Query 006982
Match_columns 623
No_of_seqs 562 out of 4977
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 17:15:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006982.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006982hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7.7E-60 1.7E-64 558.9 38.2 472 80-590 475-955 (968)
2 KOG1187 Serine/threonine prote 100.0 3.6E-57 7.8E-62 469.8 27.4 291 291-589 61-355 (361)
3 KOG0192 Tyrosine kinase specif 100.0 6.9E-46 1.5E-50 382.5 22.5 256 310-592 46-309 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 1.5E-44 3.2E-49 371.0 17.1 253 310-589 211-464 (468)
5 KOG0581 Mitogen-activated prot 100.0 1.2E-43 2.6E-48 348.5 16.3 250 308-582 82-335 (364)
6 KOG0595 Serine/threonine-prote 100.0 4.2E-43 9.1E-48 347.3 19.1 201 304-516 9-219 (429)
7 KOG0575 Polo-like serine/threo 100.0 2.7E-43 5.9E-48 365.0 16.3 247 305-582 18-269 (592)
8 KOG0615 Serine/threonine prote 100.0 6.5E-43 1.4E-47 345.3 11.7 252 304-582 171-437 (475)
9 KOG1026 Nerve growth factor re 100.0 4.3E-42 9.3E-47 369.3 16.7 260 307-590 488-766 (774)
10 KOG0598 Ribosomal protein S6 k 100.0 2.5E-41 5.5E-46 332.1 17.9 241 304-574 24-269 (357)
11 KOG0591 NIMA (never in mitosis 100.0 1.2E-42 2.7E-47 327.1 7.0 257 306-584 20-283 (375)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 1.1E-41 2.3E-46 358.9 11.3 256 307-588 631-893 (996)
13 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.7E-39 5.9E-44 338.2 20.6 261 305-588 7-336 (338)
14 KOG0600 Cdc2-related protein k 100.0 2E-39 4.3E-44 328.2 16.1 205 304-518 116-327 (560)
15 KOG0193 Serine/threonine prote 100.0 2E-39 4.3E-44 334.5 14.4 265 298-588 385-655 (678)
16 KOG0578 p21-activated serine/t 100.0 2.1E-39 4.6E-44 333.5 12.5 197 305-513 273-471 (550)
17 KOG1095 Protein tyrosine kinas 100.0 5.9E-39 1.3E-43 357.2 16.9 258 307-589 694-964 (1025)
18 PHA02988 hypothetical protein; 100.0 5.4E-38 1.2E-42 319.8 22.3 246 310-587 25-280 (283)
19 KOG0194 Protein tyrosine kinas 100.0 5E-39 1.1E-43 335.6 14.5 260 305-592 157-426 (474)
20 KOG0661 MAPK related serine/th 100.0 1.1E-39 2.5E-44 327.7 9.3 202 304-517 9-216 (538)
21 KOG0593 Predicted protein kina 100.0 4E-39 8.7E-44 306.4 12.5 265 305-581 2-283 (396)
22 KOG0582 Ste20-like serine/thre 100.0 4.8E-38 1E-42 313.7 20.8 261 304-581 25-292 (516)
23 KOG0592 3-phosphoinositide-dep 100.0 4E-39 8.8E-44 328.5 12.8 253 303-582 71-338 (604)
24 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.2E-38 1.3E-42 314.5 21.2 251 305-583 4-255 (256)
25 cd05096 PTKc_DDR1 Catalytic do 100.0 1.4E-37 3E-42 320.3 23.2 264 305-585 5-304 (304)
26 KOG0198 MEKK and related serin 100.0 1.6E-38 3.4E-43 318.1 15.4 259 305-587 17-281 (313)
27 cd05108 PTKc_EGFR Catalytic do 100.0 8.7E-38 1.9E-42 323.6 21.5 285 305-617 7-303 (316)
28 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-37 2.6E-42 313.3 21.8 255 305-586 6-261 (261)
29 KOG2052 Activin A type IB rece 100.0 1.5E-37 3.2E-42 310.0 22.0 272 303-588 209-505 (513)
30 cd05072 PTKc_Lyn Catalytic dom 100.0 7.3E-38 1.6E-42 314.8 19.7 255 305-586 6-261 (261)
31 KOG0616 cAMP-dependent protein 100.0 1.6E-38 3.4E-43 301.9 13.2 198 305-516 44-246 (355)
32 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.5E-37 3.2E-42 313.8 20.9 254 305-586 5-265 (266)
33 cd05104 PTKc_Kit Catalytic dom 100.0 1E-37 2.2E-42 330.5 20.3 258 305-585 35-373 (375)
34 KOG4721 Serine/threonine prote 100.0 4.9E-39 1.1E-43 327.4 9.7 245 308-589 127-371 (904)
35 KOG0597 Serine-threonine prote 100.0 7.7E-38 1.7E-42 319.0 17.9 246 305-582 2-251 (808)
36 cd05052 PTKc_Abl Catalytic dom 100.0 2.4E-37 5.1E-42 311.6 21.2 255 305-586 6-262 (263)
37 cd05106 PTKc_CSF-1R Catalytic 100.0 1.2E-37 2.6E-42 329.7 19.6 260 304-586 37-372 (374)
38 KOG3653 Transforming growth fa 100.0 1.5E-37 3.3E-42 312.2 18.7 268 310-590 215-507 (534)
39 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.1E-37 4.5E-42 311.4 18.8 256 303-586 4-261 (261)
40 KOG0605 NDR and related serine 100.0 8.9E-38 1.9E-42 319.1 16.0 221 303-531 139-407 (550)
41 KOG0583 Serine/threonine prote 100.0 1E-37 2.2E-42 324.9 16.7 254 303-588 15-280 (370)
42 cd05048 PTKc_Ror Catalytic Dom 100.0 4.5E-37 9.8E-42 312.9 20.9 258 305-586 5-283 (283)
43 cd05631 STKc_GRK4 Catalytic do 100.0 4.1E-37 8.8E-42 313.8 19.8 198 307-514 2-204 (285)
44 PF07714 Pkinase_Tyr: Protein 100.0 9E-38 1.9E-42 314.1 14.7 248 310-583 4-259 (259)
45 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.1E-37 1.1E-41 308.0 20.0 252 305-584 4-256 (256)
46 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-36 2.5E-41 307.1 22.3 255 305-586 4-265 (266)
47 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.4E-37 1.8E-41 307.0 21.2 253 305-585 6-259 (260)
48 cd05059 PTKc_Tec_like Catalyti 100.0 6.9E-37 1.5E-41 307.0 20.0 250 306-583 5-255 (256)
49 cd05071 PTKc_Src Catalytic dom 100.0 1.5E-36 3.2E-41 305.7 22.5 254 305-586 6-260 (262)
50 KOG0663 Protein kinase PITSLRE 100.0 2.2E-37 4.7E-42 298.3 14.7 202 305-517 76-284 (419)
51 cd08228 STKc_Nek6 Catalytic do 100.0 2E-36 4.4E-41 305.3 22.3 260 305-587 2-266 (267)
52 cd05094 PTKc_TrkC Catalytic do 100.0 1.7E-36 3.6E-41 310.2 21.9 261 305-589 5-285 (291)
53 cd05054 PTKc_VEGFR Catalytic d 100.0 1E-36 2.2E-41 318.2 20.5 261 305-588 7-335 (337)
54 KOG4278 Protein tyrosine kinas 100.0 7.5E-38 1.6E-42 321.1 11.6 260 305-591 267-528 (1157)
55 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-36 2.4E-41 323.8 21.0 262 304-588 36-399 (400)
56 KOG0659 Cdk activating kinase 100.0 2.9E-37 6.3E-42 289.2 14.3 202 305-517 2-208 (318)
57 cd05049 PTKc_Trk Catalytic dom 100.0 1.2E-36 2.7E-41 309.1 20.1 256 305-584 5-279 (280)
58 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-36 4.5E-41 307.6 21.7 257 305-589 7-271 (279)
59 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.9E-36 4E-41 304.5 20.8 253 305-585 6-259 (260)
60 KOG0694 Serine/threonine prote 100.0 8.9E-37 1.9E-41 320.0 18.7 241 304-576 367-613 (694)
61 cd05069 PTKc_Yes Catalytic dom 100.0 3.2E-36 6.9E-41 302.8 22.2 253 305-585 6-259 (260)
62 cd05045 PTKc_RET Catalytic dom 100.0 2.3E-36 5E-41 309.0 21.5 259 306-588 1-288 (290)
63 KOG0588 Serine/threonine prote 100.0 6.2E-37 1.3E-41 318.6 17.3 246 306-583 13-264 (786)
64 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-36 4.6E-41 308.9 21.1 261 305-589 5-282 (288)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.1E-36 4.6E-41 315.6 21.5 252 305-582 1-257 (333)
66 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-36 3.6E-41 307.9 20.1 259 303-585 4-277 (277)
67 cd05043 PTK_Ryk Pseudokinase d 100.0 2.3E-36 5E-41 307.3 21.0 262 304-589 5-279 (280)
68 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-36 2.7E-41 311.4 18.8 260 304-587 11-292 (293)
69 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2E-36 4.3E-41 308.3 20.3 268 307-587 6-282 (283)
70 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-36 3.9E-41 315.8 20.4 198 305-514 5-205 (331)
71 KOG0658 Glycogen synthase kina 100.0 2.1E-37 4.6E-42 303.8 11.8 263 306-589 25-315 (364)
72 cd05090 PTKc_Ror1 Catalytic do 100.0 3.9E-36 8.5E-41 306.1 21.4 257 305-585 5-282 (283)
73 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-36 3.3E-41 315.2 18.7 192 311-513 1-197 (323)
74 cd07848 STKc_CDKL5 Catalytic d 100.0 3.7E-36 7.9E-41 306.9 21.2 200 305-514 1-204 (287)
75 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.4E-36 9.5E-41 303.1 21.5 256 305-586 5-267 (268)
76 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.1E-36 1.8E-40 300.7 23.4 260 305-587 2-266 (267)
77 cd05628 STKc_NDR1 Catalytic do 100.0 5.3E-36 1.2E-40 316.3 23.0 257 305-582 1-293 (363)
78 KOG2345 Serine/threonine prote 100.0 2.6E-37 5.6E-42 286.7 11.3 262 304-586 20-300 (302)
79 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-36 6.5E-41 307.9 20.2 200 305-515 5-208 (288)
80 cd05034 PTKc_Src_like Catalyti 100.0 5E-36 1.1E-40 301.4 21.1 254 305-585 6-260 (261)
81 cd08229 STKc_Nek7 Catalytic do 100.0 3.6E-36 7.8E-41 303.5 20.1 260 305-587 2-266 (267)
82 cd05612 STKc_PRKX_like Catalyt 100.0 8.6E-37 1.9E-41 312.4 15.8 196 305-514 1-201 (291)
83 cd05089 PTKc_Tie1 Catalytic do 100.0 4.6E-36 9.9E-41 308.0 21.0 259 305-590 2-279 (297)
84 KOG0580 Serine/threonine prote 100.0 2.5E-37 5.5E-42 285.6 10.2 248 305-583 22-274 (281)
85 cd05084 PTKc_Fes Catalytic dom 100.0 4.8E-36 1E-40 299.9 20.3 247 311-584 1-251 (252)
86 cd05035 PTKc_Axl_like Catalyti 100.0 7.3E-36 1.6E-40 302.0 21.6 256 307-586 1-272 (273)
87 PTZ00263 protein kinase A cata 100.0 6.1E-37 1.3E-41 319.0 13.9 195 305-513 18-217 (329)
88 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.4E-36 9.6E-41 304.8 19.9 257 304-584 5-276 (277)
89 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.8E-36 1.5E-40 307.7 21.4 261 304-588 14-298 (304)
90 PTZ00267 NIMA-related protein 100.0 4.1E-36 8.8E-41 327.9 20.8 252 306-581 68-322 (478)
91 cd05073 PTKc_Hck Catalytic dom 100.0 7.6E-36 1.6E-40 300.1 21.1 253 305-585 6-259 (260)
92 cd05585 STKc_YPK1_like Catalyt 100.0 2.2E-36 4.8E-41 312.5 17.5 190 313-513 1-195 (312)
93 KOG1094 Discoidin domain recep 100.0 1.1E-36 2.5E-41 311.5 15.0 263 306-587 539-805 (807)
94 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.2E-36 1.1E-40 309.0 20.1 261 305-589 18-302 (307)
95 cd06650 PKc_MEK1 Catalytic dom 100.0 9.1E-36 2E-40 310.7 22.2 198 305-514 5-205 (333)
96 cd05075 PTKc_Axl Catalytic dom 100.0 1E-35 2.2E-40 301.0 21.8 255 308-586 2-271 (272)
97 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.9E-36 1.1E-40 305.5 19.6 266 305-587 4-284 (284)
98 cd05085 PTKc_Fer Catalytic dom 100.0 1E-35 2.2E-40 297.2 21.4 246 311-584 1-249 (250)
99 cd05039 PTKc_Csk_like Catalyti 100.0 1E-35 2.2E-40 298.4 21.4 250 305-586 6-256 (256)
100 cd05088 PTKc_Tie2 Catalytic do 100.0 4.7E-36 1E-40 308.7 19.4 260 305-591 7-285 (303)
101 cd05109 PTKc_HER2 Catalytic do 100.0 9.5E-36 2.1E-40 302.6 21.3 258 305-590 7-272 (279)
102 cd05595 STKc_PKB_beta Catalyti 100.0 5.6E-36 1.2E-40 311.0 20.0 192 311-513 1-197 (323)
103 PLN00034 mitogen-activated pro 100.0 5.7E-36 1.2E-40 314.9 20.1 246 306-582 75-328 (353)
104 PRK13184 pknD serine/threonine 100.0 1.1E-35 2.3E-40 333.7 23.4 264 305-588 2-292 (932)
105 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.6E-36 1.9E-40 306.8 20.9 200 304-514 4-207 (303)
106 cd05618 STKc_aPKC_iota Catalyt 100.0 6.3E-36 1.4E-40 311.3 20.1 192 311-513 1-198 (329)
107 cd07862 STKc_CDK6 Catalytic do 100.0 3.4E-36 7.4E-41 307.6 17.8 199 306-515 2-213 (290)
108 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-35 2.3E-40 309.6 21.8 249 311-581 1-261 (329)
109 cd05593 STKc_PKB_gamma Catalyt 100.0 5.7E-36 1.2E-40 311.6 19.6 241 311-582 1-251 (328)
110 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.5E-36 1.8E-40 311.6 21.0 200 306-514 1-211 (338)
111 PTZ00283 serine/threonine prot 100.0 4.8E-36 1E-40 327.6 19.8 256 303-582 30-297 (496)
112 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-35 2.3E-40 298.1 20.6 251 305-583 4-255 (256)
113 KOG0585 Ca2+/calmodulin-depend 100.0 2.5E-36 5.4E-41 303.2 15.8 254 303-584 95-374 (576)
114 cd08529 STKc_FA2-like Catalyti 100.0 1.1E-35 2.4E-40 297.8 20.6 249 306-582 1-253 (256)
115 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-36 3.5E-41 322.3 15.3 256 306-582 2-305 (381)
116 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-35 2.6E-40 298.0 20.8 249 311-587 1-256 (257)
117 cd05091 PTKc_Ror2 Catalytic do 100.0 7.4E-36 1.6E-40 304.0 19.4 256 306-585 6-282 (283)
118 PTZ00426 cAMP-dependent protei 100.0 1.3E-36 2.9E-41 317.5 14.2 196 305-514 30-231 (340)
119 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-35 2.9E-40 297.9 20.9 247 313-586 3-255 (257)
120 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-35 2.3E-40 316.3 21.1 260 304-586 36-399 (401)
121 cd05066 PTKc_EphR_A Catalytic 100.0 1.6E-35 3.4E-40 299.0 21.2 256 305-586 4-266 (267)
122 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-35 3.4E-40 297.0 20.8 249 305-586 6-256 (256)
123 cd05055 PTKc_PDGFR Catalytic d 100.0 1.7E-35 3.6E-40 304.5 21.3 257 305-586 35-301 (302)
124 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-35 3.6E-40 297.1 20.8 246 312-585 2-254 (257)
125 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-35 3.4E-40 299.6 20.8 250 311-587 1-269 (270)
126 KOG0201 Serine/threonine prote 100.0 4.7E-37 1E-41 306.6 9.4 248 305-582 13-263 (467)
127 cd05608 STKc_GRK1 Catalytic do 100.0 7.8E-36 1.7E-40 303.5 18.6 195 313-514 1-200 (280)
128 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-35 3.4E-40 309.2 21.3 263 305-591 12-298 (334)
129 PHA03212 serine/threonine kina 100.0 2.8E-35 6.1E-40 312.8 23.0 193 305-513 92-285 (391)
130 cd05097 PTKc_DDR_like Catalyti 100.0 1.6E-35 3.4E-40 303.7 20.2 263 305-584 5-294 (295)
131 KOG1025 Epidermal growth facto 100.0 2.6E-36 5.6E-41 319.1 14.3 274 307-608 698-982 (1177)
132 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-35 2.6E-40 301.3 18.8 256 305-584 6-276 (277)
133 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-35 4.9E-40 298.1 20.6 256 306-586 5-268 (269)
134 cd05584 STKc_p70S6K Catalytic 100.0 1.4E-35 3E-40 308.1 19.4 192 311-513 2-202 (323)
135 cd05589 STKc_PKN Catalytic dom 100.0 2.3E-35 5E-40 306.6 21.1 196 307-514 1-204 (324)
136 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.8E-36 8.2E-41 315.9 15.3 203 305-514 1-233 (350)
137 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-35 2.8E-40 300.3 18.5 253 302-581 3-268 (272)
138 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.6E-35 5.6E-40 304.9 21.1 261 305-589 12-296 (314)
139 cd05058 PTKc_Met_Ron Catalytic 100.0 3.9E-35 8.5E-40 295.0 21.8 252 311-587 1-260 (262)
140 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-35 5E-40 309.0 20.7 261 305-588 7-341 (343)
141 cd05061 PTKc_InsR Catalytic do 100.0 2.7E-35 5.9E-40 300.8 20.8 260 303-586 4-278 (288)
142 cd05092 PTKc_TrkA Catalytic do 100.0 2.4E-35 5.2E-40 300.0 20.2 256 305-584 5-279 (280)
143 cd05599 STKc_NDR_like Catalyti 100.0 1.9E-35 4.2E-40 312.3 20.3 203 305-514 1-242 (364)
144 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-36 5.6E-41 318.9 13.5 203 301-514 39-250 (370)
145 cd00192 PTKc Catalytic domain 100.0 3.9E-35 8.5E-40 294.2 21.1 250 311-584 1-262 (262)
146 cd05051 PTKc_DDR Catalytic dom 100.0 4.9E-35 1.1E-39 299.9 22.0 263 305-584 5-295 (296)
147 cd05629 STKc_NDR_like_fungal C 100.0 3.9E-36 8.5E-41 319.0 14.2 203 305-514 1-251 (377)
148 cd05605 STKc_GRK4_like Catalyt 100.0 2.6E-35 5.7E-40 300.5 19.7 199 306-514 1-204 (285)
149 cd06654 STKc_PAK1 Catalytic do 100.0 4E-35 8.7E-40 300.8 20.9 249 305-582 20-270 (296)
150 cd05596 STKc_ROCK Catalytic do 100.0 1.7E-35 3.7E-40 312.9 18.6 201 303-514 41-250 (370)
151 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.6E-35 5.7E-40 299.7 19.4 265 305-587 4-284 (284)
152 cd05050 PTKc_Musk Catalytic do 100.0 2.9E-35 6.2E-40 300.5 19.7 258 304-585 4-288 (288)
153 cd05095 PTKc_DDR2 Catalytic do 100.0 4.4E-35 9.6E-40 300.4 21.1 264 305-585 5-296 (296)
154 cd05594 STKc_PKB_alpha Catalyt 100.0 1.3E-35 2.9E-40 308.5 17.4 192 311-513 1-198 (325)
155 PTZ00036 glycogen synthase kin 100.0 1.5E-35 3.2E-40 319.9 18.0 200 304-515 65-275 (440)
156 cd05040 PTKc_Ack_like Catalyti 100.0 4.6E-35 9.9E-40 293.7 20.3 249 311-584 1-256 (257)
157 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-35 4.2E-40 306.7 18.0 193 311-514 1-199 (321)
158 cd05057 PTKc_EGFR_like Catalyt 100.0 6.7E-35 1.5E-39 296.4 21.5 257 305-589 7-271 (279)
159 cd05590 STKc_nPKC_eta Catalyti 100.0 2.1E-35 4.5E-40 306.3 18.0 193 311-514 1-199 (320)
160 cd05110 PTKc_HER4 Catalytic do 100.0 4.7E-35 1E-39 301.3 20.5 258 305-590 7-272 (303)
161 cd05614 STKc_MSK2_N N-terminal 100.0 2.7E-35 5.8E-40 307.2 18.8 199 306-514 1-210 (332)
162 cd05042 PTKc_Aatyk Catalytic d 100.0 3.2E-35 6.9E-40 297.1 18.7 253 312-584 2-268 (269)
163 KOG0589 Serine/threonine prote 100.0 4.8E-36 1E-40 307.5 12.6 251 305-583 4-259 (426)
164 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-35 3.9E-40 307.4 17.2 198 306-514 1-204 (324)
165 cd05625 STKc_LATS1 Catalytic d 100.0 1.5E-35 3.3E-40 315.1 17.0 202 306-514 2-251 (382)
166 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-35 3.2E-40 308.9 16.3 201 305-514 1-212 (330)
167 cd06639 STKc_myosinIIIB Cataly 100.0 3.3E-35 7.1E-40 300.6 18.5 264 295-582 12-287 (291)
168 cd05044 PTKc_c-ros Catalytic d 100.0 3.3E-35 7.1E-40 296.8 18.3 251 311-585 1-269 (269)
169 cd05597 STKc_DMPK_like Catalyt 100.0 9.9E-35 2.1E-39 302.7 22.2 256 305-582 1-266 (331)
170 cd05619 STKc_nPKC_theta Cataly 100.0 1.4E-35 3.1E-40 306.9 15.7 192 311-513 1-198 (316)
171 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7E-35 1.5E-39 297.1 20.4 263 306-586 5-283 (284)
172 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-34 2.7E-39 292.8 22.0 253 312-584 2-268 (269)
173 cd05582 STKc_RSK_N N-terminal 100.0 7.3E-36 1.6E-40 309.5 13.2 192 311-513 2-200 (318)
174 cd05598 STKc_LATS Catalytic do 100.0 3.7E-35 8.1E-40 311.5 18.9 203 305-514 1-247 (376)
175 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-34 2.3E-39 291.9 21.3 252 305-582 2-260 (263)
176 cd06612 STKc_MST1_2 Catalytic 100.0 8E-35 1.7E-39 291.5 20.3 248 305-581 3-252 (256)
177 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-35 9.2E-40 303.4 18.8 193 311-514 1-199 (316)
178 cd05607 STKc_GRK7 Catalytic do 100.0 4.1E-35 9E-40 297.7 18.1 246 313-583 1-251 (277)
179 KOG1989 ARK protein kinase fam 100.0 2.8E-35 6.1E-40 318.4 17.7 258 306-591 38-316 (738)
180 cd05620 STKc_nPKC_delta Cataly 100.0 4.5E-35 9.8E-40 303.2 18.6 193 311-514 1-199 (316)
181 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-34 2.3E-39 293.4 20.8 256 305-589 6-268 (270)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-34 2.3E-39 295.0 21.0 249 306-582 2-253 (279)
183 cd05617 STKc_aPKC_zeta Catalyt 100.0 8.2E-35 1.8E-39 302.8 20.6 193 311-514 1-199 (327)
184 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.9E-35 1.1E-39 297.1 18.4 246 306-582 5-253 (277)
185 cd06646 STKc_MAP4K5 Catalytic 100.0 7.6E-35 1.6E-39 293.9 19.6 252 305-583 9-266 (267)
186 cd05622 STKc_ROCK1 Catalytic d 100.0 1.3E-35 2.8E-40 313.8 14.5 207 297-514 35-250 (371)
187 cd05616 STKc_cPKC_beta Catalyt 100.0 6.3E-35 1.4E-39 303.2 19.3 197 306-513 1-203 (323)
188 cd06638 STKc_myosinIIIA Cataly 100.0 3.7E-35 8E-40 299.3 17.2 261 298-582 11-283 (286)
189 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-34 3E-39 292.0 21.2 250 305-581 2-260 (266)
190 KOG0660 Mitogen-activated prot 100.0 4.8E-35 1E-39 286.8 17.0 279 305-599 22-325 (359)
191 cd05575 STKc_SGK Catalytic dom 100.0 3.6E-35 7.9E-40 305.0 17.3 192 311-513 1-198 (323)
192 cd07853 STKc_NLK Catalytic dom 100.0 1.6E-34 3.5E-39 306.1 22.2 199 306-515 1-209 (372)
193 cd08528 STKc_Nek10 Catalytic d 100.0 9.1E-35 2E-39 293.6 19.3 254 306-584 1-268 (269)
194 cd05570 STKc_PKC Catalytic dom 100.0 8.2E-35 1.8E-39 301.6 19.2 192 311-513 1-198 (318)
195 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.8E-35 1E-39 293.6 16.9 238 311-584 1-259 (259)
196 cd06615 PKc_MEK Catalytic doma 100.0 2E-34 4.3E-39 297.4 21.9 197 305-513 1-200 (308)
197 cd08219 STKc_Nek3 Catalytic do 100.0 1.2E-34 2.6E-39 290.4 19.7 249 306-582 1-252 (255)
198 cd06624 STKc_ASK Catalytic dom 100.0 1.5E-34 3.3E-39 291.9 20.6 254 301-581 4-264 (268)
199 PHA03207 serine/threonine kina 100.0 2E-34 4.3E-39 307.3 22.4 197 305-515 92-291 (392)
200 cd05083 PTKc_Chk Catalytic dom 100.0 1.2E-34 2.7E-39 290.2 19.5 247 305-585 6-253 (254)
201 PF00069 Pkinase: Protein kina 100.0 4E-35 8.7E-40 294.2 15.7 251 307-581 1-256 (260)
202 cd05041 PTKc_Fes_like Catalyti 100.0 2.1E-34 4.6E-39 287.8 20.8 247 311-584 1-250 (251)
203 PHA03211 serine/threonine kina 100.0 2.6E-34 5.6E-39 309.4 22.8 195 305-513 169-364 (461)
204 KOG0594 Protein kinase PCTAIRE 100.0 3.4E-35 7.3E-40 289.0 14.5 204 305-516 11-226 (323)
205 cd05604 STKc_SGK3 Catalytic do 100.0 4.9E-35 1.1E-39 304.2 16.6 193 311-514 1-199 (325)
206 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-34 2.8E-39 295.4 19.3 198 307-514 2-204 (285)
207 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.4E-34 3E-39 294.9 19.6 258 305-584 5-268 (284)
208 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.9E-34 4.1E-39 297.7 20.8 200 305-515 6-209 (309)
209 cd06656 STKc_PAK3 Catalytic do 100.0 1.8E-34 3.9E-39 296.1 20.4 248 305-581 19-268 (297)
210 KOG0611 Predicted serine/threo 100.0 8.2E-36 1.8E-40 293.1 9.8 247 305-584 53-305 (668)
211 cd05632 STKc_GRK5 Catalytic do 100.0 1.4E-34 3E-39 295.1 19.3 197 307-513 2-203 (285)
212 cd08221 STKc_Nek9 Catalytic do 100.0 2.7E-34 5.7E-39 288.0 20.9 249 306-582 1-253 (256)
213 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-34 4.1E-39 292.2 20.0 246 306-581 2-250 (274)
214 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.4E-34 7.3E-39 288.6 21.5 238 311-583 1-261 (262)
215 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.6E-35 1.7E-39 295.3 16.9 237 312-583 2-273 (274)
216 cd08217 STKc_Nek2 Catalytic do 100.0 2E-34 4.3E-39 289.7 19.9 254 306-582 1-262 (265)
217 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-34 3.5E-39 300.0 19.7 198 306-514 1-204 (323)
218 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.8E-34 8.2E-39 289.2 21.7 253 312-584 2-267 (268)
219 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-34 2.9E-39 294.6 18.4 260 295-581 6-278 (282)
220 cd05602 STKc_SGK1 Catalytic do 100.0 2.7E-35 5.8E-40 306.2 13.5 192 311-513 1-198 (325)
221 cd05603 STKc_SGK2 Catalytic do 100.0 8.6E-35 1.9E-39 301.9 17.1 192 311-513 1-198 (321)
222 cd05074 PTKc_Tyro3 Catalytic d 100.0 3E-34 6.6E-39 290.4 20.7 256 307-586 1-272 (273)
223 cd06655 STKc_PAK2 Catalytic do 100.0 2.8E-34 6E-39 294.5 20.3 248 305-581 19-268 (296)
224 cd06640 STKc_MST4 Catalytic do 100.0 5.2E-34 1.1E-38 289.6 22.0 246 306-582 5-253 (277)
225 cd08223 STKc_Nek4 Catalytic do 100.0 3.7E-34 8.1E-39 286.9 20.6 249 306-582 1-254 (257)
226 PHA03209 serine/threonine kina 100.0 4.1E-34 9E-39 301.0 21.8 193 303-512 64-257 (357)
227 cd06631 STKc_YSK4 Catalytic do 100.0 4.1E-34 8.8E-39 288.2 20.7 252 306-581 1-261 (265)
228 cd05623 STKc_MRCK_alpha Cataly 100.0 3.6E-34 7.8E-39 298.6 20.8 256 305-582 1-266 (332)
229 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.7E-34 1.4E-38 289.8 22.4 200 305-515 1-205 (286)
230 cd05046 PTK_CCK4 Pseudokinase 100.0 3.2E-34 7E-39 290.6 19.8 256 305-584 5-274 (275)
231 cd07861 STKc_CDK1_euk Catalyti 100.0 2.2E-34 4.7E-39 293.3 18.6 200 306-514 1-205 (285)
232 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-34 6.7E-39 287.5 19.3 248 306-581 1-252 (256)
233 cd07863 STKc_CDK4 Catalytic do 100.0 1.6E-34 3.5E-39 294.9 17.5 198 306-514 1-210 (288)
234 smart00219 TyrKc Tyrosine kina 100.0 4.9E-34 1.1E-38 285.9 20.7 249 308-583 2-258 (258)
235 cd07876 STKc_JNK2 Catalytic do 100.0 4.7E-34 1E-38 301.1 21.5 196 304-514 20-225 (359)
236 cd07875 STKc_JNK1 Catalytic do 100.0 4.6E-34 9.9E-39 301.8 21.3 197 304-515 23-229 (364)
237 cd06608 STKc_myosinIII_like Ca 100.0 8.2E-35 1.8E-39 294.4 14.8 255 303-581 4-271 (275)
238 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.7E-34 1.2E-38 290.9 21.2 259 306-581 2-265 (287)
239 KOG0199 ACK and related non-re 100.0 4.2E-35 9.1E-40 305.2 12.7 245 310-583 115-369 (1039)
240 cd08227 PK_STRAD_alpha Pseudok 100.0 2E-34 4.4E-39 299.9 17.8 200 310-514 3-213 (327)
241 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-34 3.4E-39 290.3 16.2 239 311-584 1-258 (258)
242 cd06626 STKc_MEKK4 Catalytic d 100.0 9.3E-34 2E-38 285.1 22.0 252 306-581 1-260 (264)
243 cd05627 STKc_NDR2 Catalytic do 100.0 3.3E-34 7.2E-39 302.3 19.1 203 305-514 1-239 (360)
244 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-33 2.3E-38 293.1 22.5 199 310-514 6-219 (317)
245 cd06645 STKc_MAP4K3 Catalytic 100.0 6.6E-34 1.4E-38 287.0 20.4 250 305-581 9-264 (267)
246 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5E-34 1.1E-38 293.4 19.6 200 305-515 6-209 (301)
247 PTZ00266 NIMA-related protein 100.0 2.1E-34 4.6E-39 324.5 18.2 262 303-588 11-303 (1021)
248 cd06630 STKc_MEKK1 Catalytic d 100.0 7.2E-34 1.6E-38 286.7 20.3 254 306-581 1-263 (268)
249 cd07874 STKc_JNK3 Catalytic do 100.0 3.6E-34 7.7E-39 301.6 18.8 197 303-514 15-221 (355)
250 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-33 2.6E-38 290.0 21.9 198 306-514 1-206 (298)
251 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-33 2.3E-38 285.5 21.1 249 307-581 2-263 (267)
252 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.4E-34 1.4E-38 290.2 19.8 252 306-582 2-262 (286)
253 cd06643 STKc_SLK Catalytic dom 100.0 1E-33 2.2E-38 288.2 21.2 249 307-582 7-262 (282)
254 cd05574 STKc_phototropin_like 100.0 9.5E-34 2.1E-38 293.4 21.3 204 306-514 2-235 (316)
255 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.2E-34 9E-39 291.4 18.3 199 305-514 1-204 (286)
256 KOG0610 Putative serine/threon 100.0 2.1E-34 4.6E-39 285.6 15.3 209 306-519 78-343 (459)
257 cd06613 STKc_MAP4K3_like Catal 100.0 1.7E-33 3.8E-38 282.8 22.0 252 305-581 3-259 (262)
258 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-33 2.5E-38 285.0 20.7 201 305-513 2-211 (265)
259 cd07867 STKc_CDC2L6 Catalytic 100.0 2E-33 4.4E-38 291.0 23.0 199 310-514 6-219 (317)
260 cd06644 STKc_STK10_LOK Catalyt 100.0 2.1E-33 4.5E-38 287.5 22.7 250 305-581 12-268 (292)
261 KOG4257 Focal adhesion tyrosin 100.0 2.2E-34 4.8E-39 296.3 15.4 254 306-588 390-651 (974)
262 cd05624 STKc_MRCK_beta Catalyt 100.0 8.1E-34 1.7E-38 295.8 19.8 201 305-514 1-211 (331)
263 PTZ00284 protein kinase; Provi 100.0 5.1E-34 1.1E-38 311.1 19.1 201 301-515 125-349 (467)
264 cd08220 STKc_Nek8 Catalytic do 100.0 1.5E-33 3.3E-38 282.2 21.0 247 306-581 1-252 (256)
265 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-33 3.2E-38 282.5 20.6 246 306-581 1-254 (258)
266 KOG0033 Ca2+/calmodulin-depend 100.0 5.5E-36 1.2E-40 276.9 2.4 250 304-581 10-266 (355)
267 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.7E-34 1.9E-38 285.7 18.7 259 305-581 1-263 (267)
268 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-33 2.6E-38 287.3 19.6 250 305-582 5-262 (280)
269 cd06641 STKc_MST3 Catalytic do 100.0 2.5E-33 5.5E-38 284.5 21.4 246 306-582 5-253 (277)
270 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-33 3E-38 287.1 19.4 252 305-581 1-260 (283)
271 cd05586 STKc_Sck1_like Catalyt 100.0 2.9E-34 6.2E-39 299.2 14.3 190 313-513 1-199 (330)
272 KOG0986 G protein-coupled rece 100.0 2.1E-34 4.5E-39 287.5 12.6 200 304-513 184-388 (591)
273 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.1E-33 4.5E-38 294.3 20.7 196 303-514 13-219 (343)
274 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.4E-33 5.2E-38 283.7 20.4 254 306-582 2-269 (272)
275 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-33 2.5E-38 287.9 18.2 199 306-514 1-204 (284)
276 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-33 2.4E-38 284.8 17.8 252 306-582 2-257 (265)
277 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.9E-33 6.2E-38 286.2 21.0 201 303-514 3-207 (291)
278 cd06917 STKc_NAK1_like Catalyt 100.0 2.6E-33 5.5E-38 284.3 20.4 247 306-582 2-255 (277)
279 cd08225 STKc_Nek5 Catalytic do 100.0 1.6E-33 3.5E-38 282.3 18.6 248 306-581 1-253 (257)
280 cd07844 STKc_PCTAIRE_like Cata 100.0 2.6E-33 5.6E-38 286.5 20.6 199 305-514 5-207 (291)
281 cd06658 STKc_PAK5 Catalytic do 100.0 9.8E-34 2.1E-38 289.9 17.4 243 310-582 27-272 (292)
282 cd06647 STKc_PAK_I Catalytic d 100.0 2.4E-33 5.2E-38 287.2 20.2 249 305-582 19-269 (293)
283 cd07839 STKc_CDK5 Catalytic do 100.0 7.7E-34 1.7E-38 289.3 16.3 197 306-513 1-202 (284)
284 cd06659 STKc_PAK6 Catalytic do 100.0 2.2E-33 4.7E-38 288.1 19.5 244 309-582 25-271 (297)
285 KOG0032 Ca2+/calmodulin-depend 100.0 2E-33 4.3E-38 292.6 19.0 249 305-582 35-293 (382)
286 cd06623 PKc_MAPKK_plant_like C 100.0 4.1E-33 9E-38 280.3 20.5 251 306-582 2-256 (264)
287 cd06614 STKc_PAK Catalytic dom 100.0 3.3E-33 7.2E-38 285.0 19.8 253 303-582 17-270 (286)
288 KOG4279 Serine/threonine prote 100.0 3.1E-34 6.7E-39 298.0 12.1 242 312-581 582-831 (1226)
289 KOG0584 Serine/threonine prote 100.0 9.2E-35 2E-39 302.2 8.2 196 310-517 45-249 (632)
290 cd05609 STKc_MAST Catalytic do 100.0 6.6E-33 1.4E-37 285.6 21.7 256 306-585 2-273 (305)
291 KOG0599 Phosphorylase kinase g 100.0 4.3E-34 9.4E-39 268.1 11.4 198 304-513 16-230 (411)
292 cd08530 STKc_CNK2-like Catalyt 100.0 3.4E-33 7.3E-38 279.6 18.6 248 306-581 1-252 (256)
293 cd07833 STKc_CDKL Catalytic do 100.0 7.5E-33 1.6E-37 282.4 21.3 199 306-514 2-205 (288)
294 cd07832 STKc_CCRK Catalytic do 100.0 7E-33 1.5E-37 282.3 21.0 199 306-514 1-204 (286)
295 cd05122 PKc_STE Catalytic doma 100.0 9.8E-33 2.1E-37 274.9 21.3 248 306-581 1-250 (253)
296 cd07842 STKc_CDK8_like Catalyt 100.0 9.5E-33 2.1E-37 285.6 21.8 206 306-516 1-221 (316)
297 cd06648 STKc_PAK_II Catalytic 100.0 8E-33 1.7E-37 282.1 20.6 245 307-581 21-268 (285)
298 cd06607 STKc_TAO Catalytic dom 100.0 9.7E-33 2.1E-37 284.7 21.1 246 305-583 15-268 (307)
299 cd06606 STKc_MAPKKK Catalytic 100.0 1.3E-32 2.8E-37 275.2 21.3 250 306-581 1-256 (260)
300 cd07843 STKc_CDC2L1 Catalytic 100.0 4.3E-33 9.2E-38 285.2 18.0 200 305-515 5-211 (293)
301 cd07840 STKc_CDK9_like Catalyt 100.0 1E-32 2.2E-37 281.0 20.6 199 307-515 1-206 (287)
302 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-32 2.8E-37 285.0 21.7 249 307-588 27-283 (317)
303 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-32 3.2E-37 279.6 21.8 198 307-514 1-203 (283)
304 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-32 2.7E-37 282.0 21.3 202 305-514 1-215 (295)
305 PHA02882 putative serine/threo 100.0 2.2E-32 4.8E-37 280.2 23.1 258 305-583 12-293 (294)
306 PHA03210 serine/threonine kina 100.0 3.8E-33 8.2E-38 305.7 18.4 202 304-512 147-369 (501)
307 KOG0667 Dual-specificity tyros 100.0 8.4E-34 1.8E-38 297.9 12.5 198 306-516 187-393 (586)
308 cd07849 STKc_ERK1_2_like Catal 100.0 9.2E-33 2E-37 288.6 20.2 200 304-513 4-212 (336)
309 cd07865 STKc_CDK9 Catalytic do 100.0 1.5E-32 3.3E-37 283.2 21.4 203 305-514 12-227 (310)
310 cd05580 STKc_PKA Catalytic dom 100.0 2.7E-32 5.9E-37 278.9 22.5 196 305-514 1-201 (290)
311 cd07836 STKc_Pho85 Catalytic d 100.0 1.1E-32 2.3E-37 280.7 19.4 202 306-516 1-206 (284)
312 KOG0577 Serine/threonine prote 100.0 3.5E-34 7.5E-39 293.3 8.2 192 307-513 28-227 (948)
313 cd07855 STKc_ERK5 Catalytic do 100.0 8.3E-33 1.8E-37 288.7 18.7 202 305-514 5-215 (334)
314 cd08215 STKc_Nek Catalytic dom 100.0 1.8E-32 3.8E-37 274.3 20.1 250 306-581 1-254 (258)
315 cd05578 STKc_Yank1 Catalytic d 100.0 6.4E-33 1.4E-37 278.3 16.9 197 306-514 1-202 (258)
316 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-32 2.3E-37 280.6 18.5 263 307-581 1-279 (283)
317 cd07831 STKc_MOK Catalytic dom 100.0 3.2E-32 6.9E-37 276.8 21.4 196 307-515 1-203 (282)
318 KOG0200 Fibroblast/platelet-de 100.0 1.1E-32 2.4E-37 306.7 19.4 259 307-587 298-580 (609)
319 cd05633 STKc_GRK3 Catalytic do 100.0 1.6E-32 3.6E-37 278.9 19.0 241 312-582 1-255 (279)
320 cd07850 STKc_JNK Catalytic dom 100.0 1E-32 2.2E-37 290.2 18.0 197 303-514 14-220 (353)
321 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-32 3.1E-37 284.2 18.6 198 311-514 8-213 (314)
322 PLN00009 cyclin-dependent kina 100.0 9.9E-33 2.1E-37 282.7 16.9 200 305-514 2-207 (294)
323 cd06616 PKc_MKK4 Catalytic dom 100.0 8.7E-33 1.9E-37 282.2 16.4 252 306-582 5-267 (288)
324 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-32 6.1E-37 274.3 19.6 190 313-514 1-195 (262)
325 cd06627 STKc_Cdc7_like Catalyt 100.0 4.8E-32 1E-36 270.8 20.5 246 306-581 1-250 (254)
326 cd07838 STKc_CDK4_6_like Catal 100.0 2.9E-32 6.3E-37 277.8 19.0 197 307-514 1-209 (287)
327 cd07879 STKc_p38delta_MAPK13 C 100.0 8.9E-32 1.9E-36 281.8 22.7 194 304-514 14-218 (342)
328 cd08222 STKc_Nek11 Catalytic d 100.0 2E-32 4.3E-37 275.1 17.0 249 306-581 1-256 (260)
329 cd07845 STKc_CDK10 Catalytic d 100.0 4.2E-32 9E-37 280.2 19.8 201 304-515 6-213 (309)
330 cd07852 STKc_MAPK15 Catalytic 100.0 7.7E-32 1.7E-36 281.7 22.0 203 304-515 6-217 (337)
331 cd08226 PK_STRAD_beta Pseudoki 100.0 3.2E-32 7E-37 283.5 19.0 199 311-514 4-213 (328)
332 cd06618 PKc_MKK7 Catalytic dom 100.0 3.5E-32 7.6E-37 279.0 18.9 251 305-582 15-273 (296)
333 cd06657 STKc_PAK4 Catalytic do 100.0 4E-32 8.7E-37 277.9 19.2 242 310-581 25-269 (292)
334 cd06653 STKc_MEKK3_like_1 Cata 100.0 7E-32 1.5E-36 271.9 20.7 201 305-513 2-211 (264)
335 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-32 4.7E-37 274.9 16.6 247 313-584 1-256 (265)
336 PHA03390 pk1 serine/threonine- 100.0 1.7E-31 3.7E-36 269.7 23.1 198 298-514 7-209 (267)
337 cd07857 STKc_MPK1 Catalytic do 100.0 2.3E-31 5E-36 277.6 24.4 201 306-514 1-213 (332)
338 cd06634 STKc_TAO2 Catalytic do 100.0 7.6E-32 1.6E-36 278.1 19.7 249 306-587 16-272 (308)
339 cd05583 STKc_MSK_N N-terminal 100.0 7.3E-32 1.6E-36 275.4 19.3 254 306-585 1-266 (288)
340 cd05577 STKc_GRK Catalytic dom 100.0 8.8E-32 1.9E-36 273.2 19.7 192 313-514 1-197 (277)
341 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-31 2.7E-36 278.9 20.7 199 300-514 5-209 (328)
342 KOG0574 STE20-like serine/thre 100.0 2.2E-34 4.9E-39 273.1 -0.0 199 306-515 34-233 (502)
343 KOG1024 Receptor-like protein 100.0 2.7E-32 6E-37 267.6 14.4 269 296-588 275-557 (563)
344 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-31 3.4E-36 271.6 20.5 190 312-514 1-199 (278)
345 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-31 3.1E-36 273.6 20.1 198 306-513 1-210 (290)
346 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.8E-31 3.9E-36 278.9 21.2 198 305-514 5-212 (337)
347 cd06633 STKc_TAO3 Catalytic do 100.0 2.7E-31 5.9E-36 274.7 22.1 243 307-582 23-273 (313)
348 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.3E-31 7.2E-36 277.5 22.9 196 303-514 13-219 (343)
349 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-31 3.9E-36 274.3 20.5 203 302-514 4-221 (302)
350 KOG4717 Serine/threonine prote 100.0 1.6E-32 3.4E-37 277.1 12.0 245 306-582 19-270 (864)
351 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-31 5.5E-36 270.3 20.7 198 307-515 1-203 (283)
352 cd07829 STKc_CDK_like Catalyti 100.0 6.3E-32 1.4E-36 274.5 16.2 198 307-515 1-203 (282)
353 KOG4250 TANK binding protein k 100.0 1.5E-32 3.2E-37 289.1 11.7 201 307-516 15-229 (732)
354 KOG0586 Serine/threonine prote 100.0 2.9E-32 6.2E-37 283.4 13.6 201 304-516 55-260 (596)
355 KOG0607 MAP kinase-interacting 100.0 5.6E-32 1.2E-36 259.1 14.4 269 295-581 73-360 (463)
356 KOG1035 eIF-2alpha kinase GCN2 100.0 2.1E-32 4.6E-37 301.7 13.1 253 301-581 475-870 (1351)
357 KOG0596 Dual specificity; seri 100.0 3.8E-32 8.3E-37 277.5 14.0 250 305-581 361-626 (677)
358 cd05611 STKc_Rim15_like Cataly 100.0 1.6E-31 3.6E-36 268.4 18.2 243 311-584 2-250 (260)
359 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.4E-31 1.6E-35 275.1 23.4 202 297-514 9-221 (345)
360 cd05581 STKc_PDK1 Catalytic do 100.0 1E-31 2.2E-36 272.6 15.6 203 305-514 1-225 (280)
361 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.2E-31 4.8E-36 278.8 18.5 201 305-515 5-223 (342)
362 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-31 2.9E-36 276.3 16.7 205 304-515 7-231 (311)
363 PTZ00024 cyclin-dependent prot 100.0 2.9E-31 6.4E-36 277.1 19.3 203 305-515 8-238 (335)
364 KOG0690 Serine/threonine prote 100.0 2.6E-32 5.5E-37 261.8 10.2 199 305-514 168-371 (516)
365 cd07834 STKc_MAPK Catalytic do 100.0 3.3E-31 7.1E-36 276.1 19.3 201 306-515 1-211 (330)
366 KOG4645 MAPKKK (MAP kinase kin 100.0 5.5E-33 1.2E-37 307.6 4.9 203 304-513 1234-1443(1509)
367 cd07851 STKc_p38 Catalytic dom 100.0 3.1E-31 6.8E-36 277.8 17.9 195 304-514 14-219 (343)
368 KOG0612 Rho-associated, coiled 100.0 1.2E-32 2.7E-37 301.2 6.4 214 297-520 67-290 (1317)
369 KOG0579 Ste20-like serine/thre 100.0 3.4E-32 7.3E-37 280.2 8.5 248 307-581 34-288 (1187)
370 KOG0983 Mitogen-activated prot 100.0 2.4E-31 5.1E-36 250.0 11.8 246 309-582 96-349 (391)
371 cd05610 STKc_MASTL Catalytic d 100.0 1.4E-30 3.1E-35 294.2 20.3 144 305-455 4-152 (669)
372 cd05123 STKc_AGC Catalytic dom 100.0 1.5E-30 3.3E-35 259.5 18.3 190 313-513 1-195 (250)
373 KOG0604 MAP kinase-activated p 100.0 2.7E-31 5.9E-36 252.6 9.9 253 304-582 60-322 (400)
374 KOG0666 Cyclin C-dependent kin 100.0 3E-31 6.5E-36 253.4 10.0 205 305-514 24-243 (438)
375 cd05576 STKc_RPK118_like Catal 100.0 6.4E-30 1.4E-34 253.4 16.2 180 316-513 4-184 (237)
376 KOG0587 Traf2- and Nck-interac 100.0 7.8E-30 1.7E-34 273.5 17.4 209 298-515 12-232 (953)
377 PLN03224 probable serine/threo 100.0 2E-29 4.2E-34 271.3 20.6 266 303-582 143-500 (507)
378 KOG0603 Ribosomal protein S6 k 100.0 2.1E-30 4.5E-35 271.0 12.4 240 304-582 321-563 (612)
379 KOG0669 Cyclin T-dependent kin 100.0 3.2E-31 7E-36 246.3 4.3 267 305-583 17-316 (376)
380 smart00220 S_TKc Serine/Threon 100.0 3E-29 6.5E-34 247.9 18.6 236 317-581 1-240 (244)
381 KOG0696 Serine/threonine prote 100.0 2.5E-30 5.4E-35 255.1 9.1 202 305-517 349-556 (683)
382 KOG4236 Serine/threonine prote 100.0 2.1E-30 4.5E-35 262.4 8.1 194 310-514 569-769 (888)
383 PLN03225 Serine/threonine-prot 100.0 6.9E-29 1.5E-33 273.7 20.1 201 303-512 130-380 (566)
384 KOG0608 Warts/lats-like serine 100.0 2.1E-29 4.6E-34 260.0 14.1 208 305-519 629-879 (1034)
385 KOG1006 Mitogen-activated prot 100.0 4.9E-31 1.1E-35 247.0 1.1 251 310-582 69-327 (361)
386 KOG0662 Cyclin-dependent kinas 100.0 1.6E-29 3.4E-34 223.7 10.5 198 306-514 3-206 (292)
387 KOG0984 Mitogen-activated prot 100.0 4.2E-30 9E-35 232.5 7.0 203 307-517 48-258 (282)
388 KOG1151 Tousled-like protein k 100.0 4.9E-30 1.1E-34 254.9 7.3 204 306-514 464-687 (775)
389 KOG0614 cGMP-dependent protein 100.0 7.5E-30 1.6E-34 257.7 5.5 198 307-516 422-624 (732)
390 KOG1027 Serine/threonine prote 100.0 7.9E-30 1.7E-34 272.2 5.7 249 306-581 510-766 (903)
391 KOG0671 LAMMER dual specificit 100.0 3.9E-29 8.4E-34 246.0 9.8 202 304-518 88-316 (415)
392 KOG0695 Serine/threonine prote 100.0 4.9E-28 1.1E-32 233.1 12.3 199 305-514 250-454 (593)
393 cd00180 PKc Catalytic domain o 99.9 1.5E-26 3.3E-31 222.8 20.0 209 313-582 1-214 (215)
394 KOG1152 Signal transduction se 99.9 1.4E-27 3E-32 245.0 10.2 197 304-513 560-771 (772)
395 smart00221 STYKc Protein kinas 99.9 2.7E-26 5.9E-31 224.5 18.6 198 307-513 1-202 (225)
396 KOG1345 Serine/threonine kinas 99.9 3.2E-27 7E-32 222.0 10.7 260 305-591 24-293 (378)
397 KOG0664 Nemo-like MAPK-related 99.9 9.8E-28 2.1E-32 225.3 3.7 198 308-516 56-263 (449)
398 KOG0668 Casein kinase II, alph 99.9 8.4E-26 1.8E-30 207.5 11.3 194 304-514 37-236 (338)
399 PLN00181 protein SPA1-RELATED; 99.9 4.6E-25 9.9E-30 255.3 10.1 199 356-582 28-265 (793)
400 KOG1290 Serine/threonine prote 99.9 7E-24 1.5E-28 214.4 17.3 131 305-440 78-221 (590)
401 KOG0576 Mitogen-activated prot 99.9 2E-25 4.2E-30 232.9 5.9 248 305-580 15-269 (829)
402 KOG0665 Jun-N-terminal kinase 99.9 6.5E-25 1.4E-29 211.5 8.8 193 306-514 18-220 (369)
403 KOG0195 Integrin-linked kinase 99.9 1.1E-24 2.4E-29 204.9 6.8 246 311-587 196-447 (448)
404 smart00750 KIND kinase non-cat 99.9 1.9E-23 4.2E-28 196.9 13.9 168 385-588 1-171 (176)
405 KOG0670 U4/U6-associated splic 99.9 1.4E-24 3E-29 220.3 4.9 209 295-516 424-640 (752)
406 PLN03150 hypothetical protein; 99.9 1.3E-22 2.7E-27 226.6 16.4 184 29-241 368-555 (623)
407 PRK09188 serine/threonine prot 99.9 1.6E-22 3.6E-27 209.0 15.4 168 302-486 15-195 (365)
408 KOG1167 Serine/threonine prote 99.9 2.1E-23 4.6E-28 208.4 6.9 203 302-515 33-282 (418)
409 PLN00113 leucine-rich repeat r 99.9 1.1E-21 2.4E-26 233.2 17.0 158 29-195 25-182 (968)
410 KOG1164 Casein kinase (serine/ 99.9 2.2E-20 4.8E-25 193.5 20.2 264 306-590 19-301 (322)
411 COG0515 SPS1 Serine/threonine 99.8 1.5E-19 3.3E-24 186.1 20.3 202 307-514 2-214 (384)
412 KOG1023 Natriuretic peptide re 99.8 8.3E-21 1.8E-25 199.6 10.1 247 354-617 1-256 (484)
413 KOG1165 Casein kinase (serine/ 99.8 2.1E-19 4.5E-24 174.2 17.9 269 306-594 29-307 (449)
414 KOG0590 Checkpoint kinase and 99.8 4.6E-21 1E-25 211.1 6.3 254 309-581 322-584 (601)
415 cd05147 RIO1_euk RIO kinase fa 99.8 5.5E-20 1.2E-24 174.9 11.0 139 310-458 2-168 (190)
416 cd05145 RIO1_like RIO kinase f 99.8 2.5E-19 5.4E-24 171.0 13.8 139 310-459 2-169 (190)
417 KOG1240 Protein kinase contain 99.8 3.8E-20 8.3E-25 203.2 7.9 197 306-512 24-240 (1431)
418 PRK10359 lipopolysaccharide co 99.8 7.1E-20 1.5E-24 176.2 8.3 169 304-505 30-216 (232)
419 KOG1163 Casein kinase (serine/ 99.8 8.7E-20 1.9E-24 169.4 8.4 204 305-516 15-226 (341)
420 PRK12274 serine/threonine prot 99.8 8E-19 1.7E-23 165.3 13.6 188 308-514 5-210 (218)
421 PF14531 Kinase-like: Kinase-l 99.7 1.3E-17 2.9E-22 165.3 12.4 197 307-514 14-253 (288)
422 PRK10345 hypothetical protein; 99.7 2.8E-17 6E-22 157.9 13.2 136 308-455 5-157 (210)
423 KOG1166 Mitotic checkpoint ser 99.7 5.8E-18 1.3E-22 190.0 9.6 198 301-509 694-901 (974)
424 KOG0603 Ribosomal protein S6 k 99.7 1.7E-18 3.8E-23 182.0 1.0 185 312-513 1-193 (612)
425 smart00090 RIO RIO-like kinase 99.7 7.2E-17 1.6E-21 158.8 12.2 141 306-458 29-199 (237)
426 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-16 2.6E-21 153.6 12.9 143 300-459 10-177 (198)
427 PRK14879 serine/threonine prot 99.7 1.2E-16 2.5E-21 155.3 12.3 133 311-456 2-143 (211)
428 PRK09605 bifunctional UGMP fam 99.7 1.9E-16 4.1E-21 175.2 13.8 137 305-457 333-477 (535)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 2.6E-16 5.6E-21 151.4 11.2 129 312-456 1-138 (199)
430 KOG4158 BRPK/PTEN-induced prot 99.7 7.1E-16 1.5E-20 153.1 12.0 146 358-513 274-459 (598)
431 KOG0606 Microtubule-associated 99.6 3.4E-16 7.4E-21 172.5 6.8 175 305-522 83-269 (1205)
432 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.3E-16 2.9E-21 164.8 1.9 126 374-506 330-457 (516)
433 cd05120 APH_ChoK_like Aminogly 99.6 8.3E-15 1.8E-19 133.6 11.6 135 310-457 3-139 (155)
434 cd05119 RIO RIO kinase family, 99.6 3.7E-15 7.9E-20 141.9 9.0 135 310-458 2-165 (187)
435 PRK01723 3-deoxy-D-manno-octul 99.5 4.7E-14 1E-18 139.1 13.1 134 310-456 36-191 (239)
436 KOG1266 Protein kinase [Signal 99.5 1.3E-14 2.8E-19 141.1 5.9 162 349-512 116-283 (458)
437 PLN03150 hypothetical protein; 99.5 6.8E-14 1.5E-18 156.7 8.0 93 105-198 419-511 (623)
438 TIGR01982 UbiB 2-polyprenylphe 99.4 1.1E-12 2.3E-17 140.6 11.6 144 306-459 119-309 (437)
439 KOG0590 Checkpoint kinase and 99.4 1.5E-13 3.2E-18 151.9 2.0 204 306-516 21-235 (601)
440 cd05151 ChoK Choline Kinase (C 99.3 1.4E-11 2.9E-16 115.2 9.8 130 311-456 4-136 (170)
441 KOG0617 Ras suppressor protein 99.3 5.4E-13 1.2E-17 118.3 -0.5 113 79-195 32-145 (264)
442 PRK04750 ubiB putative ubiquin 99.2 5.6E-12 1.2E-16 136.6 5.9 146 304-459 119-316 (537)
443 KOG0601 Cyclin-dependent kinas 99.2 5.1E-11 1.1E-15 126.1 7.4 200 306-513 115-329 (524)
444 KOG0617 Ras suppressor protein 99.1 2.9E-12 6.2E-17 113.7 -1.9 113 81-197 80-193 (264)
445 KOG0472 Leucine-rich repeat pr 99.1 2E-11 4.3E-16 121.9 3.2 109 82-196 390-545 (565)
446 cd05154 ACAD10_11_like Acyl-Co 99.1 5.5E-10 1.2E-14 109.1 12.0 141 311-456 4-206 (223)
447 KOG0472 Leucine-rich repeat pr 99.1 3.6E-12 7.9E-17 127.1 -3.8 112 94-210 196-308 (565)
448 KOG1243 Protein kinase [Genera 99.1 6.8E-10 1.5E-14 118.7 12.1 165 326-507 34-199 (690)
449 cd05146 RIO3_euk RIO kinase fa 99.1 1.2E-09 2.6E-14 103.2 12.3 136 310-458 2-175 (197)
450 COG3642 Mn2+-dependent serine/ 99.1 1.4E-09 3E-14 99.2 11.0 130 311-456 2-140 (204)
451 KOG0444 Cytoskeletal regulator 99.0 1.3E-10 2.9E-15 121.7 0.8 80 82-164 105-184 (1255)
452 KOG0444 Cytoskeletal regulator 98.9 1.3E-10 2.8E-15 121.9 -1.4 106 81-190 79-186 (1255)
453 KOG3087 Serine/threonine prote 98.9 1.6E-08 3.5E-13 91.8 11.5 142 309-456 11-165 (229)
454 KOG0601 Cyclin-dependent kinas 98.9 1.1E-09 2.3E-14 116.2 4.7 195 302-510 262-465 (524)
455 PRK15370 E3 ubiquitin-protein 98.9 1.9E-08 4.1E-13 113.9 14.1 156 23-196 53-280 (754)
456 COG4248 Uncharacterized protei 98.8 1.6E-07 3.5E-12 95.3 17.7 267 310-590 16-304 (637)
457 KOG4194 Membrane glycoprotein 98.8 3.1E-10 6.6E-15 118.4 -1.7 114 81-195 270-383 (873)
458 KOG0618 Serine/threonine phosp 98.8 4.1E-10 9E-15 123.4 -1.7 127 81-211 360-488 (1081)
459 PRK15123 lipopolysaccharide co 98.8 1E-07 2.3E-12 95.2 14.6 140 311-456 28-194 (268)
460 PF08263 LRRNT_2: Leucine rich 98.8 6.6E-09 1.4E-13 72.6 3.9 41 32-75 2-43 (43)
461 PF01163 RIO1: RIO1 family; I 98.8 3.7E-08 8.1E-13 92.7 10.2 125 320-458 1-157 (188)
462 PRK15387 E3 ubiquitin-protein 98.8 4.7E-09 1E-13 118.2 4.2 56 131-195 384-439 (788)
463 PF14580 LRR_9: Leucine-rich r 98.8 5.2E-09 1.1E-13 97.0 3.6 104 81-190 20-126 (175)
464 PRK15370 E3 ubiquitin-protein 98.7 1.6E-08 3.5E-13 114.4 7.4 99 80-191 199-297 (754)
465 KOG3741 Poly(A) ribonuclease s 98.7 1.1E-07 2.4E-12 98.9 12.4 169 318-510 289-475 (655)
466 KOG0532 Leucine-rich repeat (L 98.7 2.3E-09 5E-14 111.9 -1.8 111 95-210 112-222 (722)
467 KOG0606 Microtubule-associated 98.7 7.2E-09 1.6E-13 115.6 1.8 208 303-517 802-1041(1205)
468 KOG4194 Membrane glycoprotein 98.7 8.9E-09 1.9E-13 107.8 2.2 110 79-190 124-234 (873)
469 PRK15387 E3 ubiquitin-protein 98.6 8E-08 1.7E-12 108.4 9.2 37 81-122 223-259 (788)
470 PF13855 LRR_8: Leucine rich r 98.6 1.6E-08 3.4E-13 77.0 2.4 57 131-188 3-60 (61)
471 PF13855 LRR_8: Leucine rich r 98.6 1.7E-08 3.6E-13 76.8 2.0 61 104-165 1-61 (61)
472 KOG4237 Extracellular matrix p 98.6 1.4E-08 3.1E-13 101.7 0.8 144 72-217 51-206 (498)
473 KOG0618 Serine/threonine phosp 98.5 1.8E-08 3.9E-13 110.9 -0.7 104 80-188 383-487 (1081)
474 COG0478 RIO-like serine/threon 98.5 1.2E-06 2.6E-11 85.0 11.5 134 307-456 93-251 (304)
475 PF14580 LRR_9: Leucine-rich r 98.5 7.1E-08 1.5E-12 89.4 2.6 88 99-191 14-102 (175)
476 KOG2137 Protein kinase [Signal 98.4 7.6E-08 1.6E-12 103.7 1.7 98 411-510 106-208 (700)
477 KOG0532 Leucine-rich repeat (L 98.4 4.8E-08 1E-12 102.3 -0.4 103 82-190 145-247 (722)
478 PLN03210 Resistant to P. syrin 98.4 8.8E-07 1.9E-11 106.9 10.0 111 82-197 591-701 (1153)
479 PLN03210 Resistant to P. syrin 98.4 7.3E-07 1.6E-11 107.6 9.1 113 80-196 611-723 (1153)
480 PF06293 Kdo: Lipopolysacchari 98.4 2.1E-06 4.6E-11 82.8 10.4 107 344-457 55-171 (206)
481 PRK09902 hypothetical protein; 98.3 9.3E-06 2E-10 77.1 13.5 138 313-456 26-179 (216)
482 cd00116 LRR_RI Leucine-rich re 98.3 9E-08 2E-12 99.0 -1.8 114 79-192 80-208 (319)
483 cd00116 LRR_RI Leucine-rich re 98.3 1.6E-07 3.5E-12 97.1 -0.5 111 80-191 108-235 (319)
484 KOG1259 Nischarin, modulator o 98.2 3.4E-07 7.3E-12 88.8 1.1 106 81-193 308-415 (490)
485 COG0661 AarF Predicted unusual 98.2 4.9E-06 1.1E-10 90.2 10.0 145 305-459 126-317 (517)
486 KOG4579 Leucine-rich repeat (L 98.2 1.7E-07 3.7E-12 80.8 -1.2 109 82-195 29-140 (177)
487 KOG4579 Leucine-rich repeat (L 98.2 1.8E-07 4E-12 80.6 -1.1 113 79-195 52-164 (177)
488 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 2E-05 4.3E-10 77.1 12.4 139 311-456 7-182 (226)
489 KOG1259 Nischarin, modulator o 98.1 3.9E-07 8.6E-12 88.3 -0.3 90 94-188 274-363 (490)
490 COG4886 Leucine-rich repeat (L 98.1 1.4E-06 3E-11 93.1 2.8 107 84-195 97-203 (394)
491 PF12799 LRR_4: Leucine Rich r 98.0 2.1E-06 4.5E-11 60.1 1.7 35 131-166 3-37 (44)
492 COG1718 RIO1 Serine/threonine 98.0 6.9E-05 1.5E-09 72.3 12.3 153 294-458 34-217 (268)
493 cd05150 APH Aminoglycoside 3'- 98.0 4.7E-05 1E-09 75.6 11.4 141 313-456 6-193 (244)
494 PF06176 WaaY: Lipopolysacchar 98.0 7.3E-05 1.6E-09 71.3 11.9 136 304-456 30-183 (229)
495 COG4886 Leucine-rich repeat (L 98.0 2.6E-06 5.6E-11 91.1 2.3 104 81-189 117-221 (394)
496 KOG4237 Extracellular matrix p 98.0 1.4E-06 3.1E-11 87.7 0.0 89 100-189 270-358 (498)
497 KOG4658 Apoptotic ATPase [Sign 98.0 3.3E-06 7E-11 97.5 2.6 105 81-187 546-652 (889)
498 PF12260 PIP49_C: Protein-kina 97.9 3.9E-05 8.5E-10 72.5 8.5 105 348-457 7-112 (188)
499 PF01636 APH: Phosphotransfera 97.9 7.3E-05 1.6E-09 73.2 10.7 145 310-456 2-197 (239)
500 PF12799 LRR_4: Leucine Rich r 97.9 5.9E-06 1.3E-10 57.8 1.5 37 153-190 1-37 (44)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.7e-60 Score=558.93 Aligned_cols=472 Identities=31% Similarity=0.553 Sum_probs=358.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..+..|+|++|+++|.+|..+.++++|+.|+|++|.+.|.+|..+.++.+ |++|+|++|+++|.+|..++++++|+.|+
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKK-LVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccC-CCEEECCCCcccccCChhHhCcccCCEEE
Confidence 46889999999999999999999999999999999999999999999755 99999999999999999999999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcccc-ccccccccCCCCCCCCCCC----CCCCCCCCCCCccceee
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFVN-LTLSADSVTNNQGLCGEPL----DACKGTSKGPHTGVIAG 234 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~l~~~~~----~~c~~~~~~~~~~~i~~ 234 (623)
|++|+++|.+|..+.++++|+.|++++|+++|.+|.... ..+....+.+|+.+|+.+. ++|...........+++
T Consensus 554 Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~ 633 (968)
T PLN00113 554 LSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYIT 633 (968)
T ss_pred CCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehh
Confidence 999999999999999999999999999999999997533 2566778999999998653 45643222111112222
Q ss_pred ehhhhHHHHHHHHHHhheeeeeeecccccCCCCCCCcccccccCCCCCceeeeee-ccccccCHHHHHHHhccCccccee
Q 006982 235 AAIGGVTFAALVVGIVMFFYFRRMSMRKKKDDDPEGNKWAKSLTGTKGIKVSLFE-KSITKMRLSDLMKATNSFSKNNII 313 (623)
Q Consensus 235 ~~i~~v~~~~l~~~i~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~f~~~~~l 313 (623)
+++++ ++++++++++ ++++++++..+..........|. ...+. .....++++++. ..|...++|
T Consensus 634 ~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~~~i 698 (968)
T PLN00113 634 CTLGA-FLVLALVAFG-FVFIRGRNNLELKRVENEDGTWE----------LQFFDSKVSKSITINDIL---SSLKEENVI 698 (968)
T ss_pred HHHHH-HHHHHHHHHH-HHHHHhhhccccccccccccccc----------ccccccccchhhhHHHHH---hhCCcccEE
Confidence 22211 1111111211 22222211111111000111111 11111 111223444443 457778899
Q ss_pred eccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhcc
Q 006982 314 GSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLH 392 (623)
Q Consensus 314 G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~ 392 (623)
|+|+||.||+|+. .++..||+|++...... ...|++.+++++|||||+++++|.+.+..++||||+++|+|.++++
T Consensus 699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~ 775 (968)
T PLN00113 699 SRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR 775 (968)
T ss_pred ccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh
Confidence 9999999999996 57899999998654322 2356889999999999999999999999999999999999999994
Q ss_pred CCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCC
Q 006982 393 PADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEF 472 (623)
Q Consensus 393 ~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~ 472 (623)
.++|.++.+++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||........ ....
T Consensus 776 -------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--------~~~~ 839 (968)
T PLN00113 776 -------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--------TKCF 839 (968)
T ss_pred -------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--------CCcc
Confidence 38999999999999999999998777799999999999999999998875 6655433211 1124
Q ss_pred CcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcC--CC
Q 006982 473 GDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK--GV 550 (623)
Q Consensus 473 gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~--~~ 550 (623)
+|++|+|||++.+..++.++|||||||++|||+||+.||+... .....+.+|.............+|+.+... ..
T Consensus 840 ~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (968)
T PLN00113 840 ISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF---GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN 916 (968)
T ss_pred ccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc---CCCCcHHHHHHHhcCccchhheeCccccCCCCcc
Confidence 7899999999999999999999999999999999999995422 223457778776655555666677766432 24
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 551 ~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.+++.++.+++.+|+. .+|++||+|+||++.|+++....
T Consensus 917 ~~~~~~~~~l~~~Cl~-~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 917 QNEIVEVMNLALHCTA-TDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHHHHHHHhhCc-CCchhCcCHHHHHHHHHHhhccc
Confidence 5677788999999998 99999999999999999986543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-57 Score=469.80 Aligned_cols=291 Identities=47% Similarity=0.763 Sum_probs=255.4
Q ss_pred cccccCHHHHHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEecccccc-HHHHHHHHHHhCCCCCCCCcceeEEE
Q 006982 291 SITKMRLSDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS-EKEFVAEMATLGSVKNRNLVPLLGFC 369 (623)
Q Consensus 291 ~~~~~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~ 369 (623)
....|++.++..||++|+..++||+|+||.||+|.+.+|+.||||++...... .++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45578999999999999999999999999999999999999999988776544 67799999999999999999999999
Q ss_pred EeCC-eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 370 MAKK-ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 370 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
.+.+ +.+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||+.+.|+|+||||||+|||+|+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998 599999999999999999875543 8999999999999999999999999999999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
+|||+|+.......+..... .||.+|+||||...+..+.|+|||||||+|+|++||+.|.+.... .....+..|+
T Consensus 219 sDFGLa~~~~~~~~~~~~~~---~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~--~~~~~l~~w~ 293 (361)
T KOG1187|consen 219 SDFGLAKLGPEGDTSVSTTV---MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP--RGELSLVEWA 293 (361)
T ss_pred cCccCcccCCccccceeeec---CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC--cccccHHHHH
Confidence 99999976543122211110 589999999999999999999999999999999999998875442 2233489999
Q ss_pred HHHhccCchhhhhchhhh-cCCCH-HHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 529 AQLSSTGQLQDAIDKCLV-AKGVD-NELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~-~~~~~-~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
........+.+++|+.+. ..... +++.+++++|+.|+. .+|++||+|.||+++|+.+...
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~-~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLR-PDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcC-cCCCcCcCHHHHHHHHHhhccc
Confidence 988888899999999987 44443 789999999999999 8899999999999999776543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-46 Score=382.55 Aligned_cols=256 Identities=33% Similarity=0.475 Sum_probs=204.2
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEecccccc---HHHHHHHHHHhCCCCCCCCcceeEEEEeCC-eeeEEEecCCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLGFCMAKK-ERLLVYKHMPNG 385 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~~~g 385 (623)
.+.||+|+||+||+|.+.....||+|++...... .+.|.+|+.+|.+++|||||+++|+|.+.. ..++||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4569999999999999985555999999865433 558999999999999999999999999887 789999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC-cEecCCCCCceeeCCCC-CeEEeecccccccCCCCCc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR-IIHRNISSKCILLDDDF-EPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-i~H~dlk~~NILl~~~~-~~kl~Dfgla~~~~~~~~~ 463 (623)
+|.++++.. ....+++..+++++.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++......
T Consensus 126 sL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 126 SLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred cHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 999999864 346899999999999999999999999 6 99999999999999997 99999999998765421
Q ss_pred ccccccCCCCcccccCccccc--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 464 LSTFVNGEFGDLGYVAPEYAR--TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~--~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
.......||+.|||||++. ...|+.|+|||||||++|||+||+.||...... . ....+ ........+
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~----~~~~v---~~~~~Rp~~- 267 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-Q----VASAV---VVGGLRPPI- 267 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-H----HHHHH---HhcCCCCCC-
Confidence 1111245999999999999 669999999999999999999999999864331 0 11111 101000000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCC
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHF 592 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~ 592 (623)
.......+..+++ .|+. .||+.||++.+++..|+.+......
T Consensus 268 -----p~~~~~~l~~l~~---~CW~-~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 268 -----PKECPPHLSSLME---RCWL-VDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred -----CccCCHHHHHHHH---HhCC-CCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 0113344444444 4777 9999999999999999998776553
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=371.04 Aligned_cols=253 Identities=30% Similarity=0.470 Sum_probs=210.6
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhh
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD 389 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 389 (623)
.+.||+|.||.||.|.+.....||+|.++......+.|.+|+++|++++|+|||+++|+|...+..+||||||+.|+|.+
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~ 290 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLD 290 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHH
Confidence 56899999999999999988899999999888888999999999999999999999999999889999999999999999
Q ss_pred hccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccccc
Q 006982 390 LLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVN 469 (623)
Q Consensus 390 ~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 469 (623)
+|... .+..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+......+.. ..
T Consensus 291 yLr~~--~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~---~~ 362 (468)
T KOG0197|consen 291 YLRTR--EGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA---SE 362 (468)
T ss_pred Hhhhc--CCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceee---cC
Confidence 99762 357789999999999999999999999 99999999999999999999999999999554332221 22
Q ss_pred CCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcC
Q 006982 470 GEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK 548 (623)
Q Consensus 470 ~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 548 (623)
+..-+..|.|||.+....++.|||||||||+||||+| |+.||..... .+.+....+..++ -..+
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--------~ev~~~le~GyRl-------p~P~ 427 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--------EEVLELLERGYRL-------PRPE 427 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------HHHHHHHhccCcC-------CCCC
Confidence 2334678999999999999999999999999999999 8888865322 2223333222221 1233
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 549 GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 549 ~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.+++++.++ ...|+. .+|++|||++.+...|+++...
T Consensus 428 ~CP~~vY~l---M~~CW~-~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 428 GCPDEVYEL---MKSCWH-EDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCHHHHHH---HHHHhh-CCcccCCCHHHHHHHHHHhhhc
Confidence 456666664 446776 8999999999999999988654
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=348.53 Aligned_cols=250 Identities=27% Similarity=0.406 Sum_probs=198.0
Q ss_pred cccceeeccCccEEEEEEeC-CCcEEEEEEecc--ccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-eeeEEEecCC
Q 006982 308 SKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQD--SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK-ERLLVYKHMP 383 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~~~ 383 (623)
+..+.||+|..|+|||+.++ +++.+|+|.+.. .....+++.+|++++.+.+||+||.++|.|+.+. +..++||||.
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 34578999999999999976 678899999943 3445678999999999999999999999999998 5999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|||++++... +.+++...-+|+.+|.+||.|||+.. +|+||||||+|||++..|++||+|||.++.+...
T Consensus 162 gGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 162 GGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred CCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 99999999633 56899999999999999999999732 8999999999999999999999999999987542
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
..++-+||..|||||.+.+..|+.++||||||+.++|+.+|+.||..... ......+.+.....+. -+
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~---~~~~~~~Ll~~Iv~~p------pP 300 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP---PYLDIFELLCAIVDEP------PP 300 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC---CCCCHHHHHHHHhcCC------CC
Confidence 33455699999999999999999999999999999999999999975411 1111222211111110 01
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+......+++..++ .||.+.||.+||+++|+++.
T Consensus 301 ~lP~~~fS~ef~~FV----~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 301 RLPEGEFSPEFRSFV----SCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCcccCCHHHHHHH----HHHhcCCcccCCCHHHHhcC
Confidence 111112334444443 34445999999999998764
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-43 Score=347.32 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=177.7
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
..+|...+.||+|+|++||+|+++ ++.+||||.+.... ...+....|+.+|+.++|||||.+++++++++..++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356777888999999999999965 68999999996553 34556789999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC------CCeEEeeccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD------FEPKISDFGL 453 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~------~~~kl~Dfgl 453 (623)
|||.||+|.++++.. ..+++.....++.|+|.||++||++ +|+||||||+|||++.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~~----~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR----GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 999999999999743 4689999999999999999999999 99999999999999764 4689999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
|+.+.+.. ...+.+|++-|||||++...+|+.|+|+||.|+|+|++++|+.||+..+.
T Consensus 162 AR~L~~~~-----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 162 ARFLQPGS-----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred hhhCCchh-----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 99987532 22334599999999999999999999999999999999999999985433
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-43 Score=365.02 Aligned_cols=247 Identities=23% Similarity=0.394 Sum_probs=205.3
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecc----ccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQD----SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
..|...+.||+|||..+|.++. ..|..||+|++.+ .....+...+||++.++++|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999996 7899999999976 3455677899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
|+|++|+|.++++ ..++++++++..+..||+.||.|||+. +|+|||||-.|++++++.++||+|||+|..+..
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999996 347899999999999999999999999 999999999999999999999999999999875
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.+....+. +|||-|+|||++.....+..+||||+|||+|-|++|++||......+.+. .... .+
T Consensus 171 ~~Erk~Tl----CGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~--------~Ik~----~~ 234 (592)
T KOG0575|consen 171 DGERKKTL----CGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYN--------KIKL----NE 234 (592)
T ss_pred ccccccee----cCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHH--------HHHh----cC
Confidence 54433343 49999999999998889999999999999999999999998643322211 1000 01
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
..- ......+..+++.-.+. .+|.+|||+++|+..
T Consensus 235 Y~~----P~~ls~~A~dLI~~lL~----~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 235 YSM----PSHLSAEAKDLIRKLLR----PNPSERPSLDEVLDH 269 (592)
T ss_pred ccc----ccccCHHHHHHHHHHhc----CCcccCCCHHHHhcC
Confidence 111 11234455555554443 899999999999864
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-43 Score=345.28 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=195.2
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccc--------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQR--------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
.+.|...+.||+|+||.|-+|. .++|+.||||++.+... ......+|+++|.+++|||||++++++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3457778999999999999998 56899999999975421 12235799999999999999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC---CCeEEeec
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD---FEPKISDF 451 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~---~~~kl~Df 451 (623)
.|+|+||++||+|.+++- ..+.+.+.....++.|++.|+.|||++ ||+||||||+|||+..+ ..+||+||
T Consensus 251 ~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred eEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEeccc
Confidence 999999999999999985 345678888899999999999999999 99999999999999765 78999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV---ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
|+|+.... ..++.+.+||+.|.|||++.+.. +..++|+||+|||||-+++|..||....... .+.+-+
T Consensus 324 GlAK~~g~-----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~----sl~eQI 394 (475)
T KOG0615|consen 324 GLAKVSGE-----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP----SLKEQI 394 (475)
T ss_pred chhhcccc-----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc----cHHHHH
Confidence 99998753 34556667999999999997654 3348899999999999999999998643321 122111
Q ss_pred HHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+... .+- .+......++...+++-.+ ..||++|||++|+++.
T Consensus 395 ~~G~y------~f~-p~~w~~Iseea~dlI~~mL----~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 395 LKGRY------AFG-PLQWDRISEEALDLINWML----VVDPENRPSADEALNH 437 (475)
T ss_pred hcCcc------ccc-ChhhhhhhHHHHHHHHHhh----EeCcccCcCHHHHhcC
Confidence 11000 000 0011123444555544333 3889999999998764
No 9
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.3e-42 Score=369.29 Aligned_cols=260 Identities=26% Similarity=0.425 Sum_probs=209.3
Q ss_pred CcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 307 FSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
....+.||+|.||.||+|.. ++.+.||||.+++.. ....+|++|++.++.++|||||+++|+|.+++..++|
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~Mv 567 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMV 567 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEE
Confidence 33456799999999999984 245679999998754 3578899999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCC------C----CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 379 YKHMPNGSLYDLLHPADD------T----GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~------~----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
+|||..|||.++|..... . ..+++..+.+.||.|||.||.||-++ .++||||..+|+||.++..+||
T Consensus 568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEe
Confidence 999999999999953221 1 23488999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~ 527 (623)
+|||+++.+...+++... ....-+.+|||||.+..+++|.+||||||||+|||+++ |+.||.+....+
T Consensus 645 sDfGLsRdiYssDYYk~~--~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E--------- 713 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVR--GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE--------- 713 (774)
T ss_pred cccccchhhhhhhhhccc--CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH---------
Confidence 999999987765554321 12234689999999999999999999999999999998 999998654422
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
+-..++.+.+... .+..+.++.++ .+.|+. .+|++||+++||...|+...+..
T Consensus 714 VIe~i~~g~lL~~------Pe~CP~~vY~L---M~~CW~-~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 714 VIECIRAGQLLSC------PENCPTEVYSL---MLECWN-ENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HHHHHHcCCcccC------CCCCCHHHHHH---HHHHhh-cCcccCCCHHHHHHHHHHHHhcC
Confidence 1222223332221 22344444444 457887 89999999999999999876543
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=332.09 Aligned_cols=241 Identities=22% Similarity=0.275 Sum_probs=197.0
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.++|+..++||+|+||.||.++.+ +++.+|+|++++.. ...+...+|..+|.+++||+||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 357899999999999999999965 58889999997753 3456788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+.||.|+.+|+ ....+++..+.-++.+|+.||.|||+. +|+||||||+|||+|++|+++|+|||+++..-
T Consensus 104 ld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 99999999999996 345789998999999999999999999 99999999999999999999999999999643
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..+... ++-+||+.|||||++....|+..+|.||+|+++|||++|.+||...+. .++........
T Consensus 177 ~~~~~t----~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--------~~~~~~I~~~k--- 241 (357)
T KOG0598|consen 177 KDGDAT----RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--------KKMYDKILKGK--- 241 (357)
T ss_pred cCCCcc----ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--------HHHHHHHhcCc---
Confidence 332222 234599999999999999999999999999999999999999986432 33333332221
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP 574 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP 574 (623)
..........+..++++-.+. .||++|-
T Consensus 242 ----~~~~p~~ls~~ardll~~LL~----rdp~~RL 269 (357)
T KOG0598|consen 242 ----LPLPPGYLSEEARDLLKKLLK----RDPRQRL 269 (357)
T ss_pred ----CCCCCccCCHHHHHHHHHHhc----cCHHHhc
Confidence 000112245566666665544 7899995
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=327.14 Aligned_cols=257 Identities=22% Similarity=0.354 Sum_probs=201.1
Q ss_pred cCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEE-EEeCCe-eeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGF-CMAKKE-RLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~~-~~lV~ 379 (623)
+|.+.++||+|.||+|||+. ..+|..+|.|.++-.. ...+.+..|+.+|++++|||||+++++ +.++.+ .++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 47778899999999999998 5689999999987533 445678899999999999999999984 444555 78999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP-RIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~-~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
||+..|+|...++......+.+++...++++.|+++||.++|+..+. .|.||||||.||++|++|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999999987666678899999999999999999999994322 38999999999999999999999999999986
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.... +....+|||.||+||.+....|+.||||||+||++|||..-..||.+.. +.+....... ++.
T Consensus 180 s~~t----fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--------~~~L~~KI~q-gd~- 245 (375)
T KOG0591|consen 180 SKTT----FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--------LLSLCKKIEQ-GDY- 245 (375)
T ss_pred chhH----HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--------HHHHHHHHHc-CCC-
Confidence 5432 3344569999999999999999999999999999999999999998641 1111111111 100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
+.+..+..++++..++ -.|.. .||+.||+...++..+.
T Consensus 246 ----~~~p~~~YS~~l~~li---~~ci~-vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 246 ----PPLPDEHYSTDLRELI---NMCIA-VDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ----CCCcHHHhhhHHHHHH---HHHcc-CCcccCCCcchHHHHHH
Confidence 0011122344444444 45666 89999998655444443
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=358.87 Aligned_cols=256 Identities=23% Similarity=0.372 Sum_probs=209.5
Q ss_pred CcccceeeccCccEEEEEEeC----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 307 FSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
..+.++||.|.||.||+|.++ ....||+|.++... ....+|+.|..+|.++.||||++|.|+.......+||+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 345689999999999999965 24569999999764 456789999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
||+||+|+.+|.... ..+++.+..-++.+||.||.||-+. +++||||.++||||+.+..+||+|||+++.+...
T Consensus 711 yMENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 711 YMENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 999999999997654 4599999999999999999999998 9999999999999999999999999999987543
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
. .......+..-+.+|.|||.+...++|.++||||||||+||.++ |.+||-+.... +.+.
T Consensus 785 ~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--------dVIk---------- 845 (996)
T KOG0196|consen 785 P-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVIK---------- 845 (996)
T ss_pred C-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--------HHHH----------
Confidence 3 22222222224689999999999999999999999999999887 99998653221 1111
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.+++-.+-..+.+.-..+-++++.|++ .|-.+||.+++++..|+++..
T Consensus 846 aIe~gyRLPpPmDCP~aL~qLMldCWq-kdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 846 AIEQGYRLPPPMDCPAALYQLMLDCWQ-KDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHH-HHhhcCCCHHHHHHHHHHHhc
Confidence 122222222234455667778889988 999999999999999998543
No 13
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.7e-39 Score=338.18 Aligned_cols=261 Identities=25% Similarity=0.396 Sum_probs=199.0
Q ss_pred ccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCC-e
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKK-E 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~ 374 (623)
++|...+.||+|+||.||+|.. .++..||+|+++... .....+.+|++++.++ +||||+++++++...+ .
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 5688889999999999999974 235679999987543 2345788999999999 8999999999887654 5
Q ss_pred eeEEEecCCCCCHhhhccCCCCC---------------------------------------------------------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDT--------------------------------------------------------- 397 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 397 (623)
.++||||+++|+|.+++......
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 78999999999999998643210
Q ss_pred -CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCccc
Q 006982 398 -GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLG 476 (623)
Q Consensus 398 -~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~ 476 (623)
...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........ .......++..
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~~~ 241 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKGSARLPLK 241 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch--hcccCCCCCcc
Confidence 13478889999999999999999999 9999999999999999999999999999865432111 11112235688
Q ss_pred ccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHH
Q 006982 477 YVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELF 555 (623)
Q Consensus 477 y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 555 (623)
|+|||++.+..++.++|||||||++|||++ |..||......+ ....... .+.... ......+
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-------~~~~~~~-~~~~~~------~~~~~~~--- 304 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-------EFCQRLK-DGTRMR------APENATP--- 304 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-------HHHHHHh-cCCCCC------CCCCCCH---
Confidence 999999998899999999999999999997 999997532211 1111111 111000 0011222
Q ss_pred HHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 556 QFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 556 ~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.+..++..|+. .||++|||+.|+++.|+++..
T Consensus 305 ~l~~li~~cl~-~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 305 EIYRIMLACWQ-GDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHcc-CChhhCcCHHHHHHHHHHHHh
Confidence 34556667877 999999999999999998754
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-39 Score=328.23 Aligned_cols=205 Identities=27% Similarity=0.379 Sum_probs=177.4
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 377 (623)
.+.|+..+.||+|.||.||+|+ ..+|+.||+|++.... ....-..+||.+|+++.||||+++.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3567888999999999999999 5689999999996543 3456678999999999999999999999877 68999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+|||+. +|.-++.. .+-.|+..++..++.|++.||+|+|++ +|.|||||.+|||||.+|.+||+|||+|+++
T Consensus 196 VFeYMdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeec
Confidence 9999987 99988853 345799999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~ 518 (623)
....... ...++-|.+|+|||++.+ ..|+.++|+||.||||.||++|+..|.+.+..+
T Consensus 269 ~~~~~~~---~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve 327 (560)
T KOG0600|consen 269 TPSGSAP---YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE 327 (560)
T ss_pred cCCCCcc---cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH
Confidence 6643321 233457999999999876 479999999999999999999999998765433
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=334.53 Aligned_cols=265 Identities=26% Similarity=0.417 Sum_probs=203.8
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
.++....+.+.....||+|.||+||+|.|. -.||||+++... ...+.|.+|+.++++-||.||+-++|||..+..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 444444556677889999999999999986 368999997543 345789999999999999999999999998877
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.||+.+|+|-+|+.++|..+ ..|+..+.+.||.|+|+||.|||.+ +|||||||+.||++.+++.|||+|||++
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred -eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccce
Confidence 99999999999999999654 5799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART---LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
..-..- ..........|..-|||||++.. .+|+..+||||||+|+|||++|..||.. ...+.. + | +
T Consensus 536 tvk~~w--~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqI---i--f---m 604 (678)
T KOG0193|consen 536 TVKTRW--SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQI---I--F---M 604 (678)
T ss_pred eeeeee--ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhhe---E--E---E
Confidence 753211 00111122337788999999964 4689999999999999999999999983 222111 0 0 0
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
+..+. -..|..........++.+ ++..|+. .++++||.+.+++..|+++..
T Consensus 605 VGrG~--l~pd~s~~~s~~pk~mk~---Ll~~C~~-~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 605 VGRGY--LMPDLSKIRSNCPKAMKR---LLSDCWK-FDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ecccc--cCccchhhhccCHHHHHH---HHHHHHh-cCcccCccHHHHHHHHHHhhh
Confidence 00000 011111111223444444 4456877 999999999999999988765
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=333.54 Aligned_cols=197 Identities=27% Similarity=0.414 Sum_probs=177.4
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccccc-HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS-EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
..|.....||+|+.|.||.|. ..+++.||+|++....+. .+-..+|+.+|+..+|+|||++++.|...++.|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 356777889999999999998 567899999999876554 445789999999999999999999999899999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+.+. ...+++.+...|+.++++||+|||.+ +|+|||||.+|||++.++.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt-----~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 353 EGGSLTDVVT-----KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred CCCchhhhhh-----cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 9999999983 45699999999999999999999999 999999999999999999999999999998876544
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
... +.+||+.|||||+.....|..|+||||+|++++||+-|..||-.
T Consensus 425 KR~----TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln 471 (550)
T KOG0578|consen 425 KRS----TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN 471 (550)
T ss_pred ccc----cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC
Confidence 332 34599999999999999999999999999999999999999975
No 17
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=357.17 Aligned_cols=258 Identities=25% Similarity=0.452 Sum_probs=205.5
Q ss_pred CcccceeeccCccEEEEEEeCC--Cc----EEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 307 FSKNNIIGSGRTGTMYKALLED--GT----SLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
....+.||+|.||.||.|...+ |. .||+|.++.. .....+|.+|..+|++++|||||+++|+|.+....+|+
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ 773 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL 773 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence 4456789999999999999643 43 4899999765 45677899999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCC---CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 379 YKHMPNGSLYDLLHPADDT---GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
+|||++|+|..+|+..+.. ...+.....+.++.|||+|+.||+++ ++|||||.++|+|++....+||+|||+|+
T Consensus 774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999765322 35688999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCcccccccCC-CCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 456 LMNPIDTHLSTFVNGE-FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
.+...++... ++. .-...|||||.+..+.++.|+|||||||+|||++| |..||...... +.......
T Consensus 851 Diy~~~yyr~---~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--------~v~~~~~~ 919 (1025)
T KOG1095|consen 851 DIYDKDYYRK---HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--------EVLLDVLE 919 (1025)
T ss_pred hhhhchheec---cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--------HHHHHHHh
Confidence 6654333221 111 24579999999999999999999999999999999 88888754331 11111122
Q ss_pred cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 534 TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 534 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.+++ -...++++.+. +++..|+. .+|++||++..+++++..+...
T Consensus 920 ggRL-------~~P~~CP~~ly---~lM~~CW~-~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 920 GGRL-------DPPSYCPEKLY---QLMLQCWK-HDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCcc-------CCCCCCChHHH---HHHHHHcc-CChhhCccHHHHHhhhhhhhhh
Confidence 2211 11233444444 55556766 9999999999999999887554
No 18
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.4e-38 Score=319.81 Aligned_cols=246 Identities=19% Similarity=0.296 Sum_probs=192.9
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEecccccc----HHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeeeEEEec
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS----EKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERLLVYKH 381 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~ 381 (623)
...||+|++|.||+|.+ +|+.||+|++...... .+.+.+|++++.+++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46899999999999998 5889999999765332 3567899999999999999999999877 3467899999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.. ...++|..+++++.+++.|+.|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 999999999963 346899999999999999999999742 68899999999999999999999999998654311
Q ss_pred CcccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... +..........-
T Consensus 178 -------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~-- 240 (283)
T PHA02988 178 -------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLIINKNNS-- 240 (283)
T ss_pred -------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcCCC--
Confidence 12347889999999976 67899999999999999999999999753221 111111111000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
..+ ....++++. +++..|+. .||++|||++|+++.|+.+.
T Consensus 241 ---~~~-~~~~~~~l~---~li~~cl~-~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 241 ---LKL-PLDCPLEIK---CIVEACTS-HDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ---CCC-CCcCcHHHH---HHHHHHhc-CCcccCcCHHHHHHHHHHHH
Confidence 000 001233333 44456766 99999999999999999874
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=335.63 Aligned_cols=260 Identities=28% Similarity=0.424 Sum_probs=203.7
Q ss_pred ccCcccceeeccCccEEEEEEeCC--C--cE-EEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED--G--TS-LMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~--~--~~-vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
++....++||+|+||.||+|++.. + .. ||+|..+.. .....+|.+|.++|++++|||||+++|++......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344445899999999999999653 2 23 899988742 34567899999999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|||+|+||+|.++|.... ..++..+++.++.++|+||+|||+. +++||||.++|+|++.++.+||+|||+++
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred EEEEEecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 99999999999999997543 3699999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
.-.. ....... ..-+..|+|||.+....|+.++|||||||++||+++ |..||.+.... ....++.. .
T Consensus 311 ~~~~--~~~~~~~--~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~~---~ 378 (474)
T KOG0194|consen 311 AGSQ--YVMKKFL--KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIVK---N 378 (474)
T ss_pred CCcc--eeecccc--ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHHh---c
Confidence 5431 1111101 124678999999999999999999999999999998 88898754321 22222211 1
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCC
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHF 592 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~ 592 (623)
+.- .......+.++..++. .|+. .+|++||+|.++.+.|+.+......
T Consensus 379 ~~r------~~~~~~~p~~~~~~~~---~c~~-~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 379 GYR------MPIPSKTPKELAKVMK---QCWK-KDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred Ccc------CCCCCCCHHHHHHHHH---Hhcc-CChhhccCHHHHHHHHHHHHhcccc
Confidence 000 0011134445555544 6777 9999999999999999998776543
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=327.68 Aligned_cols=202 Identities=22% Similarity=0.304 Sum_probs=175.7
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHH--HHHHHHHhCCCC-CCCCcceeEEEEeCC-eeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKE--FVAEMATLGSVK-NRNLVPLLGFCMAKK-ERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~--~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~lV 378 (623)
.++|...+.||.|.||.||+|+ ..++..||+|+++......++ -.+|+..|++++ ||||+++.+++.+++ ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 3567788999999999999999 557899999999876655444 368999999998 999999999999888 89999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
||||+. +|+++++.. +..+++..+..|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.+.
T Consensus 89 fE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred HHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccc
Confidence 999965 999999754 47899999999999999999999999 99999999999999999999999999999886
Q ss_pred CCCCcccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~ 517 (623)
..... .. .+.|-+|+|||++. ...|+.+.|+||+|||++|+.+-+.-|.+....
T Consensus 162 SkpPY-Te----YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~ 216 (538)
T KOG0661|consen 162 SKPPY-TE----YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI 216 (538)
T ss_pred cCCCc-ch----hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH
Confidence 54332 22 23688999999875 678999999999999999999999999875543
No 21
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4e-39 Score=306.41 Aligned_cols=265 Identities=20% Similarity=0.254 Sum_probs=198.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccccc---HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
+.|+...++|+|+||.|||++.+ +|+.||||+|..++.. .+-.++|+++|++++|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45778889999999999999966 5999999999876542 4567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|++. ++.+-|... ...++.....+++.|++.|+.|+|++ +++||||||+||||+.++.+||+|||+|+.+...
T Consensus 82 ~~dh-TvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecch-HHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 9987 444444322 24577888999999999999999999 9999999999999999999999999999998743
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccccc------HHHHHHHHhc
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGN------LVEWIAQLSS 533 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~------l~~~~~~~~~ 533 (623)
......+ +.|-+|+|||.+.+ .+|...+||||.||++.||++|..-|.+..+.+...-. +...-.+...
T Consensus 155 gd~YTDY----VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 155 GDNYTDY----VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred cchhhhh----hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 2222222 36889999999987 68999999999999999999999988876553321110 0000011111
Q ss_pred c-Cchhhhhchhhhc-----CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 534 T-GQLQDAIDKCLVA-----KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 534 ~-~~~~~~~d~~l~~-----~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. +....+.-+.... ...+.-..-++.++-.|.. .||.+|++.+|++.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~-~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLK-MDPDDRLSCEQLLH 283 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhc-CCccccccHHHHhc
Confidence 1 1111111111000 0011112245677778888 99999999999864
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=313.70 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=202.0
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...++||.|..++||+|. .+.+..||||++.-.. ...+.+.+|+..|+.++||||++.+..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3568888999999999999999 4578999999997654 335788999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
||.+||+.++++..-. ..+++..+..|..++.+||.|||.+ |.||||+|+.||||+++|.+||+|||....+...
T Consensus 105 fMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999976554 3489999999999999999999999 9999999999999999999999999999877554
Q ss_pred CCcccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
........+.-+||+.|||||++.. ..|+.|+||||||+...|+.+|..||....+-.. + ...+.......
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv----L---l~tLqn~pp~~ 252 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV----L---LLTLQNDPPTL 252 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH----H---HHHhcCCCCCc
Confidence 4322222255679999999999653 3589999999999999999999999975322110 0 11111111100
Q ss_pred h--hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 D--AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~--~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+ .++..-. ..... .+-+..-.|+. .||++|||++++++
T Consensus 253 ~t~~~~~d~~-k~~~k---sf~e~i~~CL~-kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDED-KKFSK---SFREMIALCLV-KDPSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHh-hhhcH---HHHHHHHHHhh-cCcccCCCHHHHhc
Confidence 0 0000000 00111 33344456777 99999999999875
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=328.52 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=201.0
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeee
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 376 (623)
...+|..++.||+|+|++|++|+. ..++++|+|++.+.. ...+-...|-++|.+| .||.|++|+..|++....|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 346788899999999999999994 568999999997643 3344566788888888 8999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+++|+|.++|+.. +.|++.....++.+|+.||+|||+. |||||||||+|||+|+|++++|+|||-|+.
T Consensus 151 FvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccccc
Confidence 999999999999999754 5699999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCc-----cc----ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 457 MNPIDTH-----LS----TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 457 ~~~~~~~-----~~----~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
+.+.... .. .....-+||..|.+||++.....+..+|+|+||||||.|+.|.+||.+......++.
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk----- 298 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK----- 298 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH-----
Confidence 8653222 11 001224699999999999999999999999999999999999999986443221111
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.. ++-.+. .+.++.+..+++-.+. .||.+|+|.+++-+.
T Consensus 299 I~~----------l~y~fp-~~fp~~a~dLv~KLLv----~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 299 IQA----------LDYEFP-EGFPEDARDLIKKLLV----RDPSDRLTSQQIKAH 338 (604)
T ss_pred HHH----------hcccCC-CCCCHHHHHHHHHHHc----cCccccccHHHHhhC
Confidence 100 111111 1234455555554443 789999999887664
No 24
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.2e-38 Score=314.48 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=201.2
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||++.++++..+++|.+.........+.+|++++++++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 35777889999999999999998888999999876666677899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.++++... ..++|..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++........
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05114 84 GCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT- 156 (256)
T ss_pred CcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence 99999986432 3588999999999999999999999 9999999999999999999999999999865332111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+.+......... ..
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--------~~~~~~i~~~~~~---~~- 222 (256)
T cd05114 157 --SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--------YEVVEMISRGFRL---YR- 222 (256)
T ss_pred --ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCCC---CC-
Confidence 1112235678999999988889999999999999999999 8889864322 1111111111100 00
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
..... ..+..++.+|+. .+|++||+++|+++.|
T Consensus 223 ---~~~~~---~~~~~li~~c~~-~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 ---PKLAS---MTVYEVMYSCWH-EKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CCCCC---HHHHHHHHHHcc-CCcccCcCHHHHHHhh
Confidence 01112 345677778887 9999999999999886
No 25
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.4e-37 Score=320.33 Aligned_cols=264 Identities=20% Similarity=0.333 Sum_probs=197.4
Q ss_pred ccCcccceeeccCccEEEEEEeCC-----------------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-----------------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPL 365 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l 365 (623)
++|...+.||+|+||.||++.+++ +..||+|.+.... .....+.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788999999999999997532 3369999987542 234578999999999999999999
Q ss_pred eEEEEeCCeeeEEEecCCCCCHhhhccCCC---------------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEe
Q 006982 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPAD---------------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIH 430 (623)
Q Consensus 366 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H 430 (623)
++++.+.+..++|+||+++|+|.+++.... .....++|...++++.|++.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 999999999999999999999999885421 1123578899999999999999999999 9999
Q ss_pred cCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh--CC
Q 006982 431 RNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT--GE 508 (623)
Q Consensus 431 ~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt--g~ 508 (623)
|||||+|||+++++.+||+|||+++........ .......++..|+|||++....++.++||||||+++|||++ +.
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYY--RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCcee--EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 999999999999999999999999865432221 11122335788999999988889999999999999999997 45
Q ss_pred CCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 509 RPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 509 ~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.||...... .....+.............. .....+ ..+.+++..|+. .+|++|||+.||.+.|++
T Consensus 240 ~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~li~~cl~-~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDE-----QVIENAGEFFRDQGRQVYLF---RPPPCP---QGLYELMLQCWS-RDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHH-----HHHHHHHHHhhhcccccccc---CCCCCC---HHHHHHHHHHcc-CCchhCcCHHHHHHHHhC
Confidence 666543221 11122221111100000000 001122 245566677887 999999999999998863
No 26
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=318.12 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=195.7
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC--eeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK--ERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV~e 380 (623)
.++...+.||+|+||+||++...+ |...|||...... ...+.+.+|+.+|.+++|||||+.+|.....+ ..+++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 346667899999999999999654 8999999886542 11456889999999999999999999855554 5789999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeecccccccCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLARLMNP 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfgla~~~~~ 459 (623)
|+++|+|.+++.... + .+++.....+..|+++||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g--~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG--G-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHcC--C-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999997543 2 699999999999999999999999 9999999999999999 79999999999997763
Q ss_pred CCCcccccccCCCCcccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLV-ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
... .........||+.|||||++..+. ...++||||+||++.||+||+.||... .....++-.........
T Consensus 171 ~~~-~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-------~~~~~~~~~ig~~~~~P 242 (313)
T KOG0198|consen 171 KGT-KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-------FEEAEALLLIGREDSLP 242 (313)
T ss_pred ccc-cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-------cchHHHHHHHhccCCCC
Confidence 111 111122345999999999999643 335999999999999999999999742 11112222211111111
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
.+. ...+++..+++ ..|.. .+|++|||++++++..--..
T Consensus 243 ~ip------~~ls~~a~~Fl---~~C~~-~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 243 EIP------DSLSDEAKDFL---RKCFK-RDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCC------cccCHHHHHHH---HHHhh-cCcccCcCHHHHhhChhhhc
Confidence 111 11233444444 35666 89999999999998775443
No 27
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.7e-38 Score=323.65 Aligned_cols=285 Identities=24% Similarity=0.409 Sum_probs=212.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCc----EEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGT----SLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.+|+..+.||+|+||.||+|.+. ++. .||+|.++... ...+.+.+|+.++..++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999853 333 48999986432 3456788999999999999999999999764 5679
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++... ...+++...+.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999999643 24588999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... ...+..++..|+|||++....++.++|||||||++|||++ |+.||...... .+..... ....
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-----~~~~~~~---~~~~ 229 (316)
T cd05108 160 GADEKEY--HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILE---KGER 229 (316)
T ss_pred cCCCcce--eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHh---CCCC
Confidence 5422211 1122234678999999999999999999999999999998 99998643211 1111111 0000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCC----CCCcccccCCCCCCchhhHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHF----TTEDEIMLPSDSGDADILEE 612 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~ 612 (623)
. . ........+.+++..|+. .+|.+||++.+++..+..+..+... ...+...+|++.+.......
T Consensus 230 ~--------~--~~~~~~~~~~~li~~cl~-~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (316)
T cd05108 230 L--------P--QPPICTIDVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRAL 298 (316)
T ss_pred C--------C--CCCCCCHHHHHHHHHHcc-CChhhCcCHHHHHHHHHHHHcCCchheEecCCcccCCCCCchhHHHhhh
Confidence 0 0 001111345566778887 8999999999999999988765532 22444456666655444444
Q ss_pred HHHhc
Q 006982 613 LIVAR 617 (623)
Q Consensus 613 ~~~~~ 617 (623)
.+.++
T Consensus 299 ~~~~~ 303 (316)
T cd05108 299 MDEED 303 (316)
T ss_pred hcccC
Confidence 44333
No 28
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.2e-37 Score=313.30 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=203.5
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|++|.||+|...+++.|++|.++......+.+.+|++++++++|||++++++++...+..++|+||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 45788899999999999999988888999999987665677899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
++|.+++.... +..++|..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||+++........
T Consensus 86 ~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 86 GSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred CcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-
Confidence 99999996432 35689999999999999999999999 9999999999999999999999999999876532111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
...+...+..|+|||+..+..++.++||||||+++|||++ |+.||...... .... ........
T Consensus 160 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~---~~~~~~~~------ 223 (261)
T cd05068 160 --AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQ---QVDQGYRM------ 223 (261)
T ss_pred --ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHH---HHHcCCCC------
Confidence 1111223468999999998889999999999999999999 99898643211 1111 11110000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
.........+.+++.+|+. .+|.+||+++++.+.|+++
T Consensus 224 ----~~~~~~~~~~~~li~~~l~-~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 ----PCPPGCPKELYDIMLDCWK-EDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----CCCCcCCHHHHHHHHHHhh-cCcccCCCHHHHHHHHhcC
Confidence 0001112345566677887 8999999999999999863
No 29
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=309.95 Aligned_cols=272 Identities=24% Similarity=0.328 Sum_probs=209.0
Q ss_pred HhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC----CeeeEE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK----KERLLV 378 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~~~~lV 378 (623)
..++....+.||+|.||.||+|.|+ |..||||+|....+....-+.|+..-..+||+||+.+++.-..+ .+.+||
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred hhheeEEEEEecCccccceeecccc-CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 3456777889999999999999997 88999999976654444445566666677999999999875543 367899
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc-----CCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN-----CNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~-----~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
++|.+.|||+|+|. ...++-...++++..+|.||+|||.+ .+|.|+|||||+.||||..++.+.|+|+|+
T Consensus 288 TdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred eecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 99999999999994 36788999999999999999999965 578999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCC------CCcchhHHHHHHHHHHHHhCC----------CCCCCCCCc
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV------ATPKGDVYSFGTVLLELVTGE----------RPTNVAKAP 517 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~k~DV~sfGvil~elltg~----------~P~~~~~~~ 517 (623)
|..............+.++||.+|||||++...- .-..+||||||+|+||+.-.. .||++..+.
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~ 442 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS 442 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence 9988766555666677889999999999986432 124699999999999988532 345432222
Q ss_pred ccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 518 ETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 518 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
+...+. ....+-..++.-.+...+. ..+.+..+.++...|+- .+|..|-|+--+-+.|.++.+
T Consensus 443 DPs~ee----MrkVVCv~~~RP~ipnrW~---s~~~l~~m~klMkeCW~-~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 443 DPSFEE----MRKVVCVQKLRPNIPNRWK---SDPALRVMAKLMKECWY-ANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCHHH----HhcceeecccCCCCCcccc---cCHHHHHHHHHHHHhhc-CCchhhhHHHHHHHHHHHHhc
Confidence 111111 1111112222222333332 34788889999999988 899999999999999988764
No 30
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7.3e-38 Score=314.83 Aligned_cols=255 Identities=24% Similarity=0.395 Sum_probs=203.6
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|...++..|++|.+.......+.+.+|+.++++++|+|++++++++...+..++|+||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 46788899999999999999988889999999876555667899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.++++... ...+++.+++.++.|++.||+|||+. +++||||||+||++++++.++|+|||+++........
T Consensus 86 ~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05072 86 GSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT- 159 (261)
T ss_pred CcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCcee-
Confidence 99999996432 35688999999999999999999998 9999999999999999999999999999876432111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
......++..|+|||+.....++.++|||||||++|||+| |+.||...... .....+.... .. +
T Consensus 160 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~---~~-----~ 224 (261)
T cd05072 160 --AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-----DVMSALQRGY---RM-----P 224 (261)
T ss_pred --ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-----HHHHHHHcCC---CC-----C
Confidence 1112235678999999988889999999999999999998 99998642211 1111111100 00 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
. ....++ .+.+++.+|+. .+|++||+++++.+.|+++
T Consensus 225 ~--~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 R--MENCPD---ELYDIMKTCWK-EKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred C--CCCCCH---HHHHHHHHHcc-CCcccCcCHHHHHHHHhcC
Confidence 0 011222 34556667877 9999999999999999863
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=301.93 Aligned_cols=198 Identities=23% Similarity=0.334 Sum_probs=178.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||.|+||.|..++.+ +|..+|+|++.... ...++..+|..+|..+.||+++++.+.+.+....++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45777899999999999999954 68899999997653 33456788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||++||.|+.+++. .+.++++.+..+|.+|+.|++|||+. .|++|||||+|||+|.+|.+||+|||+|+.+..
T Consensus 124 eyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999963 46799999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
. .-+.+||+.|+|||.+.+..+...+|.|||||++|||+.|..||.+...
T Consensus 197 r-------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 R-------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred c-------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 2 1233599999999999999999999999999999999999999987654
No 32
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.5e-37 Score=313.77 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=197.0
Q ss_pred ccCcccceeeccCccEEEEEEeC----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|.+. .+..|++|.++... .....+.+|+.++.+++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45788899999999999999853 35689999987643 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++... ...++|.+++.++.|++.||+|||+. +++||||||+||+++.++.++++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 85 TEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999998643 24689999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
.... .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... +........ ..
T Consensus 159 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~-~~ 226 (266)
T cd05064 159 SEAI---YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDG-FR 226 (266)
T ss_pred ccch---hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCC-CC
Confidence 2111 11112235678999999998999999999999999999875 99999653221 111111110 00
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
... ....+. .+.+++..|+. .+|++||+++++.+.|.++
T Consensus 227 -----~~~-~~~~~~---~~~~li~~c~~-~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 -----LPA-PRNCPN---LLHQLMLDCWQ-KERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----CCC-CCCCCH---HHHHHHHHHcC-CCchhCCCHHHHHHHHHhh
Confidence 000 111222 34455566776 9999999999999998764
No 33
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1e-37 Score=330.55 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=198.3
Q ss_pred ccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
++|...+.||+|+||.||+|++ .++..||+|+++... ...+.+.+|++++..+ +||||++++++|......
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4688889999999999999973 245689999987543 3345688999999999 899999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCC-----------------------------------------------------------
Q 006982 376 LLVYKHMPNGSLYDLLHPADD----------------------------------------------------------- 396 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 396 (623)
++||||+++|+|.++++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 999999999999999854221
Q ss_pred ------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 397 ------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 397 ------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
....++|..+++++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~- 270 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY- 270 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccc-
Confidence 112578999999999999999999998 9999999999999999999999999999865432211
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.......++..|+|||++.+..++.++|||||||++|||++ |..||...... ....+++..... .
T Consensus 271 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~----~~~~~~~~~~~~---~------ 336 (375)
T cd05104 271 -VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD----SKFYKMIKEGYR---M------ 336 (375)
T ss_pred -cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch----HHHHHHHHhCcc---C------
Confidence 11112235678999999999999999999999999999998 88888643221 111111111000 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
......+. .+.+++..|+. .||++||+++||++.|++
T Consensus 337 -~~~~~~~~---~l~~li~~cl~-~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 337 -LSPECAPS---EMYDIMKSCWD-ADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred -CCCCCCCH---HHHHHHHHHcc-CChhHCcCHHHHHHHHHh
Confidence 00111223 34455567877 999999999999999986
No 34
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=327.42 Aligned_cols=245 Identities=27% Similarity=0.455 Sum_probs=195.5
Q ss_pred cccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 308 SKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
+..+-||+|+.|.||+|+++ +..||||+++.-. +.+|+-|++++||||+.+.|+|....-.+||||||+.|-|
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~elk------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhhhh------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 34567999999999999997 6789999875332 3578889999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+.|+ .+..+.......+..+||.||.|||.+ .|||||||+-||||+.+..+||+|||-++......+..+
T Consensus 200 ~~VLk----a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMS-- 270 (904)
T KOG4721|consen 200 YEVLK----AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMS-- 270 (904)
T ss_pred HHHHh----ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhh--
Confidence 99996 446677788889999999999999999 999999999999999999999999999998765432222
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
-.||..|||||++...++++|+||||||||||||+||..||.+.+......+.- . ....+ ...
T Consensus 271 ---FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG---------s-NsL~L----pvP 333 (904)
T KOG4721|consen 271 ---FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG---------S-NSLHL----PVP 333 (904)
T ss_pred ---hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEecc---------C-Ccccc----cCc
Confidence 248999999999999999999999999999999999999997644322111100 0 00011 112
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 548 KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 548 ~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
...++.+.-+++ .|+. ..|..||++.+++..|+-...+
T Consensus 334 stcP~GfklL~K---qcw~-sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 334 STCPDGFKLLLK---QCWN-SKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred ccCchHHHHHHH---HHHh-cCCCCCccHHHHHHHHhhcCHH
Confidence 234445554444 3555 6799999999999999865444
No 35
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.7e-38 Score=319.04 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=199.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccH---HHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---KEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+..+.. +...+|++++++++|||||.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777889999999999999965 67889999997765444 557889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+.| +|+.+|.. ...+++.....++.+++.||.|||+. +|.|||+||+|||++.++.+|++|||+|+-+...
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 9987 99999963 46799999999999999999999999 9999999999999999999999999999987653
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... .....||+-|||||+..+..|+..+|.||+|||+||+++|++||... .+.+.++....++.
T Consensus 154 t~v----ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--------si~~Lv~~I~~d~v---- 217 (808)
T KOG0597|consen 154 TSV----LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--------SITQLVKSILKDPV---- 217 (808)
T ss_pred cee----eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--------HHHHHHHHHhcCCC----
Confidence 221 22234999999999999999999999999999999999999999642 23333333332211
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
........+...+++-.+. .||..|.+-.+++..
T Consensus 218 ----~~p~~~S~~f~nfl~gLL~----kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 ----KPPSTASSSFVNFLQGLLI----KDPAQRLTWTDLLGH 251 (808)
T ss_pred ----CCcccccHHHHHHHHHHhh----cChhhcccHHHHhcC
Confidence 0001123344445444333 899999999887653
No 36
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.4e-37 Score=311.61 Aligned_cols=255 Identities=24% Similarity=0.392 Sum_probs=201.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.+|...+.||+|+||.||+|... .++.|++|.+.........+.+|++++.+++|||++++++++......++|+||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 34777889999999999999965 58889999988766566789999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||++.........
T Consensus 86 ~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 86 YGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 999999986432 25689999999999999999999999 9999999999999999999999999999876432211
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+..........
T Consensus 161 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~------ 223 (263)
T cd05052 161 ---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEKGYR------ 223 (263)
T ss_pred ---ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCC------
Confidence 1112224678999999998899999999999999999998 8888864321 111111111000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
... ....+.+ +.+++..|+. .+|++||++.++++.|+.+
T Consensus 224 ~~~-~~~~~~~---~~~li~~cl~-~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 MER-PEGCPPK---VYELMRACWQ-WNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCC-CCCCCHH---HHHHHHHHcc-CCcccCCCHHHHHHHHHhh
Confidence 000 1112333 4445567777 8999999999999999865
No 37
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.2e-37 Score=329.70 Aligned_cols=260 Identities=23% Similarity=0.356 Sum_probs=197.8
Q ss_pred hccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 374 (623)
.++|...+.||+|+||.||++... ++..||+|+++... .....+.+|+++++.+ +|+||++++++|.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 346888999999999999998742 34579999997543 2345688999999999 89999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCC----------------------------------------------------------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD---------------------------------------------------------- 396 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 396 (623)
.++||||+++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998853210
Q ss_pred --------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccc
Q 006982 397 --------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468 (623)
Q Consensus 397 --------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 468 (623)
....+++...++++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........ ...
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~--~~~ 271 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY--VVK 271 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce--eec
Confidence 113478899999999999999999999 9999999999999999999999999999865432111 111
Q ss_pred cCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 469 NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 469 ~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....... ..... ..... ... ..
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~----~~~~~-----~~~-~~ 337 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKM----VKRGY-----QMS-RP 337 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHH----HHccc-----Ccc-CC
Confidence 22235678999999998899999999999999999997 999987532211 11110 00000 000 00
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 548 KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 548 ~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
...+.+ +.+++..|+. .||++||++.+|++.|+++
T Consensus 338 ~~~~~~---l~~li~~cl~-~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 338 DFAPPE---IYSIMKMCWN-LEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHH
Confidence 112233 3444456776 9999999999999999976
No 38
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=312.16 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=195.5
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC----eeeEEEecCCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK----ERLLVYKHMPNG 385 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV~e~~~~g 385 (623)
.++||+|+||.||||++. ++.||||++.......-.-+++|..+-.++|+||++++++-.... +.+||++|.+.|
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kG 293 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKG 293 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCC
Confidence 568999999999999996 489999999765433333344555566779999999999876554 789999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc------CCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN------CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~------~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
+|.++|. ...++|....+|+..+++||+|||+. .+|+|+|||||++||||..|+++.|+|||+|..+.+
T Consensus 294 sL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 294 SLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEP 368 (534)
T ss_pred cHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecC
Confidence 9999994 46799999999999999999999976 367899999999999999999999999999999876
Q ss_pred CCCcccccccCCCCcccccCcccccCCC------CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLV------ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
...... ..+.+||.+|||||++.+.. .-.+.||||+|.|||||++...-++. .....++.-+..-+...-.
T Consensus 369 ~~~~~d--~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 369 GKPQGD--THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred CCCCcc--hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC-CCCCcccCchhHHhcCCCC
Confidence 433322 23478999999999997542 12378999999999999997765532 1111121111111111000
Q ss_pred cCchhhhh---------chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 534 TGQLQDAI---------DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 534 ~~~~~~~~---------d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
-+++++.+ -..+.. ...+..+.+..-.|+. .||+.|.|+.=|-+.+.++..-.
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~---h~~~~~l~et~EeCWD-hDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRK---HAGMAVLCETIEECWD-HDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhc---CccHHHHHHHHHHHcC-CchhhhhhhHHHHHHHHHHhccC
Confidence 01111111 111111 1344455555567777 99999999999999998875444
No 39
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.1e-37 Score=311.41 Aligned_cols=256 Identities=24% Similarity=0.422 Sum_probs=205.3
Q ss_pred HhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccc-cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR-SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+..+|...+.||+|+||.||+|...++..+++|.+..... ....+..|+++++.++|||++++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3456888899999999999999988899999999876543 456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.++++... +..+++.++..++.|++.|+.|||+. +++|+||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 84 MEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred cccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 99999999997543 35689999999999999999999999 99999999999999999999999999998764321
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
.. .....++..|+|||......++.++||||||+++|||++ |+.||...... .....+. ..
T Consensus 159 ~~----~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~---~~------ 220 (261)
T cd05148 159 YL----SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYDQIT---AG------ 220 (261)
T ss_pred cc----ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHH---hC------
Confidence 11 112336778999999988889999999999999999998 89998643211 1111111 00
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
............+.+++.+|+. .+|++|||++++++.|+.+
T Consensus 221 ----~~~~~~~~~~~~~~~~i~~~l~-~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 221 ----YRMPCPAKCPQEIYKIMLECWA-AEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CcCCCCCCCCHHHHHHHHHHcC-CCchhCcCHHHHHHHHhcC
Confidence 0000011112345566678887 9999999999999999864
No 40
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8.9e-38 Score=319.11 Aligned_cols=221 Identities=24% Similarity=0.322 Sum_probs=185.4
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
..++|....+||+|+||.||.++.+ +|..+|+|+++++. ...+....|-.+|....+|+||+++..|++.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999965 68999999998764 345678889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+|||++..+|.. ...|++..+..++.+++.|+..+|.. |||||||||+|+|||..|++||+||||+.-+
T Consensus 219 iMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 9999999999999963 35688888889999999999999999 9999999999999999999999999999532
Q ss_pred CC----------------------CCCc-----cc----------------ccccCCCCcccccCcccccCCCCCcchhH
Q 006982 458 NP----------------------IDTH-----LS----------------TFVNGEFGDLGYVAPEYARTLVATPKGDV 494 (623)
Q Consensus 458 ~~----------------------~~~~-----~~----------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DV 494 (623)
.. .+.. .. ......+|||.|||||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 11 0000 00 00113579999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 495 YSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 495 ~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
||+|||+|||+.|.+||...+..+.+ ..+..|...+
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~-rkI~nwr~~l 407 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETY-RKIVNWRETL 407 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhhhc
Confidence 99999999999999999986665433 3455555433
No 41
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=324.88 Aligned_cols=254 Identities=20% Similarity=0.310 Sum_probs=198.9
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc----c--ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCe
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS----Q--RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKE 374 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 374 (623)
..+.|...+.||+|.||.||.|.. .++..||+|++... . ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 346788899999999999999985 46899999976543 1 22445668999999999 9999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeeccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDFGL 453 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Dfgl 453 (623)
.++||||+.+|+|.+++.. ...+.+..+.+++.|++.|++|+|+. +|+||||||+|||+|.+ +++||+|||+
T Consensus 95 ~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999999999999964 35688899999999999999999999 99999999999999999 9999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCC-CC-cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV-AT-PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
+..... ......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++...... ....
T Consensus 168 s~~~~~----~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l--------~~ki 235 (370)
T KOG0583|consen 168 SAISPG----EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL--------YRKI 235 (370)
T ss_pred ccccCC----CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH--------HHHH
Confidence 997631 122344556999999999999877 76 789999999999999999999986332211 1111
Q ss_pred hc-cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 532 SS-TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 532 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.. .-.+...++ ..+...++. +|+. .+|.+|+++.+++ .-.-++.
T Consensus 236 ~~~~~~~p~~~~--------S~~~~~Li~---~mL~-~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 236 RKGEFKIPSYLL--------SPEARSLIE---KMLV-PDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred hcCCccCCCCcC--------CHHHHHHHH---HHcC-CCcccCCCHHHHh-hChhhcc
Confidence 11 011111110 333333333 3333 9999999999998 4444444
No 42
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.5e-37 Score=312.88 Aligned_cols=258 Identities=26% Similarity=0.437 Sum_probs=199.7
Q ss_pred ccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|.... ...|++|.+.... .....+.+|++.+.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357778999999999999998643 2578999886543 23456889999999999999999999999988999
Q ss_pred EEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC
Q 006982 377 LVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF 444 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~ 444 (623)
+++||+++|+|.+++..... ....+++...+.++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 99999999999999864321 114688999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccccc
Q 006982 445 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGN 523 (623)
Q Consensus 445 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~ 523 (623)
.++|+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 162 ~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-----~ 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADYY--RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-----E 234 (283)
T ss_pred cEEECCCcceeeccccccc--cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 9999999999865432211 11122346788999999988889999999999999999998 99998753221 1
Q ss_pred HHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 524 LVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 524 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
+...+. ....... ....+. .+.++...|+. .+|.+||+++||++.|+++
T Consensus 235 ~~~~i~----~~~~~~~------~~~~~~---~~~~l~~~c~~-~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIEMIR----SRQLLPC------PEDCPA---RVYALMIECWN-EIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHH----cCCcCCC------cccCCH---HHHHHHHHHcc-CChhhCcCHHHHHHHHhcC
Confidence 111111 1111110 111223 34555567877 9999999999999999753
No 43
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.1e-37 Score=313.83 Aligned_cols=198 Identities=27% Similarity=0.378 Sum_probs=172.1
Q ss_pred CcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
|...+.||+|+||.||++.. .+++.||+|.+.... .....+.+|++++.+++|+|++++.+++.+.+..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66788999999999999985 578999999986432 2234578899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred cCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 99999998875432 24689999999999999999999999 99999999999999999999999999998754321
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. .....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~-----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 157 T-----VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred e-----ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 1 12345899999999999999999999999999999999999999754
No 44
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9e-38 Score=314.06 Aligned_cols=248 Identities=34% Similarity=0.506 Sum_probs=188.1
Q ss_pred cceeeccCccEEEEEEeC-----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 310 NNIIGSGRTGTMYKALLE-----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.+.||.|.||.||+|.+. .+..|+||.++... ...+.+.+|++.+.+++||||++++|++...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 578999999999999976 35779999996543 33678999999999999999999999999888899999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.++|+.. ....+++.+++.|+.|+++||+|||+. +++|+||+++||++++++.+||+|||++........
T Consensus 84 ~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 84 PGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 999999999755 235789999999999999999999999 999999999999999999999999999987632211
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
. ...........|+|||.+....++.++||||||+++|||++ |+.||.... ..+...... .......
T Consensus 159 ~--~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~--------~~~~~~~~~-~~~~~~~- 226 (259)
T PF07714_consen 159 Y--KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD--------NEEIIEKLK-QGQRLPI- 226 (259)
T ss_dssp E--EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC--------HHHHHHHHH-TTEETTS-
T ss_pred c--ccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccc-cccccee-
Confidence 1 11122336788999999998889999999999999999999 678875421 112222221 1111111
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
....+.. +..++..|+. .+|++||++.++++.|
T Consensus 227 -----~~~~~~~---~~~li~~C~~-~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 -----PDNCPKD---IYSLIQQCWS-HDPEKRPSFQEILQEL 259 (259)
T ss_dssp -----BTTSBHH---HHHHHHHHT--SSGGGS--HHHHHHHH
T ss_pred -----ccchhHH---HHHHHHHHcC-CChhhCcCHHHHHhcC
Confidence 1112333 4455567777 9999999999999876
No 45
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.1e-37 Score=308.01 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=199.8
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|...++..+|+|.+.........+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 35777889999999999999988777899999886666667899999999999999999999999988889999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.++........
T Consensus 84 ~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05113 84 GCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT- 156 (256)
T ss_pred CcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCcee-
Confidence 99999986432 3689999999999999999999999 9999999999999999999999999999865432111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
...+..++..|+|||+..+..++.++||||||+++|||++ |..||...... +........... .
T Consensus 157 --~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~~-~---- 221 (256)
T cd05113 157 --SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGLRL-Y---- 221 (256)
T ss_pred --ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCCCC-C----
Confidence 1112335678999999988889999999999999999999 99998643221 111111111000 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
...... ..+.+++..|+. .+|.+||++.++++.|+
T Consensus 222 --~~~~~~---~~~~~li~~cl~-~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 --RPHLAS---EKVYAIMYSCWH-EKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCC---HHHHHHHHHHcC-CCcccCCCHHHHHHhhC
Confidence 000112 345556667877 99999999999998763
No 46
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-36 Score=307.07 Aligned_cols=255 Identities=23% Similarity=0.399 Sum_probs=200.6
Q ss_pred ccCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|.+.. ...|++|.+.... .....+.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 468888999999999999999742 4579999886543 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++.... ..+++..+++++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 99999999999986432 3689999999999999999999998 99999999999999999999999999999765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
........ ....++..|+|||.+.+..++.++||||||+++|||++ |..||...... ...+.+..... .
T Consensus 158 ~~~~~~~~--~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~---~ 227 (266)
T cd05033 158 DSEATYTT--KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVIKAVEDGYR---L 227 (266)
T ss_pred ccccceec--cCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHHHHHHcCCC---C
Confidence 22211111 12235678999999998899999999999999999998 99998542211 11111111000 0
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
+. ....+ ..+.+++..|+. .+|++||++.||+++|+++
T Consensus 228 -----~~--~~~~~---~~l~~li~~cl~-~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 -----PP--PMDCP---SALYQLMLDCWQ-KDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----CC--CCCCC---HHHHHHHHHHcC-CCcccCcCHHHHHHHHHhh
Confidence 00 00112 235566677887 8999999999999999875
No 47
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.4e-37 Score=307.00 Aligned_cols=253 Identities=28% Similarity=0.413 Sum_probs=200.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|..+++..+++|.+.......+.+.+|++++++++|+|++++++++. ....+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 457778999999999999999888889999999876666778999999999999999999999875 4567899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
++|.++++... ...+++.+++.++.+++.||+|||+. +++||||||+||++++++.++|+|||++..........
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 85 GSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 99999996432 24689999999999999999999999 99999999999999999999999999998754322111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
..+..++..|+|||+..+..++.++||||||+++|||++ |..||..... .+..........
T Consensus 160 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~------- 221 (260)
T cd05070 160 ---RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQVERGYR------- 221 (260)
T ss_pred ---ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCC-------
Confidence 112235678999999988889999999999999999999 8888864321 111111111000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
..........+.+++.+|+. .+|++|||++++.+.|++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~-~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 ---MPCPQDCPISLHELMLQCWK-KDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCCCcCCHHHHHHHHHHcc-cCcccCcCHHHHHHHHhc
Confidence 00011112345566667777 899999999999999875
No 48
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.9e-37 Score=306.96 Aligned_cols=250 Identities=23% Similarity=0.372 Sum_probs=198.1
Q ss_pred cCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
+|+..+.||+|+||.||++.++++..+++|.+.........+.+|++++++++||||+++++++......++|+||++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 46778899999999999999887788999998766556678889999999999999999999999999999999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
+|.+++.... ..++|..++.++.|++.|++|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 85 ~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 85 CLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccccc--
Confidence 9999986432 3689999999999999999999999 9999999999999999999999999999865432111
Q ss_pred ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
...+..++..|+|||++.+..++.++||||||+++|||++ |+.||...... .... ..... ....
T Consensus 157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~---~~~~~------~~~~ 221 (256)
T cd05059 157 -SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVE---SVSAG------YRLY 221 (256)
T ss_pred -ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHH---HHHcC------CcCC
Confidence 1112224568999999998889999999999999999999 78888643221 1111 11000 0000
Q ss_pred hhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.....+ ..+.+++.+|+. .+|++|||+.|+++.|
T Consensus 222 -~~~~~~---~~~~~li~~cl~-~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 -RPKLAP---TEVYTIMYSCWH-EKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCCCCC---HHHHHHHHHHhc-CChhhCcCHHHHHHHh
Confidence 001122 245566677877 8999999999999886
No 49
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.5e-36 Score=305.70 Aligned_cols=254 Identities=27% Similarity=0.388 Sum_probs=200.5
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|...+...|++|++.......+.+.+|++++.+++||||+++++++.. ...++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCC
Confidence 4588889999999999999998877789999998765566789999999999999999999998754 557899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.++|+|||.++........
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 85 GSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred CcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 99999996432 24679999999999999999999999 9999999999999999999999999999866432211
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
......++..|+|||+.....++.++||||||+++|||+| |..||...... +...........
T Consensus 159 --~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~~~~------ 222 (262)
T cd05071 159 --ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYRM------ 222 (262)
T ss_pred --cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcCCCC------
Confidence 1112336678999999988889999999999999999999 78788643221 101111000000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
....+....+.+++..|+. .+|++||+++++.+.|++.
T Consensus 223 ----~~~~~~~~~l~~li~~~l~-~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 ----PCPPECPESLHDLMCQCWR-KEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----CCccccCHHHHHHHHHHcc-CCcccCCCHHHHHHHHHHh
Confidence 0011122345667778887 9999999999999999864
No 50
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=298.35 Aligned_cols=202 Identities=23% Similarity=0.282 Sum_probs=173.3
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccccc---HHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 378 (623)
++|.+.+.|++|.||.||+|+. +++..||+|+++..... .-.-.+||.+|.+++|||||.+..+.... +..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 5688889999999999999995 46889999999865532 23457899999999999999999988754 578999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
||||+. +|..+++.. .+++...+...+..|+.+|++|||+. .|+|||||++|+|++..|.+||+|||+|+.+.
T Consensus 156 Me~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred HHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999987 999999743 36788999999999999999999999 89999999999999999999999999999887
Q ss_pred CCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~ 517 (623)
..-..... .+-|..|+|||.+.+ ..|+...|+||+|||+.||+++++-|.+....
T Consensus 229 sp~k~~T~----lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~ 284 (419)
T KOG0663|consen 229 SPLKPYTP----LVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI 284 (419)
T ss_pred CCcccCcc----eEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH
Confidence 64333322 235899999998876 46899999999999999999999998875543
No 51
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-36 Score=305.29 Aligned_cols=260 Identities=20% Similarity=0.302 Sum_probs=202.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|+.. +++.|++|.+... ......+.+|+++++.++|||++++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888899999999999999954 7899999987542 223456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.........+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998854333345688899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
... ......++..|+|||++.+..++.++||||||+++|||++|+.||..... ....+........
T Consensus 159 ~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~------~~~~~~~~~~~~~---- 224 (267)
T cd08228 159 KTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLFSLCQKIEQCD---- 224 (267)
T ss_pred hhH----HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc------cHHHHHHHHhcCC----
Confidence 221 11223478899999999888889999999999999999999999864321 1112211111100
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
.+........ ..+.+++..|+. .+|++||++.+|++.+++++
T Consensus 225 --~~~~~~~~~~---~~~~~li~~cl~-~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 225 --YPPLPTEHYS---EKLRELVSMCIY-PDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --CCCCChhhcC---HHHHHHHHHHCC-CCcccCcCHHHHHHHHHHhc
Confidence 0000000112 234455556776 99999999999999999875
No 52
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.7e-36 Score=310.20 Aligned_cols=261 Identities=23% Similarity=0.407 Sum_probs=203.0
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+++.. ++..+++|.+.... ...+.+.+|++.+.+++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777889999999999999742 34568889886544 334678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC
Q 006982 378 VYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~ 445 (623)
||||+++++|.+++..... ....++|..+++++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999864321 124589999999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccH
Q 006982 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNL 524 (623)
Q Consensus 446 ~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l 524 (623)
++|+|||+++........ .......++..|+|||++.+..++.++||||||+++|||+| |+.||......
T Consensus 162 ~~l~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------- 232 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT------- 232 (291)
T ss_pred EEECCCCcccccCCCcee--ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------
Confidence 999999999865432211 11122346788999999998899999999999999999999 99998643221
Q ss_pred HHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 525 VEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
+...... ....... ....+ ..+.+++..|+. .+|++||++.+|+++|+++...
T Consensus 233 -~~~~~~~-~~~~~~~------~~~~~---~~~~~li~~~l~-~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 233 -EVIECIT-QGRVLER------PRVCP---KEVYDIMLGCWQ-REPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -HHHHHHh-CCCCCCC------CccCC---HHHHHHHHHHcc-cChhhCcCHHHHHHHHHHHHhh
Confidence 1111111 1111000 00112 245566677887 9999999999999999998653
No 53
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1e-36 Score=318.22 Aligned_cols=261 Identities=23% Similarity=0.361 Sum_probs=198.9
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC-Ce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK-KE 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~ 374 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+..|++++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888899999999999999632 34689999987543 2345678899999999 899999999988755 45
Q ss_pred eeEEEecCCCCCHhhhccCCCCC---------------------------------------------------------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDT--------------------------------------------------------- 397 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~--------------------------------------------------------- 397 (623)
.++++||+++|+|.+++......
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 77999999999999998542210
Q ss_pred CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccc
Q 006982 398 GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477 (623)
Q Consensus 398 ~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y 477 (623)
...++|..+.+++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++.+...... .......++..|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~--~~~~~~~~~~~y 241 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKGDARLPLKW 241 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch--hhccCCCCCccc
Confidence 13689999999999999999999999 9999999999999999999999999999876432211 111223356789
Q ss_pred cCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHH
Q 006982 478 VAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQ 556 (623)
Q Consensus 478 ~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 556 (623)
+|||++.+..++.++|||||||++|||++ |..||......+ .+...+ ....... ..... ...
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~----~~~~~~----~~~~~~~------~~~~~---~~~ 304 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE----EFCRRL----KEGTRMR------APEYA---TPE 304 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH----HHHHHH----hccCCCC------CCccC---CHH
Confidence 99999999999999999999999999998 999986532211 111111 1100000 00111 234
Q ss_pred HHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 557 FLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 557 ~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
+.+++.+|+. .+|++||++.|+++.|+++.+
T Consensus 305 ~~~l~~~cl~-~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWH-NNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHh
Confidence 5666778887 899999999999999998754
No 54
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-38 Score=321.12 Aligned_cols=260 Identities=24% Similarity=0.384 Sum_probs=210.1
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.+..-.++||-|.||.||.|.|+. ...||||.++......++|+.|..+|+.++|||+|+++|+|......|||+|||.
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 344556889999999999999874 6789999999988889999999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.++|..... ..++-...+.+|.||+.||+||..+ ++|||||.++|+|+.++..+||+|||+++++....+.
T Consensus 347 yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT 421 (1157)
T KOG4278|consen 347 YGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT 421 (1157)
T ss_pred CccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence 9999999975432 4566777899999999999999999 9999999999999999999999999999988653321
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
...+..-.+.|.|||.+....++.|+|||+|||+||||.| |..||.+.+.. .+.++++
T Consensus 422 ---AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS------------------qVY~LLE 480 (1157)
T KOG4278|consen 422 ---AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------------QVYGLLE 480 (1157)
T ss_pred ---cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH------------------HHHHHHh
Confidence 1122224678999999999999999999999999999998 99998763221 1222333
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
+-.+-++.+..-.++-++...|+. ++|.+||+++|+.+.++.+-..-+
T Consensus 481 kgyRM~~PeGCPpkVYeLMraCW~-WsPsDRPsFaeiHqafEtmf~~sS 528 (1157)
T KOG4278|consen 481 KGYRMDGPEGCPPKVYELMRACWN-WSPSDRPSFAEIHQAFETMFSSSS 528 (1157)
T ss_pred ccccccCCCCCCHHHHHHHHHHhc-CCcccCccHHHHHHHHHHHhcccc
Confidence 222222222233344555567777 999999999999999987644433
No 55
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.1e-36 Score=323.84 Aligned_cols=262 Identities=21% Similarity=0.334 Sum_probs=200.2
Q ss_pred hccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 374 (623)
.++|...++||+|+||.||+|... .+..||+|++.... ...+.+.+|++++.++. ||||+++++++.+...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457888899999999999999852 23469999996543 23467899999999995 9999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCC----------------------------------------------------------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD---------------------------------------------------------- 396 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 396 (623)
.++||||+++|+|.++++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999998854210
Q ss_pred ----------------------------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC
Q 006982 397 ----------------------------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 442 (623)
Q Consensus 397 ----------------------------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~ 442 (623)
....+++..++.++.|++.||+|||+. +|+||||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 013478889999999999999999999 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccc
Q 006982 443 DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFK 521 (623)
Q Consensus 443 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~ 521 (623)
++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~---- 346 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY--VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD---- 346 (400)
T ss_pred CCEEEEEeCCcceeccccccc--cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh----
Confidence 999999999999865432211 11122346788999999988889999999999999999997 99998643211
Q ss_pred ccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
..+...+.. .... . ...... ..+.+++..|+. .+|++||++.+|.++|+++.+
T Consensus 347 ~~~~~~~~~---~~~~------~-~~~~~~---~~l~~li~~cl~-~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 347 STFYNKIKS---GYRM------A-KPDHAT---QEVYDIMVKCWN-SEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHHHHHhc---CCCC------C-CCccCC---HHHHHHHHHHCc-cCHhHCcCHHHHHHHHHHHcC
Confidence 011111110 0000 0 001112 235556667877 999999999999999998654
No 56
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.9e-37 Score=289.18 Aligned_cols=202 Identities=22% Similarity=0.335 Sum_probs=175.3
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccccc---HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRS---EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.+|...+++|+|.||.||+|+ .++|+.||+|+++..... .....+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 357778999999999999999 568999999999765432 4567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
||+. +|...+++. ...++-.+...++.++.+|++|+|.+ .|.||||||.|+|++.+|.+||+|||+|+...+.
T Consensus 82 fm~t-dLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9987 999999753 35788899999999999999999999 8999999999999999999999999999988754
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~ 517 (623)
...... .+-|-.|+|||.+.+ ..|+..+|+||.|||+.||+-|.+-|.+..+-
T Consensus 155 ~~~~~~----~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi 208 (318)
T KOG0659|consen 155 NRIQTH----QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI 208 (318)
T ss_pred Cccccc----ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence 433222 145789999998875 57999999999999999999998777765543
No 57
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.2e-36 Score=309.11 Aligned_cols=256 Identities=23% Similarity=0.394 Sum_probs=199.1
Q ss_pred ccCcccceeeccCccEEEEEEeCC------CcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|...+ +..|++|.+..... ..+.+.+|++++.+++|||++++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457778999999999999998643 47899999876533 3568999999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCC----------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 377 LVYKHMPNGSLYDLLHPAD----------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~----------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
+||||+++|+|.+++.... .....+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 9999999999999996532 1234588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
+|+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 162 kl~d~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-------- 231 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-------- 231 (280)
T ss_pred EECCcccceecccCcce--ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------
Confidence 99999999865332211 11112235788999999999999999999999999999998 99998643221
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
+...... .+..... ....+. .+.+++..|+. .+|++||++.||++.|+
T Consensus 232 ~~~~~~~-~~~~~~~------~~~~~~---~~~~li~~~l~-~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECIT-QGRLLQR------PRTCPS---EVYDIMLGCWK-RDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHH-cCCcCCC------CCCCCH---HHHHHHHHHcC-CCcccCCCHHHHHHHhh
Confidence 1111111 1110000 011222 34455556776 99999999999999886
No 58
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-36 Score=307.63 Aligned_cols=257 Identities=26% Similarity=0.430 Sum_probs=196.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCc----EEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGT----SLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|.+. ++. .+++|.+.... ....++..|+..+.+++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 45777899999999999999964 344 47777775432 233567888889999999999999998754 45678
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
++||+++|+|.+++... ...++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 99999999999999643 24689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... ......++..|+|||++.+..++.++||||||+++||+++ |+.||...... ...+.+. .+.
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~----~~~ 228 (279)
T cd05111 160 YPDDKKY--FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-----EVPDLLE----KGE 228 (279)
T ss_pred cCCCccc--ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHH----CCC
Confidence 4332211 1122346788999999998899999999999999999998 99998653211 1111111 111
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.. .. ..... ..+.+++..|+. .+|++|||+.|+++.|..+..+
T Consensus 229 ~~--~~----~~~~~---~~~~~li~~c~~-~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 229 RL--AQ----PQICT---IDVYMVMVKCWM-IDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred cC--CC----CCCCC---HHHHHHHHHHcC-CCcccCcCHHHHHHHHHHHHhC
Confidence 00 00 01111 234556678888 8999999999999999987653
No 59
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.9e-36 Score=304.47 Aligned_cols=253 Identities=26% Similarity=0.412 Sum_probs=201.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...++||+|+||.||+|..++++.|++|.+.........+.+|++++++++|+|++++++++. .+..++++||+++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMEN 84 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCC
Confidence 467888999999999999999989999999999877666778999999999999999999999864 4568999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... +..+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05067 85 GSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-
Confidence 99999986433 35689999999999999999999998 9999999999999999999999999999865422111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
......++..|+|||++....++.++||||||+++||+++ |+.||...... +........... .
T Consensus 159 --~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~~-~---- 223 (260)
T cd05067 159 --AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGYRM-P---- 223 (260)
T ss_pred --cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCCCC-C----
Confidence 1112235678999999988889999999999999999999 99999753321 111111110000 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.....+. ++.+++.+|+. .+|++||+++++...|+.
T Consensus 224 --~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 --RPDNCPE---ELYELMRLCWK-EKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCH---HHHHHHHHHcc-CChhhCCCHHHHHHHhhc
Confidence 0111223 34555557776 899999999999999875
No 60
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-37 Score=320.05 Aligned_cols=241 Identities=24% Similarity=0.341 Sum_probs=194.0
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 377 (623)
-++|...++||+|.||.|+++..+ ++..+|||.+++.. ...+..+.|-+++... +||.+++++.+|+++++.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467888999999999999999965 67889999998753 3456677787777666 69999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+.||++..+.+ ...+++..+.-+|..|+.||.|||++ +||+||||-+|||+|.+|++||+|||+++..
T Consensus 447 vmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999665553 35799999999999999999999999 9999999999999999999999999999964
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
-..+...+++ +||+.|||||++.+..|+..+|.|||||+||||+.|..||.+++..+.+...+ .
T Consensus 519 m~~g~~TsTf----CGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~--------~---- 582 (694)
T KOG0694|consen 519 MGQGDRTSTF----CGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV--------N---- 582 (694)
T ss_pred CCCCCccccc----cCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh--------c----
Confidence 3222333344 49999999999999999999999999999999999999998765433221111 1
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTM 576 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~ 576 (623)
|.-+-....+.|...+++..+. .+|++|.-+
T Consensus 583 ----d~~~yP~~ls~ea~~il~~ll~----k~p~kRLG~ 613 (694)
T KOG0694|consen 583 ----DEVRYPRFLSKEAIAIMRRLLR----KNPEKRLGS 613 (694)
T ss_pred ----CCCCCCCcccHHHHHHHHHHhc----cCcccccCC
Confidence 0111111234566666665554 789999866
No 61
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.2e-36 Score=302.83 Aligned_cols=253 Identities=28% Similarity=0.428 Sum_probs=197.9
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|++|.||++...++..+++|.+.......+.+.+|++++++++|||++++++++. .+..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 457778899999999999999887778999998766556678899999999999999999998875 4567899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.++++... ...++|..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05069 85 GSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence 99999996532 34589999999999999999999998 9999999999999999999999999999865432211
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
......++..|+|||+..+..++.++||||||+++|||++ |+.||...... ....+. ...... +
T Consensus 159 --~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~---~~~~~~-----~ 223 (260)
T cd05069 159 --ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-----EVLEQV---ERGYRM-----P 223 (260)
T ss_pred --ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH---HcCCCC-----C
Confidence 1112235678999999988889999999999999999999 88898653221 111111 111000 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.....+.+ +..++..|+. .+|++||++++|.+.|++
T Consensus 224 --~~~~~~~~---~~~li~~~l~-~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 --CPQGCPES---LHELMKLCWK-KDPDERPTFEYIQSFLED 259 (260)
T ss_pred --CCcccCHH---HHHHHHHHcc-CCcccCcCHHHHHHHHhc
Confidence 00112233 3444456776 999999999999999975
No 62
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.3e-36 Score=309.01 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=198.6
Q ss_pred cCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
+|...+.||+|+||.||+|... ....+++|.+.... .....+.+|+.++.+++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3667889999999999999853 23568888886543 234578899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCC--------------------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCc
Q 006982 378 VYKHMPNGSLYDLLHPAD--------------------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKC 437 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~--------------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~N 437 (623)
|+||+++|+|.+++.... .....+++.+++.++.|++.|++|||+. +++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 999999999999975421 1124588999999999999999999998 99999999999
Q ss_pred eeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCC
Q 006982 438 ILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKA 516 (623)
Q Consensus 438 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~ 516 (623)
|++++++.+||+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVK--RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhc--ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999986543222111 112235678999999988889999999999999999998 9999864321
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
. .+.++...... .. ......+ .+.+++..|+. .+|++||+++|+++.|+++-.
T Consensus 236 ~-----~~~~~~~~~~~---------~~-~~~~~~~---~~~~~i~~cl~-~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 E-----RLFNLLKTGYR---------ME-RPENCSE---EMYNLMLTCWK-QEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred H-----HHHHHHhCCCC---------CC-CCCCCCH---HHHHHHHHHcc-CCcccCCCHHHHHHHHHHHHh
Confidence 1 11111111000 00 0111223 35556677877 899999999999999998754
No 63
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-37 Score=318.63 Aligned_cols=246 Identities=23% Similarity=0.335 Sum_probs=197.5
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
-|..++.||+|+.|.|..|++ .+|+.+|||++.+.. .....+++|+-+|+.++|||+++++++++++.+.|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 355578899999999999995 589999999996642 223467899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|.|++++-. .+.+.+..+.+++.||..|+.|+|+. +|+|||+||+|+|+|+.+++||+|||+|..-.+
T Consensus 93 yv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~- 164 (786)
T KOG0588|consen 93 YVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP- 164 (786)
T ss_pred ecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC-
Confidence 9999999999953 35688999999999999999999999 999999999999999999999999999986443
Q ss_pred CCcccccccCCCCcccccCcccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVAT-PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.....+.+|++.|.|||++++.+|. .++||||+|||||.|+||+.||+++ ++.......... . .+
T Consensus 165 ----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--------Nir~LLlKV~~G-~-f~ 230 (786)
T KOG0588|consen 165 ----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--------NIRVLLLKVQRG-V-FE 230 (786)
T ss_pred ----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--------cHHHHHHHHHcC-c-cc
Confidence 2234456799999999999999885 6899999999999999999999853 222222211111 0 00
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
+ ......+...++.-++ ..||+.|.|++||++.-
T Consensus 231 M------Ps~Is~eaQdLLr~ml----~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 231 M------PSNISSEAQDLLRRML----DVDPSTRITTEEILKHP 264 (786)
T ss_pred C------CCcCCHHHHHHHHHHh----ccCccccccHHHHhhCc
Confidence 0 1123344444444333 38899999999998864
No 64
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-36 Score=308.95 Aligned_cols=261 Identities=22% Similarity=0.384 Sum_probs=202.7
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.+|...+.||+|+||.||++... ++..+++|.+.... ...+.+.+|++++.+++|||++++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 45778899999999999999842 34568899886543 345678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCC---------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 378 VYKHMPNGSLYDLLHPAD---------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
|+||+++++|.+++.... .....+++.+++.++.|++.||+|||+. +++||||||+||++++++.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEe
Confidence 999999999999986432 1223589999999999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~ 527 (623)
+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...... +.
T Consensus 162 ~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~~ 231 (288)
T cd05093 162 GDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EV 231 (288)
T ss_pred ccCCccccccCCcee--ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HH
Confidence 999999865432211 11122335778999999998889999999999999999998 88888643221 11
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
...... +.... . ....+ ..+.+++..|+. .+|.+|||+.||.+.|+++...
T Consensus 232 ~~~i~~-~~~~~-----~-~~~~~---~~l~~li~~~l~-~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 232 IECITQ-GRVLQ-----R-PRTCP---KEVYDLMLGCWQ-REPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHc-CCcCC-----C-CCCCC---HHHHHHHHHHcc-CChhhCCCHHHHHHHHHHHHHh
Confidence 111111 11000 0 01122 235666677887 9999999999999999998754
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.1e-36 Score=315.60 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=196.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.||+|++.... .....+..|++++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999976 58899999997542 23456888999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999953 24688999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ..+..|...... ..
T Consensus 154 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~~~~----~~ 221 (333)
T cd05600 154 -------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW-ENLKYWKETLQR----PV 221 (333)
T ss_pred -------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH-HHHHhccccccC----CC
Confidence 122345899999999999889999999999999999999999999753321110 001111000000 00
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
..++ .....+++..++ ..|+. .+|.+||+++++++.
T Consensus 222 ~~~~---~~~~s~~~~~li---~~~l~-~~~~rr~s~~~ll~h 257 (333)
T cd05600 222 YDDP---RFNLSDEAWDLI---TKLIN-DPSRRFGSLEDIKNH 257 (333)
T ss_pred CCcc---ccccCHHHHHHH---HHHhh-ChhhhcCCHHHHHhC
Confidence 0000 001234444444 45665 889999999999865
No 66
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.7e-36 Score=307.85 Aligned_cols=259 Identities=24% Similarity=0.411 Sum_probs=198.1
Q ss_pred HhccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
.+++|+..+.||+|+||.||+|... .+..||+|++.... ....++.+|+.++..++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567888999999999999998753 24679999886432 234568899999999999999999999999899
Q ss_pred eeEEEecCCCCCHhhhccCCCCC------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDT------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
.++|+||+++|+|.+++...... ...++|..++.++.|++.||.|||+. +++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998643211 23468889999999999999999998 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~ 527 (623)
+|||+++......... ......+++.|+|||++.+..++.++|||||||++|||++ |..||...... +.
T Consensus 161 ~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~ 230 (277)
T cd05062 161 GDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QV 230 (277)
T ss_pred CCCCCccccCCcceee--cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 9999998654322211 1111235788999999998889999999999999999999 68888643211 11
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
...... ...... .....+ .+..++..|+. .+|++|||+.|+++.|++
T Consensus 231 ~~~~~~-~~~~~~------~~~~~~---~~~~li~~~l~-~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVME-GGLLDK------PDNCPD---MLFELMRMCWQ-YNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHc-CCcCCC------CCCCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHhhC
Confidence 111111 111000 011222 34556667877 999999999999998863
No 67
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.3e-36 Score=307.26 Aligned_cols=262 Identities=23% Similarity=0.403 Sum_probs=203.8
Q ss_pred hccCcccceeeccCccEEEEEEeCC-----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED-----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 375 (623)
.++|...++||+|+||.||+|...+ +..|++|++.... .....+.+|+.++.+++|||++++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 3568888999999999999999765 6889999886542 335668899999999999999999998876 4678
Q ss_pred eEEEecCCCCCHhhhccCCCCC----CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 376 LLVYKHMPNGSLYDLLHPADDT----GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
++++||+++|+|.+++...... +..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCC
Confidence 8999999999999998654321 25689999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
|+++.+.+...... .....++..|+|||++....++.++||||||+++||+++ |+.||...... .+..++.
T Consensus 162 g~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~- 233 (280)
T cd05043 162 ALSRDLFPMDYHCL--GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF-----EMAAYLK- 233 (280)
T ss_pred CCcccccCCceEEe--CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH-----HHHHHHH-
Confidence 99987644332211 112235778999999988889999999999999999999 99998653221 1111111
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
....... ....++ .+.+++..|+. .+|++|||+.||++.|+++.++
T Consensus 234 --~~~~~~~-------~~~~~~---~~~~li~~~l~-~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 234 --DGYRLAQ-------PINCPD---ELFAVMACCWA-LDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred --cCCCCCC-------CCcCCH---HHHHHHHHHcC-CChhhCCCHHHHHHHHHHHHhc
Confidence 1111000 011123 34556667877 8999999999999999998653
No 68
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-36 Score=311.40 Aligned_cols=260 Identities=27% Similarity=0.419 Sum_probs=201.7
Q ss_pred hccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 374 (623)
.++|...+.||+|+||.||++...+ ...+++|.+.... .....+.+|++++.++ +|+||+++++++..+..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 4568888999999999999998642 3578999887532 2345688999999999 89999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCC------------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC
Q 006982 375 RLLVYKHMPNGSLYDLLHPAD------------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 442 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~ 442 (623)
.+++|||+++|+|.++++... .....+++..+++++.|++.|++|||+. +|+||||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 999999999999999986421 2345789999999999999999999998 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccc
Q 006982 443 DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFK 521 (623)
Q Consensus 443 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~ 521 (623)
++.+||+|||+++.+........ .....++..|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--- 242 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--- 242 (293)
T ss_pred CCeEEeCccccccccccccceec--cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH---
Confidence 99999999999987654222111 112235678999999988889999999999999999998 988886432211
Q ss_pred ccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
..+ ... ... ...........+.+++..|+. .+|++|||+.|+++.|+++.
T Consensus 243 --~~~---~~~-~~~---------~~~~~~~~~~~~~~li~~~l~-~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 --LFK---LLK-EGY---------RMEKPQNCTQELYHLMRDCWH-EVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHH---HHH-cCC---------cCCCCCCCCHHHHHHHHHHcc-cCcccCcCHHHHHHHHHHhh
Confidence 111 110 100 000011112345567778887 89999999999999999864
No 69
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2e-36 Score=308.30 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=197.4
Q ss_pred CcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeE
Q 006982 307 FSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLL 377 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 377 (623)
|...+.||+|+||.||++.. .++..||+|.+.... .....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37788999999999988652 367889999987543 2456788999999999999999999998764 35789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.. ..+++.+++.++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+++..
T Consensus 86 v~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 86 IMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeeccccccc
Confidence 9999999999999952 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
........ ......++..|+|||......++.++||||||+++|||++|+.|+...... +. ....+.........+
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~-~~~~~~~~~~~~~~~ 233 (283)
T cd05080 158 PEGHEYYR-VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FE-EMIGPKQGQMTVVRL 233 (283)
T ss_pred CCcchhhc-cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hh-hhhcccccccchhhh
Confidence 43221110 011123566799999998888999999999999999999999998643221 00 000000000001111
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
.+.++..............+.+++..|+. .+|++|||+++|+++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~-~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 234 IELLERGMRLPCPKNCPQEVYILMKNCWE-TEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhcCCCCCCCCCCCHHHHHHHHHHhc-cChhhCCCHHHHHHHHHHhh
Confidence 22222211111111112345556667777 89999999999999999874
No 70
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-36 Score=315.81 Aligned_cols=198 Identities=24% Similarity=0.385 Sum_probs=173.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|+..+.||+|+||.||++... ++..+|+|.+.... .....+.+|++++.+++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57888999999999999999965 67889999886542 2346789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.. ...+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 85 MDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 999999999963 245889999999999999999999862 59999999999999999999999999998653321
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 ------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 159 ------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred ------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 12234889999999999889999999999999999999999999653
No 71
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=303.76 Aligned_cols=263 Identities=25% Similarity=0.357 Sum_probs=195.4
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee-----eEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER-----LLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-----~lV~ 379 (623)
.|...+++|+|+||.||+|... ++..||+|+.-...+- -.+|+++|+++.|||||+++.+|....+. .+|+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 4566789999999999999964 5689999998655432 23799999999999999999988764322 4899
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeecccccccC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDFGLARLMN 458 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Dfgla~~~~ 458 (623)
||||. +|.+.++.....+..++.....-+..|+.+||+|||+. +|+||||||+|+|+|.+ |.+||+|||.|+.+.
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 99998 99999976544557788888888999999999999998 99999999999999965 999999999999988
Q ss_pred CCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC--
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG-- 535 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~-- 535 (623)
+.....+.. .|--|+|||.+.+ ..|+.+.||||.|||+.||+-|+.-|.+.+.... +...++ .+...
T Consensus 178 ~~epniSYi-----cSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ----L~eIik-~lG~Pt~ 247 (364)
T KOG0658|consen 178 KGEPNISYI-----CSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ----LVEIIK-VLGTPTR 247 (364)
T ss_pred cCCCceeEE-----EeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH----HHHHHH-HhCCCCH
Confidence 766555444 4678999999876 4699999999999999999999999987544322 111111 11100
Q ss_pred -------------chhhhhchhh---hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH--HHHHhhcc
Q 006982 536 -------------QLQDAIDKCL---VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ--FLRAIGER 589 (623)
Q Consensus 536 -------------~~~~~~d~~l---~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~--~L~~i~~~ 589 (623)
...++....+ .....+.+..+++ .+++. .+|.+|.++.|++. ..+++++.
T Consensus 248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll---~~~L~-Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLL---SKLLQ-YSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HHHhhcCcccccccCcccccccceeecccCCCHHHHHHH---HHHhc-cChhhcCCHHHHhcchhhHHhhCc
Confidence 0011111111 1111233444444 44444 99999999999874 45666655
No 72
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-36 Score=306.12 Aligned_cols=257 Identities=23% Similarity=0.379 Sum_probs=196.0
Q ss_pred ccCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.+|+..+.||+|+||.||+|.. .++..+++|.+.... .....+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3567778999999999999984 356789999987533 233578899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCC-------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC
Q 006982 378 VYKHMPNGSLYDLLHPADD-------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF 444 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~ 444 (623)
||||+++|+|.+++..... ....+++.+.+.++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999853210 123578999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccccc
Q 006982 445 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGN 523 (623)
Q Consensus 445 ~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~ 523 (623)
.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~-----~ 234 (283)
T cd05090 162 HVKISDLGLSREIYSADYYR--VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ-----E 234 (283)
T ss_pred cEEeccccccccccCCccee--cccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-----H
Confidence 99999999998754322111 1122235678999999988889999999999999999998 88888642210 1
Q ss_pred HHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 524 LVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 524 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
..+.+ ....... .....+.++ ..++..|+. .+|++||++.++.+.|..
T Consensus 235 ~~~~~----~~~~~~~------~~~~~~~~~---~~li~~cl~-~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIEMV----RKRQLLP------CSEDCPPRM---YSLMTECWQ-EGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHH----HcCCcCC------CCCCCCHHH---HHHHHHHcc-cCcccCcCHHHHHHHhhc
Confidence 11111 1111000 011123333 344456776 999999999999998864
No 73
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.5e-36 Score=315.25 Aligned_cols=192 Identities=20% Similarity=0.246 Sum_probs=167.1
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
++||+|+||.||+++.. +|+.||+|++.... .....+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 68899999987532 23356788999999999999999999999999999999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~-- 151 (323)
T cd05571 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--
Confidence 99999863 34689999999999999999999999 9999999999999999999999999999753221111
Q ss_pred ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 152 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 197 (323)
T cd05571 152 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred --ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCC
Confidence 1223489999999999998999999999999999999999999964
No 74
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.7e-36 Score=306.93 Aligned_cols=200 Identities=22% Similarity=0.295 Sum_probs=171.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|+||.||+++.+ ++..||+|++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888999999999999999975 57889999986542 234567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|++++.+..+.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999987776543 224588999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... ......|++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 154 SNA---NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred ccc---cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 211 111234789999999999888999999999999999999999999754
No 75
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.4e-36 Score=303.11 Aligned_cols=256 Identities=23% Similarity=0.404 Sum_probs=199.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CC---cEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DG---TSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|+..+.||+|+||.||+|... ++ ..+++|.+.... ...+.+..|++++.+++|||++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46778899999999999999965 33 378999886542 3356788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++++|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 85 TEYMENGALDKYLRDH---DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999998642 24689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
........ ......+..|+|||++....++.++|||||||++|||++ |+.||..... .++........
T Consensus 159 ~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~~~-- 227 (268)
T cd05063 159 DDPEGTYT-TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAINDGF-- 227 (268)
T ss_pred ccccccee-ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhcCC--
Confidence 32211111 111223567999999988889999999999999999998 9999864221 11111111100
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
......+....+.+++..|+. .+|++||++.+|++.|+++
T Consensus 228 --------~~~~~~~~~~~~~~li~~c~~-~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 --------RLPAPMDCPSAVYQLMLQCWQ-QDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --------CCCCCCCCCHHHHHHHHHHcC-CCcccCcCHHHHHHHHHhh
Confidence 000011112345677778887 9999999999999999875
No 76
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.1e-36 Score=300.66 Aligned_cols=260 Identities=20% Similarity=0.323 Sum_probs=204.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.|++|.++.. ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 56888899999999999999976 7899999988632 123567889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.........+++.+++.++.+++.|+.|||+. +++||||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999865433446689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+....... ...
T Consensus 159 ~~~~----~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~-- 225 (267)
T cd08224 159 KTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEK-CDY-- 225 (267)
T ss_pred CCcc----cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhhc-CCC--
Confidence 2111 1123478889999999888899999999999999999999999864321 11121111110 000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
...........+.+++..|+. .+|++||++.+|+++|+++.
T Consensus 226 ------~~~~~~~~~~~~~~~i~~cl~-~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 ------PPLPADHYSEELRDLVSRCIN-PDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ------CCCChhhcCHHHHHHHHHHcC-CCcccCCCHHHHHHHHHHhc
Confidence 000000111234455566776 99999999999999999874
No 77
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.3e-36 Score=316.32 Aligned_cols=257 Identities=19% Similarity=0.221 Sum_probs=195.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|+..+.||+|+||.||++... +++.||+|++.... .....+..|++++.+++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999865 68899999996532 22356788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999963 34689999999999999999999999 999999999999999999999999999976532
Q ss_pred CCCcc-------------------------------cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 006982 460 IDTHL-------------------------------STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508 (623)
Q Consensus 460 ~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~ 508 (623)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 11000 00012346899999999999989999999999999999999999
Q ss_pred CCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 509 RPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 509 ~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.||......+. ......... .+..+. .....++...++... |+...++..||+++|+++.
T Consensus 234 ~Pf~~~~~~~~--------~~~i~~~~~--~~~~p~--~~~~s~~~~~li~~l--~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 234 PPFCSETPQET--------YKKVMNWKE--TLIFPP--EVPISEKAKDLILRF--CCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCCHHHH--------HHHHHcCcC--cccCCC--cCCCCHHHHHHHHHH--cCChhhcCCCCCHHHHhCC
Confidence 99975332111 111110000 000000 011344555555443 3343556678999999875
No 78
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=286.73 Aligned_cols=262 Identities=23% Similarity=0.301 Sum_probs=203.6
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Ceee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KERL 376 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 376 (623)
.++|.+.+.+|+|||+-||.++ ..++..+|+|++.-.. .+.+..++|++..++++|||+++++++...+ .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 3578889999999999999999 6678899999986554 6677889999999999999999999987544 3589
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
++++|...|+|.+.+......+..+++.+.++|+.++++||.+||+. .|+++||||||.|||+++++.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999987666677899999999999999999999997 34699999999999999999999999999976
Q ss_pred cCCC--CCccc---ccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 457 MNPI--DTHLS---TFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 457 ~~~~--~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
..-. ..... .-......|..|+|||.+. +...++++|||||||+||+|+.|..||+.....
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~----------- 247 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ----------- 247 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-----------
Confidence 4211 00000 0011234789999999885 456789999999999999999999999743221
Q ss_pred HHHhccCchhhh-hchhh---hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 529 AQLSSTGQLQDA-IDKCL---VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 529 ~~~~~~~~~~~~-~d~~l---~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
.+.+.-. ....+ .....++.+. ++..+|++ .||.+||+..+++..++.+
T Consensus 248 -----GgSlaLAv~n~q~s~P~~~~yse~l~---~lik~mlq-vdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 -----GGSLALAVQNAQISIPNSSRYSEALH---QLIKSMLQ-VDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----CCeEEEeeeccccccCCCCCccHHHH---HHHHHHhc-CCcccCCCHHHHHHHHHhh
Confidence 1111100 11011 1112344444 44456666 9999999999999998875
No 79
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3e-36 Score=307.88 Aligned_cols=200 Identities=21% Similarity=0.333 Sum_probs=170.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|... ++..||+|.++... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999865 68899999986532 2345678999999999999999999999998899999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++ +|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 975 999988532 24578899999999999999999999 99999999999999999999999999997643221
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
. ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 158 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 158 K----TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred c----cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 1123347899999998865 568999999999999999999999997643
No 80
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5e-36 Score=301.39 Aligned_cols=254 Identities=28% Similarity=0.439 Sum_probs=202.9
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|..+++..+++|.+.......+.+.+|+..+++++|+|++++++++......++|+||+++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence 56888899999999999999988888999999987666778899999999999999999999999988899999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
++|.+++.... +..+++.++..++.+++.|+.|||+. +++|+||||+||++++++.++|+|||+++........
T Consensus 86 ~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~- 159 (261)
T cd05034 86 GSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT- 159 (261)
T ss_pred CCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhh-
Confidence 99999996532 35689999999999999999999999 9999999999999999999999999999876431111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
...+...+..|+|||.+.+..++.++||||||+++||+++ |+.||...... ........... .
T Consensus 160 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~------~ 223 (261)
T cd05034 160 --AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYR------M 223 (261)
T ss_pred --hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC------C
Confidence 1112224578999999998889999999999999999998 99998643211 11111111000 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.. ....++ .+.+++.+|+. .+|++||+++++.+.|+.
T Consensus 224 ~~-~~~~~~---~~~~~i~~~l~-~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 PR-PPNCPE---ELYDLMLQCWD-KDPEERPTFEYLQSFLED 260 (261)
T ss_pred CC-CCCCCH---HHHHHHHHHcc-cCcccCCCHHHHHHHHhc
Confidence 00 011122 34556667776 899999999999999875
No 81
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.6e-36 Score=303.48 Aligned_cols=260 Identities=19% Similarity=0.315 Sum_probs=202.1
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|++|.||++.. .++..+++|.+.... .....+.+|+++++.++|||++++++++..++..++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3577789999999999999995 578999999876432 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++.........+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999864333446789999999999999999999999 999999999999999999999999999886543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... .....++..|+|||++.+..++.++||||||+++|||++|..||...... ...+..... .
T Consensus 159 ~~~~----~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~------~ 222 (267)
T cd08229 159 KTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIE------Q 222 (267)
T ss_pred CCcc----cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhh------c
Confidence 2211 12234788999999998888999999999999999999999998643211 111111111 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
...+........++ +..++..|+. .+|++||||.+|+++++++.
T Consensus 223 ~~~~~~~~~~~~~~---~~~li~~~l~-~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 223 CDYPPLPSDHYSEE---LRQLVNMCIN-PDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCCCCcccccHH---HHHHHHHhcC-CCcccCCCHHHHHHHHhhhc
Confidence 00011111112233 3344446766 89999999999999998763
No 82
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.6e-37 Score=312.37 Aligned_cols=196 Identities=19% Similarity=0.290 Sum_probs=172.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||++... +++.||+|++.... .....+.+|++++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36788899999999999999965 68899999986432 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999863 24688999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. ....|++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~ 201 (291)
T cd05612 154 RT-------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201 (291)
T ss_pred Cc-------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11 1234889999999999888999999999999999999999999753
No 83
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.6e-36 Score=307.96 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=197.4
Q ss_pred ccCcccceeeccCccEEEEEEeCC-Cc--EEEEEEeccc--cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GT--SLMVKRLQDS--QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
++|+..++||+|+||.||+|..++ +. .+++|.++.. ....+.+.+|++++.++ +||||+++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 467888999999999999998753 33 4688887642 22345788999999999 799999999999998899999
Q ss_pred EecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 379 YKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
+||+++|+|.++++.... ....+++..++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999864321 123588999999999999999999998 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||++........ . .....+..|+|||+.....++.++|||||||++|||++ |..||......
T Consensus 159 kl~dfg~~~~~~~~~~---~--~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-------- 225 (297)
T cd05089 159 KIADFGLSRGEEVYVK---K--TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-------- 225 (297)
T ss_pred EECCcCCCccccceec---c--CCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------
Confidence 9999999864321100 0 01113567999999988889999999999999999997 99998653221
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
+........ . .... ....+.+ +.+++..|+. .+|.+||+++++++.|+++.+.+
T Consensus 226 ~~~~~~~~~-~-----~~~~-~~~~~~~---~~~li~~~l~-~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 226 ELYEKLPQG-Y-----RMEK-PRNCDDE---VYELMRQCWR-DRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHHHHHhcC-C-----CCCC-CCCCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHHhh
Confidence 111111110 0 0000 0112233 4455556776 89999999999999999987655
No 84
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-37 Score=285.62 Aligned_cols=248 Identities=25% Similarity=0.354 Sum_probs=200.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|++.+.||+|.||.||.|+. +++..||+|++.+++ ....++.+|+++-+.++||||+++++||.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 5688999999999999999994 568899999997764 34567899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||.++|++...|.... ...+++.....+..|+|.|+.|+|.. +|+||||||+|+|++..+..||+|||.+..-.
T Consensus 102 Eya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999997543 35688888999999999999999999 99999999999999999999999999997543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.....+ .+||..|.+||...+...+..+|+|++|++.||++.|..||......+.+.. +.. .+
T Consensus 176 -~~kR~t----lcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr-----I~k-------~~ 238 (281)
T KOG0580|consen 176 -SNKRKT----LCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR-----IRK-------VD 238 (281)
T ss_pred -CCCcee----eecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH-----HHH-------cc
Confidence 122222 3489999999999999999999999999999999999999986442222111 111 11
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
+.++ .....+..+++. .|.. .+|.+|.+..||++.-
T Consensus 239 ~~~p----~~is~~a~dlI~---~ll~-~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 239 LKFP----STISGGAADLIS---RLLV-KNPIERLALTEVMDHP 274 (281)
T ss_pred ccCC----cccChhHHHHHH---HHhc-cCccccccHHHHhhhH
Confidence 2222 123344444433 3444 8899999999988653
No 85
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.8e-36 Score=299.95 Aligned_cols=247 Identities=24% Similarity=0.354 Sum_probs=190.5
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
+.||+|+||.||+|... +++.+++|.+.... .....+.+|++++++++||||+++++++......++|+||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999964 78899999876432 3356789999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~ 152 (252)
T cd05084 81 LTFLRTE---GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY--AST 152 (252)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccc--ccc
Confidence 9998532 24588999999999999999999999 999999999999999999999999999986542111 111
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhh
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLV 546 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 546 (623)
......+..|+|||.+.+..++.++||||||+++|||++ |..||...... .....+.. .... . .
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-----~~~~~~~~---~~~~-~------~ 217 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-----QTREAIEQ---GVRL-P------C 217 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-----HHHHHHHc---CCCC-C------C
Confidence 111123567999999998889999999999999999998 88888542111 01111100 0000 0 0
Q ss_pred cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 547 AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 547 ~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
....+. .+.+++..|+. .+|++|||+.+|.++|+
T Consensus 218 ~~~~~~---~~~~li~~~l~-~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPD---AVYRLMERCWE-YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHHh
Confidence 011122 44555567776 99999999999999886
No 86
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.3e-36 Score=302.01 Aligned_cols=256 Identities=23% Similarity=0.373 Sum_probs=195.2
Q ss_pred CcccceeeccCccEEEEEEeCC----CcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe-----
Q 006982 307 FSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE----- 374 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 374 (623)
|...+.||+|+||.||+|.... +..||+|+++... .....+.+|++.++.++|||++++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998642 3679999987543 234578899999999999999999998876554
Q ss_pred -eeEEEecCCCCCHhhhccCCCC--CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 375 -RLLVYKHMPNGSLYDLLHPADD--TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 375 -~~lV~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
.++++||+++|+|..++..... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 6899999999999999854321 224689999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
|+++.......... .....++..|+|||++....++.++||||||+++|||++ |..||...... +....
T Consensus 158 g~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--------~~~~~ 227 (273)
T cd05035 158 GLSKKIYSGDYYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--------EIYDY 227 (273)
T ss_pred cceeeccccccccc--cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH
Confidence 99987644322111 111224678999999988889999999999999999999 88888643211 11111
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
....... .. ..... ..+.+++..|+. .||++||++.||++.|+++
T Consensus 228 ~~~~~~~-~~------~~~~~---~~~~~li~~~l~-~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 228 LRHGNRL-KQ------PEDCL---DELYDLMYSCWR-ADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHcCCCC-CC------CcCCC---HHHHHHHHHHcC-CChhhCcCHHHHHHHHHhh
Confidence 1111000 00 01122 245555566777 9999999999999999875
No 87
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.1e-37 Score=319.04 Aligned_cols=195 Identities=20% Similarity=0.301 Sum_probs=172.6
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|+.. +++.||+|.+.... ...+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46888899999999999999965 68899999986532 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999863 24578888999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
... ...||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 171 ~~~-------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 171 RTF-------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred Ccc-------eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 211 12489999999999998899999999999999999999999965
No 88
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.4e-36 Score=304.81 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=196.8
Q ss_pred hccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
.++|...+.||+|++|.||+|...+ +..|++|.+.... .....+..|+.++++++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4568888999999999999999753 5678899876432 2345689999999999999999999999999899
Q ss_pred eEEEecCCCCCHhhhccCCCC---CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC---CeEEe
Q 006982 376 LLVYKHMPNGSLYDLLHPADD---TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF---EPKIS 449 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~---~~kl~ 449 (623)
++|+||+++|+|.++++.... ....++|..++.++.|++.|++|||+. +++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEec
Confidence 999999999999999865432 123589999999999999999999999 999999999999998654 59999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHH
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~ 528 (623)
|||+++.+....... .......+..|+|||++.+..++.++|||||||++|||++ |+.||...... +..
T Consensus 162 dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~~ 231 (277)
T cd05036 162 DFGMARDIYRASYYR--KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EVM 231 (277)
T ss_pred cCccccccCCcccee--cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHH
Confidence 999998763322111 1111223568999999998889999999999999999997 99998753221 111
Q ss_pred HHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
......... . . ....+ ..+.+++..|+. .+|++||++.+|++.|+
T Consensus 232 ~~~~~~~~~-~-----~-~~~~~---~~~~~~i~~cl~-~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 232 EFVTGGGRL-D-----P-PKGCP---GPVYRIMTDCWQ-HTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHcCCcC-C-----C-CCCCC---HHHHHHHHHHcC-CCcccCcCHHHHHHHhh
Confidence 111111000 0 0 01112 245556667877 89999999999999886
No 89
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.8e-36 Score=307.70 Aligned_cols=261 Identities=25% Similarity=0.409 Sum_probs=200.1
Q ss_pred hccCcccceeeccCccEEEEEEe--------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL--------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK 372 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 372 (623)
..+|...+.||+|+||.||++.. .++..|++|.+.... .....+.+|+.++..+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 35677889999999999999974 134579999886532 3346788999999999 899999999999999
Q ss_pred CeeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL 440 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl 440 (623)
...++||||+++|+|.+++..... ....++|.+++.++.|++.||.|||+. +++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence 999999999999999999865321 124578999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccc
Q 006982 441 DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519 (623)
Q Consensus 441 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~ 519 (623)
++++.+||+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---- 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYK--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 244 (304)
T ss_pred cCCCcEEECCCccceecccccccc--cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----
Confidence 999999999999998764322211 1112235678999999988889999999999999999998 777875421
Q ss_pred ccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 520 FKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
..++.......... . .......+ +..++..|+. .+|++||++.|+++.|+++..
T Consensus 245 ----~~~~~~~~~~~~~~-~------~~~~~~~~---~~~li~~cl~-~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 245 ----VEELFKLLKEGHRM-D------KPANCTNE---LYMMMRDCWH-AIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred ----HHHHHHHHHcCCcC-C------CCCCCCHH---HHHHHHHHcc-cChhhCCCHHHHHHHHHHHHH
Confidence 11222211111100 0 01112233 4445556776 899999999999999998754
No 90
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.1e-36 Score=327.87 Aligned_cols=252 Identities=18% Similarity=0.201 Sum_probs=194.4
Q ss_pred cCcccceeeccCccEEEEEEeC-C-CcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-D-GTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.|...+.||+|++|.||+|... + +..|++|.+.... .....+..|++++..++|||||++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3778899999999999999854 3 5678888764433 33456778999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.++++........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999998864333345688999999999999999999999 999999999999999999999999999987643211
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. .......||++|+|||++.+..++.++|||||||++|||++|+.||..... .+........ .. .
T Consensus 225 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~~-~~----~ 289 (478)
T PTZ00267 225 L--DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLYG-KY----D 289 (478)
T ss_pred c--ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC-CC----C
Confidence 1 112234589999999999999999999999999999999999999964321 1111111111 00 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+ .......++. .++..|+. .+|++||++.+++.
T Consensus 290 ~--~~~~~s~~~~---~li~~~L~-~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 P--FPCPVSSGMK---ALLDPLLS-KNPALRPTTQQLLH 322 (478)
T ss_pred C--CCccCCHHHH---HHHHHHhc-cChhhCcCHHHHHh
Confidence 0 0011223333 44445666 99999999999864
No 91
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.6e-36 Score=300.10 Aligned_cols=253 Identities=26% Similarity=0.429 Sum_probs=200.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||++...++..+++|.+.........+.+|++++++++|+|++++.+++.+ ...++++||+++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 4677889999999999999998888889999987665556788999999999999999999999887 678999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... +..+++.+++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+.........
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 158 (260)
T cd05073 85 GSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT- 158 (260)
T ss_pred CcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-
Confidence 99999996532 35688999999999999999999998 9999999999999999999999999999865432111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
......++..|+|||++....++.++|+|||||++||+++ |+.||...... .+..+... .....
T Consensus 159 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~----~~~~~---- 223 (260)
T cd05073 159 --AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALER----GYRMP---- 223 (260)
T ss_pred --cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHhC----CCCCC----
Confidence 1112235678999999998889999999999999999999 89898643221 11111111 00000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.....+. .+..++.+|+. .+|++||++.++.+.|+.
T Consensus 224 --~~~~~~~---~~~~~i~~~l~-~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 --RPENCPE---ELYNIMMRCWK-NRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CcccCCH---HHHHHHHHHcc-cCcccCcCHHHHHHHHhc
Confidence 0011222 34555567776 999999999999999975
No 92
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.2e-36 Score=312.52 Aligned_cols=190 Identities=25% Similarity=0.298 Sum_probs=166.1
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||.||++... ++..||+|++... ......+.+|++++.+++||||+++++++.+.+..++|+||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999965 5788999998643 22345678899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||+++........
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---- 149 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK---- 149 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc----
Confidence 999963 24589999999999999999999999 9999999999999999999999999999864322111
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence 1223589999999999999999999999999999999999999975
No 93
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=311.49 Aligned_cols=263 Identities=22% Similarity=0.345 Sum_probs=208.3
Q ss_pred cCcccceeeccCccEEEEEEeCCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.....++||+|-||.|..+....+..||||.++... ....+|.+|+++|.+++|||||.++|+|..++..++|+|||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 345567899999999999999888999999998754 345789999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++...... ...-....+|+.|||.||+||.+. +++||||.++|+|+|.++++||+|||+++-+...+++
T Consensus 619 nGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 619 NGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred cCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCce
Confidence 99999999765432 245566788999999999999998 9999999999999999999999999999977655443
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT--GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt--g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ...+-+.+|||||.+.-+++|.++|||+||+.+||+++ ...||....+. ...+-...+.+....+..+
T Consensus 694 ~vq--gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e-----~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 694 RVQ--GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE-----QVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred eee--cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH-----HHHHhhhhhcCCCCcceec
Confidence 221 11234689999999999999999999999999999886 77788654332 2233333333332222111
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
. +....+. .+.++.+.|+. .|-++||+++++...|++..
T Consensus 767 ~---~P~~cp~---~lyelml~Cw~-~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 767 S---RPPACPQ---GLYELMLRCWR-RESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred c---CCCcCcH---HHHHHHHHHhc-hhhhcCCCHHHHHHHHHHhc
Confidence 1 1111233 44577788987 88999999999999998653
No 94
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.2e-36 Score=309.05 Aligned_cols=261 Identities=25% Similarity=0.399 Sum_probs=199.3
Q ss_pred ccCcccceeeccCccEEEEEEeC--------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKK 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 373 (623)
++|.+.+.||+|+||.||++... ++..+|+|.+.... .....+..|++++.++ +||||+++++++....
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56888999999999999999752 23569999987542 2345688899999999 7999999999999999
Q ss_pred eeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
..++|+||+++|+|.+++..... ....++|.++++++.|++.||+|||+. +++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence 99999999999999999965322 123589999999999999999999998 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccc
Q 006982 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF 520 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~ 520 (623)
+++.+||+|||+++........... ....+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---- 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKT--TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---- 248 (307)
T ss_pred CCCcEEECCCcccccccccchhhcc--ccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH----
Confidence 9999999999999865432111111 11124568999999988889999999999999999998 8888754211
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.+...... .....+. ...... .+.+++..|+. .+|++||++.+|++.|+++.+.
T Consensus 249 ----~~~~~~~~-~~~~~~~------~~~~~~---~~~~li~~~l~-~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 ----EELFKLLK-EGHRMDK------PSNCTN---ELYMMMRDCWH-AVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ----HHHHHHHH-cCCCCCC------CCcCCH---HHHHHHHHHcc-cChhhCcCHHHHHHHHHHHHHH
Confidence 11111111 1100000 011223 34445567777 8999999999999999998654
No 95
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.1e-36 Score=310.69 Aligned_cols=198 Identities=23% Similarity=0.384 Sum_probs=172.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|+..+.||+|+||.||++... ++..+++|.+.... .....+.+|++++.+++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 57888999999999999999965 67888999876532 2345788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.. ...+++.....++.+++.||.|||+.. +|+||||||+|||+++++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 85 MDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred CCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 999999999953 245788999999999999999999752 69999999999999999999999999997653211
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 ------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 159 ------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 12234789999999999888999999999999999999999999753
No 96
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1e-35 Score=301.00 Aligned_cols=255 Identities=21% Similarity=0.346 Sum_probs=191.5
Q ss_pred cccceeeccCccEEEEEEeCCC-c--EEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------Cee
Q 006982 308 SKNNIIGSGRTGTMYKALLEDG-T--SLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------KER 375 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~~~-~--~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 375 (623)
...+.||+|+||.||+|...+. . .+|+|.++.. ....+.+..|++++.+++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4568899999999999997543 2 5899988654 23346788899999999999999999987542 245
Q ss_pred eEEEecCCCCCHhhhccCCC--CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 376 LLVYKHMPNGSLYDLLHPAD--DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
++++||+++|+|.+++.... .....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999999874322 1234589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHh
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLS 532 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~ 532 (623)
++......... ......+++.|+|||+.....++.++||||||+++|||++ |+.||...... +......
T Consensus 159 ~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~ 228 (272)
T cd05075 159 SKKIYNGDYYR--QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--------EIYDYLR 228 (272)
T ss_pred ccccCccccee--cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHH
Confidence 98764322111 1111235678999999998899999999999999999999 78888642211 1111111
Q ss_pred ccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 533 STGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 533 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
.. .... ......+ .+.+++..|+. .+|++|||+.++++.|+++
T Consensus 229 ~~-~~~~------~~~~~~~---~~~~li~~~l~-~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 QG-NRLK------QPPDCLD---GLYSLMSSCWL-LNPKDRPSFETLRCELEKA 271 (272)
T ss_pred cC-CCCC------CCCCCCH---HHHHHHHHHcC-CCcccCcCHHHHHHHHHhh
Confidence 11 1000 0011222 34555667776 9999999999999999874
No 97
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.9e-36 Score=305.48 Aligned_cols=266 Identities=24% Similarity=0.355 Sum_probs=196.6
Q ss_pred ccCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Ceee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 376 (623)
.+|...+.||+|+||.||++.. .++..|++|++.... ...+.+.+|++++.+++|||++++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4677789999999999999974 357889999986543 3356788999999999999999999987543 4578
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+++|+|.+++... ...++|..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccccc
Confidence 999999999999999643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC-
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG- 535 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~- 535 (623)
.......... .....++..|+|||++.+..++.++|||||||++|||++|..|+...... +........
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---------~~~~~~~~~~ 227 (284)
T cd05081 158 LPQDKEYYKV-REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---------FMRMMGNDKQ 227 (284)
T ss_pred ccCCCcceee-cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---------hhhhcccccc
Confidence 6432221111 11112345699999998888999999999999999999988776432110 000000000
Q ss_pred ------chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 536 ------QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 536 ------~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
.+.+.+...............+.+++..|+. .+|++|||+.||++.|+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~-~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWN-NDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcc-CChhhCCCHHHHHHHHHhcC
Confidence 0011111100000001111245566667887 99999999999999998763
No 98
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1e-35 Score=297.16 Aligned_cols=246 Identities=24% Similarity=0.365 Sum_probs=193.2
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHh
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLY 388 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 388 (623)
++||+|+||.||+|...++..+++|.+.... .....+.+|++++.+++|||++++++++......++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999998889999999986543 23456889999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccc
Q 006982 389 DLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468 (623)
Q Consensus 389 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 468 (623)
+++... ...+++..++.++.+++.+|.|||+. +++||||||+||++++++.+||+|||++...........
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~--- 151 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS--- 151 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccC---
Confidence 998543 24578999999999999999999998 999999999999999999999999999975432211111
Q ss_pred cCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 469 NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 469 ~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
....+++.|+|||+..+..++.++||||||+++||+++ |..||...... ............
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~~~~---------- 213 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKGYRM---------- 213 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCCCC----------
Confidence 11224678999999998889999999999999999998 99998643221 101111110000
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 548 KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 548 ~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.........+..++..|+. .+|++||++.|+++.|.
T Consensus 214 ~~~~~~~~~~~~li~~~l~-~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 SCPQKCPDDVYKVMQRCWD-YKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCCHHHHHHHHHHcc-cCcccCCCHHHHHHHhc
Confidence 0001112345666778887 89999999999999875
No 99
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1e-35 Score=298.36 Aligned_cols=250 Identities=27% Similarity=0.454 Sum_probs=199.5
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||+|... ++.|++|.+.......+++.+|+.++++++|+|++++++++.+....++|+||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 46778899999999999999875 78899999987655567899999999999999999999999988899999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
++|.+++.... ...++|..+..++.|++.|+.|||+. +++|+||||+||++++++.++|+|||.++.......
T Consensus 85 ~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 85 GSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 99999996432 23689999999999999999999999 999999999999999999999999999987632111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
....+..|+|||++....++.++||||||+++||+++ |..||...... .+...+.. ......
T Consensus 158 -----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~----~~~~~~--- 220 (256)
T cd05039 158 -----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPHVEK----GYRMEA--- 220 (256)
T ss_pred -----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHhc----CCCCCC---
Confidence 1224678999999988889999999999999999997 99998643211 11111110 000000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
....+++ +.+++..|+. .+|++||++.|++++|+.+
T Consensus 221 ---~~~~~~~---~~~li~~~l~-~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 ---PEGCPPE---VYKVMKDCWE-LDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ---ccCCCHH---HHHHHHHHhc-cChhhCcCHHHHHHHHhcC
Confidence 0112233 4445556776 8999999999999999754
No 100
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.7e-36 Score=308.74 Aligned_cols=260 Identities=26% Similarity=0.445 Sum_probs=198.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCc--EEEEEEeccc--cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGT--SLMVKRLQDS--QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
++|+..+.||+|+||.||+|... ++. .+++|.++.. ......+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 56788899999999999999964 454 4577776543 23345788999999999 899999999999999999999
Q ss_pred EecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 379 YKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
+||+++|+|.++++.... ....+++.+++.++.|++.|++|||+. +++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999864321 124688999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
||+|||+++...... .. .....+..|+|||++....++.++|||||||++|||+| |..||......
T Consensus 164 kl~dfg~~~~~~~~~---~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------- 230 (303)
T cd05088 164 KIADFGLSRGQEVYV---KK--TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------- 230 (303)
T ss_pred EeCccccCcccchhh---hc--ccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------
Confidence 999999986432110 00 11124567999999988889999999999999999998 99998643221
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
+........... . .....+. .+.+++.+|+. .+|++||++++++..|+++.+...
T Consensus 231 ~~~~~~~~~~~~-~------~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 231 ELYEKLPQGYRL-E------KPLNCDD---EVYDLMRQCWR-EKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HHHHHHhcCCcC-C------CCCCCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHHHHHHHhhh
Confidence 111111100000 0 0001122 34556667877 999999999999999998755543
No 101
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.5e-36 Score=302.63 Aligned_cols=258 Identities=24% Similarity=0.424 Sum_probs=199.0
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCc----EEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGT----SLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|.+ .++. .||+|.+.... .....+.+|+.++..+.|||++++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 4678889999999999999985 3444 47999886532 335678899999999999999999999875 45779
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
++||+++|+|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 86 VTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeec
Confidence 99999999999999643 24689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....... ...+..++..|+|||...+..++.++|||||||++|||++ |..||..... ..+..++......
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~-- 230 (279)
T cd05109 160 DIDETEY--HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REIPDLLEKGERL-- 230 (279)
T ss_pred cccccee--ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCCCcC--
Confidence 4322211 1112235678999999988889999999999999999998 8888864221 1122222211000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
.. ...... .+.+++..|+. .||++||++.|+++.|+++..++
T Consensus 231 --~~------~~~~~~---~~~~li~~~l~-~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 231 --PQ------PPICTI---DVYMIMVKCWM-IDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --CC------CccCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHHHHhhcCC
Confidence 00 011222 34556667887 99999999999999999887655
No 102
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.6e-36 Score=310.96 Aligned_cols=192 Identities=21% Similarity=0.254 Sum_probs=166.8
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
+.||+|+||.||++... +|..||+|.+.... .....+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999954 68999999987532 23346778999999999999999999999999999999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-- 151 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc--
Confidence 99998853 34689999999999999999999999 9999999999999999999999999998753221111
Q ss_pred ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 152 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 197 (323)
T cd05595 152 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 197 (323)
T ss_pred --cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCC
Confidence 1223489999999999988999999999999999999999999964
No 103
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.7e-36 Score=314.92 Aligned_cols=246 Identities=24% Similarity=0.380 Sum_probs=185.8
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4556788999999999999965 68999999986533 23467889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+.. ..++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 155 ~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 155 DGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 999986543 245677888999999999999999 999999999999999999999999999987643211
Q ss_pred cccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 463 HLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
......||..|+|||++.. ...+.++|||||||++|||++|+.||...... ..............
T Consensus 224 ----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~- 293 (353)
T PLN00034 224 ----PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-----DWASLMCAICMSQP- 293 (353)
T ss_pred ----cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhccCC-
Confidence 1123458999999998743 23456899999999999999999999732211 11111111000000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. .......++. +++..|+. .||++||++.|+++.
T Consensus 294 -----~~-~~~~~~~~l~---~li~~~l~-~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 -----PE-APATASREFR---HFISCCLQ-REPAKRWSAMQLLQH 328 (353)
T ss_pred -----CC-CCCccCHHHH---HHHHHHcc-CChhhCcCHHHHhcC
Confidence 00 0111233333 44446766 999999999999874
No 104
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.1e-35 Score=333.70 Aligned_cols=264 Identities=20% Similarity=0.261 Sum_probs=199.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46888999999999999999965 58899999986532 23457899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCC-------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 380 KHMPNGSLYDLLHPAD-------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~-------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
||+++|+|.+++.... .....+++..+++++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885321 1123467888999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcc--------------cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc
Q 006982 453 LARLMNPIDTHL--------------STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE 518 (623)
Q Consensus 453 la~~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~ 518 (623)
+++......... ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998762111000 011112358999999999999999999999999999999999999996522110
Q ss_pred cccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-CHHHHHHHHHHhhc
Q 006982 519 TFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERP-TMFEVYQFLRAIGE 588 (623)
Q Consensus 519 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-s~~ev~~~L~~i~~ 588 (623)
. . ........ .+. . .....+.. +.+++.+|+. .||++|| +++++.+.|+...+
T Consensus 239 i-----~-~~~~i~~P---~~~-~---p~~~iP~~---L~~LI~rcL~-~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 I-----S-YRDVILSP---IEV-A---PYREIPPF---LSQIAMKALA-VDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred h-----h-hhhhccCh---hhc-c---ccccCCHH---HHHHHHHHcc-CChhhCcCHHHHHHHHHHHHHh
Confidence 0 0 00000000 000 0 00112223 3445566776 9999995 67778888887644
No 105
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.6e-36 Score=306.83 Aligned_cols=200 Identities=22% Similarity=0.321 Sum_probs=169.4
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++++++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367888999999999999999965 68899999986543 233467789999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 996 5888877532 24578889999999999999999999 9999999999999999999999999999754321
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. ......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||...
T Consensus 157 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 157 SH----TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred Cc----cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 1123457899999998865 45788999999999999999999999753
No 106
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.3e-36 Score=311.34 Aligned_cols=192 Identities=18% Similarity=0.249 Sum_probs=164.8
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||++... +++.+|+|+++... .....+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 67899999987532 2334577888888766 899999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~- 152 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT- 152 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc-
Confidence 999998853 24689999999999999999999999 9999999999999999999999999999753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 153 ---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ---cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 1223489999999999999999999999999999999999999964
No 107
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.4e-36 Score=307.63 Aligned_cols=199 Identities=24% Similarity=0.342 Sum_probs=163.8
Q ss_pred cCcccceeeccCccEEEEEEeC--CCcEEEEEEecccc---ccHHHHHHHHHHhCCC---CCCCCcceeEEEEe-----C
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE--DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSV---KNRNLVPLLGFCMA-----K 372 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~ 372 (623)
+|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++.++ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6888899999999999999863 46789999886432 2234455676665554 79999999999853 3
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
...++|+||++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 45789999996 59999986432 24588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
+++...... ......||+.|+|||.+....++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 213 (290)
T cd07862 156 LARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 213 (290)
T ss_pred ceEeccCCc-----ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence 998654321 1123348899999999988889999999999999999999999997643
No 108
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-35 Score=309.64 Aligned_cols=249 Identities=17% Similarity=0.235 Sum_probs=188.9
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++||+|+||.||++... ++..||+|+++... .....+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999965 68899999997532 2234577899999888 799999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~- 152 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT- 152 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCc-
Confidence 999998853 24689999999999999999999999 9999999999999999999999999999753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......++...........
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 223 (329)
T cd05588 153 ---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------ 223 (329)
T ss_pred ---cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------
Confidence 12234899999999999989999999999999999999999999753332211222223322222111110
Q ss_pred hhcCCCHHHHHHHHHHHhhccCCCCCCCCCC------HHHHHH
Q 006982 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPT------MFEVYQ 581 (623)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs------~~ev~~ 581 (623)
+ ......++.+ ++..|+. .||.+||+ +.|+++
T Consensus 224 ~-p~~~~~~~~~---li~~~L~-~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 I-PRSLSVKASS---VLKGFLN-KDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred C-CCCCCHHHHH---HHHHHhc-cCHHHcCCCCCCCCHHHHhc
Confidence 0 1112333333 3345555 99999997 556653
No 109
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.7e-36 Score=311.55 Aligned_cols=241 Identities=18% Similarity=0.236 Sum_probs=189.0
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
++||+|+||.||++... ++..||+|++.... .....+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999954 68999999996532 23456788999999999999999999999999999999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~-- 151 (328)
T cd05593 81 ELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT-- 151 (328)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc--
Confidence 99998853 34689999999999999999999999 9999999999999999999999999998754321111
Q ss_pred ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhh
Q 006982 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCL 545 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 545 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +........ . ..+
T Consensus 152 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~~-~------~~~ 214 (328)
T cd05593 152 --MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILME-D------IKF 214 (328)
T ss_pred --cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhccC-C------ccC
Confidence 12234899999999999888999999999999999999999999653221 111111110 0 000
Q ss_pred hcCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 006982 546 VAKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQF 582 (623)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~~ 582 (623)
. .....++.+++ ..|+. .||++|| ++.|+++.
T Consensus 215 p-~~~~~~~~~li---~~~L~-~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 P-RTLSADAKSLL---SGLLI-KDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred C-CCCCHHHHHHH---HHHcC-CCHHHcCCCCCCCHHHHhcC
Confidence 0 11234444444 35555 9999997 88888754
No 110
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.5e-36 Score=311.62 Aligned_cols=200 Identities=22% Similarity=0.368 Sum_probs=166.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-----eee
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK-----ERL 376 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 376 (623)
+|...+.||+|+||.||+|... ++..||+|++.... .....+.+|++++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4777899999999999999954 68999999986432 23456889999999999999999999886432 478
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||++ ++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 689998853 34589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 153 AFNDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred cccccCc-cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 4321111 111223458999999999865 67899999999999999999999999754
No 111
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.8e-36 Score=327.59 Aligned_cols=256 Identities=23% Similarity=0.286 Sum_probs=197.3
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-----
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK----- 373 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 373 (623)
..++|...+.||+|+||+||+++. .+++.||+|++.... .....+.+|+..+..++|+|++++...+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346899999999999999999985 478999999986542 23456788999999999999999888765432
Q ss_pred ---eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEee
Q 006982 374 ---ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450 (623)
Q Consensus 374 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~D 450 (623)
..++||||+++|+|.++++........+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 25799999999999999975444456789999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHH
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.+..
T Consensus 187 FGls~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--------~~~~~~ 256 (496)
T PTZ00283 187 FGFSKMYAATVSD--DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--------EEVMHK 256 (496)
T ss_pred cccCeeccccccc--cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHH
Confidence 9999875432111 111234589999999999999999999999999999999999999964321 122222
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.... .. ++ + .....+++. .++..|+. .+|++||++.++++.
T Consensus 257 ~~~~-~~----~~-~-~~~~~~~l~---~li~~~L~-~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAG-RY----DP-L-PPSISPEMQ---EIVTALLS-SDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcC-CC----CC-C-CCCCCHHHH---HHHHHHcc-cChhhCcCHHHHHhC
Confidence 1111 00 00 0 111233333 44445665 899999999999864
No 112
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.1e-35 Score=298.07 Aligned_cols=251 Identities=22% Similarity=0.389 Sum_probs=200.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
.+|+..+.||+|+||.||++.+.++..+++|.+.........+.+|++++++++|||++++++++......++|+||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 35677889999999999999987788999999877666677899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... ..+++..++.++.+++.|++|||+. +++|+||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 155 (256)
T cd05112 84 GCLSDYLRAQR---GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-- 155 (256)
T ss_pred CcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc--
Confidence 99999986432 3578999999999999999999999 999999999999999999999999999986533211
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
....+..++.+|+|||++.+..++.++||||||+++|||++ |+.||..... ........... ....+
T Consensus 156 -~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~---~~~~~ 223 (256)
T cd05112 156 -TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINAGF---RLYKP 223 (256)
T ss_pred -cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHhCCC---CCCCC
Confidence 11122235678999999998889999999999999999998 8999864221 11121111100 00011
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.... ..+.+++.+|+. .+|++||++.||+++|
T Consensus 224 ----~~~~---~~~~~l~~~~l~-~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 ----RLAS---QSVYELMQHCWK-ERPEDRPSFSLLLHQL 255 (256)
T ss_pred ----CCCC---HHHHHHHHHHcc-cChhhCCCHHHHHHhh
Confidence 1112 345666778887 8999999999999887
No 113
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=303.18 Aligned_cols=254 Identities=22% Similarity=0.263 Sum_probs=193.2
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccc---------------cHHHHHHHHHHhCCCCCCCCccee
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQR---------------SEKEFVAEMATLGSVKNRNLVPLL 366 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------------~~~~~~~e~~~l~~l~h~niv~l~ 366 (623)
.-+.|.....||+|.||.|-+|+. .+++.||+|++.+... ..+...+||.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346788899999999999999995 4799999999964321 124678999999999999999999
Q ss_pred EEEEeC--CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC
Q 006982 367 GFCMAK--KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF 444 (623)
Q Consensus 367 ~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~ 444 (623)
.+..+. +..|||+|||..|.+...-. ....++..++++++.++..||+|||.+ +|+||||||+|+||+++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~----d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPP----DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCC----CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 998765 57899999999998876542 223399999999999999999999999 999999999999999999
Q ss_pred CeEEeecccccccCCCC-CcccccccCCCCcccccCcccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCccc
Q 006982 445 EPKISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLV----ATPKGDVYSFGTVLLELVTGERPTNVAKAPET 519 (623)
Q Consensus 445 ~~kl~Dfgla~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DV~sfGvil~elltg~~P~~~~~~~~~ 519 (623)
++||+|||.+....... ...........||+.|+|||...++. .+.+.||||+||.||-|+.|+.||.+....+.
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 99999999998653321 11122334467999999999887632 35689999999999999999999976432211
Q ss_pred ccccHHHHHHHHhccCchhhhhchhhhcC-C--CHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 520 FKGNLVEWIAQLSSTGQLQDAIDKCLVAK-G--VDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~-~--~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
+ ..++...|... . ..+++..+++- ++..||+.|.+..+|....-
T Consensus 328 ~-----------------~KIvn~pL~fP~~pe~~e~~kDli~~----lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 328 F-----------------DKIVNDPLEFPENPEINEDLKDLIKR----LLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred H-----------------HHHhcCcccCCCcccccHHHHHHHHH----HhhcChhheeehhhheecce
Confidence 1 12222223211 1 12333334333 33389999999998876553
No 114
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.1e-35 Score=297.75 Aligned_cols=249 Identities=25% Similarity=0.384 Sum_probs=197.5
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|++|.||++..+ ++..|++|.+... ......+.+|++++++++|||++++++++.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999965 6889999988643 23456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.++++... ...+++..++.++.+++.||.|||+. +++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99999999997532 35689999999999999999999998 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ....+++.|+|||+..+..++.++||||||+++|||++|+.||...... .. ...... .....+
T Consensus 156 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~---~~~~~~-~~~~~~- 221 (256)
T cd08529 156 NFA----NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----AL---ILKIIR-GVFPPV- 221 (256)
T ss_pred chh----hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----HH---HHHHHc-CCCCCC-
Confidence 211 2234788999999999888999999999999999999999999653211 11 111110 000000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....-..+.+++.+|+. .+|++||++.++++.
T Consensus 222 --------~~~~~~~~~~~i~~~l~-~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 --------SQMYSQQLAQLIDQCLT-KDYRQRPDTFQLLRN 253 (256)
T ss_pred --------ccccCHHHHHHHHHHcc-CCcccCcCHHHHhhC
Confidence 00111235556667877 899999999999863
No 115
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-36 Score=322.29 Aligned_cols=256 Identities=20% Similarity=0.211 Sum_probs=193.6
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.|...+.||+|+||+||+|+. .++..||+|++.... .....+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577889999999999999985 468899999996532 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999863 24578888999999999999999999 9999999999999999999999999998643110
Q ss_pred CCc-------------------------------------------ccccccCCCCcccccCcccccCCCCCcchhHHHH
Q 006982 461 DTH-------------------------------------------LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSF 497 (623)
Q Consensus 461 ~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sf 497 (623)
... .........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 000 0000112358999999999998889999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHH
Q 006982 498 GTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMF 577 (623)
Q Consensus 498 Gvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ 577 (623)
||++|||++|+.||......+. ............+ + .......+...+++-. .|. ..+|..||+++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~--~--~~~~~s~~~~dli~~l-l~~-~~~~~~R~~~~ 300 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTET--------QLKVINWENTLHI--P--PQVKLSPEAVDLITKL-CCS-AEERLGRNGAD 300 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHH--------HHHHHccccccCC--C--CCCCCCHHHHHHHHHH-ccC-cccccCCCCHH
Confidence 9999999999999975432111 0000000000000 0 0011345555555442 243 47778899999
Q ss_pred HHHHH
Q 006982 578 EVYQF 582 (623)
Q Consensus 578 ev~~~ 582 (623)
|++..
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99864
No 116
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-35 Score=298.00 Aligned_cols=249 Identities=24% Similarity=0.399 Sum_probs=193.0
Q ss_pred ceeeccCccEEEEEEeCC----CcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLED----GTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|.... +..+++|.+..... ..+.+.+|++++.++.|||++++++++. .+..++|+||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999998532 26899999876543 4567899999999999999999999876 4467899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++... ..+++..++.++.|++.|++|||+. +++|+||||+||++++++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKR----REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9999999632 3689999999999999999999999 99999999999999999999999999998764432221
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.. .....++..|+|||...+..++.++||||||+++|||++ |..||..... ..+..++.. ....
T Consensus 153 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~~---~~~~------ 217 (257)
T cd05060 153 RA-TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLES---GERL------ 217 (257)
T ss_pred cc-ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHc---CCcC------
Confidence 11 112224568999999998889999999999999999998 9999864321 112222211 1000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
......+ ..+.+++.+|+. .+|++||++.++++.|+++.
T Consensus 218 -~~~~~~~---~~l~~li~~cl~-~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 -PRPEECP---QEIYSIMLSCWK-YRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -CCCCCCC---HHHHHHHHHHhc-CChhhCcCHHHHHHHHHhcc
Confidence 0111122 244566667877 89999999999999999764
No 117
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.4e-36 Score=304.04 Aligned_cols=256 Identities=20% Similarity=0.337 Sum_probs=196.3
Q ss_pred cCcccceeeccCccEEEEEEeC------CCcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
+|...+.||+|+||.||+|... ++..||+|++..... ....+.+|+.++.+++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3566788999999999999853 257899999975432 23568899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCC------------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC
Q 006982 378 VYKHMPNGSLYDLLHPAD------------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~ 445 (623)
++||+++++|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999984211 1123588899999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccH
Q 006982 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNL 524 (623)
Q Consensus 446 ~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l 524 (623)
+||+|||+++........ .......+++.|+|||++....++.++||||||+++|||++ |..||.....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------- 232 (283)
T cd05091 163 VKISDLGLFREVYAADYY--KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 232 (283)
T ss_pred eEecccccccccccchhe--eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 999999999865432211 11122335788999999988889999999999999999998 7778764211
Q ss_pred HHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 525 VEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 525 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.++....... ..... .....++ +..++..|+. .+|++||++++|+..|+.
T Consensus 233 ~~~~~~i~~~-~~~~~------~~~~~~~---~~~li~~cl~-~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNR-QVLPC------PDDCPAW---VYTLMLECWN-EFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcC-CcCCC------CCCCCHH---HHHHHHHHhC-CCcccCCCHHHHHHHhhC
Confidence 1222211111 11000 1112333 4455667887 999999999999999864
No 118
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=317.51 Aligned_cols=196 Identities=21% Similarity=0.315 Sum_probs=171.8
Q ss_pred ccCcccceeeccCccEEEEEEeCC--CcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED--GTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|...+ +..||+|++.... .....+.+|++++..++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468888999999999999998543 3689999986432 2345678899999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 110 ~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 999999999999963 34688999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 183 ~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 231 (340)
T PTZ00426 183 TRT-------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN 231 (340)
T ss_pred CCc-------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC
Confidence 311 1234899999999999888999999999999999999999999753
No 119
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-35 Score=297.89 Aligned_cols=247 Identities=21% Similarity=0.397 Sum_probs=189.1
Q ss_pred eeccCccEEEEEEeC---CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE---DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++.. ...++|+||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCH
Confidence 899999999999754 35579999886543 234568899999999999999999998864 567899999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++... ...+++..+++++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++...........
T Consensus 82 ~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~- 154 (257)
T cd05115 82 NKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA- 154 (257)
T ss_pred HHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec-
Confidence 9998632 24689999999999999999999999 9999999999999999999999999999865432221111
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhh
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLV 546 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 546 (623)
.....++..|+|||++....++.++||||||+++||+++ |..||...... ++......... .+ .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~~-~~------~ 219 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMSFIEQGKR-LD------C 219 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCCCC-CC------C
Confidence 111224578999999988889999999999999999996 99998653221 11111111000 00 0
Q ss_pred cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 547 AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 547 ~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
.....+ ++.+++..|+. .+|++||++.+|.+.|+.+
T Consensus 220 ~~~~~~---~l~~li~~c~~-~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPP---EMYALMKDCWI-YKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHHhhh
Confidence 011233 34455667887 8999999999999998864
No 120
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1e-35 Score=316.26 Aligned_cols=260 Identities=22% Similarity=0.332 Sum_probs=198.1
Q ss_pred hccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCe
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 374 (623)
.++|...+.||+|+||.||+|++. .+..||+|+++... ...+.+.+|++++.++. ||||+++++++.....
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 346777899999999999999853 34679999997543 22356889999999997 9999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCC----------------------------------------------------------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD---------------------------------------------------------- 396 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 396 (623)
.++|+||+++|+|.++++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 9999999999999999864321
Q ss_pred ------------------------------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee
Q 006982 397 ------------------------------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL 440 (623)
Q Consensus 397 ------------------------------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl 440 (623)
....++|...++++.|++.||+|||+. +++||||||+|||+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEE
Confidence 113478888999999999999999998 99999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccc
Q 006982 441 DDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPET 519 (623)
Q Consensus 441 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~ 519 (623)
++++.+||+|||+++........ .......++..|+|||.+....++.++|||||||++|||++ |..||......+
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~- 349 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNY--ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE- 349 (401)
T ss_pred eCCCEEEEEecCcceeccccccc--ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-
Confidence 99999999999999865332111 11112346788999999988889999999999999999998 888986432211
Q ss_pred ccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 520 FKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
........+.. .. .......+ +.+++..|+. .+|.+||+++|+++.|+++
T Consensus 350 -------~~~~~~~~~~~--~~----~p~~~~~~---l~~li~~cl~-~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 350 -------QFYNAIKRGYR--MA----KPAHASDE---IYEIMQKCWE-EKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred -------HHHHHHHcCCC--CC----CCCCCCHH---HHHHHHHHcC-CChhHCcCHHHHHHHHHHH
Confidence 01111100000 00 01112333 4444556777 8999999999999999875
No 121
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.6e-35 Score=299.03 Aligned_cols=256 Identities=23% Similarity=0.396 Sum_probs=198.0
Q ss_pred ccCcccceeeccCccEEEEEEeC----CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|... .+..+++|.++... ...+.+.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778899999999999999853 23478999886533 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++++|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999643 24689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
........ .....++..|+|||++.+..++.++||||||+++||+++ |..||...... .....+.. ....
T Consensus 158 ~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~~~~~~~---~~~~ 228 (267)
T cd05066 158 DDPEAAYT-TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DVIKAIEE---GYRL 228 (267)
T ss_pred cccceeee-cCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HHHHHHhC---CCcC
Confidence 42221111 111223568999999998889999999999999999887 99998643221 11111111 0000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
+ .....++ .+.+++..|+. .+|.+||+|.++++.|+++
T Consensus 229 -----~--~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 -----P--APMDCPA---ALHQLMLDCWQ-KDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----C--CCCCCCH---HHHHHHHHHcc-cCchhCCCHHHHHHHHHhh
Confidence 0 0011222 34455567777 8999999999999999875
No 122
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.6e-35 Score=297.02 Aligned_cols=249 Identities=25% Similarity=0.401 Sum_probs=194.3
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEE-eCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCM-AKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~~ 383 (623)
.+|...+.||+|+||.||++... +..+++|.+.... ..+.+.+|+.++++++|+|++++++++. ..+..++|+||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 35778899999999999999875 7789999886543 3567899999999999999999999765 4456889999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 84 ~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~- 157 (256)
T cd05082 84 KGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD- 157 (256)
T ss_pred CCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccCC-
Confidence 999999986432 24588999999999999999999999 999999999999999999999999999986533211
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
...++..|+|||++....++.++||||||+++|||++ |+.||.... ..+........ .-...
T Consensus 158 ------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~~~~-~~~~~-- 220 (256)
T cd05082 158 ------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRVEKG-YKMDA-- 220 (256)
T ss_pred ------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHhcC-CCCCC--
Confidence 1124568999999998889999999999999999998 998886421 12222211111 00000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
....+.+ +..++..|+. .+|++|||+.++++.|+++
T Consensus 221 ----~~~~~~~---~~~li~~~l~-~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 221 ----PDGCPPV---VYDVMKQCWH-LDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ----CCCCCHH---HHHHHHHHhc-CChhhCcCHHHHHHHHhcC
Confidence 0112333 3444556776 8999999999999999864
No 123
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.7e-35 Score=304.50 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=199.2
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
++|...+.||+|+||.||++... .+..||+|.++... ...+.+.+|+++++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 56888999999999999999741 34579999887543 2345688999999999 799999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++|+|.++++... ...+++.++..++.|++.|+.|||+. +|+|+||||+||++++++.++++|||+++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999996432 23489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
........ .......++..|+|||.+....++.++|||||||++|||++ |..||......+ .+...+..
T Consensus 190 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~----~~~~~~~~---- 259 (302)
T cd05055 190 DIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS----KFYKLIKE---- 259 (302)
T ss_pred cccCCCce--eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH----HHHHHHHc----
Confidence 65432211 11112235778999999988889999999999999999998 999986532211 11111111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
.. ... .....++ .+.+++..|+. .+|++||++.|+++.|++.
T Consensus 260 ~~-----~~~-~~~~~~~---~~~~li~~cl~-~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 260 GY-----RMA-QPEHAPA---EIYDIMKTCWD-ADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CC-----cCC-CCCCCCH---HHHHHHHHHcC-CCchhCcCHHHHHHHHHhh
Confidence 00 000 0011222 35556667887 8999999999999999864
No 124
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.7e-35 Score=297.08 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=189.1
Q ss_pred eeeccCccEEEEEEe---CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 312 IIGSGRTGTMYKALL---EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
.||+|+||.||+|.+ .++..+++|+++... ...+++..|+.++.++.||||+++++++. .+..++|+||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999974 357889999986543 23467889999999999999999999885 45678999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++..........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999953 24688999999999999999999999 999999999999999999999999999987654322211
Q ss_pred ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 466 TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
. .....++..|+|||.+....++.++||||||+++|||++ |..||..... .++.... .......
T Consensus 154 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~i-~~~~~~~----- 218 (257)
T cd05116 154 A-KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--------NEVTQMI-ESGERME----- 218 (257)
T ss_pred e-cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-HCCCCCC-----
Confidence 1 112234678999999988888999999999999999998 9999864321 1111111 1111000
Q ss_pred hhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
. ....+.++. ++...|+. .+|++||++++|.+.|++
T Consensus 219 ~-~~~~~~~l~---~li~~~~~-~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 219 C-PQRCPPEMY---DLMKLCWT-YGVDERPGFAVVELRLRN 254 (257)
T ss_pred C-CCCCCHHHH---HHHHHHhc-cCchhCcCHHHHHHHHhc
Confidence 0 111233444 44556766 999999999999999975
No 125
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-35 Score=299.56 Aligned_cols=250 Identities=26% Similarity=0.440 Sum_probs=190.9
Q ss_pred ceeeccCccEEEEEEeCC-Cc--EEEEEEeccc--cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLED-GT--SLMVKRLQDS--QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++||+|+||.||+|..++ +. .+++|.++.. ......+.+|++++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999754 43 4688887643 23446788999999999 899999999999999999999999999
Q ss_pred CCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 385 GSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 385 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
|+|.+++..... ....+++.+++.++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999864321 123578999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHH
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
++....... .. .....+..|+|||++....++.++||||||+++|||++ |..||..... .+.....
T Consensus 158 l~~~~~~~~---~~--~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~~~~~~~ 224 (270)
T cd05047 158 LSRGQEVYV---KK--TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEKL 224 (270)
T ss_pred Cccccchhh---hc--cCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--------HHHHHHH
Confidence 986422110 00 11123567999999988889999999999999999997 9999864321 1111111
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
...... + . ..... ..+.+++..|+. .+|.+|||+.|++..|+++.
T Consensus 225 ~~~~~~-~-----~-~~~~~---~~~~~li~~~l~-~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 PQGYRL-E-----K-PLNCD---DEVYDLMRQCWR-EKPYERPSFAQILVSLNRML 269 (270)
T ss_pred hCCCCC-C-----C-CCcCC---HHHHHHHHHHcc-cChhhCCCHHHHHHHHHHhh
Confidence 110000 0 0 00112 235566677877 99999999999999998864
No 126
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=306.57 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=196.2
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
..|+..+.||+|.||.||+|.. +.++.||+|++.-.. ......++|+.++.+.+++||.+.++.+......+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3577778999999999999995 468899999997543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+.+|++.+.++. +..+++....-|..++..|+.|||++ +.+|||||+.|||+..+|.+|++|||++-.+....
T Consensus 93 ~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999963 34457777777899999999999999 99999999999999999999999999998876543
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... .+-+||+-|||||++....|+.|+||||+|+..+||.+|.+|+....+. .+...+.+ -.
T Consensus 166 ~rr----~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-rvlflIpk-------------~~ 227 (467)
T KOG0201|consen 166 KRR----KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-RVLFLIPK-------------SA 227 (467)
T ss_pred hcc----ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-eEEEeccC-------------CC
Confidence 332 3445999999999999889999999999999999999999999765442 11111111 00
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
-+.+.+ .....+.+++. .|+. .+|+.||++.++++.
T Consensus 228 PP~L~~-~~S~~~kEFV~---~CL~-k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 228 PPRLDG-DFSPPFKEFVE---ACLD-KNPEFRPSAKELLKH 263 (467)
T ss_pred CCcccc-ccCHHHHHHHH---HHhh-cCcccCcCHHHHhhh
Confidence 111111 12222333322 3444 889999999998763
No 127
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.8e-36 Score=303.53 Aligned_cols=195 Identities=25% Similarity=0.353 Sum_probs=168.2
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||+||++... +++.||+|.+..... ..+.+..|++++.+++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999864 688999999865321 234577899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++.........+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.........
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~---- 153 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK---- 153 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc----
Confidence 988754333446789999999999999999999999 9999999999999999999999999999865432221
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 200 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR 200 (280)
T ss_pred ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 12235889999999999999999999999999999999999999753
No 128
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-35 Score=309.16 Aligned_cols=263 Identities=24% Similarity=0.379 Sum_probs=201.2
Q ss_pred ccCcccceeeccCccEEEEEEeC--------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKK 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 373 (623)
.+|.+.+.||+|+||.||++... .+..|++|.++... ...+.+.+|++++.++ +||||+++++++....
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 35788899999999999999742 12368999887532 3346788999999999 8999999999999999
Q ss_pred eeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
..++++||+++|+|.+++..... ....++|.+++.++.|++.||+|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc
Confidence 99999999999999999864321 234588999999999999999999999 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccc
Q 006982 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF 520 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~ 520 (623)
+++.+||+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---- 242 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---- 242 (334)
T ss_pred CCCcEEECCcccceeccccccccc--ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH----
Confidence 999999999999986543221111 111224567999999998889999999999999999998 8888864221
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
.++....... ...+. ..... ..+.+++..|+. .+|++||++.|+++.|+++.....
T Consensus 243 ----~~~~~~~~~~-~~~~~------~~~~~---~~l~~li~~cl~-~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 243 ----EELFKLLKEG-HRMDK------PANCT---HELYMIMRECWH-AVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred ----HHHHHHHHcC-CCCCC------CCCCC---HHHHHHHHHHcc-cChhhCcCHHHHHHHHHHHhhhcC
Confidence 1222211111 00000 01112 245566677887 999999999999999999875443
No 129
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-35 Score=312.82 Aligned_cols=193 Identities=24% Similarity=0.308 Sum_probs=166.9
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
++|...+.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+||+.
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence 5799999999999999999995 468899999653 2356789999999999999999999999999999999995
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 167 -~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 167 -TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred -CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 689888853 24588999999999999999999999 9999999999999999999999999999754321111
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 239 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 239 ---KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ---ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 11234589999999999988999999999999999999999988754
No 130
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.6e-35 Score=303.67 Aligned_cols=263 Identities=23% Similarity=0.351 Sum_probs=196.1
Q ss_pred ccCcccceeeccCccEEEEEEeCC---------------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED---------------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLG 367 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~ 367 (623)
++|...+.||+|+||.||++...+ ...|++|.+.... .....+.+|++++.+++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987542 2348899886532 23456889999999999999999999
Q ss_pred EEEeCCeeeEEEecCCCCCHhhhccCCCC--------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCcee
Q 006982 368 FCMAKKERLLVYKHMPNGSLYDLLHPADD--------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCIL 439 (623)
Q Consensus 368 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NIL 439 (623)
++...+..++||||+++++|.+++..... ....++|..++.++.|++.|++|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999999854321 113478999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCCc
Q 006982 440 LDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT--GERPTNVAKAP 517 (623)
Q Consensus 440 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt--g~~P~~~~~~~ 517 (623)
+++++.+||+|||++........ ........++..|+|||+.....++.++|||||||++|||++ |..||......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EcCCCcEEecccccccccccCcc--eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 99999999999999986543221 111122235678999999988889999999999999999998 55666542221
Q ss_pred ccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 518 ETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 518 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.................... .....+ ..+.+++.+|+. .+|++||++++|++.|+
T Consensus 240 -----~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~l~~li~~~l~-~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 -----QVIENTGEFFRNQGRQIYLS---QTPLCP---SPVFKLMMRCWS-RDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -----HHHHHHHHhhhhccccccCC---CCCCCC---HHHHHHHHHHcC-CCchhCcCHHHHHHHHh
Confidence 11111111111000000000 000112 356677778887 99999999999999886
No 131
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=319.15 Aligned_cols=274 Identities=26% Similarity=0.438 Sum_probs=216.4
Q ss_pred CcccceeeccCccEEEEEEe-CCC----cEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 307 FSKNNIIGSGRTGTMYKALL-EDG----TSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-~~~----~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
....++||+|+||+||+|.+ .+| -+||+|++... ..+.+++.+|+.+|.+++|||+++++|+|..+. ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34568999999999999985 344 35888988664 355789999999999999999999999998876 77999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
+|||.|+|.++++..+ ..+--...+.+..|||+||.|||.+ +++||||.++||||..-..+||.|||+++.+.+
T Consensus 777 q~mP~G~LlDyvr~hr---~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHR---DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred HhcccchHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 9999999999997644 4566778899999999999999999 999999999999999999999999999999887
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
.+....... ..-.+.|||-|.+....++.++|||||||.+||++| |..|+...... ++.
T Consensus 851 d~~ey~~~~--gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~------------------eI~ 910 (1177)
T KOG1025|consen 851 DEKEYSAPG--GKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE------------------EIP 910 (1177)
T ss_pred ccccccccc--cccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH------------------Hhh
Confidence 655443322 223578999999999999999999999999999998 99998764332 122
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC-CC--CCcccccCCCCCCch
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH-FT--TEDEIMLPSDSGDAD 608 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~-~~--~~~~~~~~~~~~~~~ 608 (623)
+++..-.+-..++-.-.++-.+...|+. .|+..||+++++...+.+...+.+ +. +.+...+|++.+...
T Consensus 911 dlle~geRLsqPpiCtiDVy~~mvkCwm-id~~~rp~fkel~~~fs~~ardpqryl~i~~~~~~~~s~~~~~~ 982 (1177)
T KOG1025|consen 911 DLLEKGERLSQPPICTIDVYMVMVKCWM-IDADSRPTFKELAEEFSRMARDPQRYLVIQDERMILPSPESSLF 982 (1177)
T ss_pred HHHhccccCCCCCCccHHHHHHHHHHhc-cCcccCccHHHHHHHHHHHhcCcceEeeehhhcCCCCCCCcchH
Confidence 2222211111233344567777889999 999999999999999998766654 11 122255666666654
No 132
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-35 Score=301.28 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=198.5
Q ss_pred ccCcccceeeccCccEEEEEEeCC------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|...+.||+|+||.||+|...+ +..|++|.+.... .....+.+|+.++..++|||++++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 467888999999999999998642 3679999986543 33457889999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCC------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEee
Q 006982 377 LVYKHMPNGSLYDLLHPADD------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~D 450 (623)
+|+||+++|+|.+++..... ....++|..++.++.|++.||.|||+. +++||||||+||++++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECC
Confidence 99999999999999864322 123578999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHH
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
||+++......... ......++..|+|||.+....++.++|||||||++||+++ |..||...... ...++..
T Consensus 163 fg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----~~~~~~~ 235 (277)
T cd05032 163 FGMTRDIYETDYYR--KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-----EVLKFVI 235 (277)
T ss_pred cccchhhccCcccc--cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-----HHHHHHh
Confidence 99998654322111 1112336788999999988889999999999999999998 88888642211 1111111
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
........ ... ...+..++..|+. .+|++|||+.++++.|+
T Consensus 236 ----~~~~~~~~------~~~---~~~~~~li~~~l~-~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 ----DGGHLDLP------ENC---PDKLLELMRMCWQ-YNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ----cCCCCCCC------CCC---CHHHHHHHHHHcC-CChhhCCCHHHHHHHhc
Confidence 11111100 111 2345566667777 99999999999999886
No 133
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-35 Score=298.12 Aligned_cols=256 Identities=22% Similarity=0.387 Sum_probs=196.7
Q ss_pred cCcccceeeccCccEEEEEEeCC-C---cEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED-G---TSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
+|...+.||+|+||.||+|.... + ..|++|.+... ......|..|+.++++++||||+++++++.+....++|+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778999999999999999653 3 36999998753 234567999999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ...+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.++++|||+++....
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 85 EFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred ecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999998643 24689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcccc-cccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 460 IDTHLST-FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 460 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
....... ...+...+..|+|||++....++.++||||||+++||+++ |..||...... ....++.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-----~~~~~i~~~~---~~ 230 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVINAIEQDY---RL 230 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCC---cC
Confidence 2211110 0011112457999999998899999999999999999887 99998643211 1122221100 00
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
. .....+. .+.+++..|+. .+|.+||++.+|+..|+++
T Consensus 231 ~-------~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 P-------PPMDCPT---ALHQLMLDCWQ-KDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred C-------CcccCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHHHhh
Confidence 0 0011122 34556667877 9999999999999998864
No 134
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.4e-35 Score=308.06 Aligned_cols=192 Identities=22% Similarity=0.308 Sum_probs=165.7
Q ss_pred ceeeccCccEEEEEEe----CCCcEEEEEEecccc-----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+.||+|+||.||+++. .+++.||+|.++... .....+..|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 357889999986532 2234577899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.. ...+.+..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999853 24578888899999999999999999 99999999999999999999999999987543221
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 155 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~ 202 (323)
T cd05584 155 TV----THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA 202 (323)
T ss_pred Cc----ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCC
Confidence 11 1223489999999999988889999999999999999999999975
No 135
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.3e-35 Score=306.60 Aligned_cols=196 Identities=23% Similarity=0.340 Sum_probs=166.3
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHH---hCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMAT---LGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~---l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
|...+.||+|+||.||++... +++.||+|+++... ...+.+..|+++ +.+++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999864 68999999997532 223445556554 5677899999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++|+|..+++. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999998842 4689999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .....|++.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 153 GFGDR----TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred CCCCc----ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 21111 12234899999999999989999999999999999999999999753
No 136
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.8e-36 Score=315.93 Aligned_cols=203 Identities=26% Similarity=0.323 Sum_probs=175.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+|... +++.||+|++.... .....+..|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999965 68999999997542 33456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999999643 4688999999999999999999998 999999999999999999999999999987644
Q ss_pred CCC-------------------------cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDT-------------------------HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 220 0001122345899999999999999999999999999999999999999754
No 137
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-35 Score=300.26 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=194.3
Q ss_pred HHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC------C
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK------K 373 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~ 373 (623)
.+++.|+..+.||+|+||.||+|... +++.|++|.+.........+..|+.++.++ +|||++++++++... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 35567888899999999999999865 578899999876655667888999999998 799999999998753 3
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++|+||+++|+|.+++.... ...++|..+..++.|++.|++|||+. +|+|+||||+||++++++.++|+|||+
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 5789999999999999986432 34688999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHH
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI 528 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~ 528 (623)
+......... .....|+..|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 158 ~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-------~~~~ 226 (272)
T cd06637 158 SAQLDRTVGR----RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RALF 226 (272)
T ss_pred ceeccccccc----CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-------HHHH
Confidence 9865432111 12234788999999986 345788999999999999999999999642211 1110
Q ss_pred HHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .. ... .+.+.....+.+ +..+..+|+. .+|.+|||+.|+++
T Consensus 227 ~-~~-~~~-----~~~~~~~~~~~~---~~~li~~~l~-~~p~~Rpt~~~il~ 268 (272)
T cd06637 227 L-IP-RNP-----APRLKSKKWSKK---FQSFIESCLV-KNHSQRPTTEQLMK 268 (272)
T ss_pred H-Hh-cCC-----CCCCCCCCcCHH---HHHHHHHHcC-CChhhCCCHHHHhh
Confidence 0 00 000 011111112233 3445557776 89999999999875
No 138
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.6e-35 Score=304.86 Aligned_cols=261 Identities=25% Similarity=0.418 Sum_probs=199.4
Q ss_pred ccCcccceeeccCccEEEEEEeC--------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKK 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 373 (623)
++|...+.||+|+||.||++... ....+++|.++... .....+..|++++.++ +||||+++++++....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778899999999999999742 24568999887543 2345688999999999 6999999999999988
Q ss_pred eeeEEEecCCCCCHhhhccCCCC------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADD------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
..++|+||+++|+|.+++..... ....++|.++.+++.|++.||.|||+. +++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEc
Confidence 89999999999999999865321 124589999999999999999999998 999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccc
Q 006982 442 DDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETF 520 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~ 520 (623)
+++.+||+|||+++........... ....++..|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--- 243 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKT--SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--- 243 (314)
T ss_pred CCCcEEEcccccccccccccccccc--ccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 9999999999999866432211111 11124567999999988889999999999999999999 88888643211
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
+..... ......+. ...... ++..++.+|+. .+|++||++.|+++.|+++...
T Consensus 244 -----~~~~~~-~~~~~~~~------~~~~~~---~l~~li~~cl~-~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 244 -----ELFKLL-REGHRMDK------PSNCTH---ELYMLMRECWH-AVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred -----HHHHHH-HcCCCCCC------CCCCCH---HHHHHHHHHcC-CCcccCcCHHHHHHHHHHHHHH
Confidence 111111 11110000 011223 34456667887 9999999999999999988653
No 139
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.9e-35 Score=295.04 Aligned_cols=252 Identities=25% Similarity=0.392 Sum_probs=188.4
Q ss_pred ceeeccCccEEEEEEeC----CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCeeeEEEecCC
Q 006982 311 NIIGSGRTGTMYKALLE----DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKERLLVYKHMP 383 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e~~~ 383 (623)
+.||+|+||.||+|... +...+++|.+... ....+.+.+|+.+++.++|||++++++++.. +...++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999988543 2335678899999999999999999998764 456789999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSET---HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 999999996432 3467888899999999999999998 9999999999999999999999999999865432111
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC-CCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGER-PTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~-P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.........++..|+|||++....++.++||||||+++|||++|.. ||.... ..+...........
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--------~~~~~~~~~~~~~~----- 221 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--------SFDITVYLLQGRRL----- 221 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHhcCCCC-----
Confidence 1111122335778999999988889999999999999999999654 454211 11111111111000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
......++ .+.+++..|+. .+|++||++.||++.|+++.
T Consensus 222 --~~~~~~~~---~~~~li~~cl~-~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 --LQPEYCPD---PLYEVMLSCWH-PKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred --CCCCcCCH---HHHHHHHHHcC-CChhhCCCHHHHHHHHHHHh
Confidence 00111122 35566677887 89999999999999999874
No 140
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.3e-35 Score=309.02 Aligned_cols=261 Identities=24% Similarity=0.348 Sum_probs=197.0
Q ss_pred ccCcccceeeccCccEEEEEEe------CCCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC-Ce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL------EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK-KE 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~ 374 (623)
++|...+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4688899999999999999973 356789999997543 2345688999999999 689999999988654 45
Q ss_pred eeEEEecCCCCCHhhhccCCCC----------------------------------------------------------
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD---------------------------------------------------------- 396 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 396 (623)
.++|+||+++|+|.++++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 6899999999999999864321
Q ss_pred -----CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCC
Q 006982 397 -----TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGE 471 (623)
Q Consensus 397 -----~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~ 471 (623)
....++|.++.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........ ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~ 241 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKGDA 241 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch--hhcCCC
Confidence 012478889999999999999999999 9999999999999999999999999999865322111 111122
Q ss_pred CCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCC
Q 006982 472 FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGV 550 (623)
Q Consensus 472 ~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 550 (623)
.++..|+|||.+.+..++.++||||||+++|||++ |..||....... .. ... ......... ....
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~---~~~-~~~~~~~~~------~~~~ 307 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EF---CRR-LKEGTRMRA------PDYT 307 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HH---HHH-HhccCCCCC------CCCC
Confidence 35678999999988889999999999999999997 888986432210 01 111 111000000 0011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 551 DNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 551 ~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
. ..+.+++..|+. .+|++||++.|+++.|+.+.+
T Consensus 308 ~---~~~~~~~~~cl~-~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 T---PEMYQTMLDCWH-GEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred C---HHHHHHHHHHcc-CChhhCcCHHHHHHHHHHHHh
Confidence 1 235666677887 999999999999999998754
No 141
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.7e-35 Score=300.81 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=197.6
Q ss_pred HhccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE 374 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 374 (623)
..++|.+.+.||+|+||.||+|..+ .+..||+|.+.... .....+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567888999999999999999753 24579999886543 223467889999999999999999999999999
Q ss_pred eeEEEecCCCCCHhhhccCCCC------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEE
Q 006982 375 RLLVYKHMPNGSLYDLLHPADD------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKI 448 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl 448 (623)
.++||||+++|+|.+++..... ....+++.....++.|++.||.|||+. +|+||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999964221 123457788899999999999999999 9999999999999999999999
Q ss_pred eecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHH
Q 006982 449 SDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 449 ~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~ 527 (623)
+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 161 ~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--------~~~ 230 (288)
T cd05061 161 GDFGMTRDIYETDYYRK--GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQV 230 (288)
T ss_pred CcCCccccccccccccc--cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHH
Confidence 99999986543221111 111235678999999988889999999999999999998 7878864221 111
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
....... ..... ....+ ..+.+++..|+. .+|++|||+.++++.|++.
T Consensus 231 ~~~~~~~-~~~~~------~~~~~---~~~~~li~~~l~-~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 231 LKFVMDG-GYLDQ------PDNCP---ERVTDLMRMCWQ-FNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHcC-CCCCC------CCCCC---HHHHHHHHHHcC-CChhHCcCHHHHHHHHHhh
Confidence 1111111 00000 01112 345555567777 9999999999999999875
No 142
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.4e-35 Score=299.95 Aligned_cols=256 Identities=22% Similarity=0.370 Sum_probs=195.7
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.+|...+.||+|+||.||++... ++..+++|.+.... .....+.+|++++.+++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35667889999999999999742 35678899886543 345678999999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCC-----------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 378 VYKHMPNGSLYDLLHPADD-----------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
++||+++|+|.+++..... ....+++..++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCE
Confidence 9999999999999864321 113588999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHH
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~ 525 (623)
+|+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 162 kL~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-------- 231 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT-------- 231 (280)
T ss_pred EECCCCceeEcCCCcee--ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--------
Confidence 99999999765432211 11122235678999999998899999999999999999998 88888643221
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
+........... . .....+.. +.+++..|+. .||.+||++.||.+.|+
T Consensus 232 ~~~~~~~~~~~~-~------~~~~~~~~---~~~li~~cl~-~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 EAIECITQGREL-E------RPRTCPPE---VYAIMQGCWQ-REPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHcCccC-C------CCCCCCHH---HHHHHHHHcc-CChhhCCCHHHHHHHHh
Confidence 111111110000 0 00112233 3344556666 89999999999999886
No 143
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.9e-35 Score=312.29 Aligned_cols=203 Identities=22% Similarity=0.292 Sum_probs=173.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||++... +++.||+|++.... .....+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999965 68899999997532 23355788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+|||+++.+..
T Consensus 81 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999863 24589999999999999999999999 999999999999999999999999999976432
Q ss_pred CCCcc----------------------------------cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 006982 460 IDTHL----------------------------------STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505 (623)
Q Consensus 460 ~~~~~----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ell 505 (623)
..... ........||+.|+|||++....++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 11000 00011235899999999999989999999999999999999
Q ss_pred hCCCCCCCC
Q 006982 506 TGERPTNVA 514 (623)
Q Consensus 506 tg~~P~~~~ 514 (623)
+|..||...
T Consensus 234 ~G~~Pf~~~ 242 (364)
T cd05599 234 VGYPPFCSD 242 (364)
T ss_pred cCCCCCCCC
Confidence 999999753
No 144
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.6e-36 Score=318.89 Aligned_cols=203 Identities=20% Similarity=0.281 Sum_probs=173.2
Q ss_pred HHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
....++|...+.||+|+||.||++... ++..+|+|.+.... .....+.+|+.++..++||||+++++++.+.+..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 334567999999999999999999965 57889999986422 2345578899999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 119 ~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccce
Confidence 999999999999999952 3478888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... .......||+.|+|||++... .++.++||||+||++|||++|+.||...
T Consensus 191 ~~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 191 KMDETGM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred ecccCCc---eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 7643221 112234589999999998653 3788999999999999999999999753
No 145
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.9e-35 Score=294.22 Aligned_cols=250 Identities=28% Similarity=0.443 Sum_probs=197.2
Q ss_pred ceeeccCccEEEEEEeCC----CcEEEEEEecccccc--HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLED----GTSLMVKRLQDSQRS--EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|...+ +..|++|.+...... .+.+.+|++.+..++|+|++++++++......++|+||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999654 788999999765433 57889999999999999999999999998999999999999
Q ss_pred CCHhhhccCCCCC-----CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 385 GSLYDLLHPADDT-----GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 385 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
++|.+++...... ...+++..+..++.|++.|++|||+. +++|+||||+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999754211 36789999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
... ........++..|+|||.+....++.++||||+|+++|||++ |..||..... .+...........
T Consensus 158 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~- 226 (262)
T cd00192 158 DDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRKGYRL- 226 (262)
T ss_pred ccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCC-
Confidence 321 111223447889999999988889999999999999999999 6889875421 1111111111000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
. .....+ .++..++..|+. .+|++||++.|+++.|+
T Consensus 227 ~------~~~~~~---~~~~~li~~~l~-~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 P------KPEYCP---DELYELMLSCWQ-LDPEDRPTFSELVERLE 262 (262)
T ss_pred C------CCccCC---hHHHHHHHHHcc-CCcccCcCHHHHHHhhC
Confidence 0 001112 345556667777 99999999999998874
No 146
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.9e-35 Score=299.94 Aligned_cols=263 Identities=22% Similarity=0.348 Sum_probs=198.5
Q ss_pred ccCcccceeeccCccEEEEEEeCC-----------------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-----------------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPL 365 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l 365 (623)
++|...+.||+|+||.||++...+ +..|++|.+.... ...+.+.+|++++.+++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 468888999999999999988543 2458899886543 345678899999999999999999
Q ss_pred eEEEEeCCeeeEEEecCCCCCHhhhccCCCC-------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCce
Q 006982 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPADD-------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCI 438 (623)
Q Consensus 366 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NI 438 (623)
++++..++..++|+||+++++|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence 9999999999999999999999999865431 123689999999999999999999998 999999999999
Q ss_pred eeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCC
Q 006982 439 LLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT--GERPTNVAKA 516 (623)
Q Consensus 439 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt--g~~P~~~~~~ 516 (623)
++++++.++|+|||+++........ .......++..|+|||++....++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY--RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eecCCCceEEccccceeecccCcce--eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9999999999999999865432211 11112235778999999988889999999999999999998 6667753221
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
. ..................... ....+ ..+.+++..|+. .+|++|||+.||++.|+
T Consensus 240 ~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~l~~li~~cl~-~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 Q-----QVIENAGHFFRDDGRQIYLPR---PPNCP---KDIYELMLECWR-RDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H-----HHHHHHHhccccccccccCCC---ccCCC---HHHHHHHHHHhc-cChhcCCCHHHHHHHhc
Confidence 1 111111111111110000000 00111 346667778887 99999999999999886
No 147
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.9e-36 Score=319.04 Aligned_cols=203 Identities=22% Similarity=0.261 Sum_probs=171.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688889999999999999985 478899999986532 23456788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999863 24588889999999999999999999 999999999999999999999999999964321
Q ss_pred CCCc-----------cc--------------------------------ccccCCCCcccccCcccccCCCCCcchhHHH
Q 006982 460 IDTH-----------LS--------------------------------TFVNGEFGDLGYVAPEYARTLVATPKGDVYS 496 (623)
Q Consensus 460 ~~~~-----------~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~s 496 (623)
.... .. .......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 00 0001235899999999999889999999999
Q ss_pred HHHHHHHHHhCCCCCCCC
Q 006982 497 FGTVLLELVTGERPTNVA 514 (623)
Q Consensus 497 fGvil~elltg~~P~~~~ 514 (623)
|||++|||++|+.||...
T Consensus 234 lGvil~elltG~~Pf~~~ 251 (377)
T cd05629 234 LGAIMFECLIGWPPFCSE 251 (377)
T ss_pred cchhhhhhhcCCCCCCCC
Confidence 999999999999999753
No 148
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.6e-35 Score=300.46 Aligned_cols=199 Identities=27% Similarity=0.385 Sum_probs=171.9
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.|+..++||+|+||.||++... +++.||+|++.... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3677899999999999999964 68899999986532 223457789999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 999999999885432 24689999999999999999999999 9999999999999999999999999999865422
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. .....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 156 ET-----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred Cc-----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 11 12335889999999999888999999999999999999999999753
No 149
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-35 Score=300.81 Aligned_cols=249 Identities=23% Similarity=0.381 Sum_probs=194.9
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.+|...+.||+|++|.||+|.. .++..|++|.+.... .....+.+|+.+++.++|||++++++++......++|+||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4678889999999999999985 468899999886543 33567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 100 ~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 100 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999842 3578999999999999999999999 999999999999999999999999999886543221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. .....+++.|+|||++.+..++.++|||||||++|||++|+.||...... ..+... .... ....-.
T Consensus 172 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-------~~~~~~-~~~~-~~~~~~ 238 (296)
T cd06654 172 K----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLI-ATNG-TPELQN 238 (296)
T ss_pred c----cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-------HhHHHH-hcCC-CCCCCC
Confidence 1 11234788999999998888899999999999999999999999653221 111110 0000 000000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...... .+..+..+|+. .+|++||++.|+++.
T Consensus 239 ----~~~~~~---~l~~li~~~l~-~~p~~Rpt~~eil~~ 270 (296)
T cd06654 239 ----PEKLSA---IFRDFLNRCLD-MDVEKRGSAKELLQH 270 (296)
T ss_pred ----ccccCH---HHHHHHHHHCc-CCcccCcCHHHHhhC
Confidence 001112 23445556776 899999999999873
No 150
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.7e-35 Score=312.90 Aligned_cols=201 Identities=20% Similarity=0.276 Sum_probs=171.6
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
..++|...+.||+|+||.||+++.. ++..||+|.+.... .....+.+|+.++..++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4567899999999999999999965 68899999986432 233457789999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 121 v~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999999853 3477788889999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 250 (370)
T cd05596 193 DANGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (370)
T ss_pred cCCCcc---cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC
Confidence 432211 11234589999999998643 4789999999999999999999999753
No 151
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.6e-35 Score=299.73 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=202.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-----CCcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-----DGTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 375 (623)
+.|...+.||+|+||.||++.+. ++..+|+|.+..... ..+.+.+|++.+++++|||++++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34666789999999999999854 367899999976654 36789999999999999999999999887 5578
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++++|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 99999999999999996432 3589999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccc-------cccHHHHH
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF-------KGNLVEWI 528 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~-------~~~l~~~~ 528 (623)
......... .......++..|+|||...+..++.++||||||+++|||++|+.|+......... ......+.
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 158 VLPEDKDYY-YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred ccccCCcce-eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 765322111 1111223556799999998888999999999999999999999998653221100 00011111
Q ss_pred HHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 529 AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
. .+...............+.+++.+|+. .+|++||+|.||+++|+.++
T Consensus 237 ~----------~~~~~~~~~~~~~~~~~~~~li~~cl~-~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 237 E----------LLKEGERLPRPPSCPDEVYDLMKLCWE-AEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred H----------HHHcCCcCCCCccCCHHHHHHHHHHhc-cChhhCCCHHHHHHHHhhcC
Confidence 1 111110000011112346667778887 99999999999999999863
No 152
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.9e-35 Score=300.53 Aligned_cols=258 Identities=24% Similarity=0.398 Sum_probs=198.7
Q ss_pred hccCcccceeeccCccEEEEEEeC------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
.++|...+.||+|+||.||++... ++..|++|.+.... ...+.+.+|+.++.+++|||++++++++......
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356888899999999999999853 46789999987543 2346788999999999999999999999998899
Q ss_pred eEEEecCCCCCHhhhccCCCC------------------CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCc
Q 006982 376 LLVYKHMPNGSLYDLLHPADD------------------TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKC 437 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~N 437 (623)
++|+||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 999999999999999863211 123578899999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCC
Q 006982 438 ILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKA 516 (623)
Q Consensus 438 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~ 516 (623)
|++++++.++|+|||++..+....... .......+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYK--ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred eEecCCCceEECccccceecccCcccc--ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999998654322110 1112234678999999988889999999999999999998 8888854221
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.+...... ...... ...... ..+.+++.+|+. .+|++|||+.|+++.|++
T Consensus 239 --------~~~~~~~~-~~~~~~------~~~~~~---~~l~~li~~~l~-~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 --------EEVIYYVR-DGNVLS------CPDNCP---LELYNLMRLCWS-KLPSDRPSFASINRILQR 288 (288)
T ss_pred --------HHHHHHHh-cCCCCC------CCCCCC---HHHHHHHHHHcc-cCcccCCCHHHHHHHhhC
Confidence 11111111 111100 001112 345566677877 899999999999999873
No 153
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.4e-35 Score=300.44 Aligned_cols=264 Identities=20% Similarity=0.329 Sum_probs=197.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-----------------CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcce
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-----------------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPL 365 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l 365 (623)
++|+..+.||+|+||.||++... +...+++|.+.... .....+.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998533 23468999987542 334678999999999999999999
Q ss_pred eEEEEeCCeeeEEEecCCCCCHhhhccCCCCC-------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCce
Q 006982 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPADDT-------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCI 438 (623)
Q Consensus 366 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NI 438 (623)
++++...+..++|+||+++|+|.+++...... ...+++.+++.++.|++.|++|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999999999998653321 23478889999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCC
Q 006982 439 LLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT--GERPTNVAKA 516 (623)
Q Consensus 439 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt--g~~P~~~~~~ 516 (623)
++++++.++|+|||+++.+...... .......++..|+|||......++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY--RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce--eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 9999999999999999865432211 11111224678999999888889999999999999999998 6677754322
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.+ .................. + .....+ ..+.+++..|+. .||++||++.||.+.|++
T Consensus 240 ~~-----~~~~~~~~~~~~~~~~~~-~--~~~~~~---~~~~~li~~cl~-~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQ-----VIENTGEFFRDQGRQVYL-P--KPALCP---DSLYKLMLSCWR-RNAKERPSFQEIHATLLE 296 (296)
T ss_pred HH-----HHHHHHHHHhhccccccC-C--CCCCCC---HHHHHHHHHHcC-CCcccCCCHHHHHHHHhC
Confidence 11 111111111000000000 0 001112 355667778887 999999999999998863
No 154
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.3e-35 Score=308.55 Aligned_cols=192 Identities=20% Similarity=0.243 Sum_probs=166.1
Q ss_pred ceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 311 NIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
+.||+|+||.||++.. .++..||+|.+.... .....+..|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 478899999987532 23356778999999999999999999999999999999999999
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
+|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++........
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~- 152 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT- 152 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc-
Confidence 99998853 3468999999999999999999997 6 8999999999999999999999999998754321111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~ 198 (325)
T cd05594 153 ---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 198 (325)
T ss_pred ---cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCC
Confidence 1223489999999999988999999999999999999999999964
No 155
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.5e-35 Score=319.87 Aligned_cols=200 Identities=19% Similarity=0.281 Sum_probs=163.7
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--------Ce
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--------KE 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~ 374 (623)
.++|...+.||+|+||.||+|... ++..||+|++.... ....+|+.++++++||||+++++++... ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 457999999999999999999964 68899999885432 2345799999999999999999887532 13
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeeccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFGL 453 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgl 453 (623)
.++||||+++ +|.+++.........+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecccc
Confidence 5689999985 78777654333446789999999999999999999999 999999999999999654 799999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
++.+...... ....||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 218 a~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 275 (440)
T PTZ00036 218 AKNLLAGQRS-----VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275 (440)
T ss_pred chhccCCCCc-----ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876432211 12347899999998865 468999999999999999999999997643
No 156
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.6e-35 Score=293.68 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=193.0
Q ss_pred ceeeccCccEEEEEEeCC--C--cEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLED--G--TSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|++|.||+|.+.+ + ..|++|.+..... ..+.+.+|++.+++++||||+++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998643 3 3689999876543 45678999999999999999999999988 888999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++..... ..++|...+.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999965432 4689999999999999999999999 99999999999999999999999999998765432221
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.. .....++..|+|||++.+..++.++||||||+++|||++ |+.||...... +.............
T Consensus 155 ~~-~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~---- 221 (257)
T cd05040 155 VM-EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDKEGERLE---- 221 (257)
T ss_pred ec-ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHhcCCcCC----
Confidence 11 112346789999999998899999999999999999999 99998643221 11111110000000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.....+ ..+..++..|+. .+|++||+++|+++.|.
T Consensus 222 --~~~~~~---~~~~~li~~~l~-~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 --RPEACP---QDIYNVMLQCWA-HNPADRPTFAALREFLP 256 (257)
T ss_pred --CCccCC---HHHHHHHHHHCC-CCcccCCCHHHHHHHhc
Confidence 001112 234455667776 99999999999999875
No 157
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-35 Score=306.74 Aligned_cols=193 Identities=23% Similarity=0.327 Sum_probs=165.2
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++||+|+||.||+|+.. +++.||+|++.... .....+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999965 57899999987532 2334567788888765 799999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|..++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~- 152 (321)
T cd05591 81 GDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT- 152 (321)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcc-
Confidence 999998853 34688999999999999999999999 9999999999999999999999999999754322111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 153 ---TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred ---ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 12234899999999999889999999999999999999999999753
No 158
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.7e-35 Score=296.40 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=199.8
Q ss_pred ccCcccceeeccCccEEEEEEeCC-Cc----EEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GT----SLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
.+|...+.||+|+||.||+|...+ |. .+++|.+.... .....+.+|+..+.+++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 457778999999999999998643 32 58889886553 234678899999999999999999999987 78899
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK---DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 999999999999996432 3589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
........ ..+..++..|+|||.+....++.++||||||+++||+++ |+.||..... .++.........
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~ 229 (279)
T cd05057 160 DVDEKEYH--AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKGER 229 (279)
T ss_pred cCccccee--cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCCCC
Confidence 54322211 112224678999999988889999999999999999998 9999865322 111111111000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
.. ........+..++..|+. .+|.+||++.++++.|+++..+
T Consensus 230 --------~~--~~~~~~~~~~~~~~~~l~-~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 230 --------LP--QPPICTIDVYMVLVKCWM-IDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred --------CC--CCCCCCHHHHHHHHHHcC-CChhhCCCHHHHHHHHHHHHhC
Confidence 00 000111245566678887 8999999999999999998654
No 159
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.1e-35 Score=306.29 Aligned_cols=193 Identities=22% Similarity=0.324 Sum_probs=165.5
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|+.+ +++.||+|++.... .....+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 68899999986532 2345667788888766 699999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~- 152 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT- 152 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc-
Confidence 999998853 24688999999999999999999999 9999999999999999999999999998754322111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 153 ---TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred ---ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 12234899999999999888999999999999999999999999753
No 160
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.7e-35 Score=301.32 Aligned_cols=258 Identities=25% Similarity=0.441 Sum_probs=197.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCc----EEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGT----SLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|+||.||+|... ++. .+++|.+.... .....+.+|+.++++++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45777889999999999999853 443 47888876543 2234688999999999999999999998754 4679
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
++||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccc
Confidence 99999999999998643 23588999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
...... ....+..++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+++.. ...
T Consensus 160 ~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~---~~~ 229 (303)
T cd05110 160 EGDEKE--YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-----REIPDLLEK---GER 229 (303)
T ss_pred cCcccc--cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHC---CCC
Confidence 432211 11122335678999999998889999999999999999998 8899864211 111122111 000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
. . ........+..++..|+. .+|++||+++++++.|+++.++.
T Consensus 230 ~--------~--~~~~~~~~~~~li~~c~~-~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 230 L--------P--QPPICTIDVYMVMVKCWM-IDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred C--------C--CCCCCCHHHHHHHHHHcC-CChhhCcCHHHHHHHHHHHHhch
Confidence 0 0 001112345666778888 89999999999999999986554
No 161
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.7e-35 Score=307.22 Aligned_cols=199 Identities=22% Similarity=0.301 Sum_probs=168.7
Q ss_pred cCcccceeeccCccEEEEEEe----CCCcEEEEEEecccc-----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 306 SFSKNNIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
+|...+.||+|+||.||+++. .++..||+|++.... ...+.+..|++++.++ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477789999999999999885 357899999986432 2235678899999999 589999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999999853 34588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
......... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 154 EFLSEEKER---TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred cccccCCCc---cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 653322111 1123489999999998765 4788999999999999999999999643
No 162
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.2e-35 Score=297.07 Aligned_cols=253 Identities=24% Similarity=0.353 Sum_probs=182.6
Q ss_pred eeeccCccEEEEEEeCC---CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCC
Q 006982 312 IIGSGRTGTMYKALLED---GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGS 386 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 386 (623)
.||+|+||.||+|...+ ...+++|.+.... .....+.+|++.++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 3468888775432 234568899999999999999999999999999999999999999
Q ss_pred HhhhccCCCCC-CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 387 LYDLLHPADDT-GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 387 L~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
|.+++...... ....++...+.++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999654321 23457888899999999999999999 999999999999999999999999999875433221111
Q ss_pred ccccCCCCcccccCcccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 466 TFVNGEFGDLGYVAPEYART-------LVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~-------~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
.....++..|+|||+... ..++.++|||||||++|||++ |..||......+ -........ .
T Consensus 159 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--------~~~~~~~~~-~ 227 (269)
T cd05042 159 --KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--------VLKQVVREQ-D 227 (269)
T ss_pred --cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--------HHHHHhhcc-C
Confidence 122335678999998642 356889999999999999999 777876432211 011111110 0
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
..+.++.+.. ........+ ...| + .||++||+++||++.|.
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~---~~~~-~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 IKLPKPQLDL-KYSDRWYEV---MQFC-W-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccCCCCcccc-cCCHHHHHH---HHHH-h-cCcccccCHHHHHHHhc
Confidence 1111111111 122222222 2334 4 58999999999998873
No 163
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=307.45 Aligned_cols=251 Identities=22% Similarity=0.348 Sum_probs=205.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe-eeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE-RLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lV~ 379 (623)
++|...+.+|+|+||.++..+++ +++.+++|.+.... .......+|+.++++++|||||.+.+.++.++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46778899999999999998854 67889999886543 334467899999999999999999999999887 89999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
+|++||++.+.+.... +..+++.+..+++.|+..|+.|||+. +|.|||||+.||+++.+..+||+|||+|+.+.+
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999997654 46789999999999999999999988 999999999999999999999999999999876
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... .....||+-||+||.+.+..|..|+||||+||++|||.+-+.+|...+. ...+.+....
T Consensus 159 ~~~~----a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~----- 221 (426)
T KOG0589|consen 159 EDSL----ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRG----- 221 (426)
T ss_pred chhh----hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhc-----
Confidence 5422 2344599999999999999999999999999999999999999975322 1112111111
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
..++ .......++..+++-++. .+|+.||++.+++.+-
T Consensus 222 ~~~P--lp~~ys~el~~lv~~~l~----~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 222 LYSP--LPSMYSSELRSLVKSMLR----KNPEHRPSALELLRRP 259 (426)
T ss_pred cCCC--CCccccHHHHHHHHHHhh----cCCccCCCHHHHhhCh
Confidence 0111 122355667777765444 8899999999999873
No 164
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.8e-35 Score=307.39 Aligned_cols=198 Identities=21% Similarity=0.253 Sum_probs=168.4
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCC-CCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNR-NLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lV~ 379 (623)
+|...+.||+|+||.||+|+.. +++.||+|++.... ...+.+..|.+++..++|+ +|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777899999999999999965 57789999987532 2345678899999999765 5788889999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999999853 24588999999999999999999999 999999999999999999999999999875322
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 154 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (324)
T cd05587 154 GGKT----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 204 (324)
T ss_pred CCCc----eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 1111 12234899999999999989999999999999999999999999753
No 165
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.5e-35 Score=315.12 Aligned_cols=202 Identities=24% Similarity=0.265 Sum_probs=171.0
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.|...+.||+|+||.||+|... +++.||+|++.... .....+.+|++++.+++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999954 68899999986532 234568889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIRM----GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 99999999998632 4578888899999999999999999 9999999999999999999999999997532110
Q ss_pred CC-------------------------------------------cccccccCCCCcccccCcccccCCCCCcchhHHHH
Q 006982 461 DT-------------------------------------------HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSF 497 (623)
Q Consensus 461 ~~-------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sf 497 (623)
.. ..........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 00 00001112358999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCCC
Q 006982 498 GTVLLELVTGERPTNVA 514 (623)
Q Consensus 498 Gvil~elltg~~P~~~~ 514 (623)
||++|||++|+.||...
T Consensus 235 Gvil~elltG~~Pf~~~ 251 (382)
T cd05625 235 GVILYEMLVGQPPFLAQ 251 (382)
T ss_pred hHHHHHHHhCCCCCCCC
Confidence 99999999999999753
No 166
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-35 Score=308.86 Aligned_cols=201 Identities=21% Similarity=0.249 Sum_probs=172.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||++... +++.||+|+++.... ..+.+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999964 688999999975432 3456888999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+..
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999999643 24689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCcccccccCCCCcccccCccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYAR------TLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 212 (330)
T cd05601 155 NKMV---NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG 212 (330)
T ss_pred CCce---eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCC
Confidence 2221 112235899999999986 456789999999999999999999999753
No 167
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.3e-35 Score=300.59 Aligned_cols=264 Identities=25% Similarity=0.356 Sum_probs=200.9
Q ss_pred cCHHHHHHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC
Q 006982 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK 372 (623)
Q Consensus 295 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 372 (623)
+.+.++..++++|...+.||+|+||.||++.. .+++.+++|.+.........+.+|+.++.++ +|||++++++++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 34455666788999999999999999999996 4688999999876554556788899999988 899999999998754
Q ss_pred C-----eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 373 K-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 373 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
+ ..++|+||+++|+|.++++........+++..++.++.|++.||.|||+. +++||||||+||++++++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 3 57899999999999998864333345789999999999999999999998 999999999999999999999
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccc
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-----VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG 522 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~ 522 (623)
|+|||++.......... ....++..|+|||++... .++.++|||||||++|||++|+.||.......
T Consensus 169 l~dfg~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~---- 240 (291)
T cd06639 169 LVDFGVSAQLTSTRLRR----NTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK---- 240 (291)
T ss_pred Eeecccchhcccccccc----cCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH----
Confidence 99999998654322111 123478899999987543 36889999999999999999999986532211
Q ss_pred cHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 523 NLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 523 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+.+ .... ....+.+ ..+....+..++..|+. .+|++||++.|+++.
T Consensus 241 ~~~~----~~~~-~~~~~~~-------~~~~~~~l~~li~~~l~-~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 TLFK----IPRN-PPPTLLH-------PEKWCRSFNHFISQCLI-KDFEARPSVTHLLEH 287 (291)
T ss_pred HHHH----HhcC-CCCCCCc-------ccccCHHHHHHHHHHhh-cChhhCcCHHHHhcC
Confidence 1111 1100 0000100 11111235556667777 899999999998763
No 168
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.3e-35 Score=296.78 Aligned_cols=251 Identities=27% Similarity=0.457 Sum_probs=191.9
Q ss_pred ceeeccCccEEEEEEeCC-------CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALLED-------GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+.||+|+||.||+|+..+ +..+++|.+.... .....+.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998643 2578889876543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCC---CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-----CeEEeeccc
Q 006982 382 MPNGSLYDLLHPADD---TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-----EPKISDFGL 453 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-----~~kl~Dfgl 453 (623)
+++|+|.+++..... ....++|.+++.++.|++.|++|||+. +++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999964321 224578999999999999999999998 999999999999999887 899999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHh
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLS 532 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~ 532 (623)
++......... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +......
T Consensus 158 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~ 227 (269)
T cd05044 158 ARDIYKSDYYR--KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--------EVLQHVT 227 (269)
T ss_pred ccccccccccc--cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--------HHHHHHh
Confidence 98654322111 1112235688999999998899999999999999999998 99998643211 1111111
Q ss_pred ccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 533 STGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 533 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
..... . .....++ .+.+++..|+. .+|.+||++++|++.|++
T Consensus 228 ~~~~~-~------~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRL-Q------KPENCPD---KIYQLMTNCWA-QDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCcc-C------CcccchH---HHHHHHHHHcC-CCcccCCCHHHHHHHHhC
Confidence 00000 0 0111223 34455567776 899999999999998863
No 169
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.9e-35 Score=302.67 Aligned_cols=256 Identities=20% Similarity=0.222 Sum_probs=195.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36888999999999999999965 68899999986422 23455788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 999999999999532 24688899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
...... ....||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .+........
T Consensus 155 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--------~~~~~~i~~~ 223 (331)
T cd05597 155 DGTVQS---NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNH 223 (331)
T ss_pred CCCccc---cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--------HHHHHHHHcC
Confidence 222111 11248999999999863 4578899999999999999999999965322 1111111111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.....+... ....++++..+++-.+ |.. .++..||++.++++.
T Consensus 224 ~~~~~~~~~---~~~~~~~~~~li~~ll-~~~-~~r~~r~~~~~~l~h 266 (331)
T cd05597 224 KEHFQFPPD---VTDVSEEAKDLIRRLI-CSP-ETRLGRNGLQDFKDH 266 (331)
T ss_pred CCcccCCCc---cCCCCHHHHHHHHHHc-cCc-ccccCCCCHHHHhcC
Confidence 111111000 0113556666666533 543 566678999888876
No 170
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.4e-35 Score=306.85 Aligned_cols=192 Identities=25% Similarity=0.336 Sum_probs=163.9
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCC-CCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGS-VKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|... ++..||+|.++... .....+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999965 57889999987542 233456677777765 4999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++.++..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 152 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK- 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc-
Confidence 999999853 24688999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 153 ---TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred ---eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 1223489999999999988999999999999999999999999975
No 171
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7e-35 Score=297.09 Aligned_cols=263 Identities=21% Similarity=0.303 Sum_probs=197.7
Q ss_pred cCcccceeeccCccEEEEEEe-----CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Ceee
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-----EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERL 376 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 376 (623)
-|.+.+.||+|+||.||++.. .++..|++|.+.... .....+.+|++++++++|||++++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 367788999999999999974 357889999986442 3346789999999999999999999998875 5678
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+++++|.+++... ...++|..++.++.|++.||+|||+. +++||||||+||++++++.++|+|||+++.
T Consensus 85 lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccc
Confidence 999999999999998532 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-------cccccHHHHHH
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPE-------TFKGNLVEWIA 529 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~-------~~~~~l~~~~~ 529 (623)
+....... .......++..|+|||++.+..++.++||||||+++|||++++.|........ ........++.
T Consensus 159 ~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 159 IETDKEYY-TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred cccCccce-eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH
Confidence 64322211 11122346778999999988889999999999999999999887654321100 00001111111
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
...... ...........+.+++..|+. .+|++||+++++++.|+++
T Consensus 238 ~~~~~~----------~~~~~~~~~~~~~~li~~~l~-~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 VLEEGK----------RLPRPPNCPEEVYQLMRKCWE-FQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHcCc----------cCCCCCCCCHHHHHHHHHHcc-CCcccCcCHHHHHHHHHhh
Confidence 111000 000011112346666778887 8999999999999999876
No 172
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-34 Score=292.75 Aligned_cols=253 Identities=25% Similarity=0.367 Sum_probs=186.3
Q ss_pred eeeccCccEEEEEEeCC---CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCC
Q 006982 312 IIGSGRTGTMYKALLED---GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGS 386 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 386 (623)
.||+|+||.||+|...+ +..+++|.++... .....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998653 3568999886543 234578899999999999999999999999889999999999999
Q ss_pred HhhhccCCCC-CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccc
Q 006982 387 LYDLLHPADD-TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLS 465 (623)
Q Consensus 387 L~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~ 465 (623)
|.++++.... .....++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~-- 156 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY-- 156 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCccee--
Confidence 9999965332 223567888889999999999999999 9999999999999999999999999999754322211
Q ss_pred ccccCCCCcccccCcccccCC-------CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 466 TFVNGEFGDLGYVAPEYARTL-------VATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 466 ~~~~~~~gt~~y~aPE~~~~~-------~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
.......++..|+|||++... .++.++||||||+++|||++ |+.||......+ ..... . ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-----~~~~~---~-~~~~ 227 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-----VLTYT---V-REQQ 227 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-----HHHHH---h-hccc
Confidence 111223467889999988532 35789999999999999996 999996532211 00100 0 0011
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
....++.+.. ...+++..+++ .|+ .+|++|||++||++.|+
T Consensus 228 ~~~~~~~~~~-~~~~~~~~l~~---~c~--~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 228 LKLPKPRLKL-PLSDRWYEVMQ---FCW--LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCCccCC-CCChHHHHHHH---HHh--cCcccCCCHHHHHHHhc
Confidence 1111222211 12334444443 454 57999999999998874
No 173
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.3e-36 Score=309.52 Aligned_cols=192 Identities=23% Similarity=0.323 Sum_probs=166.9
Q ss_pred ceeeccCccEEEEEEe----CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 311 NIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
+.||+|+||.||+++. .+|+.||+|++.... .....+..|++++.+++||||+++++++.+....++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 357899999997543 233456789999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 9999999853 34689999999999999999999999 9999999999999999999999999999865432111
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....|++.|+|||.+....++.++|||||||++|||++|+.||..
T Consensus 155 ----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 200 (318)
T cd05582 155 ----AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG 200 (318)
T ss_pred ----eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCC
Confidence 1123489999999999988889999999999999999999999975
No 174
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.7e-35 Score=311.48 Aligned_cols=203 Identities=24% Similarity=0.272 Sum_probs=171.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|.+.+.||+|+||.||+++.. +++.||+|.+.... .....+.+|++++.+++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999954 68899999986532 23456788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999963 24578888899999999999999999 999999999999999999999999999853210
Q ss_pred CCC---------------------------------------cccccccCCCCcccccCcccccCCCCCcchhHHHHHHH
Q 006982 460 IDT---------------------------------------HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTV 500 (623)
Q Consensus 460 ~~~---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvi 500 (623)
... ..........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 000 00000112358999999999999899999999999999
Q ss_pred HHHHHhCCCCCCCC
Q 006982 501 LLELVTGERPTNVA 514 (623)
Q Consensus 501 l~elltg~~P~~~~ 514 (623)
+|||++|+.||...
T Consensus 234 lyell~G~~Pf~~~ 247 (376)
T cd05598 234 LYEMLVGQPPFLAD 247 (376)
T ss_pred eeehhhCCCCCCCC
Confidence 99999999999754
No 175
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-34 Score=291.92 Aligned_cols=252 Identities=21% Similarity=0.296 Sum_probs=193.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
++|...+.||+|++|.||++... ++..+++|.+.... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999854 68999999886432 123468889999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+++++|.+++.. ...+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999853 24578899999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
........ ......++..|+|||++.+..++.++||||||+++|||++|+.||......+ . ..........
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~-~~~~~~~~~~ 225 (263)
T cd06625 155 QTICSSGT-GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA-------A-IFKIATQPTN 225 (263)
T ss_pred cccccccc-cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH-------H-HHHHhccCCC
Confidence 43211111 0012346789999999998889999999999999999999999986432210 0 0111000000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
..+. .....++. .+...|+. .+|.+|||+.|+++.
T Consensus 226 -----~~~~-~~~~~~~~---~li~~~l~-~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 -----PQLP-SHVSPDAR---NFLRRTFV-ENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCC-ccCCHHHH---HHHHHHhh-cCcccCCCHHHHhhC
Confidence 0000 11223333 34446666 889999999999864
No 176
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=8e-35 Score=291.52 Aligned_cols=248 Identities=23% Similarity=0.392 Sum_probs=196.7
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
++|+..+.||+|+||.||+|...+ +..+++|.+..... .+.+.+|++++++++|||++++++++......++++||++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 568888999999999999999765 78999999875543 6789999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+++|.+++... ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.........
T Consensus 82 ~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (256)
T cd06612 82 AGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK 155 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence 99999998532 35689999999999999999999999 9999999999999999999999999999876543211
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
. ....++..|+|||++.+..++.++||||||+++|||++|+.||........ ... ...... +
T Consensus 156 ~----~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-------~~~--~~~~~~-----~ 217 (256)
T cd06612 156 R----NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-------IFM--IPNKPP-----P 217 (256)
T ss_pred c----ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-------hhh--hccCCC-----C
Confidence 1 112368899999999988899999999999999999999999875322110 000 000000 0
Q ss_pred hhh-cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 544 CLV-AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 544 ~l~-~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+. ......+ +.+++..|+. .+|++|||+.||++
T Consensus 218 ~~~~~~~~~~~---~~~~i~~~l~-~~P~~Rps~~~il~ 252 (256)
T cd06612 218 TLSDPEKWSPE---FNDFVKKCLV-KDPEERPSAIQLLQ 252 (256)
T ss_pred CCCchhhcCHH---HHHHHHHHHh-cChhhCcCHHHHhc
Confidence 000 0011223 4445556776 89999999999975
No 177
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.2e-35 Score=303.42 Aligned_cols=193 Identities=24% Similarity=0.313 Sum_probs=163.3
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCC-CCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGS-VKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|... ++..||+|.++... ...+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999965 57889999987532 223445566666654 4899999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~-- 151 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG-- 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--
Confidence 999999853 24588899999999999999999999 999999999999999999999999999986432221
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 152 --KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred --ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 112335899999999999888999999999999999999999999753
No 178
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.1e-35 Score=297.73 Aligned_cols=246 Identities=22% Similarity=0.258 Sum_probs=187.7
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||.||++..+ +|+.+|+|.+.... .....+..|++++.+++||||+++.+++.+....++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 68999999986432 2234556799999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~----- 150 (277)
T cd05607 81 KYHIYNVG--ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT----- 150 (277)
T ss_pred HHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce-----
Confidence 99885432 24588999999999999999999999 999999999999999999999999999986543211
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ............ .. . ...
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~~~~-~~----~--~~~ 219 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV----AKEELKRRTLED-EV----K--FEH 219 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh----hHHHHHHHhhcc-cc----c--ccc
Confidence 112347899999999998889999999999999999999999996432210 011111111110 00 0 001
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 548 KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 548 ~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
....+++.+++ ..|+. .||++||++.|+++.+
T Consensus 220 ~~~~~~~~~li---~~~L~-~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 QNFTEESKDIC---RLFLA-KKPEDRLGSREKNDDP 251 (277)
T ss_pred ccCCHHHHHHH---HHHhc-cCHhhCCCCccchhhh
Confidence 12334444444 44555 9999999998776443
No 179
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=318.40 Aligned_cols=258 Identities=20% Similarity=0.290 Sum_probs=197.6
Q ss_pred cCcccceeeccCccEEEEEEeCCC-cEEEEEEecc-ccccHHHHHHHHHHhCCCC-CCCCcceeE-EEEe------CCee
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDG-TSLMVKRLQD-SQRSEKEFVAEMATLGSVK-NRNLVPLLG-FCMA------KKER 375 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~-~~~~------~~~~ 375 (623)
++++.++|.+|||+.||.|....+ ..+|+|++-. .+.+...+.+|+++|++|+ |+|||.+++ .... ..+.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 456678999999999999997665 9999998754 4456678899999999996 999999999 3322 1367
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
+|.||||++|+|-+++..... ..|++.++++|+.++++|+++||.. +|+|||||||-+||||+.+++.||||||-+.
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 899999999999999964433 3499999999999999999999986 7789999999999999999999999999997
Q ss_pred ccCCCC--Cccccccc---CCCCcccccCcccc---cCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHH
Q 006982 456 LMNPID--THLSTFVN---GEFGDLGYVAPEYA---RTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 456 ~~~~~~--~~~~~~~~---~~~gt~~y~aPE~~---~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~ 527 (623)
-....- ......+. ...-|+.|+|||.+ .+..+++|+|||++||+||-|.....||+......
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la--------- 265 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA--------- 265 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee---------
Confidence 432211 11100110 13468999999976 46788999999999999999999999997532211
Q ss_pred HHHHhccCchhhhhchhhhc---CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 528 IAQLSSTGQLQDAIDKCLVA---KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~---~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
|++....- ..+.+.+..+ +..|++ .+|.+||++.+|++.+.+++.+.-
T Consensus 266 ------------Ilng~Y~~P~~p~ys~~l~~L---I~~mL~-~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 266 ------------ILNGNYSFPPFPNYSDRLKDL---IRTMLQ-PNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred ------------EEeccccCCCCccHHHHHHHH---HHHHhc-cCcccCCCHHHHHHHHHHHhcCCC
Confidence 11111100 1123333333 344555 999999999999999999877643
No 180
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.5e-35 Score=303.21 Aligned_cols=193 Identities=26% Similarity=0.338 Sum_probs=164.4
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCC-CCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGS-VKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++||+|+||.||+|..+ ++..||+|.++... ........|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999965 68899999997542 233456677777765 4899999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+++........
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 152 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR- 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc-
Confidence 999999853 24588999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 153 ---ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred ---eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 12234899999999999989999999999999999999999999753
No 181
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-34 Score=293.43 Aligned_cols=256 Identities=21% Similarity=0.347 Sum_probs=197.0
Q ss_pred ccCcccceeeccCccEEEEEEeCC----CcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED----GTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|+||.||+|...+ ...|++|...... ...+.+.+|+.++++++|||++++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 347778899999999999998643 2468889886543 345678999999999999999999998875 457899
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++|+|.+++... ...+++..++.++.+++.||.|||+. +++||||||+||+++.++.++|+|||+++...
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 85 MELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999643 23589999999999999999999998 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
....... ....++..|+|||.+....++.++||||||+++||+++ |..||...... ....++. .....
T Consensus 159 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~---~~~~~ 227 (270)
T cd05056 159 DESYYKA---SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIGRIE---NGERL 227 (270)
T ss_pred cccceec---CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHH---cCCcC
Confidence 3321111 12224568999999988889999999999999999996 99999653321 1111111 11000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcc
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 589 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~ 589 (623)
. .....+.+ +.+++..|+. .+|.+|||+.++++.|+++..+
T Consensus 228 -~------~~~~~~~~---~~~li~~~l~-~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -P------MPPNCPPT---LYSLMTKCWA-YDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -C------CCCCCCHH---HHHHHHHHcC-CChhhCcCHHHHHHHHHHHHhc
Confidence 0 01112333 4445556776 9999999999999999998654
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-34 Score=294.96 Aligned_cols=249 Identities=21% Similarity=0.313 Sum_probs=192.0
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|...+.||+|+||.||+|.. .++..|++|.+.... .....+.+|++++.+++|||++++++++...+..++|+||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 567788999999999999985 578899999986432 33457889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|..+. .+++.....++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 82 DGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred CCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 999997653 367888899999999999999999 99999999999999999999999999998654321
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.....++..|+|||++.+..++.++||||||+++|||++|+.||.......... ....+........ .
T Consensus 150 -----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~------~ 217 (279)
T cd06619 150 -----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-MPLQLLQCIVDED------P 217 (279)
T ss_pred -----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-chHHHHHHHhccC------C
Confidence 122347899999999998889999999999999999999999996532221111 1111111111000 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.+.......+ +.+++..|+. .+|++||+++|+++.
T Consensus 218 ~~~~~~~~~~~---~~~li~~~l~-~~P~~Rp~~~eil~~ 253 (279)
T cd06619 218 PVLPVGQFSEK---FVHFITQCMR-KQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCcCCHH---HHHHHHHHhh-CChhhCCCHHHHhcC
Confidence 11111112233 4455556776 899999999998864
No 183
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=8.2e-35 Score=302.76 Aligned_cols=193 Identities=20% Similarity=0.260 Sum_probs=166.0
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||++... +++.||+|++.... ...+.+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 57889999997542 2334577899998888 699999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~- 152 (327)
T cd05617 81 GDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT- 152 (327)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc-
Confidence 999998853 24689999999999999999999999 9999999999999999999999999999753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 153 ---TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred ---eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 12234899999999999999999999999999999999999999643
No 184
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.9e-35 Score=297.10 Aligned_cols=246 Identities=23% Similarity=0.360 Sum_probs=193.1
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.|+..+.||+|+||.||+|... ++..|++|.+.... ...+.+.+|++++++++||||+++++++..+...++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3556678999999999999864 57889999886432 33457889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++..+.....
T Consensus 85 ~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 85 GGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 99999999842 4588999999999999999999998 999999999999999999999999999986643221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. ....++..|+|||++.+..++.++||||||+++|||++|+.|+....... ...+.. ... .
T Consensus 157 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~~~~----~~~-----~ 218 (277)
T cd06642 157 KR----NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-----VLFLIP----KNS-----P 218 (277)
T ss_pred hh----hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-----HHhhhh----cCC-----C
Confidence 11 12247889999999998889999999999999999999999986432210 111100 000 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.+.. ... ..+..++..|+. .+|++||++.|++..
T Consensus 219 ~~~~~-~~~---~~~~~li~~~l~-~~p~~Rp~~~~il~~ 253 (277)
T cd06642 219 PTLEG-QYS---KPFKEFVEACLN-KDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCc-ccC---HHHHHHHHHHcc-CCcccCcCHHHHHHh
Confidence 00111 112 234455567776 899999999999984
No 185
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.6e-35 Score=293.89 Aligned_cols=252 Identities=22% Similarity=0.267 Sum_probs=192.7
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|+. .++..|++|++.... .....+.+|+.++.+++|||++++++++...+..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688889999999999999995 568899999986543 33456788999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.++++. ...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06646 89 GGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA 161 (267)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence 99999999853 24588999999999999999999999 999999999999999999999999999987643211
Q ss_pred cccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
. .....++..|+|||.+. ...++.++|||||||++|||++|+.||......+... .+ . ...
T Consensus 162 ~----~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~----~~----~-~~~--- 225 (267)
T cd06646 162 K----RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF----LM----S-KSN--- 225 (267)
T ss_pred c----cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe----ee----e-cCC---
Confidence 1 11234788999999874 3457889999999999999999999986432211100 00 0 000
Q ss_pred hhchhhhc-CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 540 AIDKCLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 540 ~~d~~l~~-~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
...+.+.. ...+.+ +.+++..|+. .+|++||+++++++.|
T Consensus 226 ~~~~~~~~~~~~~~~---~~~li~~~l~-~~P~~Rp~~~~il~~l 266 (267)
T cd06646 226 FQPPKLKDKTKWSST---FHNFVKISLT-KNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCCccccccCHH---HHHHHHHHhh-CChhhCcCHHHHhcCC
Confidence 00000000 011233 3344456665 8999999999998643
No 186
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.3e-35 Score=313.84 Aligned_cols=207 Identities=21% Similarity=0.277 Sum_probs=175.3
Q ss_pred HHHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEe
Q 006982 297 LSDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371 (623)
Q Consensus 297 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 371 (623)
+.++....++|...+.||+|+||.||++... +++.+|+|++.... .....+.+|+.++..++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3444555688999999999999999999965 57889999986422 233457789999999999999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
....++||||+++|+|.+++.. ..++...+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 9999999999999999999852 3477888889999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCC----CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL----VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
|+++.+...... ......||+.|+|||++... .++.++|||||||++|||++|+.||...
T Consensus 187 G~a~~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 250 (371)
T cd05622 187 GTCMKMNKEGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (371)
T ss_pred CceeEcCcCCcc---cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC
Confidence 999876432211 11234589999999998653 3789999999999999999999999753
No 187
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.3e-35 Score=303.18 Aligned_cols=197 Identities=22% Similarity=0.261 Sum_probs=167.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 379 (623)
+|...+.||+|+||.||+|... ++..||+|.+.... .....+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777899999999999999865 57899999987532 2234466777777776 5789999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999999853 24588999999999999999999999 999999999999999999999999999975432
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 154 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 154 DGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred CCCc----cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 1111 1223489999999999999999999999999999999999999975
No 188
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.7e-35 Score=299.28 Aligned_cols=261 Identities=24% Similarity=0.349 Sum_probs=198.0
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEe----
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMA---- 371 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 371 (623)
+.+..+.++|...+.||+|+||.||++... +++.+++|.+.........+.+|+.++.++ +|||++++++++..
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 444556788999999999999999999864 578999998876544556788899999999 69999999998843
Q ss_pred -CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEee
Q 006982 372 -KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450 (623)
Q Consensus 372 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~D 450 (623)
.+..++||||+++|+|.+++.........+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEcc
Confidence 3467999999999999998754333345688999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHH
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLV 525 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~ 525 (623)
||+++.+...... .....|+..|+|||++.. ..++.++|||||||++|||++|+.||........ +.
T Consensus 168 fg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~----~~ 239 (286)
T cd06638 168 FGVSAQLTSTRLR----RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA----LF 239 (286)
T ss_pred CCceeecccCCCc----cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH----Hh
Confidence 9999876432211 122348899999998753 4478899999999999999999999865322110 00
Q ss_pred HHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 526 EWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
..... ......+ ...... .+..++.+|+. .+|++|||+.|+++.
T Consensus 240 ----~~~~~-~~~~~~~----~~~~~~---~~~~li~~~l~-~~p~~Rps~~ell~~ 283 (286)
T cd06638 240 ----KIPRN-PPPTLHQ----PELWSN---EFNDFIRKCLT-KDYEKRPTVSDLLQH 283 (286)
T ss_pred ----hcccc-CCCcccC----CCCcCH---HHHHHHHHHcc-CCcccCCCHHHHhhc
Confidence 00000 0000000 011122 34455667777 999999999999875
No 189
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-34 Score=291.98 Aligned_cols=250 Identities=21% Similarity=0.326 Sum_probs=191.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Cee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 375 (623)
.+|...+.||+|+||.||+|... ++..|++|++.... .....+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888899999999999999864 58899999885431 2234678899999999999999999988763 567
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++++||+++++|.+++.. ...+++...+.++.|++.||+|||+. +|+||||||+||++++++.++|+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999999853 24588999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
.......... ......++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+.......
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--------~~~~~~~~~~ 225 (266)
T cd06651 155 RLQTICMSGT-GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--------AAIFKIATQP 225 (266)
T ss_pred ccccccccCC-ccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--------HHHHHHhcCC
Confidence 6543211111 111234788999999999888999999999999999999999999643211 1111111000
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .+ ..+......++.++.|+. .+|++||+++||++
T Consensus 226 ~-----~~-----~~~~~~~~~~~~li~~~~-~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 T-----NP-----QLPSHISEHARDFLGCIF-VEARHRPSAEELLR 260 (266)
T ss_pred C-----CC-----CCchhcCHHHHHHHHHhc-CChhhCcCHHHHhc
Confidence 0 00 011222333444557888 79999999999975
No 190
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-35 Score=286.75 Aligned_cols=279 Identities=22% Similarity=0.276 Sum_probs=202.6
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEe-----CCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMA-----KKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~ 375 (623)
..|...+.||+|+||.|+++.. .+|..||+|++... ....++-.+|++.|+.++|+||+.+.+.+.. -+..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 3455568899999999999984 57899999999743 3445678899999999999999999998865 3568
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
|+|+|+|+ -+|...++ .++.++......+..|+.+||.|+|+. +|+||||||+|+|++.+...||+|||+|+
T Consensus 102 YiV~elMe-tDL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 102 YLVFELME-TDLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred EEehhHHh-hHHHHHHH----cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccccee
Confidence 99999994 59999996 345589999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCCcccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccH------HHHH
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNL------VEWI 528 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l------~~~~ 528 (623)
..... .........+.|-.|+|||.+. ...|+...||||.|||+.||++|+.-|.+.+........+ .+..
T Consensus 174 ~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 174 YLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred ecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 87643 2223334455789999999875 4579999999999999999999999998754432211100 0000
Q ss_pred HHHhccCchhhhhchhhhc---------CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCCCcccc
Q 006982 529 AQLSSTGQLQDAIDKCLVA---------KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIM 599 (623)
Q Consensus 529 ~~~~~~~~~~~~~d~~l~~---------~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~~~~~~ 599 (623)
-...........+...-.. .........+++-.+. .||.+|+|++|.++.-- ...++..+.+...
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~----fdP~kRita~eAL~hPY--l~~~hdp~dEP~~ 325 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLV----FDPKKRITAEEALAHPY--LAPYHDPEDEPVC 325 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhc----cCccccCCHHHHhcChh--hhhhcCCccCCCC
Confidence 0111111111111111100 1234455566654433 89999999999876432 3444444433333
No 191
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.6e-35 Score=304.96 Aligned_cols=192 Identities=29% Similarity=0.340 Sum_probs=162.8
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHH-HhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMA-TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|... +++.||+|++.... .....+..|.. ++..++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999965 68999999986532 22234455554 46789999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-- 151 (323)
T cd05575 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK-- 151 (323)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--
Confidence 999999863 34688999999999999999999999 999999999999999999999999999875322111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 198 (323)
T cd05575 152 --TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (323)
T ss_pred --ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCC
Confidence 11223489999999999998999999999999999999999999975
No 192
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.6e-34 Score=306.12 Aligned_cols=199 Identities=24% Similarity=0.330 Sum_probs=168.2
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-----eee
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK-----ERL 376 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 376 (623)
+|+..+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999996 478999999986532 23457889999999999999999999998776 789
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+. ++|.+.+. ....+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999997 58888874 235689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
....... ......++..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 153 EEPDESK---HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred cccCccc---cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 5432211 11223478899999998764 47899999999999999999999997643
No 193
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.1e-35 Score=293.64 Aligned_cols=254 Identities=20% Similarity=0.355 Sum_probs=194.6
Q ss_pred cCcccceeeccCccEEEEEEeCC--CcEEEEEEeccc-----------cccHHHHHHHHHHhCC-CCCCCCcceeEEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED--GTSLMVKRLQDS-----------QRSEKEFVAEMATLGS-VKNRNLVPLLGFCMA 371 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~-----------~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 371 (623)
.|+..+.||+|+||.||+|.... +..+++|.+... ......+..|+.++.+ ++|||++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36778899999999999999765 678999987532 1123456778888764 799999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
++..++|+||+++++|.+++.........+++..+++++.|++.||.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988543333456899999999999999999999631 7999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
|.+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||..... .......
T Consensus 159 g~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--------~~~~~~~ 225 (269)
T cd08528 159 GLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--------LSLATKI 225 (269)
T ss_pred cceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--------HHHHHHH
Confidence 9998754422 11223478899999999988899999999999999999999999864321 1111111
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.. .... +. .......+ +..++.+|+. .||++||++.||..+++
T Consensus 226 ~~-~~~~----~~-~~~~~~~~---l~~li~~cl~-~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 VE-AVYE----PL-PEGMYSED---VTDVITSCLT-PDAEARPDIIQVSAMIS 268 (269)
T ss_pred hh-ccCC----cC-CcccCCHH---HHHHHHHHCC-CCCccCCCHHHHHHHhc
Confidence 10 0000 00 01112233 3444557877 99999999999999886
No 194
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.2e-35 Score=301.60 Aligned_cols=192 Identities=24% Similarity=0.316 Sum_probs=164.8
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||++... ++..||+|+++... .....+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 57899999997542 2344567788888777 799999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 152 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT- 152 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc-
Confidence 999998853 24689999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~ 198 (318)
T cd05570 153 ---TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG 198 (318)
T ss_pred ---ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC
Confidence 1123478999999999999999999999999999999999999964
No 195
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.8e-35 Score=293.63 Aligned_cols=238 Identities=24% Similarity=0.376 Sum_probs=185.6
Q ss_pred ceeeccCccEEEEEEeCCCc-----------EEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 311 NIIGSGRTGTMYKALLEDGT-----------SLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
+.||+|+||.||+|...+.. .+++|.+.........+.+|+.++++++|||++++++++.. ...++|+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46899999999999976433 57788776554446788999999999999999999999988 7789999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-------CeEEeecc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-------EPKISDFG 452 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-------~~kl~Dfg 452 (623)
||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 80 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 80 EYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 9999999999996432 2688999999999999999999998 999999999999999888 79999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCC--CCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHH
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
++...... ....++..|+|||++... .++.++||||||+++|||++ |..|+...... .+..
T Consensus 154 ~a~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--------~~~~ 217 (259)
T cd05037 154 IPITVLSR--------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--------EKER 217 (259)
T ss_pred cccccccc--------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--------hHHH
Confidence 99865431 112356789999998876 78999999999999999999 56666543211 1111
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
....... + ..... ..+.+++..|+. .+|.+||++.||++.|+
T Consensus 218 ~~~~~~~--------~-~~~~~---~~~~~li~~~l~-~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 218 FYQDQHR--------L-PMPDC---AELANLINQCWT-YDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHhcCCC--------C-CCCCc---hHHHHHHHHHhc-cChhhCCCHHHHHHhcC
Confidence 0000000 0 00011 455566677776 89999999999998763
No 196
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2e-34 Score=297.42 Aligned_cols=197 Identities=25% Similarity=0.390 Sum_probs=170.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||++... ++..+++|.+.... .....+.+|++++.+++||||+++++++.+++..++|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999965 57888888886432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.++++.. ..+++..+..++.|++.||.|||+.+ +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 81 MDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 9999999999632 45889999999999999999999742 89999999999999999999999999987653211
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 155 ------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 155 ------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred ------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 1223478899999999888899999999999999999999999864
No 197
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.2e-34 Score=290.35 Aligned_cols=249 Identities=22% Similarity=0.303 Sum_probs=194.2
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|...+.||+|+||.||++... ++..+++|.+... ....+.+.+|+.++++++|+|++++++++.+.+..++|+||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677899999999999999965 6889999988543 234567888999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.... +..+++...+.++.|++.||.|||+. +++|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 9999999885432 34678899999999999999999999 999999999999999999999999999986543221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. .....+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......... ..... +
T Consensus 156 ~----~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--------~~~~~~~~~-~~~~~-~- 220 (255)
T cd08219 156 Y----ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--------KNLILKVCQ-GSYKP-L- 220 (255)
T ss_pred c----cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--------HHHHHHHhc-CCCCC-C-
Confidence 1 1123478899999999888899999999999999999999999964321 111111111 11000 0
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
......++. .+..+|+. .+|++||++.|++..
T Consensus 221 ----~~~~~~~~~---~li~~~l~-~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 ----PSHYSYELR---SLIKQMFK-RNPRSRPSATTILSR 252 (255)
T ss_pred ----CcccCHHHH---HHHHHHHh-CCcccCCCHHHHhhc
Confidence 011223333 44446666 899999999999764
No 198
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.5e-34 Score=291.89 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=192.4
Q ss_pred HHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
..+++.+.....||+|+||.||+|... ++..|++|.+.... ...+.+.+|+.++.+++|+||+++++++...+..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 345566767789999999999999954 67889999886543 3456788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCcc--ChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeeccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSV--DWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLAR 455 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l--~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfgla~ 455 (623)
+||+++++|.+++.... ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||++.
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 84 MEQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999996432 234 7888899999999999999999 9999999999999976 6799999999997
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
........ .....+++.|+|||++... .++.++||||||+++|||++|+.||...... ....+......
T Consensus 158 ~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 228 (268)
T cd06624 158 RLAGINPC----TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-----QAAMFKVGMFK 228 (268)
T ss_pred ecccCCCc----cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-----hhhHhhhhhhc
Confidence 65432211 1122378899999998654 3788999999999999999999998642211 01111110000
Q ss_pred cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 534 TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 534 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .+.+ .....+++ ..++.+|+. .+|++|||+.|+++
T Consensus 229 ~-------~~~~-~~~~~~~~---~~li~~~l~-~~p~~Rpt~~~ll~ 264 (268)
T cd06624 229 I-------HPEI-PESLSAEA---KNFILRCFE-PDPDKRASAHDLLQ 264 (268)
T ss_pred c-------CCCC-CcccCHHH---HHHHHHHcC-CCchhCCCHHHHHh
Confidence 0 0000 11122333 344556776 89999999999875
No 199
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-34 Score=307.31 Aligned_cols=197 Identities=20% Similarity=0.273 Sum_probs=169.0
Q ss_pred ccCcccceeeccCccEEEEEEeC---CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE---DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.+|...+.||+|+||.||++... .+..|++|.+... +...+|++++++++||||+++++++......++||||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 46899999999999999999753 3577899987643 2456899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+. ++|.+++. ....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.++|+|||+++......
T Consensus 168 ~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 168 YK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred cC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 96 68888883 235689999999999999999999999 99999999999999999999999999998654322
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
... ......||+.|+|||++....++.++|||||||++|||++|+.||....
T Consensus 240 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 240 DTP--QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ccc--cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 211 1123458999999999999899999999999999999999999997643
No 200
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.2e-34 Score=290.19 Aligned_cols=247 Identities=25% Similarity=0.424 Sum_probs=193.0
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++|...+.||+|+||.||++.. ++..|++|...... ....+.+|+.++.+++|||++++++++..+ ..++|+||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~ 82 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK 82 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence 4578889999999999999975 57789999886543 346788999999999999999999998654 47899999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.... ...+++..++.++.|++.|+.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 83 GNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 99999996432 24688999999999999999999998 99999999999999999999999999997643211
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||..... .+........... +
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~~~----~- 217 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------KEVKECVEKGYRM----E- 217 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhCCCCC----C-
Confidence 11124568999999988889999999999999999998 9999864322 1111111111000 0
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
. ....++ .+..++..|+. .+|++||+++++++.|++
T Consensus 218 -~-~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 -P-PEGCPA---DVYVLMTSCWE-TEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -C-CCcCCH---HHHHHHHHHcC-CChhhCcCHHHHHHHHcc
Confidence 0 011223 34455667887 899999999999998863
No 201
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4e-35 Score=294.24 Aligned_cols=251 Identities=28% Similarity=0.410 Sum_probs=192.1
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHH---HHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEK---EFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
|+..+.||+|+||+||+++.. ++..+|+|++........ ....|+.++.+++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 456789999999999999976 466899999977654333 2345999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++. ....+++..+..++.|+++||+|||+. +|+|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~- 152 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN- 152 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT-
T ss_pred cccccccccc----ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 9999999996 346689999999999999999999999 99999999999999999999999999998642111
Q ss_pred cccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
.......++..|+|||++. ...++.++||||+|+++|+|++|..||...... ........... ....
T Consensus 153 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-----~~~~~~~~~~~----~~~~ 220 (260)
T PF00069_consen 153 ---ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-----DQLEIIEKILK----RPLP 220 (260)
T ss_dssp ---SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-----HHHHHHHHHHH----THHH
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccccccch-----hhhhhhhhccc----cccc
Confidence 1223345789999999998 888999999999999999999999999753110 00111111000 0000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.......... ..+.++...|+. .||++||++.++++
T Consensus 221 ~~~~~~~~~~---~~l~~li~~~l~-~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 221 SSSQQSREKS---EELRDLIKKMLS-KDPEQRPSAEELLK 256 (260)
T ss_dssp HHTTSHTTSH---HHHHHHHHHHSS-SSGGGSTTHHHHHT
T ss_pred ccccccchhH---HHHHHHHHHHcc-CChhHCcCHHHHhc
Confidence 0000001112 344444555665 99999999999875
No 202
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.1e-34 Score=287.80 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=192.3
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHh
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLY 388 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 388 (623)
++||+|+||.||++...+++.|++|.+..... ....+.+|++++++++|+||+++++++.+....++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36899999999999987799999998875432 4567899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccc
Q 006982 389 DLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFV 468 (623)
Q Consensus 389 ~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 468 (623)
+++... ...+++..++.++.+++.+++|||+. +++||||||+||++++++.++|+|||+++.......... .
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~--~ 152 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS--D 152 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec--c
Confidence 998643 23578999999999999999999999 999999999999999999999999999986542111111 0
Q ss_pred cCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 469 NGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 469 ~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
.....+..|+|||++.+..++.++||||||+++|||+| |..||...... .....+.. .... . ..
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-----~~~~~~~~---~~~~------~-~~ 217 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-----QTRERIES---GYRM------P-AP 217 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-----HHHHHHhc---CCCC------C-CC
Confidence 11223567999999988889999999999999999999 88888643211 11111110 0000 0 01
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 548 KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 548 ~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
...+. .+..++..|+. .+|.+||++.|+++.|+
T Consensus 218 ~~~~~---~~~~li~~~l~-~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPE---EIYRLMLQCWA-YDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCH---HHHHHHHHHhc-cChhhCcCHHHHHHHhh
Confidence 11122 34555566776 89999999999999886
No 203
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-34 Score=309.38 Aligned_cols=195 Identities=21% Similarity=0.246 Sum_probs=166.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
..|.+.+.||+|+||.||++... .++.|++|... ...+.+|++++++++|+|||++++++......++|+||+.
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 46888999999999999999975 47889999642 2345689999999999999999999999999999999995
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
++|.+++... ...++|.+++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 244 -~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 244 -SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred -CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 6998888532 24689999999999999999999999 9999999999999999999999999999865432111
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
....+..||..|+|||++.+..++.++|||||||++|||++|..|+..
T Consensus 317 --~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~ 364 (461)
T PHA03211 317 --PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS 364 (461)
T ss_pred --ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence 111234589999999999999999999999999999999998876543
No 204
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-35 Score=288.96 Aligned_cols=204 Identities=22% Similarity=0.295 Sum_probs=171.6
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCC-CcceeEEEEeCC------
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRN-LVPLLGFCMAKK------ 373 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------ 373 (623)
..|...++||+|+||.||+|+ ..+|+.||+|++..... ......+|+.++.+++|+| ||++++++.+.+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 346667789999999999999 45789999999976533 3455689999999999999 999999998877
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++|+||+.. +|..++.........++......++.|+.+||+|||++ +|+||||||+||||+++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 67899999976 99999975443223466678899999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
|+...-... .....++|..|+|||++.+. .|+...||||+|||+.||++++.-|.+..+
T Consensus 167 Ara~~ip~~----~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se 226 (323)
T KOG0594|consen 167 ARAFSIPMR----TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE 226 (323)
T ss_pred HHHhcCCcc----cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence 996552211 12334579999999999876 789999999999999999999998877544
No 205
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.9e-35 Score=304.24 Aligned_cols=193 Identities=28% Similarity=0.350 Sum_probs=163.5
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHH-HhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMA-TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+++.. +|+.+|+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999954 68999999986532 22344555555 46789999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|..++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~- 152 (325)
T cd05604 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT- 152 (325)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC-
Confidence 999998853 35688999999999999999999999 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (325)
T cd05604 153 ---TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR 199 (325)
T ss_pred ---cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC
Confidence 12234899999999999999999999999999999999999999753
No 206
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.3e-34 Score=295.40 Aligned_cols=198 Identities=27% Similarity=0.389 Sum_probs=171.0
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
|+..+.||+|+||.||++... +++.||+|.+.... .....+..|+.++.+++|+|++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999965 68899999886532 2234577899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999999885432 24588999999999999999999998 99999999999999999999999999997653221
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. .....|+..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 157 ~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~ 204 (285)
T cd05630 157 T-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 204 (285)
T ss_pred c-----ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 1 12335899999999999889999999999999999999999999753
No 207
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-34 Score=294.90 Aligned_cols=258 Identities=21% Similarity=0.319 Sum_probs=198.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|+..+.||+|+||+||++... +++.|++|++... ....+.+.+|++++..++||||+++++++......++|+||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45777889999999999999965 6888999987543 23456789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++.. ...+++..+..++.+++.++.|||+.. +++||||||+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 85 MDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred CCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 999999999853 245899999999999999999999742 79999999999999999999999999987543211
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccc---ccHHHHHHHHhccCchh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK---GNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~---~~l~~~~~~~~~~~~~~ 538 (623)
. ....|+..|+|||++.+..++.++|||||||++||+++|+.||.......... ....++.........
T Consensus 159 ~------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (284)
T cd06620 159 A------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-- 230 (284)
T ss_pred c------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--
Confidence 1 12347899999999988889999999999999999999999997644321111 111122222111100
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
+.+.....+ ..+..++..|+. .||++||++.|++++..
T Consensus 231 ----~~~~~~~~~---~~~~~li~~~l~-~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 231 ----PRLPSSDFP---EDLRDFVDACLL-KDPTERPTPQQLCAMPP 268 (284)
T ss_pred ----CCCCchhcC---HHHHHHHHHHhc-CCcccCcCHHHHhcCcc
Confidence 000000012 234455567877 99999999999998743
No 208
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.9e-34 Score=297.69 Aligned_cols=200 Identities=20% Similarity=0.335 Sum_probs=168.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|..+ ++..||+|.++... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888899999999999999865 67889999986432 2345677899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++ +|.+++... +..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 975 888887532 24578899999999999999999999 99999999999999999999999999997643221
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
.. .....+++.|+|||.+.+ ..++.++|||||||++|||+||+.||....
T Consensus 159 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 159 KT----YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred cc----cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 112347889999998864 467899999999999999999999997643
No 209
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.8e-34 Score=296.14 Aligned_cols=248 Identities=24% Similarity=0.384 Sum_probs=194.2
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.+|...+.||+|+||.||++.. .++..|++|.+.... ...+.+.+|+.+++.++|+|++++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 5688889999999999999995 578999999986543 34466888999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred CCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 99999999842 4578899999999999999999999 999999999999999999999999999986543222
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. ....+++.|+|||.+.+..++.++|||||||++|||++|+.||........... ..... ......
T Consensus 171 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--------~~~~~-~~~~~~ 237 (297)
T cd06656 171 KR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--------IATNG-TPELQN 237 (297)
T ss_pred Cc----CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--------eccCC-CCCCCC
Confidence 11 123478899999999988899999999999999999999999965332111000 00000 000000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.......+ ..++..|+. .+|++||+++++++
T Consensus 238 ----~~~~~~~~---~~li~~~l~-~~p~~Rps~~~il~ 268 (297)
T cd06656 238 ----PERLSAVF---RDFLNRCLE-MDVDRRGSAKELLQ 268 (297)
T ss_pred ----ccccCHHH---HHHHHHHcc-CChhhCcCHHHHhc
Confidence 00112222 334445665 89999999999987
No 210
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.2e-36 Score=293.08 Aligned_cols=247 Identities=20% Similarity=0.337 Sum_probs=198.1
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
.+|+..+.||+|.||.|-+|. +..|+.||||.+++.. .+.-.+.+|+++|..++||||+.++.+|++.+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 356777899999999999998 5789999999997654 23345789999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||..+|.|++++. ..+.+++....+++.||..|+.|+|.+ +++|||||-+|||+|+++++||+|||++-.+..
T Consensus 133 EYaS~GeLYDYiS----er~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 133 EYASGGELYDYIS----ERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EecCCccHHHHHH----HhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 9999999999995 446799999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVAT-PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
. .+..+-+|++-|.+||.+.+.+|. +.+|.||+||+||.++.|..||++.+ ....+++......
T Consensus 206 -~----kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--------hk~lvrQIs~GaY-- 270 (668)
T KOG0611|consen 206 -K----KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--------HKRLVRQISRGAY-- 270 (668)
T ss_pred -c----cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--------HHHHHHHhhcccc--
Confidence 2 233334589999999999998875 78999999999999999999998632 2233333322110
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.....+.....+++-.+. .+|++|.|+.||....-
T Consensus 271 -------rEP~~PSdA~gLIRwmLm----VNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 271 -------REPETPSDASGLIRWMLM----VNPERRATIEDIASHWW 305 (668)
T ss_pred -------cCCCCCchHHHHHHHHHh----cCcccchhHHHHhhhhe
Confidence 001112223333332222 77999999999987763
No 211
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.4e-34 Score=295.13 Aligned_cols=197 Identities=26% Similarity=0.365 Sum_probs=170.6
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
|+..+.||+|+||.||++... +++.+|+|.+.... .....+.+|++++.+++|+|++++.+++..++..++|+||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566789999999999999864 68899999986542 2234577899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 99999999886432 24689999999999999999999999 99999999999999999999999999997654321
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
. .....|+..|+|||++.+..++.++|+||||+++|||++|..||..
T Consensus 157 ~-----~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 157 S-----IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred c-----ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 1 1233589999999999988899999999999999999999999975
No 212
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.7e-34 Score=287.95 Aligned_cols=249 Identities=20% Similarity=0.334 Sum_probs=196.6
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|+||.||.++. .++..+++|.+... ....+.+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477789999999999999884 46889999987643 23456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++|+|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999996432 35689999999999999999999998 99999999999999999999999999998764322
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
. ......+++.|+|||+..+..++.++||||||+++|||++|..||..... .+........ .....
T Consensus 156 ~----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~-~~~~~- 221 (256)
T cd08221 156 S----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIVQG-NYTPV- 221 (256)
T ss_pred c----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcC-CCCCC-
Confidence 1 12234578999999999888889999999999999999999999864322 1111111111 00000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
......++. .++..|+. .+|.+||++.|+++.
T Consensus 222 -----~~~~~~~~~---~~i~~~l~-~~p~~R~s~~~ll~~ 253 (256)
T cd08221 222 -----VSVYSSELI---SLVHSLLQ-QDPEKRPTADEVLDQ 253 (256)
T ss_pred -----ccccCHHHH---HHHHHHcc-cCcccCCCHHHHhhC
Confidence 011233333 44456776 889999999999875
No 213
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-34 Score=292.20 Aligned_cols=246 Identities=23% Similarity=0.340 Sum_probs=193.9
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|...+.||.|++|.||+|... +++.|++|.+.... .....+.+|++++++++|+|++++++++.+....++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5777889999999999999965 68899999986542 33457889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||+++.......
T Consensus 82 ~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 82 GGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 99999999953 2689999999999999999999999 999999999999999999999999999987754321
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. ....++..|+|||++.+..++.++||||||+++|||+||+.||...... ....... .. ..
T Consensus 154 ~~----~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~-~~-----~~ 215 (274)
T cd06609 154 KR----NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIP-KN-----NP 215 (274)
T ss_pred cc----ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhh-hc-----CC
Confidence 11 1224778899999999888999999999999999999999999643211 1111000 00 00
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+.+.....++++ ..++..|+. .+|++||+++++++
T Consensus 216 ~~~~~~~~~~~~---~~~l~~~l~-~~p~~Rpt~~~il~ 250 (274)
T cd06609 216 PSLEGNKFSKPF---KDFVSLCLN-KDPKERPSAKELLK 250 (274)
T ss_pred CCCcccccCHHH---HHHHHHHhh-CChhhCcCHHHHhh
Confidence 111111122333 334445665 89999999999976
No 214
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.4e-34 Score=288.58 Aligned_cols=238 Identities=23% Similarity=0.372 Sum_probs=181.8
Q ss_pred ceeeccCccEEEEEEeCC-------------CcEEEEEEeccccc-cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 311 NIIGSGRTGTMYKALLED-------------GTSLMVKRLQDSQR-SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
+.||+|+||.||+|++.+ ...|++|.+..... ....+.+|+.++.+++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 23588888765433 3456888999999999999999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC-------eEEe
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE-------PKIS 449 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~-------~kl~ 449 (623)
+|+||+++|+|..+++.. ...+++..+++++.|++.||+|||+. +|+||||||+|||++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 999999999999988632 24589999999999999999999999 9999999999999987664 8999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCCcccccccHHHH
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELV-TGERPTNVAKAPETFKGNLVEW 527 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~ell-tg~~P~~~~~~~~~~~~~l~~~ 527 (623)
|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..|+......+ . .
T Consensus 155 d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~-~- 219 (262)
T cd05077 155 DPGIPITVLSR--------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-----K-E- 219 (262)
T ss_pred CCCCCccccCc--------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-----H-H-
Confidence 99998755321 1223678899999886 466899999999999999998 5888775422110 0 0
Q ss_pred HHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 528 IAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 528 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
..... .. . ......+ .+..++..|+. .||.+||++.++++.+
T Consensus 220 --~~~~~-~~-~------~~~~~~~---~~~~li~~cl~-~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 220 --RFYEG-QC-M------LVTPSCK---ELADLMTHCMN-YDPNQRPFFRAIMRDI 261 (262)
T ss_pred --HHHhc-Cc-c------CCCCChH---HHHHHHHHHcC-CChhhCcCHHHHHHhc
Confidence 00000 00 0 0011123 34455567776 9999999999998875
No 215
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.6e-35 Score=295.29 Aligned_cols=237 Identities=22% Similarity=0.335 Sum_probs=181.1
Q ss_pred eeeccCccEEEEEEeCC-------------------------CcEEEEEEeccccc-cHHHHHHHHHHhCCCCCCCCcce
Q 006982 312 IIGSGRTGTMYKALLED-------------------------GTSLMVKRLQDSQR-SEKEFVAEMATLGSVKNRNLVPL 365 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l 365 (623)
.||+|+||.||+|.+.. ...|++|.+..... ....+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13588888865432 34568889999999999999999
Q ss_pred eEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-
Q 006982 366 LGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF- 444 (623)
Q Consensus 366 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~- 444 (623)
++++.+....++||||+++|+|..++... ...+++..++.++.|+++||+|||+. +|+||||||+||++++++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCc
Confidence 99999999999999999999999998532 24688999999999999999999998 999999999999997644
Q ss_pred ------CeEEeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHH-hCCCCCCCCCC
Q 006982 445 ------EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELV-TGERPTNVAKA 516 (623)
Q Consensus 445 ------~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~ell-tg~~P~~~~~~ 516 (623)
.++++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.....
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred ccCccceeeecCCccccccccc--------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 3799999988653221 11236788999998865 56899999999999999995 78988865322
Q ss_pred cccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 517 PETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 517 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.+ ...+..... . .. .... ..+..++..|+. .+|++||++.+|++.|
T Consensus 228 ~~-----~~~~~~~~~---~--------~~-~~~~---~~~~~li~~cl~-~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 SE-----KERFYEKKH---R--------LP-EPSC---KELATLISQCLT-YEPTQRPSFRTILRDL 273 (274)
T ss_pred HH-----HHHHHHhcc---C--------CC-CCCC---hHHHHHHHHHcc-cChhhCcCHHHHHHhh
Confidence 11 111111000 0 00 0111 234556667877 9999999999999877
No 216
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2e-34 Score=289.74 Aligned_cols=254 Identities=20% Similarity=0.338 Sum_probs=195.3
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~ 379 (623)
+|...+.||+|+||.||++.. .++..+++|.+.... ...+.+..|++++++++|||++++++++.. ....++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 467788999999999999985 467889999886432 334568889999999999999999998764 34578999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC--CCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC--NPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~--~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
||+++++|.+++.........+++..++.++.+++.||.|||..+ ..+++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999654334567999999999999999999999321 229999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
...... .....++..|+|||.+....++.++||||||+++|+|++|+.||..... ....... .....
T Consensus 161 ~~~~~~----~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~-~~~~~ 227 (265)
T cd08217 161 GHDSSF----AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKI-KEGKF 227 (265)
T ss_pred cCCccc----ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHH-hcCCC
Confidence 543211 1223478999999999988899999999999999999999999975321 1111111 11110
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.+. .... ..+..++..|+. .+|++||++.+|++.
T Consensus 228 -----~~~~-~~~~---~~~~~l~~~~l~-~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -----RRIP-YRYS---SELNEVIKSMLN-VDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCCc-cccC---HHHHHHHHHHcc-CCcccCCCHHHHhhC
Confidence 0011 1112 344555667777 899999999999864
No 217
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.6e-34 Score=300.01 Aligned_cols=198 Identities=20% Similarity=0.255 Sum_probs=168.0
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 379 (623)
+|...+.||+|+||.||++... ++..||+|++.... ...+.+..|.+++..+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999864 68899999987532 23345778888888885 567888999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++.++..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999999853 24689999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 154 DGV----TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred CCc----cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 111 112234899999999999888999999999999999999999999753
No 218
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.8e-34 Score=289.19 Aligned_cols=253 Identities=21% Similarity=0.316 Sum_probs=183.3
Q ss_pred eeeccCccEEEEEEeCCC---cEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCC
Q 006982 312 IIGSGRTGTMYKALLEDG---TSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGS 386 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 386 (623)
.||+|+||.||+|...++ ..+++|.+.... ...+.+.+|+..++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985443 345666665432 345678999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccc
Q 006982 387 LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466 (623)
Q Consensus 387 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~ 466 (623)
|.++++.........++.....++.|++.||+|||+. +++||||||+|||++.++.++|+|||++........ ..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~--~~ 156 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY--IE 156 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchh--hh
Confidence 9999975433334567778889999999999999998 999999999999999999999999999864322111 11
Q ss_pred cccCCCCcccccCcccccC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 467 FVNGEFGDLGYVAPEYART-------LVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 467 ~~~~~~gt~~y~aPE~~~~-------~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
......++..|+|||++.. ..++.++||||||+++|||++ |..||..... .+........ ...
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~~~~~~-~~~ 227 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--------REVLNHVIKD-QQV 227 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHhh-ccc
Confidence 1123347889999998743 245789999999999999997 4667653221 1111111111 112
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.+.++.+... ..+.+..++ ..|+ .+|++||++++|++.|.
T Consensus 228 ~~~~~~~~~~-~~~~~~~l~---~~c~--~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 KLFKPQLELP-YSERWYEVL---QFCW--LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCCccCCC-CcHHHHHHH---HHHh--hCcccCCCHHHHHHHhc
Confidence 2233332221 233333333 3455 56999999999998874
No 219
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-34 Score=294.63 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=197.6
Q ss_pred cCHHHHHHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEe-
Q 006982 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMA- 371 (623)
Q Consensus 295 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~- 371 (623)
.++.++..+.+.|+..+.||+|+||.||+|.. .+++.+++|.+.........+..|+.++.++ +|+|++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 35566666778899999999999999999996 4688999999866555556788899999888 69999999999853
Q ss_pred -----CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 372 -----KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 372 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
....+++|||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.+
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCE
Confidence 356789999999999999986433 24578888999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccc
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFK 521 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~ 521 (623)
+|+|||++......... .....|+..|+|||.+. ...++.++|||||||++|||++|+.||.........
T Consensus 161 ~l~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~- 235 (282)
T cd06636 161 KLVDFGVSAQLDRTVGR----RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL- 235 (282)
T ss_pred EEeeCcchhhhhccccC----CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-
Confidence 99999998765322111 12234788999999875 345788999999999999999999999643221110
Q ss_pred ccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.... ......+.....+.+ +.+++..|+. .+|.+||++.|+++
T Consensus 236 -------~~~~------~~~~~~~~~~~~~~~---~~~li~~cl~-~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 -------FLIP------RNPPPKLKSKKWSKK---FIDFIEGCLV-KNYLSRPSTEQLLK 278 (282)
T ss_pred -------hhHh------hCCCCCCcccccCHH---HHHHHHHHhC-CChhhCcCHHHHhc
Confidence 0000 000111111112233 4444456666 99999999999864
No 220
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.7e-35 Score=306.22 Aligned_cols=192 Identities=26% Similarity=0.314 Sum_probs=161.6
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHH-HhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMA-TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||++... ++..||+|++.... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999965 57789999986532 22234444444 46788999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+.+.....++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~- 152 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT- 152 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC-
Confidence 999999863 24577888889999999999999999 9999999999999999999999999999754321111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (325)
T cd05602 153 ---TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred ---cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence 1223489999999999999999999999999999999999999975
No 221
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.6e-35 Score=301.92 Aligned_cols=192 Identities=27% Similarity=0.332 Sum_probs=162.3
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHH-HhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMA-TLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
++||+|+||.||+|+.. ++..||+|++.... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 68899999986532 22334555554 57889999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|..++.. ...+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~- 152 (321)
T cd05603 81 GELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET- 152 (321)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc-
Confidence 999988853 34578888899999999999999998 9999999999999999999999999998753221111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (321)
T cd05603 153 ---TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred ---cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence 1223489999999999988899999999999999999999999975
No 222
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3e-34 Score=290.40 Aligned_cols=256 Identities=21% Similarity=0.387 Sum_probs=193.6
Q ss_pred CcccceeeccCccEEEEEEeC----CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------
Q 006982 307 FSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------ 373 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 373 (623)
|...+.||+|+||.||+|.+. ++..|++|++.... ...+++.+|++++++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999853 36789999987543 23456889999999999999999999886542
Q ss_pred eeeEEEecCCCCCHhhhccCCC--CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 374 ERLLVYKHMPNGSLYDLLHPAD--DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
..++++||+++|+|.+++.... .....+++...++++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999998874322 1123578899999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
|+++.......... .....+++.|++||.+....++.++||||||+++|||++ |+.||...... .+..+...
T Consensus 158 g~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQ--GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-----EIYNYLIK 230 (273)
T ss_pred cccccccCCcceec--CCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-----HHHHHHHc
Confidence 99987643221111 111234678999999988888999999999999999999 88887643211 11111111
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 586 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i 586 (623)
..... ........+.+++..|+. .+|++||++.|+++.|+++
T Consensus 231 ---~~~~~----------~~~~~~~~~~~l~~~~l~-~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 ---GNRLK----------QPPDCLEDVYELMCQCWS-PEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---CCcCC----------CCCCCCHHHHHHHHHHcC-CChhhCcCHHHHHHHHHhh
Confidence 10000 001112356667778887 9999999999999999876
No 223
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.8e-34 Score=294.54 Aligned_cols=248 Identities=22% Similarity=0.381 Sum_probs=194.0
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.+|+..+.||.|++|.||+|.. .+++.|++|.+.... ...+.+.+|+++++.++|||++++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 3578889999999999999985 578999999886543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++.++..++.+++.|++|||+. +++||||||+||++++++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 99 AGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999842 3589999999999999999999999 999999999999999999999999999886544322
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. ....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ......... .......
T Consensus 171 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--------~~~~~~~~~-~~~~~~~ 237 (296)
T cd06655 171 KR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATN-GTPELQN 237 (296)
T ss_pred cC----CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc-CCcccCC
Confidence 11 1234788999999999888999999999999999999999999653221 001100000 0000000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.......+. .++..|+. .+|++||++.+++.
T Consensus 238 ----~~~~~~~~~---~li~~~l~-~dp~~Rpt~~~il~ 268 (296)
T cd06655 238 ----PEKLSPIFR---DFLNRCLE-MDVEKRGSAKELLQ 268 (296)
T ss_pred ----cccCCHHHH---HHHHHHhh-cChhhCCCHHHHhh
Confidence 011223333 34446665 89999999999874
No 224
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5.2e-34 Score=289.61 Aligned_cols=246 Identities=21% Similarity=0.323 Sum_probs=194.0
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.|+..+.||+|+||.||+|... ++..|++|.+.... .....+.+|++++++++|||++++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667788999999999999965 58899999886432 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++|+|.+++.. ..+++.+...++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 85 ~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 85 GGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 99999999852 3578889999999999999999998 999999999999999999999999999986643221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. ....++..|+|||++.+..++.++|||||||++|||++|..||....... ..... ....
T Consensus 157 ~~----~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~-~~~~------ 217 (277)
T cd06640 157 KR----NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--------VLFLI-PKNN------ 217 (277)
T ss_pred cc----ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--------Hhhhh-hcCC------
Confidence 11 12246788999999988889999999999999999999999986432210 00000 0000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...........+.+++..|+. .+|++||++.|++..
T Consensus 218 ---~~~~~~~~~~~~~~li~~~l~-~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 ---PPTLTGEFSKPFKEFIDACLN-KDPSFRPTAKELLKH 253 (277)
T ss_pred ---CCCCchhhhHHHHHHHHHHcc-cCcccCcCHHHHHhC
Confidence 000011122334455566776 899999999999766
No 225
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.7e-34 Score=286.94 Aligned_cols=249 Identities=20% Similarity=0.319 Sum_probs=192.3
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-CeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-KERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e 380 (623)
.|...+.||+|++|.||++..+ +++.+++|++.... ...+.+.+|++++++++|+|++++++.+... ...++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 3777899999999999999965 57889999986432 3345688999999999999999999887644 45789999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++.... ...+++.+++.++.+++.|++|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 999999999996432 35689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... .....+++.|+|||+..+..++.++||||||++++||++|+.||..... ......... +....
T Consensus 156 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--------~~~~~~~~~-~~~~~- 221 (257)
T cd08223 156 CDM----ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--------NSLVYRIIE-GKLPP- 221 (257)
T ss_pred CCc----cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHh-cCCCC-
Confidence 211 1223478899999999998899999999999999999999999864221 111111111 11100
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+. ...+. .+.+++..|+. .+|++||++.++++.
T Consensus 222 ----~~-~~~~~---~~~~li~~~l~-~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 222 ----MP-KDYSP---ELGELIATMLS-KRPEKRPSVKSILRQ 254 (257)
T ss_pred ----Cc-cccCH---HHHHHHHHHhc-cCcccCCCHHHHhcC
Confidence 00 11222 34455556766 899999999999753
No 226
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-34 Score=301.05 Aligned_cols=193 Identities=22% Similarity=0.303 Sum_probs=164.1
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
...+|...+.||+|+||.||+|... ++..||+|..... ....|+.++.+++||||+++++++......++|+||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 138 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH 138 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence 3457999999999999999999965 5678899875432 234689999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+. |+|.+++.. ....++|..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 139 ~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 139 YS-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred cC-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 95 688888853 235689999999999999999999999 99999999999999999999999999997533211
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTN 512 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~ 512 (623)
. ..+..||..|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 212 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 212 A-----FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred c-----cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 1 112348999999999999899999999999999999999666653
No 227
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.1e-34 Score=288.24 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=193.7
Q ss_pred cCcccceeeccCccEEEEEEeCCCcEEEEEEecccc-------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
+|...+.||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 467788999999999999998889999999886432 1234588899999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 9999999999999532 4578999999999999999999998 99999999999999999999999999998653
Q ss_pred CCCCc--ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 459 PIDTH--LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 459 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
..... .........++..|+|||++.+..++.++||||||+++|||++|+.||...... ............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~ 226 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-------AAMFYIGAHRGL 226 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-------HHHHHhhhccCC
Confidence 21111 111122345789999999999888999999999999999999999999643211 000000000000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. +.+. ....+++.. +...|+. .+|++||++.|++.
T Consensus 227 ~-----~~~~-~~~~~~~~~---~i~~~l~-~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 M-----PRLP-DSFSAAAID---FVTSCLT-RDQHERPSALQLLR 261 (265)
T ss_pred C-----CCCC-CCCCHHHHH---HHHHHhc-CCcccCCCHHHHhc
Confidence 0 0111 123334444 4445666 88999999999875
No 228
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.6e-34 Score=298.64 Aligned_cols=256 Identities=18% Similarity=0.196 Sum_probs=193.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+++.+ +++.+|+|++.... .....+..|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999965 47789999986422 22345788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 999999999999642 24688999999999999999999999 999999999999999999999999999976533
Q ss_pred CCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||..... .+........
T Consensus 155 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~ 223 (332)
T cd05623 155 DGTVQ---SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNH 223 (332)
T ss_pred CCcce---ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCC
Confidence 22111 11235899999999986 34678999999999999999999999975322 1112211111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.....+.. . .....+++..+++-.+ |.. .++..|+++.|+++.
T Consensus 224 ~~~~~~p~-~--~~~~s~~~~~li~~ll-~~~-~~r~~r~~~~~~~~h 266 (332)
T cd05623 224 KERFQFPA-Q--VTDVSEDAKDLIRRLI-CSR-EHRLGQNGIEDFKQH 266 (332)
T ss_pred CccccCCC-c--cccCCHHHHHHHHHHc-cCh-hhhcCCCCHHHHhCC
Confidence 10000000 0 0123455666665433 433 555668899998766
No 229
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=6.7e-34 Score=289.83 Aligned_cols=200 Identities=25% Similarity=0.338 Sum_probs=170.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|+..+.||+|++|.||+|..+ +++.|++|++.... ...+.+.+|++++++++|||++++++++......++|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35778899999999999999976 58999999886432 234567899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|..++.. ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999999888742 24589999999999999999999998 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 154 ~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~ 205 (286)
T cd07847 154 GDD----YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS 205 (286)
T ss_pred ccc----ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 211 112236788999999865 557899999999999999999999997543
No 230
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.2e-34 Score=290.60 Aligned_cols=256 Identities=23% Similarity=0.411 Sum_probs=196.0
Q ss_pred ccCcccceeeccCccEEEEEEeC------CCcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
++|.....||+|+||.||+|+.+ +...+++|.+..... ..+.+.+|++++++++|+|++++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46788899999999999999964 245789998865433 3467899999999999999999999999988999
Q ss_pred EEEecCCCCCHhhhccCCCCC-----CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 377 LVYKHMPNGSLYDLLHPADDT-----GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
+|+||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999654321 12689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHH
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQ 530 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~ 530 (623)
|+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .. +..
T Consensus 162 ~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-----~~---~~~ 230 (275)
T cd05046 162 SLSKDVYNSEY---YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-----EV---LNR 230 (275)
T ss_pred ccccccCcccc---cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-----HH---HHH
Confidence 99875432111 11122345778999999988888999999999999999999 77888542211 11 111
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
.. ....... .....++ .+.+++..|+. .+|++||++.|++..|.
T Consensus 231 ~~-~~~~~~~-----~~~~~~~---~l~~~i~~~l~-~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQ-AGKLELP-----VPEGCPS---RLYKLMTRCWA-VNPKDRPSFSELVSALG 274 (275)
T ss_pred HH-cCCcCCC-----CCCCCCH---HHHHHHHHHcC-CCcccCCCHHHHHHHhc
Confidence 11 0000000 0111222 34455556766 89999999999999875
No 231
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.2e-34 Score=293.34 Aligned_cols=200 Identities=23% Similarity=0.336 Sum_probs=169.2
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|++|.||+|+.. ++..|++|++.... ...+.+.+|+.++.+++|||++++++++.++...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999965 68899999986432 2346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ ++|.+++.... .+..+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 68988886433 235689999999999999999999999 99999999999999999999999999997654321
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. ......+++.|+|||++.+ ..++.++||||||+++|||+||+.||...
T Consensus 156 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 156 R----VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred c----cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 1 1122346889999998865 45688999999999999999999999754
No 232
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.1e-34 Score=287.45 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=194.8
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|+||.+|++.. .+++.|++|.+... ....+++.+|++++++++|||++++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477889999999999999985 46889999998643 23345788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++.... ...+++.+++.++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 99999999986432 24578999999999999999999998 99999999999999999999999999998654322
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ....|++.|+|||+..+..++.++|||||||+++||++|+.||..... .+.+....... ...
T Consensus 156 ~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~-~~~-- 220 (256)
T cd08218 156 ELA----RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--------KNLVLKIIRGS-YPP-- 220 (256)
T ss_pred hhh----hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------HHHHHHHhcCC-CCC--
Confidence 111 122378889999999988899999999999999999999999864221 12221111110 000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....... .+..++..|+. .+|.+||++.||++
T Consensus 221 ----~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~vl~ 252 (256)
T cd08218 221 ----VSSHYSY---DLRNLVSQLFK-RNPRDRPSVNSILE 252 (256)
T ss_pred ----CcccCCH---HHHHHHHHHhh-CChhhCcCHHHHhh
Confidence 0011122 34445556776 88999999999986
No 233
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.6e-34 Score=294.87 Aligned_cols=198 Identities=25% Similarity=0.332 Sum_probs=162.8
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCC---CCCCCcceeEEEEeC-----C
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSV---KNRNLVPLLGFCMAK-----K 373 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~-----~ 373 (623)
+|...+.||+|+||.||+|... +++.||+|.++... .....+.+|++++.++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4777899999999999999865 68899999886432 1233455677666554 799999999988653 3
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++|+||+++ +|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 46899999985 8988886432 24589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++....... .....+|..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 155 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 155 ARIYSCQMA-----LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred cccccCccc-----CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 987643211 11234788999999999888999999999999999999999998654
No 234
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.9e-34 Score=285.85 Aligned_cols=249 Identities=29% Similarity=0.466 Sum_probs=194.1
Q ss_pred cccceeeccCccEEEEEEeCC-----CcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 308 SKNNIIGSGRTGTMYKALLED-----GTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
+..+.||+|+||.||++...+ +..|++|.+..... ..+.+..|++.+..++|+|++++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456889999999999999754 47899999976543 46788999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||||+||++++++.++|+|||+++.....
T Consensus 82 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 82 YMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred ccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999999964321 2289999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
...... ...+++.|+|||.+.+..++.++||||+|++++||++ |+.||..... ............. .
T Consensus 157 ~~~~~~---~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~-~ 224 (258)
T smart00219 157 DYYKKK---GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGYRL-P 224 (258)
T ss_pred cccccc---cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCCCC-C
Confidence 221111 1236789999999988889999999999999999998 7777764211 1111111111000 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.....+. .+.+++..|+. .+|++|||+.|+++.|
T Consensus 225 ------~~~~~~~---~~~~~i~~~l~-~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 ------KPENCPP---EIYKLMLQCWA-EDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCCcCCH---HHHHHHHHHCc-CChhhCcCHHHHHhhC
Confidence 0011223 34445567777 9999999999998764
No 235
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.7e-34 Score=301.09 Aligned_cols=196 Identities=28% Similarity=0.359 Sum_probs=166.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------ 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 373 (623)
.++|...+.||+|+||.||++... ++..||+|++... ......+.+|+.++..++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 467899999999999999999864 6889999998653 233456789999999999999999999986543
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++||||+++ +|.+.++ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46899999975 6666663 2478888999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 170 a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 170 ARTACTNF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccccccCc-----cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 97643211 112234789999999999999999999999999999999999999764
No 236
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.6e-34 Score=301.77 Aligned_cols=197 Identities=23% Similarity=0.313 Sum_probs=167.2
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------C
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------K 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 373 (623)
.++|...+.||+|+||.||++... .++.||+|++.... .....+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467899999999999999999954 68889999986532 3345678899999999999999999987543 3
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred eEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 46899999975 7777763 3478889999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 173 a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 173 ARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred ccccCCCC-----cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 98654321 1122357899999999999999999999999999999999999997543
No 237
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.2e-35 Score=294.38 Aligned_cols=255 Identities=25% Similarity=0.381 Sum_probs=196.0
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCC------e
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKK------E 374 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~ 374 (623)
++++|...+.||+|++|.||+|... ++..+++|.+.......+.+.+|++++.++ .|+|++++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 4678999999999999999999975 578899999877666667899999999999 7999999999997654 4
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++|+||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccc
Confidence 7899999999999999865432346789999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHH
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
......... .....++..|+|||++.. ..++.++||||||+++|||++|+.||....... .. .
T Consensus 161 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~----~ 228 (275)
T cd06608 161 AQLDSTLGR----RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR----AL----F 228 (275)
T ss_pred eecccchhh----hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH----HH----H
Confidence 765432211 122347889999998753 346789999999999999999999996432110 01 1
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..... ....+. ......++ +.++..+|+. .||++|||+.|+++
T Consensus 229 ~~~~~-~~~~~~----~~~~~~~~---~~~li~~~l~-~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRN-PPPTLK----SPENWSKK---FNDFISECLI-KNYEQRPFMEELLE 271 (275)
T ss_pred Hhhcc-CCCCCC----chhhcCHH---HHHHHHHHhh-cChhhCcCHHHHhc
Confidence 11110 000000 00011223 3345556776 89999999999975
No 238
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.7e-34 Score=290.86 Aligned_cols=259 Identities=22% Similarity=0.287 Sum_probs=195.8
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e 380 (623)
+|...+.||.|++|.||++... +++.+++|.+.... .....+.+|++++++++||||+++++++.+. ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5777899999999999999974 57889999886543 2456788999999999999999999998654 35789999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++.........+++.....++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999998754333345688899999999999999999999 9999999999999999999999999998765321
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... ...++..|+|||.+.+..++.++||||+|+++|||++|+.||.....+.........++... ....+
T Consensus 159 ~~~------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~ 228 (287)
T cd06621 159 LAG------TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----PNPEL 228 (287)
T ss_pred ccc------cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC----Cchhh
Confidence 111 12367889999999988899999999999999999999999976433111111122222110 00000
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....... ..-...+.+++..|+. .+|++|||+.|+++
T Consensus 229 -~~~~~~~--~~~~~~~~~li~~~l~-~~p~~Rpt~~eil~ 265 (287)
T cd06621 229 -KDEPGNG--IKWSEEFKDFIKQCLE-KDPTRRPTPWDMLE 265 (287)
T ss_pred -ccCCCCC--CchHHHHHHHHHHHcC-CCcccCCCHHHHHh
Confidence 0000000 0112234566677876 89999999999987
No 239
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=305.20 Aligned_cols=245 Identities=25% Similarity=0.413 Sum_probs=197.4
Q ss_pred cceeeccCccEEEEEEeC--CC--cEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 310 NNIIGSGRTGTMYKALLE--DG--TSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++||+|.||.|++|.|. .| ..||||.++.... ....|.+|+.+|.+++|||+++++|+..+ ....+|+|.++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 568999999999999975 34 3589999987543 56789999999999999999999999987 67889999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
.|+|.+.|++. ....|-......++.|||.||.||.++ ++|||||.++|+|+-....+||+|||+.+-+...+.+
T Consensus 194 lGSLldrLrka--~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 194 LGSLLDRLRKA--KKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cchHHHHHhhc--cccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 99999999872 335677888899999999999999999 9999999999999999999999999999988765544
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. .+.....-.+.|.|||.+....++.++|||+|||.+|||+| |..||.+.... .+.+.+|
T Consensus 269 Y-vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------------------qIL~~iD 329 (1039)
T KOG0199|consen 269 Y-VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------------------QILKNID 329 (1039)
T ss_pred e-EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------------------HHHHhcc
Confidence 3 22222334678999999999999999999999999999998 88888753321 1112222
Q ss_pred hh--h-hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 543 KC--L-VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 543 ~~--l-~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.. | +...+.+ ++-+++..|+. .+|++|||+..+.+.+
T Consensus 330 ~~erLpRPk~cse---dIY~imk~cWa-h~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 AGERLPRPKYCSE---DIYQIMKNCWA-HNPADRPTFSAIREDL 369 (1039)
T ss_pred ccccCCCCCCChH---HHHHHHHHhcc-CCccccccHHHHHHhH
Confidence 11 1 1223444 45555667887 9999999999998544
No 240
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2e-34 Score=299.94 Aligned_cols=200 Identities=23% Similarity=0.254 Sum_probs=164.4
Q ss_pred cceeecc--CccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 310 NNIIGSG--RTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 310 ~~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.++||+| +|++||++.. .+|..||+|++.... .....+.+|+++++.++||||+++++++..++..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4689999 6789999985 578999999997542 233467789999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+...........
T Consensus 83 ~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 83 YGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999985432 23589999999999999999999999 9999999999999999999999999876543211110
Q ss_pred c---cccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 464 L---STFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 464 ~---~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. ........++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 0 001112246778999999875 45889999999999999999999999753
No 241
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-34 Score=290.28 Aligned_cols=239 Identities=21% Similarity=0.351 Sum_probs=181.5
Q ss_pred ceeeccCccEEEEEEeCC--------CcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALLED--------GTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+.||+|+||.||+|.... ..++++|.+.... ...+.+.+|+.++..+.|||++++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998642 2347788775443 3345788899999999999999999999998999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC--------eEEeeccc
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE--------PKISDFGL 453 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~--------~kl~Dfgl 453 (623)
+++|+|.++++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++. ++++|||+
T Consensus 81 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 99999999996432 3689999999999999999999999 9999999999999987765 58999998
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCC-CCCCCCCCcccccccHHHHHHHH
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGE-RPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~-~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
+....... ...++..|+|||++.+ ..++.++||||||+++|||++|. .|+...... ......
T Consensus 155 ~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~~~~~ 218 (258)
T cd05078 155 SITVLPKE--------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KKLQFY 218 (258)
T ss_pred ccccCCch--------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HHHHHH
Confidence 87543311 1236788999999976 45789999999999999999995 444321110 000000
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
..... .......++.+++..|+. .+|++|||++++++.|+
T Consensus 219 ~~~~~------------~~~~~~~~~~~li~~~l~-~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 219 EDRHQ------------LPAPKWTELANLINQCMD-YEPDFRPSFRAIIRDLN 258 (258)
T ss_pred Hcccc------------CCCCCcHHHHHHHHHHhc-cChhhCCCHHHHHHhcC
Confidence 00000 001111234555666777 99999999999998863
No 242
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9.3e-34 Score=285.13 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=195.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|+||.||+|... ++..|++|.+..... ..+.+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4677899999999999999864 688999999876543 456789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++.. +..+++..+..++.+++.|+.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999963 24578899999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLV---ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
...........++..|+|||++.... ++.++||||||+++||+++|+.||...... ......... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-------~~~~~~~~~-~~-- 223 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-------FQIMFHVGA-GH-- 223 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-------HHHHHHHhc-CC--
Confidence 32222122345788999999998766 889999999999999999999999643211 000000000 00
Q ss_pred hhhchhhhcC-CCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAK-GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~-~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+.+... .....+ ..+...|+. .+|.+||++.|++.
T Consensus 224 ---~~~~~~~~~~~~~~---~~li~~~l~-~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 ---KPPIPDSLQLSPEG---KDFLDRCLE-SDPKKRPTASELLQ 260 (264)
T ss_pred ---CCCCCcccccCHHH---HHHHHHHcc-CCcccCCCHHHHhc
Confidence 0000000 112233 345557776 89999999999864
No 243
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.3e-34 Score=302.31 Aligned_cols=203 Identities=21% Similarity=0.293 Sum_probs=173.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|+..+.||+|+||.||++... ++..||+|++.... .....+..|++++.+++|||++++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788899999999999999965 68899999986432 23456788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||+++.+..
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999863 34588999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCc-------------------------------ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCC
Q 006982 460 IDTH-------------------------------LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGE 508 (623)
Q Consensus 460 ~~~~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~ 508 (623)
.... .........||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 1100 000011235899999999999999999999999999999999999
Q ss_pred CCCCCC
Q 006982 509 RPTNVA 514 (623)
Q Consensus 509 ~P~~~~ 514 (623)
.||...
T Consensus 234 ~Pf~~~ 239 (360)
T cd05627 234 PPFCSE 239 (360)
T ss_pred CCCCCC
Confidence 999754
No 244
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-33 Score=293.14 Aligned_cols=199 Identities=22% Similarity=0.323 Sum_probs=160.8
Q ss_pred cceeeccCccEEEEEEeC---CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCeeeEEEecCCC
Q 006982 310 NNIIGSGRTGTMYKALLE---DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKERLLVYKHMPN 384 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~ 384 (623)
..+||+|+||.||+|... +++.+|+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 468999999999999864 46789999986543 23457789999999999999999998865 3457899999864
Q ss_pred CCHhhhccCCC-----CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee----CCCCCeEEeeccccc
Q 006982 385 GSLYDLLHPAD-----DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL----DDDFEPKISDFGLAR 455 (623)
Q Consensus 385 gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl----~~~~~~kl~Dfgla~ 455 (623)
+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 8888764321 1123588999999999999999999999 99999999999999 466789999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
......... .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 161 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 161 LFNSPLKPL-ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCCccc-cccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 764322111 11223458999999999876 45889999999999999999999999753
No 245
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.6e-34 Score=287.03 Aligned_cols=250 Identities=22% Similarity=0.282 Sum_probs=190.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||+|... +++.|++|.++... .....+.+|+.++..++|||++++++++...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 45777889999999999999854 68899999886543 23356788999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ...+++.+.+.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 89 GGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 99999999853 24688999999999999999999999 999999999999999999999999999876543211
Q ss_pred cccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
. .....|+..|+|||++. ...++.++|||||||++|||++|..||....... .. .........
T Consensus 162 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~~----~~~~~~~~~-- 227 (267)
T cd06645 162 K----RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----AL----FLMTKSNFQ-- 227 (267)
T ss_pred c----cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh----hH----HhhhccCCC--
Confidence 1 12234789999999874 4557899999999999999999999986432211 00 000000000
Q ss_pred hhchhhhc-CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~-~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+.+.. ...++. +.+++..|+. .+|++||+++++++
T Consensus 228 --~~~~~~~~~~~~~---~~~li~~~l~-~~P~~R~~~~~ll~ 264 (267)
T cd06645 228 --PPKLKDKMKWSNS---FHHFVKMALT-KNPKKRPTAEKLLQ 264 (267)
T ss_pred --CCcccccCCCCHH---HHHHHHHHcc-CCchhCcCHHHHhc
Confidence 000000 011223 3344555665 89999999999875
No 246
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5e-34 Score=293.37 Aligned_cols=200 Identities=22% Similarity=0.347 Sum_probs=168.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|+||.||+|... ++..||+|.+... ......+.+|++++.+++||||+++++++...+..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888899999999999999865 6789999998643 23345678899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+|+||||+||++++++.++|+|||++.......
T Consensus 86 ~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 97 5999888543 24578999999999999999999999 99999999999999999999999999997643221
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
.. .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ~~----~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 159 KT----YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred Cc----ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11 122346889999998765 457889999999999999999999997543
No 247
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-34 Score=324.46 Aligned_cols=262 Identities=21% Similarity=0.329 Sum_probs=194.8
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Ceee
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERL 376 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 376 (623)
..++|.+.+.||+|+||.||++... ++..+++|.+.... .....+..|+.++.+++|||||++++++... ...+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3467899999999999999999965 56788899886432 3346788999999999999999999988653 4678
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCC----CCcEecCCCCCceeeCC----------
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCN----PRIIHRNISSKCILLDD---------- 442 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~----~~i~H~dlk~~NILl~~---------- 442 (623)
+||||+++|+|.++|.........+++..++.|+.||+.||+|||+... .+|+||||||+||||+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999999999996543334579999999999999999999998521 25999999999999964
Q ss_pred -------CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 443 -------DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 443 -------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
...+||+|||++..+..... .....||+.|+|||++.. ..++.++||||||||+|||++|+.||..
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~-----~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESM-----AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccCCCCceEEccCCcccccccccc-----ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 33589999999986543211 122358999999999854 4578999999999999999999999964
Q ss_pred CCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH--HHHHhhc
Q 006982 514 AKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ--FLRAIGE 588 (623)
Q Consensus 514 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~--~L~~i~~ 588 (623)
... ....+....... .+.......++.. ++..|+. .+|.+||++.|++. .+..+..
T Consensus 246 ~~~-------~~qli~~lk~~p--------~lpi~~~S~eL~d---LI~~~L~-~dPeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 246 ANN-------FSQLISELKRGP--------DLPIKGKSKELNI---LIKNLLN-LSAKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred CCc-------HHHHHHHHhcCC--------CCCcCCCCHHHHH---HHHHHhc-CChhHCcCHHHHhccHHHhhcCC
Confidence 322 112222111110 0111112334444 4445655 89999999999984 4554433
No 248
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.2e-34 Score=286.74 Aligned_cols=254 Identities=24% Similarity=0.362 Sum_probs=194.1
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
+|+..+.||+|++|.||++.. .++..+++|.+.... ...+.+.+|++++++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999984 578999999986432 124578899999999999999999999999999999
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeecccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARL 456 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgla~~ 456 (623)
|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999863 24688999999999999999999999 999999999999998776 599999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
................++..|+|||.+.+..++.++||||+|+++|||++|+.||...... ..............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 228 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS-----NHLALIFKIASATT 228 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc-----chHHHHHHHhccCC
Confidence 6543222111122234788999999998888899999999999999999999999643221 11111111000000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
........-..+..++..|+. .+|++||++.|+++
T Consensus 229 ---------~~~~~~~~~~~~~~~i~~~l~-~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 ---------APSIPEHLSPGLRDVTLRCLE-LQPEDRPPSRELLK 263 (268)
T ss_pred ---------CCCCchhhCHHHHHHHHHHcC-CCcccCcCHHHHhc
Confidence 000011111234455566776 99999999999874
No 249
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.6e-34 Score=301.59 Aligned_cols=197 Identities=23% Similarity=0.307 Sum_probs=166.9
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------ 372 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 372 (623)
..++|...+.||+|+||.||++... .+..||+|++.... .....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3468999999999999999999854 68899999987532 2345677899999999999999999988643
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
...++||||+++ ++.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 246899999975 6777663 3478889999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 165 LARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred ccccCCCcc-----ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 998654321 112235789999999999888999999999999999999999999754
No 250
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-33 Score=290.00 Aligned_cols=198 Identities=23% Similarity=0.317 Sum_probs=168.1
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
+|...+.||+|++|.||+|... +++.|++|.+..... ....+..|++++.+++|+|++++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3677789999999999999964 689999999975432 234567899999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+ +|+|.+++.... ..+++..++.++.|+++||.|||+. +++|+||||+||+++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 999999996432 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
...... ....++..|+|||.+.+ ..++.++|||||||++|||++|..||...
T Consensus 154 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~ 206 (298)
T cd07841 154 SPNRKM----THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGD 206 (298)
T ss_pred CCCccc----cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCC
Confidence 432111 12235788999998854 45789999999999999999998777643
No 251
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-33 Score=285.46 Aligned_cols=249 Identities=23% Similarity=0.360 Sum_probs=190.8
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCee
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 375 (623)
|.....||+|++|.||+|... ++..+++|.+..... ..+.+.+|++++.+++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 666789999999999999864 678999998864321 124578899999999999999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++
T Consensus 82 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred EEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999953 24588899999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcc--cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 456 LMNPIDTHL--STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 456 ~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
......... ........++..|+|||.+.+..++.++||||||+++|||++|+.||...... .. +....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~-~~~~~- 225 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-------QA-IFKIG- 225 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-------HH-HHHHh-
Confidence 764311110 00111223788999999999888899999999999999999999999753211 00 00000
Q ss_pred cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 534 TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 534 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....+.+.. ...+++.. +...|+. .+|.+||++.|+++
T Consensus 226 -----~~~~~~~~~-~~~~~~~~---li~~~l~-~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 -----ENASPEIPS-NISSEAID---FLEKTFE-IDHNKRPTAAELLK 263 (267)
T ss_pred -----ccCCCcCCc-ccCHHHHH---HHHHHcc-CCchhCcCHHHHhh
Confidence 000111111 12333333 3345665 89999999999875
No 252
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.4e-34 Score=290.19 Aligned_cols=252 Identities=21% Similarity=0.376 Sum_probs=191.6
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|+..+.||+|+||.||++... ++..|++|.+... ......+.+|++++.+++||||+++++++...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5777899999999999999975 7899999988643 223457889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.... ....+++..+..++.+++.||.|||+++ +|+|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 82 DAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred CCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 9999999986432 1246899999999999999999999743 899999999999999999999999999976532211
Q ss_pred cccccccCCCCcccccCcccccCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTL------VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~------~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
....++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ........... ..
T Consensus 159 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~-~~ 226 (286)
T cd06622 159 ------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLSAIVD-GD 226 (286)
T ss_pred ------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHHHHhh-cC
Confidence 123477899999998544 3478999999999999999999999643211 11111111000 00
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
. +.+.. ..++++ ..++.+|+. .+|++||++++++..
T Consensus 227 ~-----~~~~~-~~~~~~---~~li~~~l~-~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 227 P-----PTLPS-GYSDDA---QDFVAKCLN-KIPNRRPTYAQLLEH 262 (286)
T ss_pred C-----CCCCc-ccCHHH---HHHHHHHcc-cCcccCCCHHHHhcC
Confidence 0 00001 122333 344456766 899999999998863
No 253
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-33 Score=288.20 Aligned_cols=249 Identities=20% Similarity=0.286 Sum_probs=189.8
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
|+..+.||+|+||.||++... ++..+++|.+.... .....+.+|+++++.++|||++++++++...+..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 456788999999999999965 47788888886543 3456788999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|..++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 87 ~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~- 159 (282)
T cd06643 87 GAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR- 159 (282)
T ss_pred CcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccccc-
Confidence 9999987532 24689999999999999999999999 9999999999999999999999999999765322111
Q ss_pred cccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 465 STFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.....++..|+|||++. ...++.++|||||||++|||++|+.||...... +........... .
T Consensus 160 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~~-~ 227 (282)
T cd06643 160 ---RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEPP-T 227 (282)
T ss_pred ---cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--------HHHHHHhhcCCC-C
Confidence 12234789999999984 345778999999999999999999998643211 111111111000 0
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. .....+.++ .+++..|+. .+|.+||++.++++.
T Consensus 228 ~~----~~~~~~~~~---~~li~~~l~-~~p~~Rp~~~~il~~ 262 (282)
T cd06643 228 LA----QPSRWSSEF---KDFLKKCLE-KNVDARWTTTQLLQH 262 (282)
T ss_pred CC----CccccCHHH---HHHHHHHcc-CChhhCcCHHHHhcC
Confidence 00 011123333 344456776 899999999988643
No 254
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=9.5e-34 Score=293.38 Aligned_cols=204 Identities=24% Similarity=0.320 Sum_probs=173.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
+|...+.||+|++|.||++... ++..+++|.+..... ..+.+..|++++.+++||||+++++++......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5788899999999999999976 489999999865432 34568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++... .+..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 82 YCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred ecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 99999999998643 235689999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCccc-------------------------ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLS-------------------------TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... ...+...|+..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 11100 0111235788999999999888999999999999999999999999753
No 255
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.2e-34 Score=291.44 Aligned_cols=199 Identities=25% Similarity=0.352 Sum_probs=169.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|+..+.||+|+||.||+|..+ +++.|++|++.... ...+.+.+|++++..++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35778899999999999999976 58899999886532 234568899999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.++... ...++|..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999999887742 23489999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 154 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 204 (286)
T cd07846 154 GEV----YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204 (286)
T ss_pred ccc----cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCC
Confidence 211 122347889999999865 45688999999999999999999998653
No 256
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-34 Score=285.55 Aligned_cols=209 Identities=24% Similarity=0.277 Sum_probs=176.8
Q ss_pred cCcccceeeccCccEEEEEEeCC-CcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.|...+.||.|.-|+||.+...+ +...|+|++.+.. ....+...|-++|..+.||.++.+++.++.+...++|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45567889999999999999775 5889999997653 334567789999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC-
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP- 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~- 459 (623)
||+||+|..+++... +..+++..+..++.++..||+|||-. |||.|||||+||||-++|++.|+||.++.....
T Consensus 158 yCpGGdL~~LrqkQp--~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP--GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred cCCCccHHHHHhhCC--CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999998654 47899999999999999999999999 999999999999999999999999998864311
Q ss_pred ------CC--------------------------Cc-------------------ccccccCCCCcccccCcccccCCCC
Q 006982 460 ------ID--------------------------TH-------------------LSTFVNGEFGDLGYVAPEYARTLVA 488 (623)
Q Consensus 460 ------~~--------------------------~~-------------------~~~~~~~~~gt~~y~aPE~~~~~~~ 488 (623)
.. .. .....+.-+||-.|+|||++.+..-
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 00 0001112358999999999999999
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCCCCCCccc
Q 006982 489 TPKGDVYSFGTVLLELVTGERPTNVAKAPET 519 (623)
Q Consensus 489 s~k~DV~sfGvil~elltg~~P~~~~~~~~~ 519 (623)
+.++|.|+|||++|||+.|+.||.+....+.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T 343 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET 343 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh
Confidence 9999999999999999999999988655433
No 257
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.7e-33 Score=282.83 Aligned_cols=252 Identities=23% Similarity=0.310 Sum_probs=195.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||++... +++.+++|.+.... ...+.+.+|++++++++|||++++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46888899999999999999964 57889999986543 34567899999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++... ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 83 ~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 83 GGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred CCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 999999998643 24688999999999999999999998 999999999999999999999999999986543211
Q ss_pred cccccccCCCCcccccCcccccCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTL---VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~---~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
. .....++..|+|||.+... .++.++||||||+++|||++|+.||........ . ...... ..
T Consensus 157 ~----~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~----~----~~~~~~-~~-- 221 (262)
T cd06613 157 K----RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA----L----FLISKS-NF-- 221 (262)
T ss_pred c----cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH----H----HHHHhc-cC--
Confidence 1 1123477889999999776 789999999999999999999999975322110 0 000000 00
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....+. ........+.+++.+|+. .+|.+|||+.+|+.
T Consensus 222 -~~~~~~--~~~~~~~~~~~li~~~l~-~~p~~Rpt~~~il~ 259 (262)
T cd06613 222 -PPPKLK--DKEKWSPVFHDFIKKCLT-KDPKKRPTATKLLQ 259 (262)
T ss_pred -CCcccc--chhhhhHHHHHHHHHHcC-CChhhCCCHHHHhc
Confidence 000000 011112234555667776 89999999999875
No 258
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-33 Score=284.97 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=168.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Cee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 375 (623)
.+|...+.||+|+||.||+|... ++..|++|.+.... ...+.+.+|++++.+++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999964 58899999875321 1235678899999999999999999988764 456
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++++|.+++... ..+++...++++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 7999999999999998532 3478888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.......... ......++..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 155 RLQTICLSGT-GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred cccccccccc-ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 6543211111 11223478899999999888889999999999999999999999864
No 259
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2e-33 Score=290.96 Aligned_cols=199 Identities=22% Similarity=0.325 Sum_probs=160.2
Q ss_pred cceeeccCccEEEEEEeC---CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEe--CCeeeEEEecCCC
Q 006982 310 NNIIGSGRTGTMYKALLE---DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMA--KKERLLVYKHMPN 384 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~ 384 (623)
..+||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 368999999999999965 35689999886543 23467789999999999999999998854 4567899999875
Q ss_pred CCHhhhccCCC-----CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee----CCCCCeEEeeccccc
Q 006982 385 GSLYDLLHPAD-----DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL----DDDFEPKISDFGLAR 455 (623)
Q Consensus 385 gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl----~~~~~~kl~Dfgla~ 455 (623)
+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 7777764221 1224588999999999999999999999 99999999999999 567799999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
......... .......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPL-ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccc-cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 764322111 11223457899999999876 45789999999999999999999999753
No 260
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.1e-33 Score=287.46 Aligned_cols=250 Identities=19% Similarity=0.300 Sum_probs=191.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+.|.+.+.||+|+||.||+|... ++..+++|.+.... ...+.+.+|++++++++|||++++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45778899999999999999975 58899999986543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|..++... ...+++..+..++.|++.++.|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 92 ~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 92 PGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred CCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 999999887532 24589999999999999999999998 999999999999999999999999999875432111
Q ss_pred cccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
. .....+++.|+|||++. ...++.++|||||||++|||++|+.||...... ...........
T Consensus 166 ~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~- 232 (292)
T cd06644 166 R----RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSEP- 232 (292)
T ss_pred c----cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--------HHHHHHhcCCC-
Confidence 1 11233778999999984 345688999999999999999999998643211 11111111100
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.... .......+ +..+...|+. .+|++||++.|+++
T Consensus 233 ~~~~----~~~~~~~~---~~~li~~~l~-~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 PTLS----QPSKWSME---FRDFLKTALD-KHPETRPSAAQLLE 268 (292)
T ss_pred ccCC----CCcccCHH---HHHHHHHHhc-CCcccCcCHHHHhc
Confidence 0000 00111223 3444556666 89999999999875
No 261
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=296.31 Aligned_cols=254 Identities=22% Similarity=0.395 Sum_probs=200.6
Q ss_pred cCcccceeeccCccEEEEEEeCC---Cc--EEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED---GT--SLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~---~~--~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.....++||.|-||.||+|.+.+ |. .||||.-+.. ....+.|..|..+|++++||||++++|+|.+ ...|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEE
Confidence 34456789999999999998532 33 4888887763 3456789999999999999999999999976 468999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
||.++-|.|.++|+... ..++......++.|+..+|+|||+. .++||||.++|||+....-+|++|||+++.+.
T Consensus 469 mEL~~~GELr~yLq~nk---~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNK---DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EecccchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 99999999999997543 4688889999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
....+..... .-+..|||||.+.-.+++.++|||-|||.+||++. |..||.+-...+.... +..++-
T Consensus 543 d~~yYkaS~~---kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~---------iEnGeR 610 (974)
T KOG4257|consen 543 DDAYYKASRG---KLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH---------IENGER 610 (974)
T ss_pred ccchhhcccc---ccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE---------ecCCCC
Confidence 6555443321 24678999999999999999999999999999997 9999986443321100 000100
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.. ....++..+. .+.-.|+. .+|.+||++.|+...|.++.+
T Consensus 611 lP------~P~nCPp~LY---slmskcWa-yeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 LP------CPPNCPPALY---SLMSKCWA-YEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CC------CCCCCChHHH---HHHHHHhc-cCcccCCcHHHHHHHHHHHHH
Confidence 00 1112333333 44456766 999999999999999998876
No 262
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8.1e-34 Score=295.82 Aligned_cols=201 Identities=21% Similarity=0.234 Sum_probs=171.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|+||.||+++.. ++..||+|.+.... .....+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999965 67889999986532 22345788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999642 24688899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .....||++|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 155 DGTVQ---SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CCcee---eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 22211 112348999999999875 46788999999999999999999999753
No 263
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.1e-34 Score=311.10 Aligned_cols=201 Identities=16% Similarity=0.231 Sum_probs=162.0
Q ss_pred HHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCC------CCCcceeEEEEeC-
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN------RNLVPLLGFCMAK- 372 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~~~- 372 (623)
...+++|.+.+.||+|+||.||+|... .+..||||+++........+..|++++..++| .+++++++++...
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 345678999999999999999999864 57889999997543334445556666655544 5688888888765
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC--------
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-------- 444 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-------- 444 (623)
...++|+|++ +++|.+++.. ...+++..+..|+.|++.||.|||+++ +|+||||||+|||++.++
T Consensus 205 ~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 205 GHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred ceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEecCCcccccccc
Confidence 4678899988 7789988853 246899999999999999999999732 899999999999998765
Q ss_pred --------CeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 445 --------EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 445 --------~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
.+||+|||.+....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~~~-------~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERHSR-------TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred cccCCCCceEEECCCCccccCcccc-------ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999886432211 12348999999999999999999999999999999999999997643
No 264
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.5e-33 Score=282.24 Aligned_cols=247 Identities=19% Similarity=0.336 Sum_probs=192.9
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|++|.||++... ++..+++|.+.... .....+.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4777899999999999999854 68889999886432 3356788999999999999999999999988999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Dfgla~~~~~~ 460 (623)
+++++|.+++.... +..+++..+..++.+++.+++|||+. +++|+||+|+||+++++ +.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999999996432 34589999999999999999999999 99999999999999854 46899999999876432
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ......... ....+
T Consensus 156 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~ 221 (256)
T cd08220 156 SKA-----YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--------ALVLKIMSG-TFAPI 221 (256)
T ss_pred ccc-----cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--------HHHHHHHhc-CCCCC
Confidence 211 1234788999999999888899999999999999999999998653221 111111110 00000
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .....+ +.++...|+. .+|++|||+.|++.
T Consensus 222 ~------~~~~~~---l~~li~~~l~-~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 S------DRYSPD---LRQLILSMLN-LDPSKRPQLSQIMA 252 (256)
T ss_pred C------CCcCHH---HHHHHHHHcc-CChhhCCCHHHHhh
Confidence 0 112223 4455566776 89999999999975
No 265
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.5e-33 Score=282.54 Aligned_cols=246 Identities=26% Similarity=0.393 Sum_probs=192.3
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
+|...+.||+|++|.||+|... ++..|++|.+.... ...+.+.+|++++++++|+|++++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999976 78999999885432 2346788999999999999999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++++|.+++.. ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999853 24588999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcccccccCCCCcccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLV-ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
... ......++..|+|||.+.... ++.++|+||||+++|||++|+.||..... .............
T Consensus 154 ~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~ 220 (258)
T cd06632 154 EFS-----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--------VAAVFKIGRSKEL 220 (258)
T ss_pred ccc-----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--------HHHHHHHHhcccC
Confidence 322 112234788999999987766 89999999999999999999999965321 1111111110011
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..+ .....+++.+ +..+|+. .+|.+||++.+++.
T Consensus 221 ~~~------~~~~~~~~~~---li~~~l~-~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 PPI------PDHLSDEAKD---FILKCLQ-RDPSLRPTAAELLE 254 (258)
T ss_pred CCc------CCCcCHHHHH---HHHHHhh-cCcccCcCHHHHhc
Confidence 000 1112333333 3445665 88999999999875
No 266
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=276.88 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=194.6
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecc---ccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQD---SQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++.|+.-++||+|.|+.||+..+ .+|+.+++|++.. ...+.+++.+|+++-+.++|||||++.....+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 34677778999999999999874 5788888888754 3346778899999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC---CCCCeEEeecccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFGLARL 456 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~---~~~~~kl~Dfgla~~ 456 (623)
|+|.||+|..-+- ....+++..+-....||.++|.|.|.+ +|+|||+||+|+++. ...-+|++|||+|..
T Consensus 90 e~m~G~dl~~eIV----~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIV----AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999977652 225578888899999999999999999 999999999999994 445689999999998
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
+.. .....+..|||+|||||++...+|+..+|||+.|||||-++.|+.||.+.+... +.+.+.+...
T Consensus 163 l~~-----g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-----lye~I~~g~y--- 229 (355)
T KOG0033|consen 163 VND-----GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-----LYEQIKAGAY--- 229 (355)
T ss_pred eCC-----ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-----HHHHHhcccc---
Confidence 863 223456779999999999999999999999999999999999999998633221 1111111000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
++-.+. .+...++...+++..+. .||++|.|+.|.++
T Consensus 230 --d~~~~~--w~~is~~Ak~LvrrML~----~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 230 --DYPSPE--WDTVTPEAKSLIRRMLT----VNPKKRITADEALK 266 (355)
T ss_pred --CCCCcc--cCcCCHHHHHHHHHHhc----cChhhhccHHHHhC
Confidence 000111 12345566666655444 77888888877543
No 267
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.7e-34 Score=285.71 Aligned_cols=259 Identities=24% Similarity=0.350 Sum_probs=197.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|+..+.||.|+||.||+|... ++..+++|++.... ...+.+.+|++.++.++|+|++++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 36888899999999999999954 67889999986543 3456789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++..... ...+++.....++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999964322 24689999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
...........++..|+|||++... .++.++|||||||++|||++|+.||....... ...+.... ... .
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----~~~~~~~~---~~~---~ 226 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK----VLMLTLQN---DPP---S 226 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh----hHHHHhcC---CCC---C
Confidence 2211111223478899999998776 78999999999999999999999997543211 11111110 000 0
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
...........+ .+..++..|+. .+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~ll~ 263 (267)
T cd06610 227 LETGADYKKYSK---SFRKMISLCLQ-KDPSKRPTAEELLK 263 (267)
T ss_pred cCCccccccccH---HHHHHHHHHcC-CChhhCcCHHHHhh
Confidence 000000001122 34455556776 89999999999875
No 268
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-33 Score=287.25 Aligned_cols=250 Identities=21% Similarity=0.320 Sum_probs=192.9
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|.+.+.||+|+||.||++... ++..+++|...... ...+.+..|++++++++|||++++++++..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 46788889999999999999964 68899999986543 34467889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++... +..+++..+..++.|++.|+.|||+. +|+|+||||+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 85 DGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred CCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 999999998532 24689999999999999999999999 999999999999999999999999999876533221
Q ss_pred cccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
.. ....+++.|+|||++. ...++.++||||||+++|||++|+.||...... +..........
T Consensus 159 ~~----~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~- 225 (280)
T cd06611 159 KR----DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--------RVLLKILKSEP- 225 (280)
T ss_pred cc----ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--------HHHHHHhcCCC-
Confidence 11 1234788999999874 345678999999999999999999999653211 11111111000
Q ss_pred hhhhchhh-hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 538 QDAIDKCL-VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 538 ~~~~d~~l-~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.+ .......++.+ +...|+. .+|.+||++.+|++.
T Consensus 226 -----~~~~~~~~~~~~~~~---li~~~l~-~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 -----PTLDQPSKWSSSFND---FLKSCLV-KDPDDRPTAAELLKH 262 (280)
T ss_pred -----CCcCCcccCCHHHHH---HHHHHhc-cChhhCcCHHHHhcC
Confidence 000 01112333443 4445665 899999999999764
No 269
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.5e-33 Score=284.53 Aligned_cols=246 Identities=22% Similarity=0.365 Sum_probs=192.8
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
-|...+.||+|+||.||+|... ++..+|+|.+.... .....+.+|++.+.+++|||++++++++..+...++|+||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3666789999999999999864 68899999876432 23457889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++.....++.+++.++.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 85 GGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence 99999999852 4588999999999999999999998 999999999999999999999999999976543221
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
. .....++..|+|||++.+..++.++|||||||++|||++|..||..... ..+..... ....
T Consensus 157 ~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~----- 218 (277)
T cd06641 157 K----RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--------MKVLFLIP-KNNP----- 218 (277)
T ss_pred h----hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--------HHHHHHHh-cCCC-----
Confidence 1 1123478889999999888889999999999999999999999864221 11111110 0000
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.+. ...+.+ +..++..|+. .+|.+||++.+++..
T Consensus 219 ~~~~-~~~~~~---~~~~i~~~l~-~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 PTLE-GNYSKP---LKEFVEACLN-KEPSFRPTAKELLKH 253 (277)
T ss_pred CCCC-cccCHH---HHHHHHHHcc-CChhhCcCHHHHHhC
Confidence 0000 112233 3344556766 889999999999984
No 270
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.4e-33 Score=287.10 Aligned_cols=252 Identities=24% Similarity=0.347 Sum_probs=187.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHH-hCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMAT-LGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|+..+.||+|+||.||++... +|..||+|+++... .....+..|+.. ++...|||++++++++..+...++|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36788899999999999999965 68999999987543 233455566665 666789999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|++ |+|.+++.........+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 6888887543333467899999999999999999999853 7999999999999999999999999999865321
Q ss_pred CCcccccccCCCCcccccCcccccC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
.. .....++..|+|||.+.+ ..++.++|+||||+++|||++|+.||...... ... .......
T Consensus 158 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~-~~~~~~~-- 223 (283)
T cd06617 158 VA-----KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP------FQQ-LKQVVEE-- 223 (283)
T ss_pred cc-----cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC------HHH-HHHHHhc--
Confidence 11 112347889999998864 45688999999999999999999998642211 111 1110000
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..+.+.....++++. .++..|+. .+|++||++.++++
T Consensus 224 ----~~~~~~~~~~~~~l~---~li~~~l~-~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 ----PSPQLPAEKFSPEFQ---DFVNKCLK-KNYKERPNYPELLQ 260 (283)
T ss_pred ----CCCCCCccccCHHHH---HHHHHHcc-CChhhCcCHHHHhc
Confidence 000111111233333 44445666 89999999999976
No 271
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.9e-34 Score=299.18 Aligned_cols=190 Identities=23% Similarity=0.261 Sum_probs=159.0
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC---CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV---KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
||+|+||.||+|+.. ++..||+|++.... .....+..|..++.+. +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999965 68999999986432 1223345566666554 699999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+|||+++........
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~- 152 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT- 152 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC-
Confidence 999999853 34688999999999999999999999 9999999999999999999999999999754322111
Q ss_pred cccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 153 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 153 ---TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred ---ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 1233589999999998754 478999999999999999999999965
No 272
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=287.48 Aligned_cols=200 Identities=28% Similarity=0.383 Sum_probs=178.7
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
.+.|+.-++||+|+||.||-...+ +|+.+|.|++.+.+ ..+...++|-.+|.++..+.||.+-..|++.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356888899999999999998855 68999999886543 4455678899999999999999999899999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+..|.||+|.-+|....+ ..+++..++.+|.+|+.||++||.+ +|+.||+||+|||+|+.|+++|+|.|+|..+.
T Consensus 264 LtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999976543 6799999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.... ..+++||.||||||++....|+...|.||+||+||||+.|+.||..
T Consensus 339 ~g~~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 339 EGKP-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred CCCc-----cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 5433 3455799999999999999999999999999999999999999964
No 273
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.1e-33 Score=294.32 Aligned_cols=196 Identities=23% Similarity=0.340 Sum_probs=166.3
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------ 372 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 372 (623)
..++|...+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 356788999999999999999985 467899999986542 2345677899999999999999999887543
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
...+++++++ +++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 3468999988 789998874 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++...... .+..||..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 164 LARQADDEM-------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred cceecCCCc-------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 998654311 12347899999999876 56889999999999999999999999653
No 274
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.4e-33 Score=283.73 Aligned_cols=254 Identities=26% Similarity=0.367 Sum_probs=190.2
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc-----------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR-----------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKK 373 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 373 (623)
+|...+.||+|+||.||+|... ++..+++|.+..... ..+.+..|+.++.+++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3666789999999999999854 688999998753210 1245788999999999999999999999999
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++|+||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999999643 4688999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHH
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV--ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQL 531 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~ 531 (623)
++........ .......++..|+|||.+.... ++.++||||||+++||+++|..||...... ......
T Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~- 224 (272)
T cd06629 155 SKKSDDIYDN--DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-------AAMFKL- 224 (272)
T ss_pred cccccccccc--cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-------HHHHHh-
Confidence 9865321111 1112234788999999987654 789999999999999999999998642211 111110
Q ss_pred hccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 532 SSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 532 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
... .....+...... ....+ +..+...|+. .+|++||++++|++.
T Consensus 225 ~~~-~~~~~~~~~~~~-~~~~~---~~~li~~~l~-~~p~~Rps~~~il~~ 269 (272)
T cd06629 225 GNK-RSAPPIPPDVSM-NLSPV---ALDFLNACFT-INPDNRPTARELLQH 269 (272)
T ss_pred hcc-ccCCcCCccccc-cCCHH---HHHHHHHHhc-CChhhCCCHHHHhhC
Confidence 000 000001111100 11233 3334456766 899999999999763
No 275
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-33 Score=287.92 Aligned_cols=199 Identities=24% Similarity=0.366 Sum_probs=168.5
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|++|.||+|+.. +++.|++|++.... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999865 68899999886432 2235788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ ++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 68999886433 35689999999999999999999999 99999999999999999999999999998654322
Q ss_pred CcccccccCCCCcccccCcccccCCC-CCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLV-ATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. .....++..|+|||++.+.. ++.++||||||+++|||+||+.||...
T Consensus 155 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 155 RT----YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred cc----cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 11 11223678899999886544 588999999999999999999999754
No 276
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-33 Score=284.83 Aligned_cols=252 Identities=23% Similarity=0.376 Sum_probs=196.0
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|+..+.||+|++|.||++... +++.+++|.+.... ...+.+.+|++.+++++||||+++++++......++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677789999999999999975 68899999886543 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++++|.+++.... ..+++.....++.|++.|++|||+ . +++|+||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 82 DGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred CCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 9999999996432 568889999999999999999999 7 99999999999999999999999999987653211
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
.. ...++..|+|||++.+..++.++||||||+++|||++|+.||...... .....+..........
T Consensus 156 ~~------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~----- 221 (265)
T cd06605 156 AK------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP---PDGIFELLQYIVNEPP----- 221 (265)
T ss_pred hh------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc---cccHHHHHHHHhcCCC-----
Confidence 11 134788999999999889999999999999999999999999653221 1112222221111100
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.+.....+.+ +.+++..|+. .+|++|||+.+++..
T Consensus 222 -~~~~~~~~~~~---~~~li~~~l~-~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 222 -PRLPSGKFSPD---FQDFVNLCLI-KDPRERPSYKELLEH 257 (265)
T ss_pred -CCCChhhcCHH---HHHHHHHHcC-CCchhCcCHHHHhhC
Confidence 00000002233 4445556776 899999999998753
No 277
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.9e-33 Score=286.23 Aligned_cols=201 Identities=21% Similarity=0.296 Sum_probs=167.9
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++++|...+.||+|+||.||+|... ++..|++|++.... .....+.+|++++++++|+||+++.+++...+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3567888999999999999999854 68899999986542 23346788999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||++ +++.+++... ...+.+..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+|||+++....
T Consensus 83 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 6777776432 23577888899999999999999999 999999999999999999999999999976432
Q ss_pred CCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.... .....+++.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 156 PSQT----YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred CCCC----CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 2111 1223468899999998753 4788999999999999999999999754
No 278
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.6e-33 Score=284.33 Aligned_cols=247 Identities=21% Similarity=0.315 Sum_probs=192.2
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc--cccHHHHHHHHHHhCCCC---CCCCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS--QRSEKEFVAEMATLGSVK---NRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV~ 379 (623)
.|+..+.||+|+||.||+|.. .++..+++|.+... ......+.+|++++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 466778999999999999996 57899999988643 234567888999988886 999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++.. ..+++...+.++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999999852 3688999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... ....|+..|+|||++.+. .++.++||||||+++|||++|+.||...... .+..... .
T Consensus 154 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~~~-~---- 216 (277)
T cd06917 154 NSSKR----STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMMLIP-K---- 216 (277)
T ss_pred Ccccc----ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhhccc-c----
Confidence 32211 123478899999988654 4689999999999999999999999653221 1111000 0
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...+.+.......+ +..++..|+. .+|++||++.|+++.
T Consensus 217 -~~~~~~~~~~~~~~---~~~~i~~~l~-~~p~~R~~~~~il~~ 255 (277)
T cd06917 217 -SKPPRLEDNGYSKL---LREFVAACLD-EEPKERLSAEELLKS 255 (277)
T ss_pred -CCCCCCCcccCCHH---HHHHHHHHcC-CCcccCcCHHHHhhC
Confidence 00111111112233 4445556776 899999999999763
No 279
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.6e-33 Score=282.26 Aligned_cols=248 Identities=21% Similarity=0.348 Sum_probs=193.5
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|+||.||++..+ +|..+++|.+.... ...+.+.+|++++++++|+|++++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677899999999999999965 58889999986532 3445788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgla~~~~~~ 460 (623)
+++++|.+++.... +..+++..+..++.|++.|++|||+. +++|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999986432 24579999999999999999999998 999999999999999875 4699999999876432
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
... .....|++.|+|||+..+..++.++||||||+++|||++|..||.... ..+++...... ....+
T Consensus 156 ~~~----~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~-~~~~~ 222 (257)
T cd08225 156 MEL----AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--------LHQLVLKICQG-YFAPI 222 (257)
T ss_pred ccc----ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcc-cCCCC
Confidence 211 112247889999999988889999999999999999999999986422 12222221111 10000
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
......+ +.++..+|+. .+|++|||+.|+++
T Consensus 223 ------~~~~~~~---~~~~i~~~l~-~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 ------SPNFSRD---LRSLISQLFK-VSPRDRPSITSILK 253 (257)
T ss_pred ------CCCCCHH---HHHHHHHHhc-cChhhCcCHHHHhh
Confidence 0112233 4444456666 88999999999975
No 280
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.6e-33 Score=286.48 Aligned_cols=199 Identities=22% Similarity=0.346 Sum_probs=168.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++|...+.||+|++|.||+|..+ +++.|++|.+.... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56888899999999999999965 68899999986532 2234567899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++ +|.+++.... ..+++.....++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~-~L~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LDT-DLKQYMDDCG---GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 985 9999886432 3688999999999999999999999 99999999999999999999999999987543211
Q ss_pred CcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. .....++..|+|||++.+ ..++.++||||+|+++|||++|+.||...
T Consensus 158 ~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 158 KT----YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred cc----ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11 112236788999998865 45789999999999999999999999654
No 281
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=9.8e-34 Score=289.90 Aligned_cols=243 Identities=23% Similarity=0.365 Sum_probs=188.4
Q ss_pred cceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 310 NNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
...||+|+||.||++... ++..|++|.+.... ...+.+.+|+..+++++|+|++++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 467999999999999864 68899999886533 3345688999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.........
T Consensus 107 ~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~---- 174 (292)
T cd06658 107 TDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---- 174 (292)
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccccc----
Confidence 998842 3588999999999999999999999 9999999999999999999999999999765332111
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
.....++..|+|||+..+..++.++||||||+++|||++|+.||....... .+ ... ...+.+.+..
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----~~----~~~------~~~~~~~~~~ 240 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ----AM----RRI------RDNLPPRVKD 240 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HH----HHH------HhcCCCcccc
Confidence 122347889999999988889999999999999999999999986432210 01 000 0011111111
Q ss_pred -CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 548 -KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 548 -~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
....+.+..++ ..|+. .+|++|||++|+++.
T Consensus 241 ~~~~~~~~~~li---~~~l~-~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFL---DLMLV-REPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHH---HHHcc-CChhHCcCHHHHhhC
Confidence 11223333333 34544 899999999999874
No 282
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.4e-33 Score=287.22 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=193.9
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.||++.. .++..|++|.+.... ...+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5688889999999999999985 467889999986433 34567889999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++++|.+++.. ..+++..+..++.+++.|+.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999999852 3578999999999999999999999 999999999999999999999999999876544322
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
.. ....+++.|+|||.+....++.++||||||+++||+++|+.||......+... ....... .. ..
T Consensus 171 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~--------~~~~~~~-~~-~~ 236 (293)
T cd06647 171 KR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--------LIATNGT-PE-LQ 236 (293)
T ss_pred cc----ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee--------ehhcCCC-CC-CC
Confidence 11 12247889999999988888999999999999999999999997533211100 0000000 00 00
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
........ +..++..|+. .+|++||++.+++..
T Consensus 237 ---~~~~~~~~---l~~li~~~l~-~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 ---NPEKLSAI---FRDFLNRCLE-MDVEKRGSAKELLQH 269 (293)
T ss_pred ---CccccCHH---HHHHHHHHcc-CChhhCcCHHHHhcC
Confidence 00011222 3334456766 899999999999865
No 283
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=7.7e-34 Score=289.26 Aligned_cols=197 Identities=23% Similarity=0.346 Sum_probs=166.1
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|+||.||+|... +|..+++|++.... .....+.+|++++++++|||++++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3677889999999999999965 68899999986432 2235677899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ ++|.+++... ...+++..++.++.|+++||.|||+. +++||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 97 5888877532 24589999999999999999999999 99999999999999999999999999998654321
Q ss_pred CcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.. .....++..|+|||++.+. .++.++|||||||++|||+||+.|+..
T Consensus 154 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~ 202 (284)
T cd07839 154 RC----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 202 (284)
T ss_pred CC----cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 11 1223468899999988664 468999999999999999999999754
No 284
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.2e-33 Score=288.05 Aligned_cols=244 Identities=22% Similarity=0.325 Sum_probs=189.3
Q ss_pred ccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCC
Q 006982 309 KNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGS 386 (623)
Q Consensus 309 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 386 (623)
....||+|+||.||++... +++.|++|.+.... ...+.+.+|+.++..++|||++++++++...+..++|+||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999864 68999999986432 345668899999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccc
Q 006982 387 LYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLST 466 (623)
Q Consensus 387 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~ 466 (623)
|.+++. ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++..........
T Consensus 105 L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~-- 174 (297)
T cd06659 105 LTDIVS-----QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR-- 174 (297)
T ss_pred HHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc--
Confidence 999874 24588999999999999999999999 99999999999999999999999999997654321111
Q ss_pred cccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhh
Q 006982 467 FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLV 546 (623)
Q Consensus 467 ~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 546 (623)
....++..|+|||++.+..++.++||||||+++|||++|+.||......+ -....... . ...+.
T Consensus 175 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~-~-----~~~~~ 238 (297)
T cd06659 175 --KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--------AMKRLRDS-P-----PPKLK 238 (297)
T ss_pred --cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcc-C-----CCCcc
Confidence 12347899999999998889999999999999999999999996432211 01111000 0 00000
Q ss_pred -cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 547 -AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 547 -~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
......++..+ +..|+. .+|++||++.++++.
T Consensus 239 ~~~~~~~~l~~~---i~~~l~-~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 NAHKISPVLRDF---LERMLT-REPQERATAQELLDH 271 (297)
T ss_pred ccCCCCHHHHHH---HHHHhc-CCcccCcCHHHHhhC
Confidence 01122333333 344554 899999999999885
No 285
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=292.56 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=198.8
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEeccccc----cHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQR----SEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 378 (623)
..|...+.||+|.||.||++..+. |+.+|+|.+.+... +...+.+|+++|.++. |||||.+.+.+++....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 457777899999999999999664 99999999976542 3468899999999998 99999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC----CCeEEeecccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD----FEPKISDFGLA 454 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~----~~~kl~Dfgla 454 (623)
||++.||.|.+.+... .+++..+..++.|++.++.|||+. +|+||||||+|+|+... +.+|++|||++
T Consensus 115 mEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 9999999999999643 289999999999999999999998 99999999999999643 47999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
..... .. ...+.+||+.|+|||++....|+..+||||.||++|.|++|..||......+... .....
T Consensus 187 ~~~~~-~~----~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--------~i~~~ 253 (382)
T KOG0032|consen 187 KFIKP-GE----RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--------AILRG 253 (382)
T ss_pred eEccC-Cc----eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--------HHHcC
Confidence 98765 22 2334569999999999999999999999999999999999999998754322211 11111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. ++-++.+. ...+.+..+++ .+...||..|+|+.++++.
T Consensus 254 -~~-~f~~~~w~--~is~~akd~i~----~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 254 -DF-DFTSEPWD--DISESAKDFIR----KLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -CC-CCCCCCcc--ccCHHHHHHHH----HhcccCcccCCCHHHHhcC
Confidence 00 11111111 12344444443 3333889999999999984
No 286
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.1e-33 Score=280.29 Aligned_cols=251 Identities=26% Similarity=0.416 Sum_probs=197.9
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|...+.||+|++|.||++... ++..|++|++.... .....+.+|++.+.+++|+|++++++++...+..++|+||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5778899999999999999976 58999999987654 34567899999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++++|.+++... ..+++..++.++.|+++|++|||+ . +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 82 DGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 999999999632 568999999999999999999999 8 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ....+........ .
T Consensus 155 ~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~-~----- 219 (264)
T cd06623 155 DQC----NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDG-P----- 219 (264)
T ss_pred Ccc----cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcC-C-----
Confidence 221 122367899999999988899999999999999999999999975432 0111111111111 0
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...+.....++. +..++..|+. .+|++||++.|+++.
T Consensus 220 ~~~~~~~~~~~~---l~~li~~~l~-~~p~~R~~~~~ll~~ 256 (264)
T cd06623 220 PPSLPAEEFSPE---FRDFISACLQ-KDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCCcccCCHH---HHHHHHHHcc-CChhhCCCHHHHHhC
Confidence 001111112333 3444445665 889999999999874
No 287
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.3e-33 Score=284.98 Aligned_cols=253 Identities=24% Similarity=0.391 Sum_probs=197.7
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.++.|+..+.||+|++|.||++... ++..+++|.+.........+.+|++.+++++|+|++++++++......++|+||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 3456777889999999999999976 688999999976544566788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 97 MDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred cCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 99999999996432 3789999999999999999999998 99999999999999999999999999987654322
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
... ....++..|+|||++.+..++.++|||||||++|||++|+.||...... ........ .......
T Consensus 171 ~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~ 237 (286)
T cd06614 171 SKR----NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLITT-KGIPPLK 237 (286)
T ss_pred hhh----ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHh-cCCCCCc
Confidence 111 1223678999999998888999999999999999999999998642211 00111000 0000000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+ ....+.+ +..++..|+. .+|.+||++.++++.
T Consensus 238 ~----~~~~~~~---l~~li~~~l~-~~p~~Rpt~~~il~~ 270 (286)
T cd06614 238 N----PEKWSPE---FKDFLNKCLV-KDPEKRPSAEELLQH 270 (286)
T ss_pred c----hhhCCHH---HHHHHHHHhc-cChhhCcCHHHHhhC
Confidence 0 0112233 3344556766 899999999999763
No 288
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=298.01 Aligned_cols=242 Identities=25% Similarity=0.390 Sum_probs=190.8
Q ss_pred eeeccCccEEEEEEeC-CCcEEEEEEeccc-cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhh
Q 006982 312 IIGSGRTGTMYKALLE-DGTSLMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD 389 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 389 (623)
+||+|.||+||-|+.. +...+|+|.+... .+..+-...|+...+.++|.|||+.+|.+.+++..-+.||.+|||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 7999999999999955 4667899988654 3445667889999999999999999999999998899999999999999
Q ss_pred hccCCCCCCCcc--ChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeEEeecccccccCCCCCcccc
Q 006982 390 LLHPADDTGKSV--DWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPIDTHLST 466 (623)
Q Consensus 390 ~l~~~~~~~~~l--~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~~~~~~~~~~~~ 466 (623)
+|..+.+ ++ ++.+.-.+..||.+||.|||++ .|+|||||-.||||+ ..|.+||+|||-++++.....-..+
T Consensus 662 LLrskWG---PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 662 LLRSKWG---PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred HHHhccC---CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 9976543 44 6778888999999999999999 999999999999995 7899999999999987643332222
Q ss_pred cccCCCCcccccCcccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 467 FVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 467 ~~~~~~gt~~y~aPE~~~~~--~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
+ .||..|||||++..+ .|..++|||||||.+.||.||++||.....+.. ..++- .+.+
T Consensus 736 F----TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------AMFkV-----GmyK----- 795 (1226)
T KOG4279|consen 736 F----TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------AMFKV-----GMYK----- 795 (1226)
T ss_pred c----ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH------hhhhh-----ccee-----
Confidence 2 389999999999765 478899999999999999999999975433211 00000 0000
Q ss_pred hhcCCCHHHHHHH-HHHHhhccCCCCCCCCCCHHHHHH
Q 006982 545 LVAKGVDNELFQF-LKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 545 l~~~~~~~~~~~~-~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.....++++.+- -..+++|-. +||.+||++.+++.
T Consensus 796 -vHP~iPeelsaeak~FilrcFe-pd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 796 -VHPPIPEELSAEAKNFILRCFE-PDPCDRPSAKDLLQ 831 (1226)
T ss_pred -cCCCCcHHHHHHHHHHHHHHcC-CCcccCccHHHhcc
Confidence 111234444443 345567877 99999999999875
No 289
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-35 Score=302.16 Aligned_cols=196 Identities=26% Similarity=0.426 Sum_probs=165.8
Q ss_pred cceeeccCccEEEEEEeC-CCcEEEEEEec-----cccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe--eeEEEec
Q 006982 310 NNIIGSGRTGTMYKALLE-DGTSLMVKRLQ-----DSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE--RLLVYKH 381 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lV~e~ 381 (623)
..+||+|+|-+||||... +|..||---++ ......+.|..|+++|+.|+||||++++.++.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 468999999999999964 57777743222 233445789999999999999999999999987665 6689999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~~~~~~ 460 (623)
+..|+|..|++.. +.++.....+++.||.+||.|||++ .|+|+|||||..||+|+ .-|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999744 4577788999999999999999997 67899999999999997 5689999999999987653
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~ 517 (623)
... ...|||.|||||... ..|++.+||||||+.++||+|+..||.....+
T Consensus 200 ~ak------svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~ 249 (632)
T KOG0584|consen 200 HAK------SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP 249 (632)
T ss_pred ccc------eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH
Confidence 221 235999999999987 67899999999999999999999999866554
No 290
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.6e-33 Score=285.61 Aligned_cols=256 Identities=17% Similarity=0.190 Sum_probs=193.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
+|...+.||+|+||.||++... .++.|++|.+.... .....+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999965 57889999886542 234567889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++.. ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 82 YVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999953 24588999999999999999999998 9999999999999999999999999998742110
Q ss_pred CCc-----------ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHH
Q 006982 461 DTH-----------LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 461 ~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
... .........++..|+|||++....++.++|+||||+++|||++|..||..... .++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~ 226 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 226 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 000 00000112467899999999888899999999999999999999999964321 11111
Q ss_pred HHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 530 QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
...... ...+.. ....+.++ ..++.+|+. .+|++||++.++.+.|+.
T Consensus 227 ~~~~~~----~~~~~~-~~~~~~~~---~~li~~~l~-~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 227 QVISDD----IEWPEG-DEALPADA---QDLISRLLR-QNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHhcc----cCCCCc-cccCCHHH---HHHHHHHhc-cChhhccCccCHHHHHhC
Confidence 111100 000000 01123333 444556766 999999998777766664
No 291
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-34 Score=268.09 Aligned_cols=198 Identities=25% Similarity=0.428 Sum_probs=170.4
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc------c---cHHHHHHHHHHhCCC-CCCCCcceeEEEEeC
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ------R---SEKEFVAEMATLGSV-KNRNLVPLLGFCMAK 372 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~---~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 372 (623)
.+.|...+++|.|..+.|.+..+ ++|...|+|++.... . -.+.-..|+.+|+++ .||+|+.+.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 45677889999999999988875 468889999885321 1 123346799999999 799999999999999
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
...++|+|.|+.|.|+++|. ..-.+++....+|+.|+..|++|||.. .|+||||||+|||+|++.++||+|||
T Consensus 96 sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred chhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999995 335689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCccccc------CCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR------TLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
+++.+.+... ....+||++|+|||.+. ...|+..+|.|+.|||+|.++.|..||..
T Consensus 169 Fa~~l~~Gek-----LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH 230 (411)
T KOG0599|consen 169 FACQLEPGEK-----LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH 230 (411)
T ss_pred eeeccCCchh-----HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH
Confidence 9998876432 33456999999999874 34578899999999999999999999963
No 292
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.4e-33 Score=279.58 Aligned_cols=248 Identities=22% Similarity=0.307 Sum_probs=196.5
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|++|.||++... ++..+++|.+.... .....+.+|++++++++|+||+++++++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677899999999999999854 67899999986532 3345678899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++.........+++..++.++.+++.||+|||+. +++|+||+|+||++++++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999865433346789999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
......+++.|+|||.+.+..++.++|+||||+++|||++|+.||...... .+...+ .......
T Consensus 157 -----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~----~~~~~~~-- 220 (256)
T cd08530 157 -----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYKV----QRGKYPP-- 220 (256)
T ss_pred -----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH----hcCCCCC--
Confidence 112234788999999999888999999999999999999999999643221 011110 1111000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
........+..++..|+. .+|++||++.|+++
T Consensus 221 -------~~~~~~~~~~~li~~~l~-~~p~~Rp~~~~~l~ 252 (256)
T cd08530 221 -------IPPIYSQDLQNFIRSMLQ-VKPKLRPNCDKILA 252 (256)
T ss_pred -------CchhhCHHHHHHHHHHcC-CCcccCCCHHHHhc
Confidence 011112335555667776 88999999999875
No 293
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.5e-33 Score=282.35 Aligned_cols=199 Identities=22% Similarity=0.280 Sum_probs=170.8
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|++|.||+|... +++.|++|+++... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5788899999999999999975 57899999886532 3346788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++++.+..+... ...+++..+..++.+++.|++|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 82 VERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 998777766532 24588999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
... .....++..|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 155 ~~~---~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 205 (288)
T cd07833 155 ASP---LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD 205 (288)
T ss_pred ccc---ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 1123467889999999887 7899999999999999999999998753
No 294
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7e-33 Score=282.30 Aligned_cols=199 Identities=23% Similarity=0.342 Sum_probs=169.9
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|++|.||+|... +++.|++|++.... .....+.+|+.++++++|||++++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677889999999999999964 68999999986543 2346789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 999999986432 5689999999999999999999999 99999999999999999999999999998765422
Q ss_pred CcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. .......++..|+|||.+.+. .++.++||||+|+++|||++|..||...
T Consensus 154 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 204 (286)
T cd07832 154 P---RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE 204 (286)
T ss_pred C---CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC
Confidence 1 111223478899999998654 4689999999999999999998777543
No 295
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.8e-33 Score=274.93 Aligned_cols=248 Identities=26% Similarity=0.405 Sum_probs=196.3
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc-cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR-SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
+|...+.||+|++|.||++... ++..+++|++..... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4677889999999999999975 688999999976543 55788999999999999999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+++|.+++.... ..+++..+..++.+++.++.|||.. +++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 999999986432 4689999999999999999999998 999999999999999999999999999987654321
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
.....++..|+|||++....++.++||||||+++|||++|+.||...... ........ ........
T Consensus 154 ----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~- 219 (253)
T cd05122 154 ----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--------KALFKIAT-NGPPGLRN- 219 (253)
T ss_pred ----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--------HHHHHHHh-cCCCCcCc-
Confidence 11234788999999998888999999999999999999999998643211 11111000 00000000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
......+ +.+++..|+. .+|++|||+.|+++
T Consensus 220 ---~~~~~~~---~~~~i~~~l~-~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 ---PEKWSDE---FKDFLKKCLQ-KNPEKRPTAEQLLK 250 (253)
T ss_pred ---ccccCHH---HHHHHHHHcc-CChhhCCCHHHHhc
Confidence 0001233 4445557776 89999999999875
No 296
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=9.5e-33 Score=285.62 Aligned_cols=206 Identities=24% Similarity=0.330 Sum_probs=168.8
Q ss_pred cCcccceeeccCccEEEEEEeC---CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Ceee
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE---DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERL 376 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 376 (623)
+|...+.||+|++|.||+|... ++..||+|.+.... .....+.+|++++.+++|||++++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999965 47899999997632 2235678899999999999999999999988 7889
Q ss_pred EEEecCCCCCHhhhccCCCCC-CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC----CCCeEEeec
Q 006982 377 LVYKHMPNGSLYDLLHPADDT-GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD----DFEPKISDF 451 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~----~~~~kl~Df 451 (623)
+|+||+++ ++.+++...... ...+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 677766433222 23688999999999999999999999 9999999999999999 999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
|+++........ .....+..++..|+|||++.+ ..++.++||||||+++|||++|+.||.....
T Consensus 157 g~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 157 GLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred ccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 999876432211 111223457889999998765 4578999999999999999999999976543
No 297
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8e-33 Score=282.15 Aligned_cols=245 Identities=21% Similarity=0.337 Sum_probs=191.4
Q ss_pred CcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 307 FSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
|...+.||+|++|.||++.. .++..+++|++.... ...+.+.+|+.+++.++|||++++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44567999999999999985 478899999886433 3345688999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.........
T Consensus 101 ~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~- 171 (285)
T cd06648 101 GALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPR- 171 (285)
T ss_pred CCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcc-
Confidence 999999853 4588999999999999999999999 9999999999999999999999999988765332111
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
.....|++.|+|||...+..++.++||||||+++|||++|+.||..... .......... . .+.
T Consensus 172 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------~~~~~~~~~~-~-----~~~ 234 (285)
T cd06648 172 ---RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------LQAMKRIRDN-L-----PPK 234 (285)
T ss_pred ---cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHhc-C-----CCC
Confidence 1123478899999999888899999999999999999999999864321 1111111111 0 000
Q ss_pred hhc-CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 545 LVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 545 l~~-~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+.. ..... .+..++..|+. .+|++||++.++++
T Consensus 235 ~~~~~~~~~---~l~~li~~~l~-~~p~~Rpt~~~il~ 268 (285)
T cd06648 235 LKNLHKVSP---RLRSFLDRMLV-RDPAQRATAAELLN 268 (285)
T ss_pred CcccccCCH---HHHHHHHHHcc-cChhhCcCHHHHcc
Confidence 100 01222 34455556776 89999999999885
No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.7e-33 Score=284.66 Aligned_cols=246 Identities=25% Similarity=0.351 Sum_probs=188.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
..|...+.||+|+||.||+|... +++.|++|.+.... ...+.+.+|+++++.++|||++++.+++.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34777899999999999999965 68899999885432 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||++ |++.+++... ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9997 5777776432 24589999999999999999999998 999999999999999999999999999976543
Q ss_pred CCCcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
.. ...++..|+|||++. ...++.++||||||+++|||++|+.||...... ......... .
T Consensus 168 ~~--------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--------~~~~~~~~~-~ 230 (307)
T cd06607 168 AN--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQN-D 230 (307)
T ss_pred CC--------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--------HHHHHHhcC-C
Confidence 21 123678899999874 456889999999999999999999998643211 101110000 0
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
. +.+......++ +..+...|+. .+|++||++.+++...
T Consensus 231 ~-----~~~~~~~~~~~---~~~li~~~l~-~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 231 S-----PTLSSNDWSDY---FRNFVDSCLQ-KIPQDRPSSEELLKHR 268 (307)
T ss_pred C-----CCCCchhhCHH---HHHHHHHHhc-CChhhCcCHHHHhcCh
Confidence 0 00001111223 4444556776 8999999999998753
No 299
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.3e-32 Score=275.21 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=197.0
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 379 (623)
+|...+.||+|++|.||+|... ++..|++|++.... ...+.+.+|++.+++++|||++++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3677889999999999999976 78899999987654 3467789999999999999999999999988 8889999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++... ..+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998632 3789999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.... .......++..|+|||......++.++||||||+++|||++|..||..... ................
T Consensus 154 ~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~ 224 (260)
T cd06606 154 IETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-------PMAALYKIGSSGEPPE 224 (260)
T ss_pred cccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------hHHHHHhccccCCCcC
Confidence 3221 011223478899999999888899999999999999999999999975431 1111111110001101
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+ ...... .+.+++.+|+. .+|++||++.|++.
T Consensus 225 ~------~~~~~~---~l~~~i~~~l~-~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 I------PEHLSE---EAKDFLRKCLR-RDPKKRPTADELLQ 256 (260)
T ss_pred C------CcccCH---HHHHHHHHhCc-CChhhCCCHHHHhh
Confidence 0 011122 34444557777 89999999999975
No 300
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.3e-33 Score=285.24 Aligned_cols=200 Identities=23% Similarity=0.284 Sum_probs=168.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 378 (623)
++|...+.||+|+||.||+|..+ +++.+++|.++.... ....+.+|++++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46788899999999999999976 588999999865432 234567899999999999999999999877 789999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++ +|.+++.... ..+++..++.++.|++.||+|||+. +++|+||||+||++++++.++|+|||+++...
T Consensus 85 ~e~~~~-~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999974 9999886432 3689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
..... .....+++.|+|||.+.+. .++.++|+||||+++|||++|+.||....
T Consensus 158 ~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~ 211 (293)
T cd07843 158 SPLKP----YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS 211 (293)
T ss_pred CCccc----cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 42211 1223467889999988654 46889999999999999999999997543
No 301
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1e-32 Score=281.01 Aligned_cols=199 Identities=26% Similarity=0.347 Sum_probs=168.2
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeEEEe
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLLVYK 380 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e 380 (623)
|...+.||+|++|.||+|... +++.+++|++.... .....+.+|++++++++|||++++++++... ...++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 556788999999999999966 58899999997652 3345688999999999999999999999888 78999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++ +|.+++... ...+++..++.++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 899888543 24689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
.. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....
T Consensus 154 ~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~ 206 (287)
T cd07840 154 NS---ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST 206 (287)
T ss_pred Cc---ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 21 11122346788999997754 457899999999999999999999997543
No 302
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.3e-32 Score=285.04 Aligned_cols=249 Identities=27% Similarity=0.365 Sum_probs=191.1
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
|...+.||+|+||.||+++.. ++..+++|.+.... .....+.+|++++++++|||++++++++.+.+..++|+||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666789999999999999964 68899999986432 2235688899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ |++.+.+... ...++|.++..++.+++.|+.|||+. +|+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 107 CL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 97 4888777432 24589999999999999999999999 9999999999999999999999999998764331
Q ss_pred CcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
....++..|+|||++. ...++.++|||||||++|||++|+.||...... .....+.. ...
T Consensus 179 -------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~~~~~~~~----~~~-- 241 (317)
T cd06635 179 -------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQ----NES-- 241 (317)
T ss_pred -------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHh----ccC--
Confidence 1223788999999973 456889999999999999999999998642111 00111111 000
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
.........+. +..++..|+. .+|.+||++.+|++.+..+..
T Consensus 242 ----~~~~~~~~~~~---l~~li~~~l~-~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 242 ----PTLQSNEWSDY---FRNFVDSCLQ-KIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred ----CCCCCccccHH---HHHHHHHHcc-CCcccCcCHHHHHhChhhhcc
Confidence 00001112223 3445556776 899999999999987765543
No 303
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-32 Score=279.65 Aligned_cols=198 Identities=24% Similarity=0.347 Sum_probs=167.3
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
|+..+.||+|++|.||+|... +|..|++|++.... .....+.+|++++++++|||++++++++.+.+..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999864 79999999986542 23356888999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
+ ++|.+++..... ..+++..++.++.|+++||+|||+. +++||||+|+||++++++.++|+|||+++.......
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 699999864322 4689999999999999999999998 999999999999999999999999999976543211
Q ss_pred cccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. .....++..|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 155 ~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 155 T----YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred c----cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1122367889999987654 5689999999999999999999999754
No 304
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-32 Score=282.00 Aligned_cols=202 Identities=21% Similarity=0.285 Sum_probs=166.7
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCe-----
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKE----- 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 374 (623)
++|+..+.||+|+||.||+|... +++.|++|.+..... ....+.+|+.++.+++ |||++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888899999999999999965 689999998865432 2356788999999995 6999999999887665
Q ss_pred eeEEEecCCCCCHhhhccCCCCC-CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeecc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDT-GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFG 452 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfg 452 (623)
.++||||+++ +|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 898887643322 35689999999999999999999999 9999999999999998 8999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++........ .....+++.|+|||++.+ ..++.++||||||+++|||++|..||...
T Consensus 157 ~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 215 (295)
T cd07837 157 LGRAFSIPVKS----YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD 215 (295)
T ss_pred cceecCCCccc----cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99865332111 112236788999998865 45789999999999999999999999754
No 305
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.2e-32 Score=280.17 Aligned_cols=258 Identities=16% Similarity=0.261 Sum_probs=178.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCC----cEEEEEEecccccc------------HHHHHHHHHHhCCCCCCCCcceeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDG----TSLMVKRLQDSQRS------------EKEFVAEMATLGSVKNRNLVPLLGF 368 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~h~niv~l~~~ 368 (623)
++|.+.++||+|+||.||+|...+. ..+++|........ ......+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5688899999999999999997543 45566643222111 1112334456777899999999997
Q ss_pred EEeCC----eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC
Q 006982 369 CMAKK----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF 444 (623)
Q Consensus 369 ~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~ 444 (623)
+.... ..++++|++.. ++.+.+... ...++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 66543 34678887744 666666421 2356788899999999999999999 999999999999999999
Q ss_pred CeEEeecccccccCCCCCccc---ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccc-
Q 006982 445 EPKISDFGLARLMNPIDTHLS---TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF- 520 (623)
Q Consensus 445 ~~kl~Dfgla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~- 520 (623)
.++|+|||+++.......... .......||+.|+|||+..+..++.++|||||||++|||++|+.||.........
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 999999999987643221111 1112235899999999999999999999999999999999999999764221110
Q ss_pred cccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 521 KGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 521 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
.....++.... ..........++++.++++ ||++.+|++||+++++.+.+
T Consensus 244 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCDFIKRL---------HEGKIKIKNANKFIYDFIE----CVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHHHHHHh---------hhhhhccCCCCHHHHHHHH----HHHhCCCCCCCCHHHHHHhh
Confidence 00011111111 1111111122344444433 33348899999999999876
No 306
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-33 Score=305.69 Aligned_cols=202 Identities=18% Similarity=0.252 Sum_probs=158.9
Q ss_pred hccCcccceeeccCccEEEEEEeCC--CcEEEE------------------EEeccccccHHHHHHHHHHhCCCCCCCCc
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED--GTSLMV------------------KRLQDSQRSEKEFVAEMATLGSVKNRNLV 363 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~--~~~vav------------------K~~~~~~~~~~~~~~e~~~l~~l~h~niv 363 (623)
.++|...+.||+|+||.||++..+. +...+. |.+.........+.+|++++.+++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4689999999999999999987532 111111 22222223345688999999999999999
Q ss_pred ceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCC-CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC
Q 006982 364 PLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDT-GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 442 (623)
Q Consensus 364 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~ 442 (623)
++++++...+..++|+|++. ++|.+++...... ...........++.|++.||.|||+. +|+||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence 99999999999999999985 5777776432211 12233556778999999999999999 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 006982 443 DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTN 512 (623)
Q Consensus 443 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~ 512 (623)
++.+||+|||+++.+...... ...+..||..|+|||++.+..++.++|||||||++|||++|..++.
T Consensus 303 ~~~vkL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKEREA---FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred CCCEEEEeCCCceecCccccc---ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 999999999999876432211 1123458999999999999999999999999999999999886543
No 307
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.4e-34 Score=297.85 Aligned_cols=198 Identities=25% Similarity=0.349 Sum_probs=172.3
Q ss_pred cCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHHHHHHHHHhCCCC-C-----CCCcceeEEEEeCCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-N-----RNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~lV 378 (623)
+|.+.++||+|.||.|-++. .++++.||+|+++....-..+...|+.+|..++ | -|+|++++||...++.+||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 78899999999999999999 456999999999987766677788999999887 4 3899999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC--CCCeEEeecccccc
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD--DFEPKISDFGLARL 456 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~--~~~~kl~Dfgla~~ 456 (623)
+|.+.. +|.++++...- ..++......++.||+.||.+||+. +|||+||||+||||.+ ...+||+|||.+..
T Consensus 267 fELL~~-NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 267 FELLST-NLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ehhhhh-hHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999965 99999986554 4588899999999999999999999 9999999999999964 44799999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
....-. + ..-+.-|+|||++.+.+|+.+.||||||||+.||++|.+-|.+...
T Consensus 341 ~~q~vy---t----YiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne 393 (586)
T KOG0667|consen 341 ESQRVY---T----YIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE 393 (586)
T ss_pred cCCcce---e----eeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence 654221 2 2245679999999999999999999999999999999888876544
No 308
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9.2e-33 Score=288.59 Aligned_cols=200 Identities=23% Similarity=0.377 Sum_probs=166.6
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Cee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KER 375 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 375 (623)
.++|...+.||+|+||.||+|.. .+++.|++|.+... ......+.+|+.++.+++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46789999999999999999985 46899999998642 23345678899999999999999999987654 347
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++ +|.+.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 84 ~lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 84 YIVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccccee
Confidence 899999975 8888874 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.......... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 155 IADPEHDHTG-FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred eccccccccC-CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7543222111 1223457889999998754 5678999999999999999999999965
No 309
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.5e-32 Score=283.23 Aligned_cols=203 Identities=23% Similarity=0.311 Sum_probs=166.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE------ 374 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 374 (623)
++|...+.||+|+||.||+|... ++..||+|.+.... .....+.+|++++++++||||+++++++.....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46888999999999999999965 68899999885432 223456789999999999999999999876543
Q ss_pred --eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 375 --RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 375 --~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
.++|+||+.+ +|.+.+... ...+++.+.+.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 4899999975 888887532 24689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++..................++..|+|||.+.+. .++.++||||||+++|||++|+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 9987643222211122234478899999988654 4688999999999999999999998654
No 310
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.7e-32 Score=278.90 Aligned_cols=196 Identities=23% Similarity=0.328 Sum_probs=172.3
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...+.||+|++|.||++... +++.+++|.+.... ...+.+.+|+++++++.||||+++++++.+....++|+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 35788899999999999999965 68899999986532 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 999999999998632 5688999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. .....+++.|+|||.+.+...+.++||||||+++|||++|+.||...
T Consensus 154 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 201 (290)
T cd05580 154 R-------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD 201 (290)
T ss_pred C-------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 2 11224788999999998888899999999999999999999998653
No 311
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.1e-32 Score=280.72 Aligned_cols=202 Identities=22% Similarity=0.354 Sum_probs=170.2
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
+|+..+.||+|++|.||+|+.. +|..|++|.+.... .....+.+|++++++++|||++++++++.+.+..++|+||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999975 68899999986543 23456778999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++ +|.+++..... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++++|||++........
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 85 89888754332 34689999999999999999999998 999999999999999999999999999976533211
Q ss_pred cccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 463 HLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
. .....++..|++||.+.+ ..++.++||||||+++|||++|+.||.....
T Consensus 156 ~----~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 206 (284)
T cd07836 156 T----FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN 206 (284)
T ss_pred c----cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence 1 122346889999998865 4568899999999999999999999976543
No 312
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=293.26 Aligned_cols=192 Identities=28% Similarity=0.364 Sum_probs=167.2
Q ss_pred CcccceeeccCccEEEEEEe-CCCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
|+..+.||+|+||.||-|+. .+...||+|++.-+. ..-..+..|+..|.+++|||.+.+.|+|......|+||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 56677899999999999994 577899999986542 2235688999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
|-| |-.|++... .+++.+..+..|..+...||+|||+. +.||||||+.|||+++.|.|||+|||.|....+..
T Consensus 108 ClG-SAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn 180 (948)
T KOG0577|consen 108 CLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN 180 (948)
T ss_pred Hhc-cHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCchh
Confidence 954 877877533 25788889999999999999999999 99999999999999999999999999998876533
Q ss_pred CcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.-+|||.|||||++. .++|+-|+||||+|+...|+...++|+..
T Consensus 181 --------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFn 227 (948)
T KOG0577|consen 181 --------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 227 (948)
T ss_pred --------cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccC
Confidence 234999999999885 57899999999999999999999999754
No 313
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=8.3e-33 Score=288.68 Aligned_cols=202 Identities=22% Similarity=0.342 Sum_probs=168.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 376 (623)
++|+..+.||+|++|.||+|... ++..|++|++.... ...+.+.+|+.++.+++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 67888899999999999999954 68999999986532 334567789999999999999999998764 34578
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||+. |+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 85 lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 85 VVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 9999996 699999853 34589999999999999999999998 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
................++..|+|||.+.. ..++.++||||||+++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence 54322222222223457889999998765 46789999999999999999999999754
No 314
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.8e-32 Score=274.26 Aligned_cols=250 Identities=21% Similarity=0.347 Sum_probs=198.3
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|+||.||++... ++..+++|++.... ...+.+.+|++++++++|||++++.+.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677889999999999999965 68899999987543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++......+..+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999975443346799999999999999999999999 99999999999999999999999999998764432
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
. ......+++.|+|||......++.++||||+|+++|+|++|+.||..... .+........ ....+
T Consensus 158 ~----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~~~~- 223 (258)
T cd08215 158 D----LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--------LELALKILKG-QYPPI- 223 (258)
T ss_pred c----eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--------HHHHHHHhcC-CCCCC-
Confidence 1 11223478899999999888899999999999999999999999864321 1111111111 01000
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
. .....+ +..++..|+. .+|++||++.|+++
T Consensus 224 ----~-~~~~~~---~~~~i~~~l~-~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 ----P-SQYSSE---LRNLVSSLLQ-KDPEERPSIAQILQ 254 (258)
T ss_pred ----C-CCCCHH---HHHHHHHHcC-CChhhCcCHHHHhc
Confidence 0 112233 3444556776 89999999999875
No 315
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.4e-33 Score=278.35 Aligned_cols=197 Identities=23% Similarity=0.286 Sum_probs=173.3
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
+|...+.||+|+||.||++... ++..+++|.+.... ...+.+.+|++++++++|||++++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777899999999999999975 58899999986532 345678999999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++++|.+++... ..+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 99999999999532 4688999999999999999999999 9999999999999999999999999999876442
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
. ......++..|+|||.+.+..++.++|+||||+++|+|++|..||...
T Consensus 154 ~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 202 (258)
T cd05578 154 T-----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGH 202 (258)
T ss_pred c-----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCC
Confidence 2 112334788999999998888999999999999999999999999754
No 316
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.1e-32 Score=280.60 Aligned_cols=263 Identities=21% Similarity=0.284 Sum_probs=192.9
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc--cHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR--SEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
|...+.||+|++|.||+|+.. ++..|++|++..... ......+|+..+.+++ |||++++++++..++..++|+||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 556789999999999999975 478899999865433 2334567999999999 999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
+|+|.+++.... +..+++..++.++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 889999886433 24689999999999999999999998 999999999999999999999999999986543221
Q ss_pred cccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccccccc--------HHHHHHHHhc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGN--------LVEWIAQLSS 533 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~--------l~~~~~~~~~ 533 (623)
. ....++..|+|||++. ...++.++|+||||+++|||++|+.||......+..... -..|......
T Consensus 155 ~-----~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 Y-----TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred c-----CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 1 1234788899999874 455789999999999999999999998654332111000 0011111111
Q ss_pred cCchhhhhchhhh---cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 534 TGQLQDAIDKCLV---AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 534 ~~~~~~~~d~~l~---~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.......+..... ..........+..++..|+. .+|++||++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~-~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLR-WDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcc-cCcccCCCHHHHhh
Confidence 1011000000000 00000112346677778887 99999999999875
No 317
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.2e-32 Score=276.84 Aligned_cols=196 Identities=21% Similarity=0.283 Sum_probs=162.3
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeC--CeeeEEEe
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAK--KERLLVYK 380 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~e 380 (623)
|...+.||+|+||.||+|... ++..+++|+++... .......+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456788999999999999954 68899999987542 22334557888888885 99999999999987 78899999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|++ |+|.+.+... ...++|.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 997 5888887532 24689999999999999999999999 9999999999999999 99999999999876432
Q ss_pred CCcccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
... ....++..|+|||++. +..++.++|||||||++|||++|..||....
T Consensus 153 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~ 203 (282)
T cd07831 153 PPY-----TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN 203 (282)
T ss_pred CCc-----CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC
Confidence 211 1123678999999764 4557889999999999999999999997543
No 318
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=306.74 Aligned_cols=259 Identities=26% Similarity=0.414 Sum_probs=200.5
Q ss_pred CcccceeeccCccEEEEEEeC--------CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 307 FSKNNIIGSGRTGTMYKALLE--------DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
....+.+|+|.||.|++|... ....||||.++... ...+.+..|+++|..+ +|+|++.++|+|..++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 344559999999999999842 14579999998654 3467899999999999 699999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCC---C-------CC--CccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC
Q 006982 376 LLVYKHMPNGSLYDLLHPAD---D-------TG--KSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD 443 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~---~-------~~--~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~ 443 (623)
++|.||++.|+|.++|...+ . .. ..+.....+.++.|||.||+||++. +++||||.++|||++++
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKN 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCC
Confidence 99999999999999997655 0 01 2388899999999999999999999 99999999999999999
Q ss_pred CCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCcccccc
Q 006982 444 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFKG 522 (623)
Q Consensus 444 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~~ 522 (623)
..+||+|||+++.....+........++ -+..|||||.+....|+.|+|||||||+||||+| |..||.+.... .
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~----~ 529 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT----E 529 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH----H
Confidence 9999999999997655443322211111 3567999999999999999999999999999999 88888642111 1
Q ss_pred cHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 523 NLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 523 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
.+.+++ +++...+ ......+++. .++..|+. .+|++||++.++++.++...
T Consensus 530 ~l~~~l----~~G~r~~------~P~~c~~eiY---~iM~~CW~-~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 530 ELLEFL----KEGNRME------QPEHCSDEIY---DLMKSCWN-ADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHHHHH----hcCCCCC------CCCCCCHHHH---HHHHHHhC-CCcccCCCHHHHHHHHHHHH
Confidence 112222 2211111 1223344444 44556875 89999999999999999853
No 319
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.6e-32 Score=278.95 Aligned_cols=241 Identities=22% Similarity=0.266 Sum_probs=179.3
Q ss_pred eeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHH---HhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 312 IIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMA---TLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
+||+|+||.||++... +++.+|+|.+.... .....+.+|.. .+...+|||++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 68899999886532 11223344443 3444579999999999999899999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~- 152 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-
Confidence 9999999853 24689999999999999999999999 999999999999999999999999999975533211
Q ss_pred ccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhc
Q 006982 464 LSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAID 542 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 542 (623)
....|+..|+|||.... ..++.++|||||||++|||++|..||....... . ......... ..
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~-~~~~~~~~~------~~ 215 (279)
T cd05633 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----K-HEIDRMTLT------VN 215 (279)
T ss_pred -----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC-----H-HHHHHHhhc------CC
Confidence 12348899999998864 557899999999999999999999997543211 1 111111100 00
Q ss_pred hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 006982 543 KCLVAKGVDNELFQFLKVACNCVLPTIPKERP-----TMFEVYQF 582 (623)
Q Consensus 543 ~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RP-----s~~ev~~~ 582 (623)
..+ ......++.+++ ..|+. .||++|| +++|+++.
T Consensus 216 ~~~-~~~~~~~~~~li---~~~l~-~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 VEL-PDSFSPELKSLL---EGLLQ-RDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cCC-ccccCHHHHHHH---HHHhc-CCHHHhcCCCCCCHHHHHhC
Confidence 001 111234444444 45665 9999999 58888775
No 320
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1e-32 Score=290.21 Aligned_cols=197 Identities=24% Similarity=0.332 Sum_probs=167.3
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-----
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK----- 373 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 373 (623)
..++|...+.||+|+||.||+|... ++..||+|.+... ......+.+|+.++.+++|||++++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3467999999999999999999954 7899999998643 223456778999999999999999999886442
Q ss_pred -eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 374 -ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 374 -~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
..++|+||++ ++|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 4689999996 488888742 278889999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++....... .....++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 164 LARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred cceeCCCCCC-----CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 9987543211 12234788999999999989999999999999999999999999754
No 321
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.5e-32 Score=284.19 Aligned_cols=198 Identities=21% Similarity=0.237 Sum_probs=161.1
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
+.+|.|+++.||++.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3445555555555555 6899999998654 33456789999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc---c
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH---L 464 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~---~ 464 (623)
.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+..+...... .
T Consensus 87 ~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 87 EDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 99996432 24578889999999999999999999 9999999999999999999999999998765332111 1
Q ss_pred cccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
........++..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~ 213 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM 213 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence 111223346788999999865 35789999999999999999999999754
No 322
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9.9e-33 Score=282.68 Aligned_cols=200 Identities=23% Similarity=0.318 Sum_probs=165.8
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|++|.||+|... +++.|++|.+.... .....+.+|++++++++|||++++++++.+....++|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999965 68899999886432 234568889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeecccccccCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLARLMNP 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfgla~~~~~ 459 (623)
|++ ++|.+++.... ...+++.....++.|++.||+|||+. +++|+||+|+||++++ ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 58888774322 23467888889999999999999999 9999999999999985 56799999999976543
Q ss_pred CCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.... .....+++.|+|||++.+ ..++.++||||||+++|||+||+.||...
T Consensus 156 ~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 156 PVRT----FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred Cccc----cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2111 112346789999998865 45789999999999999999999999754
No 323
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.7e-33 Score=282.16 Aligned_cols=252 Identities=22% Similarity=0.326 Sum_probs=186.2
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...+.||+|+||.||++... +++.+++|.+.... .....+.+|+.++.++. ||||+++++++......++++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3455678999999999999964 68999999986532 34557889999999996 99999999999998899999999
Q ss_pred CCCCCHhhhccCC-CCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPA-DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
++. ++.++.... ......+++....+++.+++.||+|||+.. +++||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 555443210 112356899999999999999999999743 8999999999999999999999999999765432
Q ss_pred CCcccccccCCCCcccccCcccccCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTL---VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
... ....++..|+|||++... .++.++|||||||++|||++|+.||.... ...+-+.......
T Consensus 162 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~-- 227 (288)
T cd06616 162 IAK-----TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-------SVFDQLTQVVKGD-- 227 (288)
T ss_pred Ccc-----ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-------hHHHHHhhhcCCC--
Confidence 111 122378899999998765 68899999999999999999999986422 1111111111100
Q ss_pred hhhhchhhhcC---CCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 538 QDAIDKCLVAK---GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 538 ~~~~d~~l~~~---~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.+.+... ....+ +.+++..|+. .+|++|||+++|++.
T Consensus 228 ----~~~~~~~~~~~~~~~---l~~li~~~l~-~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 ----PPILSNSEEREFSPS---FVNFINLCLI-KDESKRPKYKELLEH 267 (288)
T ss_pred ----CCcCCCcCCCccCHH---HHHHHHHHcc-CChhhCcCHHHHhcC
Confidence 0111111 12233 4444556766 999999999998864
No 324
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-32 Score=274.30 Aligned_cols=190 Identities=23% Similarity=0.289 Sum_probs=166.1
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||.|++|.||+++.. +++.+++|.+.... ...+.+.+|++++++++||||+++++++.+....++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999975 48899999986532 3346788999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||+++........
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~---- 149 (262)
T cd05572 81 WTILRDR----GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKT---- 149 (262)
T ss_pred HHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccc----
Confidence 9999642 3588999999999999999999998 9999999999999999999999999999876542211
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....++..|+|||.+....++.++|+||||+++|||++|..||...
T Consensus 150 -~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 195 (262)
T cd05572 150 -WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGED 195 (262)
T ss_pred -ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCC
Confidence 1123688999999998888999999999999999999999999754
No 325
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.8e-32 Score=270.77 Aligned_cols=246 Identities=24% Similarity=0.389 Sum_probs=194.3
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|+..+.||+|++|.||++... ++..|++|.+.... .....+.+|++++.+++|||++++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677899999999999999865 67899999997654 2456789999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 9999999998532 5689999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
.. .....++..|+|||...+..++.++||||+|+++|||++|+.||..... ...... .... ..
T Consensus 154 ~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-------~~~~~~-~~~~-~~---- 216 (254)
T cd06627 154 KD----DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-------MAALFR-IVQD-DH---- 216 (254)
T ss_pred cc----ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHH-Hhcc-CC----
Confidence 21 1223478899999999887889999999999999999999999864321 011000 0000 00
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
..+ .....+++. .++.+|+. .+|++||++.|++.
T Consensus 217 -~~~-~~~~~~~~~---~~i~~~l~-~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 -PPL-PEGISPELK---DFLMQCFQ-KDPNLRPTAKQLLK 250 (254)
T ss_pred -CCC-CCCCCHHHH---HHHHHHHh-CChhhCcCHHHHhc
Confidence 000 011233343 44456665 88999999999874
No 326
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.9e-32 Score=277.75 Aligned_cols=197 Identities=26% Similarity=0.358 Sum_probs=163.9
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCC---CCCCCcceeEEEEeCCe-----
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSV---KNRNLVPLLGFCMAKKE----- 374 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 374 (623)
|+..+.||+|+||.||+|+.+ +++.+++|++..... ....+.+|+.++.++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566789999999999999976 489999999964321 234566677665544 69999999999988776
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++++||+++ +|.+++.... ...+++..++.++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999975 8999886432 23589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
........ .....++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 155 ~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~ 209 (287)
T cd07838 155 RIYSFEMA-----LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGT 209 (287)
T ss_pred eeccCCcc-----cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCC
Confidence 87643221 11223678899999999888999999999999999999999998753
No 327
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.9e-32 Score=281.77 Aligned_cols=194 Identities=23% Similarity=0.350 Sum_probs=163.6
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------ 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 373 (623)
.++|...+.||+|+||.||+|.. .++..||+|++.... .....+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 36788899999999999999995 468999999986532 22456789999999999999999999987543
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++|+||+.. +|.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 45899999964 7777652 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 164 ARHADAEM-------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred CcCCCCCC-------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 98653211 12246788999999876 46889999999999999999999999753
No 328
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2e-32 Score=275.08 Aligned_cols=249 Identities=20% Similarity=0.266 Sum_probs=187.2
Q ss_pred cCcccceeeccCccEEEEEEeCC-CcEEEEEEeccc------cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDS------QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 378 (623)
+|...+.||+|+||.||++.... +..+++|.++.. ......+..|+.++++++|||++++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 46778899999999999998643 344555555431 12334567899999999999999999999988899999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++++|.+++.........+++..++.++.|++.|+.|||+. +++|+||+|+||++++ +.++|+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998865433446799999999999999999999998 9999999999999986 569999999998764
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
..... .....++..|+|||+.....++.++|+||||+++|+|++|..||..... ......... ..
T Consensus 157 ~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~~-- 221 (260)
T cd08222 157 GSCDL----ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--------LSVVLRIVE-GP-- 221 (260)
T ss_pred CCccc----ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHc-CC--
Confidence 32211 1123478899999999888889999999999999999999999863211 111111111 00
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.+.+ ....+. .+..++.+|+. .+|++||++.|+++
T Consensus 222 ---~~~~-~~~~~~---~~~~li~~~l~-~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 ---TPSL-PETYSR---QLNSIMQSMLN-KDPSLRPSAAEILR 256 (260)
T ss_pred ---CCCC-cchhcH---HHHHHHHHHhc-CChhhCcCHHHHhh
Confidence 0000 011222 33445556666 89999999999975
No 329
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.2e-32 Score=280.18 Aligned_cols=201 Identities=26% Similarity=0.333 Sum_probs=167.1
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeC--CeeeE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KERLL 377 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 377 (623)
.++|...+.||+|+||.||+|... +|..||+|.+..... ....+.+|++++.+++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 356888999999999999999964 689999999864321 233566899999999999999999998765 45789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|+||+.+ +|.+++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||++...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999975 888888543 25689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 458 NPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 458 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
...... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||....
T Consensus 159 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~ 213 (309)
T cd07845 159 GLPAKP----MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS 213 (309)
T ss_pred CCccCC----CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 542211 112235778999998865 457899999999999999999999997543
No 330
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=7.7e-32 Score=281.73 Aligned_cols=203 Identities=23% Similarity=0.355 Sum_probs=166.8
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC--Ceee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK--KERL 376 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~~ 376 (623)
.++|...+.||+|+||.||+|... ++..+++|++... ......+.+|+.++.++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456888899999999999999965 5788999988542 22345577899999999 999999999998654 3578
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||++ ++|.+++.. ..++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 86 lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 86 LVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 9999997 599998852 2678999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCcc-cccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 457 MNPIDTHL-STFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 457 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
........ ........++..|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~ 217 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS 217 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 64322110 011122347889999998754 457889999999999999999999996543
No 331
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.2e-32 Score=283.48 Aligned_cols=199 Identities=24% Similarity=0.246 Sum_probs=161.3
Q ss_pred ceeecc--CccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSG--RTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
..||+| +||+||+++. .+++.||+|.+.... ...+.+.+|+.++..++||||+++++++...+..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 8999999996 478999999986533 2346688899999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|++.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999986542 24588999999999999999999998 99999999999999999999999998654332211110
Q ss_pred cc---cccCCCCcccccCcccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 465 ST---FVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 465 ~~---~~~~~~gt~~y~aPE~~~~~--~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.. ......++..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 00 00111245679999998763 4789999999999999999999999754
No 332
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.5e-32 Score=278.97 Aligned_cols=251 Identities=22% Similarity=0.360 Sum_probs=186.9
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++|...+.||+|++|.||+|...+ ++.|++|.++... .....+..|+.++.+. .||||+++++++.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 457778999999999999999875 8899999987543 2345566777766666 49999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++ ++.+++... ...+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.++|+|||++..+...
T Consensus 95 ~~~~-~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 95 LMST-CLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ccCc-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9854 777776432 246899999999999999999999732 8999999999999999999999999999765432
Q ss_pred CCcccccccCCCCcccccCcccccCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCc
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLV----ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQ 536 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~ 536 (623)
... ....++..|+|||++.+.. ++.++||||||+++|||++|+.||...... .+.........
T Consensus 169 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~- 235 (296)
T cd06618 169 KAK-----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEE- 235 (296)
T ss_pred Ccc-----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCC-
Confidence 211 1223678999999987553 788999999999999999999998642111 11111111110
Q ss_pred hhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 537 LQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 537 ~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...+-. .....++ +.+++.+|+. .+|++||++.++++.
T Consensus 236 ~~~~~~----~~~~~~~---l~~li~~~l~-~~p~~Rp~~~~il~~ 273 (296)
T cd06618 236 PPSLPP----NEGFSPD---FCSFVDLCLT-KDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCCC----CCCCCHH---HHHHHHHHcc-CChhhCCCHHHHhcC
Confidence 000000 0012333 4444556776 899999999999865
No 333
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4e-32 Score=277.93 Aligned_cols=242 Identities=23% Similarity=0.348 Sum_probs=187.9
Q ss_pred cceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 310 NNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
...||+|+||.||++.. .++..|++|++.... .....+.+|+.++++++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 35799999999999986 478899999885433 3455688999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++.. ..+++.....++.|++.|++|||+. +++|+||+|+||++++++.++|+|||++..........
T Consensus 105 ~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~--- 173 (292)
T cd06657 105 TDIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--- 173 (292)
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccc---
Confidence 998742 3578999999999999999999999 99999999999999999999999999987654321111
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhh-
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLV- 546 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~- 546 (623)
....++..|+|||+..+..++.++||||||+++|||++|..||......+ ........ ..+.+.
T Consensus 174 -~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~-----~~~~~~~~---------~~~~~~~ 238 (292)
T cd06657 174 -KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-----AMKMIRDN---------LPPKLKN 238 (292)
T ss_pred -cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhh---------CCcccCC
Confidence 12347889999999988888999999999999999999999986422110 01111100 000100
Q ss_pred cCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 547 AKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 547 ~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
......++..+ ...|+. .+|.+||++.++++
T Consensus 239 ~~~~~~~l~~l---i~~~l~-~~P~~R~~~~~ll~ 269 (292)
T cd06657 239 LHKVSPSLKGF---LDRLLV-RDPAQRATAAELLK 269 (292)
T ss_pred cccCCHHHHHH---HHHHHh-CCcccCcCHHHHhc
Confidence 01122333333 445665 88999999999887
No 334
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7e-32 Score=271.91 Aligned_cols=201 Identities=22% Similarity=0.329 Sum_probs=168.4
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc------cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--Cee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS------QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK--KER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 375 (623)
.+|...+.||+|+||.||+|.. .++..|++|.+... ......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999995 46889999987432 12345788999999999999999999998764 357
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++++|.+++.. ...+++.....++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 799999999999999853 23478899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.......... ......++..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 155 RIQTICMSGT-GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred ccccccccCc-cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 6543111111 11123478899999999888889999999999999999999999964
No 335
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-32 Score=274.91 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=188.2
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||.||++... ++..+++|.+.... .....+.+|++++.+++|||++++++.+......++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 48999999986543 2456788899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc---
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL--- 464 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~--- 464 (623)
.+++... ..+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++..........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9999632 3689999999999999999999999 99999999999999999999999999987643321100
Q ss_pred -cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhch
Q 006982 465 -STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDK 543 (623)
Q Consensus 465 -~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 543 (623)
........++..|+|||.......+.++||||||+++||+++|..||..... .......... .. ....
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~-~~-~~~~- 222 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--------EEIFQNILNG-KI-EWPE- 222 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcC-Cc-CCCc-
Confidence 0011223467899999999888889999999999999999999999964321 1111111110 00 0000
Q ss_pred hhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 544 CLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 544 ~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
......++ ..+...|+. .+|++|||+.++.+.|+
T Consensus 223 ---~~~~~~~~---~~~i~~~l~-~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 223 ---DVEVSDEA---IDLISKLLV-PDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ---cccCCHHH---HHHHHHHhc-CCHhhcCCCccHHHHhc
Confidence 00012333 344445665 88999999976666554
No 336
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.7e-31 Score=269.71 Aligned_cols=198 Identities=21% Similarity=0.263 Sum_probs=162.9
Q ss_pred HHHHHHhccCccccee--eccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCC-CCCCCCcceeEEEEeCC
Q 006982 298 SDLMKATNSFSKNNII--GSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGS-VKNRNLVPLLGFCMAKK 373 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~l--G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~ 373 (623)
.+.....++|...+.+ |+|+||.||++.. .++..+++|.+........ |+..... .+|||++++++++...+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 3444455666666666 9999999999995 4678899998865432211 1211111 27999999999999999
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeecc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFG 452 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfg 452 (623)
..++||||+++|+|.+++... ..++|..+..++.|+++|+.|||+. +++||||||+||+++.++ .++|+|||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 999999999999999999532 3789999999999999999999999 999999999999999988 99999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++...... ...++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 209 (267)
T PHA03390 156 LCKIIGTPS--------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209 (267)
T ss_pred cceecCCCc--------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 988654321 123788999999999888999999999999999999999999743
No 337
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.3e-31 Score=277.57 Aligned_cols=201 Identities=21% Similarity=0.289 Sum_probs=163.5
Q ss_pred cCcccceeeccCccEEEEEEeC-C--CcEEEEEEecccc---ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC----Ce
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-D--GTSLMVKRLQDSQ---RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK----KE 374 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~ 374 (623)
+|...+.||+|+||.||++... . +..||+|++.... ...+.+.+|++++.++ .||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3677889999999999999965 3 7789999886432 2345678899999999 599999999875432 34
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++++||+. ++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 678888886 689998852 35689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+.................|+..|+|||+..+ ..++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 8765322211111223458899999998765 46789999999999999999999998753
No 338
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=7.6e-32 Score=278.12 Aligned_cols=249 Identities=25% Similarity=0.341 Sum_probs=188.6
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
.|...+.||+|+||.||+|+.. ++..+++|.+... ......+.+|+++++.++|+|++++++++......++|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999964 6788999988532 1233567889999999999999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+. |++.+.+... ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 96 YCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred ccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 997 5888777432 24588999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
. ...++..|+|||++. ...++.++|||||||++|||++|+.||...... ......... ..
T Consensus 169 ~--------~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~-~~ 231 (308)
T cd06634 169 N--------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQN-ES 231 (308)
T ss_pred c--------cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--------HHHHHHhhc-CC
Confidence 1 123678999999874 356788999999999999999999998642211 111111000 00
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
+.........+ +..++.+|+. .+|++||++.+++..-....
T Consensus 232 -----~~~~~~~~~~~---~~~li~~cl~-~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 232 -----PALQSGHWSEY---FRNFVDSCLQ-KIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred -----CCcCcccccHH---HHHHHHHHhh-CCcccCCCHHHHhhCccccc
Confidence 00011112223 3344456766 89999999999987754433
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=7.3e-32 Score=275.40 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=192.0
Q ss_pred cCcccceeeccCccEEEEEEe----CCCcEEEEEEecccc-----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 306 SFSKNNIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
+|...+.||+|++|.||+++. .++..|++|.++... ...+.+..|++++.++ +|||++++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778999999999999884 357889999986432 2345688999999999 599999999999999999
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++||||+++|+|.+++.. ...+++.....++.|++++|.|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999999853 24588999999999999999999998 99999999999999999999999999988
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLV--ATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
......... .....++..|+|||...+.. .+.++||||||+++|||++|..||...... ....+.......
T Consensus 154 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~ 226 (288)
T cd05583 154 EFLAEEEER---AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILK 226 (288)
T ss_pred ccccccccc---cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHc
Confidence 654322111 11224788999999987654 788999999999999999999998642211 111111111111
Q ss_pred cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 534 TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 534 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
.. ... ......++. +++..|+. .+|++|||+.+|.+.|+.
T Consensus 227 ~~-------~~~-~~~~~~~l~---~li~~~l~-~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 SK-------PPF-PKTMSAEAR---DFIQKLLE-KDPKKRLGANGADEIKNH 266 (288)
T ss_pred cC-------CCC-CcccCHHHH---HHHHHHhc-CCHhhccCcchHHHHhcC
Confidence 00 000 011222333 34445665 999999999998887764
No 340
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.98 E-value=8.8e-32 Score=273.22 Aligned_cols=192 Identities=27% Similarity=0.374 Sum_probs=165.1
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||+||++... +|..+++|.+.... .....+..|++++++++|||++++++++...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 68899999986432 2244567899999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+....... .
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~-----~ 150 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-----K 150 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC-----c
Confidence 999864332 4689999999999999999999999 99999999999999999999999999997654311 1
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.....++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 12234778999999998888999999999999999999999999653
No 341
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=1.3e-31 Score=278.86 Aligned_cols=199 Identities=22% Similarity=0.360 Sum_probs=167.7
Q ss_pred HHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCe
Q 006982 300 LMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKE 374 (623)
Q Consensus 300 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 374 (623)
+...+++|...+.||+|+||.||++... ++..|++|++.... ...+.+..|++++.+++|||++++++++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456788999999999999999999854 78999999885432 234677889999999999999999999876 457
Q ss_pred eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccc
Q 006982 375 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLA 454 (623)
Q Consensus 375 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla 454 (623)
.++|+||+ +++|.+++.. ..+++.....++.|++.||.|||+. +|+||||+|+||++++++.++|+|||++
T Consensus 85 ~~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred EEEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccc
Confidence 88999998 5699988842 3577888889999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... ....++..|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 156 RIQDPQM-------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred cccCCCc-------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7543211 12246788999998765 56899999999999999999999999653
No 342
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-34 Score=273.15 Aligned_cols=199 Identities=24% Similarity=0.384 Sum_probs=176.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
-|.+.++||+|+||.||+|.++ .|..+|+|.+.-. ...+++.+|+.+|.+...|++|+++|.+......++|||||..
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 3667789999999999999865 6999999988643 3567889999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|++.+.+.. .++++++.....++...+.||.|||.. .-+|||||+.|||++-+|.+|++|||.|-.+...-
T Consensus 113 GSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--- 183 (502)
T KOG0574|consen 113 GSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--- 183 (502)
T ss_pred CcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH---
Confidence 999999864 347899999999999999999999998 88999999999999999999999999998764321
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
..-++..||+-|||||++..-.|..++||||+|+...||..|++||.+..
T Consensus 184 -AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH 233 (502)
T KOG0574|consen 184 -AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH 233 (502)
T ss_pred -HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc
Confidence 12345569999999999999999999999999999999999999998654
No 343
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=2.7e-32 Score=267.58 Aligned_cols=269 Identities=23% Similarity=0.362 Sum_probs=213.8
Q ss_pred CHHHHHHHhccCcccceeeccCccEEEEEEeC------CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeE
Q 006982 296 RLSDLMKATNSFSKNNIIGSGRTGTMYKALLE------DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLG 367 (623)
Q Consensus 296 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~ 367 (623)
++.++.....+++...++-+|.||.||+|.|. +.+.|.+|.++.. +.....+..|.-.+..+.|||+.++.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 45566666667888888999999999999654 3456778877653 344567888999999999999999999
Q ss_pred EEEeC-CeeeEEEecCCCCCHhhhccC----CCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC
Q 006982 368 FCMAK-KERLLVYKHMPNGSLYDLLHP----ADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 442 (623)
Q Consensus 368 ~~~~~-~~~~lV~e~~~~gsL~~~l~~----~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~ 442 (623)
++.+. ...+++|.++.-|+|..+|.. .....+.++-.+...++.|++.|++|||+. +++|.||.++|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 98765 466899999999999999962 122346678889999999999999999999 9999999999999999
Q ss_pred CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccccc
Q 006982 443 DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT-GERPTNVAKAPETFK 521 (623)
Q Consensus 443 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt-g~~P~~~~~~~~~~~ 521 (623)
...+||+|=.+++.+-+.+++ +..+....+..||+||.+....|+..+|||||||+||||+| |+.|+...++.|.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYh--cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm-- 507 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYH--CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM-- 507 (563)
T ss_pred heeEEeccchhccccCccccc--ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH--
Confidence 999999999999999887765 34455667899999999999999999999999999999998 9999875444322
Q ss_pred ccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 522 GNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 522 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
..-..+..++. +....++|+..+ +.|||+..|++||++++++.-|.+...
T Consensus 508 ------~~ylkdGyRla-------QP~NCPDeLf~v----MacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 508 ------EHYLKDGYRLA-------QPFNCPDELFTV----MACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ------HHHHhccceec-------CCCCCcHHHHHH----HHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 11111111111 122356666655 467778999999999999999988653
No 344
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=1.6e-31 Score=271.63 Aligned_cols=190 Identities=23% Similarity=0.296 Sum_probs=157.7
Q ss_pred eeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHH---HHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 312 IIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEM---ATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
+||+|+||.||++... +++.||+|.+.... .....+..|. +.+....|||++.+++++...+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 58899999886532 1122233343 34555689999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|.+++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~- 152 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-
Confidence 9999998853 24689999999999999999999998 999999999999999999999999999876533211
Q ss_pred ccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....|+..|+|||++.+. .++.++||||+|+++|||++|+.||...
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 153 -----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred -----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 123488999999998754 6889999999999999999999999754
No 345
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=1.4e-31 Score=273.56 Aligned_cols=198 Identities=22% Similarity=0.314 Sum_probs=167.0
Q ss_pred cCcccceeeccCccEEEEEEe----CCCcEEEEEEecccc-----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 306 SFSKNNIIGSGRTGTMYKALL----EDGTSLMVKRLQDSQ-----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
+|+..+.||+|+||.||++.. .+|..||+|++.... ...+.+.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 367788999999999999985 368899999986532 2345678899999999 589999999999998899
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+++++|.+++.. ...+++.....++.|++.||.|||+. +++||||+|+||++++++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999853 24578889999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCC--CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
........ ......|+..|+|||.+... .++.++||||||+++|||++|+.||..
T Consensus 154 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 154 EFHEDEVE---RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred eccccccc---ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 65432211 11123478899999998753 467899999999999999999999864
No 346
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=1.8e-31 Score=278.92 Aligned_cols=198 Identities=21% Similarity=0.333 Sum_probs=166.2
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----Cee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 375 (623)
++|...+.||+|+||.||++.. .++..|++|.+... ......+.+|+.++..++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 5688889999999999999995 46899999998653 23345677899999999999999999988654 347
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
++|+||+. ++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 85 YIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 89999996 689988853 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 157 TTSEKGD----FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred ccCCCcc----cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 7643221 1122346889999998764 46889999999999999999999999653
No 347
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.98 E-value=2.7e-31 Score=274.65 Aligned_cols=243 Identities=27% Similarity=0.360 Sum_probs=185.5
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
|...+.||+|+||.||+|+.. ++..|++|++.... .....+.+|++++++++|||++++++++.+....++|+||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 455678999999999999964 68889999986432 2235678899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
++ |++.+++... ...+++.++..++.|++.++.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 103 ~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~- 174 (313)
T cd06633 103 CL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA- 174 (313)
T ss_pred CC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCCC-
Confidence 96 5787777532 24689999999999999999999999 9999999999999999999999999998653221
Q ss_pred CcccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchh
Q 006982 462 THLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQ 538 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 538 (623)
....|+..|+|||++. ...++.++|||||||++|||++|..||...... .......... .
T Consensus 175 -------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~-~- 237 (313)
T cd06633 175 -------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQND-S- 237 (313)
T ss_pred -------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHhcC-C-
Confidence 1234788999999984 456888999999999999999999998653221 1111111100 0
Q ss_pred hhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 539 DAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 539 ~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+.......... +..+...|+. .+|.+||++.+++..
T Consensus 238 ----~~~~~~~~~~~---l~~li~~~l~-~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 ----PTLQSNEWTDS---FRGFVDYCLQ-KIPQERPASAELLRH 273 (313)
T ss_pred ----CCCCccccCHH---HHHHHHHHcc-CChhhCcCHHHHhcC
Confidence 00011112222 3344456776 899999999999854
No 348
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=3.3e-31 Score=277.54 Aligned_cols=196 Identities=26% Similarity=0.362 Sum_probs=166.2
Q ss_pred HhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-----
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK----- 373 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 373 (623)
..++|...+.||+|+||.||++.. .++..||+|++.... .....+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 456788999999999999999984 478999999986432 22356789999999999999999999987653
Q ss_pred -eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 374 -ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 374 -~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
..++|+||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 7799988842 4588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
++....... ....++..|+|||.+.+ ..++.++|+||+|+++||+++|+.||...
T Consensus 164 ~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 164 LARQTDSEM-------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred cccccccCc-------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 998654311 12236788999998875 45789999999999999999999999754
No 349
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=1.8e-31 Score=274.34 Aligned_cols=203 Identities=26% Similarity=0.343 Sum_probs=167.9
Q ss_pred HHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC----
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK---- 373 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 373 (623)
...++|+..+.||+|+||.||+|..+ +++.|++|+++... .....+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34567889999999999999999975 58899999986432 23456778999999999999999999987654
Q ss_pred ------eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 374 ------ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 374 ------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
..++|+||+++ ++.+.+... ...+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 68899999986 777776532 24689999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
|+|||++......... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 157 l~dfg~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~ 221 (302)
T cd07864 157 LADFGLARLYNSEESR---PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQAN 221 (302)
T ss_pred eCcccccccccCCccc---ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999876442211 1112235778999998764 45688999999999999999999999753
No 350
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.6e-32 Score=277.10 Aligned_cols=245 Identities=21% Similarity=0.330 Sum_probs=194.4
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
-|...+.||+|.|..|-.|++ -.|..||||++.+.. .+...+.+|++-|+.++|||||+++.+.......|+|+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 355567899999999999984 489999999997654 3456788999999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee-CCCCCeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL-DDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl-~~~~~~kl~Dfgla~~~~~~ 460 (623)
-.+|+|++++-+.. ..+.+....+++.||..|+.|+|.. +++||||||+||.+ .+-|-+||.|||++-...+.
T Consensus 99 GD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred cCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 99999999996543 4588889999999999999999999 89999999999866 67788999999999877653
Q ss_pred CCcccccccCCCCcccccCcccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVAT-PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. ..+.+|+..|-|||.+.+..|+ +++||||+|||||.++.|..||....+.+....
T Consensus 173 ~k-----L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm----------------- 230 (864)
T KOG4717|consen 173 KK-----LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM----------------- 230 (864)
T ss_pred ch-----hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh-----------------
Confidence 32 3344589999999999998886 589999999999999999999987665543211
Q ss_pred hhchhh-hcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 540 AIDKCL-VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 540 ~~d~~l-~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
++|-.. .......+-..+++. |+..||++|.+.+||+..
T Consensus 231 ImDCKYtvPshvS~eCrdLI~s----MLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 231 IMDCKYTVPSHVSKECRDLIQS----MLVRDPKKRASLEEIVST 270 (864)
T ss_pred hhcccccCchhhhHHHHHHHHH----HHhcCchhhccHHHHhcc
Confidence 111111 111122333333332 223789999998887653
No 351
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=2.5e-31 Score=270.25 Aligned_cols=198 Identities=23% Similarity=0.321 Sum_probs=168.9
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
|...+.||+|++|.||++... +++.+++|.+..... ....+.+|++++++++|+|++++++++......++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456788999999999999965 688999999865432 3567888999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
++ ++.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||++++++.++|+|||.+........
T Consensus 81 ~~-~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 81 DT-DLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred CC-CHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 75 888888542 24689999999999999999999999 999999999999999999999999999987654321
Q ss_pred cccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
. .....++..|+|||.+.+. .++.++||||||+++|+|++|+.||....
T Consensus 154 ~----~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~ 203 (283)
T cd05118 154 P----YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS 203 (283)
T ss_pred c----ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 1123467889999998776 78999999999999999999999996543
No 352
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=6.3e-32 Score=274.54 Aligned_cols=198 Identities=26% Similarity=0.349 Sum_probs=168.7
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
|+..+.||+|++|.||+|+.. +++.+++|.+... ....+.+..|++++++++|+|++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455678999999999999966 5899999998764 233467788999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
+ ++|.+++.... ..+++..+..++.+++.||+|||+. +|+||||+|+||++++++.++|+|||+++.......
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 59999996432 4689999999999999999999999 999999999999999999999999999986543221
Q ss_pred cccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
. .....++..|+|||.+.+. .++.++||||||+++|||++|+.||....
T Consensus 154 ~----~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 203 (282)
T cd07829 154 T----YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS 203 (282)
T ss_pred c----cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 1 1122356789999998766 78999999999999999999999987543
No 353
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=289.09 Aligned_cols=201 Identities=25% Similarity=0.384 Sum_probs=172.2
Q ss_pred CcccceeeccCccEEEEEE-eCCCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------eeeE
Q 006982 307 FSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------ERLL 377 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~l 377 (623)
+...+.||+|+||.||+|+ .+.|..||||.++.. ....+...+|+++|++++|+|||++++.-++.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3446789999999999999 568999999999764 345677889999999999999999999865543 5679
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC--CCC--CeEEeeccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD--DDF--EPKISDFGL 453 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~--~~~--~~kl~Dfgl 453 (623)
|||||.+|||...|....+ ...+++.+.+.+..+++.||.|||+. +|+||||||.||++- .+| .-||+|||.
T Consensus 95 vmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999987654 46699999999999999999999998 999999999999984 323 469999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCccccc-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
|+.++... .+...+||..|.+||... ...|+..+|.|||||++||..||..||.....
T Consensus 171 Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 171 ARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred cccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 99886543 233456999999999998 58899999999999999999999999975433
No 354
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=2.9e-32 Score=283.40 Aligned_cols=201 Identities=23% Similarity=0.348 Sum_probs=175.7
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc---cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR---SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
...|.....||+|.|+.|..|++. .+..||+|.+.++.. ....+.+|+++|..++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 456788899999999999999965 689999999987653 2345889999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||+.+|.+++++... ..+....+..++.|+.++++|+|++ .|+|||||++|||++.+.++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~----gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH----GRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EeccCchhHHHHHhc----ccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 999999999999643 3455577888999999999999999 999999999999999999999999999998764
Q ss_pred CCCcccccccCCCCcccccCcccccCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVA-TPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
. ....+.+|++.|.|||++.+..| .+++|+||+|+++|-|+.|..||++...
T Consensus 208 ~-----~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l 260 (596)
T KOG0586|consen 208 G-----LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL 260 (596)
T ss_pred c-----ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc
Confidence 2 23344569999999999998776 5799999999999999999999986433
No 355
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-32 Score=259.12 Aligned_cols=269 Identities=19% Similarity=0.282 Sum_probs=198.9
Q ss_pred cCHHHHHHHhccCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc-ccHHHHHHHHHHhCCC-CCCCCcceeEEEEe
Q 006982 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSV-KNRNLVPLLGFCMA 371 (623)
Q Consensus 295 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 371 (623)
.++.|+.+.| .+.||+|+|+.|..++ ..+|.++|||++.+.. ....+..+|++++.+. .|+||+.+++||++
T Consensus 73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3567777776 5889999999999988 7789999999997654 4567888999999988 59999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEE
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKI 448 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl 448 (623)
+...|+|||-|.||+|..+++. ...+++..+-++..+||.||.|||.+ +|+|||+||+|||..+-.. +||
T Consensus 148 d~~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred cceEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 9999999999999999999973 45689999999999999999999999 9999999999999976554 799
Q ss_pred eecccccccCC--CCCc-ccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccc-
Q 006982 449 SDFGLARLMNP--IDTH-LSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPET- 519 (623)
Q Consensus 449 ~Dfgla~~~~~--~~~~-~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~- 519 (623)
+||.+..-+.. .... ......+.+|+..|||||+.. ...|+.++|.||+|||||-|++|..||.+....+-
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 99988754321 1111 111233467899999999763 34688999999999999999999999976433221
Q ss_pred cc-ccHHHHHHHHhcc---CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 520 FK-GNLVEWIAQLSST---GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 520 ~~-~~l~~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+. +..-....+.+.+ +.-.++-|+.|.. ..++..+++...+. .+|.+|-++.+|+.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah--IS~eakdlisnLlv----rda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH--ISSEAKDLISNLLV----RDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHH--hhHHHHHHHHHHHh----ccHHhhhhhhhccC
Confidence 11 1111111111110 1112333333322 34445555544443 66888888887765
No 356
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.1e-32 Score=301.71 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=180.3
Q ss_pred HHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc--cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS--QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK----- 372 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 372 (623)
.+-..+|+..++||+||||.|||++.+ ||+.||||++.-. ......+.+|+..+++++|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 345578899999999999999999955 9999999999765 34456688999999999999999887322100
Q ss_pred --------------------------------------------------------------------------------
Q 006982 373 -------------------------------------------------------------------------------- 372 (623)
Q Consensus 373 -------------------------------------------------------------------------------- 372 (623)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeeeEEEecCCCCCHhhhccCCCCCCCcc-ChHHHHHHHHHHHHHH
Q 006982 373 ----------------------------------KERLLVYKHMPNGSLYDLLHPADDTGKSV-DWPRRLKIAIGAARGF 417 (623)
Q Consensus 373 ----------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l-~~~~~~~i~~~ia~~l 417 (623)
...||-||||+.-++.++++... .. .-...++++.+|++||
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~----~~~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH----FNSQRDEAWRLFREILEGL 710 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc----cchhhHHHHHHHHHHHHHH
Confidence 01357788888877777775322 11 3567789999999999
Q ss_pred HHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC----C---CC-------CcccccccCCCCcccccCcccc
Q 006982 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN----P---ID-------THLSTFVNGEFGDLGYVAPEYA 483 (623)
Q Consensus 418 ~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~----~---~~-------~~~~~~~~~~~gt~~y~aPE~~ 483 (623)
+|+|++ +||||||||.||++|++..+||+|||+|+... . .. ........+.+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 0 00 0001112345799999999999
Q ss_pred cCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh---hhchhhhcCCCHHHHHHH
Q 006982 484 RTL---VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD---AIDKCLVAKGVDNELFQF 557 (623)
Q Consensus 484 ~~~---~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~d~~l~~~~~~~~~~~~ 557 (623)
.+. .|+.|+|+||+|||++||+. ||..... + ..+-..++.+.+.. +.++. ..+-.++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME----R----a~iL~~LR~g~iP~~~~f~~~~------~~~e~sl 850 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME----R----ASILTNLRKGSIPEPADFFDPE------HPEEASL 850 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHH----H----HHHHHhcccCCCCCCccccccc------chHHHHH
Confidence 765 49999999999999999996 6653211 1 11111122222211 12211 1112223
Q ss_pred HHHHhhccCCCCCCCCCCHHHHHH
Q 006982 558 LKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 558 ~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
+.|+.++||.+|||+.|++.
T Consensus 851 ----I~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 851 ----IRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ----HHHHhcCCCccCCCHHHHhh
Confidence 34455599999999999874
No 357
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.8e-32 Score=277.51 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=193.1
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc---ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEe
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 380 (623)
..|++.+.||+||.+.||++...+.+.+|+|++.... .....|.+|+..|.++ .|.+|+.+++|-..++..|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 4688889999999999999999988999998886543 3456799999999999 58999999999999999999999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|-+ .+|..+|..... ...+| .+..+..|++.++.+.|.+ ||||.||||.|+|+-+ |.+||+|||+|..+.+.
T Consensus 441 ~Gd-~DL~kiL~k~~~--~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKS--IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPD 512 (677)
T ss_pred ccc-ccHHHHHHhccC--CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCcc
Confidence 885 499999976543 34445 6788999999999999999 9999999999999876 57999999999988764
Q ss_pred CCcccccccCCCCcccccCcccccCC-----------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHH
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTL-----------VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA 529 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~ 529 (623)
.+. ..-...+||+-||+||.+... +.+.++||||+|||||+|+.|+.||... ...|.
T Consensus 513 TTs--I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---------~n~~a- 580 (677)
T KOG0596|consen 513 TTS--IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---------INQIA- 580 (677)
T ss_pred ccc--eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH---------HHHHH-
Confidence 332 333456799999999988532 3567999999999999999999999631 11111
Q ss_pred HHhccCchhhhhchhhhcCC-CHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 530 QLSSTGQLQDAIDKCLVAKG-VDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 530 ~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
++..+.|+--.-.+ ...+-..++.++..|+. .||++||+..|+++
T Consensus 581 ------Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~-rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 ------KLHAITDPNHEIEFPDIPENDELIDVMKCCLA-RDPKKRWSIPELLQ 626 (677)
T ss_pred ------HHHhhcCCCccccccCCCCchHHHHHHHHHHh-cCcccCCCcHHHhc
Confidence 22233333211011 01111125555556665 99999999999876
No 358
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.6e-31 Score=268.43 Aligned_cols=243 Identities=21% Similarity=0.214 Sum_probs=180.8
Q ss_pred ceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHH-hCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 311 NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMAT-LGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
+.||+|+||.||+|... +++.||+|.+..... ....+..|..+ ....+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999864 688999999865321 12234445444 4556899999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+++.....
T Consensus 82 ~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 150 (260)
T cd05611 82 GDCASLIKTL----GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN---- 150 (260)
T ss_pred CCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccc----
Confidence 9999999532 4578899999999999999999998 9999999999999999999999999998754321
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
....++..|+|||...+..++.++||||||+++|||++|..||...... ......... ... .+.
T Consensus 151 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~---~~~ 214 (260)
T cd05611 151 ----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFDNILSR-RIN---WPE 214 (260)
T ss_pred ----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhc-ccC---CCC
Confidence 1223678899999998888899999999999999999999999643221 111111000 000 000
Q ss_pred hhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 006982 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 584 (623)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~ 584 (623)
-.....+.+ +..++..|+. .+|++||++.++.+.|.
T Consensus 215 ~~~~~~~~~---~~~~i~~~l~-~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 215 EVKEFCSPE---AVDLINRLLC-MDPAKRLGANGYQEIKS 250 (260)
T ss_pred cccccCCHH---HHHHHHHHcc-CCHHHccCCCcHHHHHc
Confidence 000012233 3444456666 89999998766655443
No 359
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=7.4e-31 Score=275.14 Aligned_cols=202 Identities=24% Similarity=0.354 Sum_probs=169.2
Q ss_pred HHHHHHHhccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC
Q 006982 297 LSDLMKATNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK 372 (623)
Q Consensus 297 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 372 (623)
..++...+++|...+.||+|+||.||++.. .++..||+|++.... ...+.+.+|++++.+++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 456677788999999999999999999985 578899999986532 2245678899999999999999999988643
Q ss_pred ------CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCe
Q 006982 373 ------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEP 446 (623)
Q Consensus 373 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~ 446 (623)
...+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 2356777776 7899988842 3589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
||+|||+++...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 160 kl~dfg~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 221 (345)
T cd07877 160 KILDFGLARHTDDEM-------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 221 (345)
T ss_pred EEecccccccccccc-------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999998643211 12346889999998865 46788999999999999999999999653
No 360
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1e-31 Score=272.60 Aligned_cols=203 Identities=25% Similarity=0.378 Sum_probs=173.5
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 378 (623)
++|...+.||+|++|.||++... ++..|++|++... ....+.+..|.+++.+++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36778899999999999999965 7899999998653 233466888999999998 99999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+++++|.+++.. ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999963 24699999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccc----------------ccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLS----------------TFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~----------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
....... .......++..|+|||......++.++||||||++++|+++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS 225 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 3221100 1112234688999999998888999999999999999999999999753
No 361
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=2.2e-31 Score=278.79 Aligned_cols=201 Identities=20% Similarity=0.339 Sum_probs=164.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC----------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK---------- 372 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------- 372 (623)
.+|...+.||+|+||.||+|... ++..|++|.+.... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57888999999999999999964 68899999885543 3456788999999999999999999876543
Q ss_pred ----CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeE
Q 006982 373 ----KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPK 447 (623)
Q Consensus 373 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~k 447 (623)
...++|+||++ ++|.+++. ...+++.....++.|++.||.|||+. +|+||||||+||+++ +++.++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEE
Confidence 34689999997 59988884 23588999999999999999999999 999999999999997 556789
Q ss_pred EeecccccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 448 ISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
++|||+++......... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||....
T Consensus 156 l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~ 223 (342)
T cd07854 156 IGDFGLARIVDPHYSHK-GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH 223 (342)
T ss_pred ECCcccceecCCccccc-cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999998654321111 11122346888999997654 567889999999999999999999997543
No 362
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.3e-31 Score=276.27 Aligned_cols=205 Identities=23% Similarity=0.297 Sum_probs=165.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC------
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK------ 373 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 373 (623)
.++|...+.||+|+||.||+|... +++.+++|++.... .....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888999999999999999965 68899999885432 22345678999999999999999999875543
Q ss_pred --eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 374 --ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 374 --~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
..++|+||+.+ ++...+... ...+++..+..++.|+++||+|||+. +|+|+||||+||++++++.++|+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 35899999975 777776532 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccc-------ccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 452 GLARLMNPIDTHLS-------TFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 452 gla~~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
|+++.......... .......+++.|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~ 231 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS 231 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC
Confidence 99986543211111 01112246788999998765 457899999999999999999999997543
No 363
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=2.9e-31 Score=277.11 Aligned_cols=203 Identities=22% Similarity=0.255 Sum_probs=165.6
Q ss_pred ccCc-ccceeeccCccEEEEEEeC-CCcEEEEEEecccccc---------------HHHHHHHHHHhCCCCCCCCcceeE
Q 006982 305 NSFS-KNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRS---------------EKEFVAEMATLGSVKNRNLVPLLG 367 (623)
Q Consensus 305 ~~f~-~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------------~~~~~~e~~~l~~l~h~niv~l~~ 367 (623)
++|. ..+.||+|+||.||+|... +++.||+|.+...... ...+.+|++++.+++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 3577999999999999954 6899999988643221 124678999999999999999999
Q ss_pred EEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 368 FCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 368 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
++...+..++|+||++ |+|.+++.. ...+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 699999853 34588999999999999999999998 999999999999999999999
Q ss_pred EeecccccccCCCCCc----------ccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 448 ISDFGLARLMNPIDTH----------LSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 448 l~Dfgla~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
|+|||+++........ .........++..|+|||++.+. .++.++||||||+++|||++|+.||....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999865411100 00111123467889999998764 46899999999999999999999997543
No 364
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-32 Score=261.80 Aligned_cols=199 Identities=21% Similarity=0.246 Sum_probs=174.4
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|...++||+|.||.|-.++ ...++.+|+|++++... ....-..|-++|...+||.+..+...|+.++..++||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 568888999999999999998 45789999999987542 2344567899999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
||..||.|+-+|.. ...+++.....+-..|..||.|||++ +|+.||||.+|.|+|++|++||+|||+++.--.
T Consensus 248 eyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 248 EYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999999953 45688888888999999999999999 999999999999999999999999999986433
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .+-+||+.|+|||++....|...+|.|.+|||+|||+.|+.||+..
T Consensus 321 ~g~t~----kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 321 YGDTT----KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred cccee----ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 22222 3345999999999999999999999999999999999999999863
No 365
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=3.3e-31 Score=276.09 Aligned_cols=201 Identities=23% Similarity=0.352 Sum_probs=170.7
Q ss_pred cCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC-----eee
Q 006982 306 SFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK-----ERL 376 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 376 (623)
+|...+.||+|++|.||+|+.. ++..+++|++.... ...+.+.+|++++++++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4777899999999999999965 48899999987542 34567889999999999999999999988765 789
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|+||++ ++|.+++.. ...+++..++.++.+++.||+|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 81 lv~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999998 489998853 23789999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
....... ........++..|+|||++.+. .++.++||||||+++|||++|+.||....
T Consensus 153 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~ 211 (330)
T cd07834 153 VDPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD 211 (330)
T ss_pred ecccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC
Confidence 6543211 0112223478889999999877 78999999999999999999999997654
No 366
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-33 Score=307.64 Aligned_cols=203 Identities=30% Similarity=0.416 Sum_probs=173.2
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
+-++.....||.|.||.||.|. ..+|.-.|+|-++-. ....+...+|+.++..++|||+|+.+|+-.+++..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 3456777899999999999998 567888899977532 234456789999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
|||++|+|.+.+.. +...++.....+..|++.|++|||++ ||+||||||.||+++.+|.+|++|||.|..+..
T Consensus 1314 EyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 99999999999963 34456666677889999999999999 999999999999999999999999999998876
Q ss_pred CCCcccccccCCCCcccccCcccccCCC---CCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLV---ATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
..........+..||+-|||||++.+.. -..+.||||+|||++||+||++||..
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~ 1443 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAE 1443 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhh
Confidence 5333344556778999999999997643 34589999999999999999999974
No 367
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=3.1e-31 Score=277.77 Aligned_cols=195 Identities=25% Similarity=0.369 Sum_probs=165.8
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCe-----
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKE----- 374 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 374 (623)
.++|...+.||+|++|.||+|... ++..|++|++.... ...+.+.+|+.++++++|||++++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 567888999999999999999975 57899999986532 233567789999999999999999998766554
Q ss_pred -eeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 375 -RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 375 -~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccc
Confidence 78999998 6699999852 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+...... .....++..|+|||.+.+ ..++.++||||||+++||+++|+.||...
T Consensus 165 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 165 ARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred ccccccc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9865432 112246788999998865 36789999999999999999999999754
No 368
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=301.19 Aligned_cols=214 Identities=22% Similarity=0.246 Sum_probs=183.9
Q ss_pred HHHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc----cccHHHHHHHHHHhCCCCCCCCcceeEEEEe
Q 006982 297 LSDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS----QRSEKEFVAEMATLGSVKNRNLVPLLGFCMA 371 (623)
Q Consensus 297 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 371 (623)
+.++....++|.+.++||+|+||.|..++++ .++.||+|++.+. +....-|..|-++|.--+.+.|+.++..|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4556666789999999999999999999975 5788999999763 2334568889999988899999999999999
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeec
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDF 451 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Df 451 (623)
..+.|+|||||+||+|-.++... ..+++..+..++..|+.||.-||+. |+|||||||.|||+|..|++||+||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccc
Confidence 99999999999999999999533 2588888888999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccc
Q 006982 452 GLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF 520 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~ 520 (623)
|-+..+...+.. .+...+|||.|++||++.. +.|...+|.||+||++|||+.|..||+.....+++
T Consensus 220 GsClkm~~dG~V---~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY 290 (1317)
T KOG0612|consen 220 GSCLKMDADGTV---RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETY 290 (1317)
T ss_pred hhHHhcCCCCcE---EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHH
Confidence 999888754432 2345579999999999852 57889999999999999999999999875554443
No 369
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=280.24 Aligned_cols=248 Identities=19% Similarity=0.336 Sum_probs=188.3
Q ss_pred CcccceeeccCccEEEEEEeCCCcE-EEEEEeccc-cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGTS-LMVKRLQDS-QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~~-vavK~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
|.+...||.|+||.||+|..++... .|.|++... ......|.-||++|....||+||++++.|+..+..++..|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4556779999999999999765443 456666443 34557899999999999999999999999999999999999999
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|-+...+-. .+..+.+.++..++++++.||.|||++ .|||||||+.|||++-+|.++|+|||.+-........
T Consensus 114 GAVDaimlE---L~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk- 186 (1187)
T KOG0579|consen 114 GAVDAIMLE---LGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK- 186 (1187)
T ss_pred chHhHHHHH---hccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHhh-
Confidence 999998743 357899999999999999999999999 9999999999999999999999999998654321111
Q ss_pred cccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 465 STFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
-+.-.||+.|||||+.. ..+|+.++||||||+.|.||..+.+|-..... ++-.++....+++ -
T Consensus 187 ---RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-------MRVllKiaKSePP--T 254 (1187)
T KOG0579|consen 187 ---RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSEPP--T 254 (1187)
T ss_pred ---hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-------HHHHHHHhhcCCC--c
Confidence 12335999999999864 56899999999999999999999988653221 1111111111111 1
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
++ ...........++ ..|+. .+|..||+++++++
T Consensus 255 Ll----qPS~Ws~~F~DfL---k~cL~-Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 LL----QPSHWSRSFSDFL---KRCLV-KNPRNRPPAAQLLK 288 (1187)
T ss_pred cc----CcchhhhHHHHHH---HHHHh-cCCccCCCHHHHhh
Confidence 11 1112223333444 45666 88999999999875
No 370
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=249.95 Aligned_cols=246 Identities=21% Similarity=0.359 Sum_probs=185.5
Q ss_pred ccceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCCC
Q 006982 309 KNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMPN 384 (623)
Q Consensus 309 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 384 (623)
....||+|..|.|+++..+ .|..+|||.+.... ...+++...++++.+- ..|.||+.+|||..+...++.||.|.-
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~ 175 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST 175 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence 3467999999999999965 58899999997654 4456788888886655 479999999999999999999999853
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
.+..++.... +++++.-.-++...+..||.||.+++ +|+|||+||+|||+|+.|++|++|||++-++.....+.
T Consensus 176 -C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht 249 (391)
T KOG0983|consen 176 -CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT 249 (391)
T ss_pred -HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence 4555554322 45777778889999999999999886 99999999999999999999999999998775533332
Q ss_pred cccccCCCCcccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhh
Q 006982 465 STFVNGEFGDLGYVAPEYART---LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAI 541 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (623)
...|-+.|||||.+.. ..|+.++||||||+.++|+.||..||....... +.......+.
T Consensus 250 -----rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-------e~ltkvln~e------ 311 (391)
T KOG0983|consen 250 -----RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF-------EVLTKVLNEE------ 311 (391)
T ss_pred -----cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH-------HHHHHHHhcC------
Confidence 2237789999999864 468899999999999999999999998654321 1111111111
Q ss_pred chhhhcC-CCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAK-GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~-~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
-++|... +.... +.+....|+. .|+.+||...++++.
T Consensus 312 PP~L~~~~gFSp~---F~~fv~~CL~-kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 PPLLPGHMGFSPD---FQSFVKDCLT-KDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCcccCcCHH---HHHHHHHHhh-cCcccCcchHHHhcC
Confidence 1333321 12333 3444456776 999999998887653
No 371
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1.4e-30 Score=294.16 Aligned_cols=144 Identities=24% Similarity=0.314 Sum_probs=129.4
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
++|.+.+.||+|+||.||+|... ++..||+|++.... .....+..|+.++..++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56888899999999999999966 68899999986532 22356888999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
||+++++|.+++... ..+++..++.++.|++.||.|||.. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~----~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY----GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999632 4578889999999999999999998 99999999999999999999999999986
No 372
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.5e-30 Score=259.50 Aligned_cols=190 Identities=25% Similarity=0.322 Sum_probs=165.7
Q ss_pred eeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 313 IGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
||+|+||.||++... +++.+++|.+..... ....+..|++++++++|||++++++.+......++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999965 588999999865432 345788999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
.+++... ..+++.....++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++........ .
T Consensus 81 ~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~----~ 149 (250)
T cd05123 81 FSHLSKE----GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS----R 149 (250)
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCC----c
Confidence 9999632 3589999999999999999999998 999999999999999999999999999987643211 1
Q ss_pred ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 468 VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
.....++..|+|||...+...+.++|+||||+++||+++|..||..
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~ 195 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYA 195 (250)
T ss_pred ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 1223478899999999888889999999999999999999999964
No 373
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=252.63 Aligned_cols=253 Identities=20% Similarity=0.249 Sum_probs=191.4
Q ss_pred hccCccc-ceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeC----Ceee
Q 006982 304 TNSFSKN-NIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAK----KERL 376 (623)
Q Consensus 304 ~~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~~~ 376 (623)
+++|++. ++||-|-.|.|-.+.++ ++..+|+|++.++..+ .+|++..-.. .|||||.+++++.+. .-.+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KA----RrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKA----RREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHH----HhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 3445443 68999999999998854 7889999999776644 3566653333 799999999998653 3457
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC---CCCCeEEeeccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFGL 453 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~---~~~~~kl~Dfgl 453 (623)
+|||.|+||.|+..++.... ..+++.++-.|..||+.|+.|||+. .|+||||||+|+|.+ .+..+||+|||+
T Consensus 136 iVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccccc
Confidence 99999999999999976543 6799999999999999999999999 999999999999996 466799999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhc
Q 006982 454 ARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSS 533 (623)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~ 533 (623)
|+.-... ....+.+-|+.|.|||++...+|+..+|+||+||++|-|+.|..||+..... .....+...+....
T Consensus 211 AK~t~~~-----~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-aispgMk~rI~~gq- 283 (400)
T KOG0604|consen 211 AKETQEP-----GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKRRIRTGQ- 283 (400)
T ss_pred ccccCCC-----ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-cCChhHHhHhhccC-
Confidence 9975431 1223344689999999999999999999999999999999999999875442 11112222222111
Q ss_pred cCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 534 TGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 534 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.++-++.| .++.+..+-.++|++..+|++|.|+.|+...
T Consensus 284 ----y~FP~pEW------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 284 ----YEFPEPEW------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ----ccCCChhH------hHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11222221 2344455556677777999999999998764
No 374
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=3e-31 Score=253.37 Aligned_cols=205 Identities=24% Similarity=0.334 Sum_probs=169.2
Q ss_pred ccCcccceeeccCccEEEEEEeCC-----CcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-----GTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKER 375 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 375 (623)
..|+....||+|.||.||+|...+ ...+|+|+++... .-.....+|+..++.++|||++.+..++.+ +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 357888999999999999997432 2368999997653 223467789999999999999999999887 6678
Q ss_pred eEEEecCCCCCHhhhccCCCC-CCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC----CCeEEee
Q 006982 376 LLVYKHMPNGSLYDLLHPADD-TGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD----FEPKISD 450 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~----~~~kl~D 450 (623)
++++||.+. +|...++-.+. ....++......|+.||..|+.|||+. =|.||||||.|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999987 99888864432 236788889999999999999999999 69999999999999877 9999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+|+++.....-... ...++.+-|..|+|||++.+. .||.+.|||+.|||..||+|-.+-|...
T Consensus 180 lGlaR~~~~plkpl-~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 180 LGLARLFNNPLKPL-ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred ccHHHHhhcccccc-ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 99999876533222 123445578999999998764 6999999999999999999988887653
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=6.4e-30 Score=253.45 Aligned_cols=180 Identities=23% Similarity=0.287 Sum_probs=153.0
Q ss_pred cCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCC
Q 006982 316 GRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPA 394 (623)
Q Consensus 316 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~ 394 (623)
|.+|.||++.. .+++.+++|++.... .+..|...+....|||++++++++.+.+..++||||+++|+|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 88999999995 468899999986543 2334555555667999999999999999999999999999999998532
Q ss_pred CCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCc
Q 006982 395 DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGD 474 (623)
Q Consensus 395 ~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt 474 (623)
..+++.....++.|++.||.|||+. +|+||||||+||+++.++.++++|||.+....... .+..++
T Consensus 80 ----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------~~~~~~ 145 (237)
T cd05576 80 ----LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------DGEAVE 145 (237)
T ss_pred ----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-------ccCCcC
Confidence 3589999999999999999999998 99999999999999999999999999887654311 122356
Q ss_pred ccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 475 LGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 475 ~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
..|+|||......++.++||||+|+++|||++|+.|+..
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 789999999888889999999999999999999988753
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.8e-30 Score=273.45 Aligned_cols=209 Identities=25% Similarity=0.401 Sum_probs=181.4
Q ss_pred HHHHHHhccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEe----
Q 006982 298 SDLMKATNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMA---- 371 (623)
Q Consensus 298 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 371 (623)
+.+...++.|.+.++||+|.+|.||+++ .++++.+|+|+........++.+.|.++++.. .|||++.++|++..
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 3344456778889999999999999999 56799999999988887788889999999888 69999999999864
Q ss_pred -CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEee
Q 006982 372 -KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISD 450 (623)
Q Consensus 372 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~D 450 (623)
+++.|||||||.+||..|+++.-. +..+.|.....|+..+++|+.+||.. .++|||||-.|||+++++.+|+.|
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEee
Confidence 467899999999999999997654 67899999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-----LVATPKGDVYSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DV~sfGvil~elltg~~P~~~~~ 515 (623)
||++..+...... -++..||+-|||||++.- ..|+.++|+||+|++..||--|.+|+.+..
T Consensus 167 FGvSaQldsT~gr----RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH 232 (953)
T KOG0587|consen 167 FGVSAQLDSTVGR----RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH 232 (953)
T ss_pred eeeeeeeeccccc----ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc
Confidence 9999877643222 233459999999999853 357789999999999999999999987644
No 377
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2e-29 Score=271.31 Aligned_cols=266 Identities=18% Similarity=0.215 Sum_probs=178.1
Q ss_pred HhccCcccceeeccCccEEEEEEe-----------------CCCcEEEEEEeccccc-cH--------------HHHHHH
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALL-----------------EDGTSLMVKRLQDSQR-SE--------------KEFVAE 350 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~-~~--------------~~~~~e 350 (623)
..++|...++||+|+||.||+|.. .+++.||||++..... .. +.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 356899999999999999999964 2456799999864321 11 223446
Q ss_pred HHHhCCCCCCCC-----cceeEEEEe--------CCeeeEEEecCCCCCHhhhccCCCC--------------------C
Q 006982 351 MATLGSVKNRNL-----VPLLGFCMA--------KKERLLVYKHMPNGSLYDLLHPADD--------------------T 397 (623)
Q Consensus 351 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~--------------------~ 397 (623)
+.++.+++|.++ ++++++|.. ....++||||+++|+|.++++.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766654 677787753 3567999999999999999874321 0
Q ss_pred CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccc
Q 006982 398 GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGY 477 (623)
Q Consensus 398 ~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y 477 (623)
...++|..+..++.|++.+|.|||+. +|+||||||+||+++.++.+||+|||+++......... . ....+++.|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~--~~g~~tp~Y 376 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-P--LYGMLDPRY 376 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-c--cccCCCcce
Confidence 12357888999999999999999999 99999999999999999999999999997654321111 1 111247899
Q ss_pred cCcccccCCCC----------------------CcchhHHHHHHHHHHHHhCCC-CCCCCCCc----ccccccHHHHHHH
Q 006982 478 VAPEYARTLVA----------------------TPKGDVYSFGTVLLELVTGER-PTNVAKAP----ETFKGNLVEWIAQ 530 (623)
Q Consensus 478 ~aPE~~~~~~~----------------------s~k~DV~sfGvil~elltg~~-P~~~~~~~----~~~~~~l~~~~~~ 530 (623)
+|||.+..... ..+.||||+||+++||++|.. |+...... ......+..|...
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~ 456 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY 456 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence 99998754221 235799999999999999875 66432110 0111223333221
Q ss_pred HhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 531 LSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 531 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.... .+-. ..+...+....++.-.+..-. .+|.+|+|++|+++.
T Consensus 457 ~~~~------~~~~-~~d~~s~~~~dLi~~LL~~~~-~~~~~RlSa~eaL~H 500 (507)
T PLN03224 457 KGQK------YDFS-LLDRNKEAGWDLACKLITKRD-QANRGRLSVGQALSH 500 (507)
T ss_pred cccC------CCcc-cccccChHHHHHHHHHhccCC-CCcccCCCHHHHhCC
Confidence 1000 0000 011234555555554443221 345799999999753
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-30 Score=271.01 Aligned_cols=240 Identities=20% Similarity=0.211 Sum_probs=185.5
Q ss_pred hccCcccceeeccCccEEEEEEe-CCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEec
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
++.|.....+|.|+|+.|-.+.. .+++..++|++.+.. ..-.+|+.++... .|||++++.+.+.+..+.|+|||.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 56777778899999999998884 468889999997652 2233567665555 799999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee-CCCCCeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL-DDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl-~~~~~~kl~Dfgla~~~~~~ 460 (623)
+.+|-+.+.+... +.+. ..+..|+.+++.++.|||++ |++||||||+|||+ ++.++++|+|||.++.....
T Consensus 398 l~g~ell~ri~~~----~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 398 LDGGELLRRIRSK----PEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred ccccHHHHHHHhc----chhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999988887532 2233 66778999999999999999 99999999999999 59999999999999987653
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDA 540 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 540 (623)
+.+.+-|..|.|||++....|++++|+||||++||||++|+.||...... ..+ ......+...
T Consensus 470 -------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei----~~~i~~~~~s-- 532 (612)
T KOG0603|consen 470 -------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEI----HTRIQMPKFS-- 532 (612)
T ss_pred -------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHH----HHhhcCCccc--
Confidence 22334588999999999999999999999999999999999999753221 011 1111111111
Q ss_pred hchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 541 IDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 541 ~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
+..+++...+++- +++.||.+||+|+++...
T Consensus 533 -------~~vS~~AKdLl~~----LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 533 -------ECVSDEAKDLLQQ----LLQVDPALRLGADEIGAH 563 (612)
T ss_pred -------cccCHHHHHHHHH----hccCChhhCcChhhhccC
Confidence 2244555555553 334899999999998654
No 379
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.2e-31 Score=246.26 Aligned_cols=267 Identities=21% Similarity=0.279 Sum_probs=194.1
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC--------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-------- 372 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 372 (623)
+.|....+||+|.||.||+|+.+ .|+.|++|+.-.. ..-.....+|+++|..++|+|++.++..|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34666788999999999999955 5777888766331 22234567899999999999999999888542
Q ss_pred CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecc
Q 006982 373 KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 373 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfg 452 (623)
...|+|+++|+. +|.-+|.. ....++..++.+++.++..||.|+|.. .|+|||+||.|+||+.++.+||+|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 346899999987 89988853 235688899999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHH--
Q 006982 453 LARLMNPIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA-- 529 (623)
Q Consensus 453 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~-- 529 (623)
+++...............++-|..|++||.+.+ ..|+.+.|||+-|||+.||+||.+-+......... ..+.....
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql-~~Is~LcGs~ 248 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL-HLISQLCGSI 248 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHH-HHHHHHhccC
Confidence 998765443333333334556999999998876 56899999999999999999999887664332110 00000000
Q ss_pred --------------HHhcc----CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 006982 530 --------------QLSST----GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 583 (623)
Q Consensus 530 --------------~~~~~----~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L 583 (623)
+.... ..-...+...+..-..+++...+++..+. .||.+|+++++++..-
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~----~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLK----LDPTKRIDADQALNHD 316 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhc----cCcccCcchHhhhchh
Confidence 00000 01122223333322334566666666555 8999999999987654
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=3e-29 Score=247.95 Aligned_cols=236 Identities=26% Similarity=0.317 Sum_probs=186.5
Q ss_pred CccEEEEEEeC-CCcEEEEEEeccccc-c-HHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccC
Q 006982 317 RTGTMYKALLE-DGTSLMVKRLQDSQR-S-EKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHP 393 (623)
Q Consensus 317 ~~g~Vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 393 (623)
+||.||+|... ++..+++|++..... . .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 489999999976432 2 57899999999999999999999999999999999999999999999863
Q ss_pred CCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCC
Q 006982 394 ADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFG 473 (623)
Q Consensus 394 ~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~g 473 (623)
. ..+++..++.++.+++.++.|||+. +++|+||+|+||++++++.++++|||.+....... ......+
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~ 148 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LLTTFVG 148 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----ccccccC
Confidence 2 2388999999999999999999999 99999999999999999999999999998765432 1123347
Q ss_pred cccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHH-
Q 006982 474 DLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDN- 552 (623)
Q Consensus 474 t~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~- 552 (623)
+..|++||......++.++||||||++++||++|..||...... ....++.... .........
T Consensus 149 ~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~~~~------------~~~~~~~~~~ 212 (244)
T smart00220 149 TPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKIGKP------------KPPFPPPEWK 212 (244)
T ss_pred CcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHhcc------------CCCCcccccc
Confidence 88999999998888899999999999999999999998652111 0111111100 000000000
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 553 ELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 553 ~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
....+.+++.+|+. .+|++||++.++++
T Consensus 213 ~~~~~~~~i~~~l~-~~p~~Rp~~~~~~~ 240 (244)
T smart00220 213 ISPEAKDLIRKLLV-KDPEKRLTAEEALQ 240 (244)
T ss_pred CCHHHHHHHHHHcc-CCchhccCHHHHhh
Confidence 11345666677887 89999999999986
No 381
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-30 Score=255.08 Aligned_cols=202 Identities=22% Similarity=0.260 Sum_probs=170.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccc----cHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQR----SEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
.+|....+||+|+||.|-.|..+ ...-+|||++++... ..+--+.|-++|..- +-|.++.++.+++.-+..|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888899999999999999865 355689999977532 222234566677665 567899999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
|||+.||+|--+++.. ..+.++.+..+|..||-||-|||++ +|+.||||..||++|.+|++||+|||+++.--
T Consensus 429 MEyvnGGDLMyhiQQ~----GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV----GKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHHh----cccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccccc
Confidence 9999999999988643 4578888999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~ 517 (623)
-.+.. ..+-+||+.|+|||.+...+|...+|.|||||+||||+.|..||++.+..
T Consensus 502 ~~~~T----TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~ 556 (683)
T KOG0696|consen 502 FDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 556 (683)
T ss_pred cCCcc----eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 32222 23345999999999999999999999999999999999999999875543
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=262.40 Aligned_cols=194 Identities=21% Similarity=0.374 Sum_probs=167.8
Q ss_pred cceeeccCccEEEEEEe-CCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 310 NNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
.++||+|.||+||-|++ ++|+.||||++.+. ...+..+.+|+.+|.++.||.||.+...|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 57999999999999995 57999999999764 34567889999999999999999999999999999999999965
Q ss_pred CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccccccCCCCC
Q 006982 386 SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 386 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla~~~~~~~~ 462 (623)
+..+.+-..+ ...+++..-..+..||..||.|||.+ +|+|+||||+|||+.. --++||+|||+|+.+...
T Consensus 648 DMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-- 720 (888)
T KOG4236|consen 648 DMLEMILSSE--KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-- 720 (888)
T ss_pred hHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchh--
Confidence 5544443322 25688888888999999999999999 9999999999999953 457999999999998753
Q ss_pred cccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 463 HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.+-+..+||+.|+|||++....|...-|+||.|||+|--++|..||..+
T Consensus 721 ---sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 721 ---SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred ---hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 3344567999999999999999999999999999999999999999754
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=6.9e-29 Score=273.71 Aligned_cols=201 Identities=20% Similarity=0.226 Sum_probs=140.2
Q ss_pred HhccCcccceeeccCccEEEEEEeC-C----CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEE------EEe
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-D----GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGF------CMA 371 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~~ 371 (623)
..++|...+.||+|+||.||+|++. + +..||+|++....... ....| .+....+.+++.++.. +..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e-~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE-IWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH-HHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 4578999999999999999999975 4 6899999876433211 11111 1122222222222211 234
Q ss_pred CCeeeEEEecCCCCCHhhhccCCCCC----------------CCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCC
Q 006982 372 KKERLLVYKHMPNGSLYDLLHPADDT----------------GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISS 435 (623)
Q Consensus 372 ~~~~~lV~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~ 435 (623)
..+.++|+||+++++|.++++..... .....+..+..++.|++.||+|||+. +|+||||||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP 283 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKP 283 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCH
Confidence 56789999999999999998643210 01112334567999999999999999 999999999
Q ss_pred CceeeCC-CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCC----------------------CCCcch
Q 006982 436 KCILLDD-DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL----------------------VATPKG 492 (623)
Q Consensus 436 ~NILl~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~k~ 492 (623)
+|||+++ ++.+||+|||+++.+....... .....++++|+|||.+... .++.++
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~---~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYI---PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccC---CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999985 6899999999998654322211 1223478999999965321 234567
Q ss_pred hHHHHHHHHHHHHhCCCCCC
Q 006982 493 DVYSFGTVLLELVTGERPTN 512 (623)
Q Consensus 493 DV~sfGvil~elltg~~P~~ 512 (623)
|||||||++|||+++..|+.
T Consensus 361 DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCc
Confidence 99999999999999776643
No 384
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.1e-29 Score=260.04 Aligned_cols=208 Identities=25% Similarity=0.292 Sum_probs=172.8
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
..|.+.+.||-|+||.|.++...| ...+|+|.+.+.. ........|-++|.....+.||+|+..|++++..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 357778899999999999998655 4557889886542 33456778999999999999999999999999999999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc--
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM-- 457 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~-- 457 (623)
||++||++-.+|-.. ..|.+..+..++.++.+|+++.|.. |+|||||||.|||||.+|++||+|||++.-.
T Consensus 709 dYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred eccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecccccccee
Confidence 999999999998532 4577887888888999999999999 9999999999999999999999999999532
Q ss_pred -------CCCCCcc-----------------------------cccccCCCCcccccCcccccCCCCCcchhHHHHHHHH
Q 006982 458 -------NPIDTHL-----------------------------STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVL 501 (623)
Q Consensus 458 -------~~~~~~~-----------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil 501 (623)
...+.+. .+.....+||+-|+|||++....|+.-+|.||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 1100000 0111234699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCccc
Q 006982 502 LELVTGERPTNVAKAPET 519 (623)
Q Consensus 502 ~elltg~~P~~~~~~~~~ 519 (623)
|||+.|+.||......+.
T Consensus 862 ~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGET 879 (1034)
T ss_pred HHHhhCCCCccCCCCCcc
Confidence 999999999988766544
No 385
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-31 Score=247.00 Aligned_cols=251 Identities=23% Similarity=0.323 Sum_probs=181.8
Q ss_pred cceeeccCccEEEEEEeC-CCcEEEEEEecccc--ccHHHHHHHHHHh-CCCCCCCCcceeEEEEeCCeeeEEEecCCCC
Q 006982 310 NNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ--RSEKEFVAEMATL-GSVKNRNLVPLLGFCMAKKERLLVYKHMPNG 385 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 385 (623)
...||.|.||+|+|-.++ .|+.+|||++.... .+.+++..|.+.. +.-+.||||+++|.+...+..|+-||.|.-
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~- 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI- 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-
Confidence 457999999999998854 79999999997643 4567788888875 444789999999999999999999999954
Q ss_pred CHhhhccCC-CCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 386 SLYDLLHPA-DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 386 sL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+..+-+.. ......+++.-.-+|..-...||.||-+.. .|+|||+||+|||+|..|.+||+|||++-.+..+
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S---- 221 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS---- 221 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH----
Confidence 766553211 112245777777788888899999999875 8999999999999999999999999999766431
Q ss_pred cccccCCCCcccccCcccccC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC-chhhhh
Q 006982 465 STFVNGEFGDLGYVAPEYART--LVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG-QLQDAI 541 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~ 541 (623)
.......|-..|||||.+.. ..|+.+|||||+|+.|+|+.||+.||..... ..+-+.+..... ++...-
T Consensus 222 -iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-------vfeql~~Vv~gdpp~l~~~ 293 (361)
T KOG1006|consen 222 -IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-------VFEQLCQVVIGDPPILLFD 293 (361)
T ss_pred -HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-------HHHHHHHHHcCCCCeecCc
Confidence 11112346678999999864 3488999999999999999999999864211 222222222221 111100
Q ss_pred chhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 542 DKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 542 d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
.. ..+--..+.+..-.|+- .|-+.||..+++.++
T Consensus 294 ~~------~~~~s~~~~~fintCl~-Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 294 KE------CVHYSFSMVRFINTCLI-KDRSDRPKYDDLKKF 327 (361)
T ss_pred cc------ccccCHHHHHHHHHHhh-cccccCcchhhhhcC
Confidence 00 11122344445556777 889999999887654
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-29 Score=223.75 Aligned_cols=198 Identities=23% Similarity=0.350 Sum_probs=165.3
Q ss_pred cCcccceeeccCccEEEEEE-eCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 306 SFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+|...++||+|.||+|++|+ +..+..||+|+++-.. .......+|+-+++.++|.|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667889999999999999 4568889999986433 3346788999999999999999999999988899999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
|.. +|..+... -+..++......++.|+.+|+.|.|++ ++.|||+||+|.||+.+|+.|++|||+++-..-.-
T Consensus 83 cdq-dlkkyfds---lng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFDS---LNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHHh---cCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 965 88888753 235688899999999999999999999 99999999999999999999999999998754321
Q ss_pred CcccccccCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVT-GERPTNVA 514 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~ellt-g~~P~~~~ 514 (623)
.++ ...+-|..|++|.++.+. -|+...|+||-|||+.|+.. |++-|.+.
T Consensus 156 ---rcy-saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~ 206 (292)
T KOG0662|consen 156 ---RCY-SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206 (292)
T ss_pred ---Eee-eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC
Confidence 111 223468999999998765 47899999999999999997 55545543
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=232.50 Aligned_cols=203 Identities=23% Similarity=0.326 Sum_probs=167.5
Q ss_pred CcccceeeccCccEEEEEEe-CCCcEEEEEEecccc--ccHHHHHHHHHHh-CCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 307 FSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ--RSEKEFVAEMATL-GSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
......||+|++|.|-+-++ .+|+..|+|++...- +..++..+|+++. +....|.+|.++|........++.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 34456799999999988875 479999999997643 4556788899884 4557899999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
.- ||..+-...-..+..+++.-.-+||..+.+||.|||++. .++|||+||+|||++.+|++|++|||.+-.+..+-.
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA 204 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA 204 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhhH
Confidence 65 888776554445678899999999999999999999986 899999999999999999999999999987653211
Q ss_pred cccccccCCCCcccccCccccc----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR----TLVATPKGDVYSFGTVLLELVTGERPTNVAKAP 517 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~----~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~ 517 (623)
. . -..|-..|||||.+. ...|+-|+||||+|+.+.||.+++.||+....+
T Consensus 205 k---t--~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 205 K---T--MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred H---H--HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 1 1 123667899999875 346899999999999999999999999865443
No 388
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.9e-30 Score=254.91 Aligned_cols=204 Identities=22% Similarity=0.289 Sum_probs=166.7
Q ss_pred cCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccc--------cHHHHHHHHHHhCCCCCCCCcceeEEEEe-CCee
Q 006982 306 SFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQR--------SEKEFVAEMATLGSVKNRNLVPLLGFCMA-KKER 375 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 375 (623)
+|-..++||+|||+.||+|. +...+.||||+-..... -.+...+|.++...+.||.||++++|+.- .+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 34445689999999999998 45677889997643221 23456789999999999999999999865 4567
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC---CCCCeEEeecc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD---DDFEPKISDFG 452 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~---~~~~~kl~Dfg 452 (623)
+-|+|||+|.+|.-+|+. ...+++..+..|+.||+.||.||.+. +|+|||-||||.|||+. .-|.+||+|||
T Consensus 544 CTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred eeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 899999999999999963 45689999999999999999999886 67899999999999994 56789999999
Q ss_pred cccccCCCCCc-ccc--cccCCCCcccccCccccc----CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 453 LARLMNPIDTH-LST--FVNGEFGDLGYVAPEYAR----TLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 453 la~~~~~~~~~-~~~--~~~~~~gt~~y~aPE~~~----~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+++.+...... ... ......||++|++||.+. ..+.+.|+||||.|||+|..+.|+.||...
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 99998654322 111 112235999999999874 346789999999999999999999999764
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.5e-30 Score=257.73 Aligned_cols=198 Identities=22% Similarity=0.315 Sum_probs=172.1
Q ss_pred CcccceeeccCccEEEEEEeCCCc-EEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGT-SLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+.....||-|+||.|-.+..+... .+|+|.+++.. ...++...|-.+|...+.|.||+++..|.++...|+.||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 344567999999999998865433 47888886542 3455678899999999999999999999999999999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPID 461 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 461 (623)
|-||.|...|. ..+.++..+...++..+.+|++|||++ +|+.|||||+|.++|.+|.+||.|||+|+.+....
T Consensus 502 ClGGElWTiLr----dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 502 CLGGELWTILR----DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hcCchhhhhhh----hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999996 346788888899999999999999999 99999999999999999999999999999987654
Q ss_pred CcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 462 THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 462 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
... ++ +||+.|.|||.+.....+..+|.||+|+++||+++|.+||...+.
T Consensus 575 KTw-TF----cGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 575 KTW-TF----CGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred cee-ee----cCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 432 22 499999999999998889999999999999999999999987554
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=7.9e-30 Score=272.21 Aligned_cols=249 Identities=24% Similarity=0.330 Sum_probs=184.3
Q ss_pred cCcccceeeccCcc-EEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 306 SFSKNNIIGSGRTG-TMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 306 ~f~~~~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
-|...+++|.|+.| .||+|..+ |+.||||++-... .+...+|+..|+.- +|||||++++.-.++...|+..|.|.
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 35666789999987 56999995 7899999985443 23456899988777 79999999998888899999999995
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-----CCCeEEeecccccccC
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-----DFEPKISDFGLARLMN 458 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-----~~~~kl~Dfgla~~~~ 458 (623)
. +|.+++...........-...+.+..|++.|++|||+. +|+||||||+||||+. ...++|+|||+++.+.
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 5 99999976411111111134567889999999999998 9999999999999975 2578999999999987
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCcccccccHHHHHHHHhccCch
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTG-ERPTNVAKAPETFKGNLVEWIAQLSSTGQL 537 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg-~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~ 537 (623)
........ ..+..||-||+|||.+....-+..+||||+|||+|+.++| .+||.+....+. ..+.....
T Consensus 663 ~~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~----------NIl~~~~~ 731 (903)
T KOG1027|consen 663 GGKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA----------NILTGNYT 731 (903)
T ss_pred CCcchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh----------hhhcCccc
Confidence 65544444 5566799999999999988888899999999999999985 999976432110 11111000
Q ss_pred hhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 538 QDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 538 ~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.. +|... .+.+..+++...+. .+|..||++.+|+.
T Consensus 732 L~----~L~~~-~d~eA~dLI~~ml~----~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 732 LV----HLEPL-PDCEAKDLISRMLN----PDPQLRPSATDVLN 766 (903)
T ss_pred ee----eeccC-chHHHHHHHHHhcC----CCcccCCCHHHHhC
Confidence 00 01111 11155555554443 89999999999964
No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-29 Score=245.98 Aligned_cols=202 Identities=21% Similarity=0.299 Sum_probs=170.3
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCC--C----CCcceeEEEEeCCeee
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN--R----NLVPLLGFCMAKKERL 376 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~l~~~~~~~~~~~ 376 (623)
+++|.+...+|+|.||.|-..... .+..||+|+++.-....+...-|++++.++.+ | -+|.+.+||...+..+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 567888999999999999999844 47899999998766666777789999999943 2 3677888899999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC--------------
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-------------- 442 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-------------- 442 (623)
+|+|.+ |-|+++++.... -.+++..+...|+.|++++++|||+. +++|.||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEecc-ChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 999998 669999997543 36788899999999999999999999 9999999999999931
Q ss_pred ------CCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 443 ------DFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 443 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
+..+||+|||-|+...... +.. +.|..|+|||++.+-.++..+||||+||||.|+.||..-|...+.
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h---s~i----VsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH---STI----VSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc---cee----eeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 3468999999998754422 222 357889999999999999999999999999999999999987654
Q ss_pred cc
Q 006982 517 PE 518 (623)
Q Consensus 517 ~~ 518 (623)
.|
T Consensus 315 ~E 316 (415)
T KOG0671|consen 315 LE 316 (415)
T ss_pred HH
Confidence 44
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-28 Score=233.15 Aligned_cols=199 Identities=20% Similarity=0.275 Sum_probs=170.2
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEE
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLV 378 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 378 (623)
++|....+||+|+|..|..+.++ +.+.+|+|++++.- ...+-.+.|-.+..+. +||.+|-+..+|+.....++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 56888899999999999999865 57789999887542 3334456677777666 799999999999999999999
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
.||++||+|--+++. ...+++..+..+...|..||.|||++ ||+.||||..|||+|.+|++|++|||+++.--
T Consensus 330 ieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999888753 35688888889999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
......+++ +||+-|+|||.+.+..|...+|.|++||+++||+.|+.||+.-
T Consensus 403 ~~gd~tstf----cgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 403 GPGDTTSTF----CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred CCCcccccc----cCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 322223333 4999999999999999999999999999999999999999753
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.5e-26 Score=222.84 Aligned_cols=209 Identities=28% Similarity=0.471 Sum_probs=177.1
Q ss_pred eeccCccEEEEEEeCC-CcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhh
Q 006982 313 IGSGRTGTMYKALLED-GTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYD 389 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~ 389 (623)
||+|.+|.||++...+ +..+++|++..... ..+.+.+|++.+..++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 89999999976654 35779999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeecccccccCCCCCcccccc
Q 006982 390 LLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLARLMNPIDTHLSTFV 468 (623)
Q Consensus 390 ~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfgla~~~~~~~~~~~~~~ 468 (623)
++.... ..+++..+..++.++++++.|||+. +++|+||+|.||+++. ++.++|+|||.+........ ..
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~----~~ 150 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS----LL 150 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----hh
Confidence 986331 3688999999999999999999999 9999999999999999 89999999999987654321 11
Q ss_pred cCCCCcccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhc
Q 006982 469 NGEFGDLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVA 547 (623)
Q Consensus 469 ~~~~gt~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 547 (623)
....+...|++||..... .++.++|+|++|+++++|
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 122367889999999877 788999999999999999
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 548 KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 548 ~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
..+.+++..|+. .+|++||++.++++.
T Consensus 188 -------~~~~~~l~~~l~-~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -------PELKDLIRKMLQ-KDPEKRPSAKEILEH 214 (215)
T ss_pred -------HHHHHHHHHHhh-CCcccCcCHHHHhhC
Confidence 233444455655 789999999999864
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=245.02 Aligned_cols=197 Identities=21% Similarity=0.304 Sum_probs=167.5
Q ss_pred hccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccH---------HHHHHHHHHhCCCC---CCCCcceeEEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSE---------KEFVAEMATLGSVK---NRNLVPLLGFCM 370 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~e~~~l~~l~---h~niv~l~~~~~ 370 (623)
..+|+..+.+|+|+||.|+.+.++ +...|++|.+.+++.-. ...-.|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 356888899999999999999976 46678888887654221 22456999999997 999999999999
Q ss_pred eCCeeeEEEecC-CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEe
Q 006982 371 AKKERLLVYKHM-PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKIS 449 (623)
Q Consensus 371 ~~~~~~lV~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~ 449 (623)
+++..|++||-. ++-+|++++.. .+.+++..+..|+.||+.|+++||++ +|+|||||-+||.++.+|-+||+
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEe
Confidence 999999999966 67799999963 35689999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCcccccccCCCCcccccCcccccCCCCC-cchhHHHHHHHHHHHHhCCCCCCC
Q 006982 450 DFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVAT-PKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 450 Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DV~sfGvil~elltg~~P~~~ 513 (623)
|||.+..... ...+.-+||.+|.|||++.+.+|- ..-|||++|++||.++....||+.
T Consensus 713 dfgsaa~~ks------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 713 DFGSAAYTKS------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eccchhhhcC------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999976533 122333599999999999988775 457999999999999999999864
No 395
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.7e-26 Score=224.47 Aligned_cols=198 Identities=27% Similarity=0.373 Sum_probs=170.0
Q ss_pred CcccceeeccCccEEEEEEeCC-CcEEEEEEeccccc--cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 307 FSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
|...+.||+|++|.||++...+ +..+++|.+..... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4556889999999999999775 88999999976543 46788899999999999999999999999899999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+++|.+++.... ..+++.....++.+++.++.|||+. +++|+|++|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 999999996432 1178999999999999999999999 9999999999999999999999999999876543200
Q ss_pred ccccccCCCCcccccCcccc-cCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 464 LSTFVNGEFGDLGYVAPEYA-RTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~-~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 155 ---~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ---LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ---cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11223467889999998 667778899999999999999999999964
No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.2e-27 Score=222.00 Aligned_cols=260 Identities=18% Similarity=0.312 Sum_probs=189.0
Q ss_pred ccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEE-EEeCCeeeEEEec
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGF-CMAKKERLLVYKH 381 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~lV~e~ 381 (623)
+.|.+.+.+|+|.||.+-.+.++ ..+.+++|.+.......++|.+|...--.+ .|.||+.-++. |+..+..++++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 46888899999999999999976 567899999998888899999999885555 68999988765 5666777789999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC--CCCCeEEeecccccccCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD--DDFEPKISDFGLARLMNP 459 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~--~~~~~kl~Dfgla~~~~~ 459 (623)
+|.|+|.+-+.. ..+.+....+++.|++.|+.|+|++ .++|||||.+||||- +...+|++|||+.+..+.
T Consensus 104 aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 104 APRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred CccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999998842 4467788899999999999999999 999999999999993 455899999999986543
Q ss_pred CCCcccccccCCCCcccccCcccccCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhcc
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTL-----VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSST 534 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~ 534 (623)
.- .....+..|.|||..... ...+.+|||.||++++.++||+.||......+.......+|.....
T Consensus 176 tV-------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~-- 246 (378)
T KOG1345|consen 176 TV-------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN-- 246 (378)
T ss_pred ee-------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC--
Confidence 21 112245678999976532 3567899999999999999999999753332221122222322111
Q ss_pred CchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccC
Q 006982 535 GQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 591 (623)
Q Consensus 535 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~ 591 (623)
..+.+.+. ...+.+.++++-.+. ++|++|--..++.++-.....+..
T Consensus 247 ~~~P~~F~------~fs~~a~r~Fkk~lt----~~~~drcki~~~kk~rk~~w~E~~ 293 (378)
T KOG1345|consen 247 PALPKKFN------PFSEKALRLFKKSLT----PRFKDRCKIWTAKKMRKCLWKEKL 293 (378)
T ss_pred ccCchhhc------ccCHHHHHHHHHhcC----CcccccchhHHHHHHHHHHHHHhh
Confidence 11111111 123444455544333 778888777777777665544443
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.8e-28 Score=225.33 Aligned_cols=198 Identities=24% Similarity=0.329 Sum_probs=163.5
Q ss_pred cccceeeccCccEEEEEEe-CCCcEEEEEEecccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeC-----CeeeEE
Q 006982 308 SKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAK-----KERLLV 378 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lV 378 (623)
+..+-||-|+||.||.... ++|+.|+.|++..-. .+.+.+-+|++++..++|.|++..++..+-. ++.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 4467899999999999985 489999999986533 3567788999999999999999998877543 357889
Q ss_pred EecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 379 YKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 379 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+|.|.. +|...+- ..+.++-....-+..||.+||.|||+. +|.||||||.|.|++.+...||+|||+++.-.
T Consensus 136 TELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 999854 8888873 557788888888999999999999999 99999999999999999999999999999755
Q ss_pred CCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
..+... +...+-|..|+|||.+++ ..|+.+.||||.|||+.|++..+.-|.....
T Consensus 208 ~d~~~h---MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 208 QRDRLN---MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred hhhhhh---hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 432211 111224778999999986 4689999999999999999998888865433
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=8.4e-26 Score=207.55 Aligned_cols=194 Identities=16% Similarity=0.298 Sum_probs=162.5
Q ss_pred hccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCC--eeeEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKK--ERLLVY 379 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lV~ 379 (623)
.++|++.+.+|+|.++.|+.|. ..+..++++|+++.- ..+.+.+|+.+|..++ ||||+++++...+.. ...+|+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF 114 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF 114 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence 3567888999999999999998 456788999999754 3567889999999997 999999999998765 456999
Q ss_pred ecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-CCCeEEeecccccccC
Q 006982 380 KHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-DFEPKISDFGLARLMN 458 (623)
Q Consensus 380 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-~~~~kl~Dfgla~~~~ 458 (623)
||+.+-+...+- +.++-........++..||.|+|+. ||.|||+||.|++||. .-..+|+|+|+|-+..
T Consensus 115 E~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 115 EYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 999998888776 4567777888999999999999999 9999999999999985 5579999999999877
Q ss_pred CCCCcccccccCCCCcccccCcccccC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYART-LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
+.... +-++.+--|.-||.+-. ..|+..-|+|||||++.+|+..+.||-..
T Consensus 185 p~~eY-----nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 185 PGKEY-----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred CCcee-----eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 64332 22335566788998865 45788999999999999999999998643
No 399
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=4.6e-25 Score=255.33 Aligned_cols=199 Identities=17% Similarity=0.166 Sum_probs=135.3
Q ss_pred CCCC-CCCcceeEEE-------EeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC
Q 006982 356 SVKN-RNLVPLLGFC-------MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR 427 (623)
Q Consensus 356 ~l~h-~niv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~ 427 (623)
.++| +||++++++| ......+.++||+ +++|.++|... ...+++.+++.++.||++||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4456 6888888877 2233456778887 55999999632 35689999999999999999999999 9
Q ss_pred cEecCCCCCceeeCC-------------------CCCeEEeecccccccCCCCC----c--------ccccccCCCCccc
Q 006982 428 IIHRNISSKCILLDD-------------------DFEPKISDFGLARLMNPIDT----H--------LSTFVNGEFGDLG 476 (623)
Q Consensus 428 i~H~dlk~~NILl~~-------------------~~~~kl~Dfgla~~~~~~~~----~--------~~~~~~~~~gt~~ 476 (623)
|+||||||+||||+. ++.+|++|||+++....... . .........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999965 44556666666654211000 0 0000011347888
Q ss_pred ccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHH
Q 006982 477 YVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQ 556 (623)
Q Consensus 477 y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 556 (623)
|||||++.+..++.++|||||||+||||++|..|+.... ......... .+.+. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~------~~~~~~~~~---------~~~~~-----~~~~~~~ 240 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS------RTMSSLRHR---------VLPPQ-----ILLNWPK 240 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH------HHHHHHHHh---------hcChh-----hhhcCHH
Confidence 999999999999999999999999999999888764210 011111100 00110 0111223
Q ss_pred HHHHHhhccCCCCCCCCCCHHHHHHH
Q 006982 557 FLKVACNCVLPTIPKERPTMFEVYQF 582 (623)
Q Consensus 557 ~~~~~~~C~~~~~P~~RPs~~ev~~~ 582 (623)
...++..|+. .+|.+||+|.|+++.
T Consensus 241 ~~~~~~~~L~-~~P~~Rps~~eil~h 265 (793)
T PLN00181 241 EASFCLWLLH-PEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHHhCC-CChhhCcChHHHhhc
Confidence 3455567776 999999999999763
No 400
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=7e-24 Score=214.35 Aligned_cols=131 Identities=19% Similarity=0.367 Sum_probs=114.1
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHHHHHHHHHhCCCC-----C---CCCcceeEEEEeC---
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-----N---RNLVPLLGFCMAK--- 372 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~~--- 372 (623)
++|.+.++||=|.|++||++. ..+.+.||+|+.+..+.-.+....||++|.+++ | .+||+++++|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 678899999999999999999 456788999999887777778889999999884 3 3799999999754
Q ss_pred -CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceee
Q 006982 373 -KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL 440 (623)
Q Consensus 373 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl 440 (623)
.+.++|+|++ |-+|..+|....- +.++.....+|+.||+.||.|||.+| +|||.||||+|||+
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 5789999999 6689999876544 45778899999999999999999999 99999999999999
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=2e-25 Score=232.90 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=190.1
Q ss_pred ccCcccceeeccCccEEEEEEe-CCCcEEEEEEecccc-ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDSQ-RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|....++|.|.||.|||++. ..+...|+|+++... ...+...+|+-+++.-+|||||.++|.+...+..++.|||+
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 4577788999999999999994 468889999998654 34456778999999999999999999999999999999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT 462 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~ 462 (623)
.+|+|++.-+ ...++++.+.........+|++|||+. +-+|||||-.|||+++.+.+|++|||.+-.+...-.
T Consensus 95 gggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~ 167 (829)
T KOG0576|consen 95 GGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA 167 (829)
T ss_pred CCCcccceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhh
Confidence 9999999886 336789999999999999999999999 889999999999999999999999999976643211
Q ss_pred cccccccCCCCcccccCccccc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 463 HLSTFVNGEFGDLGYVAPEYAR---TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 463 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.. ....||+.|||||+.. .+.|..++|||+.|+...|+-.-..|..+... .+-..-+...
T Consensus 168 Kr----ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------mr~l~LmTkS----- 230 (829)
T KOG0576|consen 168 KR----KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------MRALFLMTKS----- 230 (829)
T ss_pred hh----hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--------HHHHHHhhcc-----
Confidence 11 1234999999999873 56688999999999999999887777433211 1100000000
Q ss_pred hhch-hhhc-CCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHH
Q 006982 540 AIDK-CLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVY 580 (623)
Q Consensus 540 ~~d~-~l~~-~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~ 580 (623)
.+++ .+.. ..-.+-+..+++.++. .+|++||++...+
T Consensus 231 ~~qpp~lkDk~kws~~fh~fvK~alt----knpKkRptaeklL 269 (829)
T KOG0576|consen 231 GFQPPTLKDKTKWSEFFHNFVKGALT----KNPKKRPTAEKLL 269 (829)
T ss_pred CCCCCcccCCccchHHHHHHHHHHhc----CCCccCCChhhhe
Confidence 0111 1111 1123445566666554 8899999988754
No 402
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.91 E-value=6.5e-25 Score=211.51 Aligned_cols=193 Identities=25% Similarity=0.325 Sum_probs=158.4
Q ss_pred cCcccceeeccCccEEEEEEe-CCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeC------Cee
Q 006982 306 SFSKNNIIGSGRTGTMYKALL-EDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAK------KER 375 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 375 (623)
+|.....+|.|.- .|..+.. -.++.|++|++... ....++..+|...+..++|+|+++++.++.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555667888887 6666653 35788999988543 23456778899999999999999999988543 356
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLAR 455 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~ 455 (623)
|+|||||. ++|...++ ..++-.+..+|..|+.+|+.|||+. +|+||||||+||++..+..+||.|||+|+
T Consensus 97 y~v~e~m~-~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHhhh-hHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhc
Confidence 89999995 49998886 3467778889999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 456 LMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
.-... -.....+.|--|.|||++.+..+.+.+||||.||++.||++|+.-|.+.
T Consensus 167 ~e~~~-----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~ 220 (369)
T KOG0665|consen 167 TEDTD-----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK 220 (369)
T ss_pred ccCcc-----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence 65432 1122234677899999999888999999999999999999999988753
No 403
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-24 Score=204.87 Aligned_cols=246 Identities=24% Similarity=0.397 Sum_probs=183.9
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccc---cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDS---QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
.+|.+...|..|+|+++ |..+++|++.-. .+..+.|..|.-.++-+.||||++++|.|.......++..|||.|+|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 35778889999999997 556667777543 34456899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTF 467 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~ 467 (623)
+..||... +-..+-.++.+++.++|+|++|||+.. |-|.---|.+..|++|++.+++|+= +-++ .+..
T Consensus 275 ynvlhe~t--~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~k--------fsfq 342 (448)
T KOG0195|consen 275 YNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTK--------FSFQ 342 (448)
T ss_pred HHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-ccce--------eeee
Confidence 99998653 467788899999999999999999973 3344556889999999999998841 1111 1222
Q ss_pred ccCCCCcccccCcccccCCCCC---cchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 468 VNGEFGDLGYVAPEYARTLVAT---PKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 468 ~~~~~gt~~y~aPE~~~~~~~s---~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
..++...+.||+||.++..+-+ ..+|+|||.+++||+.|...||.+...-+..-+. .+ +-+...
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-------al------eglrv~ 409 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-------AL------EGLRVH 409 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-------hh------cccccc
Confidence 2344467899999999866533 5799999999999999999999865443211100 00 000111
Q ss_pred hhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 006982 545 LVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 587 (623)
Q Consensus 545 l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~ 587 (623)
+ ..+....+.+++. .|+. +||.+||.++.|+-.|+++.
T Consensus 410 i-ppgis~hm~klm~---icmn-edpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 410 I-PPGISRHMNKLMN---ICMN-EDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred C-CCCccHHHHHHHH---HHhc-CCCCcCCCcceehhhHHHhc
Confidence 1 1223444444444 5777 99999999999999998764
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=1.9e-23 Score=196.88 Aligned_cols=168 Identities=23% Similarity=0.241 Sum_probs=123.8
Q ss_pred CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcc
Q 006982 385 GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHL 464 (623)
Q Consensus 385 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 464 (623)
|+|.++++.. +..++|.+++.++.|++.||.|||+. + ||+|||+++++.+++ ||+++......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 7899999632 35699999999999999999999998 5 999999999999999 99998754321
Q ss_pred cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchh
Q 006982 465 STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKC 544 (623)
Q Consensus 465 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 544 (623)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...... ...+..+..........
T Consensus 64 ------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~------- 127 (176)
T smart00750 64 ------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL---SAILEILLNGMPADDPR------- 127 (176)
T ss_pred ------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh---cHHHHHHHHHhccCCcc-------
Confidence 13789999999999999999999999999999999999998643221 11112221111110000
Q ss_pred hhcCCCHHHH---HHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhc
Q 006982 545 LVAKGVDNEL---FQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGE 588 (623)
Q Consensus 545 l~~~~~~~~~---~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~ 588 (623)
........ ..+.+++..|+. .+|++||++.|+++.+..+..
T Consensus 128 --~~~~~~~~~~~~~~~~~i~~cl~-~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 128 --DRSNLESVSAARSFADFMRVCAS-RLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred --ccccHHHHHhhhhHHHHHHHHHh-cccccccCHHHHHHHHHHHHH
Confidence 00011111 235666667777 999999999999999987643
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.90 E-value=1.4e-24 Score=220.33 Aligned_cols=209 Identities=20% Similarity=0.248 Sum_probs=174.3
Q ss_pred cCHHHHHHHhccCcccceeeccCccEEEEEEeC-CCcEEEEEEeccccccHHHHHHHHHHhCCCCC------CCCcceeE
Q 006982 295 MRLSDLMKATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN------RNLVPLLG 367 (623)
Q Consensus 295 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~ 367 (623)
+.+.|+. -..|.+....|+|-|++|.+|... .|..||||++.....-.+.-+.|+++|.+|+. -|+++++.
T Consensus 424 v~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 424 VRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred Eehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 3444444 356888889999999999999954 58899999998887667777899999999953 48999999
Q ss_pred EEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCe
Q 006982 368 FCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEP 446 (623)
Q Consensus 368 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~ 446 (623)
.|...++.+||+|-+. .+|.+.|+... ....|.......++.|+..||..|-.. +|+|.||||.||||++. ..+
T Consensus 502 ~F~hknHLClVFE~Ls-lNLRevLKKyG-~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 502 HFKHKNHLCLVFEPLS-LNLREVLKKYG-RNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HhhhcceeEEEehhhh-chHHHHHHHhC-cccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCccee
Confidence 9999999999999884 59999997654 345678888999999999999999887 99999999999999865 457
Q ss_pred EEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 447 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 447 kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
||||||.|.......... +. -+--|.|||.+.+..|+...|+||.||.|||+.||+.-|.+.+.
T Consensus 577 KLCDfGSA~~~~eneitP--YL----VSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 577 KLCDFGSASFASENEITP--YL----VSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred eeccCccccccccccccH--HH----HHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 999999998775433221 11 23469999999999999999999999999999999999987544
No 406
>PLN03150 hypothetical protein; Provisional
Probab=99.89 E-value=1.3e-22 Score=226.58 Aligned_cols=184 Identities=32% Similarity=0.513 Sum_probs=134.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCcccCCCCCCCCCCCCCCcccceeecCCC-C--CcEEEEEecCCCceeeCCccccCCCC
Q 006982 29 YGTKEDLACLKSIKDSLEDPFNYLNSSWNFNNDTEGFICKFTGVECWHPD-E--NRVLNLRLTDMGLKGQFPRGIRNCSS 105 (623)
Q Consensus 29 ~~~~~d~~~Ll~~k~~~~~~~~~l~~sW~~~~~~~~~~c~w~gv~c~~~~-~--~~v~~l~l~~~~l~g~~p~~l~~l~~ 105 (623)
.+.++|..||+.+|+++.++.. .+|+++ ++....|.|.||.|.... . .+|+.|+|++|+|+|.+|+.|++|++
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~---~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR---FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc---CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 3467899999999999977642 389742 222223489999995321 1 35888999999999999999999999
Q ss_pred CCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccc
Q 006982 106 MTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVA 185 (623)
Q Consensus 106 L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~ 185 (623)
|+.|+|++|+|+|.+|..++.+.. |+.|||++|+|+|.+|..++++++|+.|+|++|+|+|.+|..++.+.
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~-L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~-------- 514 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITS-LEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL-------- 514 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCC-CCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhcc--------
Confidence 999999999999999988888654 99999999999988888888888899999988888888888775431
Q ss_pred cccccccCCccccccccccccCCCCCCCCCCC-CCCCCCCCCCCccceeeehhhhHH
Q 006982 186 NNLLSGSIPTFVNLTLSADSVTNNQGLCGEPL-DACKGTSKGPHTGVIAGAAIGGVT 241 (623)
Q Consensus 186 ~N~l~g~ip~~~~~~~~~~~~~~n~~l~~~~~-~~c~~~~~~~~~~~i~~~~i~~v~ 241 (623)
.......+.+|+.+|+.|. ..|... .....++++++++++
T Consensus 515 -------------~~~~~l~~~~N~~lc~~p~l~~C~~~---~~~~~~i~~~~~~~~ 555 (623)
T PLN03150 515 -------------LHRASFNFTDNAGLCGIPGLRACGPH---LSVGAKIGIAFGVSV 555 (623)
T ss_pred -------------ccCceEEecCCccccCCCCCCCCccc---CCCceEEEEEhHHHH
Confidence 0112234667778888764 667532 123334444444443
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.6e-22 Score=208.96 Aligned_cols=168 Identities=18% Similarity=0.146 Sum_probs=128.9
Q ss_pred HHhccCcccceeeccCccEEEEEEeC--CCcEEEEEEeccc------cccHHHHHHHHHHhCCCCCCCCcceeEEEEeCC
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE--DGTSLMVKRLQDS------QRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKK 373 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 373 (623)
...+.|...+.||+|+||+||+|.+. +++.||+|++... ......+.+|++++.+++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34567999999999999999999864 5778899987532 1124568999999999999999864332 24
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCC-CCCceeeCCCCCeEEeecc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNI-SSKCILLDDDFEPKISDFG 452 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dl-k~~NILl~~~~~~kl~Dfg 452 (623)
..++||||+++++|.... .. . ...++.+++++|.|||+. +|+|||| ||+|||++.++.+||+|||
T Consensus 92 ~~~LVmE~~~G~~L~~~~----~~-~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLAR----PH-G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CcEEEEEccCCCCHHHhC----cc-c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 579999999999997321 00 1 145788999999999999 9999999 9999999999999999999
Q ss_pred cccccCCCCCccc----ccccCCCCcccccCcccccCC
Q 006982 453 LARLMNPIDTHLS----TFVNGEFGDLGYVAPEYARTL 486 (623)
Q Consensus 453 la~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~ 486 (623)
+++.......... .-.....+++.|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9997654321111 011234578899999998643
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.88 E-value=2.1e-23 Score=208.45 Aligned_cols=203 Identities=24% Similarity=0.314 Sum_probs=164.6
Q ss_pred HHhccCcccceeeccCccEEEEEEeC----CCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeee
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALLE----DGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 376 (623)
...+.|...++||+|.|++||++... ....||+|.+.... ......+|+++|..+ -+.||+++.+++..++...
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 34467888999999999999999843 35779999886543 234588999999998 5899999999999999999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-CCCCeEEeeccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-DDFEPKISDFGLAR 455 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~ 455 (623)
+|+||++.-+..++.. .++......+...+..||+|+|+. ||+||||||+|+|.+ ..+.-.|.|||+|.
T Consensus 112 ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred EEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHH
Confidence 9999999999999883 466788889999999999999999 999999999999997 45667999999997
Q ss_pred ccCCC-------C------Cc-----------------cccc----------ccCCCCcccccCcccccC-CCCCcchhH
Q 006982 456 LMNPI-------D------TH-----------------LSTF----------VNGEFGDLGYVAPEYART-LVATPKGDV 494 (623)
Q Consensus 456 ~~~~~-------~------~~-----------------~~~~----------~~~~~gt~~y~aPE~~~~-~~~s~k~DV 494 (623)
..... . .. .... ...+.||+||+|||++.. ...+.++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 21100 0 00 0000 012469999999999865 456889999
Q ss_pred HHHHHHHHHHHhCCCCCCCCC
Q 006982 495 YSFGTVLLELVTGERPTNVAK 515 (623)
Q Consensus 495 ~sfGvil~elltg~~P~~~~~ 515 (623)
||.|||++-+++++.||....
T Consensus 262 ws~GVI~Lslls~~~PFf~a~ 282 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAK 282 (418)
T ss_pred eeccceeehhhccccccccCc
Confidence 999999999999999996543
No 409
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=1.1e-21 Score=233.19 Aligned_cols=158 Identities=37% Similarity=0.674 Sum_probs=120.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCcccCCCCCCCCCCCCCCcccceeecCCCCCcEEEEEecCCCceeeCCccccCCCCCCE
Q 006982 29 YGTKEDLACLKSIKDSLEDPFNYLNSSWNFNNDTEGFICKFTGVECWHPDENRVLNLRLTDMGLKGQFPRGIRNCSSMTG 108 (623)
Q Consensus 29 ~~~~~d~~~Ll~~k~~~~~~~~~l~~sW~~~~~~~~~~c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~ 108 (623)
...+.|+.||++||+++.+|...+ .+|+..+ +||.|.||+|++ .++|+.|+|++|+++|.+|+.+..+++|+.
T Consensus 25 ~~~~~~~~~l~~~~~~~~~~~~~~-~~w~~~~----~~c~w~gv~c~~--~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~ 97 (968)
T PLN00113 25 MLHAEELELLLSFKSSINDPLKYL-SNWNSSA----DVCLWQGITCNN--SSRVVSIDLSGKNISGKISSAIFRLPYIQT 97 (968)
T ss_pred CCCHHHHHHHHHHHHhCCCCcccC-CCCCCCC----CCCcCcceecCC--CCcEEEEEecCCCccccCChHHhCCCCCCE
Confidence 346789999999999998887666 5996433 599999999964 469999999999999999999999999999
Q ss_pred EEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccccccccccc
Q 006982 109 LDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNL 188 (623)
Q Consensus 109 L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~ 188 (623)
|+|++|+++|.+|..++...++|++|+|++|+++|.+|. +.+++|++|+|++|.++|.+|..++++++|+.|+|++|.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 999999999999998873234588888888887776664 345555555555555555555555555555555555555
Q ss_pred ccccCCc
Q 006982 189 LSGSIPT 195 (623)
Q Consensus 189 l~g~ip~ 195 (623)
++|.+|.
T Consensus 176 l~~~~p~ 182 (968)
T PLN00113 176 LVGKIPN 182 (968)
T ss_pred ccccCCh
Confidence 5555554
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=2.2e-20 Score=193.46 Aligned_cols=264 Identities=18% Similarity=0.181 Sum_probs=191.6
Q ss_pred cCcccceeeccCccEEEEEEeCCC--cEEEEEEeccccc-cHHHHHHHHHHhCCCCC----CCCcceeEEE-EeCCeeeE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDG--TSLMVKRLQDSQR-SEKEFVAEMATLGSVKN----RNLVPLLGFC-MAKKERLL 377 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l 377 (623)
.|.+.+.||+|+||.||.+...+. ..+|+|....... ....+..|+.++..+.+ +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 788899999999999999996553 4788887755322 12267778888888763 5888888888 46778899
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-----CCeEEeecc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-----FEPKISDFG 452 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-----~~~kl~Dfg 452 (623)
||+.+ |.+|.++..... ...++..+.+.|+.|+..+|.+||+. |++||||||.|+.+... ..+.+.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99988 779999875443 46799999999999999999999999 99999999999999865 469999999
Q ss_pred ccc--ccCCCCC---ccccc-ccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHH
Q 006982 453 LAR--LMNPIDT---HLSTF-VNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVE 526 (623)
Q Consensus 453 la~--~~~~~~~---~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~ 526 (623)
+++ ....... ..... .....||..|.++....+...+.+.|+||++.++.|++.|..||........ ..
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~~ 247 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----KS 247 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----HH
Confidence 999 3322111 01111 1234599999999999999999999999999999999999999965433211 00
Q ss_pred HHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 527 WIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 527 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
-+..... ...... .....+.++.++.+.... .+..++|....+...+++...+.
T Consensus 248 ~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~----~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 248 KFEKDPR----KLLTDR--FGDLKPEEFAKILEYIDS----LDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHhh----hhcccc--ccCCChHHHHHHHHHhhc----cCCcCCCCHHHHHHHHHHHHHhc
Confidence 0111000 000000 111234555555554433 56899999999999988765544
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=1.5e-19 Score=186.13 Aligned_cols=202 Identities=30% Similarity=0.426 Sum_probs=167.9
Q ss_pred CcccceeeccCccEEEEEEeCCCcEEEEEEeccccc----cHHHHHHHHHHhCCCCCC-CCcceeEEEEeCCeeeEEEec
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR----SEKEFVAEMATLGSVKNR-NLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e~ 381 (623)
|...+.||.|+||.||++... ..+++|.+..... ....+.+|+..+..+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556778999999999999987 7888898866432 366789999999999988 799999999777778999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCC-CeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgla~~~~~~ 460 (623)
+.++++.+++...... ..+.......+..+++.++.|+|+. +++|||+||+||+++... .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999777532211 2688889999999999999999999 899999999999999988 7999999999865443
Q ss_pred CCccc--ccccCCCCcccccCcccccC---CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLS--TFVNGEFGDLGYVAPEYART---LVATPKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~s~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
..... .......|+..|+|||.+.. ..++...|+||+|++++++++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~ 214 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGE 214 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 22211 12344568999999999987 57889999999999999999999997643
No 412
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=8.3e-21 Score=199.59 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=182.6
Q ss_pred hCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCc-EecC
Q 006982 354 LGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRI-IHRN 432 (623)
Q Consensus 354 l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i-~H~d 432 (623)
|+.+.|.|+.+++|.+.+....++|.+|+..|+|.+.+.. ....++|.....+..+++.||.|||+. +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 4678999999999999999999999999999999999974 346799999999999999999999998 55 9999
Q ss_pred CCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccCC-------CCCcchhHHHHHHHHHHHH
Q 006982 433 ISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTL-------VATPKGDVYSFGTVLLELV 505 (623)
Q Consensus 433 lk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~k~DV~sfGvil~ell 505 (623)
++++|.++|....+|++|||+............. .......-|.|||.+... ..+.+.||||||++++|++
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~--~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAH--HPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eccccceeeeeEEEEechhhhccccccccccccc--chhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 9999999999999999999999876421000000 001134679999998763 1467899999999999999
Q ss_pred hCCCCCCCCCCcccccccHHHHHHHHhccCchhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 006982 506 TGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRA 585 (623)
Q Consensus 506 tg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~ 585 (623)
+.+.||+.....+.. ..+...+.. .-...+.+.+.... +....++.++..|+. .+|.+||++++|-..++.
T Consensus 153 ~r~~~~~~~~~~~~~-~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~-e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDP-DEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWE-EIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred hccCccccccccCCh-HHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcc-cChhhCccHHHHHhhhhh
Confidence 999999865443322 122222222 00111111111110 111256777778888 999999999999999998
Q ss_pred hhcccC-CCCCcccccCCCCCCchhhHHHHHhc
Q 006982 586 IGERYH-FTTEDEIMLPSDSGDADILEELIVAR 617 (623)
Q Consensus 586 i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (623)
+..... ..+..+.+.--...|++.+|.++..|
T Consensus 224 ~~~~~~~~~nl~D~m~~~le~Y~~nLe~~v~eR 256 (484)
T KOG1023|consen 224 INKGGSSKGNLMDSLFRMLESYADNLEKLVDER 256 (484)
T ss_pred hcccccccchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 866542 34666666666778888888888876
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=2.1e-19 Score=174.25 Aligned_cols=269 Identities=18% Similarity=0.208 Sum_probs=204.5
Q ss_pred cCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 306 SFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.|.+.++||+|.||.++.|+ +-++..||+|.-.... ..-++..|.+..+.+ ..+.|...+.|-....+..||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 57889999999999999998 5679999999653322 233566677776666 4588888888877777888999998
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-----CCCeEEeecccccccC
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-----DFEPKISDFGLARLMN 458 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-----~~~~kl~Dfgla~~~~ 458 (623)
|-||.|+..- -+..++..+...+|.|+..-++|+|++ .+|.|||||+|.||.. ...+.++|||+|+.+.
T Consensus 107 GPSLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 107 GPSLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred CcCHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 7799988742 346799999999999999999999999 9999999999999963 4458999999999886
Q ss_pred CCCCccccccc---CCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccC
Q 006982 459 PIDTHLSTFVN---GEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTG 535 (623)
Q Consensus 459 ~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~ 535 (623)
...+......+ ...||.+||+-....+...+.+-|.=|+|-++.+.+-|..||.+......- .--+-+....+.-
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK--~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK--EKYEKIGETKRST 258 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH--HHHHHhccccccC
Confidence 65444333222 235999999999999999999999999999999999999999875543210 0011111222222
Q ss_pred chhhhhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhcccCCCC
Q 006982 536 QLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTT 594 (623)
Q Consensus 536 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 594 (623)
.+.++.+ +.++++..-++.+.. .+=.+-|..+-+...+.++.++...+.
T Consensus 259 ~i~~Lc~------g~P~efa~Yl~yvR~----L~F~E~PDYdylr~Lf~dvldr~g~t~ 307 (449)
T KOG1165|consen 259 PIEVLCE------GFPEEFATYLRYVRR----LDFFETPDYDYLRKLFDDVLDRLGETD 307 (449)
T ss_pred CHHHHHh------cCHHHHHHHHHHHHh----cCcccCCCHHHHHHHHHHHHHhcCCcc
Confidence 3333322 467888888887766 567889999998888888877766554
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=4.6e-21 Score=211.05 Aligned_cols=254 Identities=20% Similarity=0.223 Sum_probs=183.7
Q ss_pred ccceeeccCccEEEEEEeC-CCcEEEEEEec----ccc---ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 309 KNNIIGSGRTGTMYKALLE-DGTSLMVKRLQ----DSQ---RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 309 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
..+++|.|.+|.|+..... .......|.+. ... .....+..|+.+-..+.|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4678999999988777643 33333444332 111 111225678888899999999888887777666666699
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCC
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
|+++ +|+.++.. ...+....+-.+..|+..|+.|+|+. +|.|||+|++|++++.++.+||+|||.+....-.
T Consensus 402 ~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 99999953 23677788889999999999999999 9999999999999999999999999999765432
Q ss_pred CCcccccccCCCCcccccCcccccCCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCCcccccccHHHHHHHHhccCchhh
Q 006982 461 DTHLSTFVNGEFGDLGYVAPEYARTLVATP-KGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQD 539 (623)
Q Consensus 461 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~-k~DV~sfGvil~elltg~~P~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (623)
.........+..|+-.|+|||.+....|.+ ..||||.|+++..|.+|+.||......+... .......+...
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------~~~~~~~~~~~ 546 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------KTNNYSDQRNI 546 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------hhhcccccccc
Confidence 222224455677999999999999988876 5899999999999999999997644332210 00000000000
Q ss_pred hhchhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 006982 540 AIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQ 581 (623)
Q Consensus 540 ~~d~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~ 581 (623)
.. ........+..-.+.++.|+.+.+|.+|-|+++|++
T Consensus 547 -~~---~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 -FE---GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -cc---ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00 000122344556677788888999999999999875
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=5.5e-20 Score=174.90 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=108.7
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccc---c-------H-----------------HHHHHHHHHhCCCCCCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---S-------E-----------------KEFVAEMATLGSVKNRNL 362 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~-------~-----------------~~~~~e~~~l~~l~h~ni 362 (623)
...||+|++|.||+|...+|+.||+|+++.... . . .....|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467999999999999988999999999965421 1 0 122349999999988876
Q ss_pred cceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHH-HhcCCCCcEecCCCCCceeeC
Q 006982 363 VPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 363 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yL-H~~~~~~i~H~dlk~~NILl~ 441 (623)
.....+.. ...++||||++++++..... ....+++.....++.|++.+|.|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 44333322 23489999999987765432 124678899999999999999999 577 999999999999998
Q ss_pred CCCCeEEeecccccccC
Q 006982 442 DDFEPKISDFGLARLMN 458 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~~~ 458 (623)
++.++|+|||++....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999998543
No 416
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.5e-19 Score=170.96 Aligned_cols=139 Identities=19% Similarity=0.196 Sum_probs=111.2
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEecccccc---------------------------HHHHHHHHHHhCCCCCCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS---------------------------EKEFVAEMATLGSVKNRNL 362 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~e~~~l~~l~h~ni 362 (623)
...||+|++|.||+|...+|+.||+|++...... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998754210 1123578899999999987
Q ss_pred cceeEEEEeCCeeeEEEecCCCCCHhhh-ccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceee
Q 006982 363 VPLLGFCMAKKERLLVYKHMPNGSLYDL-LHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILL 440 (623)
Q Consensus 363 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl 440 (623)
.....+... ..++||||++++++... +. ...++......++.+++.++.++|+ . +|+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 655544333 34899999998865443 32 1346778889999999999999999 8 99999999999999
Q ss_pred CCCCCeEEeecccccccCC
Q 006982 441 DDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 441 ~~~~~~kl~Dfgla~~~~~ 459 (623)
+ ++.++|+|||++..+..
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 78999999999987643
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=3.8e-20 Score=203.21 Aligned_cols=197 Identities=24% Similarity=0.285 Sum_probs=155.6
Q ss_pred cCcccceeeccCccEEEEEEeCCCcEEEEEEecccc--ccHHHH---HHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEe
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ--RSEKEF---VAEMATLGSVKNRNLVPLLGFCMAKKERLLVYK 380 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 380 (623)
++...+.+|++.|=.|.+|+..+|. |+||++.+.. ..-+.| ..|++ ...++|||++++.-+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4566788999999999999999888 8889885432 333333 44555 566699999998888777777889999
Q ss_pred cCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC-C
Q 006982 381 HMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN-P 459 (623)
Q Consensus 381 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~-~ 459 (623)
|+.+ +|+|.+. .++.+...+..-|+.|+..|+..+|+. +|.|||||.+||||+.-..+.|+||.-.+... +
T Consensus 102 yvkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 9966 9999994 556788888999999999999999999 99999999999999999999999998776431 1
Q ss_pred CC--CcccccccCCCCcccccCcccccCC-----------CCCcchhHHHHHHHHHHHHh-CCCCCC
Q 006982 460 ID--THLSTFVNGEFGDLGYVAPEYARTL-----------VATPKGDVYSFGTVLLELVT-GERPTN 512 (623)
Q Consensus 460 ~~--~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~k~DV~sfGvil~ellt-g~~P~~ 512 (623)
.+ .....+.++...-..|+|||.+-.. ..+++.||||.||++.|+++ |++||.
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 11 2233445555566789999976431 15678999999999999998 677774
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=7.1e-20 Score=176.20 Aligned_cols=169 Identities=10% Similarity=0.098 Sum_probs=131.8
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHH----------HHHHHHHHhCCCCCCCCcceeEEEEeC-
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK----------EFVAEMATLGSVKNRNLVPLLGFCMAK- 372 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~e~~~l~~l~h~niv~l~~~~~~~- 372 (623)
.++|...+++|.|+||.||.+.. ++..+++|.+.......+ .+.+|++.+.+++|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 57899999999999999999766 577899999975432222 268899999999999999999886643
Q ss_pred -------CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC
Q 006982 373 -------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445 (623)
Q Consensus 373 -------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~ 445 (623)
...++||||++|.+|.++.. ++. ....+++.++..+|.. +++|||+||+||++++++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-
Confidence 34789999999999988742 121 2456899999999999 999999999999999988
Q ss_pred eEEeecccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 006982 446 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELV 505 (623)
Q Consensus 446 ~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ell 505 (623)
++++|||......... .. ..+.....+..++|+||||+.+.-..
T Consensus 173 i~liDfg~~~~~~e~~-a~---------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRK-AK---------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchh-hH---------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999999887543211 10 11334445667999999999887544
No 419
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.80 E-value=8.7e-20 Score=169.43 Aligned_cols=204 Identities=21% Similarity=0.258 Sum_probs=165.7
Q ss_pred ccCcccceeeccCccEEEEEE-eCCCcEEEEEEeccccccHHHHHHHHHHhCCCCC-CCCcceeEEEEeCCeeeEEEecC
Q 006982 305 NSFSKNNIIGSGRTGTMYKAL-LEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN-RNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
++|...+.||+|+||.+|.|. ..+|.+||+|.-.... ...+...|.++.+.++| ..|..+..|..+.....+|||..
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 578889999999999999998 6789999999865433 22356678888888876 56777777888888889999998
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC---CCCeEEeecccccccCC
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD---DFEPKISDFGLARLMNP 459 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~---~~~~kl~Dfgla~~~~~ 459 (623)
|.||.++..- -...++..+.+-+|.|+..-++|+|.+ +++||||||+|.|..- ...+.++|||+++....
T Consensus 94 -GPsLEdLfnf---C~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 94 -GPSLEDLFNF---CSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred -CccHHHHHHH---HhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 7799998742 235688999999999999999999999 8999999999999964 44689999999998754
Q ss_pred CCCccc--c-cccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 460 IDTHLS--T-FVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 460 ~~~~~~--~-~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
..+... . .-....||.+|.+-....+...+.+-|+=|+|.+|.+.--|..||.+...
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 332222 1 12234589999998888877888999999999999999999999987544
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=8e-19 Score=165.28 Aligned_cols=188 Identities=17% Similarity=0.141 Sum_probs=140.0
Q ss_pred cccceeeccCccEEEEEEeCCCcEEEEEEeccccccHH-----HHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEec
Q 006982 308 SKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEK-----EFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
.+...|++|+||+||.+.. .+.+++.+.+........ .+.+|+++|.++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997766 678888888876654333 5789999999995 4789888886 446899999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCC-CCCceeeCCCCCeEEeecccccccCCC
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNI-SSKCILLDDDFEPKISDFGLARLMNPI 460 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dl-k~~NILl~~~~~~kl~Dfgla~~~~~~ 460 (623)
++|.+|.+.+.. . ...++.+++.++.++|+. +|+|||| ||+|||++.++.++|+|||++......
T Consensus 80 I~G~~L~~~~~~-----~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 80 LAGAAMYQRPPR-----G------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred ecCccHHhhhhh-----h------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 999999765421 1 134678899999999999 9999999 799999999999999999999865432
Q ss_pred CCcccccc---------cCCCCcccccCcccccCC-CCC-cchhHHHHHHHHHHHHhCCCCCCCC
Q 006982 461 DTHLSTFV---------NGEFGDLGYVAPEYARTL-VAT-PKGDVYSFGTVLLELVTGERPTNVA 514 (623)
Q Consensus 461 ~~~~~~~~---------~~~~gt~~y~aPE~~~~~-~~s-~k~DV~sfGvil~elltg~~P~~~~ 514 (623)
........ .....+++|++|+...-. ..+ ...+.++-|.-+|.++|++.+.-.+
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 21100000 012256677777643321 223 5678889999999999999987543
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=1.3e-17 Score=165.32 Aligned_cols=197 Identities=20% Similarity=0.266 Sum_probs=131.2
Q ss_pred CcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCC----------CCCcceeEEEE-
Q 006982 307 FSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKN----------RNLVPLLGFCM- 370 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~- 370 (623)
+...+.||.|+++.||.++.. +++++++|++.... ...+++.+|.-....+.+ -.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 344688999999999999976 48999999985432 334567777655555433 12222222221
Q ss_pred --------eCC--------eeeEEEecCCCCCHhhhccC---CCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEec
Q 006982 371 --------AKK--------ERLLVYKHMPNGSLYDLLHP---ADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHR 431 (623)
Q Consensus 371 --------~~~--------~~~lV~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~ 431 (623)
... ..+++|+-+ .+||.+++.. .......+....++.+..|+++.+++||+. |++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 111 235677777 5588887532 222234456677888889999999999999 99999
Q ss_pred CCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCcccccC--------CCCCcchhHHHHHHHHHH
Q 006982 432 NISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYART--------LVATPKGDVYSFGTVLLE 503 (623)
Q Consensus 432 dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~k~DV~sfGvil~e 503 (623)
||+|+|++++.+|.+.|+||+.....+... .. ...+..|.+||.... ..++.+.|.|++|+++|.
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRY---RC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEE---EG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCcee---ec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 999999999999999999998887654311 11 124577999997643 257889999999999999
Q ss_pred HHhCCCCCCCC
Q 006982 504 LVTGERPTNVA 514 (623)
Q Consensus 504 lltg~~P~~~~ 514 (623)
|.+|+.||...
T Consensus 243 lWC~~lPf~~~ 253 (288)
T PF14531_consen 243 LWCGRLPFGLS 253 (288)
T ss_dssp HHHSS-STCCC
T ss_pred HHHccCCCCCC
Confidence 99999999864
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=2.8e-17 Score=157.87 Aligned_cols=136 Identities=16% Similarity=0.198 Sum_probs=104.8
Q ss_pred cccceeeccCccEEEEEEeCCCcEEEEEEeccc-cccHHHHHHHHHHhCCC-----CCCCCcceeEEEEeCC---eee-E
Q 006982 308 SKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDS-QRSEKEFVAEMATLGSV-----KNRNLVPLLGFCMAKK---ERL-L 377 (623)
Q Consensus 308 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~-l 377 (623)
+....||+|+||.||. .-.++.. ++|++... ....+.+.+|+++++.+ .||||++++++++++. ..+ +
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 4467899999999996 3234444 68887643 23456789999999999 5799999999998874 333 7
Q ss_pred EEec--CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHH-HHHHhcCCCCcEecCCCCCceeeCC----CCCeEEee
Q 006982 378 VYKH--MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF-AWLHHNCNPRIIHRNISSKCILLDD----DFEPKISD 450 (623)
Q Consensus 378 V~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l-~yLH~~~~~~i~H~dlk~~NILl~~----~~~~kl~D 450 (623)
|+|| +++|+|.+++.. ..+++. ..++.++..++ +|||+. +|+||||||+|||++. +..++|+|
T Consensus 83 I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 8999 668999999953 224444 35577788777 999999 9999999999999974 34799999
Q ss_pred ccccc
Q 006982 451 FGLAR 455 (623)
Q Consensus 451 fgla~ 455 (623)
|+.+.
T Consensus 153 g~G~~ 157 (210)
T PRK10345 153 NIGES 157 (210)
T ss_pred CCCCc
Confidence 54443
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=5.8e-18 Score=190.02 Aligned_cols=198 Identities=21% Similarity=0.215 Sum_probs=157.6
Q ss_pred HHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCC---CCCCcceeEEEEeCCeeeE
Q 006982 301 MKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK---NRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 301 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l 377 (623)
......|.+...||+|+||+||+|...+|+.||+|+-+....+ +|.--.+++.+|+ -+-|..+...+...+.-++
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 3344678888999999999999999888999999987765433 2222223333343 2345555555666778899
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC-------CCCCeEEee
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD-------DDFEPKISD 450 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~-------~~~~~kl~D 450 (623)
|+||.+.|+|.+++. ..+.++|.-.+.++.|+++-+.+||.. +|||+||||+|.+|. +...++|+|
T Consensus 772 v~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEe
Confidence 999999999999996 457799999999999999999999999 999999999999993 345689999
Q ss_pred cccccccCCCCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCC
Q 006982 451 FGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGER 509 (623)
Q Consensus 451 fgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~ 509 (623)
||.+-.+..- .......+.++|-++-++|...++..+.++|.|.+.-+++-|+.|+.
T Consensus 845 fG~siDm~lf--p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 845 FGRSIDMKLF--PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cccceeeeEc--CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999765321 11123445568899999999999999999999999999999999875
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=1.7e-18 Score=181.96 Aligned_cols=185 Identities=24% Similarity=0.275 Sum_probs=152.0
Q ss_pred eeeccCccEEEEEE----eCCCcEEEEEEecccc---ccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEecCC
Q 006982 312 IIGSGRTGTMYKAL----LEDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
++|+|.||.|+... ...|.-+++|.+++.. ........|..++...+ ||.+|++...++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36899999998754 2346677888776532 11224456777788886 9999999999999999999999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH 463 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~ 463 (623)
+|+|...+.. ...++..........++-++.++|+. +|+|||+|++||+++.+|++++.|||+.+..-.....
T Consensus 81 gg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9999999863 34466666677778899999999999 9999999999999999999999999999975432211
Q ss_pred ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 464 LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 464 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
+||..|||||++. .....+|.||||++++||+||..||..
T Consensus 154 --------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 --------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred --------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 4899999999998 446789999999999999999999975
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=7.2e-17 Score=158.80 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=110.4
Q ss_pred cCcccceeeccCccEEEEEE--eCCCcEEEEEEeccccc-------------------------cHHHHHHHHHHhCCCC
Q 006982 306 SFSKNNIIGSGRTGTMYKAL--LEDGTSLMVKRLQDSQR-------------------------SEKEFVAEMATLGSVK 358 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~-------------------------~~~~~~~e~~~l~~l~ 358 (623)
-|...+.||+|++|.||+|. ..+|+.||+|++..... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47778999999999999998 56899999999864321 0123568999999997
Q ss_pred CCC--CcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCC-cEecCCCC
Q 006982 359 NRN--LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPR-IIHRNISS 435 (623)
Q Consensus 359 h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~-i~H~dlk~ 435 (623)
+.. +.+++++ ...++||||+++++|...... ...+.......++.|++.++.|||+. + ++||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 533 3333432 235899999999888776421 23345566788999999999999999 8 99999999
Q ss_pred CceeeCCCCCeEEeecccccccC
Q 006982 436 KCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 436 ~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+||+++ ++.++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999988644
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.2e-16 Score=153.59 Aligned_cols=143 Identities=22% Similarity=0.192 Sum_probs=111.5
Q ss_pred HHHHhccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccc-----------------------cHHHHHHHHHHhCC
Q 006982 300 LMKATNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR-----------------------SEKEFVAEMATLGS 356 (623)
Q Consensus 300 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~e~~~l~~ 356 (623)
+......|...+.||+|+||.||++...+|+.|+||++..... ....+..|+..+.+
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 3333334777899999999999999988899999998754321 11235678888888
Q ss_pred CCCCC--CcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 006982 357 VKNRN--LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNIS 434 (623)
Q Consensus 357 l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk 434 (623)
+.|++ +...++ ....++||||+++++|.+.... .....++.+++.++.++|+. +++|||||
T Consensus 90 l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~ 152 (198)
T cd05144 90 LYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLS 152 (198)
T ss_pred HHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCC
Confidence 87774 444443 2456899999999999876421 23457889999999999998 99999999
Q ss_pred CCceeeCCCCCeEEeecccccccCC
Q 006982 435 SKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 435 ~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
|+||++++++.++|+|||.+.....
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCCC
Confidence 9999999999999999999976543
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=1.2e-16 Score=155.35 Aligned_cols=133 Identities=17% Similarity=0.267 Sum_probs=113.0
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccc---------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR---------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
+.||+|++|.||+|.. ++..+++|+...... ....+.+|++++..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999988 577888897653221 123577899999999999998888888778888999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
++|++|.+++... .+ .+..++.+++.+|.++|+. +++|+|++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998421 12 7889999999999999999 999999999999999 78999999998874
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=1.9e-16 Score=175.21 Aligned_cols=137 Identities=17% Similarity=0.248 Sum_probs=112.0
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccc--------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeee
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ--------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 376 (623)
..|...+.||+|+||.||+|.+.+...++.++..... .....+.+|++++.+++|++++....++......+
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence 3445678999999999999987654443333332211 12346789999999999999998888888877889
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+||||+++++|.+++. .+..++.+++++|.|||+. +++||||||+||++ +++.++|+|||+++.
T Consensus 413 lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999883 3567899999999999999 99999999999999 678999999999975
Q ss_pred c
Q 006982 457 M 457 (623)
Q Consensus 457 ~ 457 (623)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=2.6e-16 Score=151.42 Aligned_cols=129 Identities=16% Similarity=0.280 Sum_probs=106.9
Q ss_pred eeeccCccEEEEEEeCCCcEEEEEEecccc--c-------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecC
Q 006982 312 IIGSGRTGTMYKALLEDGTSLMVKRLQDSQ--R-------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHM 382 (623)
Q Consensus 312 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 382 (623)
.||+|++|.||+|.+ ++..+++|...... . ....+.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999995 57788999864321 1 1245778999999999988766666666777789999999
Q ss_pred CCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 383 PNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 383 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+|++|.+++... .. .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999987421 11 7899999999999999 999999999999999 78999999999875
No 430
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=7.1e-16 Score=153.05 Aligned_cols=146 Identities=25% Similarity=0.303 Sum_probs=108.5
Q ss_pred CCCCCcceeEEEEeC---------------------------CeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHH
Q 006982 358 KNRNLVPLLGFCMAK---------------------------KERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIA 410 (623)
Q Consensus 358 ~h~niv~l~~~~~~~---------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 410 (623)
+|||||++.++|.+. ...|+||.-++. +|.+++.. ...+...+.-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc-----CCCchHHHHHHH
Confidence 699999998877542 235788887765 89999842 345556677788
Q ss_pred HHHHHHHHHHHhcCCCCcEecCCCCCceee--CCCC--CeEEeecccccccCCCC---CcccccccCCCCcccccCcccc
Q 006982 411 IGAARGFAWLHHNCNPRIIHRNISSKCILL--DDDF--EPKISDFGLARLMNPID---THLSTFVNGEFGDLGYVAPEYA 483 (623)
Q Consensus 411 ~~ia~~l~yLH~~~~~~i~H~dlk~~NILl--~~~~--~~kl~Dfgla~~~~~~~---~~~~~~~~~~~gt~~y~aPE~~ 483 (623)
.|+.+|+.|||.+ +|.|||+|++|||+ |+|. ...|+|||++---.... ...+-.+ ..-|.-..||||+.
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~V-d~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEV-DLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccc-cCCCcceecchhhh
Confidence 9999999999999 99999999999999 4444 46889999985422211 1111111 12356678999988
Q ss_pred cCCC------CCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 484 RTLV------ATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 484 ~~~~------~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
...+ --.|+|.|+.|-+.||+++...||+.
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence 6532 23589999999999999999999986
No 431
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=3.4e-16 Score=172.48 Aligned_cols=175 Identities=21% Similarity=0.285 Sum_probs=125.5
Q ss_pred ccCcccceeeccCccEEEEEEeCC-CcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCC
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMP 383 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 383 (623)
.+|...+.|..|+||.||..+++. .+..|+|+-+..- +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----ilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----ILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccch-----hhhc--cccccCCccee--------------------
Confidence 578889999999999999998764 5566764322111 0000 23333334333
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCC-
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDT- 462 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~- 462 (623)
|+-.+.++.. +.++. +++.+++|||+. +|+|||+||+|.+|+.-|++|+.|||+.+.......
T Consensus 136 -gDc~tllk~~----g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 -GDCATLLKNI----GPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred -chhhhhcccC----CCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 5666666432 22221 227799999999 999999999999999999999999999986321100
Q ss_pred ---------ccccccc-CCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcccccc
Q 006982 463 ---------HLSTFVN-GEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG 522 (623)
Q Consensus 463 ---------~~~~~~~-~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~~~~~~~~~~ 522 (623)
....+.+ ..+||+.|+|||++....|...+|.|++|+|+||.+.|+.||.+++.++.+..
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~ 269 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 269 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh
Confidence 0011222 24799999999999999999999999999999999999999998766554443
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=1.3e-16 Score=164.78 Aligned_cols=126 Identities=27% Similarity=0.368 Sum_probs=107.3
Q ss_pred eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccc
Q 006982 374 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGL 453 (623)
Q Consensus 374 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgl 453 (623)
..++.|+++...+|.++|.... .....+|...+.++.|++.|+.| + +.+|+|+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 4679999999999999996544 34667889999999999999999 5 899999999999999999999999999
Q ss_pred ccccCCCCCc--ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHh
Q 006982 454 ARLMNPIDTH--LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVT 506 (623)
Q Consensus 454 a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ellt 506 (623)
.......... .........||..||+||.+.+..|+.|+||||+|+||+|+++
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 9876543311 1112234569999999999999999999999999999999997
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=8.3e-15 Score=133.56 Aligned_cols=135 Identities=19% Similarity=0.140 Sum_probs=114.6
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCC--CCCcceeEEEEeCCeeeEEEecCCCCCH
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKN--RNLVPLLGFCMAKKERLLVYKHMPNGSL 387 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL 387 (623)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..+..++| .++++++++....+..++++||++++.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 4679999999999999865 7889998866543 5678899999999977 5888898888877889999999998777
Q ss_pred hhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 388 YDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 388 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
..+ +......++.+++++++++|.....+++|+|++|+||++++.+.+++.|||.+...
T Consensus 81 ~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 544 45667788999999999999864457999999999999999999999999998753
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=3.7e-15 Score=141.87 Aligned_cols=135 Identities=20% Similarity=0.214 Sum_probs=96.9
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccH---HH----------------------HHHHHHHhCCCCCCC--C
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE---KE----------------------FVAEMATLGSVKNRN--L 362 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~----------------------~~~e~~~l~~l~h~n--i 362 (623)
.+.||+|+||.||+|...+++.||+|++....... .. ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999886532211 11 124555555554332 3
Q ss_pred cceeEEEEeCCeeeEEEecCCCCCHhhh-ccCCCCCCCccChHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCceee
Q 006982 363 VPLLGFCMAKKERLLVYKHMPNGSLYDL-LHPADDTGKSVDWPRRLKIAIGAARGFAWLHH-NCNPRIIHRNISSKCILL 440 (623)
Q Consensus 363 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~-~~~~~i~H~dlk~~NILl 440 (623)
.+.+++ ...++||||++++++... +... ... .....++.+++.++.++|. . +|+|+||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----RLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh-----hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 333332 245899999999654321 1100 011 5567899999999999999 7 99999999999999
Q ss_pred CCCCCeEEeecccccccC
Q 006982 441 DDDFEPKISDFGLARLMN 458 (623)
Q Consensus 441 ~~~~~~kl~Dfgla~~~~ 458 (623)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8999999999997653
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.54 E-value=4.7e-14 Score=139.13 Aligned_cols=134 Identities=16% Similarity=0.229 Sum_probs=104.7
Q ss_pred cceee-ccCccEEEEEEeCCCcEEEEEEecccc--------------ccHHHHHHHHHHhCCCCCCCC--cceeEEEEeC
Q 006982 310 NNIIG-SGRTGTMYKALLEDGTSLMVKRLQDSQ--------------RSEKEFVAEMATLGSVKNRNL--VPLLGFCMAK 372 (623)
Q Consensus 310 ~~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 372 (623)
..+|| .|+.|+||++... +..+++|++.... .....+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999886 6778888774311 123457889999999998875 6677765433
Q ss_pred C----eeeEEEecCCC-CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 373 K----ERLLVYKHMPN-GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 373 ~----~~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
. ..++|+||+++ .+|.+++.. ..++.. .+.+++.++.+||+. ||+||||||.|||++.++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 2 23599999997 699998853 223332 357899999999999 999999999999999999999
Q ss_pred Eeecccccc
Q 006982 448 ISDFGLARL 456 (623)
Q Consensus 448 l~Dfgla~~ 456 (623)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998875
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=1.3e-14 Score=141.11 Aligned_cols=162 Identities=24% Similarity=0.316 Sum_probs=121.7
Q ss_pred HHHHHhCCCCCCCCcceeEEEEeCC-----eeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhc
Q 006982 349 AEMATLGSVKNRNLVPLLGFCMAKK-----ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHN 423 (623)
Q Consensus 349 ~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~ 423 (623)
.-+.-+-++.|.|+|+++.|+.+.. +..+++|||..|++..+|+........+....-.++..||..||.|||+
T Consensus 116 ~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs- 194 (458)
T KOG1266|consen 116 AVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS- 194 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-
Confidence 3445566678999999999987643 3578999999999999998765555667667778899999999999998
Q ss_pred CCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCc-ccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHH
Q 006982 424 CNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTH-LSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLL 502 (623)
Q Consensus 424 ~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~ 502 (623)
|.|+|+|+++..+-|++..++-+|+.--... ...+.... ....-....+-++|.+||+-.....+..+|||+||...+
T Consensus 195 ~~PpiihgnlTc~tifiq~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 195 CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL 273 (458)
T ss_pred cCCccccCCcchhheeecCCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence 6889999999999999999998888532111 11110000 000001123568999999988888889999999999999
Q ss_pred HHHhCCCCCC
Q 006982 503 ELVTGERPTN 512 (623)
Q Consensus 503 elltg~~P~~ 512 (623)
||..+..-..
T Consensus 274 emailEiq~t 283 (458)
T KOG1266|consen 274 EMAILEIQST 283 (458)
T ss_pred HHHHheeccC
Confidence 9998876543
No 437
>PLN03150 hypothetical protein; Provisional
Probab=99.46 E-value=6.8e-14 Score=156.68 Aligned_cols=93 Identities=42% Similarity=0.673 Sum_probs=89.1
Q ss_pred CCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccccccc
Q 006982 105 SMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSV 184 (623)
Q Consensus 105 ~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l 184 (623)
.++.|+|++|.|+|.+|.+++.+.+ |+.|+|++|+|+|.+|..++++++|+.|+|++|+|+|.+|..++++++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~-L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRH-LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCC-CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 5889999999999999999999755 999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCcccc
Q 006982 185 ANNLLSGSIPTFVN 198 (623)
Q Consensus 185 ~~N~l~g~ip~~~~ 198 (623)
++|+|+|.+|..+.
T Consensus 498 s~N~l~g~iP~~l~ 511 (623)
T PLN03150 498 NGNSLSGRVPAALG 511 (623)
T ss_pred cCCcccccCChHHh
Confidence 99999999998765
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=1.1e-12 Score=140.63 Aligned_cols=144 Identities=20% Similarity=0.234 Sum_probs=100.9
Q ss_pred cCcccceeeccCccEEEEEEeCCCcEEEEEEecccccc-----------------------------------------H
Q 006982 306 SFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS-----------------------------------------E 344 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------------------------~ 344 (623)
.|+ .+.||.|++|+||+|++++|+.||||+.+..... +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 444 3689999999999999999999999998543100 0
Q ss_pred HHHHHHHHHhCCC----CCCCCcceeEEE-EeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHH-HHH
Q 006982 345 KEFVAEMATLGSV----KNRNLVPLLGFC-MAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAAR-GFA 418 (623)
Q Consensus 345 ~~~~~e~~~l~~l----~h~niv~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~-~l~ 418 (623)
-.|..|.+.+.++ +|.+-+.+-.++ ......++||||++|++|.++...... .. .+.+++..++. .+.
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~---~~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA---GL---DRKALAENLARSFLN 271 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc---CC---CHHHHHHHHHHHHHH
Confidence 0133444444444 233323332333 234567999999999999887642211 11 24556766666 467
Q ss_pred HHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 419 WLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 419 yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
.+|.. +++|+|++|.||++++++.++++|||++..+.+
T Consensus 272 ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 272 QVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88888 999999999999999999999999999987653
No 439
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=1.5e-13 Score=151.90 Aligned_cols=204 Identities=25% Similarity=0.326 Sum_probs=158.7
Q ss_pred cCcccceeeccCccEEEEEEeCC--CcEEEEEEeccccc---cHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEE
Q 006982 306 SFSKNNIIGSGRTGTMYKALLED--GTSLMVKRLQDSQR---SEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 306 ~f~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 379 (623)
.|...+-||+|.|+.|-...... ...+++|.+..... .......|..+-..+. |+|++.+++...+.+..++++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 45556779999999998877533 34466666644332 2333445777766665 999999999999999999999
Q ss_pred ecCCCCCHhhhc-cCCCCCCCccChHHHHHHHHHHHHHHHHHH-hcCCCCcEecCCCCCceeeCCCC-CeEEeecccccc
Q 006982 380 KHMPNGSLYDLL-HPADDTGKSVDWPRRLKIAIGAARGFAWLH-HNCNPRIIHRNISSKCILLDDDF-EPKISDFGLARL 456 (623)
Q Consensus 380 e~~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH-~~~~~~i~H~dlk~~NILl~~~~-~~kl~Dfgla~~ 456 (623)
+|..+|++.+.+ +... ...+-........|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|..
T Consensus 101 ~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred CcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 999999999998 4221 13445566778899999999999 77 999999999999999999 999999999987
Q ss_pred cCCCCCcccccccCCCC-cccccCcccccCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 006982 457 MNPIDTHLSTFVNGEFG-DLGYVAPEYARTL-VATPKGDVYSFGTVLLELVTGERPTNVAKA 516 (623)
Q Consensus 457 ~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~k~DV~sfGvil~elltg~~P~~~~~~ 516 (623)
...... .........| ++.|+|||...+. ......|+||.|+++.-+++|..|+.....
T Consensus 175 ~~~~~g-~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~ 235 (601)
T KOG0590|consen 175 YRNKNG-AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSR 235 (601)
T ss_pred ccccCC-cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccc
Confidence 755211 1223344567 9999999999874 446789999999999999999999876543
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=1.4e-11 Score=115.18 Aligned_cols=130 Identities=15% Similarity=0.124 Sum_probs=97.0
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCCCcc-eeEEEEeCCeeeEEEecCCCCCHhh
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRNLVP-LLGFCMAKKERLLVYKHMPNGSLYD 389 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lV~e~~~~gsL~~ 389 (623)
+.++.|.++.||++... +..+++|...........+..|++++..+.+.++++ ++.+ .....++||||+++.++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcccc
Confidence 56888999999999875 778999987655433345678899988886665554 4433 2334689999999988764
Q ss_pred hccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC--CCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 390 LLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC--NPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 390 ~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~--~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
.- . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++||+.+..
T Consensus 81 ~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 ED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 31 0 11245678999999999982 22369999999999999 66899999998864
No 441
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.27 E-value=5.4e-13 Score=118.33 Aligned_cols=113 Identities=23% Similarity=0.353 Sum_probs=101.5
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
...++.|.|++|.++ .+|+.|..|.+|+.|+|++|++. .+|.+++++.+ |+.|+++-|++. .+|..||+++.|+.|
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~k-lr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPK-LRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchh-hhheecchhhhh-cCccccCCCchhhhh
Confidence 357889999999998 68889999999999999999999 89999999765 999999999999 899999999999999
Q ss_pred eccCCcCCC-CCCccccccccccccccccccccccCCc
Q 006982 159 KLDHNRFSG-QIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 159 ~l~~N~~~g-~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
||.+|+++- .+|..+..+..|+.|+|++|.|.-..|+
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~d 145 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPD 145 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCChh
Confidence 999999974 5788888899999999999998754443
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=5.6e-12 Score=136.65 Aligned_cols=146 Identities=18% Similarity=0.241 Sum_probs=93.8
Q ss_pred hccCcccceeeccCccEEEEEEeCC-CcEEEEEEecccccc-----------------------------------HH--
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLED-GTSLMVKRLQDSQRS-----------------------------------EK-- 345 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-----------------------------------~~-- 345 (623)
..+|+. +.||+|++|+||+|++++ |+.||||+....... .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999987 999999998643100 01
Q ss_pred ----HHHHHHHHhCCCC----CCCCcceeEEEEe-CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHH
Q 006982 346 ----EFVAEMATLGSVK----NRNLVPLLGFCMA-KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416 (623)
Q Consensus 346 ----~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~ 416 (623)
++.+|...+.+++ +.+.+.+-.++.+ ....++||||++|+.+.+.-.... ...+ +..++...+..
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~---~g~d---~~~la~~~v~~ 271 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA---AGTD---MKLLAERGVEV 271 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh---cCCC---HHHHHHHHHHH
Confidence 1333444433332 3333443333333 456789999999999987521111 1111 11222222221
Q ss_pred -HHHHHhcCCCCcEecCCCCCceeeCCCC----CeEEeecccccccCC
Q 006982 417 -FAWLHHNCNPRIIHRNISSKCILLDDDF----EPKISDFGLARLMNP 459 (623)
Q Consensus 417 -l~yLH~~~~~~i~H~dlk~~NILl~~~~----~~kl~Dfgla~~~~~ 459 (623)
+..+... +++|+|+||.||+++.++ .+++.|||++..+++
T Consensus 272 ~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 FFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2223345 999999999999999888 999999999987754
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=5.1e-11 Score=126.08 Aligned_cols=200 Identities=22% Similarity=0.231 Sum_probs=153.8
Q ss_pred cCcccceeec--cCccEEEEEEe---CCCcEEEEEEecccc---ccHHHHHHHHHHhCCC-CCCCCcceeEEEEeCCeee
Q 006982 306 SFSKNNIIGS--GRTGTMYKALL---EDGTSLMVKRLQDSQ---RSEKEFVAEMATLGSV-KNRNLVPLLGFCMAKKERL 376 (623)
Q Consensus 306 ~f~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 376 (623)
.|.....+|+ |.+|.||.+.. .++..+++|+-+... .....=.+|+....++ .|+|.++....+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3566778999 99999999986 467888888743321 2233345677777777 5999999888888889999
Q ss_pred EEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHH----HHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeec
Q 006982 377 LVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAAR----GFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDF 451 (623)
Q Consensus 377 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~----~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Df 451 (623)
+-+|++. .+|.++-+... ..++....+.+..+... |+.++|+. .++|-|+||.||++..+ ...+++||
T Consensus 195 iqtE~~~-~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999885 68888876432 33555556666666666 99999999 99999999999999999 89999999
Q ss_pred ccccccCCCCCcccccccCC-CCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 006982 452 GLARLMNPIDTHLSTFVNGE-FGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNV 513 (623)
Q Consensus 452 gla~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P~~~ 513 (623)
|+...+.............+ .|...|++||...+ .++...|+|++|.+..|..++..+...
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccC
Confidence 99998876543332222222 47788999998865 458899999999999999998777643
No 444
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.15 E-value=2.9e-12 Score=113.75 Aligned_cols=113 Identities=27% Similarity=0.463 Sum_probs=87.1
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCC-CCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYG-PLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
++..|++.=|.|. .+|..||.++.|+.|||+.|+++- .+|..++.+.. |+.|+|+.|.|. .+|+.++++++|+.|.
T Consensus 80 klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~t-lralyl~dndfe-~lp~dvg~lt~lqil~ 156 (264)
T KOG0617|consen 80 KLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTT-LRALYLGDNDFE-ILPPDVGKLTNLQILS 156 (264)
T ss_pred hhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHH-HHHHHhcCCCcc-cCChhhhhhcceeEEe
Confidence 3444455444443 567778888888888888877764 57777777665 888888888888 7888889999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
+..|.+- ++|.+++.++.|+.|++.+|.++-..|...
T Consensus 157 lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~ 193 (264)
T KOG0617|consen 157 LRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELA 193 (264)
T ss_pred eccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhh
Confidence 9888888 789999999999999999999886666543
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.14 E-value=2e-11 Score=121.94 Aligned_cols=109 Identities=33% Similarity=0.533 Sum_probs=90.6
Q ss_pred EEEEEecCCCc-----------------------eeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccC
Q 006982 82 VLNLRLTDMGL-----------------------KGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSS 138 (623)
Q Consensus 82 v~~l~l~~~~l-----------------------~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~ 138 (623)
|+.++++.|++ .+.+|..+..+++|..|+|++|-+. .+|.+++.+.. |+.||||+
T Consensus 390 Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~-Lq~LnlS~ 467 (565)
T KOG0472|consen 390 VTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVR-LQTLNLSF 467 (565)
T ss_pred eEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhh-hheecccc
Confidence 88888887754 3567788899999999999999999 89999999876 99999999
Q ss_pred ccCCCCCCC-----------------------C-CCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCC
Q 006982 139 NNFSGSIPS-----------------------N-LANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIP 194 (623)
Q Consensus 139 N~l~g~ip~-----------------------~-~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip 194 (623)
|+|. .+|. + +.++.+|.+|||.+|.+. +||+.+|+|++|++|.+++|.|+ .|
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr--~P 543 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR--QP 543 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC--CC
Confidence 9887 4553 2 667888888888888888 78888888888888888888887 55
Q ss_pred cc
Q 006982 195 TF 196 (623)
Q Consensus 195 ~~ 196 (623)
+.
T Consensus 544 r~ 545 (565)
T KOG0472|consen 544 RH 545 (565)
T ss_pred HH
Confidence 43
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=5.5e-10 Score=109.07 Aligned_cols=141 Identities=19% Similarity=0.258 Sum_probs=110.5
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccc--cHHHHHHHHHHhCCCCCC--CCcceeEEEEeCC---eeeEEEecCC
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR--SEKEFVAEMATLGSVKNR--NLVPLLGFCMAKK---ERLLVYKHMP 383 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~---~~~lV~e~~~ 383 (623)
+.|+.|..+.||++...+|..+++|....... ....+..|.+++..+++. ++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999998765433 355788999999988763 4566777766542 5689999999
Q ss_pred CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 006982 384 NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNC--------------------------------------- 424 (623)
Q Consensus 384 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~--------------------------------------- 424 (623)
+.++.+.+.. ..++..++..++.++++.|.+||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9988876531 34677778888889999999988531
Q ss_pred --------------CCCcEecCCCCCceeeCC--CCCeEEeecccccc
Q 006982 425 --------------NPRIIHRNISSKCILLDD--DFEPKISDFGLARL 456 (623)
Q Consensus 425 --------------~~~i~H~dlk~~NILl~~--~~~~kl~Dfgla~~ 456 (623)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 66789999998864
No 447
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.10 E-value=3.6e-12 Score=127.12 Aligned_cols=112 Identities=23% Similarity=0.313 Sum_probs=94.5
Q ss_pred eeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCC-CCCCCceeeccCCcCCCCCCcc
Q 006982 94 GQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLA-NCTYLNSLKLDHNRFSGQIPPQ 172 (623)
Q Consensus 94 g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~-~l~~L~~l~l~~N~~~g~iP~~ 172 (623)
+++|+++|.+.+|.-|||..|++. .+| +|..+.. |..|+++.|++. .+|.+.+ ++++|.+|||.+|++. ++|++
T Consensus 196 ~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~-L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde 270 (565)
T KOG0472|consen 196 ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSL-LKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDE 270 (565)
T ss_pred hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHH-HHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchH
Confidence 578888888888888888888888 777 6766544 888888888888 7888766 8999999999999999 89999
Q ss_pred ccccccccccccccccccccCCccccccccccccCCCC
Q 006982 173 LGQLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNNQ 210 (623)
Q Consensus 173 l~~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 210 (623)
+.-+.+|..||+|+|.+++-.|+.-++.+....+.|||
T Consensus 271 ~clLrsL~rLDlSNN~is~Lp~sLgnlhL~~L~leGNP 308 (565)
T KOG0472|consen 271 ICLLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNP 308 (565)
T ss_pred HHHhhhhhhhcccCCccccCCcccccceeeehhhcCCc
Confidence 99999999999999999988887666667777778876
No 448
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.08 E-value=6.8e-10 Score=118.71 Aligned_cols=165 Identities=15% Similarity=0.207 Sum_probs=121.4
Q ss_pred eCCCcEEEEEEeccccc-cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChH
Q 006982 326 LEDGTSLMVKRLQDSQR-SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWP 404 (623)
Q Consensus 326 ~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~ 404 (623)
..++.+|.|...+.... ......+-++.|+.+|||||++++..++.....|+|+|-+. .|..+++. +.-.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hHHH
Confidence 45778888877765443 23446678888999999999999999999999999999885 35555532 2233
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccCCCCcccccCccccc
Q 006982 405 RRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAR 484 (623)
Q Consensus 405 ~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 484 (623)
.....+.||+.||.|||+.| +++|+++.-..|+|++.|+.||++|.++.......... ....--..|..|+.+.
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~----~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA----KSLYLIESFDDPEEID 178 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc----ccchhhhcccChhhcC
Confidence 44557889999999999877 89999999999999999999999999887543322100 0001122455665443
Q ss_pred CCCCCcchhHHHHHHHHHHHHhC
Q 006982 485 TLVATPKGDVYSFGTVLLELVTG 507 (623)
Q Consensus 485 ~~~~s~k~DV~sfGvil~elltg 507 (623)
... -..|.|.||++++|++.|
T Consensus 179 ~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccc--cchhhhhHHHHHHHHhCc
Confidence 222 346999999999999999
No 449
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.08 E-value=1.2e-09 Score=103.22 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=97.7
Q ss_pred cceeeccCccEEEEEEeCC-------CcEEEEEEecccc-----------------------ccHHHH----HHHHHHhC
Q 006982 310 NNIIGSGRTGTMYKALLED-------GTSLMVKRLQDSQ-----------------------RSEKEF----VAEMATLG 355 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-----------------------~~~~~~----~~e~~~l~ 355 (623)
...||.|.-+.||.|...+ +..+|+|+.+.+. ...+.+ ++|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 4789999874210 001122 37999998
Q ss_pred CCCC--CCCcceeEEEEeCCeeeEEEecCCCCCHhh-hccCCCCCCCccChHHHHHHHHHHHHHHHHH-HhcCCCCcEec
Q 006982 356 SVKN--RNLVPLLGFCMAKKERLLVYKHMPNGSLYD-LLHPADDTGKSVDWPRRLKIAIGAARGFAWL-HHNCNPRIIHR 431 (623)
Q Consensus 356 ~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yL-H~~~~~~i~H~ 431 (623)
++.. -++..++++ ...++||||+.+..+.. .++. ..++..+...+..++..+|.+| |.. +++|+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHG 149 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHA 149 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 8854 456666654 56789999997754422 2211 2234445667789999999999 677 99999
Q ss_pred CCCCCceeeCCCCCeEEeecccccccC
Q 006982 432 NISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 432 dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
||++.||++++ +.+.|+|||.+....
T Consensus 150 DLs~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEEC-CcEEEEECCCceeCC
Confidence 99999999974 679999999987654
No 450
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.4e-09 Score=99.24 Aligned_cols=130 Identities=20% Similarity=0.277 Sum_probs=99.4
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEE-eccccc--------cHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEEec
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKR-LQDSQR--------SEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVYKH 381 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~-~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 381 (623)
..+++|+-+.+|.+.+.+.. +++|. +.+... ......+|++++.+++---|....-+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999876444 55553 333221 123467899999988766665566667778888999999
Q ss_pred CCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 382 MPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 382 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
++|-.|.+.+... +..++..+-+-+.-||.. +|+|+||.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888532 245666777777889999 999999999999998875 99999999975
No 451
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.96 E-value=1.3e-10 Score=121.73 Aligned_cols=80 Identities=26% Similarity=0.394 Sum_probs=38.1
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeecc
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLD 161 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~ 161 (623)
++.|||++|+|. ..|..+.+-.++-.|+||+|++. +||..++-.+..|-+||||+|++. .+|+++..|..|++|+|+
T Consensus 105 Lt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls 181 (1255)
T KOG0444|consen 105 LTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLS 181 (1255)
T ss_pred ceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcC
Confidence 445555555554 34444444444555555555554 444443321222445555555554 445555555555555555
Q ss_pred CCc
Q 006982 162 HNR 164 (623)
Q Consensus 162 ~N~ 164 (623)
+|.
T Consensus 182 ~NP 184 (1255)
T KOG0444|consen 182 NNP 184 (1255)
T ss_pred CCh
Confidence 544
No 452
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.91 E-value=1.3e-10 Score=121.86 Aligned_cols=106 Identities=34% Similarity=0.487 Sum_probs=84.0
Q ss_pred cEEEEEecCCCcee-eCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCC-CCCCCCCcee
Q 006982 81 RVLNLRLTDMGLKG-QFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSN-LANCTYLNSL 158 (623)
Q Consensus 81 ~v~~l~l~~~~l~g-~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~-~~~l~~L~~l 158 (623)
++.++.+.+|+|.. -||+.|-.|..|+.||||+|+|. ..|..+-.. +++-.|+||+|++. +||.. +.+|+-|-.|
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~A-Kn~iVLNLS~N~Ie-tIPn~lfinLtDLLfL 155 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYA-KNSIVLNLSYNNIE-TIPNSLFINLTDLLFL 155 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhh-cCcEEEEcccCccc-cCCchHHHhhHhHhhh
Confidence 45556666676653 47888888888888888888888 788888774 44888888888888 78876 4578888888
Q ss_pred eccCCcCCCCCCcccccccccccccccccccc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
|||+|++. .+|+++-.|..|++|.|++|.|.
T Consensus 156 DLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 156 DLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred ccccchhh-hcCHHHHHHhhhhhhhcCCChhh
Confidence 88888888 78888888888888888888764
No 453
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.89 E-value=1.6e-08 Score=91.81 Aligned_cols=142 Identities=18% Similarity=0.255 Sum_probs=103.3
Q ss_pred ccceeeccCccEEEEEEeCCCcEEEEE-Eecccc--------ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeEEE
Q 006982 309 KNNIIGSGRTGTMYKALLEDGTSLMVK-RLQDSQ--------RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLLVY 379 (623)
Q Consensus 309 ~~~~lG~G~~g~Vy~~~~~~~~~vavK-~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 379 (623)
...++-+|+-+.|+++.+. |+..++| ++.+.. -..++..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 3578899999999999986 5555555 443322 12456778999999887666665566677777788999
Q ss_pred ecCCC-CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC---eEEeeccccc
Q 006982 380 KHMPN-GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE---PKISDFGLAR 455 (623)
Q Consensus 380 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~---~kl~Dfgla~ 455 (623)
||+++ -++.+++...-.. ...-......+..+-+.+.-||.. .|+|+||..+||++..++. +.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~--~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED--ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccC--cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99977 4777777532211 111222256788888889999999 9999999999999965443 5899999986
Q ss_pred c
Q 006982 456 L 456 (623)
Q Consensus 456 ~ 456 (623)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
No 454
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89 E-value=1.1e-09 Score=116.16 Aligned_cols=195 Identities=17% Similarity=0.172 Sum_probs=145.7
Q ss_pred HHhccCcccceeeccCccEEEEEEe--CCCcEEEEEEecccccc---HHHHHHHHHHhCCC-CCCCCcceeEEEEeCCee
Q 006982 302 KATNSFSKNNIIGSGRTGTMYKALL--EDGTSLMVKRLQDSQRS---EKEFVAEMATLGSV-KNRNLVPLLGFCMAKKER 375 (623)
Q Consensus 302 ~~~~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 375 (623)
....+|.....||.|.|+.|++... .++..+++|.+...-.. ...-..|+.+...+ .|.+++.....+......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3345788888999999999999774 46788999987654321 11123455554444 588888877777777777
Q ss_pred eEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCC-CCeEEeecccc
Q 006982 376 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDD-FEPKISDFGLA 454 (623)
Q Consensus 376 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~-~~~kl~Dfgla 454 (623)
++--||++++++...+. ....++...++++..+++.++.++|+. .++|+|+||+||++..+ +..++.|||.+
T Consensus 342 ~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccc
Confidence 88899999999887762 335678888999999999999999988 99999999999999875 88999999999
Q ss_pred cccCCCCCcccccccCCCCccccc--CcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 006982 455 RLMNPIDTHLSTFVNGEFGDLGYV--APEYARTLVATPKGDVYSFGTVLLELVTGERP 510 (623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~k~DV~sfGvil~elltg~~P 510 (623)
..+..... .. ...-++. +++......+..+.|+||||.-+.|.+++..-
T Consensus 415 t~~~~~~~---~~----~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 415 TRLAFSSG---VF----HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred cccceecc---cc----cccccccccchhhccccccccccccccccccccccccCccc
Confidence 75321111 00 0222333 55555666778899999999999999988754
No 455
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.88 E-value=1.9e-08 Score=113.90 Aligned_cols=156 Identities=27% Similarity=0.415 Sum_probs=104.2
Q ss_pred HHhhccCCCHHHHHHHHHHHHHcCCCCCc--ccCCCCCCCCCCCCCCcccc----------------eeecCCC------
Q 006982 23 LCFSLSYGTKEDLACLKSIKDSLEDPFNY--LNSSWNFNNDTEGFICKFTG----------------VECWHPD------ 78 (623)
Q Consensus 23 ~~~~~~~~~~~d~~~Ll~~k~~~~~~~~~--l~~sW~~~~~~~~~~c~w~g----------------v~c~~~~------ 78 (623)
+|......+.+|...++++.+.+..|... ....|++.++ +|.-.. |.|....
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~----fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~ 128 (754)
T PRK15370 53 LCHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGADQ----YCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRV 128 (754)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCCc----ccccCCcchhhheeeecCCceEEecCCCccccccc
Confidence 34455567889999999999999887632 1123876554 564322 5663211
Q ss_pred ------------------------------------------------CCcEEEEEecCCCceeeCCccccCCCCCCEEE
Q 006982 79 ------------------------------------------------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLD 110 (623)
Q Consensus 79 ------------------------------------------------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~ 110 (623)
....+.|+|++++|+ .+|..+. ++|+.|+
T Consensus 129 ~g~~~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~ 205 (754)
T PRK15370 129 TESEQASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLI 205 (754)
T ss_pred ccccccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEE
Confidence 011457888888887 4676553 4788888
Q ss_pred cCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccccccccccccccccccc
Q 006982 111 LSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 111 L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
|++|+|+ .+|..+. ++|+.|+|++|+|+ .||..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+
T Consensus 206 Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 206 LDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS 275 (754)
T ss_pred ecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC
Confidence 8888888 6787664 24888888888888 6776543 36777777777777 6776653 46777777777777
Q ss_pred ccCCcc
Q 006982 191 GSIPTF 196 (623)
Q Consensus 191 g~ip~~ 196 (623)
.+|..
T Consensus 276 -~LP~~ 280 (754)
T PRK15370 276 -CLPEN 280 (754)
T ss_pred -ccccc
Confidence 35543
No 456
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.84 E-value=1.6e-07 Score=95.28 Aligned_cols=267 Identities=15% Similarity=0.166 Sum_probs=155.1
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCC-CCCCCcceeEEE------EeCCe-eeEEEec
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSV-KNRNLVPLLGFC------MAKKE-RLLVYKH 381 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~------~~~~~-~~lV~e~ 381 (623)
..-||+|+-+.+|..---. ..+.|+........+. +.++.|.+. .||-+-.-+.+= -+... .-+.|..
T Consensus 16 gr~LgqGgea~ly~l~e~~--d~VAKIYh~Pppa~~a--qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~ 91 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVR--DQVAKIYHAPPPAAQA--QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK 91 (637)
T ss_pred CccccCCccceeeecchhh--chhheeecCCCchHHH--HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence 5679999999999753211 1234666554322221 223344444 455433212221 11122 4467777
Q ss_pred CCCCC-HhhhccCC--CCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 382 MPNGS-LYDLLHPA--DDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 382 ~~~gs-L~~~l~~~--~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
+++.. ..+++... +..-...+|+..++.+..+|.+.+-||.. |..-+|+.++|+|+.+++.+.+.|-.......
T Consensus 92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ 168 (637)
T COG4248 92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA 168 (637)
T ss_pred CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceeecc
Confidence 66542 22222211 11124579999999999999999999999 99999999999999999999998865443322
Q ss_pred CCCCcccccccCCCCcccccCccccc-----CCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCcccccccHHHHHHHH-
Q 006982 459 PIDTHLSTFVNGEFGDLGYVAPEYAR-----TLVATPKGDVYSFGTVLLELVTG-ERPTNVAKAPETFKGNLVEWIAQL- 531 (623)
Q Consensus 459 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DV~sfGvil~elltg-~~P~~~~~~~~~~~~~l~~~~~~~- 531 (623)
. +. .....+|...|.+||... +..-+...|-|.+||++++++.| ++||.+.........-...-+...
T Consensus 169 n-g~----~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 169 N-GT----LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred C-Cc----eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 1 11 122345889999999765 33456789999999999999886 999976432211111111000000
Q ss_pred -hccCc--hhhhhc-hhhhcCCCHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhccc
Q 006982 532 -SSTGQ--LQDAID-KCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERY 590 (623)
Q Consensus 532 -~~~~~--~~~~~d-~~l~~~~~~~~~~~~~~~~~~C~~~~~P~~RPs~~ev~~~L~~i~~~~ 590 (623)
....+ ....-- ..+....-+..+..++..+..-- .++.-|||++-.+..|.+++.+.
T Consensus 244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~--~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTES--GVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred eeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhccc--CCCCCCCCHHHHHHHHHHHHHhh
Confidence 00000 000000 00000112344555555544421 34779999999999998876653
No 457
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=98.84 E-value=3.1e-10 Score=118.43 Aligned_cols=114 Identities=25% Similarity=0.211 Sum_probs=93.8
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|+|..|+++..-..++-+|++|+.||||+|.+...-++++.- +++|+.||||+|+++---|..|.-|..|+.|+|
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf-tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF-TQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh-cccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 4677888888888777778889999999999999999767777766 456999999999999444456888888999999
Q ss_pred cCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
++|.++-.--..|-.+++|+.|||++|.+++.|.+
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 99998855555677788999999999999888875
No 458
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.82 E-value=4.1e-10 Score=123.44 Aligned_cols=127 Identities=26% Similarity=0.360 Sum_probs=95.2
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.+..|.|.+|.|+...=+-|-+..+|+.|+|++|+|. ++|+....-...|+.|+||+|.|+ .||..+.++..|++|..
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 4667788888888777777888888888888888888 788765444455888888888888 78888888888888888
Q ss_pred cCCcCCCCCCccccccccccccccccccccc-cCCcccc-ccccccccCCCCC
Q 006982 161 DHNRFSGQIPPQLGQLGRLKSFSVANNLLSG-SIPTFVN-LTLSADSVTNNQG 211 (623)
Q Consensus 161 ~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g-~ip~~~~-~~~~~~~~~~n~~ 211 (623)
.+|++. .+| ++.+++.|+.+|||.|+|+- .+|.... -++....++||.+
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 888888 677 78888888888888888864 3343222 2455566666664
No 459
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.79 E-value=1e-07 Score=95.16 Aligned_cols=140 Identities=14% Similarity=0.101 Sum_probs=100.0
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccc------------cHHHHHHHHHHhCCCCCC--CCcceeEEEEe-----
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQR------------SEKEFVAEMATLGSVKNR--NLVPLLGFCMA----- 371 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~h~--niv~l~~~~~~----- 371 (623)
+.+-+-....|++..+ +|+.+.||+...... ....+.+|.+.+.++... ....++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444445667666 577899997743221 112477888888888443 34455666643
Q ss_pred CCeeeEEEecCCCC-CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCC-------C
Q 006982 372 KKERLLVYKHMPNG-SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD-------D 443 (623)
Q Consensus 372 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~-------~ 443 (623)
....++|+|++++- +|.+++.... ....+...+..++.+++..+.-||.. ||+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23468999999986 8999874221 12345566778999999999999999 9999999999999975 5
Q ss_pred CCeEEeecccccc
Q 006982 444 FEPKISDFGLARL 456 (623)
Q Consensus 444 ~~~kl~Dfgla~~ 456 (623)
..+.++||+.+..
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6899999998864
No 460
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.77 E-value=6.6e-09 Score=72.62 Aligned_cols=41 Identities=37% Similarity=0.648 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHcCC-CCCcccCCCCCCCCCCCCCCcccceeec
Q 006982 32 KEDLACLKSIKDSLED-PFNYLNSSWNFNNDTEGFICKFTGVECW 75 (623)
Q Consensus 32 ~~d~~~Ll~~k~~~~~-~~~~l~~sW~~~~~~~~~~c~w~gv~c~ 75 (623)
++|++||++||+++.+ |...+ .+|+.+. ..+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l-~~W~~~~--~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVL-SSWNPSS--DSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCC-TT--TT----S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCccc-ccCCCcC--CCCCeeeccEEeC
Confidence 5799999999999985 54444 6998653 2469999999994
No 461
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.77 E-value=3.7e-08 Score=92.74 Aligned_cols=125 Identities=20% Similarity=0.234 Sum_probs=82.6
Q ss_pred EEEEEEeCCCcEEEEEEecccc--------------c-------------cHHHHHHHHHHhCCCCCC--CCcceeEEEE
Q 006982 320 TMYKALLEDGTSLMVKRLQDSQ--------------R-------------SEKEFVAEMATLGSVKNR--NLVPLLGFCM 370 (623)
Q Consensus 320 ~Vy~~~~~~~~~vavK~~~~~~--------------~-------------~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 370 (623)
.||.|...+|..+|+|..+... . ......+|.+.|.++..- ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 3899999999999999874210 0 013356899999999765 45556544
Q ss_pred eCCeeeEEEecCC--CCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHH-HhcCCCCcEecCCCCCceeeCCCCCeE
Q 006982 371 AKKERLLVYKHMP--NGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWL-HHNCNPRIIHRNISSKCILLDDDFEPK 447 (623)
Q Consensus 371 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yL-H~~~~~~i~H~dlk~~NILl~~~~~~k 447 (623)
....+||||++ |..+..+.. ..++......++.++...+..+ |.. +|+|+|+.+.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~------~~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKD------VDLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHH------CGGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhhHHh------ccccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 24579999998 545544332 1111334566777888866665 566 99999999999999988 999
Q ss_pred EeecccccccC
Q 006982 448 ISDFGLARLMN 458 (623)
Q Consensus 448 l~Dfgla~~~~ 458 (623)
|+|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999887643
No 462
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.76 E-value=4.7e-09 Score=118.16 Aligned_cols=56 Identities=32% Similarity=0.433 Sum_probs=27.1
Q ss_pred CCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 131 LTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 131 L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
|+.|+|++|+|+ .+|.. .++|+.|+|++|+|+ .+|... .+|+.|+|++|+|+ .+|.
T Consensus 384 L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~ 439 (788)
T PRK15387 384 LKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPE 439 (788)
T ss_pred cceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccCh
Confidence 555555555555 34432 234555555555555 244321 23445555555554 3443
No 463
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.75 E-value=5.2e-09 Score=96.96 Aligned_cols=104 Identities=29% Similarity=0.384 Sum_probs=31.3
Q ss_pred cEEEEEecCCCceeeCCcccc-CCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCC-CCCCCCcee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIR-NCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNL-ANCTYLNSL 158 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~-~~l~~L~~l 158 (623)
+...|+|.+|.++- | ..++ .|.+|+.|||++|.++ .++ .+..+. .|+.|+|++|+++ .++..+ ..+++|++|
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~-~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLP-RLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----T-T--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChh-hhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 45667777776653 2 2455 4667777777777777 454 344443 3777777777777 454434 246777777
Q ss_pred eccCCcCCCCC-Ccccccccccccccccccccc
Q 006982 159 KLDHNRFSGQI-PPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 159 ~l~~N~~~g~i-P~~l~~l~~L~~l~l~~N~l~ 190 (623)
+|++|++...- =..+..+++|+.|+|.+|.++
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 77777776311 124556666777777766654
No 464
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.73 E-value=1.6e-08 Score=114.43 Aligned_cols=99 Identities=28% Similarity=0.484 Sum_probs=73.9
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|++|+++ .+|..+. ++|+.|+|++|+|+ .||..+.. .|+.|+|++|+++ .||..+. ++|+.|+
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~~---~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLPD---TIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhhc---cccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 35788999999988 5676654 58888888888888 67876543 4788888888887 6777654 4678888
Q ss_pred ccCCcCCCCCCccccccccccccccccccccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g 191 (623)
|++|+|+ .+|..+. ++|+.|+|++|+|++
T Consensus 269 Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 269 LFHNKIS-CLPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred CcCCccC-ccccccC--CCCcEEECCCCcccc
Confidence 8888887 5776654 467777788777774
No 465
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.72 E-value=1.1e-07 Score=98.95 Aligned_cols=169 Identities=22% Similarity=0.309 Sum_probs=127.1
Q ss_pred ccEEEEEEe-CCCcEEEEEEeccccc-cHHHHHHHHHHhCCCCCCCCcceeEEEEe----CCeeeEEEecCCC-CCHhhh
Q 006982 318 TGTMYKALL-EDGTSLMVKRLQDSQR-SEKEFVAEMATLGSVKNRNLVPLLGFCMA----KKERLLVYKHMPN-GSLYDL 390 (623)
Q Consensus 318 ~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~~~-gsL~~~ 390 (623)
..+.||+.. .||..|++|+++..+. .......-+++.+++.|+|+|++..++.. +...++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357899984 4899999999954331 12233456788899999999999998863 4467899999986 577776
Q ss_pred ccCCC-----------CCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 391 LHPAD-----------DTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 391 l~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
-.... ..+...++...|.++.|+..||.++|+. |++-+-|.+++|+++.+..++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 43221 1234567889999999999999999999 999999999999999999999988887766543
Q ss_pred CCCcccccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 006982 460 IDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510 (623)
Q Consensus 460 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P 510 (623)
... |.+.. -.+-|.=.||.+++.+.||..-
T Consensus 446 d~~------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 220 11111 2467888999999999999654
No 466
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.66 E-value=2.3e-09 Score=111.89 Aligned_cols=111 Identities=32% Similarity=0.462 Sum_probs=96.7
Q ss_pred eCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCcccc
Q 006982 95 QFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLG 174 (623)
Q Consensus 95 ~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~ 174 (623)
.||..+++|..|++|||+.|+++ .+|..+..| + |+.|-+++|+++ .+|.+++.+..|..||.+.|++. ++|++++
T Consensus 112 ~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-p-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~ 186 (722)
T KOG0532|consen 112 TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-P-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLG 186 (722)
T ss_pred ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-c-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhh
Confidence 68899999999999999999999 899999985 6 999999999999 89999999999999999999999 8999999
Q ss_pred ccccccccccccccccccCCccccccccccccCCCC
Q 006982 175 QLGRLKSFSVANNLLSGSIPTFVNLTLSADSVTNNQ 210 (623)
Q Consensus 175 ~l~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 210 (623)
.+.+|+.|++..|++.--.+....+.+..+.|+.|.
T Consensus 187 ~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNk 222 (722)
T KOG0532|consen 187 YLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNK 222 (722)
T ss_pred hHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCc
Confidence 999999999999998866665555555555665554
No 467
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.66 E-value=7.2e-09 Score=115.59 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=135.8
Q ss_pred HhccCcccceeeccCccEEEEEEeC-CCcEEEEEEecccc----ccHHHHHHHHHHhCCCCCCCCcceeEEEEeCCeeeE
Q 006982 303 ATNSFSKNNIIGSGRTGTMYKALLE-DGTSLMVKRLQDSQ----RSEKEFVAEMATLGSVKNRNLVPLLGFCMAKKERLL 377 (623)
Q Consensus 303 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 377 (623)
..+.|.+.+-+-+|.++.+..+.-. .|...+.|...... ...+....+-.++-..+||-++....-+.-....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3455666667778889988877632 22112222221110 111122222223333344555544333334566789
Q ss_pred EEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 378 VYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 378 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
|++|..+++|...|+... ..+..-.......+..+.+|||.. .+.|+|++|.|++...++..+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 999999999999998543 233323334455677899999998 7999999999999999999999999844321
Q ss_pred CCC---CCc---------------------c---cccccCCCCcccccCcccccCCCCCcchhHHHHHHHHHHHHhCCCC
Q 006982 458 NPI---DTH---------------------L---STFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERP 510 (623)
Q Consensus 458 ~~~---~~~---------------------~---~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV~sfGvil~elltg~~P 510 (623)
.-. ... . ...-....+|+.|.+||...+......+|.|++|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 100 000 0 0001123589999999999999989999999999999999999999
Q ss_pred CCCCCCc
Q 006982 511 TNVAKAP 517 (623)
Q Consensus 511 ~~~~~~~ 517 (623)
|......
T Consensus 1035 ~na~tpq 1041 (1205)
T KOG0606|consen 1035 FNAETPQ 1041 (1205)
T ss_pred CCCcchh
Confidence 9875543
No 468
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=98.65 E-value=8.9e-09 Score=107.76 Aligned_cols=110 Identities=21% Similarity=0.298 Sum_probs=84.0
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.|+++.|+|.+|-++..-..++..++.|++||||.|.++ .||..-+.-..++++|+|++|+++-.--..|.++.+|..|
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tl 202 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTL 202 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheee
Confidence 467888888888877777777888888888888888888 6765433323458888888888885445668888888888
Q ss_pred eccCCcCCCCCCc-ccccccccccccccccccc
Q 006982 159 KLDHNRFSGQIPP-QLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 159 ~l~~N~~~g~iP~-~l~~l~~L~~l~l~~N~l~ 190 (623)
.|+.|+++ ++|. .|.+|++|+.|+|..|++.
T Consensus 203 kLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~ir 234 (873)
T KOG4194|consen 203 KLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIR 234 (873)
T ss_pred ecccCccc-ccCHHHhhhcchhhhhhcccccee
Confidence 88888888 5665 4555888888888888774
No 469
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.63 E-value=8e-08 Score=108.37 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=26.1
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCCh
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPD 122 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~ 122 (623)
.++.|+|.+|+|+. +|. .+++|++|+|++|+|+ .+|.
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~ 259 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV 259 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC
Confidence 46777777777774 554 2567888888888887 5664
No 470
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.63 E-value=1.6e-08 Score=76.98 Aligned_cols=57 Identities=33% Similarity=0.554 Sum_probs=29.3
Q ss_pred CCEEEccCccCCCCCC-CCCCCCCCCceeeccCCcCCCCCCcccccccccccccccccc
Q 006982 131 LTSLDLSSNNFSGSIP-SNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNL 188 (623)
Q Consensus 131 L~~L~L~~N~l~g~ip-~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~ 188 (623)
|+.|+|++|+++ .|| ..|.++++|++|++++|+++..-|..+..+++|++|++++|+
T Consensus 3 L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 455555555555 233 344555555555555555554334445555555555555554
No 471
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.61 E-value=1.7e-08 Score=76.83 Aligned_cols=61 Identities=36% Similarity=0.502 Sum_probs=52.0
Q ss_pred CCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcC
Q 006982 104 SSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRF 165 (623)
Q Consensus 104 ~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~ 165 (623)
++|+.|+|++|+++ .||++...-.++|++|++++|+++..-|..|.++++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 57999999999999 67765443345699999999999966667899999999999999986
No 472
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.57 E-value=1.4e-08 Score=101.72 Aligned_cols=144 Identities=21% Similarity=0.312 Sum_probs=113.0
Q ss_pred eeecCCC--------CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCC
Q 006982 72 VECWHPD--------ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSG 143 (623)
Q Consensus 72 v~c~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g 143 (623)
|.|+..+ +...+.|+|..|+++-..|..|+.+.+|+.||||+|+++-.=|+.+..+.+-++-+++++|+++
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~- 129 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT- 129 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-
Confidence 8886643 2356899999999998777889999999999999999997668888887664555566679999
Q ss_pred CCCC-CCCCCCCCceeeccCCcCCCCCCccccccccccccccccccccccCCc-ccc-c-cccccccCCCCCCCCCCC
Q 006982 144 SIPS-NLANCTYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT-FVN-L-TLSADSVTNNQGLCGEPL 217 (623)
Q Consensus 144 ~ip~-~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~-~~~-~-~~~~~~~~~n~~l~~~~~ 217 (623)
.+|. .|++|.+|+.|.+.-|++.-.....+..|++|..|.+-+|.+.- |+. .+. + .....-+.-|+..|...+
T Consensus 130 ~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~-i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 130 DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQS-ICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhh-hccccccchhccchHhhhcCcccccccc
Confidence 7776 58999999999999999998888889999999999999999863 332 222 1 223344556777775544
No 473
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.49 E-value=1.8e-08 Score=110.87 Aligned_cols=104 Identities=31% Similarity=0.406 Sum_probs=90.5
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.++..|+|++|.|.-.-...+.+|..|+.|+||+|.|+ .||..+.++.. |++|...+|++. .+| ++.+++.|+.+|
T Consensus 383 ~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~-L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGR-LHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred cceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhh-hHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 46889999999997544456899999999999999999 99999999755 999999999999 889 999999999999
Q ss_pred ccCCcCCC-CCCcccccccccccccccccc
Q 006982 160 LDHNRFSG-QIPPQLGQLGRLKSFSVANNL 188 (623)
Q Consensus 160 l~~N~~~g-~iP~~l~~l~~L~~l~l~~N~ 188 (623)
||.|+|+- .+|..+-. ++|++|||++|.
T Consensus 459 lS~N~L~~~~l~~~~p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPEALPS-PNLKYLDLSGNT 487 (1081)
T ss_pred cccchhhhhhhhhhCCC-cccceeeccCCc
Confidence 99999983 44544322 799999999996
No 474
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.48 E-value=1.2e-06 Score=84.96 Aligned_cols=134 Identities=19% Similarity=0.170 Sum_probs=95.5
Q ss_pred CcccceeeccCccEEEEEEeCCCcEEEEEEecccc-----------------------ccHHHHHHHHHHhCCCCCC--C
Q 006982 307 FSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQ-----------------------RSEKEFVAEMATLGSVKNR--N 361 (623)
Q Consensus 307 f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------------~~~~~~~~e~~~l~~l~h~--n 361 (623)
....+.||-|.-+.||.|..++|.++++|.=+... .+....++|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45568899999999999999999999999432110 1123457899999988654 5
Q ss_pred CcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeC
Q 006982 362 LVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 441 (623)
Q Consensus 362 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~ 441 (623)
+.+.+++ +.-.+||||++|-.|...-- +....-.++..|.+-+.-+-.. ||+|+|+.+-||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~---------~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL---------DVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC---------cccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence 6666553 45679999999866554321 1122233445555555544466 999999999999999
Q ss_pred CCCCeEEeecccccc
Q 006982 442 DDFEPKISDFGLARL 456 (623)
Q Consensus 442 ~~~~~kl~Dfgla~~ 456 (623)
++|.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999965543
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.47 E-value=7.1e-08 Score=89.41 Aligned_cols=88 Identities=27% Similarity=0.412 Sum_probs=29.6
Q ss_pred cccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccc-cccc
Q 006982 99 GIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQL-GQLG 177 (623)
Q Consensus 99 ~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l-~~l~ 177 (623)
.+.+..+++.|+|++|.++ .|. .++....+|+.||||+|.++ .++ .+..+++|+.|+|++|+++ .+++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-T
T ss_pred ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 3567778999999999999 564 46532345999999999999 665 5888999999999999999 576655 4699
Q ss_pred cccccccccccccc
Q 006982 178 RLKSFSVANNLLSG 191 (623)
Q Consensus 178 ~L~~l~l~~N~l~g 191 (623)
+|+.|+|++|++..
T Consensus 89 ~L~~L~L~~N~I~~ 102 (175)
T PF14580_consen 89 NLQELYLSNNKISD 102 (175)
T ss_dssp T--EEE-TTS---S
T ss_pred cCCEEECcCCcCCC
Confidence 99999999999964
No 476
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=7.6e-08 Score=103.71 Aligned_cols=98 Identities=24% Similarity=0.420 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCCCCCcccccccC-----CCCcccccCcccccC
Q 006982 411 IGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNPIDTHLSTFVNG-----EFGDLGYVAPEYART 485 (623)
Q Consensus 411 ~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~-----~~gt~~y~aPE~~~~ 485 (623)
.+++.|+.|+|... +++|++|.|++|.+++.+..||+.|+++..........-...+. ......|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 44558999999874 89999999999999999999999999987654421111111111 124568999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHhCCCC
Q 006982 486 LVATPKGDVYSFGTVLLELVTGERP 510 (623)
Q Consensus 486 ~~~s~k~DV~sfGvil~elltg~~P 510 (623)
...+.++|+||+||++|-+..|..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~ 208 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKS 208 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcc
Confidence 8889999999999999999955544
No 477
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.40 E-value=4.8e-08 Score=102.29 Aligned_cols=103 Identities=24% Similarity=0.435 Sum_probs=65.9
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeecc
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLD 161 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~ 161 (623)
+..|-+++|+++ .+|++|+.+..|..||.+.|.+. ++|+.++.+.+ |+.|.+..|++. .+|.+++.| .|..||+|
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~s-lr~l~vrRn~l~-~lp~El~~L-pLi~lDfS 219 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTS-LRDLNVRRNHLE-DLPEELCSL-PLIRLDFS 219 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHH-HHHHHHhhhhhh-hCCHHHhCC-ceeeeecc
Confidence 334455555554 56666666666666666666666 66666666554 666666666666 566666633 46667777
Q ss_pred CCcCCCCCCcccccccccccccccccccc
Q 006982 162 HNRFSGQIPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 162 ~N~~~g~iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
.|+++ .||..|.+|+.|++|.|.+|-|.
T Consensus 220 cNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 220 CNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 77766 66777777777777777777665
No 478
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.39 E-value=8.8e-07 Score=106.89 Aligned_cols=111 Identities=23% Similarity=0.305 Sum_probs=65.8
Q ss_pred EEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeecc
Q 006982 82 VLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLD 161 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~ 161 (623)
+..|++.++.+ ..+|..+ .+.+|+.|+|++|++. .+|..+..+. +|+.|+|++|+..+.+| .++.+++|+.|+|+
T Consensus 591 Lr~L~~~~~~l-~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~-~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~ 665 (1153)
T PLN03210 591 LRLLRWDKYPL-RCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLT-GLRNIDLRGSKNLKEIP-DLSMATNLETLKLS 665 (1153)
T ss_pred cEEEEecCCCC-CCCCCcC-CccCCcEEECcCcccc-ccccccccCC-CCCEEECCCCCCcCcCC-ccccCCcccEEEec
Confidence 34444444433 2444444 3556666666666666 5666665543 36667776655444665 36666667777776
Q ss_pred CCcCCCCCCccccccccccccccccccccccCCccc
Q 006982 162 HNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTFV 197 (623)
Q Consensus 162 ~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~~ 197 (623)
+|.....+|.+++++++|+.|++++|..-+.+|...
T Consensus 666 ~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i 701 (1153)
T PLN03210 666 DCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI 701 (1153)
T ss_pred CCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC
Confidence 666555666666666777777776665555666543
No 479
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.38 E-value=7.3e-07 Score=107.60 Aligned_cols=113 Identities=19% Similarity=0.308 Sum_probs=93.8
Q ss_pred CcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 80 NRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
..++.|+|.++.+. .+|..+..+++|+.|+|++|..-+.+|. ++.+ ++|+.|+|++|.....+|..++++++|+.|+
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l-~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMA-TNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccC-CcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 46888999999876 5788888999999999998776668884 6665 4599999999877778999999999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccccccCCcc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPTF 196 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~~ 196 (623)
|++|..-+.+|..+ ++++|+.|++++|...+.+|..
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~ 723 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI 723 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc
Confidence 99977666888876 7889999999998777777754
No 480
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.37 E-value=2.1e-06 Score=82.82 Aligned_cols=107 Identities=22% Similarity=0.275 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhCCCCC--CCCcceeEEEEeCC----eeeEEEecCCCC-CHhhhccCCCCCCCccChHHHHHHHHHHHHH
Q 006982 344 EKEFVAEMATLGSVKN--RNLVPLLGFCMAKK----ERLLVYKHMPNG-SLYDLLHPADDTGKSVDWPRRLKIAIGAARG 416 (623)
Q Consensus 344 ~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~ 416 (623)
.....+|.+.+.+++. -...+.+++.+... ..++|+|++++. +|.+++.... ..+...+..++.+++..
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHH
Confidence 3456778887777743 34566777766532 347999999984 7999985321 25556678899999999
Q ss_pred HHHHHhcCCCCcEecCCCCCceeeCCCC---CeEEeeccccccc
Q 006982 417 FAWLHHNCNPRIIHRNISSKCILLDDDF---EPKISDFGLARLM 457 (623)
Q Consensus 417 l~yLH~~~~~~i~H~dlk~~NILl~~~~---~~kl~Dfgla~~~ 457 (623)
++-||.. +|+|+|++++|||++.+. .+.++||+-++..
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999 999999999999999887 8999999988753
No 481
>PRK09902 hypothetical protein; Provisional
Probab=98.34 E-value=9.3e-06 Score=77.08 Aligned_cols=138 Identities=17% Similarity=0.102 Sum_probs=101.7
Q ss_pred eeccCccEEEEEEeCCCcEEEEEEecc----c---cccHHHHHHHHHHhCCCCCC--CCcceeEEEEeC----CeeeEEE
Q 006982 313 IGSGRTGTMYKALLEDGTSLMVKRLQD----S---QRSEKEFVAEMATLGSVKNR--NLVPLLGFCMAK----KERLLVY 379 (623)
Q Consensus 313 lG~G~~g~Vy~~~~~~~~~vavK~~~~----~---~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~----~~~~lV~ 379 (623)
-|+||-+.|++-.+. |..+.+|+-.. + ......|.+|+..+.++..- .+.++..+.... ...+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 467889999998775 44688887642 1 23567899999999888543 344444222221 2357999
Q ss_pred ecCCC-CCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC--eEEeecccccc
Q 006982 380 KHMPN-GSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE--PKISDFGLARL 456 (623)
Q Consensus 380 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~--~kl~Dfgla~~ 456 (623)
|-+++ -+|.+++..... .+.+...+..+..+++..++-||.. ++.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97753 589988853321 3456777889999999999999999 9999999999999986666 99999977764
No 482
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.28 E-value=9e-08 Score=99.00 Aligned_cols=114 Identities=22% Similarity=0.220 Sum_probs=80.0
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCC---CCEEEcCCCCCCC----CCChhHhhhcCCCCEEEccCccCCCCC----CC
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSS---MTGLDLSSNKLYG----PLPDDISKLVGFLTSLDLSSNNFSGSI----PS 147 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~---L~~L~L~~N~l~g----~ip~~~~~l~~~L~~L~L~~N~l~g~i----p~ 147 (623)
..+++.|+|+++.+.+..+..+..+.+ |+.|+|++|.+++ .+...+..+.++|+.|+|++|.+++.. +.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 357888888888887766666666655 8888888888874 233344443245888888888888532 33
Q ss_pred CCCCCCCCceeeccCCcCCCC----CCcccccccccccccccccccccc
Q 006982 148 NLANCTYLNSLKLDHNRFSGQ----IPPQLGQLGRLKSFSVANNLLSGS 192 (623)
Q Consensus 148 ~~~~l~~L~~l~l~~N~~~g~----iP~~l~~l~~L~~l~l~~N~l~g~ 192 (623)
.+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++.
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 208 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDE 208 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChH
Confidence 456677888888888888853 344455566888888888887643
No 483
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.26 E-value=1.6e-07 Score=97.12 Aligned_cols=111 Identities=22% Similarity=0.396 Sum_probs=85.9
Q ss_pred CcEEEEEecCCCcee----eCCccccCC-CCCCEEEcCCCCCCCCCChh----HhhhcCCCCEEEccCccCCCC----CC
Q 006982 80 NRVLNLRLTDMGLKG----QFPRGIRNC-SSMTGLDLSSNKLYGPLPDD----ISKLVGFLTSLDLSSNNFSGS----IP 146 (623)
Q Consensus 80 ~~v~~l~l~~~~l~g----~~p~~l~~l-~~L~~L~L~~N~l~g~ip~~----~~~l~~~L~~L~L~~N~l~g~----ip 146 (623)
.++..|++++|.+++ .+...+..+ ++|+.|+|++|.+++..+.. +..+ ..|+.|+|++|.+++. ++
T Consensus 108 ~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~l~ 186 (319)
T cd00116 108 SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRAN-RDLKELNLANNGIGDAGIRALA 186 (319)
T ss_pred CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhC-CCcCEEECcCCCCchHHHHHHH
Confidence 349999999999883 444566777 89999999999999654333 3333 3499999999999953 34
Q ss_pred CCCCCCCCCceeeccCCcCCCC----CCccccccccccccccccccccc
Q 006982 147 SNLANCTYLNSLKLDHNRFSGQ----IPPQLGQLGRLKSFSVANNLLSG 191 (623)
Q Consensus 147 ~~~~~l~~L~~l~l~~N~~~g~----iP~~l~~l~~L~~l~l~~N~l~g 191 (623)
..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 187 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 187 EGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 4556678999999999999854 34456678889999999999886
No 484
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.23 E-value=3.4e-07 Score=88.79 Aligned_cols=106 Identities=25% Similarity=0.370 Sum_probs=63.7
Q ss_pred cEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeec
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKL 160 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l 160 (623)
.|..|+|+.|++.-. .++..|++|+.||||+|.|+ .+-..-.++ .+.+.|.|+.|.+. .+ +.++.+-+|..||+
T Consensus 308 kir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KL-GNIKtL~La~N~iE-~L-SGL~KLYSLvnLDl 381 (490)
T KOG1259|consen 308 KLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKL-GNIKTLKLAQNKIE-TL-SGLRKLYSLVNLDL 381 (490)
T ss_pred ceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhh-cCEeeeehhhhhHh-hh-hhhHhhhhheeccc
Confidence 455666666665421 22556666666666666666 444333343 33666666666665 22 34666677777777
Q ss_pred cCCcCCCCCC--ccccccccccccccccccccccC
Q 006982 161 DHNRFSGQIP--PQLGQLGRLKSFSVANNLLSGSI 193 (623)
Q Consensus 161 ~~N~~~g~iP--~~l~~l~~L~~l~l~~N~l~g~i 193 (623)
++|++. .+- ..+|+|+.|+.+.|.+|.+++.+
T Consensus 382 ~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 382 SSNQIE-ELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred cccchh-hHHHhcccccccHHHHHhhcCCCccccc
Confidence 777765 222 35677777777777777776553
No 485
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.22 E-value=4.9e-06 Score=90.16 Aligned_cols=145 Identities=20% Similarity=0.280 Sum_probs=94.7
Q ss_pred ccCcccceeeccCccEEEEEEeCCCcEEEEEEecccccc-------------------------------HHH-------
Q 006982 305 NSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRS-------------------------------EKE------- 346 (623)
Q Consensus 305 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------------------------~~~------- 346 (623)
.+|+ .+-|+.++-|+||+|++++|+.||||+....-.. .++
T Consensus 126 ~eF~-~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFE-PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcC-CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 3454 3679999999999999999999999987532100 011
Q ss_pred ---HHHHHHHhCCCC-----CCCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHH-
Q 006982 347 ---FVAEMATLGSVK-----NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGF- 417 (623)
Q Consensus 347 ---~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l- 417 (623)
+..|..-+.+++ .+++.-..=|.+-.....++|||++|-.+.+...... ..++ +..++..++++.
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGID---RKELAELLVRAFL 278 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCC---HHHHHHHHHHHHH
Confidence 223444443332 2333222223334567899999999998888843221 2233 334444444432
Q ss_pred HHHHhcCCCCcEecCCCCCceeeCCCCCeEEeecccccccCC
Q 006982 418 AWLHHNCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMNP 459 (623)
Q Consensus 418 ~yLH~~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~~ 459 (623)
..+-.. +++|.|.+|.||+++.++...+.|||+...+.+
T Consensus 279 ~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 222233 899999999999999999999999999987654
No 486
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.21 E-value=1.7e-07 Score=80.78 Aligned_cols=109 Identities=24% Similarity=0.318 Sum_probs=84.4
Q ss_pred EEEEEecCCCceeeCCcc---ccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 82 VLNLRLTDMGLKGQFPRG---IRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 82 v~~l~l~~~~l~g~~p~~---l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
...++|++..| +.|+.. +.....|+..+|++|.|. .+|+.+....+.++.|+|++|.++ .+|.+++.++.|+.|
T Consensus 29 ~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 34456666554 234443 445566777799999998 788888776656899999999999 789999999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+++.|.|+ ..|.-+..|.+|.+|+..+|... +||.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 99999998 67888888889999998888765 4553
No 487
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.20 E-value=1.8e-07 Score=80.57 Aligned_cols=113 Identities=20% Similarity=0.240 Sum_probs=92.5
Q ss_pred CCcEEEEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 79 ENRVLNLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 79 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
..+++.++|++|+|...-+..-...+.++.|+|++|.++ .+|.++..+.. |+.|++++|.|. ..|.-+..|.+|..|
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~a-Lr~lNl~~N~l~-~~p~vi~~L~~l~~L 128 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPA-LRSLNLRFNPLN-AEPRVIAPLIKLDML 128 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHH-hhhcccccCccc-cchHHHHHHHhHHHh
Confidence 357889999999998654444456679999999999999 89999999765 999999999999 789999999999999
Q ss_pred eccCCcCCCCCCccccccccccccccccccccccCCc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+..+|..- +||-.+..-+..-..++.+|.+.+.-|.
T Consensus 129 ds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 129 DSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred cCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 99999988 7887754444444556677777776664
No 488
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.18 E-value=2e-05 Score=77.10 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=85.2
Q ss_pred ceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCCC--CcceeEEEEeCCeeeEEEecCCCCC-H
Q 006982 311 NIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNRN--LVPLLGFCMAKKERLLVYKHMPNGS-L 387 (623)
Q Consensus 311 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gs-L 387 (623)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-. +.+.+++....+...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 56899999999984 24567788776533 3445688999988886433 4667777777777789999999863 2
Q ss_pred hhh---------------------ccCCCCCCCccChHHHHH-HHH----------HHH-HHHHHHHhc-CCCCcEecCC
Q 006982 388 YDL---------------------LHPADDTGKSVDWPRRLK-IAI----------GAA-RGFAWLHHN-CNPRIIHRNI 433 (623)
Q Consensus 388 ~~~---------------------l~~~~~~~~~l~~~~~~~-i~~----------~ia-~~l~yLH~~-~~~~i~H~dl 433 (623)
... +|........+ ..+.. +.. .+. ....+|... ..+.++|+|+
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l--~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTF--QSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcH--HHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 111 12211111111 11000 000 000 112222211 1235789999
Q ss_pred CCCceeeCCCCCeEEeecccccc
Q 006982 434 SSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 434 k~~NILl~~~~~~kl~Dfgla~~ 456 (623)
.|.||++++++ +.|+||+.+..
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcCc
Confidence 99999999988 99999988763
No 489
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.15 E-value=3.9e-07 Score=88.34 Aligned_cols=90 Identities=28% Similarity=0.329 Sum_probs=44.0
Q ss_pred eeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccc
Q 006982 94 GQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQL 173 (623)
Q Consensus 94 g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l 173 (623)
|..-.++.....|+.||||+|.++ .|-.+.. +.+.++.|+||+|.+. .+- .+..+++|+.||||+|.++ .+-..-
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvK-L~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh 348 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVK-LAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWH 348 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhh-hccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhH
Confidence 333334444455566666666655 4444432 2344666666666655 332 2555566666666666555 232222
Q ss_pred ccccccccccccccc
Q 006982 174 GQLGRLKSFSVANNL 188 (623)
Q Consensus 174 ~~l~~L~~l~l~~N~ 188 (623)
..|.+++.|.|+.|.
T Consensus 349 ~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 349 LKLGNIKTLKLAQNK 363 (490)
T ss_pred hhhcCEeeeehhhhh
Confidence 333344444444443
No 490
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.10 E-value=1.4e-06 Score=93.12 Aligned_cols=107 Identities=32% Similarity=0.496 Sum_probs=70.2
Q ss_pred EEEecCCCceeeCCccccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCC
Q 006982 84 NLRLTDMGLKGQFPRGIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHN 163 (623)
Q Consensus 84 ~l~l~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N 163 (623)
.+++.++.+...+. .+..++.++.|++.+|.++ .||+..+.+.++|+.|++++|++. .+|..++++++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCch-hhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 35566655533322 3445567777777777777 677666653213777777777777 66666777777777777777
Q ss_pred cCCCCCCccccccccccccccccccccccCCc
Q 006982 164 RFSGQIPPQLGQLGRLKSFSVANNLLSGSIPT 195 (623)
Q Consensus 164 ~~~g~iP~~l~~l~~L~~l~l~~N~l~g~ip~ 195 (623)
+++ .+|...+.+++|+.|++++|+++ .+|.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~ 203 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPP 203 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCch
Confidence 777 66766667777777777777776 3443
No 491
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.04 E-value=2.1e-06 Score=60.09 Aligned_cols=35 Identities=40% Similarity=0.650 Sum_probs=21.5
Q ss_pred CCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCC
Q 006982 131 LTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFS 166 (623)
Q Consensus 131 L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~ 166 (623)
|++|+|++|+|+ .||+.+++|++|+.|+|++|+++
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 666666666666 56655666666666666666666
No 492
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.02 E-value=6.9e-05 Score=72.28 Aligned_cols=153 Identities=19% Similarity=0.197 Sum_probs=99.8
Q ss_pred ccCHHHHHHHhccCcccce---eeccCccEEEEEEeCCCcEEEEEEeccccccH--------------------H-----
Q 006982 294 KMRLSDLMKATNSFSKNNI---IGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE--------------------K----- 345 (623)
Q Consensus 294 ~~~~~~l~~~~~~f~~~~~---lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~----- 345 (623)
..++..+....+...+... |.+|.-..||+|...++..+|+|+++...... +
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 3445555555555555554 45677779999998889999999986432110 1
Q ss_pred HHHHHHHHhCCCC--CCCCcceeEEEEeCCeeeEEEecCCCC-CHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHh
Q 006982 346 EFVAEMATLGSVK--NRNLVPLLGFCMAKKERLLVYKHMPNG-SLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHH 422 (623)
Q Consensus 346 ~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~ 422 (623)
-..+|+.-|.++. +-.+.+.+++. ...|||||+... .-.-.|.. ..+.......+..++.+.+.-|-.
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-----v~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-----VPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc-----CCcCchhHHHHHHHHHHHHHHHHH
Confidence 1235666666663 33444444442 346999999653 11112211 122222456677788888888877
Q ss_pred cCCCCcEecCCCCCceeeCCCCCeEEeecccccccC
Q 006982 423 NCNPRIIHRNISSKCILLDDDFEPKISDFGLARLMN 458 (623)
Q Consensus 423 ~~~~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~~ 458 (623)
.+ +++|+||..=|||+. ++.+.|+|||-+....
T Consensus 185 ~a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 185 EA--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred hc--CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 43 999999999999999 8899999999887654
No 493
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.00 E-value=4.7e-05 Score=75.58 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=84.2
Q ss_pred eeccCc-cEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCC-CCCCcceeEEEEeCCeeeEEEecCCCCCHhhh
Q 006982 313 IGSGRT-GTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVK-NRNLVPLLGFCMAKKERLLVYKHMPNGSLYDL 390 (623)
Q Consensus 313 lG~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 390 (623)
|-.|.. ..||+.... +..+++|+..... .....+|++++..+. +--+.+++++....+..++|||+++|.++...
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 444555 789999865 4678888875543 334667888877773 33455667777666667899999999877643
Q ss_pred c-------------------cCCCCCCCccC--hHHHHHHHH--------------------HHHHHHHHHHhc----CC
Q 006982 391 L-------------------HPADDTGKSVD--WPRRLKIAI--------------------GAARGFAWLHHN----CN 425 (623)
Q Consensus 391 l-------------------~~~~~~~~~l~--~~~~~~i~~--------------------~ia~~l~yLH~~----~~ 425 (623)
. |........+. +..++.... .+......|-.. ..
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 2 22111111111 001110000 011111222111 23
Q ss_pred CCcEecCCCCCceeeCCCCCeEEeecccccc
Q 006982 426 PRIIHRNISSKCILLDDDFEPKISDFGLARL 456 (623)
Q Consensus 426 ~~i~H~dlk~~NILl~~~~~~kl~Dfgla~~ 456 (623)
+.++|+|+.|.||+++++....|+||+.+..
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 4689999999999999988889999987753
No 494
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.00 E-value=7.3e-05 Score=71.35 Aligned_cols=136 Identities=14% Similarity=0.197 Sum_probs=88.3
Q ss_pred hccCcccceeeccCccEEEEEEeCCCcEEEEEEeccccccH-H---------HHHHHHHHhCCCCCC---CCcceeEEEE
Q 006982 304 TNSFSKNNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSE-K---------EFVAEMATLGSVKNR---NLVPLLGFCM 370 (623)
Q Consensus 304 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~---------~~~~e~~~l~~l~h~---niv~l~~~~~ 370 (623)
.++|...+++-......|.+-.. +|..+++|......... + ...+++..+.+++.. ..+.++.+..
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 45677777777777677766666 47888899876532211 1 123344444444322 2223222222
Q ss_pred e-----CCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCceeeCCCCC
Q 006982 371 A-----KKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDDDFE 445 (623)
Q Consensus 371 ~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~~i~H~dlk~~NILl~~~~~ 445 (623)
. ....++++||++|..|.+... ++. .++..+..++.-||.. |+.|+|+.|.|+++++++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~- 172 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG- 172 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-
Confidence 2 234568999999988876642 221 2456677889999999 999999999999999665
Q ss_pred eEEeecccccc
Q 006982 446 PKISDFGLARL 456 (623)
Q Consensus 446 ~kl~Dfgla~~ 456 (623)
+++.||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999987654
No 495
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=97.99 E-value=2.6e-06 Score=91.10 Aligned_cols=104 Identities=34% Similarity=0.550 Sum_probs=92.4
Q ss_pred cEEEEEecCCCceeeCCccccCCC-CCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceee
Q 006982 81 RVLNLRLTDMGLKGQFPRGIRNCS-SMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLK 159 (623)
Q Consensus 81 ~v~~l~l~~~~l~g~~p~~l~~l~-~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~ 159 (623)
.+..|++.+|+++ .||+.++.+. +|+.|++++|.+. .+|..+..+.. |+.|++++|+++ .+|...+.+++|+.|+
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~-L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPN-LKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhcccc-ccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 5888999999987 6787888885 9999999999999 88888888654 999999999999 8898888999999999
Q ss_pred ccCCcCCCCCCccccccccccccccccccc
Q 006982 160 LDHNRFSGQIPPQLGQLGRLKSFSVANNLL 189 (623)
Q Consensus 160 l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l 189 (623)
+++|+++ .+|..++.+..|+.|.+++|..
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~ 221 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSI 221 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcc
Confidence 9999999 8999887788899999999963
No 496
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=97.98 E-value=1.4e-06 Score=87.65 Aligned_cols=89 Identities=19% Similarity=0.225 Sum_probs=52.8
Q ss_pred ccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCceeeccCCcCCCCCCccccccccc
Q 006982 100 IRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSLKLDHNRFSGQIPPQLGQLGRL 179 (623)
Q Consensus 100 l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l~l~~N~~~g~iP~~l~~l~~L 179 (623)
|..|++|+.|+|++|++++.-+..+..+.. ++.|+|..|++.-.--..|.++..|++|+|++|+++-.-|.+|..+.+|
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~-l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l 348 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAE-LQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSL 348 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhh-hhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccccee
Confidence 556666666666666666555555555433 6666666666652222345556666666666666665556666666666
Q ss_pred cccccccccc
Q 006982 180 KSFSVANNLL 189 (623)
Q Consensus 180 ~~l~l~~N~l 189 (623)
..|+|-.|.|
T Consensus 349 ~~l~l~~Np~ 358 (498)
T KOG4237|consen 349 STLNLLSNPF 358 (498)
T ss_pred eeeehccCcc
Confidence 6666655544
No 497
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=97.97 E-value=3.3e-06 Score=97.49 Aligned_cols=105 Identities=30% Similarity=0.322 Sum_probs=73.2
Q ss_pred cEEEEEecCCCc-eeeCCc-cccCCCCCCEEEcCCCCCCCCCChhHhhhcCCCCEEEccCccCCCCCCCCCCCCCCCcee
Q 006982 81 RVLNLRLTDMGL-KGQFPR-GIRNCSSMTGLDLSSNKLYGPLPDDISKLVGFLTSLDLSSNNFSGSIPSNLANCTYLNSL 158 (623)
Q Consensus 81 ~v~~l~l~~~~l-~g~~p~-~l~~l~~L~~L~L~~N~l~g~ip~~~~~l~~~L~~L~L~~N~l~g~ip~~~~~l~~L~~l 158 (623)
.+++|-+.+|.. -..++. .|..++.|+.|||++|.=-+.+|.+|+.+.+ |++|+|+...++ .+|..+++|..|.+|
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~-LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH-LRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh-hhcccccCCCcc-ccchHHHHHHhhhee
Confidence 466666766652 223333 3666777888888877666677877777765 788888877777 777777777788888
Q ss_pred eccCCcCCCCCCccccccccccccccccc
Q 006982 159 KLDHNRFSGQIPPQLGQLGRLKSFSVANN 187 (623)
Q Consensus 159 ~l~~N~~~g~iP~~l~~l~~L~~l~l~~N 187 (623)
++..+.....+|..+..|++|++|.+..-
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccccccccccccchhhhcccccEEEeecc
Confidence 87777766566666666777777776443
No 498
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.92 E-value=3.9e-05 Score=72.55 Aligned_cols=105 Identities=24% Similarity=0.248 Sum_probs=81.9
Q ss_pred HHHHHHhCCCCC-CCCcceeEEEEeCCeeeEEEecCCCCCHhhhccCCCCCCCccChHHHHHHHHHHHHHHHHHHhcCCC
Q 006982 348 VAEMATLGSVKN-RNLVPLLGFCMAKKERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNP 426 (623)
Q Consensus 348 ~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~yLH~~~~~ 426 (623)
..|.-++..+++ +++.+++|+|- .++|.||.+.+++...-.. -..-..-+|..|.+||.++.+.+.++++....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~-l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRP-LSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccc-cccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 357777888866 69999999994 4689999998766532100 00112468999999999999999999986544
Q ss_pred CcEecCCCCCceeeCCCCCeEEeeccccccc
Q 006982 427 RIIHRNISSKCILLDDDFEPKISDFGLARLM 457 (623)
Q Consensus 427 ~i~H~dlk~~NILl~~~~~~kl~Dfgla~~~ 457 (623)
.+.-.|++++|+-+++++.+|++|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6888999999999999999999999777543
No 499
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.91 E-value=7.3e-05 Score=73.24 Aligned_cols=145 Identities=19% Similarity=0.168 Sum_probs=84.6
Q ss_pred cceeeccCccEEEEEEeCCCcEEEEEEeccccccHHHHHHHHHHhCCCCCC--CCcceeEEEEeC---CeeeEEEecCCC
Q 006982 310 NNIIGSGRTGTMYKALLEDGTSLMVKRLQDSQRSEKEFVAEMATLGSVKNR--NLVPLLGFCMAK---KERLLVYKHMPN 384 (623)
Q Consensus 310 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~---~~~~lV~e~~~~ 384 (623)
.+.++.|..+.||+....+ ..+++|..... .....+..|..++..+... .+.+++.+.... ...+++++++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 3578999999999999887 58899987655 4456677888887777433 345666654333 346899999999
Q ss_pred CCHhh----------------h---ccCCCCCCCccChHH---------HHHH------------HHHHHH-HHHHHHhc
Q 006982 385 GSLYD----------------L---LHPADDTGKSVDWPR---------RLKI------------AIGAAR-GFAWLHHN 423 (623)
Q Consensus 385 gsL~~----------------~---l~~~~~~~~~l~~~~---------~~~i------------~~~ia~-~l~yLH~~ 423 (623)
..+.. . +|........+.+.. .... ...+.+ .+..++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 88877 1 111111111111110 0000 011222 23333321
Q ss_pred ----CCCCcEecCCCCCceeeC-CCCCeEEeecccccc
Q 006982 424 ----CNPRIIHRNISSKCILLD-DDFEPKISDFGLARL 456 (623)
Q Consensus 424 ----~~~~i~H~dlk~~NILl~-~~~~~kl~Dfgla~~ 456 (623)
....++|+|+.|.||+++ +++.+.|.||+.+..
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 234799999999999999 556668999987753
No 500
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.87 E-value=5.9e-06 Score=57.79 Aligned_cols=37 Identities=32% Similarity=0.658 Sum_probs=33.2
Q ss_pred CCCceeeccCCcCCCCCCcccccccccccccccccccc
Q 006982 153 TYLNSLKLDHNRFSGQIPPQLGQLGRLKSFSVANNLLS 190 (623)
Q Consensus 153 ~~L~~l~l~~N~~~g~iP~~l~~l~~L~~l~l~~N~l~ 190 (623)
++|++|+|++|+++ .+|+.+++|++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 57999999999999 79999999999999999999998
Done!