + KR + R S +E E++ L V + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L + + +L+ + + G L+D L + S+ G +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH--- 132
Query: 425 NPRIIHRNISSKCILLDDDFEP----KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+I H ++ + I+L D P K+ DFGLA + I+ + F N FG +VAP
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVE-FKNI-FGTPEFVAP 187
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K LE + KR + R S +E E++ L V + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L + + +L+ + + G L+D L + S+ G +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH--- 132
Query: 425 NPRIIHRNISSKCILLDDDFEP----KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+I H ++ + I+L D P K+ DFGLA + I+ + F N FG +VAP
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVE-FKNI-FGTPEFVAP 187
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K LE + KR + R S +E E++ L V + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L + + +L+ + + G L+D L + S+ G +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH--- 132
Query: 425 NPRIIHRNISSKCILLDDDFEP----KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+I H ++ + I+L D P K+ DFGLA + FG +VAP
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-----GVEFKNIFGTPEFVAP 187
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 331 SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390
+++V+ +D+ ++ AE L VK+ +V L+ + L+ +++ G L+
Sbjct: 56 AMIVRNAKDTAHTK----AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQ 111
Query: 391 LHPA----DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446
L +DT + + + +A+G H II+R++ + I+L+
Sbjct: 112 LEREGIFMEDT--ACFYLAEISMALG---------HLHQKGIIYRDLKPENIMLNHQGHV 160
Query: 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
K++DFGL + H T + G + Y+APE D +S G ++ +++T
Sbjct: 161 KLTDFGLCKE----SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 507 GERP 510
G P
Sbjct: 217 GAPP 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 33/277 (11%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQ---DSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
+G G G + K + G + VKR++ +SQ ++ + ++ +V V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG- 117
Query: 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428
+ ++ + + + + SL D G+++ KIA+ + LH + +
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV- 487
IHR++ +L++ + K+ DFG++ + +D+ T + G Y+APE +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI---DAGCKPYMAPERINPELN 230
Query: 488 ---ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544
+ K D++S G ++EL P + P F+ QL+ +++
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQ--------------QLKQVVEEP 274
Query: 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581
D +F+ C L KERPT E+ Q
Sbjct: 275 SPQLPADKFSAEFVDFTSQC-LKKNSKERPTYPELMQ 310
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 331 SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390
+++V+ +D+ ++ AE L VK+ +V L+ + L+ +++ G L+
Sbjct: 56 AMIVRNAKDTAHTK----AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQ 111
Query: 391 LHPA----DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446
L +DT + + + +A+G H II+R++ + I+L+
Sbjct: 112 LEREGIFMEDT--ACFYLAEISMALG---------HLHQKGIIYRDLKPENIMLNHQGHV 160
Query: 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
K++DFGL + H T + G + Y+APE D +S G ++ +++T
Sbjct: 161 KLTDFGLCKE----SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
Query: 507 GERP 510
G P
Sbjct: 217 GAPP 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 26/244 (10%)
Query: 288 FEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDS----QRS 343
F + +MRL F +IG G G + L++ + ++ + +R+
Sbjct: 62 FTSKVKQMRLH-----REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA 116
Query: 344 EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVD 402
E E + + + L + L LV + G L LL +D
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM 176
Query: 403 WPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG-LARLMNPID 461
L + A LH+ +HR+I IL+D + +++DFG +LM
Sbjct: 177 ARFYLAEMVIAIDSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
Query: 462 THLSTFVNGEFGDLGYVAPEYARTLVAT-----PKGDVYSFGTVLLELVTGERPTNVAKA 516
S V G Y++PE + + P+ D +S G + E++ GE P
Sbjct: 231 VQSSVAV----GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 517 PETF 520
ET+
Sbjct: 287 VETY 290
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLARLMNPIDTHLSTFVNGEFG 473
A+ H N I+HRN+ + +LL + K++DFGLA I+ + S +G G
Sbjct: 141 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFAG 192
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
GY++PE + + D+++ G +L L+ G P
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA--EMATLGSVKNRNLVPLLGFCM 370
+GSG G +++ + + + V + ++ ++ E++ + + + L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 371 AKKERLLVYKHMPNGSLYDLLHPAD---DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427
K E +L+ + + G L+D + D + +++ R+ A G +H +
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ------ACEGLKHMHEHS--- 169
Query: 428 IIHRNISSKCILLDDDFEP--KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART 485
I+H +I + I+ + KI DFGLA +NP + T EF APE
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA-----APEIVDR 224
Query: 486 LVATPKGDVYSFGTVLLELVTGERP 510
D+++ G + L++G P
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 31/237 (13%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLED---GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
N F ++G G G + L+++ G +K L+ K+ VA T V +
Sbjct: 8 NEFEYLKLLGKGTFGKV--ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 362 LVPLL---GFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
P L + +RL V ++ G L+ H + + S D R I +A
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--L 121
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
+LH N +++R++ + ++LD D KI+DFGL + + F G Y
Sbjct: 122 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTPEY 175
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
+APE Y R + D + G V+ E++ G P + F+ L+E I
Sbjct: 176 LAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 226
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 67/343 (19%)
Query: 268 PEGNKWAK-SLTGTKGIKVSL-----FEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTM 321
PE K + S G KG K + FE+S+ + +S+ I+G G +GT+
Sbjct: 1 PEKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSE-----------KILGYGSSGTV 49
Query: 322 YKALLEDGTSLMVKRLQ----DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377
G + VKR+ D E + + E S + N++ +C +R L
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE-----SDDHPNVIRY--YCSETTDRFL 102
Query: 378 -VYKHMPNGSLYDLLHPADDTGKSVDWPRR---LKIAIGAARGFAWLHHNCNPRIIHRNI 433
+ + N +L DL+ + + +++ + + + A G A LH + +IIHR++
Sbjct: 103 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDL 159
Query: 434 SSKCILLD-------------DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ IL+ ++ ISDFGL + ++ +N G G+ AP
Sbjct: 160 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAP 219
Query: 481 EYARTLVA---TPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
E T D++S G V +++ G+ P + E+ N++ I L
Sbjct: 220 ELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---NIIRGIFSLDEMKC 276
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
L D+ L+A+ D + ++ P +RPT +V
Sbjct: 277 LH---DRSLIAEATD---------LISQMIDHDPLKRPTAMKV 307
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 67/343 (19%)
Query: 268 PEGNKWAK-SLTGTKGIKVSL-----FEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTM 321
PE K + S G KG K + FE+S+ + +S+ I+G G +GT+
Sbjct: 1 PEKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSE-----------KILGYGSSGTV 49
Query: 322 YKALLEDGTSLMVKRLQ----DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377
G + VKR+ D E + + E S + N++ +C +R L
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE-----SDDHPNVIRY--YCSETTDRFL 102
Query: 378 -VYKHMPNGSLYDLLHPADDTGKSVDWPRR---LKIAIGAARGFAWLHHNCNPRIIHRNI 433
+ + N +L DL+ + + +++ + + + A G A LH + +IIHR++
Sbjct: 103 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDL 159
Query: 434 SSKCILLD-------------DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+ IL+ ++ ISDFGL + ++ +N G G+ AP
Sbjct: 160 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAP 219
Query: 481 EYARTLVA---TPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536
E T D++S G V +++ G+ P + E+ N++ I L
Sbjct: 220 ELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---NIIRGIFSLDEMKC 276
Query: 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 579
L D+ L+A+ D + ++ P +RPT +V
Sbjct: 277 LH---DRSLIAEATD---------LISQMIDHDPLKRPTAMKV 307
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 31/237 (13%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLED---GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
N F ++G G G + L+++ G +K L+ K+ VA T V +
Sbjct: 9 NEFEYLKLLGKGTFGKV--ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 362 LVPLL---GFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
P L + +RL V ++ G L+ H + + S D R I +A
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--L 122
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
+LH N +++R++ + ++LD D KI+DFGL + + F G Y
Sbjct: 123 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTPEY 176
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
+APE Y R + D + G V+ E++ G P + F+ L+E I
Sbjct: 177 LAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 31/237 (13%)
Query: 305 NSFSKNNIIGSGRTGTMYKALLED---GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
N F ++G G G + L+++ G +K L+ K+ VA T V +
Sbjct: 10 NEFEYLKLLGKGTFGKV--ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 362 LVPLL---GFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF 417
P L + +RL V ++ G L+ H + + S D R I +A
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELF--FHLSRERVFSEDRARFYGAEIVSA--L 123
Query: 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477
+LH N +++R++ + ++LD D KI+DFGL + + F G Y
Sbjct: 124 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC----GTPEY 177
Query: 478 VAPE------YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
+APE Y R + D + G V+ E++ G P + F+ L+E I
Sbjct: 178 LAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 301 MKATNSFSKNNIIGSGRTGTMYKALLEDGTSLM----VKRLQDSQRSEKEFVAEMATLGS 356
+K +++ ++IG G G +Y A ++ + V R+ + K + E+ L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 357 VKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPAD-DTGKSVDWPRRLK------I 409
+K+ ++ L + E LL + LY +L AD D K P L I
Sbjct: 84 LKSDYIIRLHDLIIP--EDLLKF-----DELYIVLEIADSDLKKLFKTPIFLTEQHVKTI 136
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458
G ++H + IIHR++ LL+ D KI DFGLAR +N
Sbjct: 137 LYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 21/210 (10%)
Query: 315 SGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN-RNLVPLLGFCMAKK 373
S TG Y A +K+ + Q E + E+A L K+ ++ L
Sbjct: 50 SKSTGQEYAAKF-------LKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102
Query: 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNI 433
E +L+ ++ G ++ L P + + V +++ G +LH N I+H ++
Sbjct: 103 EIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDL 157
Query: 434 SSKCILLDDDF---EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATP 490
+ ILL + + KI DFG++R + + + G Y+APE T
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKIGH-----ACELREIMGTPEYLAPEILNYDPITT 212
Query: 491 KGDVYSFGTVLLELVTGERPTNVAKAPETF 520
D+++ G + L+T P ET+
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
L I I A +LH ++HR++ I D K+ DFGL M+ + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 467 FV--------NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
G+ G Y++PE + K D++S G +L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 108 GLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSG 167
LDLS+ +++ + +I K FLT L L+ N+ + +P+ + N + L L L HNR +
Sbjct: 228 ALDLSNLQIFN-ISANIFK-YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS 284
Query: 168 QIPPQLGQLGRLKSFSVANNLLSGSIPTFVNL 199
+P +LG +LK F +N+++ F NL
Sbjct: 285 -LPAELGSCFQLKYFYFFDNMVTTLPWEFGNL 315
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 407 LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466
L I + A +LH ++HR++ I D K+ DFGL M+ + +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 467 FV--------NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
G+ G Y++PE + K D++S G +L EL+
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLARLMNPIDTHLSTFVNGEFG 473
A+ H N I+HRN+ + +LL + K++DFGLA I+ + S +G G
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFAG 169
Query: 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
GY++PE + + D+++ G +L L+ G P
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLARLMNPIDTHLSTFVNGEF 472
A+ H N I+HRN+ + +LL + K++DFGLA I+ + S +G
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFA 168
Query: 473 GDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
G GY++PE + + D+++ G +L L+ G P
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLARLMNPIDTHLSTFVNGEF 472
A+ H N I+HRN+ + +LL + K++DFGLA I+ + S +G
Sbjct: 116 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHGFA 167
Query: 473 GDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
G GY++PE + + D+++ G +L L+ G P
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 133/323 (41%), Gaps = 69/323 (21%)
Query: 288 FEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQ----DSQRS 343
FE+S+ + +S+ I+G G +GT+ G + VKR+ D
Sbjct: 9 FEQSLKNLVVSE-----------KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM 57
Query: 344 EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL-VYKHMPNGSLYDLLHPADDTGKSVD 402
E + + E S + N++ +C +R L + + N +L DL+ + + +++
Sbjct: 58 EIKLLTE-----SDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLK 110
Query: 403 WPRR---LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-------------DDFEP 446
+ + + A G A LH + +IIHR++ + IL+ ++
Sbjct: 111 LQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY---------ARTLVATPKGDVYSF 497
ISDFGL + ++ + T +N G G+ APE R L T D++S
Sbjct: 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRL--TRSIDIFSM 225
Query: 498 GTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQ 556
G V +++ G+ P + E+ N++ I L L D+ L+A+ D
Sbjct: 226 GCVFYYILSKGKHPFGDKYSRES---NIIRGIFSLDEMKCLH---DRSLIAEATD----- 274
Query: 557 FLKVACNCVLPTIPKERPTMFEV 579
+ ++ P +RPT +V
Sbjct: 275 ----LISQMIDHDPLKRPTAMKV 293
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 313 IGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371
I TG +Y +L+ T + + + R+E++ L ++ + L +
Sbjct: 76 ISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ------VLEHIRQSPFLVTLHYAFQ 129
Query: 372 KKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIH 430
+ +L L+ ++ G L+ L + + ++I +G L H II+
Sbjct: 130 TETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIYVGEI--VLALEHLHKLGIIY 182
Query: 431 RNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF-GDLGYVAPEYARTLVAT 489
R+I + ILLD + ++DFGL++ +T + +F G + Y+AP+ R +
Sbjct: 183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY----DFCGTIEYMAPDIVRGGDSG 238
Query: 490 PKG--DVYSFGTVLLELVTGERPTNV 513
D +S G ++ EL+TG P V
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTV 264
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 305 NSFSKNNIIGSGRTG-TMYKALLEDGTSLMVKRLQDSQRSEK-----EFVAEMATLGSVK 358
+ F + IG+G G M +E G +K L D Q+ K + E L +V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
LV L +V ++MP G ++ L G+ + P A F
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR---RIGRFSE-PHARFYAAQIVLTFE 155
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYV 478
+LH + +I+R++ + +L+D K++DFG A+ + L G Y+
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYL 205
Query: 479 APEYARTLVATPKGDVYSFGTVLLELVTGERP 510
APE + D ++ G ++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 305 NSFSKNNIIGSGRTG-TMYKALLEDGTSLMVKRLQDSQRSEK-----EFVAEMATLGSVK 358
+ F + IG+G G M +E G +K L D Q+ K + E L +V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
LV L +V ++MP G ++ L G+ + P A F
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR---RIGRFSE-PHARFYAAQIVLTFE 155
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYV 478
+LH + +I+R++ + +L+D K++DFG A+ + L G Y+
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYL 205
Query: 479 APEYARTLVATPKGDVYSFGTVLLELVTGERP 510
APE + D ++ G ++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRL----QDSQRSEKEFVAEMATLGSVKNRNLVPLLG 367
+G G G ++K++ G + VK++ Q+S +++ F M + N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 368 FCMAKKER--LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN 425
A +R LV+ +M LH A ++ + + + +LH
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LH-AVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 426 PRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI-----DTHLSTFVNGE-FGD----- 474
++HR++ ILL+ + K++DFGL+R I + LS N E F D
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 475 LGYVAPEYART---LVATPKG----DVYSFGTVLLELVTGE 508
YVA + R L+ + K D++S G +L E++ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 24/210 (11%)
Query: 313 IGSGRTGTMYKAL-----LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVP 364
+GSG+ + K LE + KR + R +E E++ L V + N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
L + + +L+ + + G L+D L + S+ G +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH--- 132
Query: 425 NPRIIHRNISSKCILLDDDFEP----KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAP 480
+I H ++ + I+L D P K+ DFGLA + I+ + F N FG +VAP
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVE-FKNI-FGTPEFVAP 187
Query: 481 EYARTLVATPKGDVYSFGTVLLELVTGERP 510
E + D++S G + L++G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR--- 484
+IHR++ +L++ + + K+ DFGLAR+++ S + G YVA + R
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 485 TLVATPKG----DVYSFGTVLLEL 504
++ + K DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA-EMATLGSVKNRNLVPLLGFCMA 371
+G G G +++ + + + + +++ V E++ L ++RN++ L +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 372 KKERLLVYKHMPNGSLYDLLHPAD---DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR- 427
+E +++++ + +++ ++ + + + V + ++ A+ H + P
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN 132
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
II++ S I KI +FG AR + P D F E Y APE + V
Sbjct: 133 IIYQTRRSSTI--------KIIEFGQARQLKPGDNFRLLFTAPE-----YYAPEVHQHDV 179
Query: 488 ATPKGDVYSFGTVLLELVTGERP 510
+ D++S GT++ L++G P
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINP 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + TF G Y+APE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC----GTPEYLAPEVLEDND 181
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 182 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 35/278 (12%)
Query: 313 IGSGRTGTMYKAL-LEDGTSLMVKRLQ---DSQRSEKEFVAEMATLGSVKNRNLVPLLGF 368
+G G G + K + G + VKR++ +SQ ++ + ++ +V V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG- 73
Query: 369 CMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI 428
+ ++ + + + + SL D G+++ KIA+ + LH + +
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 429 IHRNISSKCILLDDDFEPKISDFGLA-RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
IHR++ +L++ + K+ DFG++ L++ + + G Y+APE +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA------GCKPYMAPERINPEL 185
Query: 488 ----ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543
+ K D++S G ++EL P + P F+ QL+ +++
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQ--------------QLKQVVEE 229
Query: 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581
D +F+ C L KERPT E+ Q
Sbjct: 230 PSPQLPADKFSAEFVDFTSQC-LKKNSKERPTYPELMQ 266
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + TF G Y+APE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC----GTPEYLAPEVLEDND 181
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 182 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + TF G Y+APE
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC----GTPEYLAPEVLEDND 184
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 185 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 225
>pdb|3CDI|A Chain A, Crystal Structure Of E. Coli Pnpase
Length = 723
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 76 HPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLD 135
P E L RL D ++ FP G N + +S N P DI ++G +L
Sbjct: 89 RPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNP---DIVAMIGASAALS 145
Query: 136 LSSNNFSGSIPSNLANCTYLN 156
LS F+G P A Y+N
Sbjct: 146 LSGIPFNG--PIGAARVGYIN 164
>pdb|3GCM|A Chain A, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GCM|B Chain B, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GCM|C Chain C, Crystal Structure Of E. Coli Polynucleotide Phosphorylase
Bound To Rna And Rnase E
pdb|3GLL|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core
pdb|3GME|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase In
Complex With Rnase E And Manganese
Length = 549
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 76 HPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLD 135
P E L RL D ++ FP G N + +S N P DI ++G +L
Sbjct: 83 RPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNP---DIVAMIGASAALS 139
Query: 136 LSSNNFSGSIPSNLANCTYLN 156
LS F+G P A Y+N
Sbjct: 140 LSGIPFNG--PIGAARVGYIN 158
>pdb|3H1C|A Chain A, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|B Chain B, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|C Chain C, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|G Chain G, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|I Chain I, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|K Chain K, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|M Chain M, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|O Chain O, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|R Chain R, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|T Chain T, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|V Chain V, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
pdb|3H1C|X Chain X, Crystal Structure Of Polynucleotide Phosphorylase (Pnpase)
Core Bound To Rnase E And Tungstate
Length = 549
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 76 HPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLD 135
P E L RL D ++ FP G N + +S N P DI ++G +L
Sbjct: 83 RPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNP---DIVAMIGASAALS 139
Query: 136 LSSNNFSGSIPSNLANCTYLN 156
LS F+G P A Y+N
Sbjct: 140 LSGIPFNG--PIGAARVGYIN 158
>pdb|3CDJ|A Chain A, Crystal Structure Of The E. Coli KhS1 DOMAIN TRUNCATED
Pnpase
Length = 559
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 76 HPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLD 135
P E L RL D ++ FP G N + +S N P DI ++G +L
Sbjct: 89 RPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNP---DIVAMIGASAALS 145
Query: 136 LSSNNFSGSIPSNLANCTYLN 156
LS F+G P A Y+N
Sbjct: 146 LSGIPFNG--PIGAARVGYIN 164
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR--- 484
+IHR++ +L++ + + K+ DFGLAR+++ S + G + +VA + R
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 485 TLVATPKG----DVYSFGTVLLEL 504
++ + K DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 81 RVLNLRLTDMGLKGQFPRGI--RNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSS 138
R+ L L GLK F + +N SS+ LD+S N L D + L+LSS
Sbjct: 378 RLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSS 437
Query: 139 NNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194
N +GS+ L + L L +NR IP + L L+ +VA+N L S+P
Sbjct: 438 NMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQL-KSVP 489
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 30/221 (13%)
Query: 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKE-----FVAEMATLGSV 357
+ + K IG G G ++KA + G + +K++ +EKE + E+ L +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 74
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLY--------DLLHPADDTGKSVDWPRRLKI 409
K+ N+V L+ C K + GS+Y DL + ++
Sbjct: 75 KHENVVNLIEICRTKASPY----NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
G ++H N +I+HR++ + +L+ D K++DFGLAR +
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 470 GEFGDLGYVAPEYARTLVAT----PKGDVYSFGTVLLELVT 506
L Y PE L+ P D++ G ++ E+ T
Sbjct: 188 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 30/221 (13%)
Query: 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKE-----FVAEMATLGSV 357
+ + K IG G G ++KA + G + +K++ +EKE + E+ L +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 74
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLY--------DLLHPADDTGKSVDWPRRLKI 409
K+ N+V L+ C K + GS+Y DL + ++
Sbjct: 75 KHENVVNLIEICRTKASPY----NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
G ++H N +I+HR++ + +L+ D K++DFGLAR +
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 470 GEFGDLGYVAPEYARTLVAT----PKGDVYSFGTVLLELVT 506
L Y PE L+ P D++ G ++ E+ T
Sbjct: 188 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 89/221 (40%), Gaps = 30/221 (13%)
Query: 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKE-----FVAEMATLGSV 357
+ + K IG G G ++KA + G + +K++ +EKE + E+ L +
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 73
Query: 358 KNRNLVPLLGFCMAKKERLLVYKHMPNGSLY--------DLLHPADDTGKSVDWPRRLKI 409
K+ N+V L+ C K + GS+Y DL + ++
Sbjct: 74 KHENVVNLIEICRTKASPY----NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 410 AIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469
G ++H N +I+HR++ + +L+ D K++DFGLAR +
Sbjct: 130 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 470 GEFGDLGYVAPEYARTLVAT----PKGDVYSFGTVLLELVT 506
L Y PE L+ P D++ G ++ E+ T
Sbjct: 187 NRVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 305 NSFSKNNIIGSGRTG-TMYKALLEDGTSLMVKRLQDSQRSEK-----EFVAEMATLGSVK 358
+ F + IG+G G M +E G +K L D Q+ K + E L +V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 359 NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFA 418
LV L +V +++P G ++ L G+ + P A F
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFE 155
Query: 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYV 478
+LH + +I+R++ + +L+D K++DFG A+ + L G Y+
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYL 205
Query: 479 APEYARTLVATPKGDVYSFGTVLLELVTGERP 510
APE + D ++ G ++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKE-----FVAEMATLGSV 357
+ + K IG G G ++KA + G + +K++ +EKE + E+ L +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLL 74
Query: 358 KNRNLVPLLGFCMAK-------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIA 410
K+ N+V L+ C K K + + L LL + R +++
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG 470
+ G ++H N +I+HR++ + +L+ D K++DFGLAR +
Sbjct: 135 LN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 471 EFGDLGYVAPEYARTLVAT----PKGDVYSFGTVLLELVT 506
L Y PE L+ P D++ G ++ E+ T
Sbjct: 189 RVVTLWYRPPE---LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 129 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMS 185
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMS 232
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 132 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMS 188
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLM------NPIDTHLSTFVNGEFGDLGYVAPE 481
+IHR++ +L++ + + K+ DFGLAR++ N T + + Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 482 YARTLVATPKG-DVYSFGTVLLEL 504
T + DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTT--SVVKDSQVGAVNYMPPEAIKDMS 232
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 176 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMS 232
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 148 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMS 204
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P T S + + G + Y+ PE + +
Sbjct: 128 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTT--SVVKDSQVGTVNYMPPEAIKDMS 184
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 30/206 (14%)
Query: 315 SGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374
+G T+ + LE ++ MV LQ K F + N+VP +A E
Sbjct: 35 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLF----------NHPNIVPYRATFIADNE 84
Query: 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAI---GAARGFAWLHHNCNPRIIHR 431
+V M GS DL+ +D L IA G + ++HH +HR
Sbjct: 85 LWVVTSFMAYGSAKDLI-----CTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHR 136
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD-----LGYVAPEYARTL 486
++ + IL+ D + +S GL ++ I V +F L +++PE +
Sbjct: 137 SVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN 194
Query: 487 VA--TPKGDVYSFGTVLLELVTGERP 510
+ K D+YS G EL G P
Sbjct: 195 LQGYDAKSDIYSVGITACELANGHVP 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 69/323 (21%)
Query: 288 FEKSITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQ----DSQRS 343
FE+S+ + +S+ I+G G +GT+ G + VKR+ D
Sbjct: 9 FEQSLKNLVVSE-----------KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM 57
Query: 344 EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL-VYKHMPNGSLYDLLHPADDTGKSVD 402
E + + E S + N++ +C +R L + + N +L DL+ + + +++
Sbjct: 58 EIKLLTE-----SDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLK 110
Query: 403 WPRR---LKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-------------DDFEP 446
+ + + A G A LH + +IIHR++ + IL+ ++
Sbjct: 111 LQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY---------ARTLVATPKGDVYSF 497
ISDFGL + ++ +N G G+ APE R L T D++S
Sbjct: 168 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRL--TRSIDIFSM 225
Query: 498 GTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQ 556
G V +++ G+ P + E+ N++ I L L D+ L+A+ D
Sbjct: 226 GCVFYYILSKGKHPFGDKYSRES---NIIRGIFSLDEMKCLH---DRSLIAEATD----- 274
Query: 557 FLKVACNCVLPTIPKERPTMFEV 579
+ ++ P +RPT +V
Sbjct: 275 ----LISQMIDHDPLKRPTAMKV 293
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 30/206 (14%)
Query: 315 SGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374
+G T+ + LE ++ MV LQ K F + N+VP +A E
Sbjct: 51 TGEYVTVRRINLEACSNEMVTFLQGELHVSKLF----------NHPNIVPYRATFIADNE 100
Query: 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAI---GAARGFAWLHHNCNPRIIHR 431
+V M GS DL+ +D L IA G + ++HH +HR
Sbjct: 101 LWVVTSFMAYGSAKDLI-----CTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHR 152
Query: 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD-----LGYVAPEYARTL 486
++ + IL+ D + +S GL ++ I V +F L +++PE +
Sbjct: 153 SVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQN 210
Query: 487 VA--TPKGDVYSFGTVLLELVTGERP 510
+ K D+YS G EL G P
Sbjct: 211 LQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 100 IRNCSSMTGLDLSSNKLYGPLPDDISKLVGF--LTSLDLSSNNFSGSIPSNLANCTYLNS 157
++N +++ L+LSSN + DIS L G L L+ SSN + P LAN T L
Sbjct: 125 LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLER 177
Query: 158 LKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194
L + N+ S L +L L+S NN +S P
Sbjct: 178 LDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 85/208 (40%), Gaps = 20/208 (9%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
T SF + ++ TG Y + D ++ +L++ + + + E L +V L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVV--KLKEIEHT----LNEKRILQAVNFPFL 103
Query: 363 VPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH 422
V L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH- 158
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
+ +I+R++ + +++D K++DFGLA+ + L G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-------GTPEYLAPEI 209
Query: 483 ARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 95
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXE-PHARFYAAQIVLTFEYLH 151
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 201
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + F G Y+APE
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLEDND 186
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 187 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + F G Y+APE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLEDND 181
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 182 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + F G Y+APE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLEDND 181
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 182 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE------ 481
+++R+I + ++LD D KI+DFGL + + F G Y+APE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC----GTPEYLAPEVLEDND 181
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528
Y R + D + G V+ E++ G P F+ L+E I
Sbjct: 182 YGRAV------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 95
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 151
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 201
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 100 IRNCSSMTGLDLSSNKLYGPLPDDISKLVGF--LTSLDLSSNNFSGSIPSNLANCTYLNS 157
++N +++ L+LSSN + DIS L G L L SSN + P LAN T L
Sbjct: 125 LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLER 177
Query: 158 LKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194
L + N+ S L +L L+S NN +S P
Sbjct: 178 LDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 212
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 100 IRNCSSMTGLDLSSNKLYGPLPDDISKLVGF--LTSLDLSSNNFSGSIPSNLANCTYLNS 157
++N +++ L+LSSN + DIS L G L L SSN + P LAN T L
Sbjct: 125 LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLER 177
Query: 158 LKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194
L + N+ S L +L L+S NN +S P
Sbjct: 178 LDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 212
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
T SF + ++ TG Y + D ++ + + +EK + + N
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-------NFPF 103
Query: 363 VPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ L F L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFXE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D K++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 21/138 (15%)
Query: 429 IHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-- 486
+HR+I ILLD +++DFG + L D + + V G Y++PE + +
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGG 240
Query: 487 -----VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541
P+ D ++ G E+ G+ P ET+ G +V + LS
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY-GKIVHYKEHLSLP------- 292
Query: 542 DKCLVAKGVDNELFQFLK 559
LV +GV E F++
Sbjct: 293 ---LVDEGVPEEARDFIQ 307
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 311 NIIGSGRTGTMYKAL---LEDGTSLM-VKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLL 366
++IG G G +Y A E ++ V R+ + K + E+ L +K+ ++ L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 367 GFCMAKKERLLVYKHMPNGSLYDLLHPAD-DTGKSVDWPRRLK------IAIGAARGFAW 419
+ + LL + LY +L AD D K P L I G +
Sbjct: 92 DLIIP--DDLLKF-----DELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 420 LHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458
+H + IIHR++ LL+ D K+ DFGLAR +N
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 123
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 179
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 229
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D K++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
T SF + ++ TG Y + D ++ + + +EK + N
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------IQQAVNFPF 103
Query: 363 VPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ L F L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D K++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D K++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
T SF + ++ TG Y + D ++ + + +EK + + N
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-------NFPF 103
Query: 363 VPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ L F L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D K++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
T SF + ++ TG Y + D ++ + + +EK + + N
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-------NFPF 103
Query: 363 VPLLGFCMAKKERL-LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
+ L F L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D K++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 20/208 (9%)
Query: 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNL 362
T SF + ++ TG Y + D ++ +L++ + + + E L +V L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVV--KLKEIEHT----LNEKRILQAVNFPFL 103
Query: 363 VPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH 422
V L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH- 158
Query: 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
+ +I+R++ + +++D +++DFGLA+ + L G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-------GTPEYLAPEI 209
Query: 483 ARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 103
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-------GTPEYLAPE 209
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 312 IIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR------NLVP 364
+IG G G + KA + +K +++ +R ++ E+ L ++ + N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
+L + + ++ + + +LY+L+ G S+ R K A + LH N
Sbjct: 164 MLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVR--KFAHSILQCLDALHKN- 219
Query: 425 NPRIIHRNISSKCILLDDDFEP--KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
RIIH ++ + ILL K+ DFG + + + T + F Y APE
Sbjct: 220 --RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH---QRVYTXIQSRF----YRAPEV 270
Query: 483 ARTLVATPKGDVYSFGTVLLELVTG 507
D++S G +L EL+TG
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 88
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 144
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 145 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-------GTPEYLAPE 194
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 312 IIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR------NLVP 364
+IG G G + KA + +K +++ +R ++ E+ L ++ + N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 365 LLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC 424
+L + + ++ + + +LY+L+ G S+ R K A + LH N
Sbjct: 164 MLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVR--KFAHSILQCLDALHKN- 219
Query: 425 NPRIIHRNISSKCILLDDDFEP--KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEY 482
RIIH ++ + ILL K+ DFG + + + T + F Y APE
Sbjct: 220 --RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH---QRVYTXIQSRF----YRAPEV 270
Query: 483 ARTLVATPKGDVYSFGTVLLELVTG 507
D++S G +L EL+TG
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D K++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 40/196 (20%)
Query: 396 DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455
D G+++ KIA+ + LH + +IHR++ +L++ + K DFG++
Sbjct: 128 DKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISG 185
Query: 456 LM-----NPIDTHLSTF-----VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505
+ ID + +N E GY + K D++S G +EL
Sbjct: 186 YLVDDVAKDIDAGCKPYXAPERINPELNQKGY-----------SVKSDIWSLGITXIELA 234
Query: 506 TGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCV 565
P + P F+ QL+ +++ D +F+ C
Sbjct: 235 ILRFPYDSWGTP--FQ--------------QLKQVVEEPSPQLPADKFSAEFVDFTSQC- 277
Query: 566 LPTIPKERPTMFEVYQ 581
L KERPT E+ Q
Sbjct: 278 LKKNSKERPTYPELXQ 293
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 428 IIHRNISSKCILL---DDDFEPKISDFGLARLMNPIDTHLSTFV-NGEFGDLGYVAPEYA 483
IIHR++ C+LL ++ K+ FG+A I S V G G ++APE
Sbjct: 153 IIHRDVKPHCVLLASKENSAPVKLGGFGVA-----IQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ DV+ G +L L++G P
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG + +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 428 IIHRNISSKCILL---DDDFEPKISDFGLARLMNPIDTHLSTFV-NGEFGDLGYVAPEYA 483
IIHR++ C+LL ++ K+ FG+A I S V G G ++APE
Sbjct: 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVA-----IQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ DV+ G +L L++G P
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG + +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG + +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V +++P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +L+D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 428 IIHRNISSKCILLDDDFE---PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484
++HR++ + +LL + K++DFGLA + F G GY++PE R
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA----GTPGYLSPEVLR 179
Query: 485 TLVATPKGDVYSFGTVLLELVTGERP 510
D+++ G +L L+ G P
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L+ G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 313 IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVA--EMATLGSVKNRNLVPLLGFCM 370
+G G G +YKA +DG L+ + + A E+A L +K+ N++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 371 AKKER----LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRL--KIAIGAARGFAWLHHNC 424
+ +R L Y + + K V PR + + G +LH N
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 425 NPRIIHRNISSKCILL----DDDFEPKISDFGLARLMNP-------IDTHLSTFVNGEFG 473
++HR++ IL+ + KI+D G ARL N +D + TF
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF------ 199
Query: 474 DLGYVAPEY---ARTLVATPKGDVYSFGTVLLELVTGE 508
Y APE AR T D+++ G + EL+T E
Sbjct: 200 --WYRAPELLLGARHY--TKAIDIWAIGCIFAELLTSE 233
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
I+H ++ L+ D K+ DFG+A M P + + G + Y+ PE + +
Sbjct: 148 IVHSDLKPANFLIVDGM-LKLIDFGIANQMQP--DXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 488 ATPKG-----------DVYSFGTVLLELVTGERP 510
++ + DV+S G +L + G+ P
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 303 ATNSFSKNNIIGSGRTGTMYK-ALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN 361
T SF + ++ TG Y +L+ + +K+++ + + E L +V
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 102
Query: 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLH 421
LV L +V ++ P G ++ L G+ + P A F +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 422 HNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPE 481
+ +I+R++ + +++D +++DFG A+ + L G Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPE 208
Query: 482 YARTLVATPKGDVYSFGTVLLELVTGERP 510
+ D ++ G ++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D+ +++DFG A+ + L G
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 190
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC-------GTPE 224
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 77 PDENRVLN--LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSL 134
P E L+ +R ++ GLK P+GI +T L L N+ + +P ++S LT +
Sbjct: 5 PTECTCLDTVVRCSNKGLK-VLPKGIPR--DVTELYLDGNQ-FTLVPKELSN-YKHLTLI 59
Query: 135 DLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS 190
DLS+N S + +N T L +L L +NR P L L+ S+ N +S
Sbjct: 60 DLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS 115
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 14/82 (17%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
++HR++ ILL D+ + I DF LAR + D + + +V + Y APE LV
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRW----YRAPE----LV 205
Query: 488 ATPKG-----DVYSFGTVLLEL 504
KG D++S G V+ E+
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEM 227
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 416 GFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDL 475
G +LH I+H++I +LL KIS G+A ++P + + G
Sbjct: 121 GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--GSP 175
Query: 476 GYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERP 510
+ PE A L + K D++S G L + TG P
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 14/82 (17%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV 487
++HR++ ILL D+ + I DF LAR + D + + +V + Y APE LV
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRW----YRAPE----LV 205
Query: 488 ATPKG-----DVYSFGTVLLEL 504
KG D++S G V+ E+
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEM 227
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 204
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 224
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 428 IIHRNISSKCIL-LDDDFEP---KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
++HR++ IL +D+ P +I DFG A+ + + L T +VAPE
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA----NFVAPEVL 192
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
D++S G +L ++TG P
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 198
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 417 FAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476
F +LH + +I+R++ + +L+D +++DFG A+ + L G
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPE 203
Query: 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510
Y+APE + D ++ G ++ E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 24/102 (23%)
Query: 428 IIHRNISSKCILLDDDFEPKISDFGLARLMN---------PI-----DTHLSTF------ 467
I+HR++ L++ D K+ DFGLAR ++ PI D +L TF
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 468 ---VNGEFGDLGYVAPEYARTLV-ATPKGDVYSFGTVLLELV 505
+ G Y APE T DV+S G + EL+
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 428 IIHRNISSKCILL---DDDFEPKISDFGLARLMNPIDTHLSTFV-NGEFGDLGYVAPEYA 483
IIHR++ + +LL ++ K+ DFG+A I S V G G ++APE
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVA-----IQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ DV+ G +L L++G P
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRN 432
+ L+ + G L + L + G + LKI R +H P IIHR+
Sbjct: 106 QAEFLLLTELCKGQLVEFLKKMESRG-PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRD 163
Query: 433 ISSKCILLDDDFEPKISDFGLA 454
+ + +LL + K+ DFG A
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSA 185
>pdb|3NAW|A Chain A, Crystal Structure Of E. Coli O157:h7 Effector Protein Nlel
pdb|3NAW|B Chain B, Crystal Structure Of E. Coli O157:h7 Effector Protein Nlel
pdb|3NB2|A Chain A, Crystal Structure Of E. Coli O157:h7 Effector Protein Nlel
pdb|3NB2|B Chain B, Crystal Structure Of E. Coli O157:h7 Effector Protein Nlel
pdb|3NB2|C Chain C, Crystal Structure Of E. Coli O157:h7 Effector Protein Nlel
pdb|3NB2|D Chain D, Crystal Structure Of E. Coli O157:h7 Effector Protein Nlel
Length = 613
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 105 SMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSI-------PSNLANC----- 152
S+ GL+LSS G + DD + L+ L + +F SI +NL+NC
Sbjct: 43 SLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRAL 102
Query: 153 ---TYLNSLKLDHNRFSG----QIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADS 205
+ ++ L + F G Q PP L + + + +LSG+I V S S
Sbjct: 103 FENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKS 162
Query: 206 VTNNQGLC 213
T N G C
Sbjct: 163 NTINLGGC 170
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 26/149 (17%)
Query: 377 LVYKHMPNGSLYDLLHPA---DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNI 433
LV++ M GS+ +H ++ SV + A +LH N I HR++
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLH---NKGIAHRDL 137
Query: 434 SSKCILLD--DDFEP-KISDFGLARLMNPIDTHLSTFVNGEF----GDLGYVAPEYARTL 486
+ IL + + P KI DFGL + ++ S E G Y+APE
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIK-LNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 487 -----VATPKGDVYSFGTVLLELVTGERP 510
+ + D++S G +L L++G P
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 428 IIHRNISSKCILLDD-DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL 486
I HR+I + +L++ D K+ DFG A+ + P + ++ + F Y APE
Sbjct: 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAX-ICSRF----YRAPELMLGA 216
Query: 487 VA-TPKGDVYSFGTVLLELVTGE 508
TP D++S G V EL+ G+
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGK 239
>pdb|1E3P|A Chain A, Tungstate Derivative Of Streptomyces Antibioticus Pnpase
Gpsi Enzyme
Length = 757
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 76 HPDENRVLNLRLTDMGLKGQFPRGIRNCSSM--TGLDLSSNKLYGPLPDDISKLVGFLTS 133
P E+ +L RL D L+ F +G+RN + T + L+ + LY D+ + S
Sbjct: 107 RPSEDAILTCRLIDRPLRPSFKKGLRNEIQVVATIMALNPDHLY-----DVVAINAASAS 161
Query: 134 LDLSSNNFSGSI 145
L+ FSG I
Sbjct: 162 TQLAGLPFSGPI 173
>pdb|3SQV|A Chain A, Crystal Structure Of E. Coli O157:h7 E3 Ubiquitin Ligase,
Nlel, With A Human E2, Ubch7
pdb|3SQV|B Chain B, Crystal Structure Of E. Coli O157:h7 E3 Ubiquitin Ligase,
Nlel, With A Human E2, Ubch7
Length = 616
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 105 SMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSI-------PSNLANC----- 152
S+ GL+LSS G + DD + L+ L + +F SI +NL+NC
Sbjct: 46 SLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIIRAL 105
Query: 153 ---TYLNSLKLDHNRFSG----QIPPQLGQLGRLKSFSVANNLLSGSIPTFVNLTLSADS 205
+ ++ L + F G Q PP L + + + +LSG+I V S S
Sbjct: 106 FENSNFSNSNLKNASFKGSSYIQYPPILNEADLTGAIIIPGMVLSGAILGDVKELFSEKS 165
Query: 206 VTNNQGLC 213
T N G C
Sbjct: 166 NTINLGGC 173
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506
K+ DFG A + D H + +N Y APE L D++SFG VL EL T
Sbjct: 202 KLIDFGCATFKS--DYH-GSIINTR----QYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
Query: 507 G 507
G
Sbjct: 255 G 255
>pdb|4ECN|A Chain A, Crystal Structure Of A Leucine-Rich Repeat Protein
(Bt_0210) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.80 A Resolution
Length = 876
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 101 RNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160
+N +T +DL NKL D + + +L++ D+S N FS S P+ N + L + +
Sbjct: 725 KNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNXDVSYNCFS-SFPTQPLNSSQLKAFGI 783
Query: 161 DHNR 164
H R
Sbjct: 784 RHQR 787
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 428 IIHRNISSKCIL-LDDDFEP---KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
++HR++ IL +D+ P +I DFG A+ + + L T +VAPE
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY----TANFVAPEVL 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ D++S G +L ++ G P
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 428 IIHRNISSKCIL-LDDDFEP---KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYA 483
++HR++ IL +D+ P +I DFG A+ + + L T +VAPE
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY----TANFVAPEVL 197
Query: 484 RTLVATPKGDVYSFGTVLLELVTGERP 510
+ D++S G +L ++ G P
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 67 CKFTGVECWH----------PDENRVLNLRLTDMGLKGQFPRGIRN-CSSMTGLDLSSNK 115
C T VEC+ P + L+L + P G+ + +S+T L L NK
Sbjct: 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLK---SLPNGVFDELTSLTQLYLGGNK 63
Query: 116 LYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLAN-CTYLNSLKLDHNRFSGQIPPQLG 174
L LP+ + + LT L+LS+N S+P+ + + T L L L+ N+
Sbjct: 64 LQS-LPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFD 121
Query: 175 QLGRLKSFSVANNLLSGSIPTFV 197
+L +LK + N L S+P V
Sbjct: 122 KLTQLKDLRLYQNQLK-SVPDGV 143
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Query: 85 LRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGS 144
LRL LK PR + + +T L L N+L LP + + L L L +N
Sbjct: 114 LRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRV 172
Query: 145 IPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANN 187
T L +LKLD+N+ L +LK + N
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 97 PRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLN 156
P +N +T L L N L LP I LT+L +S+NN T L
Sbjct: 116 PHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174
Query: 157 SLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG-SIPTFV 197
+L+L NR + L + L +V+ NLLS +IP V
Sbjct: 175 NLQLSSNRLTH---VDLSLIPSLFHANVSYNLLSTLAIPIAV 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,988,177
Number of Sequences: 62578
Number of extensions: 749713
Number of successful extensions: 3736
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 339
Number of HSP's that attempted gapping in prelim test: 1943
Number of HSP's gapped (non-prelim): 1072
length of query: 623
length of database: 14,973,337
effective HSP length: 105
effective length of query: 518
effective length of database: 8,402,647
effective search space: 4352571146
effective search space used: 4352571146
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)